BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008022
         (581 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/580 (70%), Positives = 492/580 (84%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIEKLG +C++DGVQYLLQQMK+EG+SCSE +FI+VIN+YRRVGLAEQALKMFYRIREFG
Sbjct: 85  MIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFG 144

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +PTVKIYNH+LDA+L+ENRF MI PIYSNMKRDG EPNV+TYNILLKALCKNNRVDGA 
Sbjct: 145 CQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGAC 204

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLLVEM NKGC PD VSYTT++SS+ KLG+VEEAREL++RF   VSVYNALING C+E+K
Sbjct: 205 KLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYK 264

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++E F LL +MV++GIDPNVITYST+ISSL  +GNVE +L +  +MFVRGC+PN+++FTS
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KGY + GR  EA ++WNRM  EGF PNVVAY+TLIHGLCS+G M EAVSVS +ME N 
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C PNV+TY ALIDGFAKAG+L+GAS+IWN+M++NGC PNVV YT MV VLC+++MF QA 
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAW 444

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SLIEKM+ +NCPPNTVTFNTFIKGLC  GRV+ A+ L  QM+QY C PNI TYNE+LDGL
Sbjct: 445 SLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           L+ NR+KEA ELVTE+E+ G++LN+VTYNTI  G C  G   EA +LLGKML+ G K DA
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+N + YAYC QGKV  AIQLLD++  GG+W P++ +YTSLLWGICN  G++EA +YL 
Sbjct: 565 ITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLD 624

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           KMLNEGIC N ATWN LVR LF++LGHLGP++ILDDI+ +
Sbjct: 625 KMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTS 664



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 192/394 (48%), Gaps = 6/394 (1%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y  +I  L +E  ++   +LL +M   GI  +   +  +I++   VG  E +L +  ++ 
Sbjct: 82  YQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIR 141

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             GC P +  +  LL   L   R      +++ M R+G  PNV  Y+ L+  LC N  +D
Sbjct: 142 EFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVD 201

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A  +  +M    C P+V +Y+ +I   +K G +  A ++  R       PNV  Y  ++
Sbjct: 202 GACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNALI 256

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+     +   L+ +M  +   PN +T++T I  L G G V+ A+ +  +M    C 
Sbjct: 257 NGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCS 316

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+  L+ G     RV EA  +   + + G + N+V YNT++HG+C  G + EA  +
Sbjct: 317 PNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSV 376

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             KM   G   +  T+  +I  + K G +  A ++ +++   G   P+++ YTS++  +C
Sbjct: 377 SSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG-CIPNVVVYTSMVNVLC 435

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            S    +A+  ++KM  +   PN  T+N  ++ L
Sbjct: 436 RSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGL 469



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 175/357 (49%), Gaps = 41/357 (11%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           +M V G S +   F S++  Y   G   +AL ++ R+ E G +P V  YN ++  L +  
Sbjct: 309 KMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHG 368

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKA------------------------------ 109
           +      + S M+R+G  PNV TY  L+                                
Sbjct: 369 KMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYT 428

Query: 110 -----LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF--- 161
                LC+++    A+ L+ +M    C P+ V++ T +  +C  G+VE A  L  +    
Sbjct: 429 SMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQY 488

Query: 162 --GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                +  YN +++GL KE++I+EA  L+ EM ++G++ N++TY+TI    C+VG  E +
Sbjct: 489 GCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEA 548

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVAYSTLIH 278
           L +LG+M V G  P+  ++ +L   Y + G+   A  L +++   G ++P V AY++L+ 
Sbjct: 549 LKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLW 608

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           G+C+   ++EAV    +M       N  T++AL+ G   +   LG   I + ++++G
Sbjct: 609 GICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 33/348 (9%)

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           + F    + Y  +I  L     +D    +  QM+      +   +  +I+ + + G    
Sbjct: 73  KAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQ 132

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++ R+   GC P V  Y  ++  +   N F     +   M  +   PN  T+N  +K
Sbjct: 133 ALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLK 192

Query: 384 GLCGCGRVDWAMKLLDQMKQYEC------------------------------LPNITTY 413
            LC   RVD A KLL +M    C                               PN++ Y
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVY 252

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L++G  R  +VKE F L+ ++ + GI  N++TY+T++  +   G V  A  +  KM +
Sbjct: 253 NALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFV 312

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G   +  TF  ++  Y  +G+V  A+ + +R+   G + P++++Y +L+ G+C+ G M 
Sbjct: 313 RGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG-FEPNVVAYNTLIHGLCSHGKMG 371

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYILDDIMAN 580
           EA     KM   G  PN +T+  L+   F+  G L G   I + +M N
Sbjct: 372 EAVSVSSKMERNGCSPNVSTYGALIDG-FAKAGDLVGASEIWNKMMTN 418


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/580 (69%), Positives = 483/580 (83%), Gaps = 1/580 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIEKL  + E+D VQYLLQQMK+EG+SCSE +FISVI SYRR G +EQALK FYR+++F 
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KPTVKIYNHILDALL ENRF MINPIYSNMK+DGMEPNVFTYNILLKALCKNNRVDGA+
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLLVEM +KGC PD VSYTT++SS+CKLG+V+EARELAM F   V VYNALING+CKE+ 
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYT 261

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            EEAF LL EM+++GIDPNVI+Y+TII++L D GNVE SL +L +MF RGC+PN+H+FTS
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KG+ L G +HEA D W+RMIREG +PNVVAY+ L+HGLCS  S+ +AVSV  QME N 
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C PNV TYSALIDG+AKAG+L GAS++WN MI++GC PNVVAYTCMV VLC+N+MF+QA+
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            LIE M  ENCPPNTVTFNTFIKGLCG GRVDWA+K+ DQM    C PN TTYNELLD L
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           L+  R  EAF LV ++E  GI+LN+VTYNTI++G C AGM+ EA +LLGKM++ GTK DA
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT NI+I AYCKQGKVN AIQL+DR+   G+W+PDII+YTSL+ GIC   G++EA +YL+
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRL-SAGKWHPDIIAYTSLISGICTHIGVEEAIVYLR 620

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +ML+EGI PN ATWNVLVR LFSN+GH G V  LD ++ +
Sbjct: 621 RMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGS 660



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 190/395 (48%), Gaps = 6/395 (1%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            Y  +I  L  E +++   +LL +M   GI  +   + ++I S    G+ E +L    +M
Sbjct: 78  TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 P +  +  +L   L   R    + +++ M ++G  PNV  Y+ L+  LC N  +
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A  +  +M    C P+  +Y+ LI    K G +  A     R ++   +P+V  Y  +
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFTPSVPVYNAL 252

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  +C+   F +A  L+++M  +   PN +++ T I  L   G V+ ++ +L +M    C
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ T+  L+ G        EA +    + + G+  N+V YN ++HG+C    + +A  
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +  +M I G   +  T++ +I  Y K G ++ A ++ + +   G  +P++++YT ++  +
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG-CHPNVVAYTCMVDVL 431

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +    +A+  ++ M  E   PN  T+N  ++ L
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 6/300 (2%)

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           + F    + Y  +I  L S   MD    +  QM+      +   + ++I  + +AG+   
Sbjct: 70  KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A + + RM      P V  Y  ++  L   N F   + +   M  +   PN  T+N  +K
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
            LC   RVD A KLL +M    C P+  +Y  L+  L ++ +VKEA EL           
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTP----- 244

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  YN +++GVC+     EAFQLL +M+ +G   + I++  II A    G V  ++ +L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            ++   G  +P++ ++TSL+ G    GG  EA  +  +M+ EG+ PN   +N L+  L S
Sbjct: 305 AKMFARG-CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  843 bits (2178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/575 (69%), Positives = 480/575 (83%), Gaps = 1/575 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIEKL  + E+D VQYLLQQMK+EG+SCSE +FISVI SYRR G +EQALK FYR+++F 
Sbjct: 82  MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFR 141

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KPTVKIYNHILDALL ENRF MINPIYSNMK+DGMEPNVFTYNILLKALCKNNRVDGA+
Sbjct: 142 VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAH 201

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLLVEM +KGC PD VSYTT++SS+CKLG+V+EARELAM F   V VYNALING+CKE+ 
Sbjct: 202 KLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYT 261

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            EEAF LL EM+++GIDPNVI+Y+TII++L D GNVE SL +L +MF RGC+PN+H+FTS
Sbjct: 262 FEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTS 321

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KG+ L G +HEA D W+RMIREG +PNVVAY+ L+HGLCS  S+ +AVSV  QME N 
Sbjct: 322 LIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING 381

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C PNV TYSALIDG+AKAG+L GAS++WN MI++GC PNVVAYTCMV VLC+N+MF+QA+
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            LIE M  ENCPPNTVTFNTFIKGLCG GRVDWA+K+ DQM    C PN TTYNELLD L
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           L+  R  EAF LV ++E  GI+LN+VTYNTI++G C AGM+ EA +LLGKM++ GTK DA
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT NI+I AYCKQGKVN AIQL+DR+   G+W+PDII+YTSL+ GIC   G++EA +YL+
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRL-SAGKWHPDIIAYTSLISGICTHIGVEEAIVYLR 620

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
           +ML+EGI PN ATWNVLVR LFSN+GH G V  LD
Sbjct: 621 RMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 190/395 (48%), Gaps = 6/395 (1%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            Y  +I  L  E +++   +LL +M   GI  +   + ++I S    G+ E +L    +M
Sbjct: 78  TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 P +  +  +L   L   R    + +++ M ++G  PNV  Y+ L+  LC N  +
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A  +  +M    C P+  +Y+ LI    K G +  A     R ++   +P+V  Y  +
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFTPSVPVYNAL 252

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  +C+   F +A  L+++M  +   PN +++ T I  L   G V+ ++ +L +M    C
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ T+  L+ G        EA +    + + G+  N+V YN ++HG+C    + +A  
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +  +M I G   +  T++ +I  Y K G ++ A ++ + +   G  +P++++YT ++  +
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG-CHPNVVAYTCMVDVL 431

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +    +A+  ++ M  E   PN  T+N  ++ L
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 6/300 (2%)

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           + F    + Y  +I  L S   MD    +  QM+      +   + ++I  + +AG+   
Sbjct: 70  KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A + + RM      P V  Y  ++  L   N F   + +   M  +   PN  T+N  +K
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
            LC   RVD A KLL +M    C P+  +Y  L+  L ++ +VKEA EL           
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTP----- 244

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  YN +++GVC+     EAFQLL +M+ +G   + I++  II A    G V  ++ +L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            ++   G  +P++ ++TSL+ G    GG  EA  +  +M+ EG+ PN   +N L+  L S
Sbjct: 305 AKMFARG-CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/580 (67%), Positives = 477/580 (82%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI++LG + +IDG+QYLLQ MK+EG+SC+E +F+ VIN+YRR GLAEQALK FYRI EFG
Sbjct: 79  MIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFG 138

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP+VKIYNH+LDALL+EN+F MIN IY+NMKRDG+E NV+TYN+LLKALCKN+RVD A 
Sbjct: 139 CKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAAR 198

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLL EM  KGC PDAVSYTT+VSS+C+LG+VEEAREL+MR  S V VYNALING C+EHK
Sbjct: 199 KLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHK 258

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +EE F L  EM   GIDP+VITYST+I++L ++GNVE +L +L +MF+RGC+PN+H+FTS
Sbjct: 259 MEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTS 318

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KGY +GGR  EA DLWNRMI+EG  PN VAY+TLIHGLCS G M EAVSVS +ME N 
Sbjct: 319 LMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNG 378

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN TTYS LIDGFAKAG+L+GAS+IWN+MI+NGC PNVV YTCMV VLC+N+MF+ A 
Sbjct: 379 VFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHAL 438

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            LIE MA  NCPPNT+TFNTFIKGLC  G+ +WAMK+L+QM+QY C PN+TTYNE+LDGL
Sbjct: 439 HLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGL 498

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
               R +EA ++V EIE+  I+ N+VTYNTIL G C AGM   A Q+ GK+L+ GTK D+
Sbjct: 499 FNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDS 558

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+N +IYAYCKQG+V  AIQL+DR+   GE  PD+ +YTSLLWG+CN  G+ EA ++L 
Sbjct: 559 ITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLD 618

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           KM+NEGICPN ATWN LVR LFS LGHLGP++I+D+I+AN
Sbjct: 619 KMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNILAN 658



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 196/427 (45%), Gaps = 31/427 (7%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            Y  +I  L  E  I+   +LL  M   GI  N   +  +I++    G  E +L    ++
Sbjct: 75  TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRI 134

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              GC P++  +  +L   L   +    + ++N M R+G   NV  Y+ L+  LC N  +
Sbjct: 135 GEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRV 194

Query: 287 DEAVSVSYQMEENSCPPN------------------------------VTTYSALIDGFA 316
           D A  +  +M    C P+                              V  Y+ALI+GF 
Sbjct: 195 DAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFC 254

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           +   +    +++N M   G  P+V+ Y+ ++  L +      A +++ KM    C PN  
Sbjct: 255 REHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVH 314

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           TF + +KG    GR+  A+ L ++M Q    PN   YN L+ GL    ++ EA  +  ++
Sbjct: 315 TFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKM 374

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ G+  N  TY+T++ G  +AG +V A ++  KM+  G   + + +  ++   C+    
Sbjct: 375 ERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMF 434

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           N+A+ L++ +   G   P+ I++ + + G+C SG  + A   L +M   G  PN  T+N 
Sbjct: 435 NHALHLIENM-ANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNE 493

Query: 557 LVRSLFS 563
           ++  LF+
Sbjct: 494 VLDGLFN 500



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 168/326 (51%), Gaps = 8/326 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  EG   +   + ++I+     G   +A+ +  ++   G+ P    Y+ ++D   
Sbjct: 335 LWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFA 394

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                   + I++ M  +G  PNV  Y  ++  LC+N+  + A  L+  M N  C P+ +
Sbjct: 395 KAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTI 454

Query: 137 SYTTIVSSICKLGQVEEAREL--AMR-FG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ T +  +C  G+ E A ++   MR +G    V+ YN +++GL    +  EA  ++ E+
Sbjct: 455 TFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  I  N++TY+TI+S  C  G  + +L I G++ V G  P+  ++ +++  Y   G  
Sbjct: 515 EEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEV 574

Query: 252 HEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             A  L +R+ ++G   P+V  Y++L+ G+C+   +DEAV    +M      PN  T++A
Sbjct: 575 KTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNA 634

Query: 311 LIDG-FAKAGNLLGASQIWNRMISNG 335
           L+ G F+K G+ LG   I + +++NG
Sbjct: 635 LVRGLFSKLGH-LGPIHIVDNILANG 659



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 176/391 (45%), Gaps = 31/391 (7%)

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY+T+I  L    +++    +L  M + G + N   F  ++  Y   G   +A   + R
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           +   G  P+V  Y+ ++  L S         +   M+ +    NV TY+ L+    K   
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ------------------------NNMF 356
           +  A ++   M   GC P+ V+YT +V  +C+                         N F
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGF 253

Query: 357 HQAHSLIE------KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            + H + E      +MA E   P+ +T++T I  L   G V+ A+ +L +M    C PN+
Sbjct: 254 CREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNV 313

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            T+  L+ G     R+ EA +L   + + G + N V YNT++HG+C  G +VEA  +  K
Sbjct: 314 HTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQK 373

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G   +  T++ +I  + K G +  A ++ +++   G   P+++ YT ++  +C + 
Sbjct: 374 MERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL-PNVVVYTCMVDVLCRNS 432

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               A   ++ M N    PN  T+N  ++ L
Sbjct: 433 MFNHALHLIENMANGNCPPNTITFNTFIKGL 463



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 159/347 (45%), Gaps = 35/347 (10%)

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           F    + Y+T+I  L     +D    +   M+      N   +  +I+ + +AG    A 
Sbjct: 69  FKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQAL 128

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           + + R+   GC P+V  Y  ++  L   N F   + +   M  +    N  T+N  +K L
Sbjct: 129 KTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKAL 188

Query: 386 CGCGRVDWAMKLLDQMKQYECLPN------------------------------ITTYNE 415
           C   RVD A KLL +M    C+P+                              +  YN 
Sbjct: 189 CKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNA 248

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++G  R ++++E FEL  E+   GI  +++TY+T+++ +   G V  A  +L KM + G
Sbjct: 249 LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRG 308

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQE 534
              +  TF  ++  Y   G++  A+ L +R I+ G E  P+ ++Y +L+ G+C+ G M E
Sbjct: 309 CSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSE--PNTVAYNTLIHGLCSYGKMVE 366

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYILDDIMAN 580
           A    QKM   G+ PN  T++ L+   F+  G L G   I + ++ N
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDG-FAKAGDLVGASEIWNKMITN 412



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 8/266 (3%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           N+   S +++      N+L A   +  +  SN      + YT M+K L           L
Sbjct: 36  NLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYL 95

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           ++ M  E    N   F   I      G  + A+K   ++ ++ C P++  YN +LD LL 
Sbjct: 96  LQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLS 155

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            N+ +    +   +++ GI+LN+ TYN +L  +C+   V  A +LL +M  +G   DA++
Sbjct: 156 ENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVS 215

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  ++ + C+ GKV  A +L  RI+        +  Y +L+ G C    M+E F    +M
Sbjct: 216 YTTVVSSMCRLGKVEEARELSMRIKSF------VPVYNALINGFCREHKMEEVFELFNEM 269

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
             EGI P+  T++ ++ +L S +G++
Sbjct: 270 AVEGIDPDVITYSTVINTL-SEMGNV 294



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 6/264 (2%)

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           NS      TY+ +I       ++ G   +   M   G S N   +  ++    +  +  Q
Sbjct: 67  NSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQ 126

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A     ++    C P+   +N  +  L    +      + + MK+     N+ TYN LL 
Sbjct: 127 ALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLK 186

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L + +RV  A +L+ E+   G   + V+Y T++  +CR G V EA +L  ++     K 
Sbjct: 187 ALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRI-----KS 241

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
               +N +I  +C++ K+    +L + +   G  +PD+I+Y++++  +   G ++ A   
Sbjct: 242 FVPVYNALINGFCREHKMEEVFELFNEMAVEG-IDPDVITYSTVINTLSEMGNVEMALAV 300

Query: 539 LQKMLNEGICPNFATWNVLVRSLF 562
           L KM   G  PN  T+  L++  F
Sbjct: 301 LAKMFLRGCSPNVHTFTSLMKGYF 324


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/578 (65%), Positives = 474/578 (82%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIE+LG +CE+D VQY+LQQMK++G++C E +FI +IN Y+RVG AEQALKMFYRI EFG
Sbjct: 80  MIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG 139

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KPTV+IYNH+LDALL+EN+F MINP+Y+NMK+DG+ PNVFTYNILLKALCKN+RVD A+
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAH 199

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL VEM NKGC PDAV+YTT+VSS+CK G++++ARELA RF   V VYNALI+G+CKE +
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGR 259

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           IE A  LL EM+D G+DPNV++YS II+SLC  GNVE +  +  QMF+RGC+ NIH+FT 
Sbjct: 260 IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP 319

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KG  + G+ +EA DLW  MI++G  PNVVAY+TLIHGLCSNGS++EA+ V  QM+ + 
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C PNVTTYS LIDGFAK+G+L+GAS+ WNRMIS+GC PNVV YTCMV VLC+N+MF QA+
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQAN 439

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL+EKM  E C PNT+TFNTFIKGLCG GRV+WAMKLL++M+ + CLPNITTYNELLD L
Sbjct: 440 SLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R+N+ +EAF L  EIE   +Q N+VTYNT+L+G  RAGM+ EA QL GK L+ GT  D+
Sbjct: 500 FRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+N +I+AYCKQGKV  A QL++R+    EW+PDII+YTSL+WG CN   ++EA  +L 
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           K +N+GICPNFATWN LVR  F +LGH+GP++ILDDI+
Sbjct: 620 KAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDIL 657



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 221/474 (46%), Gaps = 67/474 (14%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F    S Y  +I  L +E +++   ++L +M   GI+     +  II+    VG+ E +L
Sbjct: 70  FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQAL 129

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  ++   GC P +  +  LL   L   +    + L+  M ++G +PNV  Y+ L+  L
Sbjct: 130 KMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKAL 189

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYS------------------------------A 310
           C N  +D A  +  +M    CPP+  TY+                              A
Sbjct: 190 CKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNA 249

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN-----------NMF--- 356
           LIDG  K G +  A ++   M+ NG  PNVV+Y+C++  LC +            MF   
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 357 ---------------------HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
                                ++A  L + M  + C PN V +NT I GLC  G ++ A+
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++ DQM++  CLPN+TTY+ L+DG  +   +  A E    +   G + N+VTY  ++  +
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+  M  +A  L+ KM +EG   + ITFN  I   C  G+V  A++LL+R++G G   P+
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCL-PN 488

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           I +Y  LL  +      +EAF   Q++    + PN  T+N ++   FS  G +G
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG-FSRAGMMG 541



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 157/298 (52%), Gaps = 6/298 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E+AL++  +++  G  P V  Y+ ++D           +  ++ M   G  PNV TY
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-G 162
             ++  LCKN+  D A  L+ +M  +GC P+ +++ T +  +C  G+VE A +L  R  G
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 163 SG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G    ++ YN L++ L + +K EEAF L  E+  R + PN++TY+T++      G +  
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR-EGFLPNVVAYSTLI 277
           +L + G+  VRG  P+  ++ +++  Y   G+   A+ L  R+   + + P+++ Y++LI
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            G C+  +++EA++   +       PN  T++AL+  F  +   +G   I + ++  G
Sbjct: 603 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 6/229 (2%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           SN        Y  M++ L +         ++++M  +        F   I G    G  +
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+K+  ++ ++ C P +  YN LLD LL  N+ +    L T ++K G+  N+ TYN +L
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C+   V  A +L  +M  +G   DA+T+  ++ + CK GK+++A +L       G +
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------AGRF 240

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            P +  Y +L+ G+C  G ++ A   L +M++ G+ PN  +++ ++ SL
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 6/264 (2%)

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           N+     +TY  +I+   +   +     I  +M  +G +     + C++    +     Q
Sbjct: 68  NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  +  ++    C P    +N  +  L    +      L   MK+   +PN+ TYN LL 
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L + +RV  A +L  E+   G   + VTY T++  +C+AG + +A +L G+      K 
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KP 242

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
               +N +I   CK+G++  AI+LL  +   G  +P+++SY+ ++  +C SG ++ AF  
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV-DPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 539 LQKMLNEGICPNFATWNVLVRSLF 562
             +M   G   N  T+  L++  F
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCF 325


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/578 (65%), Positives = 474/578 (82%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIE+LG +CE+D VQY+LQQMK++G++C E +FI +IN Y+RVG AEQALKMFYRI EFG
Sbjct: 80  MIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFG 139

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KPTV+IYNH+LDALL+EN+F MINP+Y+NMK+DG+ PNVFTYNILLKALCKN+RVD A+
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAH 199

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL VEM NKGC PDAV+YTT+VSS+CK G++++ARELA RF   V VYNALI+G+CKE +
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGR 259

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           IE A  LL EM+D G+DPNV++YS II+SLC  GNVE +  +  QMF+RGC+ NIH+FT 
Sbjct: 260 IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP 319

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KG  + G+ +EA DLW  MI++G  PNVVAY+TLIHGLCSNGS++EA+ V  QM+ + 
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C PNVTTYS LIDGFAK+G+L+GAS+ WNRMIS+GC PNVV YTCMV VLC+N+MF QA+
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQAN 439

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL+EKM  E C PNT+TFNTFIKGLCG GRV+WAMKLL++M+ + CLPNITTYNELLD L
Sbjct: 440 SLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDAL 499

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R+N+ +EAF L  EIE   +Q N+VTYNT+L+G  RAGM+ EA QL GK L+ GT  D+
Sbjct: 500 FRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+N +I+AYCKQGKV  A QL++R+    EW+PDII+YTSL+WG CN   ++EA  +L 
Sbjct: 560 ITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLD 619

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           K +N+GICPNFATWN LVR  F +LGH+GP++ILDDI+
Sbjct: 620 KAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDIL 657



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 221/474 (46%), Gaps = 67/474 (14%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F    S Y  +I  L +E +++   ++L +M   GI+     +  II+    VG+ E +L
Sbjct: 70  FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQAL 129

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  ++   GC P +  +  LL   L   +    + L+  M ++G +PNV  Y+ L+  L
Sbjct: 130 KMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKAL 189

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYS------------------------------A 310
           C N  +D A  +  +M    CPP+  TY+                              A
Sbjct: 190 CKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNA 249

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN-----------NMF--- 356
           LIDG  K G +  A ++   M+ NG  PNVV+Y+C++  LC +            MF   
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 357 ---------------------HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
                                ++A  L + M  + C PN V +NT I GLC  G ++ A+
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++ DQM++  CLPN+TTY+ L+DG  +   +  A E    +   G + N+VTY  ++  +
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+  M  +A  L+ KM +EG   + +TFN  I   C  G+V  A++LL+R++G G   P+
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCL-PN 488

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           I +Y  LL  +      +EAF   Q++    + PN  T+N ++   FS  G +G
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYG-FSRAGMMG 541



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 157/298 (52%), Gaps = 6/298 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E+AL++  +++  G  P V  Y+ ++D           +  ++ M   G  PNV TY
Sbjct: 363 GSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTY 422

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-G 162
             ++  LCKN+  D A  L+ +M  +GC P+ +++ T +  +C  G+VE A +L  R  G
Sbjct: 423 TCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQG 482

Query: 163 SG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G    ++ YN L++ L + +K EEAF L  E+  R + PN++TY+T++      G +  
Sbjct: 483 HGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGE 542

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR-EGFLPNVVAYSTLI 277
           +L + G+  VRG  P+  ++ +++  Y   G+   A+ L  R+   + + P+++ Y++LI
Sbjct: 543 ALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLI 602

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            G C+  +++EA++   +       PN  T++AL+  F  +   +G   I + ++  G
Sbjct: 603 WGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 6/229 (2%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           SN        Y  M++ L +         ++++M  +        F   I G    G  +
Sbjct: 67  SNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAE 126

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+K+  ++ ++ C P +  YN LLD LL  N+ +    L T ++K G+  N+ TYN +L
Sbjct: 127 QALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILL 186

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C+   V  A +L  +M  +G   DA+T+  ++ + CK GK+++A +L       G +
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL------AGRF 240

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            P +  Y +L+ G+C  G ++ A   L +M++ G+ PN  +++ ++ SL
Sbjct: 241 KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 6/264 (2%)

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           N+     +TY  +I+   +   +     I  +M  +G +     + C++    +     Q
Sbjct: 68  NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ 127

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  +  ++    C P    +N  +  L    +      L   MK+   +PN+ TYN LL 
Sbjct: 128 ALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLK 187

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L + +RV  A +L  E+   G   + VTY T++  +C+AG + +A +L G+      K 
Sbjct: 188 ALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KP 242

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
               +N +I   CK+G++  AI+LL  +   G  +P+++SY+ ++  +C SG ++ AF  
Sbjct: 243 SVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV-DPNVVSYSCIINSLCVSGNVELAFAL 301

Query: 539 LQKMLNEGICPNFATWNVLVRSLF 562
             +M   G   N  T+  L++  F
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCF 325


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/579 (62%), Positives = 449/579 (77%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+KLG   E+DGV YLLQQMK+E V CS+ +F  VI  YRR  L EQ LKMFYRIREFG
Sbjct: 80  MIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFG 139

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P+VKIYN +LDALL++N F MIN +Y+NMK +G+EPNVFTYN+LLKALC+N +VDGA 
Sbjct: 140 CEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGAC 199

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLLVEM NKGC PD VSYTT++SS+CKLG V++ARELAM+F   V VYNALI+G+CKE +
Sbjct: 200 KLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECR 259

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            +EAF L+ EMVDRG+DPNVI+YST+IS L D+GNVE SL + G+MFVRGC PN+ +FTS
Sbjct: 260 FKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTS 319

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KG+ + GR  +A  LWN MIREG  PNVVAY+TLIHGLCS+G+MDEA+SV  QME++S
Sbjct: 320 LIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDS 379

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNVTTYS +I GFAK+G+L+ A + WN+MI+ GC PNVV YTCMV VLCQ +MF QA 
Sbjct: 380 IRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAF 439

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            LI+ M  + CPP  +TFN FIKGLC  GRV+WAM +LDQM++YECLPNI TYNELLDGL
Sbjct: 440 DLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGL 499

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R N  +EA  L+ E+E+  ++ + VTYNTI++G    GM  +  QLLGKML+ G KLD 
Sbjct: 500 FRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDT 559

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT N  + AYCK GKV  AI++LD I    E+  DII++T +LWGICN  G +EA +YL 
Sbjct: 560 ITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLH 619

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           +ML  GI PN ATWNVLVR  FS LGH+GP+ ILDDI+ 
Sbjct: 620 EMLKRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDIIG 658



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/422 (22%), Positives = 190/422 (45%), Gaps = 32/422 (7%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNV-ITYSTIISSLCDVGNVETSLGILGQMFVR 229
           ++  L +EH I  +      + + G   +  +TY T+I  L     ++    +L QM + 
Sbjct: 44  VVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
               +   F  ++K Y       +   ++ R+   G  P+V  Y+ ++  L S       
Sbjct: 104 NVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
            ++   M+     PNV TY+ L+    + G + GA ++   M + GC P+ V+YT ++  
Sbjct: 164 NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223

Query: 350 LCQ---------------------NNMFH---------QAHSLIEKMAFENCPPNTVTFN 379
           +C+                     N + H         +A  L+ +M      PN ++++
Sbjct: 224 MCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYS 283

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I  L   G V+ ++ +  +M    C PN+ T+  L+ G     RV +A  L   + + 
Sbjct: 284 TVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIRE 343

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G+  N+V YNT++HG+C  G + EA  +  +M  +  + +  T++ IIY + K G + +A
Sbjct: 344 GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSA 403

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +  +++   G   P+++ YT ++  +C      +AF  +  M+++G  P   T+N  ++
Sbjct: 404 CETWNKMINCG-CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIK 462

Query: 560 SL 561
            L
Sbjct: 463 GL 464



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 138/271 (50%), Gaps = 11/271 (4%)

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV-VAYTCMVKVLCQNNMFH 357
           N CP    + S ++    +  +++ + + +  + ++G   +  + Y  M+  L +NN   
Sbjct: 35  NVCP---VSESHVVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMD 91

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
               L+++M  EN P +   F   IK        +  +K+  +++++ C P++  YN +L
Sbjct: 92  GVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVL 151

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D LL  N  K    L   ++  G++ N+ TYN +L  +C+ G V  A +LL +M  +G  
Sbjct: 152 DALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCD 211

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D +++  +I + CK G V+ A +L        ++ P +  Y +L+ G+C     +EAF 
Sbjct: 212 PDDVSYTTVISSMCKLGDVDKAREL------AMKFEPVVPVYNALIHGVCKECRFKEAFD 265

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            + +M++ G+ PN  +++ ++ S  S++G++
Sbjct: 266 LMNEMVDRGVDPNVISYSTVI-SCLSDMGNV 295


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/584 (60%), Positives = 448/584 (76%), Gaps = 5/584 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIEKLG   E+D + Y+L QMK+E + CS+  FI V+NSY+  GL ++ALKMFYRI+EFG
Sbjct: 79  MIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFG 138

Query: 61  LKPTVKIYNHILDALLAE--NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            KPTVKIYNH+LDALL E  N+F MI  +Y NM+ +GMEPNVFTYN+LLKALCKN ++DG
Sbjct: 139 CKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDG 198

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG--VSVYNALINGLC 176
           A KLLVEM  +GC PD VSYTT+V+++C+ G+VEEARE+A RFG+   VSV NALI GLC
Sbjct: 199 ACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLC 258

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +E ++ E F L+ EMV  G+DPNV++YS++IS L DVG VE +L +LG+M  RGC PN+H
Sbjct: 259 REGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVH 318

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F+SL+KGY LGGR  E   LW  M+ EG  PNVV Y+TL++GLC +G++ EAV V  +M
Sbjct: 319 TFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM 378

Query: 297 EENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           E++  C PNVTTYS L+ GF KAG+L GAS++WN+M++ G  PNVV YT MV VLC+N+M
Sbjct: 379 EKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSM 438

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F QA+ LI+ MA + CPP  VTFNTFIKGLC  GRV WAM+++DQM++Y CLP+  TYNE
Sbjct: 439 FDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNE 498

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           LLDGL  VN +KEA EL+ E+E+  ++LN+VTYNT+++G    G      Q+LG+ML+ G
Sbjct: 499 LLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNG 558

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            K DAIT N++IYAY K GKV  AIQ LDRI  G E  PDII++TSLLWGICNS G++EA
Sbjct: 559 VKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEA 618

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
            +YL KMLN+GI PN ATW+VLVR  F  LGH+GP+ ILDDI+ 
Sbjct: 619 IVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILG 662



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 167/326 (51%), Gaps = 7/326 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDAL 75
           L + M +EGV  +  V+ +++N     G   +A+ +  R+ ++   +P V  Y+ ++   
Sbjct: 339 LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGF 398

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +        + +++ M   G+ PNV  Y  ++  LCKN+  D AY+L+  M   GC P  
Sbjct: 399 VKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTV 458

Query: 136 VSYTTIVSSICKLGQVEEARELA---MRFG--SGVSVYNALINGLCKEHKIEEAFWLLCE 190
           V++ T +  +C  G+V  A  +     R+G       YN L++GL   ++++EA  L+ E
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           + +R ++ N++TY+T++      G  E  L +LG+M V G  P+  +   ++  Y   G+
Sbjct: 519 LEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGK 578

Query: 251 THEASDLWNRMIR-EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              A    +R+   +   P+++A+++L+ G+C++  ++EA+    +M      PN+ T+ 
Sbjct: 579 VRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWD 638

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNG 335
            L+ GF K    +G  +I + ++  G
Sbjct: 639 VLVRGFFKKLGHMGPIRILDDILGKG 664



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 46/337 (13%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
            F    + Y  +I  L  N  +D    + +QM+    P +  ++  +++ +  +G    A
Sbjct: 68  AFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRA 127

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLC--QNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            +++ R+   GC P V  Y  ++  L     N FH   ++ E M  E   PN  T+N  +
Sbjct: 128 LKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLL 187

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTY----------------------------- 413
           K LC  G++D A KLL +M +  C+P+  +Y                             
Sbjct: 188 KALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVV 247

Query: 414 ---NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
              N L+ GL R  RV E F L+ E+   G+  N+V+Y++++  +   G V  A  +LGK
Sbjct: 248 SVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGK 307

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-----LDRIRGGGEWNPDIISYTSLLWG 525
           M+  G + +  TF+ ++  Y   G+V   + L     L+ +R      P+++ Y +LL G
Sbjct: 308 MIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVR------PNVVVYNTLLNG 361

Query: 526 ICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
           +C SG + EA     +M  +  C PN  T++ LV   
Sbjct: 362 LCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGF 398



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 9/231 (3%)

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + Y  M++ L +N+     H ++ +M  E  P +  +F   +      G  D A+K+  +
Sbjct: 74  LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYR 133

Query: 401 MKQYECLPNITTYNELLDGLL--RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           +K++ C P +  YN LLD LL    N+      +   +   G++ N+ TYN +L  +C+ 
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKN 193

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G +  A +LL +M   G   D +++  ++ A C+ G+V  A ++  R    G     ++S
Sbjct: 194 GKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEG-----VVS 248

Query: 519 Y-TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
              +L+ G+C  G + E F  + +M+  G+ PN  +++ ++ S  S++G +
Sbjct: 249 VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVI-SWLSDVGEV 298


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/581 (57%), Positives = 432/581 (74%), Gaps = 14/581 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI KL    ++D VQYLLQQMK++G  CSE +FISVI+ YR+VGLAE+A++MFYRI+EFG
Sbjct: 82  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+VKIYNH+LD LL ENR  MI  +Y +MKRDG EPNVFTYN+LLKALCKNN+VDGA 
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLLVEM NKGC PDAVSYTT++SS+C++G V+E RELA RF   VSVYNALINGLCKEH 
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            + AF L+ EMV++GI PNVI+YST+I+ LC+ G +E +   L QM  RGC+PNI++ +S
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321

Query: 241 LLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           L+KG  L G T +A DLWN+MIR  G  PNVVAY+TL+ G CS+G++ +AVSV   MEE 
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C PN+ TY +LI+GFAK G+L GA  IWN+M+++GC PNVV YT MV+ LC+++ F +A
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLD 418
            SLIE M+ ENC P+  TFN FIKGLC  GR+DWA K+  QM +Q+ C PNI TYNELLD
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL + NR++EA+ L  EI   G++ +  TYNT+LHG C AG+   A QL+GKM+++G   
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           D IT N+II AYCKQGK   A Q+LD +  G  +W PD+ISYT+++WG+C S   ++  I
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 621

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
            L++M++ GI P+ ATW+VL+             +ILDDI+
Sbjct: 622 LLERMISAGIVPSIATWSVLIN-----------CFILDDIV 651



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 192/395 (48%), Gaps = 7/395 (1%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +  +I  L  + +++   +LL +M  +G   +   + ++IS    VG  E ++ +  ++ 
Sbjct: 79  FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIK 138

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             GC+P++  +  +L   L   R      ++  M R+GF PNV  Y+ L+  LC N  +D
Sbjct: 139 EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVD 198

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A  +  +M    C P+  +Y+ +I    + G +    ++  R       P V  Y  ++
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALI 253

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+ + +  A  L+ +M  +   PN ++++T I  LC  G+++ A   L QM +  C 
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           PNI T + L+ G        +A +L  + I   G+Q N+V YNT++ G C  G +V+A  
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVS 373

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +   M   G   +  T+  +I  + K+G ++ A+ + +++   G   P+++ YT+++  +
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG-CCPNVVVYTNMVEAL 432

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C     +EA   ++ M  E   P+  T+N  ++ L
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 176/345 (51%), Gaps = 7/345 (2%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F  +++   + G+      L  +M  +GF  +   + ++I      G  + AV + Y++
Sbjct: 78  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +E  C P+V  Y+ ++D       +     ++  M  +G  PNV  Y  ++K LC+NN  
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  L+ +M+ + C P+ V++ T I  +C  G V    +L ++ +     P ++ YN L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNAL 252

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++GL + +  K AFEL+ E+ + GI  N+++Y+T+++ +C +G +  AF  L +ML  G 
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T + ++     +G   +A+ L +++  G    P++++Y +L+ G C+ G + +A 
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYILDDIMAN 580
                M   G  PN  T+  L+   F+  G L G VYI + ++ +
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLING-FAKRGSLDGAVYIWNKMLTS 416



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 123/251 (49%), Gaps = 29/251 (11%)

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + +  M++ L  +        L+++M  +    +   F + I      G  + A+++  +
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           +K++ C P++  YN +LD LL  NR++  + +  ++++ G + N+ TYN +L  +C+   
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-------------- 506
           V  A +LL +M  +G   DA+++  +I + C+ G V    +L +R               
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256

Query: 507 ------RGGGEW---------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
                 +G  E          +P++ISY++L+  +CNSG ++ AF +L +ML  G  PN 
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316

Query: 552 ATWNVLVRSLF 562
            T + LV+  F
Sbjct: 317 YTLSSLVKGCF 327


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/552 (57%), Positives = 413/552 (74%), Gaps = 3/552 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI KL    ++D VQYLLQQMK++G  CSE +FISVI+ YR+VGLAE+A++MFYRI+EFG
Sbjct: 81  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 140

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+VKIYNH+LD LL ENR  MI  +Y +MKRDG EPNVFTYN+LLKALCKNN+VDGA 
Sbjct: 141 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 200

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLLVEM NKGC P+AVSYTT++SS+C++G V+E R+LA RF   VSVYNALINGLCKE  
Sbjct: 201 KLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERD 260

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            +    L+ EMV++GI PNVI+YST+I+ L + G +E +  +L QM  RGC+PNIH+ +S
Sbjct: 261 YKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSS 320

Query: 241 LLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           L+KG  + G T +A D+WN+MIR  G  PNVVAY+TL+ G CS+G++D+AVSV   MEE 
Sbjct: 321 LVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEI 380

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C PN+ TY +LI+GF K G+L GA  IWN+M+++GC PNVV YT MV+ LC+++ F +A
Sbjct: 381 GCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEA 440

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLD 418
            SLIE M+ ENC P+  TFN FIKGLC  GR+DWA K+  QM +QY C PNI TYNELLD
Sbjct: 441 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLD 500

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL + NR++EA+ L  EI   G++ +  TYNT+LHG C AG+   A QL+GKM++ G   
Sbjct: 501 GLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSP 560

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           D IT N+II AYCKQGK   A+Q+LD +  G  +W PD+ISYT+++WG+C S   ++  I
Sbjct: 561 DEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVI 620

Query: 538 YLQKMLNEGICP 549
             ++M++E I P
Sbjct: 621 LFERMISERIIP 632



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 200/430 (46%), Gaps = 17/430 (3%)

Query: 143 SSICKLGQVEEARELAMRFGSGVS----------VYNALINGLCKEHKIEEAFWLLCEMV 192
           S++ K  + E    LA+ F   ++           +  +I  L  + +++   +LL +M 
Sbjct: 43  SAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK 102

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            +G   +   + ++IS    VG  E ++ +  ++   GC+P++  +  +L   L   R  
Sbjct: 103 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 162

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
               ++  M R+GF PNV  Y+ L+  LC N  +D A  +  +M    C PN  +Y+ +I
Sbjct: 163 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVI 222

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
               + G +    Q+  R       P V  Y  ++  LC+   +     L+ +M  +   
Sbjct: 223 SSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGIS 277

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN ++++T I  L   G+++ A  LL QM +  C PNI T + L+ G        +A ++
Sbjct: 278 PNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDM 337

Query: 433 VTE-IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
             + I   G+Q N+V YNT++ G C  G + +A  +   M   G   +  T+  +I  + 
Sbjct: 338 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFT 397

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+G +  A+ + +++   G   P+++ YTS++  +C     +EA   ++ M  E   P+ 
Sbjct: 398 KRGSLEGAVYIWNKMLTSG-CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSV 456

Query: 552 ATWNVLVRSL 561
            T+N  ++ L
Sbjct: 457 PTFNAFIKGL 466



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 174/345 (50%), Gaps = 7/345 (2%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F  +++   + G+      L  +M  +GF  +   + ++I      G  + AV + Y++
Sbjct: 77  TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 136

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +E  C P+V  Y+ ++D       +     ++  M  +G  PNV  Y  ++K LC+NN  
Sbjct: 137 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 196

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  L+ +M+ + C PN V++ T I  +C  G V    +L ++ +     P ++ YN L
Sbjct: 197 DGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNAL 251

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++GL +    K   EL++E+ + GI  N+++Y+T+++ +  +G +  AF LL +ML  G 
Sbjct: 252 INGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGC 311

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T + ++     +G   +A+ + +++  G    P++++Y +L+ G C+ G + +A 
Sbjct: 312 HPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAV 371

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYILDDIMAN 580
                M   G  PN  T+  L+   F+  G L G VYI + ++ +
Sbjct: 372 SVFLHMEEIGCSPNIRTYGSLING-FTKRGSLEGAVYIWNKMLTS 415



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 122/251 (48%), Gaps = 29/251 (11%)

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + +  M++ L  +        L+++M  +    +   F + I      G  + A+++  +
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           +K++ C P++  YN +LD LL  NR++  + +  ++++ G + N+ TYN +L  +C+   
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-------------- 506
           V  A +LL +M  +G   +A+++  +I + C+ G V    QL +R               
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGL 255

Query: 507 ------RGGGEW---------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
                 +GG E          +P++ISY++L+  + NSG ++ AF  L +ML  G  PN 
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315

Query: 552 ATWNVLVRSLF 562
            T + LV+  F
Sbjct: 316 HTLSSLVKGCF 326


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 275/581 (47%), Positives = 396/581 (68%), Gaps = 6/581 (1%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           + +L    ++DGVQY LQ+M++ GV+C+E   ++ I ++ R G A++ALK FYR  + G 
Sbjct: 58  VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117

Query: 62  K-PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V++YNH+LDALL EN    + P+Y NM++ G++PNV+TYN+L++ALC+N+RVD A 
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K+L EM  KGC PD VS+ TIVS +CKLG+VEEAR          + YNA+++ LC E +
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFR 237

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           + E F ++ EMV RG+ PNV+TY+TI+ + C    +  +  IL +M   GC PN+ +FT+
Sbjct: 238 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 297

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KG+   G+ H+A  +W+ M+ EG+ P+ ++Y+ LI GLC  G +  A+     M+ N+
Sbjct: 298 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNA 357

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN TTYS L+DGF+ AG+L GA  IWN M S+GC PNVV YT M+ VLC+  MF QA 
Sbjct: 358 LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAE 417

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SLI+KM  +NCPPNTVTFNT I  LC CGRV  A+ +   M++  C PN  TYNELL GL
Sbjct: 418 SLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGL 477

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R    K+AF +V E+   G +L++VTYNT+++ +C+  M   A  LLG+M+++G + DA
Sbjct: 478 FREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDA 537

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            TFN II+AYCK+GKV+ A  LL ++        ++++YT L+  +CN G +  A +YL 
Sbjct: 538 FTFNAIIHAYCKEGKVSIAACLLGQM-NAVNCPRNVVAYTILISELCNQGKLSNAMVYLL 596

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPV----YILDDI 577
           KML EGICPN ATWNVLVR++F+N+G +GP+    YI++D+
Sbjct: 597 KMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFKYIVEDL 637



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++      ++DG   +  +MK  G   +  V+ ++I+   +  + +QA  +  ++    
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N ++  L    R      ++  M+R+G  PN  TYN LL  L +      A+
Sbjct: 428 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 487

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            +++EM N G     V+Y T+++ +C++   + A     R +          +NA+I+  
Sbjct: 488 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 547

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE K+  A  LL +M       NV+ Y+ +IS LC+ G +  ++  L +M   G  PN 
Sbjct: 548 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 607

Query: 236 HSFTSLLKG 244
            ++  L++ 
Sbjct: 608 ATWNVLVRA 616



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 11/233 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +K   D  + L+ +M ++    +   F ++I      G   +AL +F+ +R  G
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + YN +L  L  E        +   M  +G E ++ TYN ++  LC+      A 
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 522

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            LL  M  +G  PDA ++  I+ + CK G+V  A  L     A+     V  Y  LI+ L
Sbjct: 523 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 582

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           C + K+  A   L +M+  GI PN  T++ ++ +      + T++G +G + +
Sbjct: 583 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA------IFTNIGTIGPIHL 629


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 269/581 (46%), Positives = 398/581 (68%), Gaps = 3/581 (0%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR-EFG 60
           + +L    ++DGVQY LQ+M++ GV+C EG  ++ I ++ R G A++ALK FYR R + G
Sbjct: 62  VRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLG 121

Query: 61  -LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
              PTV++YNH+LDALL EN  + + P+Y NM++ G+EPNV+TYN+L+KALC+N+RV  A
Sbjct: 122 CAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAA 181

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
            ++L EM  KGC PD VS+TTI+S++CKL +++EAR +        + YNA+++ LC + 
Sbjct: 182 RRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQF 241

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++ E F ++ EMV RG+ P+ + Y++I+ + C    +  +  IL +M   GC PN+ +FT
Sbjct: 242 RMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFT 301

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+KG+   G+ H+A  +WN M+ EG+ P+ ++Y+ LI GLC  G +  A+ V   M ++
Sbjct: 302 VLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKS 361

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C P+V TYS LIDGF+KAG+L  A  IWN M + GC PNVV YT MV VLC+  MF QA
Sbjct: 362 DCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQA 421

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            +LI+KM+ ENCPPNT+TFNT I+ LC  GR   A+ +   M++Y C PN  TYNELL G
Sbjct: 422 ENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHG 481

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L R    ++A  ++TE+   G +L++V+YNT + G+C+  M+ EA  LLG+M+I+G + D
Sbjct: 482 LFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPD 541

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           A TFN II+AYCK+G V  A  +L R+        +I++YTSL+ G+C+   + +A +YL
Sbjct: 542 AFTFNAIIHAYCKEGNVRAAAWMLGRM-DAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYL 600

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            KML EGICPN ATWNVLVR +F++LG +GP++++D I+ +
Sbjct: 601 LKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHIIED 641



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 11/233 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L +K   D  + L+ +M +E    +   F ++I S   +G A +AL +F+ +R +G
Sbjct: 408 MVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYG 467

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + YN +L  L  E        + + M   G E ++ +YN  +  LC+   +  A 
Sbjct: 468 CPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAM 527

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            LL  M  +G  PDA ++  I+ + CK G V  A     R  A+     +  Y +L++GL
Sbjct: 528 ILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGL 587

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           C +HK+++A   L +M+  GI PN  T++ ++        + T LG +G M +
Sbjct: 588 CSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRG------IFTHLGTIGPMHL 634



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 115/249 (46%), Gaps = 5/249 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +  ++D    +   M   G   +  V+ ++++   +  + +QA  +  ++    
Sbjct: 373 LIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLEN 432

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N ++ +L    R      ++  M+R G  PN  TYN LL  L +    + A 
Sbjct: 433 CPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDAL 492

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           ++L EM N G     VSY T +S +C++  ++EA     R +          +NA+I+  
Sbjct: 493 RMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAY 552

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE  +  A W+L  M       N++ Y++++S LC    ++ ++  L +M   G  PN 
Sbjct: 553 CKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNE 612

Query: 236 HSFTSLLKG 244
            ++  L++G
Sbjct: 613 ATWNVLVRG 621


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 274/573 (47%), Positives = 393/573 (68%), Gaps = 6/573 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK-PTVKIY 68
           ++DGVQY LQ+M++ GV+C+E   ++ I ++ R G A++ALK FYR  + G + P V++Y
Sbjct: 13  DVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVY 72

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           NH+LDALL EN    + P+Y NM++ G++PNV+TYN+L++ALC+N+RVD A K+L EM  
Sbjct: 73  NHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSR 132

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           KGC PD VS+ TIVS +CKLG+VEEAR          + YNA+++ LC E ++ E F ++
Sbjct: 133 KGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVV 192

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EMV RG+ PNV+TY+TI+ + C    +  +  IL +M   GC PN+ +FT+L+KG+   
Sbjct: 193 NEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFED 252

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+ H+A  +W+ M+ EG+ P+ ++Y+ LI GLC  G +  A+     M+ N+  PN TTY
Sbjct: 253 GKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTY 312

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S L+DGF+ AG+L GA  IWN M S+GC PNVV YT M+ VLC+  MF QA SLI+KM  
Sbjct: 313 STLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLM 372

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +NCPPNTVTFNT I  LC CGRV  A+ +   M++  C PN  TYNELL GL R    K+
Sbjct: 373 DNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKD 432

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           AF +V E+   G +L++VTYNT+++ +C+  M   A  LLG+M+++G + DA TFN II+
Sbjct: 433 AFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIH 492

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           AYCK+GKV+ A  LL ++        ++++YT L+  +CN G +  A +YL KML EGIC
Sbjct: 493 AYCKEGKVSIAACLLGQM-NAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGIC 551

Query: 549 PNFATWNVLVRSLFSNLGHLGPV----YILDDI 577
           PN ATWNVLVR++F+N+G +GP+    YI++D+
Sbjct: 552 PNEATWNVLVRAIFTNIGTIGPIHLFKYIVEDL 584



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 5/249 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++      ++DG   +  +MK  G   +  V+ ++I+   +  + +QA  +  ++    
Sbjct: 315 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 374

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N ++  L    R      ++  M+R+G  PN  TYN LL  L +      A+
Sbjct: 375 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 434

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            +++EM N G     V+Y T+++ +C++   + A     R +          +NA+I+  
Sbjct: 435 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 494

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE K+  A  LL +M       NV+ Y+ +IS LC+ G +  ++  L +M   G  PN 
Sbjct: 495 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 554

Query: 236 HSFTSLLKG 244
            ++  L++ 
Sbjct: 555 ATWNVLVRA 563



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 11/231 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +K   D  + L+ +M ++    +   F ++I      G   +AL +F+ +R  G
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + YN +L  L  E        +   M  +G E ++ TYN ++  LC+      A 
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 469

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            LL  M  +G  PDA ++  I+ + CK G+V  A  L     A+     V  Y  LI+ L
Sbjct: 470 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 529

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           C + K+  A   L +M+  GI PN  T++ ++ +      + T++G +G +
Sbjct: 530 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRA------IFTNIGTIGPI 574


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 270/582 (46%), Positives = 390/582 (67%), Gaps = 4/582 (0%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFG 60
           + +L    ++DGVQ  LQ+M++ GV C+EG  ++ + ++ R G  ++ALK FYR + + G
Sbjct: 62  VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121

Query: 61  -LKPT-VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
             +PT  ++YNH++DALL EN    +  +Y NM++DG+ PNVFTYN+L++ALC+NNRV  
Sbjct: 122 CARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGA 181

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKE 178
           A K+L EM  KGC PD V+Y TIVS +CKL +++EA E+        + YNA++  LC+E
Sbjct: 182 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCRE 241

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +++E F ++ +MV RG+ PNVITY+TI+ + C  G +  +  IL +M + GC PN+ +F
Sbjct: 242 FRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTF 301

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T+L++G    GR H+A D+W  M+ EG+ P+ V+Y+ LI GLCS G +  A S+   ME+
Sbjct: 302 TALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ 361

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           + C PNV TYS LIDGF+KAG+L GA  IWN M  +GC PNVV YT MV V C+  MF+Q
Sbjct: 362 HGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQ 421

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A SLI+KM  ENCPPNTVTFNT I+ LC C RV  A+ +  +M+++ C+PN  TYNEL+ 
Sbjct: 422 AKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIH 481

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL R     +A  +VTE++  GI+L++VTYNT++ G+C+  M  EA   +GKM+++G + 
Sbjct: 482 GLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQP 541

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           +A TF+ II+AYCK+G+V  A  +L  +      + +I+ YT L+  +CN   + +A  Y
Sbjct: 542 NAFTFSAIIHAYCKEGEVRMAAWMLGAM-NVVNCHRNILVYTILMAELCNQDKLVDAMTY 600

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           L KML EGI PN  TWNVLVR +F NLG + P   +  I  N
Sbjct: 601 LLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 642



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 12/228 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIR 57
           M++   +K   +  + L+ +M +E    +   F ++I S    RRVG   +AL +F+ +R
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG---RALGVFHEMR 465

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             G  P  + YN ++  L  E        + + M+  G+E ++ TYN ++  LC+     
Sbjct: 466 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 525

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF---GSGVSVYNALI 172
            A   + +M  +G  P+A +++ I+ + CK G+V  A  +  AM        + VY  L+
Sbjct: 526 EAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM 585

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETS 219
             LC + K+ +A   L +M+  GI PN +T++ ++  +  ++G +E S
Sbjct: 586 AELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPS 633


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/584 (46%), Positives = 387/584 (66%), Gaps = 14/584 (2%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFG 60
           + +L    ++DGVQ  LQ+M++ GV C+EG  ++ + ++ R G  ++ALK FYR + + G
Sbjct: 68  VRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 127

Query: 61  -LKPTV-KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
             +PT  ++YNH++DALL EN    +  +  NM++DG++PNVFTYN+L++ALC+N+RV  
Sbjct: 128 CARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGA 187

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKE 178
           A K+L EM  KGC PD V+Y TIVS++C LG+V+EA E+        + YNA+I  LC+E
Sbjct: 188 ARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCRE 247

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +++E F ++ +MV RG+ PNVITY+TI+++ C  G +  +  IL +M + GC PN+ +F
Sbjct: 248 FRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATF 307

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T+L+ G    GR H+A D+W  M+ EG+ P+ V+Y+ LI GLCS G +  A SV   ME+
Sbjct: 308 TALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQ 367

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           + C PN  TYS LIDGF+KAG+L GA  IWN M  +GC PNVV YT MV V C+  MF+Q
Sbjct: 368 HGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQ 427

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A SLI+KM  ENCPPNTVTFNT I+ LC C RV  A+ +  +M+++ C PN  TYNELL 
Sbjct: 428 AESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLH 487

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL R     +A ++V E++  GI+L++VTYNT++ G+C+  M  EA   +G+M++ G + 
Sbjct: 488 GLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQP 547

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN-----PDIISYTSLLWGICNSGGMQ 533
           DA TF  II+AYCK+G+V  A  +L      G  N      +I+ YT L+  +CN   ++
Sbjct: 548 DAFTFTAIIHAYCKEGEVRMAAWIL------GAMNVVNCGRNILVYTILMAELCNQDKLE 601

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +A +YL KML EGI PN  TWNVLVR +F NLG   P   +  I
Sbjct: 602 DAMVYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCNNPSDFIQHI 645



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 9/309 (2%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           A+   +  L + G +D       +M     P       A +  FA+AG    A + + R 
Sbjct: 63  AHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRA 122

Query: 332 ISN-GCSPNVVA--YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + + GC+       Y  ++  L + NM      +   M  +   PN  T+N  ++ LC  
Sbjct: 123 VHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQN 182

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            RV  A K+LD+M    C P+  TY  ++  L  + RV EA E+++            +Y
Sbjct: 183 HRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVA-----ASY 237

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N ++  +CR   + E F ++G M+  G + + IT+  I+ A+CK G++  A  +L R+  
Sbjct: 238 NAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVI 297

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G   P++ ++T+L+ G+ N G + +A    + M+ EG  P+  ++NVL+R L S     
Sbjct: 298 TG-CTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLK 356

Query: 569 GPVYILDDI 577
           G   +L+D+
Sbjct: 357 GASSVLNDM 365


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/581 (43%), Positives = 362/581 (62%), Gaps = 29/581 (4%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFG 60
           + +L    ++DGVQ  LQ+M++ GV C+EG  ++ + ++ R G  ++ALK FYR + + G
Sbjct: 62  VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121

Query: 61  -LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +P      H   AL   +R +     +                    ALC+NNRV  A
Sbjct: 122 CARP------HRAAALQPPHRRAAAGRTW--------------------ALCQNNRVGAA 155

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
            K+L EM  KGC PD V+Y TIVS +CKL +++EA E+        + YNA++  LC+E 
Sbjct: 156 RKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREF 215

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           +++E F ++ +MV RG+ PNVITY+TI+ + C  G +  +  IL +M + GC PN+ +FT
Sbjct: 216 RMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFT 275

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L++G    GR H+A D+W  M+ EG+ P+ V+Y+ LI GLCS G +  A S+   ME++
Sbjct: 276 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 335

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C PNV TYS LIDGF+KAG+L GA  IWN M  +GC PNVV YT MV V C+  MF+QA
Sbjct: 336 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 395

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SLI+KM  ENCPPNTVTFNT I+ LC C RV  A+ +  +M+++ C+PN  TYNEL+ G
Sbjct: 396 KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHG 455

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L R     +A  +VTE++  GI+L++VTYNT++ G+C+  M  EA   +GKM+++G + +
Sbjct: 456 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 515

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           A TF+ II+AYCK+G+V  A  +L  +      + +I+ YT L+  +CN   + +A  YL
Sbjct: 516 AFTFSAIIHAYCKEGEVRMAAWMLGAM-NVVNCHRNILVYTILMAELCNQDKLVDAMTYL 574

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            KML EGI PN  TWNVLVR +F NLG + P   +  I  N
Sbjct: 575 LKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPSDFIQHITMN 615



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 12/228 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIR 57
           M++   +K   +  + L+ +M +E    +   F ++I S    RRVG   +AL +F+ +R
Sbjct: 382 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG---RALGVFHEMR 438

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             G  P  + YN ++  L  E        + + M+  G+E ++ TYN ++  LC+     
Sbjct: 439 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 498

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF---GSGVSVYNALI 172
            A   + +M  +G  P+A +++ I+ + CK G+V  A  +  AM        + VY  L+
Sbjct: 499 EAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM 558

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETS 219
             LC + K+ +A   L +M+  GI PN +T++ ++  +  ++G +E S
Sbjct: 559 AELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPS 606


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/504 (47%), Positives = 337/504 (66%), Gaps = 1/504 (0%)

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            EN    +  +Y NM++DG+ PNVFTYN+L++ALC+NNRV  A K+L EM  KGC PD V
Sbjct: 136 GENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDV 195

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +Y TIVS +CKL +++EA E+        + YNA++  LC+E +++E F ++ +MV RG+
Sbjct: 196 TYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGL 255

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNVITY+TI+ + C  G +  +  IL +M + GC PN+ +FT+L++G    GR H+A D
Sbjct: 256 QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALD 315

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +W  M+ EG+ P+ V+Y+ LI GLCS G +  A S+   ME++ C PNV TYS LIDGF+
Sbjct: 316 MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFS 375

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KAG+L GA  IWN M  +GC PNVV YT MV V C+  MF+QA SLI+KM  ENCPPNTV
Sbjct: 376 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTV 435

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           TFNT I+ LC C RV  A+ +  +M+++ C+PN  TYNEL+ GL R     +A  +VTE+
Sbjct: 436 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 495

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +  GI+L++VTYNT++ G+C+  M  EA   +GKM+++G + +A TF+ II+AYCK+G+V
Sbjct: 496 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 555

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A  +L  +      + +I+ YT L+  +CN   + +A  YL KML EGI PN  TWNV
Sbjct: 556 RMAAWMLGAM-NVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 614

Query: 557 LVRSLFSNLGHLGPVYILDDIMAN 580
           LVR +F NLG + P   +  I  N
Sbjct: 615 LVRGVFRNLGCIEPSDFIQHITMN 638



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 220/462 (47%), Gaps = 10/462 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +   +   + +L +M  +G    +  + ++++   ++   ++A ++        
Sbjct: 165 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA-----A 219

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN I+ AL  E R   +  + S+M   G++PNV TY  ++ A CK   +  A 
Sbjct: 220 MPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 279

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            +L  M   GC P+ V++T +V  +   G+V +A ++     A  +      YN LI GL
Sbjct: 280 AILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGL 339

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    ++ A  +L  M   G  PNV TYST+I      G++  ++ I   M   GC PN+
Sbjct: 340 CSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNV 399

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+++  +      ++A  L ++M+ E   PN V ++TLI  LC    +  A+ V ++
Sbjct: 400 VVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHE 459

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  + C PN  TY+ LI G  + GN   A  +   M S+G   ++V Y  +V  LCQ  M
Sbjct: 460 MRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRM 519

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A   + KM  +   PN  TF+  I   C  G V  A  +L  M    C  NI  Y  
Sbjct: 520 SREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTI 579

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+  L   +++ +A   + ++   GI  N VT+N ++ GV R
Sbjct: 580 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFR 621



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 194/386 (50%), Gaps = 6/386 (1%)

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C E+ +     +   M   G+ PNV TY+ ++ +LC    V  +  +L +M  +GC P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +++       R  EA+++   M      P   +Y+ ++  LC    M E  SV   
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSD 249

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PNV TY+ ++D F KAG L  A  I  RM+  GC+PNVV +T +V+ L  +  
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H A  +   M  E   P+TV++N  I+GLC  G +  A  +L+ M+Q+ C PN+ TY+ 
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+DG  +   +  A  +  ++ + G + N+V Y  ++   C+  M  +A  L+ KML+E 
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 429

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + +TFN +I + C   +V  A+ +   +R  G   P+  +Y  L+ G+   G   +A
Sbjct: 430 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG-CVPNGRTYNELIHGLFREGNCGDA 488

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
              + +M + GI  +  T+N +V  L
Sbjct: 489 LHMVTEMQSHGIELSLVTYNTVVSGL 514



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 5/288 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    ++ G   +L  M+  G   +   + ++I+ + + G    A+ ++  +   G
Sbjct: 335 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 394

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V +Y +++D    +  F+    +   M  +   PN  T+N L+++LC   RV  A 
Sbjct: 395 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRAL 454

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +  EM   GC P+  +Y  ++  + + G   +A  +     S      +  YN +++GL
Sbjct: 455 GVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGL 514

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+     EA   + +M+ +GI PN  T+S II + C  G V  +  +LG M V  C+ NI
Sbjct: 515 CQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNI 574

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             +T L+       +  +A     +M+ EG  PN V ++ L+ G+  N
Sbjct: 575 LVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 622



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 32/312 (10%)

Query: 281 CSNGSMDEAVSVSYQ-MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           C   +M  AV + Y  M ++   PNV TY+ L+    +   +  A ++ + M   GC P+
Sbjct: 134 CCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPD 193

Query: 340 VVAYTCMVKVLCQNNMFHQA------------------------------HSLIEKMAFE 369
            V Y  +V VLC+ +   +A                               S++  M   
Sbjct: 194 DVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGR 253

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN +T+ T +   C  G +  A  +L +M    C PN+ T+  L+ GL    RV +A
Sbjct: 254 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++   +   G   + V+YN ++ G+C  G +  A  +L  M   G   +  T++ +I  
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           + K G +  AI + + +   G   P+++ YT+++   C      +A   + KML E   P
Sbjct: 374 FSKAGDLGGAISIWNDMSRSG-CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPP 432

Query: 550 NFATWNVLVRSL 561
           N  T+N L+RSL
Sbjct: 433 NTVTFNTLIRSL 444



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 32/249 (12%)

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C  NM      + + M  +   PN  T+N  ++ LC   RV  A K+LD+M +  C P+ 
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 411 TTYNELLDGLLRVNRVKEA------------------------------FELVTEIEKCG 440
            TY  ++  L +++R+ EA                              F +V+++   G
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +Q N++TY TI+   C+AG +  A  +L +M+I G   + +TF  ++      G+V++A+
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +   +   G W P  +SY  L+ G+C+ G ++ A   L  M   G  PN  T++ L+  
Sbjct: 315 DMWRWMVAEG-WAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373

Query: 561 LFSNLGHLG 569
            FS  G LG
Sbjct: 374 -FSKAGDLG 381



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 6/193 (3%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           PP+  +  T     CG   V   + + D M++    PN+ TYN L+  L + NRV  A +
Sbjct: 121 PPSRGSTTTSSTRCCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARK 180

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++ E+ + G   + VTY TI+  +C+   + EA ++L  M        A ++N I+ A C
Sbjct: 181 MLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLALC 235

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           ++ ++     ++  + G G   P++I+YT+++   C +G ++ A   L +M+  G  PN 
Sbjct: 236 REFRMQEVFSVVSDMVGRG-LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNV 294

Query: 552 ATWNVLVRSLFSN 564
            T+  LVR LF +
Sbjct: 295 VTFTALVRGLFDD 307



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 12/228 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIR 57
           M++   +K   +  + L+ +M +E    +   F ++I S    RRVG   +AL +F+ +R
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG---RALGVFHEMR 461

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             G  P  + YN ++  L  E        + + M+  G+E ++ TYN ++  LC+     
Sbjct: 462 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 521

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF---GSGVSVYNALI 172
            A   + +M  +G  P+A +++ I+ + CK G+V  A  +  AM        + VY  L+
Sbjct: 522 EAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILM 581

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETS 219
             LC + K+ +A   L +M+  GI PN +T++ ++  +  ++G +E S
Sbjct: 582 AELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEPS 629


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  344 bits (883), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 197/566 (34%), Positives = 309/566 (54%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           +I+KLG   E   +  LL QMK EG+   E +FI ++  Y R GL  QA ++   +R  +
Sbjct: 117 LIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVY 176

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PT + YN +LD LLA N   ++  ++  M   G+ P V+T+ +++KALC  N VD A
Sbjct: 177 SCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSA 236

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALING 174
             LL +M   GC P+A+ Y T++ ++ K+G+V E  +L            V+ +N  I+G
Sbjct: 237 CALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHG 296

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +I EA  L+  M+ RG  PN  TY  ++  LC +G V+ +  +L ++     NPN
Sbjct: 297 LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPN 352

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNR-MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  F +L+ GY+  GR  EA  + +  M+  G  P++  Y+TLI GLC  G +  A  + 
Sbjct: 353 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 412

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+   C PNV TY+ LID F K G L  A  + + M   G + N V Y C++  LC++
Sbjct: 413 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 472

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A ++   M+ + C P+  TFN+ I GLC   + + A+ L   M     + N  TY
Sbjct: 473 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 532

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+   LR   ++EA +LV ++   G  L+ +TYN ++  +CRAG + +   L   M+ 
Sbjct: 533 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 592

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           +G   + I+ NI+I   C+ G + +A++ L D I  G    PDI++Y SL+ G+C +G  
Sbjct: 593 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG--LTPDIVTYNSLINGLCKTGRA 650

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           QEA     K+  EGICP+  T+N L+
Sbjct: 651 QEALNLFDKLQVEGICPDAITYNTLI 676



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 243/491 (49%), Gaps = 10/491 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL+ M   G   +  V+ ++I++  +VG   + LK+   +   G  P V  +N
Sbjct: 232 EVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFN 291

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +  L    R      +   M   G  PN FTY +L+  LC+  +VD A  LL    NK
Sbjct: 292 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL----NK 347

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE------LAMRFGSGVSVYNALINGLCKEHKIEE 183
              P+ V + T+++     G+++EA+       L++  G  +  YN LI GLCK+  +  
Sbjct: 348 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 407

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ EM  +G +PNVITY+ +I   C  G +E +  +L +M  +G   N   +  L+ 
Sbjct: 408 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 467

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                 +  +A +++  M  +G  P++  +++LI GLC     +EA+ +   M       
Sbjct: 468 ALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIA 527

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  TY+ LI  F + G +  A ++ N M+  GC  + + Y  ++K LC+     +  +L 
Sbjct: 528 NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 587

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E M  +   PN ++ N  I GLC  G +  A++ L  M      P+I TYN L++GL + 
Sbjct: 588 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 647

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R +EA  L  +++  GI  + +TYNT++   C+ GM  +A  LL + +  G   + +T+
Sbjct: 648 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 707

Query: 484 NIIIYAYCKQG 494
            I++  + K+G
Sbjct: 708 YILVSNFIKEG 718



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 196/436 (44%), Gaps = 46/436 (10%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV----ETSLG 221
            VY  LI+ L    + +    LL +M   GI   V   S  I  +   G      + +  
Sbjct: 112 DVYYMLIDKLGAAGEFKTIDALLMQMKQEGI---VFRESLFILIMKHYGRAGLPGQATRL 168

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L    V  C P   S+  +L   L G       +++  M+ +G  P V  +  ++  LC
Sbjct: 169 LLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 228

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +D A ++   M  + C PN   Y  LI    K G +    ++   M+  GC P+V 
Sbjct: 229 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVN 288

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +   +  LC+    H+A  L+++M      PN+ T+   + GLC  G+VD A  LL+++
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV 348

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTILHGVCRAGM 460
                 PN+  +N L++G +   R+ EA  ++ E +   G   +I TYNT++ G+C+ G 
Sbjct: 349 PN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG---------- 510
           +V A +L+ +M I+G + + IT+ I+I  +CK+G++  A  +LD + G G          
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464

Query: 511 ------------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
                                      PDI ++ SL++G+C     +EA    Q ML EG
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEG 524

Query: 547 ICPNFATWNVLVRSLF 562
           +  N  T+N L+ +  
Sbjct: 525 VIANTITYNTLIHAFL 540



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 171/325 (52%), Gaps = 5/325 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   + L+ +M+++G   +   +  +I+ + + G  E+A  +   +   G
Sbjct: 395 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 454

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      YN ++ AL  + +      ++ +M   G +P++FT+N L+  LCK N+ + A 
Sbjct: 455 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 514

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRF-GSGVS--VYNALINGL 175
            L  +M  +G   + ++Y T++ +  + G ++EA +L   M F G  +    YN LI  L
Sbjct: 515 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 574

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   IE+   L  +M+ +G++PN I+ + +I+ LC  GN++ +L  L  M  RG  P+I
Sbjct: 575 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 634

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G    GR  EA +L++++  EG  P+ + Y+TLI   C  G  D+A  +  +
Sbjct: 635 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 694

Query: 296 MEENSCPPNVTTYSALIDGFAKAGN 320
             ++   PN  T+  L+  F K G+
Sbjct: 695 GVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 151/293 (51%), Gaps = 7/293 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++  ++  ++  + +L +M  +G++ +   +  +I++  +    + AL MF  +   G
Sbjct: 430 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 489

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP +  +N ++  L   N+F     +Y +M  +G+  N  TYN L+ A  +   +  A 
Sbjct: 490 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 549

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALING 174
           KL+ +M  +GC  D ++Y  ++ ++C+ G +E+   L     S       +S  N LING
Sbjct: 550 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC-NILING 608

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+   I+ A   L +M+ RG+ P+++TY+++I+ LC  G  + +L +  ++ V G  P+
Sbjct: 609 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 668

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             ++ +L+  +   G   +A  L +R +  GF+PN V +  L+      G  +
Sbjct: 669 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 7/301 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G+      Y  LI  L + G      ++  QM++       + +  ++  + +AG   
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 163

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
            A+++   M     C P   +Y  ++ VL   N      ++  +M  +   P   TF   
Sbjct: 164 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVV 223

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K LC    VD A  LL  M ++ C+PN   Y  L+  L +V RV E  +L+ E+   G 
Sbjct: 224 MKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGC 283

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ T+N  +HG+C+   + EA +L+ +ML+ G   ++ T+ ++++  C+ GKV+ A  
Sbjct: 284 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 343

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA-FIYLQKMLNEGICPNFATWNVLVRS 560
           LL+++      NP+++ + +L+ G  + G + EA  +  + ML+ G  P+  T+N L+  
Sbjct: 344 LLNKVP-----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 398

Query: 561 L 561
           L
Sbjct: 399 L 399


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  344 bits (882), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 201/566 (35%), Positives = 315/566 (55%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           +I+KLG   E   +  LL Q+K EG++  E +FI ++  Y R  L  QA +M   ++  +
Sbjct: 108 LIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVY 167

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PT K YN +LD L++ N  S+   ++  M   G+ P V+T+ +++KALC  N VD A
Sbjct: 168 CCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNA 227

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P++V Y T++ ++ K  +V EA +L      M     V  +N +I G
Sbjct: 228 CSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYG 287

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+ ++I E   L+  M+ RG  PN ITY  +++ LC VG V+ +  +L ++      PN
Sbjct: 288 LCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV----PTPN 343

Query: 235 IHSFTSLLKGYLLGGRTHEASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              FT L+ GY+  GR  EA+  L+++MI+ G  P+V  ++TLIHGLC  G M  AV + 
Sbjct: 344 DVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMV 403

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M  N C PN+ TY+ L+DGF K   L  A  + N M + G   N++ Y  +++ LC+N
Sbjct: 404 NDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKN 463

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  ++ +M+ + C P+  TFNT I GLC   R + A+ L   M     + N  TY
Sbjct: 464 GKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTY 523

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+   LR   ++EA +LV ++   G  L+ +TYN ++   C+ G   +A  L  +M+ 
Sbjct: 524 NTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVR 583

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           +      I+ N++I   C+ GKV NA++LL D I  G    PD+++Y SL+ G+C  G +
Sbjct: 584 KDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG--LAPDVVTYNSLINGLCKMGNI 641

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           +EAF    K+  EGI P+  T+N L+
Sbjct: 642 REAFNLFNKLQAEGIQPDAITYNTLI 667



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 202/435 (46%), Gaps = 44/435 (10%)

Query: 166 SVYNALIN--GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV----ETS 219
            VY+ LI+  G  KE K+ +   LL ++ + GI       S  I  +   G      + +
Sbjct: 103 DVYHVLIDKLGAAKEFKVIDK--LLLQIKEEGI---AFRESLFICIMKYYGRANLPGQAT 157

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +L    V  C P   S+  +L   +       A++++  M+ +G +P V  +  ++  
Sbjct: 158 RMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKA 217

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC    +D A S+   M ++ C PN   Y  LI   +K   +  A ++   M   GC P+
Sbjct: 218 LCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPD 277

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL- 398
           V  +  ++  LC+ N  H+   L+++M F    PN +T+   + GLC  G+VD A  LL 
Sbjct: 278 VDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN 337

Query: 399 -------------------------------DQMKQYECLPNITTYNELLDGLLRVNRVK 427
                                          D+M +  C P++ T+N L+ GL +   + 
Sbjct: 338 KVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMG 397

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A ++V ++   G   N++TY T+L G C+   + EA  +L +M  +G +L+ + +N+++
Sbjct: 398 SAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLL 457

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            A CK GKV  A+ +L  +   G   PDI ++ +L++G+C     ++A    + ML +G+
Sbjct: 458 RALCKNGKVPKALDMLGEMSDKG-CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516

Query: 548 CPNFATWNVLVRSLF 562
             N  T+N L+ +  
Sbjct: 517 IANTVTYNTLIHAFL 531



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 170/337 (50%), Gaps = 5/337 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M   G       F ++I+   + GL   A+ M   +   G  P +  Y  +LD  
Sbjct: 366 FLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGF 425

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             +N+      + + M   G E N+  YN+LL+ALCKN +V  A  +L EM +KGC PD 
Sbjct: 426 CKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDI 485

Query: 136 VSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            ++ T++  +CK+ + E+A    R++ +    +    YN LI+   +   I+EA  L+ +
Sbjct: 486 FTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVND 545

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+ RG   + ITY+ +I + C +G  E +LG+  +M  +   P+  S   L+ G    G+
Sbjct: 546 MLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGK 605

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A +L   MI  G  P+VV Y++LI+GLC  G++ EA ++  +++     P+  TY+ 
Sbjct: 606 VCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNT 665

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           LI    +AG    A  +  R + N   PN V +  +V
Sbjct: 666 LICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILV 702



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 147/283 (51%), Gaps = 7/283 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++   +K +++   Y+L +M  +G   +   +  ++ +  + G   +AL M   + + G
Sbjct: 421 LLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKG 480

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP +  +N ++  L   +R      +Y +M  DG+  N  TYN L+ A  +   +  A 
Sbjct: 481 CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEAL 540

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR--FGSGVSVYNALING 174
           KL+ +M  +GC  D ++Y  ++ + CKLG  E+A     E+  +    S +S  N LING
Sbjct: 541 KLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISC-NLLING 599

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+  K+  A  LL +M+ RG+ P+V+TY+++I+ LC +GN+  +  +  ++   G  P+
Sbjct: 600 LCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPD 659

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
             ++ +L+  +   G   +A  L  R +   F+PN V +  L+
Sbjct: 660 AITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILV 702


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 197/566 (34%), Positives = 308/566 (54%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           +I+KLG   E      LL QMK EG+   E +FI ++  Y R GL  QA ++   +R  +
Sbjct: 135 LIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVY 194

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PT + YN +LD LLA N   ++  ++  M   G+ P V+T+ +++KALC  N VD A
Sbjct: 195 SCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSA 254

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALING 174
             LL +M   GC P+A+ Y T++ ++ K+G+V E  +L            V+ +N  I+G
Sbjct: 255 CALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHG 314

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +I EA  L+  M+ RG  PN  TY  ++  LC +G V+ +  +L ++     NPN
Sbjct: 315 LCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKV----PNPN 370

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNR-MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  F +L+ GY+  GR  EA  + +  M+  G  P++  Y+TLI GLC  G +  A  + 
Sbjct: 371 VVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM 430

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+   C PNV TY+ LID F K G L  A  + + M   G + N V Y C++  LC++
Sbjct: 431 NEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKD 490

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A ++   M+ + C P+  TFN+ I GLC   + + A+ L   M     + N  TY
Sbjct: 491 EKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITY 550

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+   LR   ++EA +LV ++   G  L+ +TYN ++  +CRAG + +   L   M+ 
Sbjct: 551 NTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMS 610

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           +G   + I+ NI+I   C+ G + +A++ L D I  G    PDI++Y SL+ G+C +G  
Sbjct: 611 KGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG--LTPDIVTYNSLINGLCKTGRA 668

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           QEA     K+  EGICP+  T+N L+
Sbjct: 669 QEALNLFDKLQVEGICPDAITYNTLI 694



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 243/491 (49%), Gaps = 10/491 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL+ M   G   +  V+ ++I++  +VG   + LK+   +   G  P V  +N
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +  L    R      +   M   G  PN FTY +L+  LC+  +VD A  LL    NK
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL----NK 365

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE------LAMRFGSGVSVYNALINGLCKEHKIEE 183
              P+ V + T+++     G+++EA+       L++  G  +  YN LI GLCK+  +  
Sbjct: 366 VPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ EM  +G +PNVITY+ +I   C  G +E +  +L +M  +G   N   +  L+ 
Sbjct: 426 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                 +  +A +++  M  +G  P++  +++LI GLC     +EA+ +   M       
Sbjct: 486 ALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIA 545

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  TY+ LI  F + G +  A ++ N M+  GC  + + Y  ++K LC+     +  +L 
Sbjct: 546 NTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALF 605

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E M  +   PN ++ N  I GLC  G +  A++ L  M      P+I TYN L++GL + 
Sbjct: 606 EDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKT 665

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R +EA  L  +++  GI  + +TYNT++   C+ GM  +A  LL + +  G   + +T+
Sbjct: 666 GRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 725

Query: 484 NIIIYAYCKQG 494
            I++  + K+G
Sbjct: 726 YILVSNFIKEG 736



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 203/449 (45%), Gaps = 40/449 (8%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
            VY  LI+ L    + +    LL +M   GI      +  I+      G    +  +L  
Sbjct: 130 DVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 189

Query: 226 MF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           M  V  C P   S+  +L   L G       +++  M+ +G  P V  +  ++  LC   
Sbjct: 190 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A ++   M  + C PN   Y  LI   +K G +    ++   M+  GC P+V  + 
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
             +  LC+    H+A  L+++M      PN+ T+   + GLC  G+VD A  LL+++   
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN- 368

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              PN+  +N L++G +   R+ EA  ++ E +   G   +I TYNT++ G+C+ G +V 
Sbjct: 369 ---PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVS 425

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------------- 510
           A +L+ +M I+G + + IT+ I+I  +CK+G++  A  +LD + G G             
Sbjct: 426 ARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLIS 485

Query: 511 ---------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
                                   PDI ++ SL++G+C     +EA    Q ML EG+  
Sbjct: 486 ALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIA 545

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           N  T+N L+ +          + +++D++
Sbjct: 546 NTITYNTLIHAFLRRGAMQEALKLVNDML 574



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 171/325 (52%), Gaps = 5/325 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   + L+ +M+++G   +   +  +I+ + + G  E+A  +   +   G
Sbjct: 413 LILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKG 472

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      YN ++ AL  + +      ++ +M   G +P++FT+N L+  LCK N+ + A 
Sbjct: 473 LALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEAL 532

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRF-GSGVS--VYNALINGL 175
            L  +M  +G   + ++Y T++ +  + G ++EA +L   M F G  +    YN LI  L
Sbjct: 533 GLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKAL 592

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   IE+   L  +M+ +G++PN I+ + +I+ LC  GN++ +L  L  M  RG  P+I
Sbjct: 593 CRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 652

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G    GR  EA +L++++  EG  P+ + Y+TLI   C  G  D+A  +  +
Sbjct: 653 VTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSR 712

Query: 296 MEENSCPPNVTTYSALIDGFAKAGN 320
             ++   PN  T+  L+  F K G+
Sbjct: 713 GVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 151/293 (51%), Gaps = 7/293 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++  ++  ++  + +L +M  +G++ +   +  +I++  +    + AL MF  +   G
Sbjct: 448 LIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 507

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP +  +N ++  L   N+F     +Y +M  +G+  N  TYN L+ A  +   +  A 
Sbjct: 508 CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEAL 567

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALING 174
           KL+ +M  +GC  D ++Y  ++ ++C+ G +E+   L     S       +S  N LING
Sbjct: 568 KLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC-NILING 626

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+   I+ A   L +M+ RG+ P+++TY+++I+ LC  G  + +L +  ++ V G  P+
Sbjct: 627 LCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPD 686

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             ++ +L+  +   G   +A  L +R +  GF+PN V +  L+      G  +
Sbjct: 687 AITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 148/301 (49%), Gaps = 7/301 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G+      Y  LI  L + G      ++  QM++       + +  ++  + +AG   
Sbjct: 122 QKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 181

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
            A+++   M     C P   +Y  ++ VL   N      ++  +M  +   P   TF   
Sbjct: 182 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVV 241

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K LC    VD A  LL  M ++ C+PN   Y  L+  L +V RV E  +L+ E+   G 
Sbjct: 242 MKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGC 301

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ T+N  +HG+C+   + EA +L+ +ML+ G   ++ T+ ++++  C+ GKV+ A  
Sbjct: 302 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 361

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA-FIYLQKMLNEGICPNFATWNVLVRS 560
           LL+++      NP+++ + +L+ G  + G + EA  +  + ML+ G  P+  T+N L+  
Sbjct: 362 LLNKVP-----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416

Query: 561 L 561
           L
Sbjct: 417 L 417


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 187/566 (33%), Positives = 319/566 (56%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           +I+KLG       +  LL QMK EG+   E +FI ++  Y R GL  QA ++   ++  +
Sbjct: 110 LIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVY 169

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +P+ + YN +LD L+  N  S+ + ++ +M   G+ PN +T+ +++KALC  N VD A
Sbjct: 170 CCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNA 229

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P+++ Y T++ ++ K  +V+EA +L      M     V+ +N +I G
Sbjct: 230 CLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYG 289

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+ +++ E   L+  M+ +G  PN +TY  ++  LC    ++ +  +L ++      PN
Sbjct: 290 FCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV----PGPN 345

Query: 235 IHSFTSLLKGYLLGGRTHEASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  F +L+ G++  GR +EA+  ++++MI  G++P+V  +STL++GLC  G    A+ + 
Sbjct: 346 VVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELV 405

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M+   C PN+ TY+ LIDGF K G L  A  I   M++ G S N V Y  ++  LC++
Sbjct: 406 NDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKH 465

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H+A  +  +M+ + C P+  TFN+ I GLC    ++ A+ L   M     + N  T+
Sbjct: 466 GKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTF 525

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+   LR   ++EA +LV ++   G  L+ +TYN ++  +C+ G V +   L  +M+ 
Sbjct: 526 NTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIR 585

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           +G     IT NI+I  +C  GKV+NA++ + D I  G  ++PDI++Y SL+ G+C  G +
Sbjct: 586 KGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG--FSPDIVTYNSLINGLCKRGRI 643

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           QEA    +K+  EGI P+  T+N L+
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLI 669



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 245/490 (50%), Gaps = 10/490 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL+ M   G   +  ++ ++I++  +    ++ALK+   +   G  P V  +N
Sbjct: 225 EVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFN 284

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++      NR      +   M   G  PN  TY  L+  LCK  R+D A  LL    +K
Sbjct: 285 TVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL----SK 340

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEE 183
              P+ V + T+V+   + G++ EA            +   V  ++ L+NGLCK+     
Sbjct: 341 VPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGS 400

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ +M  +G  PN+ TY+ +I   C  G +E +  IL +M  +G + N   + +L+ 
Sbjct: 401 ALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALIS 460

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                G+ HEA D++  M  +G  P++  +++LI GLC    M++A+++   M       
Sbjct: 461 ALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIA 520

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  T++ LI  F + G +  A ++ N M+  GC  + + Y  ++K LC+     +   L 
Sbjct: 521 NSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLF 580

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E+M  +   P+ +T N  I G C  G+V  A++ +  M      P+I TYN L++GL + 
Sbjct: 581 EEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKR 640

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R++EA  L  +++  GIQ + +TYNT++  +CR G   +A  LL + +  G   + +T+
Sbjct: 641 GRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTW 700

Query: 484 NIIIYAYCKQ 493
           NI++Y + KQ
Sbjct: 701 NILVYNFGKQ 710



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 197/367 (53%), Gaps = 8/367 (2%)

Query: 197 DPNVITYSTIISSLCDVGNVET-SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           +P+  +Y+ ++  L  VGN  + +  +   M  +G +PN ++F  ++K   +      A 
Sbjct: 172 EPSFRSYNVVLDVLV-VGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNAC 230

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L   M + G +PN + Y TLI  L     +DEA+ +  +M    CPP+V T++ +I GF
Sbjct: 231 LLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGF 290

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            +   +L  +++ +RMI  G +PN + Y  ++  LC+     +A +L+ K+      PN 
Sbjct: 291 CRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNV 346

Query: 376 VTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           V FNT + G    GR++ A   + D+M     +P++ T++ L++GL +      A ELV 
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           +++  G + N+ TY  ++ G C+ G + EA  +L +ML +G  L+ + +N +I A CK G
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K++ A+ +   +   G   PDI ++ SL++G+C    M++A    + M+ EG+  N  T+
Sbjct: 467 KIHEALDMFGEMSSKG-CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTF 525

Query: 555 NVLVRSL 561
           N L+ + 
Sbjct: 526 NTLIHAF 532



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 156/334 (46%), Gaps = 40/334 (11%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F +++N   + GL   AL++   +   G KP +  Y  ++D    + +      I   M
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G   N   YN L+ ALCK+ ++  A  +  EM +KGC PD  ++ +++  +C++ ++
Sbjct: 444 LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM 503

Query: 152 EEA----RELAMRFGSGVSV------------------------------------YNAL 171
           E+A    R++ +      SV                                    YN L
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGL 563

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I  LCK   +E+   L  EM+ +G+ P++IT + +I+  C  G V  +L  +  M  RG 
Sbjct: 564 IKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGF 623

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +P+I ++ SL+ G    GR  EA +L+ ++  EG  P+ + Y+TLI  LC  G+ D+A  
Sbjct: 624 SPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACF 683

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           + Y+  EN   PN  T++ L+  F K  N  G +
Sbjct: 684 LLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQT 717



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 96/221 (43%), Gaps = 43/221 (19%)

Query: 397 LLDQMKQYECLPNITTYNELLD-----------------------------------GLL 421
           LLD    Y C P+  +YN +LD                                    L 
Sbjct: 162 LLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALC 221

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
            VN V  A  L+ ++ K G   N + Y T++  + +   V EA +LL +M + G   D  
Sbjct: 222 MVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVN 281

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           TFN +IY +C+  +V    +L+DR+   G + P+ ++Y  L+ G+C +  + EA    Q 
Sbjct: 282 TFNTVIYGFCRLNRVLEGAKLVDRMILKG-FTPNDMTYGYLMHGLCKTCRIDEA----QA 336

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHL--GPVYILDDIMAN 580
           +L++   PN   +N LV     N G L     ++ D ++ N
Sbjct: 337 LLSKVPGPNVVHFNTLVNGFVRN-GRLNEATAFVYDKMINN 376


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 306/566 (54%), Gaps = 5/566 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +   +        +MK +G   +E  +  +IN + +V    +A  +   ++E G
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y+ ++     + +      ++  M  +G  PN+ TYN LL  LC+N  +D AY
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           +LL EM  +G  PD  SY T+++ +CK G+++ A ++     +G     V  Y+ LI GL
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++EA  L  +M +   +P+V+T++ ++  LC    ++ +  +L  M  R C PN+
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    G+  +A +++ RMI  G  PNVV Y++LIHG C    +D A+ +  +
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P++ TY+ LIDG  K G    A++++  M +  C+P+V+ Y+C++   C+   
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A +L + M  +   P+ VTF+T ++G C  G VD A +LL++M   +C P++ TY  
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+DG  +V R+ EA  ++  + K G Q N+VTY  ++   CRAG    A++LL +M+  G
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + + IT+  +I  +C  G +  A ++L+R+        D+ +Y  ++ G+C +G M  A
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAA 552

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
              L+ +   G  P    +  L+R L
Sbjct: 553 LELLEAIKQSGTPPRHDIYVALIRGL 578



 Score =  304 bits (778), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 163/490 (33%), Positives = 265/490 (54%), Gaps = 8/490 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           E NV T+ I++  LCK NR+  A     +M  KG  P+  +Y  +++  CK+ +V  A  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 157 LAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L            V  Y+ +I+G C++ K++ A+ L  +MV+ G  PN++TY+T++S LC
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G ++ +  +L +M  RG  P+  S+ +L+ G    G+   A  ++         P+VV
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           AYSTLI GLC  G +DEA  +  +M ENSC P+V T++AL+DG  K   L  A Q+   M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
               C+PNV+ Y+ ++  LC+      A  + ++M      PN VT+N+ I G C    V
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A+ L+++M    CLP+I TYN L+DGL +  R  EA  L  +++      +++TY+ +
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G C+   +  A  L   ML +    D +TF+ ++  YC  G V++A +LL+ +    +
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV-ASD 422

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
            +PD+ +YTSL+ G C  G M EA   L++M   G  PN  T+  L+ + F   G     
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA-FCRAGKPTVA 481

Query: 572 Y-ILDDIMAN 580
           Y +L++++ N
Sbjct: 482 YKLLEEMVGN 491



 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 166/572 (29%), Positives = 289/572 (50%), Gaps = 42/572 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++MK  G++ +   + +VI+ + R    + A K+F ++ E G  P +  YN +L  L 
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +   M+  G++P+ F+Y+ L+  LCK  ++D A K+  +  N  C PD V
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183

Query: 137 SYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+T+++ +CK G+++EA +L   MR  S    V  + AL++GLCK  +++EA  +L  M
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 243

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            DR   PNVITYS++I  LC  G V  +  +  +M VRG  PN+ ++ SL+ G+ +    
Sbjct: 244 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 303

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L   M   G LP+++ Y+TLI GLC  G   EA  +   M+   C P+V TYS L
Sbjct: 304 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF K   +  A  +++ M+     P+VV ++ +V+  C   +   A  L+E+M   +C
Sbjct: 364 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 423

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+ + + G C  GR+  A ++L +M +  C PN+ TY  L+D   R  +   A++
Sbjct: 424 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYK 483

Query: 432 LVTEIEKCGIQLNIVTYNTI------------------------------------LHGV 455
           L+ E+   G+Q N++TY ++                                    + G+
Sbjct: 484 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGL 543

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CR G +  A +LL  +   GT      +  +I   C+  ++  A+++L+ +    +  P+
Sbjct: 544 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 603

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKML-NEG 546
             +Y +++  +   G  +EA     ++L N+G
Sbjct: 604 AEAYEAVIQELAREGRHEEANALADELLGNKG 635



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 273/505 (54%), Gaps = 7/505 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL +M+  G+   +  + +++    + G  + ALK+F         P V  Y+ 
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L    R      ++  M+ +  EP+V T+  L+  LCK +R+  A ++L  M ++ 
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
           C P+ ++Y++++  +CK GQV +A+E+  R         V  YN+LI+G C  + ++ A 
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+ EM   G  P++ITY+T+I  LC  G    +  + G M  + CNP++ +++ L+ G+
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               R   A  L++ M+++  LP+VV +STL+ G C+ G +D+A  +  +M  + C P+V
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY++L+DGF K G ++ A ++  RM   GC PNVV YT ++   C+      A+ L+E+
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE 487

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLLRVN 424
           M      PN +T+ + I G CG G ++ A K+L+++++ E C  ++  Y  ++DGL R  
Sbjct: 488 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG 547

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM-LIEGTKLDAITF 483
           R+  A EL+  I++ G       Y  ++ G+C+   + +A ++L +M L   ++ +A  +
Sbjct: 548 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAY 607

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRG 508
             +I    ++G+   A  L D + G
Sbjct: 608 EAVIQELAREGRHEEANALADELLG 632



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 216/400 (54%), Gaps = 1/400 (0%)

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           M     V  +  +I+GLCK +++ EA     +M  +G  PN  TY+ +I+  C V  V  
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  +L +M   G  PN+ ++++++ G+    +   A  L+ +M+  G +PN+V Y+TL+ 
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC NG MDEA  +  +M E    P+  +Y  L+ G  K G +  A +++    +  C P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +VVAY+ ++  LC+     +A  L EKM   +C P+ VTF   + GLC   R+  A ++L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           + M+   C PN+ TY+ L+DGL +  +V++A E+   +   GI+ N+VTYN+++HG C  
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
             V  A  L+ +M   G   D IT+N +I   CK G+   A +L   ++     NPD+I+
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVIT 359

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           Y+ L+ G C    +  A      ML + + P+  T++ LV
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 306/566 (54%), Gaps = 5/566 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +   +        +MK +G   +E  +  +IN + +V    +A  +   ++E G
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y+ ++     + +      ++  M  +G  PN+ TYN LL  LC+N  +D AY
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           +LL EM  +G  PD  SY T+++ +CK G+++ A ++     +G     V  Y+ LI GL
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++EA  L  +M +   +P+V+T++ ++  LC    ++ +  +L  M  R C PN+
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 371

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    G+  +A +++ RMI  G  PNVV Y++LIHG C    +D A+ +  +
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P++ TY+ LIDG  K G    A++++  M +  C+P+V+ Y+C++   C+   
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A +L + M  +   P+ VTF+T ++G C  G VD A +LL++M   +C P++ TY  
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+DG  +V R+ EA  ++  + K G Q N+VTY  ++   CRAG    A++LL +M+  G
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + + IT+  +I  +C  G +  A ++L+R+        D+ +Y  ++ G+C +G M  A
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
              L+ +   G  P    +  L+R L
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGL 697



 Score =  332 bits (852), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 178/563 (31%), Positives = 305/563 (54%), Gaps = 9/563 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D    LL++M+  G      ++  VI++  +     +AL  F   R   
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF---RSME 121

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +  V  +  ++D L   NR       ++ MK+ G  PN +TYN+L+   CK ++V  AY
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL EM   G AP+ V+Y+T++   C+  +V+ A +L  +         +  YN L++GL
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   ++EA+ LL EM +RG+ P+  +Y T+++ LC  G ++ +L +        C P++
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++L+ G    GR  EA  L+ +M      P+VV ++ L+ GLC    + EA  V   
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME+ +C PNV TYS+LIDG  K G +  A +++ RMI  G  PNVV Y  ++   C  N 
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L+E+M    C P+ +T+NT I GLC  GR   A +L   MK   C P++ TY+ 
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  ++ R+  A  L  ++ K  +  ++VT++T++ G C AG+V +A +LL +M+   
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D  T+  ++  +CK G++  A ++L R+   G   P++++YT+L+   C +G    A
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG-CQPNVVTYTALIDAFCRAGKPTVA 600

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
           +  L++M+  G+ PN  T+  L+
Sbjct: 601 YRLLEEMVGNGVQPNVITYRSLI 623



 Score =  308 bits (789), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 167/515 (32%), Positives = 275/515 (53%), Gaps = 4/515 (0%)

Query: 47  EQALKMFY-RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           + AL+ F+   ++ G    V  YN + +ALL   R      I  N    G+ PNVFTY +
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS 163
           +++ LCK+  +D A +LL EM   G  PDA  Y  ++ ++CK     +A +   +M    
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            V  +  +I+GLCK +++ EA     +M  +G  PN  TY+ +I+  C V  V  +  +L
Sbjct: 125 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  PN+ ++++++ G+    +   A  L+ +M+  G +PN+V Y+TL+ GLC N
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 244

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G MDEA  +  +M E    P+  +Y  L+ G  K G +  A +++    +  C P+VVAY
Sbjct: 245 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 304

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           + ++  LC+     +A  L EKM   +C P+ VTF   + GLC   R+  A ++L+ M+ 
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
             C PN+ TY+ L+DGL +  +V++A E+   +   GI+ N+VTYN+++HG C    V  
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A  L+ +M   G   D IT+N +I   CK G+   A +L   ++     NPD+I+Y+ L+
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVITYSCLI 483

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            G C    +  A      ML + + P+  T++ LV
Sbjct: 484 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518



 Score =  292 bits (748), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 166/572 (29%), Positives = 288/572 (50%), Gaps = 42/572 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++MK  G++ +   + +VI+ + R    + A K+F ++ E G  P +  YN +L  L 
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 242

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +   M+  G++P+ F+Y+ L+  LCK  ++D A K+  +  N  C PD V
Sbjct: 243 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 302

Query: 137 SYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+T+++ +CK G+++EA +L   MR  S    V  + AL++GLCK  +++EA  +L  M
Sbjct: 303 AYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETM 362

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            DR   PNVITYS++I  LC  G V  +  +  +M VRG  PN+ ++ SL+ G+ +    
Sbjct: 363 EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGV 422

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L   M   G LP+++ Y+TLI GLC  G   EA  +   M+   C P+V TYS L
Sbjct: 423 DSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 482

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF K   +  A  +++ M+     P+VV ++ +V+  C   +   A  L+E+M   +C
Sbjct: 483 IGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDC 542

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+ + + G C  GR+  A ++L +M +  C PN+ TY  L+D   R  +   A+ 
Sbjct: 543 SPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYR 602

Query: 432 LVTEIEKCGIQLNIVTYNTI------------------------------------LHGV 455
           L+ E+   G+Q N++TY ++                                    + G+
Sbjct: 603 LLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGL 662

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CR G +  A +LL  +   GT      +  +I   C+  ++  A+++L+ +    +  P+
Sbjct: 663 CRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPN 722

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKML-NEG 546
             +Y +++  +   G  +EA     ++L N+G
Sbjct: 723 AEAYEAVIQELAREGRHEEANALADELLGNKG 754



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 273/505 (54%), Gaps = 7/505 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL +M+  G+   +  + +++    + G  + ALK+F         P V  Y+ 
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L    R      ++  M+ +  EP+V T+  L+  LCK +R+  A ++L  M ++ 
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
           C P+ ++Y++++  +CK GQV +A+E+  R         V  YN+LI+G C  + ++ A 
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+ EM   G  P++ITY+T+I  LC  G    +  + G M  + CNP++ +++ L+ G+
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               R   A  L++ M+++  LP+VV +STL+ G C+ G +D+A  +  +M  + C P+V
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY++L+DGF K G ++ A ++  RM   GC PNVV YT ++   C+      A+ L+E+
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE 606

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLLRVN 424
           M      PN +T+ + I G CG G ++ A K+L+++++ E C  ++  Y  ++DGL R  
Sbjct: 607 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTG 666

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM-LIEGTKLDAITF 483
           R+  A EL+  I++ G       Y  ++ G+C+   + +A ++L +M L   ++ +A  +
Sbjct: 667 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAY 726

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRG 508
             +I    ++G+   A  L D + G
Sbjct: 727 EAVIQELAREGRHEEANALADELLG 751



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 216/420 (51%), Gaps = 4/420 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F   V  YN L   L +  +I+E   +L      GI PNV TY+ +I  LC  G+++ + 
Sbjct: 20  FDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKAC 79

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L +M   G  P+   +  ++        T +A D +  M  E    NV+ ++ +I GL
Sbjct: 80  ELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE---KNVITWTIMIDGL 136

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    + EA +   +M++    PN  TY+ LI+GF K   +  A  +   M  +G +PNV
Sbjct: 137 CKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNV 196

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y+ ++   C+      A+ L  +M    C PN VT+NT + GLC  G +D A +LLD+
Sbjct: 197 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 256

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++    P+  +Y+ L+ GL +  ++  A ++  +        ++V Y+T++ G+C+AG 
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + EA +L  KM     + D +TF  ++   CK  ++  A Q+L+ +       P++I+Y+
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN-CTPNVITYS 375

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           SL+ G+C +G +++A    ++M+  GI PN  T+N L+       G    + +++++ A 
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  337 bits (863), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 187/567 (32%), Positives = 306/567 (53%), Gaps = 16/567 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           +I KLG   E   +  LL QMK EG+   E +FIS++  Y + G   Q  ++   +R  +
Sbjct: 117 LIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 176

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PT K YN +L+ L++ N   +   ++ +M    + P +FT+ +++KA C  N +D A
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P++V Y T++ S+ K  +V EA +L      M        +N +I G
Sbjct: 237 LSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 296

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +I EA  ++  M+ RG  P+ ITY  +++ LC +G V+ +      +F R   P 
Sbjct: 297 LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPE 352

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           I  F +L+ G++  GR  +A  + + M+   G +P+V  Y++LI+G    G +  A+ V 
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           + M    C PNV +Y+ L+DGF K G +  A  + N M ++G  PN V + C++   C+ 
Sbjct: 413 HDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           +   +A  +  +M  + C P+  TFN+ I GLC    +  A+ LL  M     + N  TY
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L++  LR   +KEA +LV E+   G  L+ +TYN+++ G+CRAG V +A  L  KML 
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 592

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR--IRGGGEWNPDIISYTSLLWGICNSGG 531
           +G     I+ NI+I   C+ G V  A++      +RG     PDI+++ SL+ G+C +G 
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS---TPDIVTFNSLINGLCRAGR 649

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLV 558
           +++     +K+  EGI P+  T+N L+
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLM 676



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 271/540 (50%), Gaps = 39/540 (7%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G + +  +Y  ++  L A   F  I+ +   MK +G+      +  +++   K       
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165

Query: 120 YKLLVEMGN-KGCAPDAVSYTTI----VSSIC-KLGQVEEARELAMRFGSGVSVYNALIN 173
            +L++EM N   C P   SY  +    VS  C K+        L+ +    +  +  ++ 
Sbjct: 166 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             C  ++I+ A  LL +M   G  PN + Y T+I SL     V  +L +L +MF+ GC P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN------------------------ 269
           +  +F  ++ G     R +EA+ + NRM+  GF P+                        
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345

Query: 270 -------VVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTYSALIDGFAKAGNL 321
                  +V ++TLIHG  ++G +D+A +V   M  +    P+V TY++LI G+ K G +
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++ + M + GC PNV +YT +V   C+     +A++++ +M+ +   PNTV FN  
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I   C   R+  A+++  +M +  C P++ T+N L+ GL  V+ +K A  L+ ++   G+
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N VTYNT+++   R G + EA +L+ +M+ +G+ LD IT+N +I   C+ G+V+ A  
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L +++   G   P  IS   L+ G+C SG ++EA  + ++M+  G  P+  T+N L+  L
Sbjct: 586 LFEKMLRDGH-APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 150/290 (51%), Gaps = 8/290 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ID    +L +M  +G+  +   F  +I+++ +     +A+++F  +   G KP
Sbjct: 436 KLGK---IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  +N ++  L   +       +  +M  +G+  N  TYN L+ A  +   +  A KL+
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKE 178
            EM  +G   D ++Y +++  +C+ G+V++AR L    +R G   S    N LINGLC+ 
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             +EEA     EMV RG  P+++T++++I+ LC  G +E  L +  ++   G  P+  +F
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            +L+     GG  ++A  L +  I +GF+PN   +S L+  +    ++D 
Sbjct: 673 NTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 7/298 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           + G+  +   Y  LI  L +NG       +  QM++       + + +++  + KAG   
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             +++   M +   C P   +Y  ++++L   N    A ++   M     PP   TF   
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K  C    +D A+ LL  M ++ C+PN   Y  L+  L + NRV EA +L+ E+   G 
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             +  T+N ++ G+C+   + EA +++ +MLI G   D IT+  ++   CK G+V+ A  
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE-GICPNFATWNVLV 558
           L  RI       P+I+ + +L+ G    G + +A   L  M+   GI P+  T+N L+
Sbjct: 344 LFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 73/155 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    E+D  + L ++M  +G + S      +IN   R G+ E+A++    +   G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +N +++ L    R      ++  ++ +G+ P+  T+N L+  LCK   V  A 
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            LL E    G  P+  +++ ++ SI     ++  R
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  335 bits (859), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 186/565 (32%), Positives = 305/565 (53%), Gaps = 12/565 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           +I KLG   E   +  LL QMK EG+   E +FIS++  Y + G   Q  ++   +R  +
Sbjct: 111 LIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVY 170

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PT K YN +L+ L++ N   +   ++ +M    + P +FT+ +++KALC  N VD A
Sbjct: 171 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSA 230

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             +L +M   GC P++V Y T++ S+ K  +V EA +L      M        +N +I G
Sbjct: 231 LSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILG 290

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +I EA  ++  M+ RG  P+ ITY  +++ LC +G V+ +      +F R   P 
Sbjct: 291 LCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPT 346

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              F +L+ G++  GR  +A  + + M+   G +P+V  Y++LI+G    G +  A+ V 
Sbjct: 347 SVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVL 406

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M    C PNV +Y+ L+DGF K G +  A  + N M ++G  PN V + C++   C+ 
Sbjct: 407 RDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKE 466

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           +   +A  +  +M  + C P+  TFN+ I GLC    +  A+ LL  M     + N  TY
Sbjct: 467 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 526

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L++  LR   +KEA +LV E+   G  L+ +TYN+++ G+CRAG V +A  L  KML 
Sbjct: 527 NTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLR 586

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G    +I+ NI+I   C+ G V  A++    +   G   PDI+++ SL+ G+C +G ++
Sbjct: 587 DGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIE 645

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
           +     +K+  EGI P+  T+N L+
Sbjct: 646 DGLTMFRKLQAEGIPPDTVTYNTLM 670



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 151/540 (27%), Positives = 269/540 (49%), Gaps = 39/540 (7%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G + +  +Y  ++  L +   F  I+ +   MK +G+      +  +++   K       
Sbjct: 100 GYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQT 159

Query: 120 YKLLVEMGN-KGCAPDAVSYTTI----VSSIC-KLGQVEEARELAMRFGSGVSVYNALIN 173
            +L++EM N   C P   SY  +    VS  C K+        L+ +    +  +  ++ 
Sbjct: 160 TRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 219

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
            LC  ++++ A  +L +M   G  PN + Y T+I SL     V  +L +L +MF+ GC P
Sbjct: 220 ALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 279

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +F  ++ G     R +EA+ + NRM+  GF P+ + Y  L++GLC  G +D A  + 
Sbjct: 280 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339

Query: 294 YQMEENSC--------------------------------PPNVTTYSALIDGFAKAGNL 321
           Y++ + +                                  P+V TY++LI G+ K G +
Sbjct: 340 YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLV 399

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++   M + GC PNV +YT +V   C+     +A++L+ +M+ +   PNTV FN  
Sbjct: 400 GLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCL 459

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I   C   R+  A+++  +M +  C P++ T+N L+ GL  V+ +K A  L+ ++   G+
Sbjct: 460 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 519

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N VTYNT+++   R G + EA +L+ +M+ +G+ LD IT+N +I   C+ G+V+ A  
Sbjct: 520 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARS 579

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L +++   G   P  IS   L+ G+C SG ++EA  + ++M+  G  P+  T+N L+  L
Sbjct: 580 LFEKMLRDG-LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 638



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 152/291 (52%), Gaps = 10/291 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ID    LL +M  +G+  +   F  +I+++ +     +A+++F  +   G KP
Sbjct: 430 KLGK---IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  +N ++  L   +       +  +M  +G+  N  TYN L+ A  +   +  A KL+
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG---SGVSVYNALINGLCK 177
            EM  +G   D ++Y +++  +C+ G+V++AR L    +R G   S +S  N LINGLC+
Sbjct: 547 NEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISC-NILINGLCR 605

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
              +EEA     EMV RG  P+++T++++I+ LC  G +E  L +  ++   G  P+  +
Sbjct: 606 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 665

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           + +L+     GG  ++A  L +  I +GF+PN   +S L+  L    ++D 
Sbjct: 666 YNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 142/298 (47%), Gaps = 7/298 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G+  +   Y  LI  L SNG       +  QM++       + + +++  + KAG   
Sbjct: 98  QKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPG 157

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             +++   M +   C P   +Y  ++++L   N    A ++   M     PP   TF   
Sbjct: 158 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 217

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K LC    VD A+ +L  M ++ C+PN   Y  L+  L + NRV EA +L+ E+   G 
Sbjct: 218 MKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 277

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             +  T+N ++ G+C+   + EA +++ +MLI G   D IT+  ++   CK G+V+ A  
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE-GICPNFATWNVLV 558
           L  RI       P  + + +L+ G    G + +A   L  M+   GI P+  T+N L+
Sbjct: 338 LFYRIP-----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 390



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 70/145 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    E+D  + L ++M  +G+  S      +IN   R G+ E+A++    +   G
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +N +++ L    R      ++  ++ +G+ P+  TYN L+  LCK   V  A 
Sbjct: 624 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC 683

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSI 145
            LL E    G  P+  +++ ++ S+
Sbjct: 684 LLLDEGIEDGFVPNDRTWSILLQSL 708


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  334 bits (857), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 192/566 (33%), Positives = 309/566 (54%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I KLG   +   +  LL QMK EG+   E +F+ ++  Y + G   QA+++   +R   
Sbjct: 118 FINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY 177

Query: 61  L-KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           L +PT K Y+ +L+ L+  N   +   ++ +M   G+ P VFT+ I++KALC  N VD A
Sbjct: 178 LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P+++ Y T++ ++ +  QV EA +L      M     V  +N +I+G
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK +KI +A  L+  M+ RG  P+ +TY  ++  LC +G +  +  IL    ++   PN
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKIPCPN 353

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNR-MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
                +L+ GY++ G+  EA    N  MI  GF P++  Y+ L+HGLC  GS+  A  + 
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M    C PNV TY+ L++G  KAG L  A  + + M + G + N V Y C++  LC+ 
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H A +L+ +M  + C P+  T+N+ I GLC   R+D A +L   M     + N  TY
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+  LLR    ++A  LV ++   G  L+ +TYN ++   C+ G + +  +L  +M++
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           +G   D I+ NI+I   CK GKV+NA + L D I  G  + PDI++Y S+L G+C  G +
Sbjct: 594 DGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG--FVPDIVTYNSVLNGLCKVGRI 651

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           +EA     ++  EG+ P+  T+N  +
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 250/503 (49%), Gaps = 10/503 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL+ M   G   +  V+ ++I++  +     +ALK+   +   G  P V+ +N
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L   N+      +   M   G  P+  TY  LL  LC+  +++ A K+L+++   
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP-- 350

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAR----ELAMRFG--SGVSVYNALINGLCKEHKIEE 183
              P+     T+++     GQ++EA+    E  + FG    +  YN L++GLCKE  +  
Sbjct: 351 --CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ EM  RG +PNVITY+ +++ LC  G +E +  +L +M  RG   N   +  L+ 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                 + H A +L + M  +G  P++  Y++LI+GLC    +DEA  + + M  +    
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  TY+ LI    + G    A  + N M+  GC+ + + Y  ++K  C+     +   L 
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E+M  +    +T++ N  I GLC  G+VD A + L        +P+I TYN +L+GL +V
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R+KEA  L   ++  G++ +  TYNT +   C+ GMV +A     + +  G     +T+
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTW 708

Query: 484 NIIIYAYCKQGKVNNAIQLLDRI 506
           N+++Y   KQ    N   +LD +
Sbjct: 709 NVLVYTLLKQSNQENNFFVLDEL 731



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 211/446 (47%), Gaps = 34/446 (7%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
            VY   IN L    K +    LL +M + GI      +  I+      G    ++ +L  
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLD 172

Query: 226 M-FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           M  V  C P   S+  +L+  + G     A++++  M+ +G  P V  +  ++  LC   
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFN 232

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A S+   M ++ C PN   Y  LI   ++   +  A ++   M   GC P+V  + 
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL------ 398
            ++  LC+ N  H A  L+++M      P+ +T+   + GLC  G+++ A K+L      
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP 352

Query: 399 ---------------DQMKQYECL-----------PNITTYNELLDGLLRVNRVKEAFEL 432
                           Q+K+ +             P+I TYN L+ GL +   +  A +L
Sbjct: 353 NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL 412

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           V E+ + G + N++TY  +++G+C+AG++ EA  +L +M   G  ++++ +N +I A C+
Sbjct: 413 VNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCR 472

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           + KV+ A+ LL  +   G   PD+ +Y SL++G+C    + EAF     ML +G   N  
Sbjct: 473 KEKVHVALNLLSEMCTKG-CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 553 TWNVLVRSLFSNLGHLGPVYILDDIM 578
           T+N L+ +L         + +++D++
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDML 557



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 7/301 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G+      Y   I+ L + G       +  QM+E       + +  ++  + KAG   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
            A ++   M +   C P   +Y  ++++L   N    A ++   M  +   P   TF   
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K LC    VD A  LL  M ++ C+PN   Y  L+  L + N+V EA +L+ E+   G 
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ T+N ++HG+C+   + +A +L+ +ML+ G   D +T+  +++  C+ GK+N A +
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL-QKMLNEGICPNFATWNVLVRS 560
           +L +I       P+     +L+ G   SG ++EA  +L + M+N G  P+  T+N+L+  
Sbjct: 345 ILIKIPC-----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399

Query: 561 L 561
           L
Sbjct: 400 L 400



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 5/223 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    L   M ++G   +   + ++I++  R G  ++AL +   +   G       YN
Sbjct: 510 RIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYN 569

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ A            +Y  M  DG+  +  + NI++  LCK  +VD A++ L +  N+
Sbjct: 570 GLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINR 629

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEA 184
           G  PD V+Y ++++ +CK+G+++EA  L  R    GV      YN  I+  CKE  + +A
Sbjct: 630 GFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA 689

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
                  ++ G  P+ +T++ ++ +L    N E +  +L +++
Sbjct: 690 CLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  334 bits (856), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 192/566 (33%), Positives = 309/566 (54%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I KLG   +   +  LL QMK EG+   E +F+ ++  Y + G   QA+++   +R   
Sbjct: 118 FINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVY 177

Query: 61  L-KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           L +PT K Y+ +L+ L+  N   +   ++ +M   G+ P VFT+ I++KALC  N VD A
Sbjct: 178 LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P+++ Y T++ ++ +  QV EA +L      M     V  +N +I+G
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK +KI +A  L+  M+ RG  P+ +TY  ++  LC +G +  +  IL    ++   PN
Sbjct: 298 LCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL----IKIPCPN 353

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNR-MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
                +L+ GY++ G+  EA    N  MI  GF P++  Y+ L+HGLC  GS+  A  + 
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M    C PNV TY+ L++G  KAG L  A  + + M + G + N V Y C++  LC+ 
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H A +L+ +M  + C P+  T+N+ I GLC   R+D A +L   M     + N  TY
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTY 533

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+  LLR    ++A  LV ++   G  L+ +TYN ++   C+ G + +  +L  +M++
Sbjct: 534 NTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIM 593

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           +G   D I+ NI+I   CK GKV+NA + L D I  G  + PDI++Y S+L G+C  G +
Sbjct: 594 DGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG--FVPDIVTYNSVLNGLCKVGRI 651

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           +EA     ++  EG+ P+  T+N  +
Sbjct: 652 KEALNLFDRLQVEGVRPDAFTYNTFI 677



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 250/503 (49%), Gaps = 10/503 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL+ M   G   +  V+ ++I++  +     +ALK+   +   G  P V+ +N
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L   N+      +   M   G  P+  TY  LL  LC+  +++ A K+L+++   
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP-- 350

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAR----ELAMRFG--SGVSVYNALINGLCKEHKIEE 183
              P+     T+++     GQ++EA+    E  + FG    +  YN L++GLCKE  +  
Sbjct: 351 --CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSF 408

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ EM  RG +PNVITY+ +++ LC  G +E +  +L +M  RG   N   +  L+ 
Sbjct: 409 ARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLIC 468

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                 + H A +L + M  +G  P++  Y++LI+GLC    +DEA  + + M  +    
Sbjct: 469 ALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVA 528

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  TY+ LI    + G    A  + N M+  GC+ + + Y  ++K  C+     +   L 
Sbjct: 529 NNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELY 588

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E+M  +    +T++ N  I GLC  G+VD A + L        +P+I TYN +L+GL +V
Sbjct: 589 EQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKV 648

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R+KEA  L   ++  G++ +  TYNT +   C+ GMV +A     + +  G     +T+
Sbjct: 649 GRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTW 708

Query: 484 NIIIYAYCKQGKVNNAIQLLDRI 506
           N+++Y   KQ    N   +LD +
Sbjct: 709 NVLVYTLLKQSNQENNFFVLDEL 731



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 211/446 (47%), Gaps = 34/446 (7%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
            VY   IN L    K +    LL +M + GI      +  I+      G    ++ +L  
Sbjct: 113 DVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLD 172

Query: 226 M-FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           M  V  C P   S+  +L+  + G     A++++  M+ +G  P V  +  ++  LC   
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFN 232

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A S+   M ++ C PN   Y  LI   ++   +  A ++   M   GC P+V  + 
Sbjct: 233 EVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFN 292

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL------ 398
            ++  LC+ N  H A  L+++M      P+ +T+   + GLC  G+++ A K+L      
Sbjct: 293 DVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP 352

Query: 399 ---------------DQMKQYECL-----------PNITTYNELLDGLLRVNRVKEAFEL 432
                           Q+K+ +             P+I TYN L+ GL +   +  A +L
Sbjct: 353 NNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDL 412

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           V E+ + G + N++TY  +++G+C+AG++ EA  +L +M   G  ++++ +N +I A C+
Sbjct: 413 VNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCR 472

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           + KV+ A+ LL  +   G   PD+ +Y SL++G+C    + EAF     ML +G   N  
Sbjct: 473 KEKVHVALNLLSEMCTKG-CKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNV 531

Query: 553 TWNVLVRSLFSNLGHLGPVYILDDIM 578
           T+N L+ +L         + +++D++
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDML 557



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 7/301 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G+      Y   I+ L + G       +  QM+E       + +  ++  + KAG   
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPG 164

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
            A ++   M +   C P   +Y  ++++L   N    A ++   M  +   P   TF   
Sbjct: 165 QAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIV 224

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K LC    VD A  LL  M ++ C+PN   Y  L+  L + N+V EA +L+ E+   G 
Sbjct: 225 MKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGC 284

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ T+N ++HG+C+   + +A +L+ +ML+ G   D +T+  +++  C+ GK+N A +
Sbjct: 285 MPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARK 344

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL-QKMLNEGICPNFATWNVLVRS 560
           +L +I       P+     +L+ G   SG ++EA  +L + M+N G  P+  T+N+L+  
Sbjct: 345 ILIKIPC-----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHG 399

Query: 561 L 561
           L
Sbjct: 400 L 400



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 5/223 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    L   M ++G   +   + ++I++  R G  ++AL +   +   G       YN
Sbjct: 510 RIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYN 569

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ A            +Y  M  DG+  +  + NI++  LCK  +VD A++ L +  N+
Sbjct: 570 GLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINR 629

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEA 184
           G  PD V+Y ++++ +CK+G+++EA  L  R    GV      YN  I+  CKE  + +A
Sbjct: 630 GFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA 689

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
                  ++ G  P+ +T++ ++ +L    N E +  +L +++
Sbjct: 690 CSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDELW 732


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 193/566 (34%), Positives = 315/566 (55%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REF 59
           +I+KLG   +   ++ LL+QMK EG+   E +FI ++  Y + GL  QA ++   +   +
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
              PT K YN +LD L+  +   +   ++ +M   G+ P V+T+ +++KALC  + VD A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P++V Y T++ ++C+  +V EA +L      M     V  +N +I+G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+  +I EA  LL  M+ RG   + +TY  ++  LC +G V+ +  +L ++     NPN
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPN 340

Query: 235 IHSFTSLLKGYLLGGRTHEASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              + +L+ GY+  GR  EA D L+N M+  G+ P+   ++ +I GL   G +  A+ + 
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M      PNV TY+ LI+GF K G L  A++I N M + G S N V Y C++  LC++
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L  +M+ + C P+  TFN+ I GLC   +++ A+ L   M     + N  TY
Sbjct: 461 GNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTY 520

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+   L  + +++AF+LV E+   G  L+ +TYN ++  +C+ G V +   L  +ML 
Sbjct: 521 NTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLG 580

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           +G     I+ NI+I   C+ GKVN+A++ L D I  G    PDI++Y SL+ G+C  G +
Sbjct: 581 KGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG--LTPDIVTYNSLINGLCKMGHV 638

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           QEA     K+ +EGI P+  T+N L+
Sbjct: 639 QEASNLFNKLQSEGIRPDAITYNTLI 664



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 191/369 (51%), Gaps = 10/369 (2%)

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           DP   +Y+ ++  L D      +  +   M  RG +P +++F  ++K   +      A  
Sbjct: 167 DPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACS 226

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L   M + G +PN V Y TLIH LC N  + EA+ +   M    C P+V T++ +I G  
Sbjct: 227 LLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLC 286

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           +AG +  A+++ +RM+  G S + + Y  ++  LC+     +A +L+ K+      PNTV
Sbjct: 287 RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTV 342

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQ---MKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
            +NT I G    GR + A  LL     +  YE  P+  T+N ++DGL++   +  A EL+
Sbjct: 343 LYNTLISGYVASGRFEEAKDLLYNNMVIAGYE--PDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E+     + N++TY  +++G C+ G + EA +++  M  +G  L+ + +N +I A CK 
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G +  A+QL   + G G   PDI ++ SL+ G+C +  M+EA      M  EG+  N  T
Sbjct: 461 GNIEEALQLFGEMSGKG-CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVT 519

Query: 554 WNVLVRSLF 562
           +N LV +  
Sbjct: 520 YNTLVHAFL 528



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 220/489 (44%), Gaps = 45/489 (9%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL+ M   G   +  ++ ++I++        +AL++   +     +P V+ +N
Sbjct: 220 EVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFN 279

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L    R      +   M   G   +  TY  L+  LC+  +VD A  LL ++ N 
Sbjct: 280 DVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN- 338

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-------------------------------- 157
              P+ V Y T++S     G+ EEA++L                                
Sbjct: 339 ---PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVS 395

Query: 158 ---------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                    A RF   V  Y  LING CK+ ++EEA  ++  M  +G+  N + Y+ +I 
Sbjct: 396 ALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLIC 455

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           +LC  GN+E +L + G+M  +GC P+I++F SL+ G     +  EA  L++ M  EG + 
Sbjct: 456 ALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIA 515

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           N V Y+TL+H      S+ +A  +  +M    CP +  TY+ LI    K G +     ++
Sbjct: 516 NTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLF 575

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M+  G  P +++   ++  LC+    + A   ++ M      P+ VT+N+ I GLC  
Sbjct: 576 EEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKM 635

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G V  A  L ++++     P+  TYN L+          +A  L+ +    G   N VT+
Sbjct: 636 GHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTW 695

Query: 449 NTILHGVCR 457
           + +++ + +
Sbjct: 696 SILINYIVK 704



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 7/321 (2%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G+     A   LI  L + G       +  QM++       + +  ++  + KAG   
Sbjct: 92  QKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPG 151

Query: 323 GASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
            A+++   M     C P   +Y  ++ +L   +    A ++   M      P   TF   
Sbjct: 152 QATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVV 211

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K LC    VD A  LL  M ++ C+PN   Y  L+  L   NRV EA +L+ ++     
Sbjct: 212 MKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCC 271

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + ++ T+N ++HG+CRAG + EA +LL +ML+ G   DA+T+  +++  C+ G+V+ A  
Sbjct: 272 EPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARA 331

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL-QKMLNEGICPNFATWNVLVRS 560
           LL++I      NP+ + Y +L+ G   SG  +EA   L   M+  G  P+  T+N+++  
Sbjct: 332 LLNKIP-----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDG 386

Query: 561 LFSNLGHLGPVYILDDIMANK 581
           L      +  + +L++++A +
Sbjct: 387 LVKKGYLVSALELLNEMVAKR 407


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 186/607 (30%), Positives = 319/607 (52%), Gaps = 42/607 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFY-RIREF 59
           +I KLG     D ++ L+ +M+ EG     G+  S I SY R+ L + A  +   ++  F
Sbjct: 96  IIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMF 155

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++   ++YNH+L  L   ++  ++   Y+ M   G+EP+V T+N ++ ALC+  +   A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG----SGVSV-YNALING 174
             +L EM +   APD  ++TT++    + G +E A  L  R      S  SV  N LING
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK  ++ +A   + + +  G +P+ +T+ST ++ LC  G+V+ +L +LG M   GC P+
Sbjct: 276 YCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPD 335

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           ++++++++      G   EA  + N+M+  G LP+   ++TLI  LC+   ++EA+ ++ 
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++      PNV T++ LI+   K G+   A +++  M S+GC+P+ V Y  ++  LC + 
Sbjct: 396 ELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG 455

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A  L+++M    CP +TVT+NT I GLC   R++ A ++ DQM       N  T+N
Sbjct: 456 KLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFN 515

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DGL    R+ +A ELV ++   G+Q N VTYN+IL   C+ G + +A  +L  M   
Sbjct: 516 TLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN 575

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN--------------- 513
           G ++D +T+  +I   CK  +   A++LL  +R  G       +N               
Sbjct: 576 GFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDA 635

Query: 514 -------------PDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVR 559
                        PD  +Y  +  G+C  GG ++EAF +L +M + G  P F+++ +L  
Sbjct: 636 LSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAE 695

Query: 560 SLFSNLG 566
            L  NLG
Sbjct: 696 GLL-NLG 701



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 231/496 (46%), Gaps = 44/496 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M    V+  E  F +++  +   G  E AL++  R+ E G  PT    N +++   
Sbjct: 218 MLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYC 277

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R             DG EP+  T++  +  LC+N  VD A K+L  M  +GC PD  
Sbjct: 278 KLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVY 337

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+T+++ +C  G++EEA+ +  +   SG     + +N LI  LC E+++EEA  L  E+
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+ PNV T++ +I++LC VG+   ++ +  +M   GC P+  ++  L+      G+ 
Sbjct: 398 TVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKL 457

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A DL   M   G   + V Y+T+I GLC    ++EA  V  QM+      N  T++ L
Sbjct: 458 AKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTL 517

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG   A  +  A+++ ++MIS G  PN V Y  ++   C+     +A  +++ M     
Sbjct: 518 IDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR------ 425
             + VT+ T I GLC   R   A+KLL  M+     P    YN ++  L R N       
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637

Query: 426 ------------------------------VKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                                         +KEAF+ + E+   G      ++  +  G+
Sbjct: 638 LFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL 697

Query: 456 CRAGM---VVEAFQLL 468
              GM   ++ A +L+
Sbjct: 698 LNLGMDDYLIRAIELI 713



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 185/409 (45%), Gaps = 5/409 (1%)

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV--DRGIDPNVITYSTIISSLCDVGNV 216
           ++F +G S    L+  L ++   E A  +L   +  D G+ P+   Y  II  L   G  
Sbjct: 48  LKFAAG-SEQERLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAF 106

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRMIREGFLPNVVAYST 275
           +    ++G+M   G    +    S +  Y       +A DL  N++   G   N   Y+ 
Sbjct: 107 DLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNH 166

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           L+  L     +    S   +M      P+V T++ +ID   +A     A  +   M S  
Sbjct: 167 LLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD 226

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            +P+   +T +++   +      A  L  +M+   C P +VT N  I G C  GRV  A+
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
             + Q       P+  T++  ++GL +   V  A +++  + + G + ++ TY+T+++ +
Sbjct: 287 GYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCL 346

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C  G + EA  ++ +M+  G   D  TFN +I A C + ++  A+ L   +   G  +P+
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKG-LSPN 405

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + ++  L+  +C  G    A    ++M + G  P+  T+N+L+ +L S+
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSS 454


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 184/577 (31%), Positives = 322/577 (55%), Gaps = 15/577 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    ++ +M   G   +   + ++++ + RVG  + A+++  ++ E G +P    YN
Sbjct: 129 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 188

Query: 70  HILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           +I+  L +  +      ++  M+  G   P+VFTY+ ++ +L K+ +VD A +L+  M +
Sbjct: 189 NIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVS 248

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEE 183
           KGC+P+ V+Y++++  +CK G+++EA  L  R   SG S     YN +I+G CK  +I+E
Sbjct: 249 KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 308

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A+ LL EMVD G  PNV+TY+ ++ + C  G  E ++G++  M  +G  PN+ ++ SLL 
Sbjct: 309 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 368

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            +        A  L + MI++G +PNVV+Y+T+I GLC    + E V +  QM  N+C P
Sbjct: 369 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 428

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ T++ +ID   K   +  A +++N +  +GC+PN+V Y  +V  LC++  F QA  L+
Sbjct: 429 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 488

Query: 364 EKMAF-ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            +M   + C P+ +T+NT I GLC   RVD A KL  QM      P+  TY+ ++  L +
Sbjct: 489 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              + EA  ++  + K G     +TY T++ G C+ G + +A ++L  +L +G+  D +T
Sbjct: 549 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 608

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           F+I I    K+G++  A +LL+ +   G   PD ++Y +LL G C++   ++A    + M
Sbjct: 609 FSIFIDWLSKRGRLRQAGELLETMLRAG-LVPDTVTYNTLLKGFCDASRTEDAVDLFEVM 667

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
              G  P+ AT+  LV       GHL       D++A
Sbjct: 668 RQCGCEPDNATYTTLV-------GHLVDKKSYKDLLA 697



 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 173/547 (31%), Positives = 294/547 (53%), Gaps = 7/547 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M  +G+    GV  S++      G    A+ + +R       P    YN +++ L   +R
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLSKSDR 59

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 +   M  +G  PNVF+YN +L   CK NRV+ A  LL +M  +GC PD VSYTT
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 141 IVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++ +CKL QV+EA R +      G    V  Y  L++G C+   ++ A  L+ +M +RG
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEA 254
             PN ITY+ I+  LC    ++++L +  +M   G C P++ ++++++   +  G+  +A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L   M+ +G  PNVV YS+L+HGLC  G +DEA ++  +M  + C PN+ TY+ +IDG
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             K G +  A  +   M+  GC PNVV YT ++   C+      A  L+E M  +   PN
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+N+ +   C    V+ A +LL  M Q  C+PN+ +YN ++ GL +  +V E   L+ 
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++       +IVT+NTI+  +C+   V  A++L   +   G   + +T+N +++  CK  
Sbjct: 420 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 479

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           + + A  LL  +      +PDII+Y +++ G+C S  +  A+    +ML++G+ P+  T+
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 539

Query: 555 NVLVRSL 561
           ++++ SL
Sbjct: 540 SIVISSL 546



 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 178/568 (31%), Positives = 314/568 (55%), Gaps = 14/568 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +   +D    LL++M   G + +   + +V++ + +    E AL +  ++   G
Sbjct: 50  MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRG 109

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  +++ L   ++      +   M + G +PNV TY  L+   C+   +DGA 
Sbjct: 110 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV 169

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---GS---GVSVYNALING 174
           +L+ +M  +G  P+A++Y  I+  +C   +++ A +L       GS    V  Y+ +++ 
Sbjct: 170 ELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDS 229

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K  K+++A  L+  MV +G  PNV+TYS+++  LC  G ++ +  +L +M   GC+PN
Sbjct: 230 LVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 289

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I ++ +++ G+   GR  EA  L   M+  G  PNVV Y+ L+   C  G  ++A+ +  
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M E    PN+ TY++L+D F K   +  A Q+ + MI  GC PNVV+Y  ++  LC+  
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             H+   L+E+M   NC P+ VTFNT I  +C   RVD A +L + +++  C PN+ TYN
Sbjct: 410 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 469

Query: 415 ELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            L+ GL +  R  +A  L+ E+  K G   +I+TYNT++ G+C++  V  A++L  +ML 
Sbjct: 470 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 529

Query: 474 EGTKLDAITFNIIIYAYCK---QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           +G   D +T++I+I + CK     + NN ++L+  ++ G  ++P  I+Y +L+ G C +G
Sbjct: 530 DGLAPDDVTYSIVISSLCKWRFMDEANNVLELM--LKNG--FDPGAITYGTLIDGFCKTG 585

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLV 558
            + +A   LQ +L++G  P+  T+++ +
Sbjct: 586 NLDKALEILQLLLSKGSYPDVVTFSIFI 613



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 7/442 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LLQ+M   G S +   + ++I+ + ++G  ++A  +   + + G +P V  Y 
Sbjct: 270 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 329

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LDA     +      +   M   G  PN+FTYN LL   CK + V+ A +LL  M  K
Sbjct: 330 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEA 184
           GC P+ VSY T+++ +CK  +V E   L  +  S      +  +N +I+ +CK ++++ A
Sbjct: 390 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 449

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLK 243
           + L   + + G  PN++TY++++  LC     + +  +L +M  + GC+P+I ++ +++ 
Sbjct: 450 YELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVID 509

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G     R   A  L+ +M+ +G  P+ V YS +I  LC    MDEA +V   M +N   P
Sbjct: 510 GLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDP 569

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
              TY  LIDGF K GNL  A +I   ++S G  P+VV ++  +  L +     QA  L+
Sbjct: 570 GAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELL 629

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E M      P+TVT+NT +KG C   R + A+ L + M+Q  C P+  TY  L+  L+  
Sbjct: 630 ETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDK 689

Query: 424 NRVKEAF-ELVTEIEKCGIQLN 444
              K+   E+   +   G +LN
Sbjct: 690 KSYKDLLAEVSKSMVDTGFKLN 711



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 104/184 (56%), Gaps = 2/184 (1%)

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + ++GLC  G+   A+    +M +  C P+  TYN +++GL + +R+ +A  L+ E+   
Sbjct: 15  SILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 73

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   N+ +YNT+LHG C+A  V  A  LL +M++ G   D +++  +I   CK  +V+ A
Sbjct: 74  GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEA 133

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +++D++   G   P++I+Y +L+ G C  G +  A   ++KM   G  PN  T+N ++ 
Sbjct: 134 CRVMDKMIQRG-CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMH 192

Query: 560 SLFS 563
            L S
Sbjct: 193 GLCS 196


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  322 bits (826), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 180/568 (31%), Positives = 299/568 (52%), Gaps = 16/568 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EID  Q    +M+ + +  +  +   +I+   +   +  AL+ F  ++  G+     IY 
Sbjct: 24  EIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYT 83

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L  E R      I   M+  G EPNV TYN L+  LCKNN  D A +L   M + 
Sbjct: 84  ALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSV 143

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA------------RELAMRFGSGVSVYNALINGLCK 177
            C+P  V+Y T++  + + G++E A             ++  R    V  Y+ LI+GLCK
Sbjct: 144 ECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCK 203

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +++ +A  LL  M  RG  P+VITY+ ++  LC    V  +  +L +M   GC PN+ +
Sbjct: 204 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 263

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + SLL G     R  +A  L   M   G  PNVV Y TLI GLC  G + +A ++   M 
Sbjct: 264 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 323

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    P++  Y+ LI+G  KA  +  +  +  R +S G  P+VV Y+ ++  LC++N   
Sbjct: 324 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 383

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  L+  +    CPP+ + ++T I GLC  G+VD A  L + M    C  ++ TY+ L+
Sbjct: 384 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLI 443

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL +  RV EA  L+  + + G   + +TYN+++ G+C    + EA +L+ +M      
Sbjct: 444 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 503

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIR----GGGEWNPDIISYTSLLWGICNSGGMQ 533
             A+T+NI+I+  C+  +V++A+ LL++ +      G    D I+Y+SL+ G+C +G + 
Sbjct: 504 PSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVA 563

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           EA  Y Q+M++ G+ P+  T+++L+  L
Sbjct: 564 EALDYFQEMIDNGVIPDHITYSILLEGL 591



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 250/485 (51%), Gaps = 49/485 (10%)

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-------------------------------AM 159
           C PD  +Y  ++   C+ G++++A+                                 A+
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64

Query: 160 RF-----GSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           R      GSG+     +Y AL++GL KE ++++A  +L EM D G +PNV+TY+++I  L
Sbjct: 65  RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI-------R 263
           C     + +  +   M    C+P++ ++ +LL G    G+   A  L+  M+        
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +   PNV+ YS LI GLC    + +AV +   M+   C P+V TY+ L+DG  K   +  
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A ++   M+  GC PN+V Y  ++  LC+      A +L+  M    C PN VT+ T I 
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  GRV  A  +L  M      P++  YN L++GL + ++V E+  L+      GI+ 
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++VTY+++++G+CR+  + EA +LL  +   G   D I ++ +I   CK GKV+ A  L 
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + + G G  + D+++Y++L+ G+C +G + EA + L +M+  G  P+  T+N L++ L  
Sbjct: 425 EVMAGDG-CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL-C 482

Query: 564 NLGHL 568
           +L HL
Sbjct: 483 DLNHL 487



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/487 (30%), Positives = 240/487 (49%), Gaps = 52/487 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI---R 57
           +I+ L +  E D  Q L + MK    S S   + ++++   R G  E+A+ +F  +   R
Sbjct: 120 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 179

Query: 58  EFGL----KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN 113
              +     P V  Y+ ++D L   NR S    +  +MK  G  P+V TY IL+  LCK 
Sbjct: 180 SHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 239

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVY 168
           ++V  A+++L EM + GC P+ V+Y +++  +C+  +V +A    R++  R     V  Y
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
             LI+GLCK  ++++A  +L +M+D+G  P+++ Y+ +I+ LC    V+ S+ +L +   
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  P++ +++S++ G     R  EA  L   +   G  P+V+ YSTLI GLC  G +DE
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +   M  + C  +V TYS LIDG  KAG +  A  +  RM+  G  P+ + Y  ++K
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFN----------------------------- 379
            LC  N   +A  L+E+M   NC P+ VT+N                             
Sbjct: 480 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAA 539

Query: 380 -----------TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
                      + I GLC  GRV  A+    +M     +P+  TY+ LL+GL +   + E
Sbjct: 540 GGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599

Query: 429 AFELVTE 435
              LV +
Sbjct: 600 LRHLVLD 606



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 11/277 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D    LL++    G+      + SVI    R    ++A ++   ++  G
Sbjct: 337 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 396

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V +Y+ ++D L    +      +Y  M  DG + +V TY+ L+  LCK  RVD A+
Sbjct: 397 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAH 456

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL  M   G  P  ++Y +++  +C L  ++EA EL               YN LI+G+
Sbjct: 457 LLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 516

Query: 176 CKEHKIEEAFWLLCEMVDR-----GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           C+  +++ A  LL +   R     G   + I YS++I  LC  G V  +L    +M   G
Sbjct: 517 CRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNG 576

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDL-WNRMIREGF 266
             P+  +++ LL+G       HE   L  ++M++ G+
Sbjct: 577 VIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 613


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 180/607 (29%), Positives = 323/607 (53%), Gaps = 42/607 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFY-RIREF 59
           +I+KLG     D ++ L+++M+ EG     GV  S + SY R+   + A+ +   ++  F
Sbjct: 95  IIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTF 154

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++    +YNH+L+ L   +R  ++  +Y+ M   G++P+V T N L+KALC+ ++V  A
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALING 174
             +L EM +   APD  ++TT++    + G +E A  +  +   +G S      N LING
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLING 274

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK  ++E+A   + + +  G +P+ +TY+T +  LC  G+V  +L ++  M   G +P+
Sbjct: 275 YCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPD 334

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +++      G   EA  + N+M+  G LP+   ++TLI  LCS   ++EA+ ++ 
Sbjct: 335 VFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAR 394

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++      P+V T++ LI+   K G+     +++  M S+GC+P+ V Y  ++  LC   
Sbjct: 395 ELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMG 454

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A  L+++M    CP +TVT+NT I  LC   R++ A ++ DQM  +    +  T+N
Sbjct: 455 KLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFN 514

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DGL +  R+ +A EL+ ++ K G+Q + +TYN+IL   C+ G + +A  +L  M   
Sbjct: 515 TLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTAN 574

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN--------------- 513
           G ++D +T+  +I   CK G+   A++LL  +R  G       +N               
Sbjct: 575 GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDA 634

Query: 514 -------------PDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVR 559
                        PD ++Y  +  G+C  GG ++EAF +L +M+N+G  P F+++ +L  
Sbjct: 635 LSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAE 694

Query: 560 SLFSNLG 566
            L  NLG
Sbjct: 695 GLL-NLG 700


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 180/608 (29%), Positives = 327/608 (53%), Gaps = 43/608 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-- 58
           +I KLG    +D ++ L+ +M+ EG     GV  S ++SY    L + A+ +     +  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           FG++    +YNH+L+ L+  ++  ++  +YS M   G++P+V T+N L+KALC+ ++V  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE-----EARELAMRFGSGVSVYNALIN 173
           A  +L EM ++G APD  ++TT++    + G +E     +AR L M   +     N LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CK  ++E+A   + + +  G +P+ ITY+T ++ LC   +V  +L ++  M   G +P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++  ++      G+  EA  + N+M+  G LP++  ++TLI  LC+   ++EA+ ++
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            Q+      P+V T++ LI+   K G+   A +++  M ++GC+P+ V Y  ++  LC  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L++ M    CP +T+T+NT I GLC   R++ A ++ DQM       N  T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+DGL +  ++ +AFEL+ ++   G+Q N +TYN+IL   C+ G + +A  +L  M  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN-------------- 513
            G ++D +T+  +I   CK G+   A+++L  +R  G       +N              
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619

Query: 514 --------------PDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
                         PD ++Y  +  G+C  GG ++EAF ++ +M+++G  P F+++ +L 
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679

Query: 559 RSLFSNLG 566
             L  NLG
Sbjct: 680 EGLL-NLG 686



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 5/402 (1%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           L+  L ++   + A  +L   + R    P    Y  II  L  VG ++    ++ +M   
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE--GFLPNVVAYSTLIHGLCSNGSMD 287
           G    +    S L  Y       +A DL    ++   G   + V Y+ L++ L     M 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
              SV  +M      P+V T++ L+    +A  +  A  +   M S G +P+   +T ++
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +   +      A  +  +M    C    VT N  I G C  GRV+ A+  + Q       
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+  TYN  ++GL + + V  A +++  + + G   ++ TYN +++ +C+ G + EA  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L +M+  G   D  TFN +I A C   ++  A+ L  ++   G  +PD+ ++  L+  +C
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDVYTFNILINALC 402

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             G    A    ++M N G  P+  T+N L+ +L S LG LG
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS-LGKLG 443


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  320 bits (820), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 180/608 (29%), Positives = 327/608 (53%), Gaps = 43/608 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-- 58
           +I KLG    +D ++ L+ +M+ EG     GV  S ++SY    L + A+ +     +  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           FG++    +YNH+L+ L+  ++  ++  +YS M   G++P+V T+N L+KALC+ ++V  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE-----EARELAMRFGSGVSVYNALIN 173
           A  +L EM ++G APD  ++TT++    + G +E     +AR L M   +     N LIN
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CK  ++E+A   + + +  G +P+ ITY+T ++ LC   +V  +L ++  M   G +P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++  ++      G+  EA  + N+M+  G LP++  ++TLI  LC+   ++EA+ ++
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            Q+      P+V T++ LI+   K G+   A +++  M ++GC+P+ V Y  ++  LC  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L++ M    CP +T+T+NT I GLC   R++ A ++ DQM       N  T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+DGL +  ++ +AFEL+ ++   G+Q N +TYN+IL   C+ G + +A  +L  M  
Sbjct: 500 NTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN-------------- 513
            G ++D +T+  +I   CK G+   A+++L  +R  G       +N              
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619

Query: 514 --------------PDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
                         PD ++Y  +  G+C  GG ++EAF ++ +M+++G  P F+++ +L 
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679

Query: 559 RSLFSNLG 566
             L  NLG
Sbjct: 680 EGLL-NLG 686



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 5/402 (1%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           L+  L ++   + A  +L   + R    P    Y  II  L  VG ++    ++ +M   
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE--GFLPNVVAYSTLIHGLCSNGSMD 287
           G    +    S L  Y       +A DL    ++   G   + V Y+ L++ L     M 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
              SV  +M      P+V T++ L+    +A  +  A  +   M S G +P+   +T ++
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLM 223

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +   +      A  +  +M    C    VT N  I G C  GRV+ A+  + Q       
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+  TYN  ++GL + + V  A +++  + + G   ++ TYN +++ +C+ G + EA  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L +M+  G   D  TFN +I A C   ++  A+ L  ++   G  +PD+ ++  L+  +C
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDVYTFNILINALC 402

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             G    A    ++M N G  P+  T+N L+ +L S LG LG
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS-LGKLG 443


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/598 (30%), Positives = 310/598 (51%), Gaps = 45/598 (7%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE--FGLKPTVKIYN 69
           D ++ L+ +M+ EG     GV  S + SY R  L   A+ +     +  FG++    +YN
Sbjct: 95  DLMKVLVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYN 154

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           H+L+ L+  ++  ++  +YS M   G++P+V T+N L+KALC+ ++V  A  +L EM + 
Sbjct: 155 HLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSS 214

Query: 130 GCAPDAVSYTTI-----------------------------------VSSICKLGQVEEA 154
           G APD  ++TT+                                   ++  CKLG+VE+A
Sbjct: 215 GVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDA 274

Query: 155 -----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                +E+A  F      YN  +NGLC+   +  A  ++  MV  G DP+V TY+ +++ 
Sbjct: 275 LGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 334

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G +E + GIL QM  RGC P+I +F +L+     G R  EA DL  ++  +G  P+
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V  ++ LI+ LC  G    A+ +  +M+ + C P+  TY+ LID     G L  A  +  
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M S GC  + V Y  ++  LC+     +A  + ++M  +    N +TFNT I GLC   
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A +L+ QM      PN  TYN +L    +   +K+A +++  +   G ++++VTY 
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T+++G+C+AG    A +LL  M I+G +     +N +I +  ++    +A+ L   +   
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634

Query: 510 GEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           GE  PD  +Y  +  G+C  GG ++EAF +L +M+++G  P F+++ +L   L  NLG
Sbjct: 635 GE-PPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLL-NLG 690



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 148/305 (48%), Gaps = 2/305 (0%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   + V Y+ L++ L     M    +V  +M E    P+V T++ L+    +A  +  A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             +   M S+G +P+   +T +++   +      A  +  +M    C P  VT N  I G
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  GRV+ A+  + Q       P+  TYN  ++GL +   V  A +++  + + G   +
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           + TYN +++ +C+ G + EA  +L +M+  G   D  TFN +I A C   ++  A+ L  
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLAR 384

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++   G  +PD+ ++  L+  +C  G  Q A    ++M + G  P+  T+N L+ +L S 
Sbjct: 385 QVTLKG-LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS- 442

Query: 565 LGHLG 569
           LG LG
Sbjct: 443 LGKLG 447



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 148/322 (45%), Gaps = 9/322 (2%)

Query: 250 RTHEASDLWNRMI-----REGFLPNVVAYSTLIHGLCSNGSMDEAVSV-SYQMEENSCPP 303
           R     D   RM+     RE F P    Y  +I  L +     + + V   +M       
Sbjct: 52  REQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQV 111

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISN--GCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            V    + ++ +A+    + A  +    +    G   + V Y  ++ VL + +      +
Sbjct: 112 RVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLET 171

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +  +M      P+ VTFNT +K LC   +V  A+ +L++M      P+ TT+  L+ G +
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFV 231

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               +K A  +   + + G     VT N +++G C+ G V +A   + + +  G + D I
Sbjct: 232 EEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQI 291

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N  +   C+ G V +A++++D +   G  +PD+ +Y  ++  +C +G ++EA   L +
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGH-DPDVFTYNIVVNCLCKNGQLEEAKGILNQ 350

Query: 542 MLNEGICPNFATWNVLVRSLFS 563
           M+  G  P+  T+N L+ +L S
Sbjct: 351 MVERGCLPDITTFNTLIVALCS 372


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  319 bits (817), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 163/545 (29%), Positives = 291/545 (53%), Gaps = 8/545 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+   + G   +AL+M   + E G+ P V  Y  I+D L    +    + ++  M
Sbjct: 12  TYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G   N   YN L+  LCK+  ++ AYKLL EM +KG  PD ++Y TI+S +C++G+V
Sbjct: 72  IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKV 131

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL--CEMVDRGIDPNVITYS 204
            EA++      +  +   V  YN L++ L KE K+ EA+ L    +M DR + P++ITY+
Sbjct: 132 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I   C V   + ++ +   +  +G  P+  ++ S+L G        EA +++ +M+  
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  PN   YS ++ G C  G+M   + +  +M E    P+V   +A+ID   KA  +  A
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++   M   G  P+VV Y  ++  LC+ N+  +AH L   M    C P+ V+++  + G
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   +V  A  L D+M + + +P++ T+N L+DGL +  ++ EA +L+  + +  +  +
Sbjct: 372 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPD 431

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            VT  T++HG+CR     EA +L   M+ +GT  D +  NI++   C++GK+  A+    
Sbjct: 432 GVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFK 491

Query: 505 R-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             ++  GE++PD+++YT+L+  +  +G + +A  Y Q+M   G  P++  +N L+  L  
Sbjct: 492 SMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRK 551

Query: 564 NLGHL 568
              H+
Sbjct: 552 QGRHI 556



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 257/519 (49%), Gaps = 9/519 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++++L    ++D    L  +M   G S +   + ++IN   +    E+A K+   +   G
Sbjct: 51  IVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 110

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN IL  L    + S     + +M   G  P+V  YN LL AL K  +V  A+
Sbjct: 111 YEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAW 170

Query: 121 KLL--VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALIN 173
            L   ++M ++  APD ++Y T++   C++ + +EA +L     A  +      YN+++ 
Sbjct: 171 GLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILL 230

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GL ++  ++EA  +  +MVD G  PN  TYS ++S  C VGN+   L +  +M  +  +P
Sbjct: 231 GLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSP 290

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++    +++       +  +A  +   M + G +P+VV Y+ L+ GLC    +D+A  + 
Sbjct: 291 DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 350

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M +N C P++ +YS +++G  K   +  A  +++RMI     P+VV +  ++  LC+ 
Sbjct: 351 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 410

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L++ M+  N  P+ VT  T + GLC   R D A++L   M +   + ++  +
Sbjct: 411 GKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPH 470

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           N +L GL R  ++ +A      + K   +   ++VTY T+++ +  AG V +A     +M
Sbjct: 471 NIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQM 530

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
              G   D + +N ++    KQG+   A +L   ++  G
Sbjct: 531 TGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 202/373 (54%), Gaps = 3/373 (0%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G +P+V+TYSTIIS LC  G V  +L ++ +M  +G NP++ ++T ++      G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L+++MI  G   N VAY+ LI+GLC + +++ A  +  +M      P+  TY+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE--KMAF 368
           ++ G  + G +  A Q ++ M S G SP+VVAY  ++  L +     +A  L +   MA 
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+ +T+NT I G C   + D AMKL   +     +P+  TYN +L GL R + + E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A E+  ++   G   N  TY+ +L G CR G +    +L  +M  +    D +  N +I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             CK  KV++A ++L+ +   G   PD+++Y  LL G+C +  + +A      M++ G  
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAV-PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359

Query: 549 PNFATWNVLVRSL 561
           P+  +++V++  L
Sbjct: 360 PDIVSYSVVLNGL 372



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 222/438 (50%), Gaps = 38/438 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F   V  Y+ +I+GLCK  K+ EA  ++ EM ++G++P+V TY+ I+  LC  G V+ + 
Sbjct: 6   FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65

Query: 221 GILGQMFVRGCNPNIHSFTSLL---------------------KGY----------LLG- 248
            +  +M  RGC+ N  ++ +L+                     KGY          L G 
Sbjct: 66  ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125

Query: 249 ---GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPP 303
              G+  EA   ++ M   G+ P+VVAY+ L+  L   G + EA  +  +  M +    P
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ TY+ LIDGF +      A +++  +I+ G  P+ V Y  ++  L + +   +A  + 
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           +KM    C PN  T++  + G C  G +   ++L ++M +    P++   N ++D L + 
Sbjct: 246 KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA 305

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +V +A +++ E+ K G   ++VTYN +L G+C+  +V +A +L   M+  G   D +++
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           ++++   CK  KV++A  L DR+    +  PD++++  L+ G+C +G + EA   L  M 
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMI-ERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424

Query: 544 NEGICPNFATWNVLVRSL 561
              + P+  T   L+  L
Sbjct: 425 EHNVLPDGVTCTTLMHGL 442



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 140/276 (50%), Gaps = 7/276 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D    +L++M   G       +  +++   +  L ++A ++F  + + G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  Y+ +L+ L   N+      ++  M    + P+V T+NIL+  LCK  ++D A 
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGL 175
            LL  M      PD V+ TT++  +C+  + +EA  L    +  G+   V  +N ++ GL
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGL 477

Query: 176 CKEHKIEEAFWLLCEMV--DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C+E K+ +A      MV  D    P+V+TY+T++++L + G V+ ++    QM   GC P
Sbjct: 478 CREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAP 537

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +  ++ +L+ G    GR  +A  L   M  +GFL +
Sbjct: 538 DYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  318 bits (816), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 178/596 (29%), Positives = 314/596 (52%), Gaps = 45/596 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE--FGLKPTVKIYNHI 71
           ++ L+ +M+ EG     GV  S ++SY    L + A+ +     +  FG++    +YNH+
Sbjct: 1   MKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 60

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L+ L+  ++  ++  +YS M   G++P+V T+N L+KALC+ ++V  A  +L EM ++G 
Sbjct: 61  LNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGV 120

Query: 132 APDAVSYTTI-----------------------------------VSSICKLGQVEEA-- 154
           APD  ++TT+                                   ++  CKLG+VE+A  
Sbjct: 121 APDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALG 180

Query: 155 ---RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
              +E+A  F      YN  +NGLC+   +  A  ++  MV  G DP+V TY+ +++ LC
Sbjct: 181 YIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLC 240

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G +E + GIL QM  RGC P+I +F +L+     G R  EA DL  ++  +G  P+V 
Sbjct: 241 KNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVY 300

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++ LI+ LC  G    A+ +  +M+ + C P+  TY+ LID     G L  A  +   M
Sbjct: 301 TFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            S GC  + + Y  ++  LC+     +A  + ++M  +    N +TFNT I GLC   ++
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 420

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A +L++QM      PN  TYN +L    +   +K+A +++  +   G ++++VTY T+
Sbjct: 421 DDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTL 480

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           ++G+C+AG    A ++L  M I+G +     +N ++ +  ++  + +A+ L   +   GE
Sbjct: 481 INGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 540

Query: 512 WNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
             PD ++Y  +  G+C  GG ++EAF ++ +M+++G  P F+++ +L   L  NLG
Sbjct: 541 P-PDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLL-NLG 594



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 158/337 (46%), Gaps = 7/337 (2%)

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIRE--GFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           +HSF    +G  L     +A DL    ++   G   + V Y+ L++ L     M    SV
Sbjct: 20  VHSFLDSYEGQQL---FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESV 76

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M      P+V T++ L+    +A  +  A  +   M S G +P+   +T +++   +
Sbjct: 77  YSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVE 136

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A  +  +M    C    VT N  I G C  GRV+ A+  + Q       P+  T
Sbjct: 137 EGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQIT 196

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN  ++GL + + V  A +++  + + G   ++ TYN +++ +C+ G + EA  +L +M+
Sbjct: 197 YNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   D  TFN +I A C   ++  A+ L  ++   G  +PD+ ++  L+  +C  G  
Sbjct: 257 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDVYTFNILINALCKVGDP 315

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             A    ++M N G  P+  T+N L+ +L S LG LG
Sbjct: 316 HLALRLFEEMKNSGCTPDEVTYNTLIDNLCS-LGKLG 351


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  317 bits (813), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 179/608 (29%), Positives = 326/608 (53%), Gaps = 43/608 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-- 58
           +I KLG    +D ++ L+ +M+ EG     GV  S ++SY    L + A+ +     +  
Sbjct: 80  IIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPL 139

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           FG++    +YNH+L+ L+  ++  ++  +YS M   G++P+V T+N L+KALC+ ++V  
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE-----EARELAMRFGSGVSVYNALIN 173
           A  +L EM ++G APD  ++TT++    + G +E     +AR L M   +     N LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CK  ++E+A   + + +  G +P+ ITY+T ++ LC   +V  +L ++  M   G +P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++  ++      G+  EA  + N+M+  G LP++  ++TLI  LC+   ++EA+ ++
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLA 379

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            Q+      P+V T++ LI+   K G+   A +++  M ++GC+P+ V Y  ++  LC  
Sbjct: 380 RQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSL 439

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L++ M    CP +T+T+NT I GLC   R++ A ++ DQM       N  T+
Sbjct: 440 GKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITF 499

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+DGL +  ++ +AF L+ ++   G+Q N +TYN+IL   C+ G + +A  +L  M  
Sbjct: 500 NTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTA 559

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN-------------- 513
            G ++D +T+  +I   CK G+   A+++L  +R  G       +N              
Sbjct: 560 NGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRD 619

Query: 514 --------------PDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
                         PD ++Y  +  G+C  GG ++EAF ++ +M+++G  P F+++ +L 
Sbjct: 620 ALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLA 679

Query: 559 RSLFSNLG 566
             L  NLG
Sbjct: 680 EGLL-NLG 686



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 180/402 (44%), Gaps = 5/402 (1%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           L+  L ++   + A  +L   + R    P    Y  II  L  VG ++    ++ +M   
Sbjct: 44  LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRRE 103

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE--GFLPNVVAYSTLIHGLCSNGSMD 287
           G    +    S L  Y       +A DL    ++   G   + V Y+ L++ L     M 
Sbjct: 104 GHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMK 163

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
              SV  +M      P+V T++ L+    +A  +  A  +   M S G +P+   +T ++
Sbjct: 164 LLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLM 223

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +   +      A  +  +M    C    VT N  I G C  GRV+ A+  + Q       
Sbjct: 224 QGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFE 283

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+  TYN  ++GL + + V  A +++  + + G   ++ TYN +++ +C+ G + EA  +
Sbjct: 284 PDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 343

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L +M+  G   D  TFN +I A C   ++  A+ L  ++   G  +PD+ ++  L+  +C
Sbjct: 344 LNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG-VSPDVYTFNILINALC 402

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             G    A    ++M N G  P+  T+N L+ +L S LG LG
Sbjct: 403 KVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS-LGKLG 443


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  315 bits (808), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 185/566 (32%), Positives = 305/566 (53%), Gaps = 14/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REF 59
           +I+KLG   E   +  LL+QMK EG    E +FI ++  Y + GL  QA ++   +   +
Sbjct: 100 LIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVY 159

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PT K YN +L+ L+A N   +   ++ +M   G+ P V+T+ +++KA C  N VD A
Sbjct: 160 CFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSA 219

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL +M   GC P+++ Y  ++ ++ +  +V EA +L      M     V  +N +I+G
Sbjct: 220 CSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHG 279

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +I EA  L   M+ R    + +    ++  LC +G V+ +  +L ++     NPN
Sbjct: 280 LCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKI----PNPN 335

Query: 235 IHSFTSLLKGYLLGGRTHEASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              + +L+ GY++ GR  EA D L+  M+  GF P+   ++ +I GLC  G +  A+   
Sbjct: 336 TVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFL 395

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +    PNV TY+ LIDGF K G+   AS++ N M + G S N V Y C++  LC++
Sbjct: 396 DEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  +  +M+ + C P+  TFN+ I GLC   +++ A+ L   M     + N  TY
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+   LR+  +++A +LV E+   G  L+ +TYN ++  +C+ G   +   L+ +M  
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           E       + NI+I ++C+ GKVN+A+Q L D I+ G    PDI++Y SL+ G+C  G  
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRG--LTPDIVTYNSLINGLCKMGRF 633

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           QEA      +  +GI P+  T+N L+
Sbjct: 634 QEALNLFNGLQAKGIHPDAVTYNTLI 659



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 265/561 (47%), Gaps = 17/561 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL+ M   G   +  ++  +I++        +A+K+   +   G +P V+ +N
Sbjct: 215 EVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFN 274

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L    R      ++  M       +      L+  LC+  +VD A  +L ++ N 
Sbjct: 275 DVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN- 333

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEE 183
              P+ V Y T+++     G+ EEA++L  +      F      +N +I+GLCK+  +  
Sbjct: 334 ---PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVS 390

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A   L EMV +G +PNVITY+ +I   C  G+ E +  ++  M  +G + N   +  L+ 
Sbjct: 391 ALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIG 450

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                G+  +A  ++  M  +G  P++  +++LI+GLC N  M+EA+ +   M       
Sbjct: 451 ALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIA 510

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  TY+ LI  F +   +  A ++   M   GC  + + Y  ++K LC+     +   LI
Sbjct: 511 NTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLI 570

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E+M  E   P+  + N  I   C  G+V+ A++ L  M Q    P+I TYN L++GL ++
Sbjct: 571 EQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKM 630

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R +EA  L   ++  GI  + VTYNT++   C  G+  +A QLL K +  G   + IT+
Sbjct: 631 GRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITW 690

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           +I+I  + K    +    +L  +   G W   II + S +   C +  M + F +   ++
Sbjct: 691 SILINYFVKNNSDSEQFTIL--MGNWGFWLAAIIRHVSSIG--CIAIFMWQIFGFPPSII 746

Query: 544 NE---GICPNFATWNVLVRSL 561
           N     +  NFA    L++  
Sbjct: 747 NNLHIAVSGNFAVDTSLLKDF 767



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 193/370 (52%), Gaps = 10/370 (2%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
            +P   +Y+ ++  L      + +  +   M  RG +P +++F  ++K + +      A 
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L   M + G +PN + Y  LIH L  N  ++EA+ +  +M    C P+V T++ +I G 
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            KAG +  A+++ +RM+    + + +    ++  LC+     +A +++ K+      PNT
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNT 336

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQ---MKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           V +NT I G    GR + A  LL +   +  +E  P+  T+N ++DGL +   +  A E 
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE--PDAFTFNIMIDGLCKKGYLVSALEF 394

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+ K G + N++TY  ++ G C+ G   EA +++  M  +G  L+ + +N +I A CK
Sbjct: 395 LDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCK 454

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            GK+ +A+Q+   +   G   PDI ++ SL++G+C +  M+EA    + ML EG+  N  
Sbjct: 455 DGKIQDALQMYGEMSSKG-CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTV 513

Query: 553 TWNVLVRSLF 562
           T+N L+ +  
Sbjct: 514 TYNTLIHAFL 523



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 182/375 (48%), Gaps = 13/375 (3%)

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + RG   +   Y  +I  L +VG  +    +L QM   GC      F  +++ Y   G  
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 252 HEAS----DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            +A+    D+W       F P   +Y+ ++  L +      A +V Y M      P V T
Sbjct: 146 GQATRLLLDMWGVYC---FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYT 202

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           +  ++  F     +  A  +   M  +GC PN + Y  ++  L +NN  ++A  L+E+M 
Sbjct: 203 FGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMF 262

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
              C P+  TFN  I GLC  GR+  A KL D+M   +   +      L+ GL R+ +V 
Sbjct: 263 LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVD 322

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK-MLIEGTKLDAITFNII 486
           EA  ++++I       N V YNT+++G   +G   EA  LL K M+I G + DA TFNI+
Sbjct: 323 EARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIM 378

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I   CK+G + +A++ LD +   G + P++I+YT L+ G C  G  +EA   +  M  +G
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKG-FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437

Query: 547 ICPNFATWNVLVRSL 561
           +  N   +N L+ +L
Sbjct: 438 LSLNTVGYNCLIGAL 452



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 164/322 (50%), Gaps = 5/322 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +K  +      L +M  +G   +   +  +I+ + + G  E+A K+   +   G
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      YN ++ AL  + +      +Y  M   G +P+++T+N L+  LCKN++++ A 
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRF-GSGVS--VYNALINGL 175
            L  +M  +G   + V+Y T++ +  +L  +++A +L   MRF G  +    YN LI  L
Sbjct: 498 GLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK    E+   L+ +M    I P++ + + +I+S C  G V  +L  L  M  RG  P+I
Sbjct: 558 CKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDI 617

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G    GR  EA +L+N +  +G  P+ V Y+TLI   C  G  ++A  + ++
Sbjct: 618 VTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFK 677

Query: 296 MEENSCPPNVTTYSALIDGFAK 317
              N   PN  T+S LI+ F K
Sbjct: 678 GVSNGFIPNEITWSILINYFVK 699



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 151/309 (48%), Gaps = 8/309 (2%)

Query: 256 DLWNRM-IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
           DL+ +  ++ G++ +   Y  LI  L + G       +  QM++  C    + +  ++  
Sbjct: 79  DLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRY 138

Query: 315 FAKAGNLLGASQIWNRMISNGC-SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           + KAG    A+++   M    C  P   +Y  ++++L   N    A ++   M      P
Sbjct: 139 YGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISP 198

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
              TF   +K  C    VD A  LL  M ++ C+PN   Y  L+  L   NRV EA +L+
Sbjct: 199 TVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLL 258

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E+   G + ++ T+N ++HG+C+AG + EA +L  +ML+     DA+    +++  C+ 
Sbjct: 259 EEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRM 318

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK-MLNEGICPNFA 552
           GKV+ A  +L +I      NP+ + Y +L+ G   SG  +EA   L K M+  G  P+  
Sbjct: 319 GKVDEARAMLSKIP-----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAF 373

Query: 553 TWNVLVRSL 561
           T+N+++  L
Sbjct: 374 TFNIMIDGL 382


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/556 (32%), Positives = 288/556 (51%), Gaps = 13/556 (2%)

Query: 18  LQQMKVEG--VSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           L  M V+G   SCS  V  +  VIN +   G  ++A  +F    E G+ P V  YN I+D
Sbjct: 177 LLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFL---EMGVSPDVVTYNTIID 233

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L           ++  M   G++PN  TYN ++  LCK   VD A  +  +M +KG  P
Sbjct: 234 GLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKP 293

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLL 188
             V+Y TI+  +CK   V+ A  +  +    GV      YN +I+GLCK   I++A  + 
Sbjct: 294 SNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVF 353

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+D+G+ P+ +TY+ II  LC   +V+ + G+  QM  +G  PN  ++  L+ GYL  
Sbjct: 354 QQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLST 413

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  E       M      P+V  Y  L+  LC NG  +EA S+   M      P+VT Y
Sbjct: 414 GQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIY 473

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             ++ G+ K G L     + N M++NG SPN   +  ++    +  M  +   +  KM  
Sbjct: 474 GIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQ 533

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PN VT+ T I  LC  GRVD A+   +QM      PN   +N L+ GL  V++ ++
Sbjct: 534 QGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEK 593

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
             EL  E+   GI+ +IV +NT+L  +C+ G V+EA +L+  M+  G K D I++N +I 
Sbjct: 594 VEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLID 653

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            +C   +++ A++LLD +   G   P+I+SY +LL G C +G +  A+   ++ML +G+ 
Sbjct: 654 GHCFASRMDEAVKLLDGMVSAG-LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVT 712

Query: 549 PNFATWNVLVRSLFSN 564
           P   T+N ++  LF +
Sbjct: 713 PGVETYNTILNGLFRS 728



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 175/638 (27%), Positives = 283/638 (44%), Gaps = 76/638 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  E+D  + + QQM  +GV  +   + ++I+   +    + A  +F ++ + G
Sbjct: 231 IIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP+   YN I+D L           ++  M   G++P+  TYN ++  LCK   +D A 
Sbjct: 291 VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAE 350

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
            +  +M +KG  PD ++YT I+  +CK   V+ A  +  +    GV      YN LI+G 
Sbjct: 351 GVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY 410

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               + EE    + EM    ++P+V TY  ++  LC  G    +  +   M  +G  P++
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  +L GY   G   E  DL N M+  G  PN   ++T+I        +DE + +  +
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV-------- 347
           M++    PNV TY  LID   K G +  A   +N+MI+ G +PN V +  +V        
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590

Query: 348 --KV-------------------------LCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
             KV                         LC+     +A  LI+ M      P+ +++NT
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G C   R+D A+KLLD M      PNI +YN LL G  +  R+  A+ L  E+ + G
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKML--------------IEG----------- 475
           +   + TYNTIL+G+ R+G   EA +L   M+              ++G           
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAF 770

Query: 476 ----------TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
                      +LD ITFNI+I    K G+  +A+ L   I   G   P +++Y  +   
Sbjct: 771 KIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANG-LVPSVVTYRLIAEN 829

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           +   G ++E       M   G  PN    N L+R L  
Sbjct: 830 LIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLD 867



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 245/478 (51%), Gaps = 13/478 (2%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRV-DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + G   +    N LLK LC   RV +  + LL +M   GC    VSY T++  +C   + 
Sbjct: 112 KTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRA 171

Query: 152 EEARELAMRFGSG--------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           EEAREL      G        V  YN +ING   E ++++A+ L  EM   G+ P+V+TY
Sbjct: 172 EEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTY 228

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +TII  LC    V+ +  +  QM  +G  PN  ++ +++ G         A  ++ +M+ 
Sbjct: 229 NTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD 288

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G  P+ V Y+T+I GLC   ++D A  V  QM +    P+  TY+ +IDG  KA  +  
Sbjct: 289 KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDK 348

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  ++ +MI  G  P+ + YT ++  LC+     +A  + ++M  +   PN  T+N  I 
Sbjct: 349 AEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH 408

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G    G+ +  ++ + +M  ++  P++ TY  LLD L +  +  EA  L   + + GI+ 
Sbjct: 409 GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  Y  +LHG  + G + E   LL  M+  G   +   FN +I AY K+  ++  + + 
Sbjct: 469 SVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF 528

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +++  G  +P++++Y +L+  +C  G + +A +   +M+NEG+ PN   +N LV  L
Sbjct: 529 IKMKQQG-LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 266/553 (48%), Gaps = 40/553 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + + QQM  +GV  + G +  +I+ Y   G  E+ ++    +    
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK------------ 108
           L+P V  Y  +LD L    + +    ++ +M R G++P+V  Y I+L             
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 109 -----------------------ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                  A  K   +D    + ++M  +G +P+ V+Y T++ ++
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 146 CKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CKLG+V++A  +       GV+    V+N+L+ GLC   K E+   L  EM+++GI P++
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + ++T++ +LC  G V  +  ++  M   G  P++ S+ +L+ G+    R  EA  L + 
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDG 670

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G  PN+V+Y+TL+HG C  G +D A  +  +M      P V TY+ +++G  ++G 
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A +++  MI +    ++  Y+ ++   C+NN F +A  + + +   +   + +TFN 
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GL   GR + AM L   +     +P++ TY  + + L+    ++E   L + +EK G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              N    N ++  +   G +  A   L K+  +   L+A T +++I  + ++    +A 
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAK 910

Query: 501 QLLDRIRGGGEWN 513
            L ++ R   E N
Sbjct: 911 SLPEKCRFFNEAN 923



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 171/372 (45%), Gaps = 43/372 (11%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+  TYS +I   C +G +E      G +                             
Sbjct: 80  VAPDCCTYSIVIGCFCRIGRLELGFAAFGLI----------------------------- 110

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY-QMEENSCPPNVTTYSALIDG 314
                 ++ G+  + +  + L+ GLC    + EA+ V   QM E  C   V +Y+ L+ G
Sbjct: 111 ------LKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKG 164

Query: 315 FAKAGNLLGASQIWNRMIS---NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
                    A ++ + M+    + CSP+VV+Y  ++          +A+SL  +M     
Sbjct: 165 LCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVS-- 222

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ VT+NT I GLC    VD A  +  QM +    PN  TYN ++DGL +   V  A  
Sbjct: 223 -PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEG 281

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++   G++ + VTYNTI+ G+C+A  V  A  +  +M+  G K D +T+N II   C
Sbjct: 282 VFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K   ++ A  +  ++   G   PD ++YT ++ G+C +  +  A    Q+M+++G+ PN 
Sbjct: 342 KAQAIDKAEGVFQQMIDKG-VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNN 400

Query: 552 ATWNVLVRSLFS 563
            T+N L+    S
Sbjct: 401 GTYNCLIHGYLS 412


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/603 (30%), Positives = 310/603 (51%), Gaps = 43/603 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-YRIREFGLK 62
           +LG     D ++ +L+ MK          F+ +I SY +  L ++ L +  + I EFGLK
Sbjct: 92  RLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLK 151

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    YN +L+ L+  N   ++   ++ M   G++P+V T+N+L+KALC+ +++  A  +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 123 LVEMGNKGCAPDAVSYTT-----------------------------------IVSSICK 147
           L +M + G  PD  ++TT                                   IV   CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 148 LGQVEEA----RELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            G+VE+A    +E++ +  F      +N L+NGLCK   ++ A  ++  M+  G DP+V 
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+++IS LC +G V+ ++ +L QM  R C+PN  ++ +L+       +  EA++L   +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G LP+V  +++LI GLC   +   A+ +  +M    C P+  TY+ LID     G L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +  +M  +GC+ +V+ Y  ++   C+ N   +A  + ++M       N+VT+NT 
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC   RV+ A +L+DQM      P+  TYN LL    R   +K+A ++V  +   G 
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + +IVTY T++ G+C+AG V  A +LL  + ++G  L    +N +I    ++ K   AI 
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           L   +    E  PD +SY  +  G+CN GG ++EA  +L ++L +G  P F++  +L   
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691

Query: 561 LFS 563
           L +
Sbjct: 692 LLT 694



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           +  F P    Y  ++  L  +GS D+   +   M+ + C    +T+  LI+ +A+     
Sbjct: 76  KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135

Query: 323 GASQIWNRMISN-GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
               + + MI   G  P+   Y  M+ +L   N          KM+     P+  TFN  
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           IK LC   ++  A+ +L+ M  Y  +P+  T+  ++ G +    +  A  +  ++ + G 
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             + V+ N I+HG C+ G V +A   + +M   +G   D  TFN ++   CK G V +AI
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +++D +   G ++PD+ +Y S++ G+C  G ++EA   L +M+     PN  T+N L+ +
Sbjct: 316 EIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374

Query: 561 L 561
           L
Sbjct: 375 L 375



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 127/253 (50%), Gaps = 7/253 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++D    +L+QM++ G + S   + ++I+ + +     +A ++F  +   G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++D L    R      +   M  +G +P+ +TYN LL   C+   +  A 
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVSV----YNALINGL 175
            ++  M + GC PD V+Y T++S +CK G+VE A +L       G+++    YN +I GL
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620

Query: 176 CKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGN-VETSLGILGQMFVRGCNP 233
            ++ K  EA  L  EM+++    P+ ++Y  +   LC+ G  +  ++  L ++  +G  P
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680

Query: 234 NIHSFTSLLKGYL 246
              S   L +G L
Sbjct: 681 EFSSLYMLAEGLL 693


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  311 bits (798), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 185/603 (30%), Positives = 322/603 (53%), Gaps = 43/603 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++ KLG+      ++ +LQ+MK  G     G F+ +I SY +  L ++A+ +   + E F
Sbjct: 111 VLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEF 170

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           GLK     YN +L+ L+  N+  ++  + S M   G++P+V T+NIL+KALC+ +++  A
Sbjct: 171 GLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPA 230

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG---SGVSVYNALIN 173
             ++ EMG+ G +PD  ++TT++    + G +  A   RE  +  G   S V+V N L++
Sbjct: 231 ILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTV-NVLVH 289

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CKE +IEE    + EM + G  P+  T++++++ LC +G+V+ +L IL  M   G +P
Sbjct: 290 GYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDP 349

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +I ++ SL+ G    G   EA ++ N+MI   F PN V Y+TLI  LC    ++EA  ++
Sbjct: 350 DIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELA 409

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             +      P+V T+++LI G     N   A +++  M + GC P+   Y  ++  LC  
Sbjct: 410 RVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSR 469

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A SL+++M    C  N VT+NT I G C   R++ A ++ D+M+      N+ TY
Sbjct: 470 GRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTY 529

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+DGL +  RV+EA +L+ ++   G++ +  TYN++L   CRAG + +A  ++  M  
Sbjct: 530 NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTS 589

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN-------------- 513
            G + D++T+  +I    K G+V  A +LL  ++  G       +N              
Sbjct: 590 NGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSE 649

Query: 514 --------------PDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
                         PD ++Y  +  G+C+ GG + EA  +L +M ++G  P+F+++ +L 
Sbjct: 650 AVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLA 709

Query: 559 RSL 561
             L
Sbjct: 710 EGL 712



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 259/505 (51%), Gaps = 7/505 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P+  IY  +L  L  +  F  +  +   MK  G E    T+ IL+++  K    D A  +
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 123 LVEMGNK-GCAPDAVSYTTIVSSIC-----KLGQVEEARELAMRFGSGVSVYNALINGLC 176
           +  M  + G   DA +Y  +++ +      KL ++  +R ++      V+ +N LI  LC
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           + H+I  A  ++ EM   G+ P+  T++T++    + GN+  +L I  QM   GC  +  
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +   L+ GY   GR  E     + M  EGF P+   +++L++GLC  G +  A+ +   M
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +    P++ TY++LI G  K G +  A +I N+MI    SPN V Y  ++  LC+ N  
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L   +  +   P+  TFN+ I+GLC       AM+L ++MK   C P+  TYN L
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +D L    R++EA  L+ E+E  G   N+VTYNT++ G C+   + EA ++  +M ++G 
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             + +T+N +I   CK  +V  A QL+D++   G   PD  +Y SLL   C +G +++A 
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG-LKPDKFTYNSLLTYFCRAGDIKKAA 581

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
             +Q M + G  P+  T+  L+  L
Sbjct: 582 DIVQTMTSNGCEPDSVTYGTLILGL 606



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/508 (28%), Positives = 242/508 (47%), Gaps = 45/508 (8%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E+  ++G   + +QM   G   S      +++ Y + G  E+ L     +   G +P   
Sbjct: 258 EEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRF 317

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +N +++ L           I   M ++G +P++FTYN L+  LCK   V+ A ++L +M
Sbjct: 318 TFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM 377

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKI 181
             +  +P+ V+Y T++S++CK  QVEEA ELA    S      V  +N+LI GLC  +  
Sbjct: 378 ILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNH 437

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
             A  L  EM  +G  P+  TY+ +I SLC  G +E +L +L +M   GC+ N+ ++ +L
Sbjct: 438 RLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTL 497

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G+    R  EA ++++ M  +G   NVV Y+TLI GLC N  ++EA  +  QM     
Sbjct: 498 IDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGL 557

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV-------------- 347
            P+  TY++L+  F +AG++  A+ I   M SNGC P+ V Y  ++              
Sbjct: 558 KPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASR 617

Query: 348 ---------------------KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
                                K L +     +A  L  +M  +  PP+ VT+    +GLC
Sbjct: 618 LLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLC 677

Query: 387 -GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
            G G +  A+  L +M     LP+ +++  L +GL  ++      +LV  + K   Q N 
Sbjct: 678 SGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMK---QANF 734

Query: 446 VTYN-TILHGVCRAGMVVEAFQLLGKML 472
                +++ G  +     +A   LG++L
Sbjct: 735 SDSEVSMIMGFLKIRKFQDALATLGRIL 762



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 163/334 (48%), Gaps = 41/334 (12%)

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK-------- 317
           F+P+ V Y  ++  L  +GS      V  +M+   C     T+  LI+ +AK        
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160

Query: 318 ---------------------------AGNLLGASQIWN-RMISNGCSPNVVAYTCMVKV 349
                                       GN L   +I N RM+S G  P+V  +  ++K 
Sbjct: 161 AVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC+ +    A  ++E+M      P+  TF T ++G    G ++ A+++ +QM    C  +
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             T N L+ G  +  R++E    + E+   G + +  T+N++++G+CR G V  A ++L 
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR--IRGGGEWNPDIISYTSLLWGIC 527
            ML EG   D  T+N +I+  CK G+V  A+++L++  +R   +++P+ ++Y +L+  +C
Sbjct: 341 VMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR---DFSPNTVTYNTLISTLC 397

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               ++EA    + + ++GI P+  T+N L++ L
Sbjct: 398 KENQVEEATELARVLTSKGILPDVCTFNSLIQGL 431



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 151/324 (46%), Gaps = 8/324 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++MK +G    E  +  +I+S    G  E+AL +   +   G    V  YN ++D   
Sbjct: 443 LFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      I+  M+  G+  NV TYN L+  LCKN RV+ A +L+ +M  +G  PD  
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y ++++  C+ G +++A ++     S         Y  LI GL K  ++E A  LL  +
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTV 622

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG-R 250
             +G+     TY+ +I +L        ++ +  +M  +G  P+  ++  + +G   GG  
Sbjct: 623 QLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGP 682

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA D    M  +GFLP+  ++  L  GLC+    D  + +  ++ + +   +  +  +
Sbjct: 683 IGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSD--SEVS 740

Query: 311 LIDGFAKAGNLLGASQIWNRMISN 334
           +I GF K      A     R++S+
Sbjct: 741 MIMGFLKIRKFQDALATLGRILSS 764



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 8/190 (4%)

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +DWA K      Q   +P+   Y E+L  L +         ++ E++  G ++   T+  
Sbjct: 92  LDWASK------QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLI 145

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           ++    +  +  EA  ++  M  E G KLDA T+N ++       K+     +  R+   
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G   PD+ ++  L+  +C +  ++ A + +++M + G+ P+  T+  L++         G
Sbjct: 206 G-IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNG 264

Query: 570 PVYILDDIMA 579
            + I + ++A
Sbjct: 265 ALRIREQMVA 274


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  311 bits (798), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 177/610 (29%), Positives = 321/610 (52%), Gaps = 46/610 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-- 58
           +++KLG     D ++ L+++M+ EG      V  S + SY R+   + A+ +     +  
Sbjct: 95  IVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDND 154

Query: 59  -FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            FG++    ++NH+L+ L+  ++  ++  +Y+ M   G++P+V T N L+KALC+ ++V 
Sbjct: 155 TFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVR 214

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNAL 171
            A  +L EM + G APD  ++TT++    + G +E A  +  +        +GV+V N L
Sbjct: 215 TAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTV-NVL 273

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ING CK  ++E+A   + + +  G +P+ +TY+T +  LC  G+V  +L ++  M   G 
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +P++ ++ +++      G   EA  + N+M+  G LP+   ++TLI  L S   ++EA+ 
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALD 393

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           ++ ++      P+V T++ LI+   K G+     +++  M S+GC+P+ V Y  ++  LC
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLC 453

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
                  A  L+ +M    CP +TVT+NT I  LC   R++ A ++ DQM       +  
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAV 513

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+N L+DGL +  R+ +A EL+ ++ K G+Q N +TYN+IL   C+ G + +A  +L  M
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN------------ 513
              G ++D +T+  +I   CK G+   A++LL  +R  G       +N            
Sbjct: 574 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 633

Query: 514 ----------------PDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNV 556
                           PD ++Y  +   +C  GG ++EAF +L +M+N+G  P F+++ +
Sbjct: 634 RDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRM 693

Query: 557 LVRSLFSNLG 566
           L   L  NLG
Sbjct: 694 LAEGLL-NLG 702


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 182/601 (30%), Positives = 307/601 (51%), Gaps = 44/601 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           +L +    D +  LL+Q+K  G   +   F ++I S+      E  LK+     E G KP
Sbjct: 64  QLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILEN--ELGFKP 121

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               YN  L+AL+ +N+  ++  ++S M  +G+  +V T+N+L+KALCK +++  A  +L
Sbjct: 122 DTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILML 181

Query: 124 VEMGNKGCAPDAVSYTT-----------------------------------IVSSICKL 148
            EM N G  PD +++TT                                   +V+  CK 
Sbjct: 182 EEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKE 241

Query: 149 GQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G+VEEA    +      F      +N+L+NG C+   + +A  ++  M+++G DP+V TY
Sbjct: 242 GRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTY 301

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +++IS +C +G  E ++ IL QM +R C+PN  ++ +L+           A+DL   ++ 
Sbjct: 302 NSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVS 361

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G LP+V  ++TLI GLC + + D A+ +  +M+   C P+  TYS LID       L  
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKE 421

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  +   M S+GC+ N V Y  ++  LC++     A  + ++M       ++VT+NT I 
Sbjct: 422 ALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLID 481

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC   RV+ A +L+DQM      P+  TYN LL    RV  +++A ++V  +   G + 
Sbjct: 482 GLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEP 541

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +I TY T++ G+CRAG V  A +LL  + ++G  L    +N +I A   + +    ++L 
Sbjct: 542 DIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLF 601

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             +    +  PD +++  +  G+CN GG +QEA  +  +ML +GI P F ++  L   L 
Sbjct: 602 REMMEKSDP-PDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660

Query: 563 S 563
           S
Sbjct: 661 S 661



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 156/497 (31%), Positives = 255/497 (51%), Gaps = 10/497 (2%)

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV-EMGNK 129
           +L  L   + F  I  +   +K  G  PN  T+  L+++    + ++   K+L  E+G K
Sbjct: 61  LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFK 120

Query: 130 GCAPDAVSYTTIVSSIC---KLGQVEEARELAMRFGS--GVSVYNALINGLCKEHKIEEA 184
              PD   Y   ++++    KL  VE      +  G    VS +N LI  LCK H++  A
Sbjct: 121 ---PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L EM + G+ P+ IT++T++    + G++  +L +  QM   GC     S   L+ G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   GR  EA      +  EGF P+ V +++L++G C  G++++A+ +   M E    P+
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY++LI G  K G    A +I  +MI   CSPN V Y  ++  LC+ N    A  L  
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +  +   P+  TFNT I+GLC     D AM++ ++MK   C P+  TY+ L+D L    
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R+KEA  L+ E+E  G   N V YNT++ G+C++  + +A ++  +M + G    ++T+N
Sbjct: 418 RLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYN 477

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I   CK  +V  A QL+D++   G   PD  +Y SLL   C  G +++A   +Q M +
Sbjct: 478 TLIDGLCKNKRVEEASQLMDQMIMEG-LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS 536

Query: 545 EGICPNFATWNVLVRSL 561
            G  P+  T+  L+  L
Sbjct: 537 NGCEPDIFTYGTLIGGL 553



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 247/546 (45%), Gaps = 48/546 (8%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E+ +++G   + +QM   G   +      ++N + + G  E+AL+    + E G  P   
Sbjct: 205 EEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQV 264

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +N +++        +    I   M   G +P+V+TYN L+  +CK    + A ++L +M
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKI 181
             + C+P+ V+Y T++S++CK  ++E A +LA    S      V  +N LI GLC     
Sbjct: 325 ILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ 384

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  +  EM ++G  P+  TYS +I SLC    ++ +L +L +M   GC  N   + +L
Sbjct: 385 DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G     R  +A +++++M   G   + V Y+TLI GLC N  ++EA  +  QM     
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  TY++L+  F + G++  A  I   M SNGC P++                     
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDI--------------------- 543

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD--QMKQYECLPNITTYNELLDG 419
                          T+ T I GLC  GRVD A KLL   QMK     P+   YN ++  
Sbjct: 544 --------------FTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPH--AYNPVIQA 587

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR-AGMVVEAFQLLGKMLIEGTKL 478
           L    R KE   L  E+ +     + +T+  +  G+C   G + EA     +ML +G   
Sbjct: 588 LFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILP 647

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           +  +F  +    C     +  I+L++ +    + +      TS++ G        +A   
Sbjct: 648 EFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSE---RETSMIRGFLKIRKFNDALAN 704

Query: 539 LQKMLN 544
           L  +L+
Sbjct: 705 LGGILD 710



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 9/358 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLGE    +    +LQQM +   S +   + ++I++  +    E A  +   +   GL P
Sbjct: 310 KLGE---FEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLP 366

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  +N ++  L       +   ++  MK  G +P+ FTY+IL+ +LC   R+  A  LL
Sbjct: 367 DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLL 426

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKE 178
            EM + GCA +AV Y T++  +CK  ++E+A E+  +    GVS     YN LI+GLCK 
Sbjct: 427 KEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKN 486

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            ++EEA  L+ +M+  G+ P+  TY+++++  C VG++E +  I+  M   GC P+I ++
Sbjct: 487 KRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTY 546

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G    GR   AS L   +  +G +    AY+ +I  L       E + +  +M E
Sbjct: 547 GTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMME 606

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLG-ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            S PP+  T+  +  G    G  +  A      M+  G  P   ++  + + LC  +M
Sbjct: 607 KSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSM 664



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 158/322 (49%), Gaps = 38/322 (11%)

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA---KAGNLLG-------- 323
           TL+  L  + S D   ++  Q++ +   PN TT++ LI  F    +  NLL         
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGF 119

Query: 324 ----------------------ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
                                    + ++M++ G   +V  +  ++K LC+ +    A  
Sbjct: 120 KPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAIL 179

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++E+MA     P+ +TF T ++G    G ++ A+K+  QM  Y CL    +   L++G  
Sbjct: 180 MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFC 239

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +  RV+EA   V E+ + G   + VT+N++++G CR G V +A  ++  M+ +G   D  
Sbjct: 240 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY 299

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDR--IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           T+N +I   CK G+   AI++L +  +R   E +P+ ++Y +L+  +C    ++ A    
Sbjct: 300 TYNSLISGMCKLGEFEKAIEILQQMILR---ECSPNTVTYNTLISALCKENEIEAATDLA 356

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
           + ++++G+ P+  T+N L++ L
Sbjct: 357 RILVSKGLLPDVCTFNTLIQGL 378


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 186/624 (29%), Positives = 321/624 (51%), Gaps = 45/624 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR-EF 59
           ++ KLG+  E D ++ +L++MK+          +  I SY   GL  + L+    +  EF
Sbjct: 95  VLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEF 154

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G+      YN +L+ L+  N+  ++   +SNM   G+ P+V T+NIL+KALC+ +++  A
Sbjct: 155 GVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPA 214

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVS-----------------------------------S 144
             L+ EM + G  PD  ++TTI+                                     
Sbjct: 215 ILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNG 274

Query: 145 ICKLGQVEEA----RELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            CK G++EEA     E+++R  F      +N L+NGL K   ++ A  ++  M+  G DP
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           ++ TY+++IS LC +G V+ ++ +L QM  R C+PN  ++ +++       +  EA+ L 
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             +  +G LP+V  Y++LI GLC + +   A+ +  +M+   C P+  TY+ LID     
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G L  A  +   M  +GC+ NV+ Y  ++   C+N    +A  + ++M  +    N+VT+
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           NT I GLC   RV+ A +L+DQM      P+  TYN LL    +   +K+A ++V  +  
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G + +IVTY T++ G+C+AG V  A +LL  + ++G  L    +N +I A  ++ +   
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKE 634

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVL 557
           A++L   +    E  PD ++Y  +  G+C  GG + EA  ++ +ML  G  P F+++ +L
Sbjct: 635 AVRLFREMIEKAEA-PDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYML 693

Query: 558 VRSLFSNLGHLGPVYILDDIMANK 581
              LFS L  +G +  L D++  K
Sbjct: 694 AEGLFS-LAMVGTLIKLIDMVMEK 716



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 204/423 (48%), Gaps = 14/423 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++  M  EG       + S+I+   ++G  ++A+K+  ++ E    P    YN I+  L 
Sbjct: 323 VMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLC 382

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            EN+      +   +   G+ P+V TYN L++ LC +     A +L  EM  KGC PD  
Sbjct: 383 KENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEF 442

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++ S+C  G+++EA  L            V  YN LI+G CK  +I EA  +  +M
Sbjct: 443 TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+  N +TY+T+I  LC    VE +  ++ QM + G  P+  ++ SLL  +   G  
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDI 562

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTTYS 309
            +A+D+   M  +G  P++V Y TLI GLC  G ++ A  +  + QM+  +  P+   Y+
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHA--YN 620

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ-NNMFHQAHSLIEKMAF 368
            +I    +      A +++  MI    +P+ V Y  + + LCQ      +A   + +M  
Sbjct: 621 PVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLE 680

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ-MKQYECLPNITTYNELLDGLLRVNRVK 427
               P   +F    +GL     V   +KL+D  M++ +   N  T   ++ G L++++ +
Sbjct: 681 RGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEVT---MIRGFLKISKYQ 737

Query: 428 EAF 430
           +A 
Sbjct: 738 DAL 740


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  311 bits (796), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 182/603 (30%), Positives = 310/603 (51%), Gaps = 43/603 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFY-RIREFGLK 62
           +LG     D ++ +L+ MK  G       F+ +I SY +  L ++ L + +  I +FGLK
Sbjct: 92  RLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLK 151

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    YN +L+ L+  N   ++   ++ M   G++P+V T+N+L+KALC+ +++  A  +
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 123 LVEMGNKGCAPDAVSYTT-----------------------------------IVSSICK 147
           L +M + G  PD  ++TT                                   IV   CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 148 LGQVEEA----RELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            G+VE+A    +E++ +  F      +N L+NGLCK   ++ A  ++  M+  G DP+V 
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+++IS LC +G V+ ++  L QM  R C+PN  ++ +L+       +  EA++L   +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G LP+V  +++LI GLC   +   A+ +  +M    C P+  TY+ LID     G L
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +  +M  +GC+ +V+ Y  ++   C+ N   +A  + ++M       N+VT+NT 
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC   RV+ A +L+DQM      P+  TYN LL    R   +K+A ++V  +   G 
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + +IVTY T++ G+C+AG V  A +LL  + ++G  L    +N +I    ++ K   AI 
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAIN 631

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           L   +    E  PD +SY  +  G+CN GG ++EA  +L ++L +G  P F++  +L   
Sbjct: 632 LFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEG 691

Query: 561 LFS 563
           L +
Sbjct: 692 LLT 694



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 260/548 (47%), Gaps = 78/548 (14%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC-------------------- 131
           K+    P    Y  +L  L ++   D   K+L +M N GC                    
Sbjct: 75  KKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQ 134

Query: 132 ----------------APDAVSYTTIVSSIC-----KLGQVEEARELAMRFGSGVSVYNA 170
                            PD   Y  +++ +      KL ++  A+         VS +N 
Sbjct: 135 DEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNV 194

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI  LC+ H++  A  +L +M   G+ P+  T++TI+    + G+++ +L I  QM   G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFG 254

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEA 289
           C+ +  S   ++ G+   GR  +A +    M  ++GF P+   ++TL++GLC  G +  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           + +   M +    P+V TY+++I G  K G +  A +  ++MI+  CSPN V Y  ++  
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLIST 374

Query: 350 LCQNNMFHQAH-----------------------------------SLIEKMAFENCPPN 374
           LC+ N   +A                                     L E+M  + C P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+N  I  LC  G++D A+ +L QM+   C  ++ TYN L+DG  + N+++EA E+  
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFD 494

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+E  G+  N VTYNT++ G+C++  V +A QL+ +M++EG K D  T+N ++  +C+ G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGG 554

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            +  A  ++  +   G   PDI++Y +L+ G+C +G ++ A   L+ +  +GI      +
Sbjct: 555 DIKKAADIVQAMTSNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAY 613

Query: 555 NVLVRSLF 562
           N +++ LF
Sbjct: 614 NPVIQGLF 621



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 7/253 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++D    +L+QM++ G + S   + ++I+ + +     +A ++F  +   G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++D L    R    + +   M  +G +P+ FTYN LL   C+   +  A 
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAA 560

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVSV----YNALINGL 175
            ++  M + GC PD V+Y T++S +CK G+VE A +L       G+++    YN +I GL
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGL 620

Query: 176 CKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGN-VETSLGILGQMFVRGCNP 233
            ++ K  EA  L  EM+++    P+ ++Y  +   LC+ G  +  ++  L ++  +G  P
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680

Query: 234 NIHSFTSLLKGYL 246
              S   L +G L
Sbjct: 681 EFSSLYMLAEGLL 693



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 129/273 (47%), Gaps = 11/273 (4%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC----SPNVVAYTCMVKVLCQNNMFHQ 358
           P    Y  ++    ++G+     +I   M ++GC    SP ++      +   Q+ +   
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
            H +I+    +   P+T  +N  +  L     +        +M  +   P+++T+N L+ 
Sbjct: 141 VHWMIDDFGLK---PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIK 197

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L R ++++ A  ++ ++   G+  +  T+ TI+ G    G +  A ++  +M+  G   
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSW 257

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             ++ N+I++ +CK+G+V +A+  +  +     + PD  ++ +L+ G+C +G ++ A   
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           +  ML EG  P+  T+N    S+ S L  LG V
Sbjct: 318 MDVMLQEGYDPDVYTYN----SVISGLCKLGEV 346


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 175/590 (29%), Positives = 305/590 (51%), Gaps = 53/590 (8%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           +M  +GV+ +   + ++IN   +       +++F  + E G  P V  YN ++D+L    
Sbjct: 206 EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 265

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC-------- 131
                  ++ +M      PNV TY++L+  LCK  R+D A +L+ EM  K C        
Sbjct: 266 DLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 325

Query: 132 -------------------------------APDAVSYTTIVSSICKLGQVEEA-----R 155
                                          +PD V+++T++  +CK GQ++EA      
Sbjct: 326 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 385

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            +A  +   V  YNAL+NGLCK  K+E A  ++  MVD+G+ P+VITYS ++ + C    
Sbjct: 386 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 445

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM-IREGFLPNVVAYS 274
           V+ +L +L  M  RGC PN+ +F S++ G     R+ EA  +++ M ++ G +P+ + Y 
Sbjct: 446 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYC 505

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI GL   G   +A ++   M +    P+   ++  I+G +K G++  A Q++NRM+  
Sbjct: 506 TLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLEL 561

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
              P+ V +  ++   C+   F QA +L E+M  +N  P+ +TF   I GLC  G+V+ A
Sbjct: 562 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             +LD M      PN+ TYN L+ GL +  R++EA + + E+   G   + +TY ++++ 
Sbjct: 622 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 681

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +CRA    +A QL+ ++   G   D +T+NI++    K G+   AI +L+ + G G  +P
Sbjct: 682 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGH-HP 740

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKM---LNEGICPNFATWNVLVRSL 561
           D+++Y +L+  +C +G ++EA      M   ++    PN  T++VL+  L
Sbjct: 741 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGL 790



 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 166/533 (31%), Positives = 281/533 (52%), Gaps = 21/533 (3%)

Query: 42   RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
            + G  EQA  +F  +    L+P V  +  ++D L    +      I   M   G+ PNV 
Sbjct: 579  KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 638

Query: 102  TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            TYN L+  LCK+ R++ A + L EM + GC PD+++Y ++V ++C+  + ++A +L    
Sbjct: 639  TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698

Query: 162  GS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             S         YN L++GL K  + E+A  +L EMV +G  P+V+TY+T+I SLC  G++
Sbjct: 699  KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758

Query: 217  ETSLGILGQM---FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG--FLPNVV 271
            E +  + G M     R C PN+ +++ L+ G    GR  EA +L   M+R+    LPN++
Sbjct: 759  EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII 818

Query: 272  AYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSALIDGFAKAGNLLGASQIWN 329
             Y++ + GLC    M EA  +   + + S    P+  T+S LIDG  K G    A  +++
Sbjct: 819  TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878

Query: 330  RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
             MI+ G  PNVV Y  ++  LC+ +   +AH++IE M  +   P+ +T++  +   C   
Sbjct: 879  DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 938

Query: 390  RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQLNIVTY 448
             VD A++LL  M    C PN+ T+N ++DGL + ++  EAF++  ++  K G+  + +TY
Sbjct: 939  HVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITY 998

Query: 449  NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             T++ G+ R G   +A  LL  M       D   FN  I    K G V+ A+  +  +  
Sbjct: 999  CTLIDGLFRTGWAGQAEVLLDAM----PDPDTYAFNCCINGLSKLGDVSRALHRMLEL-- 1052

Query: 509  GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              E  PD +++  L+ G C +G  ++A    ++M+ + + P+  T+  L+  L
Sbjct: 1053 --ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 1103



 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 284/540 (52%), Gaps = 16/540 (2%)

Query: 36  VINSYRRVGLAEQALKMFY-RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           V+ S  R G   +AL++F   +   G+ PT+  YN I++ L   N       ++  +   
Sbjct: 186 VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER 245

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+V TYN L+ +LCK   ++ A +L  +M ++ C P+ V+Y+ +++ +CK+G+++EA
Sbjct: 246 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEA 305

Query: 155 RELAMRFG-------SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG--IDPNVITYST 205
           REL              +  YN+ ++GLCK+    EA  L+  + D    + P+ +T+ST
Sbjct: 306 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC  G ++ +  +   M   G  PN+ ++ +L+ G     +   A  +   M+ +G
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V+ YS L+   C    +DEA+ + + M    C PNV T++++IDG  K+     A 
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485

Query: 326 QIWNRM-ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           Q+++ M + +G  P+ + Y  ++  L +     QA +L++ M      P+T  FN  I G
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCING 541

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G V  A+++ ++M + E +P+  T+N L+ G  +    ++A  L  E+    +Q +
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           ++T+  ++ G+C+AG V  A  +L  M   G   + +T+N +++  CK G++  A Q L+
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G   PD I+Y SL++ +C +    +A   + ++ + G  P+  T+N+LV  L+ +
Sbjct: 662 EMVSSG-CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKS 720



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/569 (28%), Positives = 302/569 (53%), Gaps = 22/569 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLK--PTV 65
            ID  + L+Q+M  +       +    S ++   +  +  +A ++   +R+  L+  P  
Sbjct: 301 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 360

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             ++ ++D L    +      ++ +M   G  PNV TYN L+  LCK ++++ A+ ++  
Sbjct: 361 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 420

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHK 180
           M +KG  PD ++Y+ +V + CK  +V+EA EL     S      V  +N++I+GLCK  +
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 480

Query: 181 IEEAFWLLCEM-VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
             EAF +  +M +  G+ P+ ITY T+I  L   G    +  +L  M     +P+ ++F 
Sbjct: 481 SGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFN 536

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
             + G    G    A  ++NRM+    +P+ V ++ LI G C  G+ ++A ++  +M   
Sbjct: 537 CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +  P+V T+ ALIDG  KAG +  A  I + M + G  PNVV Y  +V  LC++    +A
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
              +E+M    C P+++T+ + +  LC   R D A++L+ ++K +   P+  TYN L+DG
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDG 716

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL- 478
           L +  + ++A  ++ E+   G   ++VTYNT++  +C+AG + EA +L G M    ++  
Sbjct: 717 LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCC 776

Query: 479 --DAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
             + +T++++I   CK G+++ A +L+ + +R   +  P+II+Y S L G+C    M EA
Sbjct: 777 VPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836

Query: 536 FIYLQKMLNEG---ICPNFATWNVLVRSL 561
              L + L +G   + P+  T++ L+  L
Sbjct: 837 -CELMRSLRDGSLRVSPDTVTFSTLIDGL 864



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/544 (29%), Positives = 268/544 (49%), Gaps = 44/544 (8%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G K T+  +N  L+ L+     +    ++ +       PN FTY+ LL+A  K    D  
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG-DVE 164

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMRFGSGVSV--YNALIN 173
             L      +  +     Y  ++ S+C+ G+   A E+      R G   ++  YN +IN
Sbjct: 165 RTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIIN 224

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK +++     L  E+V+RG  P+V+TY+T+I SLC  G++E +  + G M  R C P
Sbjct: 225 GLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVP 284

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREG--FLPNVVAYSTLIHGLCSNGSMDEAVS 291
           N+ +++ L+ G    GR  EA +L   M R+    LPN++ Y++ + GLC      EA  
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344

Query: 292 VSYQMEENS--CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +   + + S    P+  T+S LIDG  K G +  A  +++ MI+ G  PNV+ Y  +V  
Sbjct: 345 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 404

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC+ +   +AH++IE M  +   P+ +T++  +   C   RVD A++LL  M    C PN
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 464

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQLNIVTYNTILHGVCRAGM-------- 460
           + T+N ++DGL + +R  EAF++  ++  K G+  + +TY T++ G+ R G         
Sbjct: 465 VVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524

Query: 461 -----------------------VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
                                  V  A Q+  +ML      D +TFNI+I   CK G   
Sbjct: 525 DAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A  L + +       PD++++ +L+ G+C +G ++ A   L  M N G+ PN  T+N L
Sbjct: 585 QASALFEEMV-AKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNAL 643

Query: 558 VRSL 561
           V  L
Sbjct: 644 VHGL 647



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/512 (28%), Positives = 260/512 (50%), Gaps = 47/512 (9%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ L +  +++  + +L  M   GV  +   + ++++   + G  E+A +    +   G
Sbjct: 608  LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSG 667

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P    Y  ++ AL   +R      + S +K  G +P+  TYNIL+  L K+ + + A 
Sbjct: 668  CVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAI 727

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
             +L EM  KG  PD V+Y T++ S+CK G +EEAR L     S VS         Y+ LI
Sbjct: 728  TVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLI 787

Query: 173  NGLCKEHKIEEAFWLLCEMVDRGID--PNVITYSTIISSLCDVGNVETSLGIL-----GQ 225
            NGLCK  +I+EA  L+ EM+ +  D  PN+ITY++ +  LC    +  +  ++     G 
Sbjct: 788  NGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGS 847

Query: 226  MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
            + V   +P+  +F++L+ G    G+T EA ++++ MI  G++PNVV Y+ L++GLC    
Sbjct: 848  LRV---SPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDK 904

Query: 286  MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
            M+ A ++   M +    P+V TYS L+D F KA ++  A ++ + M S GC+PNVV +  
Sbjct: 905  MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964

Query: 346  MVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-- 402
            ++  LC+++   +A  + + M  ++   P+ +T+ T I GL   G    A  LLD M   
Sbjct: 965  IIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDP 1024

Query: 403  --------------------------QYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
                                      + E +P+  T+N L+ G  +    ++A  L  E+
Sbjct: 1025 DTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM 1084

Query: 437  EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
                +Q +++T+  ++ G+C+AG V   + ++
Sbjct: 1085 VAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 222/427 (51%), Gaps = 11/427 (2%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG-NVETS 219
           F   +  +N  +N L K     +A  L    +     PN  TYST++ +    G +VE +
Sbjct: 107 FKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERT 166

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN-RMIREGFLPNVVAYSTLIH 278
           LG   ++     + ++  +  +L+     G T  A +++   M R+G  P +V Y+T+I+
Sbjct: 167 LGFFRRIRSS--SRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIIN 224

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC +  +   + +  ++ E    P+V TY+ LID   KAG+L  A ++   M S  C P
Sbjct: 225 GLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVP 284

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP--PNTVTFNTFIKGLCGCGRVDWAMK 396
           NVV Y+ ++  LC+     +A  LI++M  ++C   PN +T+N+F+ GLC       A +
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344

Query: 397 LLDQMKQ--YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           L+  ++       P+  T++ L+DGL +  ++ EA  +  ++   G   N++TYN +++G
Sbjct: 345 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 404

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+A  +  A  ++  M+ +G   D IT+++++ A+CK  +V+ A++LL  +   G   P
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG-CTP 463

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKM-LNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           +++++ S++ G+C S    EAF     M L  G+ P+  T+  L+  LF   G  G    
Sbjct: 464 NVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRT-GRAGQAEA 522

Query: 574 LDDIMAN 580
           L D M +
Sbjct: 523 LLDAMPD 529


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 166/598 (27%), Positives = 300/598 (50%), Gaps = 41/598 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +ID    +L + KV G      V+  +  ++ + G  + AL++F  I    
Sbjct: 166 VIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS-- 223

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN I+     +N           M    + P+VFTYNIL+  LCK ++ D A 
Sbjct: 224 --PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKAS 281

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           ++L EM ++G  PD V++ +I+  +CK G+ E A  L               YN LI+GL
Sbjct: 282 EMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+  ++ A  L+ E V  G  P+V+TYS +   LC  G ++ +  ++ +M  +GC PN+
Sbjct: 342 CKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNL 401

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G     +T +A +L   ++  GF+P+VV Y+ ++ GLC  G +D+A+ +   
Sbjct: 402 VTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEG 461

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +  C P+V TY+AL++G  + G +  A  I+  M+S  C+ + +AY  +V   C+++ 
Sbjct: 462 MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 521

Query: 356 FHQAHSLI--------------------------------EKMAFENCPPNTVTFNTFIK 383
             +A  ++                                E MA   C PN  T+N  + 
Sbjct: 522 TKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 581

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G+VD A   L+ M    C+P++ +YN ++DGL + ++ KEA +++ ++ + GI  
Sbjct: 582 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 641

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           + VTYNT++   C+     +A  +L  M+  G   D +T+N +I    +  ++ +A +L+
Sbjct: 642 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 701

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +   G       +Y +++  +C  G +++A + +  M   G+  N  T+N+ +  L
Sbjct: 702 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRL 759



 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 176/568 (30%), Positives = 274/568 (48%), Gaps = 43/568 (7%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G +++   MF R+ + G  P    Y+ ++ +L   N+      +    K  G +P V  Y
Sbjct: 139 GSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVY 198

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL----GQVEEARELAM 159
            IL +A CK  R+  A ++   +     +PDA++Y  I+   C+     G +E  +E+  
Sbjct: 199 TILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNE 254

Query: 160 R-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           R     V  YN LI+GLCK  K ++A  +L EMVDRG+ P+ +T+++I+  LC  G  E 
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  +L  M  R C P+  ++ +L+ G         A DL +  +  GF+P+VV YS L  
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G +DEA  +  +M    C PN+ TY+ LIDG  KA     A ++   ++S+G  P
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +VV YT +V  LC+     +A  ++E M    C P+ +T+   ++GLC  GRVD A  + 
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 399 DQMKQYEC--------------------------------LPNITTYNELLDGLLRVNRV 426
            +M   +C                                 P I  YN L+DG  +  R+
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRL 554

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            E   +  ++   G   NI TYN ++ G+C+ G V EAF  L  M   G   D +++NII
Sbjct: 555 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNII 614

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I    K  K   A Q+LD++   G   PD ++Y +L+   C      +A   L+ M+  G
Sbjct: 615 IDGLFKASKPKEARQVLDQMIQAG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           + P+  T+N L+  L S    LG  Y L
Sbjct: 674 VDPDNVTYNTLISGL-SQTNRLGDAYEL 700



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 307/591 (51%), Gaps = 21/591 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  + D    +L +M   GV+     F S+++   + G  E+A  +   + E  
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P+   YN ++  L  +        +       G  P+V TY+IL   LCK  R+D A+
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +L+ EM  KGC P+ V+Y T++  +CK  + E+A EL     +  F   V  Y  +++GL
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++++A  ++  M+ RG  P+VITY+ ++  LC  G V+ +  I  +M  + C  + 
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ GY    RT EA  + +  IR    P +  Y+ L+ G C  G +DE  +V   
Sbjct: 507 LAYVSLVNGYCKSSRTKEAQKVVDG-IRG--TPYIDVYNALMDGYCKEGRLDEIPNVFED 563

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PN+ TY+ ++DG  K G +  A      M S GC P+VV+Y  ++  L + + 
Sbjct: 564 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 623

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  ++++M     PP+ VT+NT +   C   R D A+ +L  M +    P+  TYN 
Sbjct: 624 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNI-VTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           L+ GL + NR+ +A+EL+ E+ + G  ++   TYNTI+  +C+ G + +A  L+  M   
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLL---DRIRGGGEWNPDIISYTSLLWGICNSGG 531
           G + + +T+NI I   CK+G+++ A  LL   D +R       D +SYT+++ G+C +  
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR-------DEVSYTTVIIGLCKAEQ 796

Query: 532 MQEAFIYLQKMLN-EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +  A    ++M+  +G+C    T+N+L+ + F+    L     L  +M  +
Sbjct: 797 LDRASKLAREMVAVKGLCITSHTFNLLIDA-FTKTKRLDEALTLLGLMVQR 846



 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 169/577 (29%), Positives = 290/577 (50%), Gaps = 11/577 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           + + L ++  ID    L+++M  +G + +   + ++I+   +    E+A ++   +   G
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  I+D L  E R      +   M + G  P+V TY  L++ LC+  RVD A+
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
            +  EM +K C  DA++Y ++V+  CK  + +EA+++   +R    + VYNAL++G CKE
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 551

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +++E   +  +M  RG  PN+ TY+ ++  LC  G V+ +   L  M   GC P++ S+
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++ G     +  EA  + ++MI+ G  P+ V Y+TL+   C     D+AV +   M +
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV-VAYTCMVKVLCQNNMFH 357
               P+  TY+ LI G ++   L  A ++ + M+ NGC  +    Y  ++  LC+     
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 731

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           QA  L++ M       NTVT+N FI  LC  GR+D A  LL +M   + L +  +Y  ++
Sbjct: 732 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVI 788

Query: 418 DGLLRVNRVKEAFELVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
            GL +  ++  A +L  E+    G+ +   T+N ++    +   + EA  LLG M+  G 
Sbjct: 789 IGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGC 848

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
               IT+N++I   CK  KV+ A +L D +   G      +SYT L++G+C  G  +EA 
Sbjct: 849 SPSVITYNMVITCLCKLDKVDKAWELFDEMAVRG-IVASSVSYTVLIYGLCGQGRGKEAL 907

Query: 537 IYLQKMLNEGICPNFATW-NVLVRSLFSNLGHLGPVY 572
             L++M +     +   W +V   S F      GP Y
Sbjct: 908 QVLEEMASSDCEIDDLKWEDVAPHSQFQTT--FGPCY 942


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 161/507 (31%), Positives = 277/507 (54%), Gaps = 12/507 (2%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   ++N ++  L    R      +Y  M  D   P+  TY  L+  L K  R+  A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           ++L EM +    PD  + T +V S+C   +V++AREL          +    Y+AL++GL
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++EA  L+  M +RG  P V+TY++II+  C    V+ + G + QM   GC+P+I
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G+          +L   + R GF P++V YST+I GLC  G + +AV +   
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI--- 236

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            EE SC P   TY++LI G+ +AG++  A ++  +M+ + C+P+VV YT ++   C+   
Sbjct: 237 FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A+ L ++M      P+ VTF + + GLCG GR++ A++LL+++ +  C P I TYN 
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 356

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++DG  + N+V++A ELV +    G   N VTYN ++ G CRAG   +A Q L ++  EG
Sbjct: 357 VVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416

Query: 476 --TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
                    + II+ A C+ G+ ++A+Q  + +   G + P   ++ ++++ +C +   Q
Sbjct: 417 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG-YVPAAATFATVVFALCKAHQPQ 475

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRS 560
           +A   L++M+  G  P   T + +V +
Sbjct: 476 QAHELLEEMIKYGHTPGPGTCDAVVSA 502



 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 233/478 (48%), Gaps = 13/478 (2%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           ++  RR+  A Q L+     R      T+ +   ++ +L   +R      +   M   GM
Sbjct: 49  LSKARRLRDAVQVLQEMVSARHVPDNTTLTV---VVQSLCLGDRVDDARELVEEMLHRGM 105

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-- 154
             N  TY+ L+  LCK  R+D A  L+  M  +GCAP  V+Y +I++  C+  +V+EA  
Sbjct: 106 AANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHG 165

Query: 155 ---RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
              + +A      +  Y ALI G CK   +     LL E+  RG  P+++TYST+I  LC
Sbjct: 166 FMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLC 225

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G +  ++ I  +M    C P   ++ SL+ GY   G   EA  L  +M+ +   P+VV
Sbjct: 226 KAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVV 282

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TL+   C  G +D+A  +  QM  N   P+V T+++L+DG    G +  A ++   +
Sbjct: 283 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              GC P +  Y C+V   C+ N   +A  L+         PNTVT+N  + G C  GR 
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 402

Query: 392 DWAMKLLDQMKQY--ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           D A++ LDQ+      C  ++  Y  +LD L R  R  +A +   E+ + G      T+ 
Sbjct: 403 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           T++  +C+A    +A +LL +M+  G      T + ++ AYC+ G +  A +L   +R
Sbjct: 463 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 255/507 (50%), Gaps = 12/507 (2%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VI    R G    AL ++ ++ +    P    Y  ++  L    R      +   M    
Sbjct: 11  VIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSAR 69

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+  T  +++++LC  +RVD A +L+ EM ++G A +A++Y+ +V  +CK  +++EA 
Sbjct: 70  HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 129

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L            V  YN++I G C+  +++EA   + +MV  G  P++ITY+ +I   
Sbjct: 130 ALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGF 189

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C   +V   L +LG++  RG  P+I ++++++ G    GR  +A D++  M      P  
Sbjct: 190 CKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTA 246

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + Y++LI G C  G MDEA+ +  +M ++ C P+V TY+ L+  F K G L  A +++ +
Sbjct: 247 ITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQ 306

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M++N  SP+VV +T +V  LC       A  L+E++    CPP   T+N  + G C   +
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTY 448
           V  A +L+   +    +PN  TYN L+ G  R  R  +A + + ++   G     ++  Y
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 426

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             IL  +CR G   +A Q   +M+  G    A TF  +++A CK  +   A +LL+ +  
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEA 535
            G   P   +  +++   C +G +Q+A
Sbjct: 487 YGH-TPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 242/472 (51%), Gaps = 10/472 (2%)

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           M P    +N+++  LC+  R+  A  +  +M N    PD ++YT +V  + K  ++ +A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 156 ELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           ++     S   V +      ++  LC   ++++A  L+ EM+ RG+  N ITYS ++  L
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    ++ ++ ++  M  RGC P + ++ S++ G+    R  EA     +M+ EG  P++
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + Y+ LI G C +  +   + +  ++      P++ TYS +IDG  KAG L  A  I+  
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 239

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M    C+P  + Y  ++   C+     +A  L+ KM  + C P+ VT+ T +   C  GR
Sbjct: 240 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A +L  QM   +  P++ T+  L+DGL    R+++A EL+ EI + G    I TYN 
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 356

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG-G 509
           ++ G C+A  V +A +L+      G   + +T+NI++   C+ G+ + A+Q LD++   G
Sbjct: 357 VVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 416

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G     +  Y  +L  +C  G   +A  + ++M+  G  P  AT+  +V +L
Sbjct: 417 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 215/437 (49%), Gaps = 6/437 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG++  +D  + L+++M   G++ +   + ++++   +    ++A+ +   + E G  PT
Sbjct: 86  LGDR--VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPT 143

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN I+       R    +     M  +G  P++ TY  L+   CK+  V    +LL 
Sbjct: 144 VVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLG 203

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIE 182
           E+  +G  PD V+Y+T++  +CK G++ +A ++   M        YN+LI G C+   ++
Sbjct: 204 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMD 263

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  LL +MVD    P+V+TY+T++S+ C +G ++ +  +  QM     +P++ +FTSL+
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    GR  +A +L   + R G  P +  Y+ ++ G C    + +A  +          
Sbjct: 324 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFV 383

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNG--CSPNVVAYTCMVKVLCQNNMFHQAH 360
           PN  TY+ L+ G  +AG    A Q  +++ S G  C  +V  Y  ++  LC++     A 
Sbjct: 384 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 443

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
              E+M      P   TF T +  LC   +   A +LL++M +Y   P   T + ++   
Sbjct: 444 QFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAY 503

Query: 421 LRVNRVKEAFELVTEIE 437
            R   +++A EL +E+ 
Sbjct: 504 CRAGMIQKADELASELR 520


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 176/603 (29%), Positives = 316/603 (52%), Gaps = 43/603 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR-EF 59
           ++ KLG+    + ++ +L++MK+ G     G+F+  + SY +  L ++ + +   +  E+
Sbjct: 103 ILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEY 162

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            +KP  + YN +L+ L+  N+  ++   +S+M R  +  +V T+NIL+KALCK ++V  A
Sbjct: 163 RIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPA 222

Query: 120 YKLLVEMGNKGCAPDAVSYTTI-----------------------------------VSS 144
             ++ EM + G +PD  ++TTI                                   ++ 
Sbjct: 223 ILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLING 282

Query: 145 ICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            CK G++++A       ++  F      YN L+NGLCK    + A  ++  M+  G+DP+
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           + TY+++IS LC +G +E ++ IL QM  R C+PN  ++ +++       R  EA+++  
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +  +G LP+V  +++LI GLC + +   A+ +  +M+   C P+  TY+ LID    + 
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L  A  +   M  NGC+ NVV Y  ++   C+N    +A  + ++M  +    ++VT+N
Sbjct: 463 KLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYN 522

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I GLC   RV+ A +L+DQM      P+  TYN LL    +   +K+A ++V  +   
Sbjct: 523 TLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSS 582

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   +IVTY T++ G+C+AG V  A +LL  + ++G  L    +N +I A  K+ + + A
Sbjct: 583 GCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEA 642

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++L   +    E  PD I+Y  +  G+CN GG + EA  +  +M+  G  P F+++ +L 
Sbjct: 643 MRLFREMLDKSE-PPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLA 701

Query: 559 RSL 561
             L
Sbjct: 702 EGL 704



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 161/533 (30%), Positives = 267/533 (50%), Gaps = 8/533 (1%)

Query: 36  VINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +I + RR      AL++F +  ++    P+  +Y  IL  L     F  +  +   MK  
Sbjct: 67  LIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLS 126

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSIC---KLGQ 150
           G E +   + I +++  K    D    ++  M ++    PD   Y  +++ +    KL  
Sbjct: 127 GCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKL 186

Query: 151 VEEARE--LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           VE A    +  R    VS +N LI  LCK H++  A  ++ EM   G+ P+  T++TI+ 
Sbjct: 187 VESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQ 246

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
              + GN++ +L I  QM   GC     +   L+ G+   GR  +A       + EGF P
Sbjct: 247 GYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRP 306

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +   Y+TL++GLC  G    A+ V   M      P++ TY++LI G  K G +  A +I 
Sbjct: 307 DQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKIL 366

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           ++M+S  CSPN V Y  ++  LC+ N   +A  +   +  +   P+  TFN+ I+GLC  
Sbjct: 367 DQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLS 426

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
                AM L ++MK   C P+  TYN L+D L    +++EA  L+ E+E  G   N+V Y
Sbjct: 427 SNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIY 486

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           NT++ G C+   + EA ++  +M ++G   D++T+N +I   CK  +V +A QL+D++  
Sbjct: 487 NTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM 546

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G   PD  +Y SLL   C +G +++A   +Q M + G  P+  T+  L+  L
Sbjct: 547 EG-LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 268/553 (48%), Gaps = 13/553 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++     ++++M   G+S  E  F +++  Y   G  + AL++  ++ E+G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              T    N +++    + R             +G  P+ FTYN L+  LCK      A 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +++  M   G  PD  +Y +++S +CKLG++EEA ++  +  S         YNA+I+ L
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE++++EA  +   +  +GI P+V T++++I  LC   N ++++ +  +M  +GC P+ 
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDE 448

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+       +  EA +L   M   G   NVV Y+TLI G C N  ++EA  +  +
Sbjct: 449 FTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDE 508

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME      +  TY+ LIDG  K+  +  A+Q+ ++MI  G  P+   Y  ++   C+   
Sbjct: 509 MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGD 568

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD--QMKQYECLPNITTY 413
             +A  +++ M    C P+ VT+ T I GLC  GRV  A +LL   QMK     P+   Y
Sbjct: 569 IKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPH--AY 626

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV-EAFQLLGKML 472
           N ++  L + NR  EA  L  E+       + +TY  +  G+C  G  + EA     +M+
Sbjct: 627 NPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMI 686

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   +  +F ++    C     +  ++L+D I    +++   I   S + G       
Sbjct: 687 ERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREI---STIRGFLKIRKF 743

Query: 533 QEAFIYLQKMLNE 545
           Q+A   L  +L++
Sbjct: 744 QDALSTLGGILDD 756



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 176/368 (47%), Gaps = 2/368 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+   Y  I+  L   G+ E    +L +M + GC  +   F   ++ Y       E   +
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 258 WNRMIREGFL-PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
              M  E  + P+   Y+ L++ L     +    S    M       +V+T++ LI    
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA  +  A  +   M S G SP+   +T +++   +      A  + E+M    CP   V
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T N  I G C  GR+D A+  + +       P+  TYN L++GL ++   K A E+V  +
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
              G+  +I TYN+++ G+C+ G + EA ++L +M+      +A+T+N II + CK+ +V
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRV 394

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A ++   +   G   PD+ ++ SL+ G+C S   + A    ++M  +G  P+  T+N+
Sbjct: 395 DEATEIARLLTSKGIL-PDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNM 453

Query: 557 LVRSLFSN 564
           L+ SL S+
Sbjct: 454 LIDSLCSS 461



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 148/292 (50%), Gaps = 2/292 (0%)

Query: 287 DEAVSVSYQME-ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           DE V +   ME E    P+   Y+ L++    A  L       + M+      +V  +  
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++K LC+ +    A  ++E+M      P+  TF T ++G    G +D A+++ +QM +Y 
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C     T N L++G  +  R+ +A   + E    G + +  TYNT+++G+C+ G    A 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +++  ML+ G   D  T+N +I   CK G++  A+++LD++    + +P+ ++Y +++  
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM-VSRDCSPNAVTYNAIISS 387

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +C    + EA    + + ++GI P+  T+N L++ L  +  H   + + +++
Sbjct: 388 LCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 162/523 (30%), Positives = 285/523 (54%), Gaps = 8/523 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G    AL +F  +   G  P+V  Y+ +LDA    + +     +   M+  G EP++ TY
Sbjct: 176 GRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTY 235

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           N+L+ A+C    VD A  +L ++ + GC PDAV+YT ++ S+C   + +E  EL     S
Sbjct: 236 NVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMAS 295

Query: 164 GVS-----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                    +N ++  LC++  ++ A  ++  M + G  P+++TYS+I+  LCDVG V+ 
Sbjct: 296 NKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDD 355

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ +L ++   GC P+  ++T++LKG     +   A +L   M+     P+ V ++T+I 
Sbjct: 356 AVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIA 415

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            LC  G +D A+ V  QM EN C P++ TY+++IDG      +  A ++ + + S GC P
Sbjct: 416 SLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKP 475

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++V +  ++K LC  + +  A  L+  M   +CPP+  TFNT I  LC  G +  A++ L
Sbjct: 476 DIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETL 535

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M +  C+PN +TYN ++D LL+  + +EA +L++ +   G   +++TYNT++  + +A
Sbjct: 536 KIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN-GTP-DLITYNTVISNITKA 593

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + EA  LL  M+  G   D IT+  + Y  C++   + AI++L R++  G  +PD   
Sbjct: 594 GKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG-LSPDATF 652

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y  +L G C +     A      M++ G  P+ +T+ +L+ +L
Sbjct: 653 YNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 166/562 (29%), Positives = 275/562 (48%), Gaps = 77/562 (13%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + I  + S  RV  AE+           G   TV  YN +++      R      + S M
Sbjct: 103 ILIKRLCSGGRVADAERVFATL------GASATVVTYNTMVNGYCRAGRIEDARRLISGM 156

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
                 P+ FT+N L++ALC   RV  A  +  +M ++GC+P  V+Y+            
Sbjct: 157 P---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSI----------- 202

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                              L++  CK     +A  LL EM  +G +P+++TY+ +I+++C
Sbjct: 203 -------------------LLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMC 243

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           + G+V+ +L IL  +   GC P+  ++T +LK      R  E  +L+  M      P+ V
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV 303

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++T++  LC  G +D A+ V   M E+ C P++ TYS+++DG    G +  A ++ +R+
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL 363

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            S GC P+ +AYT ++K LC    +  A  L+ +M   +CPP+ VTFNT I  LC  G V
Sbjct: 364 KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLV 423

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A+K+++QM +  C P+I TYN ++DGL     + +A EL++ ++  G + +IVT+NT+
Sbjct: 424 DRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTL 483

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC-------------------- 491
           L G+C      +A QL+  M+      DA TFN +I + C                    
Sbjct: 484 LKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGC 543

Query: 492 ---------------KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
                          K GK   A++LL  +  G    PD+I+Y +++  I  +G M+EA 
Sbjct: 544 IPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG---TPDLITYNTVISNITKAGKMEEAL 600

Query: 537 IYLQKMLNEGICPNFATWNVLV 558
             L+ M++ G+ P+  T+  L 
Sbjct: 601 DLLRVMVSNGLSPDTITYRSLA 622



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 249/507 (49%), Gaps = 10/507 (1%)

Query: 5   LGEKCEIDGVQY---LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           L   C+  G +    LL +M+ +G       +  +IN+    G  ++AL +   +   G 
Sbjct: 204 LDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGC 263

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP    Y  +L +L    R+  +  +++ M  +   P+  T+N ++ +LC+   VD A K
Sbjct: 264 KPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIK 323

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLC 176
           ++  M   GC PD V+Y++I+  +C +G+V++A EL  R  S         Y  ++ GLC
Sbjct: 324 VVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC 383

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              + E A  L+ EMV     P+ +T++T+I+SLC  G V+ ++ ++ QM   GCNP+I 
Sbjct: 384 SIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIV 443

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ S++ G        +A +L + +   G  P++V ++TL+ GLCS    ++A  +   M
Sbjct: 444 TYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNM 503

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
             + CPP+ TT++ +I    + G LL A +    M  NGC PN   Y  +V  L +    
Sbjct: 504 MHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKT 563

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L+  M   N  P+ +T+NT I  +   G+++ A+ LL  M      P+  TY  L
Sbjct: 564 QEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSL 621

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
             G+ R +    A  ++  ++  G+  +   YN IL G C+      A      M+  G 
Sbjct: 622 AYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGC 681

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLL 503
             D  T+ I++ A   +  ++ A QLL
Sbjct: 682 MPDESTYIILLEALAYECLLDEAKQLL 708



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 274/574 (47%), Gaps = 21/574 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +  +     +   M   G S S   +  ++++  +     QA+ +   +R  G
Sbjct: 168 LIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG 227

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +  YN +++A+  E        I S++   G +P+  TY  +LK+LC + R     
Sbjct: 228 CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVE 287

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L  EM +  CAPD V++ TIV+S+C+ G V+ A ++            +  Y+++++GL
Sbjct: 288 ELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGL 347

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++++A  LL  +   G  P+ I Y+T++  LC +   E +  ++ +M    C P+ 
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +++      G    A  +  +M   G  P++V Y+++I GLC+   +D+A+ +   
Sbjct: 408 VTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ++   C P++ T++ L+ G         A Q+   M+ + C P+   +  ++  LCQ  +
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             QA   ++ MA   C PN  T+N  +  L   G+   A+KLL  M      P++ TYN 
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT--PDLITYNT 585

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++  + +  +++EA +L+  +   G+  + +TY ++ +G+CR      A ++L ++   G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              DA  +N I+  +C+  + + AI     +   G   PD  +Y  LL          EA
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSG-CMPDESTYIILL----------EA 694

Query: 536 FIYLQKMLNEG--ICPNFATWNVLVRSLFSNLGH 567
             Y + +L+E   +  N  +  VL +SL     H
Sbjct: 695 LAY-ECLLDEAKQLLVNLCSLGVLDKSLIEEESH 727



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 12/169 (7%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCG-----IQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           L  L++   + +A  LV  I   G     + L +V  N ++  +C  G V +A ++   +
Sbjct: 65  LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
              G     +T+N ++  YC+ G++ +A +L+     G  + PD  ++  L+  +C  G 
Sbjct: 125 ---GASATVVTYNTMVNGYCRAGRIEDARRLI----SGMPFPPDTFTFNPLIRALCVRGR 177

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           + +A      ML+ G  P+  T+++L+ +     G+   + +LD++ A 
Sbjct: 178 VPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 226


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 272/497 (54%), Gaps = 5/497 (1%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N +L+ L+  +++S  + ++ +        +  TY+ L+    +  ++  AY+L  EM  
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNR 189

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           KG    A  + +I+  +C  GQ  +A    RE++         YN +INGL K  ++++A
Sbjct: 190 KGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDA 249

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EMVD G  PNV +Y+T++   C    VE +L +L QM  RGC P++ S+T+++ G
Sbjct: 250 IRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVING 309

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  EA  + ++MI+ G  PNV+ Y TL+ G C  G +D AV +  +M E    PN
Sbjct: 310 LCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPN 369

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+ ++  F +  ++  A Q+   MI  GC P+ + Y+ ++   C+     +AH L+E
Sbjct: 370 AITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLE 429

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M    C P+    +T I  LC    +D A +LL      +C P++  Y+ L+  L +  
Sbjct: 430 QMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAK 489

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R+ EA   +  + K     ++VTYN+++ G+C++  + +AF L  +M   G   D +T++
Sbjct: 490 RLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYS 549

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           I+I+++CK   +++A ++L+R++   +  PD+++Y++L+ G+C +G + +AF   Q+ML 
Sbjct: 550 IVIHSFCKDNNLDSAFKMLERMK-EAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG 608

Query: 545 EGICPNFATWNVLVRSL 561
            G  PN  T+N L+  L
Sbjct: 609 CGCAPNLVTYNTLIDGL 625



 Score =  301 bits (772), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 170/545 (31%), Positives = 282/545 (51%), Gaps = 11/545 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+    GV  S++      G    A+ + +R       P    YN +++ L 
Sbjct: 183 LFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAV-LHFREMSKTCPPDSVTYNTMINGLS 241

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R      +   M  +G  PNVF+YN +L   CK NRV+ A  LL +M  +GC PD V
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301

Query: 137 SYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           SYTT+++ +CKL QV+EA R +      G    V  Y  L++G C+   ++ A  L+ +M
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +RG  PN ITY+ I+   C   ++E +  +L  M   GC P+  ++++++ G+   G+ 
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKL 421

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA DL  +MIR G  P+V   STLI  LC   ++D A  +        C P+V  YS L
Sbjct: 422 REAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL 481

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I    KA  L  A    + M+ N C P+VV Y  +V  LC++   + A  L ++M     
Sbjct: 482 IHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGV 541

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ VT++  I   C    +D A K+L++MK+ +C+P++ TY+ L++GL +   V +AF+
Sbjct: 542 MPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  E+  CG   N+VTYNT++ G+C+   V +A ++L  M  +    D+IT+  +I   C
Sbjct: 602 VFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLC 661

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
              ++  A ++L  ++  G   PD ++Y +LL  +  +  ++     ++++L E      
Sbjct: 662 NASRLEEAWRVLREMKDKGCL-PDRMTYGTLLRALQKTNNLE----LVEQLLKEMEATEE 716

Query: 552 ATWNV 556
             WN 
Sbjct: 717 GQWNA 721



 Score =  301 bits (770), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 167/505 (33%), Positives = 282/505 (55%), Gaps = 17/505 (3%)

Query: 68   YNH-------ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            YNH       +L ALL   R      +Y N  +    PN+FT+ IL+  LC+   +  AY
Sbjct: 840  YNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTILIHGLCRAGDIGTAY 897

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---GS---GVSVYNALING 174
            +LL EM   G   + + +  ++  +C   +++ A EL       GS    V  Y+ +++ 
Sbjct: 898  ELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDS 957

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            L K  K+++A  L+ +MV +G  PNV+TYS+++  LC  G ++ +  +L +M   GC+PN
Sbjct: 958  LVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            I ++ +++ G+   GR  EA  L   M+  G  PNVV Y+ L+   C  G  ++A+ +  
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             M E    PN+ TY++L+D F K   +  A Q+ + MI  GC PNVV+Y  ++  LC+  
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 1137

Query: 355  MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              H+   L+E+M   NC P+ VTFNT I  +C   RVD A +L + +++  C PN+ TYN
Sbjct: 1138 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 1197

Query: 415  ELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+ GL +  R  +A  L+ E+  K G   +I+TYNT++ G+C++  V  A++L  +ML 
Sbjct: 1198 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 1257

Query: 474  EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            +G   D +T++I+I + CK   ++ A  +L+ +   G ++P  I+Y +L+ G C +G + 
Sbjct: 1258 DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG-FDPGAITYGTLIDGFCKTGNLD 1316

Query: 534  EAFIYLQKMLNEGICPNFATWNVLV 558
            +A   LQ +L++G  P+  T+++ +
Sbjct: 1317 KALEILQLLLSKGSYPDVVTFSIFI 1341



 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 156/534 (29%), Positives = 273/534 (51%), Gaps = 42/534 (7%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ ++   +   +      ++  M R G++ +   +  +L+ LC   +   A     EM 
Sbjct: 164 YSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM- 222

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIE 182
           +K C PD+V+Y T+++ + K  ++++A  L        F   V  YN +++G CK +++E
Sbjct: 223 SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A WLL +MV RG  P+V++Y+T+I+ LC +  V+ +  ++ +M  RGC PN+ ++ +L+
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+   G    A +L  +M   G+ PN + Y+ ++H  C    M+ A  V   M +  CP
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP 402

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+   YS +I GF KAG L  A  +  +MI  GC P+V   + ++  LC+      A  L
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL 462

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +      +C P+ V ++  I  LC   R+  A   LD M +  C P++ TYN ++DGL +
Sbjct: 463 LRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCK 522

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILH----------------------------- 453
             R+ +AF L   +   G+  ++VTY+ ++H                             
Sbjct: 523 SRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVT 582

Query: 454 ------GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
                 G+C+AG V +AF +  +ML  G   + +T+N +I   CK  KV  A ++L+ +R
Sbjct: 583 YSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMR 642

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                 PD I+YT L+ G+CN+  ++EA+  L++M ++G  P+  T+  L+R+L
Sbjct: 643 KQS-CTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRAL 695



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 152/480 (31%), Positives = 265/480 (55%), Gaps = 8/480 (1%)

Query: 87   IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSI 145
            +   M R G+  NV  +N+++K LC   ++D A +L  EM   G C PD  +Y+TIV S+
Sbjct: 899  LLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSL 958

Query: 146  CKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
             K G+V++A  L     S      V  Y++L++GLCK  K++EA  LL  M   G  PN+
Sbjct: 959  VKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 1018

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            +TY+TII   C +G ++ +  +L +M   GC PN+ ++T LL  +   G+  +A  L   
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 1078

Query: 261  MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
            M+ +G++PN+  Y++L+   C    ++ A  +   M +  C PNV +Y+ +I G  KA  
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138

Query: 321  LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
            +     +  +M+SN C P++V +  ++  +C+      A+ L   +    C PN VT+N+
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198

Query: 381  FIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + GLC   R D A  LL +M + + C P+I TYN ++DGL +  RV  A++L  ++   
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
            G+  + VTY+ ++  +C+   + EA  +L  ML  G    AIT+  +I  +CK G ++ A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318

Query: 500  IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +++L  +   G + PD+++++  +  +   G +++A   L+ ML  G+ P+  T+N L++
Sbjct: 1319 LEILQLLLSKGSY-PDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLK 1377



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 266/495 (53%), Gaps = 9/495 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIRE 58
            +I+ L    ++D    L ++M+  G SC   VF   ++++S  + G  + A ++   +  
Sbjct: 918  VIKGLCSARKLDSALELFKEMEESG-SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVS 976

Query: 59   FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
             G  P V  Y+ +L  L    +      +   M R G  PN+ TYN ++   CK  R+D 
Sbjct: 977  KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDE 1036

Query: 119  AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALIN 173
            AY LL EM + GC P+ V+YT ++ + CK G+ E+A    E+ +  G    +  YN+L++
Sbjct: 1037 AYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 1096

Query: 174  GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
              CK+ ++E A  LL  M+ +G  PNV++Y+T+I+ LC    V   + +L QM    C P
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156

Query: 234  NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
            +I +F +++       R   A +L+N +   G  PN+V Y++L+HGLC +   D+A  + 
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216

Query: 294  YQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M  +  C P++ TY+ +IDG  K+  +  A +++ +M+S+G +P+ V Y+ ++  LC+
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276

Query: 353  NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 +A++++E M      P  +T+ T I G C  G +D A+++L  +      P++ T
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336

Query: 413  YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
            ++  +D L +  R+++A EL+  + + G+  + VTYNT+L G C A +  +A  L   M 
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMR 1396

Query: 473  IEGTKLDAITFNIII 487
              G + D  T+  ++
Sbjct: 1397 QCGCEPDNATYTTLV 1411



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 136/433 (31%), Positives = 232/433 (53%), Gaps = 5/433 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++   +LL+QM   G       + +VIN   ++   ++A ++  ++ + G +P V  Y 
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D             +   M   G  PN  TYN ++   C+ N ++ A+++L  M   
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEA 184
           GC PDA++Y+TI+S  CK G++ EA +L    +R G    V+  + LI+ LCK   I+ A
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSA 459

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL   +     P+V+ YS +I +LC    +  +   L  M    C P++ ++ S++ G
Sbjct: 460 QELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R ++A  L++RM   G +P+VV YS +IH  C + ++D A  +  +M+E  C P+
Sbjct: 520 LCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPD 579

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TYSALI+G  KAG +  A  ++  M+  GC+PN+V Y  ++  LC+ N   QA  ++E
Sbjct: 580 VVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLE 639

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  ++C P+++T+   I GLC   R++ A ++L +MK   CLP+  TY  LL  L + N
Sbjct: 640 IMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTN 699

Query: 425 RVKEAFELVTEIE 437
            ++   +L+ E+E
Sbjct: 700 NLELVEQLLKEME 712



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 268/547 (48%), Gaps = 44/547 (8%)

Query: 19   QQMKVEGVSCSEGV---FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
             Q +V  V+   G     + ++NS      AE AL+       F  K T  +   +L  +
Sbjct: 768  HQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALE------RFTGKLTTTVVGKVLQGV 821

Query: 76   LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
               N  + +        ++G   + +T N LL+AL +  R   A  L V      C+P+ 
Sbjct: 822  --RNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDA--LQVYRNKLCCSPNM 877

Query: 136  VSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
             ++T                               LI+GLC+   I  A+ LL EM   G
Sbjct: 878  FTFTI------------------------------LIHGLCRAGDIGTAYELLKEMPRHG 907

Query: 196  IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEA 254
            +  NVI ++ +I  LC    ++++L +  +M   G C P++ ++++++   +  G+  +A
Sbjct: 908  VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 967

Query: 255  SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
              L   M+ +G  PNVV YS+L+HGLC  G +DEA ++  +M  + C PN+ TY+ +IDG
Sbjct: 968  CRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 1027

Query: 315  FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
              K G +  A  +   M+  GC PNVV YT ++   C+      A  L+E M  +   PN
Sbjct: 1028 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 1087

Query: 375  TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
              T+N+ +   C    V+ A +LL  M Q  C+PN+ +YN ++ GL +  +V E   L+ 
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147

Query: 435  EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            ++       +IVT+NTI+  +C+   V  A++L   +   G   + +T+N +++  CK  
Sbjct: 1148 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207

Query: 495  KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            + + A  LL  +      +PDII+Y +++ G+C S  +  A+    +ML++G+ P+  T+
Sbjct: 1208 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 1267

Query: 555  NVLVRSL 561
            ++++ SL
Sbjct: 1268 SIVISSL 1274



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 170/595 (28%), Positives = 291/595 (48%), Gaps = 37/595 (6%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++D    LLQ+M   G S +   + ++I+ + ++G  ++A  +   + + G +P V  Y 
Sbjct: 998  KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +LDA     +      +   M   G  PN+FTYN LL   CK + V+ A +LL  M  K
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEA 184
            GC P+ VSY T+++ +CK  +V E   L  +  S      +  +N +I+ +CK ++++ A
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIA 1177

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLK 243
            + L   + + G  PN++TY++++  LC     + +  +L +M  + GC+P+I ++ +++ 
Sbjct: 1178 YELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVID 1237

Query: 244  GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            G     R   A  L+ +M+ +G  P+ V YS +I  LC    MDEA +V   M +N   P
Sbjct: 1238 GLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDP 1297

Query: 304  NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
               TY  LIDGF K GNL  A +I   ++S G  P+VV ++  +  L +     QA  L+
Sbjct: 1298 GAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELL 1357

Query: 364  EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            E M      P+TVT+NT +KG C     + A+ L + M+Q  C P+  TY  L+  L+  
Sbjct: 1358 ETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDK 1417

Query: 424  NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE-----GTKL 478
               K   +L+ E+ K  +       N  L     A + VEA   LG  +++     G+  
Sbjct: 1418 KSYK---DLLAEVSKSMVDTGF-KLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQ 1473

Query: 479  DAITF-------NIIIYA-----YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
            DA          N+++++     Y    +   A  L  R+ G     PD +++ SLL   
Sbjct: 1474 DARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLW-RVMGLEGVEPDAVTFLSLLTMC 1532

Query: 527  CNSGGMQEA---FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
            C++G +  A   F+ + +  + G+ P    ++ ++      LG LG V   +D+M
Sbjct: 1533 CHAGLLDAAVDEFVSISR--DYGLEPGVDHFSCVI----DLLGRLGLVNEAEDLM 1581



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 202/401 (50%), Gaps = 5/401 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    ++ +M   G   +   + ++++ + RVG  + A+++  ++ E G +P    YN
Sbjct: 315 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYN 374

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           +I+      N     + +   M + G  P+   Y+ ++   CK  ++  A+ LL +M  +
Sbjct: 375 NIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR 434

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           GC PD    +T++ ++CK   ++ A+EL      M     V  Y+ LI+ LCK  ++ EA
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L  MV     P+V+TY++++  LC    +  +  +  +M   G  P++ +++ ++  
Sbjct: 495 ESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHS 554

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +        A  +  RM     +P+VV YS LI+GLC  G++D+A  V  +M    C PN
Sbjct: 555 FCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPN 614

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+ LIDG  K   +  A+++   M    C+P+ + YTC++  LC  +   +A  ++ 
Sbjct: 615 LVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLR 674

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +M  + C P+ +T+ T ++ L     ++   +LL +M+  E
Sbjct: 675 EMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATE 715



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 168/333 (50%), Gaps = 35/333 (10%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R+G+   +   + L++ L       +A  +     E     +  TYS LI GF +AG +L
Sbjct: 119 RDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKIL 178

Query: 323 GASQIWNRM----------------------------------ISNGCSPNVVAYTCMVK 348
            A ++++ M                                  +S  C P+ V Y  M+ 
Sbjct: 179 PAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMIN 238

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            L +++    A  L+E+M      PN  ++NT + G C   RV+ A+ LL+QM    C P
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ +Y  +++GL ++++V EA  ++ ++ + G Q N++TY T++ G CR G +  A +L+
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            KM   G + +AIT+N I++ +C++  +  A Q+L  +   G   PD I+Y++++ G C 
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTG-CPPDAINYSTIISGFCK 417

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +G ++EA   L++M+  G  P+ A  + L+ +L
Sbjct: 418 AGKLREAHDLLEQMIRRGCRPDVACLSTLIDAL 450



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 204/472 (43%), Gaps = 95/472 (20%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            LL+QM           F ++I++  +    + A ++F  I+E G  P +  YN ++  L 
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204

Query: 77   AENRFSMINPIYSNMKR-DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
               RF     +   M R  G  P++ TYN ++  LCK+ RVD AYKL ++M + G APD 
Sbjct: 1205 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 1264

Query: 136  VSYTTIVSSICKLGQVEEAR---ELAMR--FGSGVSVYNALINGLCKEHKIEEAF----- 185
            V+Y+ ++SS+CK   ++EA    EL ++  F  G   Y  LI+G CK   +++A      
Sbjct: 1265 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 1324

Query: 186  ------------------WL------------LCEMVDRGIDPNVITYSTIISSLCDVGN 215
                              WL            L  M+  G+ P+ +TY+T++   CD   
Sbjct: 1325 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASL 1384

Query: 216  VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA--SDLWNRMIREGFLPNVVAY 273
             E ++ +   M   GC P+  ++T+L+ G+L+  ++++   +++   M+  GF  N    
Sbjct: 1385 TEDAVDLFEVMRQCGCEPDNATYTTLV-GHLVDKKSYKDLLAEVSKSMVDTGFKLNHELS 1443

Query: 274  STL------------------IHGLCSNGS--------MDE----------AVSVSYQME 297
            S L                  + G C +          MD+           V V ++ E
Sbjct: 1444 SKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQE 1503

Query: 298  ENS-----------CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN-GCSPNVVAYTC 345
            E +             P+  T+ +L+     AG L  A   +  +  + G  P V  ++C
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSC 1563

Query: 346  MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            ++ +L +  + ++A  L+  M    C P+  T+N  +     CG  + A+++
Sbjct: 1564 VIDLLGRLGLVNEAEDLMLGMP---CKPSAATWNCLLSAYKICGDFERALRV 1612



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 30/226 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   I+    L  +M+  GV      +  VI+S+ +    + A KM  R++E  
Sbjct: 516 VVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAK 575

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ +++ L           ++  M   G  PN+ TYN L+  LCK N+V+ A 
Sbjct: 576 CVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAA 635

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++L  M  + C PD+++YT +++ +C                      NA         +
Sbjct: 636 EMLEIMRKQSCTPDSITYTCLINGLC----------------------NA--------SR 665

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           +EEA+ +L EM D+G  P+ +TY T++ +L    N+E    +L +M
Sbjct: 666 LEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 172/556 (30%), Positives = 289/556 (51%), Gaps = 12/556 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    LL +M  +       V+  +I    ++G  + A  +   + E    P V  Y  
Sbjct: 108 IDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTS 167

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++      N       +   MK  G+ P+   YN LL  LCK N+++   KLL EM   G
Sbjct: 168 LIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG 227

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             PD  SY T+V+ +C+ G+ EEA     + +  + G  V  YN+L++G CK  K++EA 
Sbjct: 228 REPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAE 287

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL +MV R   P VITY+T+I        +  +  ++  MF  G +P++ ++  LL G 
Sbjct: 288 RLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGL 347

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+  EA +L   M+ +   P+VV YS L++GLC  G +D+A  +   M E  C PN+
Sbjct: 348 CKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNL 407

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ +IDGF KAG +    ++   M    C+P+VV Y+ ++   C+ N    A +++  
Sbjct: 408 VTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL-- 465

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
                  P+  ++++ ++GLC  G+V+ A +++D M +  C P  + Y  ++ GL  V R
Sbjct: 466 ----GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVER 521

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             EA +++  + + G + N+ TY+ +++G+C+   V +A  +L  ML +G   D  T+  
Sbjct: 522 GDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTS 581

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  +CK  K++ A Q    +R  G   PD ++Y  L+ G C SG +++A   +Q ML +
Sbjct: 582 LIDGFCKINKMDAAYQCFKTMRDSG-CEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640

Query: 546 GICPNFATWNVLVRSL 561
           G  P+ AT+  L+RSL
Sbjct: 641 GCNPDAATYFSLMRSL 656



 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 276/522 (52%), Gaps = 12/522 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +ID  + +L+ M           + S+I    +    ++A K+  +++E GL P    YN
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+ L  +N+   ++ +   M   G EP+ F+YN ++  LC++ + + A K+L +M  K
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
            C PD V+Y +++   CK+ +++EA  L       R    V  Y  LI G  +  ++ +A
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           + ++ +M   GI P+++TY+ ++  LC  G +E +  +L  M  + C P++ +++ L+ G
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A  L   M+  G  PN+V ++T+I G C  G +DE   V   M+E SC P+
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPD 441

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TYS LIDG+ KA  +  A  I       G SP+  +Y+ M++ LC      +A  +++
Sbjct: 442 VVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMD 495

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  + CPP +  +   I GLC   R D A+K+L  M +  C PN+ TY+ L++GL +  
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           RV++A  ++  + + G   ++ TY +++ G C+   +  A+Q    M   G + D + +N
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           I+I  +C+ G V  AI+++  +   G  NPD  +Y SL+  +
Sbjct: 616 ILISGFCQSGNVEKAIEVMQLMLEKG-CNPDAATYFSLMRSL 656



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 271/515 (52%), Gaps = 15/515 (2%)

Query: 53  FYRIR-EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC 111
           F+R R     KP+   Y  ++          M+  I + M      P+V T+N +LKA C
Sbjct: 11  FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVS 166
           +   +D A       G   C+P A +Y  ++  +C+  +++EA +L             +
Sbjct: 71  QIGDLDRALSHF--RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA 128

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           VYN LI GLCK  KI+ A  +L  M++R   P+VITY+++I   C    ++ +  ++ +M
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM 188

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G  P+  ++ +LL G     +  E S L   M+  G  P+  +Y+T++  LC +G  
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA  +  +M E  C P+V TY++L+DGF K   +  A ++   M+   C+P V+ YT +
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +    + +    A+ ++E M      P+ VT+N  + GLC  G+++ A +LL+ M + +C
Sbjct: 309 IGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P++ TY+ L++GL ++ +V +A  L+  + + G Q N+VT+NT++ G C+AG V E  +
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L  M       D +T++ +I  YCK  ++ +A  +L         +PD  SY+S+L G+
Sbjct: 429 VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILG-------ISPDKASYSSMLEGL 481

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C++G ++EA   +  M  +G  P  + + +++  L
Sbjct: 482 CSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGL 516



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 252/474 (53%), Gaps = 10/474 (2%)

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           D  +P+  TY  L+    +        ++  EM  +  +PD +++ TI+ + C++G ++ 
Sbjct: 18  DPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDR 77

Query: 154 AREL---AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           A       M        Y  LI+GLC+  +I+EA+ LL EM+ +   P+   Y+ +I+ L
Sbjct: 78  ALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C +G ++ +  +L  M  R C P++ ++TSL+ G        EA  L  +M   G  P+ 
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDT 197

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           VAY+ L++GLC    ++E   +  +M E    P+  +Y+ ++    ++G    A +I  +
Sbjct: 198 VAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEK 257

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           MI   C P+VV Y  ++   C+ +   +A  L+E M    C P  +T+ T I G     R
Sbjct: 258 MIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A ++++ M +    P++ TYN LLDGL +  +++EA EL+  + +     ++VTY+ 
Sbjct: 318 LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++G+C+ G V +A  LL  ML  G + + +TFN +I  +CK GKV+   ++L+ ++   
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              PD+++Y++L+ G C +  MQ+AF  L      GI P+ A+++ ++  L S 
Sbjct: 438 -CTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCST 484



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 3/204 (1%)

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           + +S   +   +   P+  T+   I G    G     +++ ++M      P++ T+N +L
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
               ++  +  A         C       TY  ++HG+C+   + EA+QLL +M+ +   
Sbjct: 67  KAYCQIGDLDRALSHFRGKMWCSP--TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            DA  +N +I   CK GK++ A  +L ++       PD+I+YTSL+ G C +  + EA  
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVL-KMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
            ++KM   G+ P+   +N L+  L
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGL 207


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  305 bits (781), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 174/519 (33%), Positives = 268/519 (51%), Gaps = 9/519 (1%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG---MEPNVFTYNILLK 108
           +  R+ EFG  P V   N +L  L  E R      +   M  DG     PNV TYN ++ 
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GS 163
            LCK   VD A  +L  M +KG   D V+Y+TI+  +CK   V+ A  +           
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            V  YN +I+GLCK   ++ A  +L  M+D+G+ P+V+TY+TII  LC    V+ + G+L
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +   P+I ++  L+ GYL  G   E       M   G  P+VV YS L+  LC N
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G   EA  + Y M      PNVT Y  L+ G+A  G +   + + + M++NG SPN   +
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++    +  M  +A  +  +M+     P+ VT+   I  LC  GRVD A+   +QM  
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN   +N L+ GL  V+R ++A EL  E+   G++ N+V +NTI+  +C  G V+ 
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A +L+  M   G + + I++N +I  +C  G+ + A QLLD +   G   PD+ISY +LL
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG-LKPDLISYDTLL 626

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            G C +G +  A+   ++ML +G+ P   T++ +++ LF
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 284/556 (51%), Gaps = 11/556 (1%)

Query: 17  LLQQMKVEGV-SCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           LL  M  +G  +C+  V  + ++I+   +    ++A  +   + + G+K  V  Y+ I+D
Sbjct: 183 LLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIID 242

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L           +  +M   G++P+V TYN ++  LCK   VD A  +L  M +KG  P
Sbjct: 243 GLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 302

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLL 188
           D V+Y TI+  +CK   V+ A  +            +  YN LI+G     + +E    L
Sbjct: 303 DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL 362

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM  RG+DP+V+TYS ++  LC  G    +  I   M  +G  PN+  +  LL GY   
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAAR 422

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   + +DL + M+  G  PN   ++ ++        +DEA+ +  +M ++   P+V TY
Sbjct: 423 GAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             LID   K G +  A   +N+MI++G +PN V +  +V  LC  + + +A  L  +M  
Sbjct: 483 GILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWD 542

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PN V FNT +  LC  G+V  A +L+D M++    PN+ +YN L+ G     R  E
Sbjct: 543 QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDE 602

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A +L+  +   G++ ++++Y+T+L G C+ G +  A+ L  +ML +G    A+T++ I+ 
Sbjct: 603 AAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQ 662

Query: 489 AYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
                 + + A +L L+ I+ G +W  DI +Y  +L G+C +  + EAF   Q + ++ +
Sbjct: 663 GLFHTRRFSEAKELYLNMIKSGQQW--DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDL 720

Query: 548 CPNFATWNVLVRSLFS 563
            PN  T+ +++  LF 
Sbjct: 721 RPNIITFTIMIDVLFK 736



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 268/602 (44%), Gaps = 41/602 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +LQ M  +GV      + ++I+   +    ++A  +   + + G
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  YN I+D L           +  +M   G++P+V TYN ++  LCK   VD A 
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGL 175
            +L  M +K   PD  +Y  ++      G+ +E  R L   +  G    V  Y+ L++ L
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K  EA  +   M+ +GI PNV  Y  ++      G +     +L  M   G +PN 
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNN 444

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           + F  +L  Y       EA  +++RM + G  P+VV Y  LI  LC  G +D+AV    Q
Sbjct: 445 YIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQ 504

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   PN   +++L+ G         A +++  M   G  PNVV +  ++  LC    
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ---------YEC 406
              A  LI+ M      PN +++NT I G C  GR D A +LLD M           Y+ 
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624

Query: 407 L--------------------------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
           L                          P   TY+ +L GL    R  EA EL   + K G
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSG 684

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
            Q +I TYN IL+G+C+   V EAF++   +  +  + + ITF I+I    K G+  +A+
Sbjct: 685 QQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAM 744

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            L   I   G   P++++Y  ++  I   G + E       M   G  P+    N ++RS
Sbjct: 745 DLFASIPSHG-LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRS 803

Query: 561 LF 562
           L 
Sbjct: 804 LL 805



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 248/493 (50%), Gaps = 5/493 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L++M   G+      +  +++   + G   +A K+FY +   G+KP V IY  +L    A
Sbjct: 362 LEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAA 421

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
               + +  +   M  +G+ PN + +NI+L A  K   +D A  +   M   G +PD V+
Sbjct: 422 RGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVT 481

Query: 138 YTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  ++ ++CKLG+V++A  +       GV+    V+N+L+ GLC   + E+A  L  EM 
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW 541

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           D+G+ PNV+ ++TI+ +LC+ G V  +  ++  M   G  PN+ S+ +L+ G+ L GRT 
Sbjct: 542 DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTD 601

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA+ L + M+  G  P++++Y TL+ G C  G +D A  +  +M      P   TYS ++
Sbjct: 602 EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G         A +++  MI +G   ++  Y  ++  LC+ N   +A  + + +  ++  
Sbjct: 662 QGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN +TF   I  L   GR   AM L   +  +  +PN+ TY  ++  +++   + E   L
Sbjct: 722 PNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNL 781

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              +EK G   + V  N I+  +   G ++ A   L K+      L+A T +++I  + +
Sbjct: 782 FLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841

Query: 493 QGKVNNAIQLLDR 505
           +   N+A  L ++
Sbjct: 842 EEYKNHAKSLPEK 854



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/555 (25%), Positives = 257/555 (46%), Gaps = 16/555 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    +LQ M  + V      +  +I+ Y   G  ++ ++    +   G
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y+ +LD L    + +    I+  M R G++PNV  Y ILL        +    
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLT 429

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
            LL  M   G +P+   +  ++ +  K   ++EA  +  R         V  Y  LI+ L
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A     +M++ G+ PN + +++++  LC V   E +  +  +M+ +G  PN+
Sbjct: 490 CKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNV 549

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F +++      G+   A  L + M R G  PNV++Y+TLI G C  G  DEA  +   
Sbjct: 550 VFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDV 609

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P++ +Y  L+ G+ K G +  A  ++  M+  G +P  V Y+ +++ L     
Sbjct: 610 MVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRR 669

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A  L   M       +  T+N  + GLC    VD A K+   +   +  PNI T+  
Sbjct: 670 FSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTI 729

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++D L +  R K+A +L   I   G+  N+VTY  ++  + + G++ E   L   M   G
Sbjct: 730 MIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG 789

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI-ISYTSLLWGIC------- 527
              D++  N II +   +G++  A   L +I    E N  +  S TSLL  +        
Sbjct: 790 CTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI---DEMNFSLEASTTSLLISLFSREEYKN 846

Query: 528 NSGGMQEAFIYLQKM 542
           ++  + E +++L+++
Sbjct: 847 HAKSLPEKYLFLEEV 861



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 167/322 (51%), Gaps = 13/322 (4%)

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIH----GLCSNGSMDEAVSVSYQMEE---NSCPPNV 305
           +A  L++ ++      +V A++ L++      CS+ S + AVS+  +M     N   P++
Sbjct: 32  DALKLFDELLPHARPASVRAFNHLLNVVARARCSSTS-ELAVSLFNRMARACSNKVRPDL 90

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS-LIE 364
            TYS L   F + G +      +  ++  G   N V    ++  LC      +A   L+ 
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY---ECLPNITTYNELLDGLL 421
           +M    C PN V+ NT +KGLC   RV+ A++LL  M +     C PN+ TYN ++DGL 
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   V  A  ++  +   G++L++VTY+TI+ G+C+A  V  A  +L  M+ +G K D +
Sbjct: 211 KAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 270

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N II   CK   V+ A  +L  +   G   PD+++Y +++ G+C +  +  A   LQ 
Sbjct: 271 TYNTIIDGLCKAQAVDRAEGVLQHMIDKG-VKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 542 MLNEGICPNFATWNVLVRSLFS 563
           M+++ + P+  T+N L+    S
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLS 351


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 183/605 (30%), Positives = 308/605 (50%), Gaps = 44/605 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI--RE 58
           ++ +L      D +  LL+QM    +   E  F+  + +Y         +   + +  R+
Sbjct: 98  LLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERD 157

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           F +KP  + YN  L  L+  N+  ++  ++S M  D + P+V T+NIL++ALCK +++  
Sbjct: 158 FAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRP 217

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG---SGVSVYNALI 172
           A  +L +M N G  PD  ++TT++    +   VE A   +EL +  G   + VSV N L+
Sbjct: 218 AILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSV-NVLV 276

Query: 173 NGLCKEHKIEEAFWLLCE---------------------------------MVDRGIDPN 199
           NGLCKE +IEEA   + E                                 M+++G + +
Sbjct: 277 NGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELD 336

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V TY+++IS LC +G ++ ++ IL  M  R C PN  ++ +L+           A++L  
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +  +G LP+V  +++LI GLC   + + A+ +  +M+E  C P+  TYS LI+      
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSER 456

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L  A  +   M  +GC+ NVV Y  ++  LC+NN    A  + ++M       ++VT+N
Sbjct: 457 RLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYN 516

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I GLC   RV+ A +L+DQM      P+  TY  +L    +   +K A ++V  +   
Sbjct: 517 TLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLN 576

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G + +IVTY T++ G+C+AG V  A +LL  + ++G  L    +N +I A CK+ +   A
Sbjct: 577 GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEA 636

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++L   +   G+  PD+I+Y  +  G+CN GG +QEA  +  +ML +GI P F ++  L 
Sbjct: 637 MRLFREMMEKGD-PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLA 695

Query: 559 RSLFS 563
             L S
Sbjct: 696 EGLCS 700



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 245/509 (48%), Gaps = 14/509 (2%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E+ +++G   + + M   G   +      ++N   + G  E+AL+  Y   E G  P   
Sbjct: 246 EEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQV 303

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +N +++ L           +   M   G E +V+TYN L+  LCK   +D A ++L  M
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHM 363

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKI 181
            ++ C P+ V+Y T++ ++CK   VE A ELA    S      V  +N+LI GLC     
Sbjct: 364 VSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNR 423

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E A  L  EM ++G DP+  TYS +I SLC    ++ +L +L +M + GC  N+  + +L
Sbjct: 424 EIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTL 483

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G     R  +A D++++M   G   + V Y+TLI+GLC +  ++EA  +  QM     
Sbjct: 484 IDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGL 543

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  TY+ ++  F + G++  A+ I   M  NGC P++V Y  ++  LC+      A  
Sbjct: 544 KPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASK 603

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+  +  +        +N  I+ LC   R   AM+L  +M +    P++ TY  +  GL 
Sbjct: 604 LLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663

Query: 422 RVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                ++EA +   E+ + GI     ++  +  G+C   M     QL+  ++ +G    +
Sbjct: 664 NGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQS 723

Query: 481 ITFNIIIYAYCKQGKVNNAI----QLLDR 505
            T   II  + K  K N+A+     +LDR
Sbjct: 724 ET--SIIRGFLKIQKFNDALANLGAILDR 750



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 176/358 (49%), Gaps = 9/358 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLGE   ID    +L  M       +   + ++I +  +    E A ++   +   G+ P
Sbjct: 349 KLGE---IDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLP 405

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  +N ++  L   +   +   ++  MK  G +P+ FTY+IL+++LC   R+  A  LL
Sbjct: 406 DVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLL 465

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKE 178
            EM   GCA + V Y T++  +CK  +V +A ++  +    GVS     YN LINGLCK 
Sbjct: 466 KEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKS 525

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            ++EEA  L+ +M+  G+ P+  TY+T++   C  G+++ +  I+  M + GC P+I ++
Sbjct: 526 KRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTY 585

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G    GR   AS L   +  +G +    AY+ +I  LC      EA+ +  +M E
Sbjct: 586 GTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMME 645

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLG-ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
              PP+V TY  +  G    G  +  A      M+  G  P   ++  + + LC  +M
Sbjct: 646 KGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSM 703


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 181/576 (31%), Positives = 306/576 (53%), Gaps = 10/576 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  + +  Q L +++K    +     +  +INS  R G  E AL++   ++  G
Sbjct: 15  LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP +  YN ++D L    +F     + + M+ +G  P+V TYN L+  L K  R+  A+
Sbjct: 75  CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
            L  EM  +GC PD  +Y +++  + K+G+ ++A EL     R G    V  Y++LI GL
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K+ +  +AF L  EM  RG  P+ IT++ ++ +L   G V+ +L +L +M  RG  P +
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G+   G   EA +L + M R G  P+VV YS LI GL     +DEA  V  +
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME+  CPP+  TY+ LI+G  KAG L  A ++++RM S GC+P+VV Y+ ++  L +   
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L E+M      P+  T+ + I  L   G+VD A +L  +M+     P++ TYN 
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            L+ L R  R KEA ++  ++++ G+  ++ TY+ +L G+ +   V +A  LL +++ +G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D++ F+  +      G V+ A +LL      G W P   SY +L+  +  +G + EA
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW-PGASSYNALIDALAKAGRVSEA 553

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           F  L+ +  +G  P+  +++    SL S LG  G +
Sbjct: 554 FNTLEDLKEQGGKPDIVSYS----SLISALGQTGQI 585



 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 277/489 (56%), Gaps = 6/489 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  YN +L+AL    +      ++  +K     P+V +Y+ L+ +L +  + + A ++
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCK 177
           + EM  KGC P+  +Y T+V  + K GQ +EA R LA    +G    V  YN LI+ L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             ++ EAF L  EM +RG  P+  TY+++I  L  VG  + ++ +L +M   GC P++ +
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           ++SL+ G    G T +A  L+  M R G  P+ + ++ L+  L   G +D+A+ +  +M+
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    P V TY+ALI GF K G+L+ A  + + M  NGC P+VV Y+C++  L + +   
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  +++KM  E CPP+T+T+NT I GL   G ++ A +L D+MK   C P++ TY+ L+
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             L +  RV+ A  L  E+E  GIQ ++ TY +I+  + +AG V +A +L  +M  +G  
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLS 426

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D IT+N  + +  + G+   A ++ + ++  G   PD+ +Y +LL G+  +  + +A  
Sbjct: 427 PDVITYNAFLNSLGRGGRFKEARKIFEDMKESG-LLPDVATYDALLLGLSKTKEVDDACG 485

Query: 538 YLQKMLNEG 546
            L++++ +G
Sbjct: 486 LLKELIEQG 494



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 242/435 (55%), Gaps = 6/435 (1%)

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFW 186
           +P+ V+Y ++++++ K GQ EEA+ L     A ++   V  Y+ LIN L +  K E A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           ++ EM  +G  PN+ TY+T++  L   G  + +L +L +M   GC P++ ++  L+    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  EA  L+  M   G +P+   Y++LI+GL   G   +A+ +  +ME + CPP+V 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TYS+LI G  K G  + A +++  M   G  P+ + +T ++  L +      A  L+++M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 P  VT+N  I G    G +  A  LLD+MK+  C P++ TY+ L+ GL++ +++
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA +++ ++EK G   + +TYNT+++G+ +AG++ +A +L  +M  +G   D +T++ +
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I A  K  +V +A  L + +   G   PD+ +Y S++  +  +G + +A     +M  +G
Sbjct: 366 ITALGKAARVESACVLFEEMESVG-IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424

Query: 547 ICPNFATWNVLVRSL 561
           + P+  T+N  + SL
Sbjct: 425 LSPDVITYNAFLNSL 439



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 270/536 (50%), Gaps = 13/536 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ LG+  + D    LL +M+  G       +  +I++  + G   +A  +F  +RE G
Sbjct: 85  LVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERG 144

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++  L    R      +   M+R G  P+V TY+ L+  L K+     A+
Sbjct: 145 CVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAF 204

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  EM  +G  PD++++T ++ ++ K G+V++A EL           GV  YNALI G 
Sbjct: 205 KLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGF 264

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   + EA+ LL EM   G  P+V+TYS +I+ L     ++ +  +L +M   GC P+ 
Sbjct: 265 GKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDT 324

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G    G  ++A  L++RM  +G  P+VV YSTLI  L     ++ A  +  +
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME     P++ TY ++I    KAG +  A ++++ M   G SP+V+ Y   +  L +   
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A  + E M      P+  T++  + GL     VD A  LL ++ +  C  +   ++E
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            L+ L     V EA EL+      G+     +YN ++  + +AG V EAF  L  +  +G
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLL-----WG 525
            K D ++++ +I A  + G+++ A +LL+ + + G + +P   SY++L+     WG
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPR--SYSNLVRKLQDWG 618



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 191/350 (54%), Gaps = 2/350 (0%)

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +PN+ ++ SLL      G+  EA  L+  +    + P+VV+YS LI+ L   G  + A+ 
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           V  +M+   C PN+ TY+ L+D   KAG    A ++   M  NGC P+V  Y C++  L 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A +L  +M    C P+T T+N+ I GL   GR   AM+LL++M+++ C P++ 
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY+ L+ GL +     +AF+L  E+++ G + + +T+  ++  + +AG V +A +LL +M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
              G K   +T+N +I  + K G +  A  LLD ++  G   PD+++Y+ L+ G+  +  
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG-CKPDVVTYSCLITGLIKASQ 304

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + EA   L+KM  EG  P+  T+N L+  L    G L     L D M +K
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGL-GKAGLLNDAGRLFDRMKSK 353


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  303 bits (775), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/498 (32%), Positives = 288/498 (57%), Gaps = 17/498 (3%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN-KGCAPDAVSYTTIVSSICKLGQV 151
           R+ + PN  TYN+++  LCK      AY++L EM + K  APD V+Y+T+++  CK G++
Sbjct: 2   REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61

Query: 152 EEA----RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           + A    RE+  R G    V  Y ++++GLC++ K++ A  ++ EM  +G++P+  T+S 
Sbjct: 62  DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM-IRE 264
           +I+  C+   V+ +L +  ++    C  +  S ++L+ G     R  EA +L+  M +RE
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 265 --GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
              + P+VV Y+ LI G C +G++++A+ +   ME   C PNV TYS+L+ G  KAG+L 
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  ++ RM S GC PNVV YT ++  LC  +    A  L+++M    CP +TV++N  +
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALL 301

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGI 441
            G C  GR++ A +L  +M    CLP+  TY  L+ G    +R++EA  L+  ++   GI
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 361

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++VTY+ ++ G  RA   VEA + + +M+      +A+T++ +I   CK G+VN+A++
Sbjct: 362 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAME 421

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +       PD+++YT ++ G+C +   +EA   L++M+N+ + P+  T+N ++ +L
Sbjct: 422 VLKNVD-----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476

Query: 562 FSNLGHLGPVYILDDIMA 579
              LG +   + L   MA
Sbjct: 477 -CRLGDMDEAWKLLVAMA 493



 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 171/555 (30%), Positives = 292/555 (52%), Gaps = 21/555 (3%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYNHILDALLAENRFS 82
           E V+ +E  +  V+N   +  L  +A ++   +R+   + P +  Y+ +++    +    
Sbjct: 3   EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62

Query: 83  MINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
               I   M  RDGM P+V TY  ++  LC++ ++D A +++ EM  KG  PD  +++ +
Sbjct: 63  RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122

Query: 142 VSSICKLGQVEEAREL-------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV-- 192
           ++  C   +V+EA +L       + R  +  S  +ALI GLC+E +I EA+ L  EM   
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSS--SALITGLCRERRIGEAYELFQEMEMR 180

Query: 193 -DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            D    P+V+TY+ +I   C  GN+E ++ +LG M  R C PN+ +++SLL G    G  
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A DL+ RM  +G +PNVV Y+TLIHGLC+   +D A  +  +M    CP +  +Y+AL
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFEN 370
           +DG+ + G +  A Q++  M +  C P+ + YTC+V+  C  +   +A  L+E M     
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT++  + G     R   A + + +M      PN  TY+ L+DGL +  RV  A 
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           E++  ++K     ++VTY  ++ G+C      EA  LL +M+ +  +    TFN +I A 
Sbjct: 421 EVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGAL 476

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C+ G ++ A +LL  +   G   P +++YT+LL G   +G M+ A+   + M  +    +
Sbjct: 477 CRLGDMDEAWKLLVAMAAHG-LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSS 535

Query: 551 FATWNVLVRSLFSNL 565
            A  N++    FS L
Sbjct: 536 SAA-NLVPEQAFSAL 549



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 269/556 (48%), Gaps = 57/556 (10%)

Query: 32  VFISVINSYRRVGLAEQALKMFYR-IREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
            + +VIN + + G  ++A ++    +   G+ P V  Y  ++D L  + +      +   
Sbjct: 47  TYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVRE 106

Query: 91  MKRDGMEPNVFTYNILLKA-----------------------------------LCKNNR 115
           MK  G+EP+ FT++ L+                                     LC+  R
Sbjct: 107 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERR 166

Query: 116 VDGAYKLLVEMGNK---GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSV 167
           +  AY+L  EM  +      PD V+YT ++   CK G +E+A ++       +    V  
Sbjct: 167 IGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT 226

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y++L++GLCK   +++A  L   M  +G  PNV+TY+T+I  LC    V+ +  ++ +M 
Sbjct: 227 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 286

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
              C  +  S+ +LL GY   GR  EA  L+  M  +  LP+ + Y+ L+ G C+   ++
Sbjct: 287 ATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLE 346

Query: 288 EAVSVSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           EA  +   M+  +   P+V TYS ++ G+++A   + A++    MI+   +PN V Y+ +
Sbjct: 347 EARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSL 406

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+    + A  +++ +      P+ VT+   I+GLCG  R + A+ LL++M     
Sbjct: 407 IDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV 462

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P++ T+N ++  L R+  + EA++L+  +   G++  +VTY T+L G  R G +  A++
Sbjct: 463 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 522

Query: 467 LLGKMLIEGTKLDAI-------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
           L   M  +  K  +         F+ +I   CK  +++ A+ +++ +R   E  P     
Sbjct: 523 LFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELR-SRECEPAEEDC 581

Query: 520 TSLLWGICNSGGMQEA 535
            +++ G+  +G  +EA
Sbjct: 582 LAIVDGLLRAGRTEEA 597



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 255/517 (49%), Gaps = 20/517 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    ++++MK++GV   +  F ++I  +      ++ALK++  I     +      +
Sbjct: 96  KMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSS 155

Query: 70  HILDALLAENRFSMINPIYS--NMKRDGM-EPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            ++  L  E R      ++    M+ DG  +P+V TY  L+   CK+  ++ A K+L  M
Sbjct: 156 ALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM 215

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKI 181
             + C P+ V+Y++++  +CK G +++A +L  R  S      V  Y  LI+GLC  HK+
Sbjct: 216 EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 275

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  L+ EM       + ++Y+ ++   C +G +E +  +  +M  + C P+  ++T L
Sbjct: 276 DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCL 335

Query: 242 LKGYLLGGRTHEASDLWNRM-IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++G+    R  EA  L   M    G  P+VV YS ++ G        EA     +M   +
Sbjct: 336 VRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN 395

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN  TYS+LIDG  KAG +  A ++    + N   P+VV YT +++ LC  +   +A 
Sbjct: 396 VAPNAVTYSSLIDGLCKAGRVNHAMEV----LKNVDKPDVVTYTIVIEGLCGTDRTEEAL 451

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L+E+M  +   P+  TFN+ I  LC  G +D A KLL  M  +   P + TY  LL+G 
Sbjct: 452 TLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 511

Query: 421 LRVNRVKEAFELVT----EIEKCGIQLNIV---TYNTILHGVCRAGMVVEAFQLLGKMLI 473
            R  R++ A+EL      + +K     N+V    ++ ++ G+C+A  + +A  ++ ++  
Sbjct: 512 SRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 571

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
              +        I+    + G+   A +L++ I   G
Sbjct: 572 RECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 208/424 (49%), Gaps = 19/424 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+ + + G  E+A+KM   +      P V  Y+ +L  L           ++  M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G  PNV TY  L+  LC  ++VD A  L+ EM    C  D VSY  ++   C+LG++
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310

Query: 152 EEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYST 205
           EEA++L     +   +     Y  L+ G C   ++EEA +LL  M    GIDP+V+TYS 
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 370

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +++          +   + +M  R   PN  +++SL+ G    GR + A ++   + +  
Sbjct: 371 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK-- 428

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV Y+ +I GLC     +EA+++  +M      P+V T++++I    + G++  A 
Sbjct: 429 --PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAW 486

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM--------AFENCPPNTVT 377
           ++   M ++G  P +V YT +++   +      A+ L E M        +  N  P    
Sbjct: 487 KLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQA- 545

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           F+  I+GLC    +D AM ++++++  EC P       ++DGLLR  R +EA +L+  I 
Sbjct: 546 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605

Query: 438 KCGI 441
           K G+
Sbjct: 606 KVGL 609



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 177/328 (53%), Gaps = 13/328 (3%)

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAGN 320
           +RE   PN   Y+ +++GLC      +A  V  +M +  S  P++ TYS +I+GF K G 
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 321 LLGASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +  A +I   M++ +G +P+VV YT +V  LC++    +A  ++ +M  +   P+  TF+
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--- 436
             I G C   +VD A+KL  ++    C  +  + + L+ GL R  R+ EA+EL  E+   
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL--DAITFNIIIYAYCKQG 494
           E    + ++VTY  ++ G C++G + +A ++LG M  EG K   + +T++ +++  CK G
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM--EGRKCVPNVVTYSSLLHGLCKAG 238

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP-NFAT 553
            ++ A+ L  R+   G   P++++YT+L+ G+C +  +  A + + +M     CP +  +
Sbjct: 239 DLDQALDLFRRMTSKG-CVPNVVTYTTLIHGLCAAHKVDAARLLMDEM-TATCCPADTVS 296

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +N L+   +  LG +     L   MA K
Sbjct: 297 YNALLDG-YCRLGRIEEAKQLFKEMAAK 323


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 167/538 (31%), Positives = 290/538 (53%), Gaps = 16/538 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGV---SCSEGVFISVINSYRRVGLAEQALKMFYRIR 57
           MI+ L +  ++D    L +QM  + +     + G  I  +   RRV   ++A  +F   R
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRV---KEAYDLFEEAR 57

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK-RDGMEPNVFTYNILLKALCKNNRV 116
             G  PTV  YN ++D L    R      +Y +M    G  P V TY+ L+  LC+++ V
Sbjct: 58  AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEV 117

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNAL 171
           D   KLL EM  +GCAP+AV+Y T+V+++   G+ +EA  L  +  +      +  +  +
Sbjct: 118 DKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLI 177

Query: 172 INGLCKEHKIEEAFWLLCEM--VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           I GLCKE +IE AF ++ EM  ++ G+ P+VIT+++++  LC    +  +  +  +   R
Sbjct: 178 IKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           GC PN+ ++++L+ G     +  EA  L  +M+  G   N V YST++ GL   G M++A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           V V  QM +  C P+  TY+ LIDGF K   L  A  +   M+  G  P+VV YT +   
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL-P 408
           LC++  F +A  +++ MA   C PN +T+++ + GLC  GRV  A+   ++M + E + P
Sbjct: 358 LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 417

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++  Y+ L+DGL +  ++ EA+E +  + + G   ++VT++ +++G+C AG +    +L 
Sbjct: 418 HVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 477

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
             M   G   D +T+  ++   C+  +V+ A  L  ++R  G  +PD  +  +++ G+
Sbjct: 478 RGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG-LSPDRSTRRTMIHGL 534



 Score =  302 bits (773), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 283/530 (53%), Gaps = 18/530 (3%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+ +F ++ +  + P V  Y  ++D L  + R      ++   +  G  P V TYN +
Sbjct: 12  DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71

Query: 107 LKALCKNNRVDGAYKLLVEMG-NKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRF 161
           +  LCK  R++ A  L  +M  + G  P  V+Y+T++  +C+  +V++      E+A R 
Sbjct: 72  IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRG 131

Query: 162 GSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
            +  +V YN L+N L  + + +EAF LL +M   G  P +IT+  II  LC  G +E + 
Sbjct: 132 CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAF 191

Query: 221 GILGQMFV--RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
            ++ +MF+   G +P++ +F S+L G     R  +A +++ R +  G  PNVV YSTLI 
Sbjct: 192 RVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLID 251

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GL     MDEA+ +  +M E  C  N  TYS ++DG  K G +  A  +  +M   GC P
Sbjct: 252 GLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP 311

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           + V Y  ++    +     +A  L+ +M      P+ VT+ T   GLC  GR D A+++L
Sbjct: 312 DAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 371

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEA---FELVTEIEKCGIQLNIVTYNTILHGV 455
           D M    C PN  TY+ ++DGL +  RV EA   FE +   E   +  +++ Y+ ++ G+
Sbjct: 372 DYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV--VAPHVIAYSALIDGL 429

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN-- 513
           C+AG + EA++ L +M+  G   D +TF+I+I   C  G+++  ++L    RG  E    
Sbjct: 430 CKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF---RGMAERGCV 486

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           PD+++Y +L+  +C +  + EAF   Q+M ++G+ P+ +T   ++  L  
Sbjct: 487 PDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLE 536



 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 158/464 (34%), Positives = 261/464 (56%), Gaps = 8/464 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMR 160
           ++  LCK+ +VD A  L  +M +K   PD V+Y  ++  + K  +V+EA +L     A  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYSTIISSLCDVGNVETS 219
               V  YN +I+GLCK  +IE A  L  +M +  G  P V+TYST+I  LC    V+  
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +L +M  RGC PN  ++ +L+   L  GR+ EA  L  +M   G  P ++ +  +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 280 LCSNGSMDEAVSVSYQME--ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           LC  G ++ A  V  +M   E+   P+V T+++++DG  K   +L A  ++ R +  GC 
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y+ ++  L +     +A  L+ KM    C  NTVT++T + GL   GR++ A+ +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L QM+   CLP+  TYN L+DG  +  R++EA  L+ E+ + G   ++VTY T+ HG+CR
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           +G   EA ++L  M   G   +AIT++ I+   CK G+V  A+   +++       P +I
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Y++L+ G+C +G + EA+ +L++M+  G  P+  T+++L+  L
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/515 (29%), Positives = 235/515 (45%), Gaps = 81/515 (15%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR-EF 59
           +I+ LG++  +     L ++ + +G   +   + ++I+   + G  E AL ++  +   F
Sbjct: 36  LIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHF 95

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +PTV  Y+ ++D L  ++       +   M   G  PN  TYN L+ AL    R   A
Sbjct: 96  GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVS----VYNAL 171
           + LL +M   GC P+ +++  I+  +CK G++E A     E+ M   SG+S     +N++
Sbjct: 156 FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFM-IESGLSPDVITFNSV 214

Query: 172 INGLCKEHKI-----------------------------------EEAFWLLCEMVDRGI 196
           ++GLCKE +I                                   +EA  LL +MV+ G 
Sbjct: 215 LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 274

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
             N +TYST++  L  VG +E ++ +L QM   GC P+  ++ +L+ G+    R  EA  
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 334

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS------- 309
           L   M+  GF P+VV Y+TL HGLC +G  DEAV +   M    C PN  TYS       
Sbjct: 335 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 394

Query: 310 -----------------------------ALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                                        ALIDG  KAG +  A +   RMI  G  P+V
Sbjct: 395 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDV 454

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V ++ ++  LC          L   MA   C P+ VT+ T +  LC   RVD A  L  Q
Sbjct: 455 VTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQ 514

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           M+     P+ +T   ++ GLL VNR ++A  +  E
Sbjct: 515 MRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 176/327 (53%), Gaps = 4/327 (1%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++ G     +  +A  L+ +M+ +   P+VV Y  LI GL     + EA  +  +     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRM-ISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           C P V TY+ +IDG  K G +  A  +++ M I  G  P VV Y+ ++  LC+++   + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L+E+MA   C PN VT+NT +  L G GR   A  LL+QM    C P + T+  ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 420 LLRVNRVKEAFELVTEIE--KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           L +   ++ AF +V E+   + G+  +++T+N++L G+C+   +++A  +  + L  G +
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T++ +I    K  K++ A+QLL ++   G    + ++Y++++ G+   G M++A +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG-CRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
            L++M + G  P+  T+N L+   F  
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKR 326



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 162/306 (52%), Gaps = 8/306 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D    LL +M   G   +   + +V++   +VG  E A+ +  ++R+ G
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++D      R      +   M   G  P+V TY  L   LC++ R D A 
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 368

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR--FGSGVSVYNALING 174
           ++L  M  +GCAP+A++Y++IV  +CK G+V EA     ++A        V  Y+ALI+G
Sbjct: 369 EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 428

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  KI+EA+  L  M+  G  P+V+T+S +I+ LCD G ++T L +   M  RGC P+
Sbjct: 429 LCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPD 488

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +L+       R  EA DL+ +M  +G  P+     T+IHGL      ++A  +  
Sbjct: 489 MVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI-- 546

Query: 295 QMEENS 300
           Q EENS
Sbjct: 547 QDEENS 552



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 84/165 (50%)

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++DGL +  +V +A  L  ++    I  ++VTY  ++ G+ +   V EA+ L  +   +G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
                +T+N +I   CK G++ NA+ L D +     + P +++Y++L+ G+C    + + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              L++M   G  PN  T+N LV +L           +L+ + AN
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAAN 165


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 174/548 (31%), Positives = 297/548 (54%), Gaps = 13/548 (2%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF---GLKPTVKIYNHILDALLAENRF 81
           G S +  +   V+NS +   LA      F+R       G   T   +N +L  L+   + 
Sbjct: 38  GASTTPRIVGRVVNSLKDAKLA----LAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKH 93

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
                ++ +      EP+V +YNI++   C    +  A +LL EM + G APDA ++T I
Sbjct: 94  REAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPI 153

Query: 142 VSSICKLGQVEEARELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           ++++   G ++ A +     G    V  Y ALI    +  K+EEA  LL EM +RG  PN
Sbjct: 154 ITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPN 213

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           ++TY+ ++ +LC +  V  +  ++ +M   G  PN+ +F SL+ G+   G   +A  L  
Sbjct: 214 LVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLG 273

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M+ +G  PNVV YS LI GLC +    EA  V  +M+     P+  TYSALI G  KA 
Sbjct: 274 IMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKAD 333

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A Q+  RM  +GC+P+VV Y+ ++   C++    +A   +++M  +   P+ VT+N
Sbjct: 334 KIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYN 393

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQY-ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           T I GLC  G++  A  +L+QM++  + LP++ TY+ +++GL + + + EA +L+  + K
Sbjct: 394 TVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCK 453

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G   ++VTY TI+ G+C+ G + EA  LL  M   G   + +T+  +I   CK  KV+ 
Sbjct: 454 AGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDE 513

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN-EGIC-PNFATWNV 556
           A ++++ +R  G   P++++Y +++ G+C SG ++EA   +Q+M +    C P+ AT+  
Sbjct: 514 AERVMEEMRNAG-CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRT 572

Query: 557 LVRSLFSN 564
           +V +L S+
Sbjct: 573 IVNALMSS 580



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/463 (33%), Positives = 250/463 (53%), Gaps = 11/463 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++MK  G +        +I +    G  + A+     +R  G  P V  Y  ++ A  
Sbjct: 134 LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFA 190

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +   M+  G  PN+ TYN+L+ ALCK + V  A  ++ +M   G AP+ +
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ ++V   CK G V++AR+L     A      V  Y+ALI+GLCK  K  EA  +L EM
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEM 310

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+ P+  TYS +I  LC    +E +  +L +M   GC P++  ++S++  +   G+ 
Sbjct: 311 KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKL 370

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTYSA 310
            EA      M ++   P+VV Y+T+I GLC  G + EA  +  QM+E+    P+V TYS 
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYST 430

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I+G  K+  L+ A ++ +RM   GC+P+VV YT ++  LC+     +A  L++ M    
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C PN VT+ T I GLC   +VD A +++++M+   C PN+ TYN +++GL    R+KEA 
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550

Query: 431 ELVTEIE--KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +LV  ++  +     +  TY TI++ +  + +V EA QLL +M
Sbjct: 551 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 149/445 (33%), Positives = 243/445 (54%), Gaps = 11/445 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  +    ++DG    L+ M   G   +   + ++I ++ R    E+A+K+   +RE G
Sbjct: 153 IITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 209

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN ++DAL   +       +   M   G  PNV T+N L+   CK   VD A 
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDAR 269

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           KLL  M  KG  P+ V+Y+ ++  +CK  +  EA+E+     + GV+     Y+ALI+GL
Sbjct: 270 KLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGL 329

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  KIEEA  +L  M   G  P+V+ YS+II + C  G +  +   L +M  +  +P++
Sbjct: 330 CKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDV 389

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            ++ +++ G    G+  EA  +  +M   G  LP+VV YST+I+GLC +  + EA  +  
Sbjct: 390 VTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLD 449

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +  C P+V TY+ +IDG  K G L  A  +   M   GC+PNVV YT ++  LC+  
Sbjct: 450 RMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKAR 509

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK--QYECLPNITT 412
              +A  ++E+M    CPPN VT+NT + GLC  GR+  A +L+ +MK  + EC P+  T
Sbjct: 510 KVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAAT 569

Query: 413 YNELLDGLLRVNRVKEAFELVTEIE 437
           Y  +++ L+  + V+EA +L+ +++
Sbjct: 570 YRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 186/380 (48%), Gaps = 43/380 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +   Q ++++M   G + +   F S+++ + + G  + A K+   +   G
Sbjct: 220 LVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG 279

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++D L    +F     +   MK  G+ P+ FTY+ L+  LCK ++++ A 
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           ++L  M   GC PD V Y++I+ + CK G++ EA++        R    V  YN +I+GL
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGL 399

Query: 176 CKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           CK  KI EA  +L +M + G + P+V+TYST+I+ LC    +  +  +L +M   GCNP+
Sbjct: 400 CKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPD 459

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+++ G    GR  EA  L   M R G  PNVV Y+TLI GLC    +DEA  V  
Sbjct: 460 VVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVME 519

Query: 295 QMEENSCPPNV-------------------------------------TTYSALIDGFAK 317
           +M    CPPN+                                      TY  +++    
Sbjct: 520 EMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMS 579

Query: 318 AGNLLGASQIWNRMISNGCS 337
           +  +  A Q+  +M S   S
Sbjct: 580 SDLVQEAEQLLEQMKSTTSS 599



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 4/250 (1%)

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           W      G S    ++  +++VL +     +A  L       +C P+  ++N  I G C 
Sbjct: 65  WAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCN 124

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G +  A++LL++MK     P+  T+  ++  +     +  A +    +   G   N+VT
Sbjct: 125 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVT 181

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  ++    RA  + EA +LL +M   G   + +T+N+++ A CK   V  A  ++ ++ 
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            GG + P+++++ SL+ G C  G + +A   L  M+ +G+ PN  T++ L+  L  +   
Sbjct: 242 EGG-FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300

Query: 568 LGPVYILDDI 577
           L    +L+++
Sbjct: 301 LEAKEVLEEM 310


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  300 bits (768), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 281/523 (53%), Gaps = 8/523 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G    AL +F  +   G  P+V  Y+ +LDA   E+ +     +   M+  G EP++ TY
Sbjct: 265 GRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTY 324

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           N+L+ A+C    VD A  +L  + + GC PDAV+YT ++ S+C   + +E  EL     S
Sbjct: 325 NVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384

Query: 164 -----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                    +N ++  LC++  ++ A  ++  M + G   +++TYS+I+  LCDVG V+ 
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDD 444

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ +L ++   GC P+  ++T++LKG     +   A +L   M+     P+ V ++T++ 
Sbjct: 445 AVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVA 504

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            LC  G +D A+ V  QM EN C P++ TY+ +IDG      +  A ++ + + S GC P
Sbjct: 505 SLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKP 564

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++V +  ++K LC  + +  A  L+  M   NCPP+ +TFNT I  LC  G +  A++ L
Sbjct: 565 DIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETL 624

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M +  C+PN +TY+ ++D LL+  + + A EL++ +   G   +++TYNT++  + +A
Sbjct: 625 KIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTN-GTP-DLITYNTVISNLTKA 682

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + EA  LL  M+  G   D  T+  + Y  C++   + A+++L R++  G  +PD   
Sbjct: 683 GKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG-LSPDTTF 741

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y  +L G C       A      M++ G  P+ +T+ +L+ +L
Sbjct: 742 YNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 162/561 (28%), Positives = 296/561 (52%), Gaps = 45/561 (8%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLK--PTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           + S  + G  ++AL +F  +   G +  P V   N ++  L ++ R S    +++ +   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G    V TYN ++   C+  R++ A +L+  M      PD  ++  ++ ++C  G++ +A
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFP---PDTFTFNPLIRALCVRGRIPDA 270

Query: 155 REL---AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             +    +  G   SV  Y+ L++  CKE    +A  LL EM  +G +P+++TY+ +I++
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +C+ G+V+ +L IL  +   GC P+  ++T +LK      R  E  +L   M      P+
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            V ++T++  LC  G +D A+ V   M E+ C  ++ TYS+++DG    G +  A ++ +
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           R+ S GC P+ +AYT ++K LC    + +A  L+ +M   +CPP+ VTFNT +  LC  G
Sbjct: 451 RLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG 510

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            VD A+++++QM +  C P+I TYN ++DGL   + + +A EL+++++ CG + +IVT+N
Sbjct: 511 LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFN 570

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL------- 502
           T+L G+C      +A QL+  M+      D +TFN +I + C++G +  AI+        
Sbjct: 571 TLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630

Query: 503 -------------------------LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
                                    L+ + G     PD+I+Y +++  +  +G M+EA  
Sbjct: 631 GCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALD 690

Query: 538 YLQKMLNEGICPNFATWNVLV 558
            L+ M++ G+CP+  T+  L 
Sbjct: 691 LLRVMVSNGLCPDTTTYRSLA 711



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 240/492 (48%), Gaps = 7/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G       +  +IN+    G  ++AL +   +   G KP    Y  +L +L 
Sbjct: 308 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLC 367

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  + + M  +   P+  T+N ++ +LC+   VD A +++  M   GC  D V
Sbjct: 368 GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIV 427

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++I+  +C +G+V++A EL  R  S         Y  ++ GLC   + E A  L+ EM
Sbjct: 428 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +     P+ +T++T+++SLC  G V+ ++ ++ QM   GC+P+I ++  ++ G       
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCI 547

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L + +   G  P++V ++TL+ GLC     ++A  +   M  ++CPP+  T++ +
Sbjct: 548 DDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTV 607

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I    + G L  A +    M  NGC PN   Y+ +V  L +      A  L+  M   N 
Sbjct: 608 ITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT--NG 665

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ +T+NT I  L   G+++ A+ LL  M      P+ TTY  L  G+ R +    A  
Sbjct: 666 TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVR 725

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++  ++  G+  +   YN +L G CR      A      M+  G   D  T+ I++ A  
Sbjct: 726 MLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785

Query: 492 KQGKVNNAIQLL 503
             G ++ A +LL
Sbjct: 786 YGGLLDEAKRLL 797



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 205/433 (47%), Gaps = 7/433 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V+ LL +M     +  E  F +++ S  + GL ++A+++   + E G    +  Y+ ILD
Sbjct: 375 VEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILD 434

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    R      + S +K  G +P+   Y  +LK LC   + + A +L+ EM    C P
Sbjct: 435 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP 494

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLL 188
           D V++ T+V+S+C+ G V+ A  +  +         +  YN +I+GLC E  I++A  LL
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            ++   G  P+++T++T++  LC V   E +  ++  M    C P+  +F +++      
Sbjct: 555 SDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQK 614

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A +    M   G +PN   YS ++  L   G    A+ +   M   +  P++ TY
Sbjct: 615 GLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT--PDLITY 672

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + +I    KAG +  A  +   M+SNG  P+   Y  +   +C+ +   +A  ++ ++  
Sbjct: 673 NTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQD 732

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+T  +N  + G C   R D A+     M    C+P+ +TY  LL+ L     + E
Sbjct: 733 TGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDE 792

Query: 429 AFELVTEIEKCGI 441
           A  L+  +   G+
Sbjct: 793 AKRLLASLCSLGV 805



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 190/403 (47%), Gaps = 7/403 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++  +D    ++  M   G       + S+++    VG  + A+++  R++ +G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP    Y  +L  L +  ++     + + M      P+  T+N ++ +LC+   VD A 
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +++ +M   GC+PD V+Y  I+  +C    +++A EL     S      +  +N L+ GL
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + E+A  L+  M+     P+ +T++T+I+SLC  G +  ++  L  M   GC PN 
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++ ++   L  G+   A +L + M      P+++ Y+T+I  L   G M+EA+ +   
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGMT--NGTPDLITYNTVISNLTKAGKMEEALDLLRV 694

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N   P+ TTY +L  G  +      A ++  R+   G SP+   Y  ++   C++  
Sbjct: 695 MVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRR 754

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
              A      M    C P+  T+   ++ L   G +D A +LL
Sbjct: 755 TDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLL 797



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 164/325 (50%), Gaps = 9/325 (2%)

Query: 242 LKGYLLGGRTHEASDLWNRMIREGF--LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           L+  +  G   EA  L++ M   G    P VV  + LI  LCS+G + +A  V   +  +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPS 216

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +    V TY+ +++G+ +AG +  A ++ N M      P+   +  +++ LC       A
Sbjct: 217 A---TVVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDA 270

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            ++ + M    C P+ VT++  +   C       AM LLD+M+   C P+I TYN L++ 
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           +     V EA  +++ +   G + + VTY  +L  +C +    E  +LL +M       D
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TFN I+ + C+QG V+ AI+++D +   G    DI++Y+S+L G+C+ G + +A   L
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHG-CVADIVTYSSILDGLCDVGRVDDAVELL 449

Query: 540 QKMLNEGICPNFATWNVLVRSLFSN 564
            ++ + G  P+   +  +++ L S 
Sbjct: 450 SRLKSYGCKPDTIAYTTVLKGLCST 474



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 80/165 (48%), Gaps = 9/165 (5%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQ--LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           L  L++   + EA  L   +   G +    +V  N ++  +C  G V +A ++   +   
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G     +T+N ++  YC+ G++ +A +L++    G  + PD  ++  L+  +C  G + +
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLIN----GMPFPPDTFTFNPLIRALCVRGRIPD 269

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           A      ML+ G  P+  T+++L+ +     G+   + +LD++ A
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRA 314



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 61/130 (46%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  +++    LL+ M   G+      + S+     R    ++A++M  R+++ G
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN +L     + R  +    +++M   G  P+  TY ILL+AL     +D A 
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAK 794

Query: 121 KLLVEMGNKG 130
           +LL  + + G
Sbjct: 795 RLLASLCSLG 804


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 186/606 (30%), Positives = 312/606 (51%), Gaps = 59/606 (9%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L ++MK +G+      + S+I+ + R G  E+A  +F  + + G++  V   + +
Sbjct: 138 DEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSML 197

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D L  E +    N +   M + G   ++ TY+ L+K LC  +R+  A +L + M   GC
Sbjct: 198 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGC 257

Query: 132 APDAVSYTTIVSSICKLGQV---------------------------------------- 151
            PDA++Y T++  +C+ G +                                        
Sbjct: 258 RPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 317

Query: 152 -EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            +EAREL     A      V  Y  LI+G C   K E+A  L  EM+D GI P+V T S 
Sbjct: 318 EDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSV 377

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC  G V  +  +L  +  RGC P++ + T+L+KG  +  R  +A+ L+ +M + G
Sbjct: 378 LIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLG 437

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS------CPPNVTTYSALIDGFAKAG 319
            +PNVV  +TL+ GLC +G++  A+ +   M  ++      C PN  +YS +IDG  K G
Sbjct: 438 CMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCG 497

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A +++  M + G  P+V++YT ++   C++  +  A  L  +M      P+  TF+
Sbjct: 498 REDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFS 557

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I  LC  G+V  A +LL+ M Q  C+PN  TY  L+ GL   +R+ EA +L  +++K 
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKL 617

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE----GT--KLDAITFNIIIYAYCKQ 493
           G   ++VTY T++ G+C+ G +  A +L  KML +    GT  K D I+++III   CK 
Sbjct: 618 GCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKH 677

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G+ + A +L   ++  G   P++ISYTSL+ G C SG +++A     +M+++G+  N  T
Sbjct: 678 GREDEARELFKEMKALGVI-PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVT 736

Query: 554 WNVLVR 559
           ++V++ 
Sbjct: 737 YSVMIH 742



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 173/530 (32%), Positives = 284/530 (53%), Gaps = 20/530 (3%)

Query: 51  KMFYRIREFGLK--PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           +M     ++G+K  PT+  Y+ I+D L  + R      ++  MK  GM P+V +Y  L+ 
Sbjct: 105 EMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIH 164

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS-- 163
             C++ + + A  L  EM + G   D  + + ++  +CK G+V EA EL    ++ G   
Sbjct: 165 GFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 224

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            +  Y+ LI GLC +H+I EA  L   M   G  P+ I Y T++  LC  GN+ T+L + 
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284

Query: 224 GQM------FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +M      +   C P + S++ ++ G     R  EA +L+  M  +G +P+V++Y+TLI
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           HG C +G  ++A  +  +M +    P+VTT S LID   K G ++ A+++   +I  GC 
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+VV  T +VK LC  +   +A  L  KM    C PN VT  T +KGLC  G +  A++L
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 464

Query: 398 ----LDQMKQY--ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
               L     Y   C PN  +Y+ ++DGL +  R  EA EL  E++  G+  ++++Y ++
Sbjct: 465 HKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSL 524

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +HG CR+G   +A  L  +M+  G + D  TF+++I   CK+GKV  A +LL+ +   G 
Sbjct: 525 IHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG- 583

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             P+ ++YT+L+ G+C +  + EA     KM   G  P+  T+  L++ L
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 633



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/456 (33%), Positives = 256/456 (56%), Gaps = 17/456 (3%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KPT+  Y+ I+D L  + R      ++  MK  G+ P+V +Y  L+   C + + + A  
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLC 176
           L  EM + G  PD  + + ++  +CK G+V EA    E+ ++ G    V     L+ GLC
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR------G 230
            +H+I +A  L  +M   G  PNV+T +T++  LC  GN++ +L +   M          
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN  S++ ++ G    GR  EA +L+  M   G +P+V++Y++LIHG C +G   +A 
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  +M +    P+VTT+S LID   K G ++ A+++   MI  GC PN V YT +VK L
Sbjct: 539 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 598

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM----KLLDQMKQYEC 406
           C N+   +A  L  KM    C P+ VT+ T +KGLC  G +  A+    K+L    QY  
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 658

Query: 407 --LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P++ +Y+ ++DGL +  R  EA EL  E++  G+  N+++Y +++HG CR+G + +A
Sbjct: 659 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 718

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             L  +M+ +G +L+A+T++++I+ +CK+G+++ A+
Sbjct: 719 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 170/549 (30%), Positives = 293/549 (53%), Gaps = 24/549 (4%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+ + + G   +A ++   + + G    +  Y+ ++  L  ++R S    ++ +MK+ G
Sbjct: 16  LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK------GCAPDAVSYTTIVSSICKLG 149
             P+   Y  L+K LC+  +++ A  L  EM N        C P  VSY+ I+  +CK  
Sbjct: 76  CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135

Query: 150 QVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           + +EAREL     A      V  Y +LI+G C+  K E+A  L  EM+D GI  +V T S
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSS 195

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +I  LC  G V  +  +L  M  RGC  +I ++++L+KG  +  R  EA+ L+  M + 
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS------CPPNVTTYSALIDGFAKA 318
           G  P+ +AY TL+ GLC  G+++ A+ +  +M  ++      C P + +YS +IDG  K 
Sbjct: 256 GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                A +++  M + G  P+V++YT ++   C +  + +A  L  +M      P+  T 
Sbjct: 316 RREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           +  I  LC  G+V  A KLL+ + Q  C+P++ T   L+ GL   +R+ +A +L  +++K
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT------KLDAITFNIIIYAYCK 492
            G   N+VT  T++ G+C++G +  A +L   ML + +      K +AI+++III   CK
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 495

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            G+ + A +L   ++  G   PD+ISYTSL+ G C SG  ++A     +M++ G+ P+  
Sbjct: 496 CGREDEARELFKEMKALGVI-PDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554

Query: 553 TWNVLVRSL 561
           T++VL+  L
Sbjct: 555 TFSVLIDML 563



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 160/540 (29%), Positives = 280/540 (51%), Gaps = 24/540 (4%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME------PNVF 101
           +A ++F  +++ G +P    Y  ++  L    + ++   ++  M  D  +      P + 
Sbjct: 63  EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLV 122

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR-----E 156
           +Y+I++  LCK+ R D A +L  EM  +G  PD +SYT+++   C+ G+ E+A+      
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L +   S V+  + LI+ LCKE K+ EA  LL  M+ RG   +++TYST+I  LC    +
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI----REGFL--PNV 270
             +  +   M   GC P+  ++ +L+KG    G  + A  L   M+    R G    P +
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           ++YS +I GLC +   DEA  +  +M+     P+V +Y+ LI GF  +G    A  ++N 
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+  G  P+V   + ++ +LC+     +A+ L+E +    C P+ VT  T +KGLC   R
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHR 422

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL----VTEIEKCGI--QLN 444
           +  A +L  +M++  C+PN+ T   L+ GL +   +K A EL    +++    GI  + N
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            ++Y+ I+ G+C+ G   EA +L  +M   G   D I++  +I+ +C+ GK  +A  L +
Sbjct: 483 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 542

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G   PD+ +++ L+  +C  G + EA   L+ M+  G  PN  T+  LV+ L  N
Sbjct: 543 EMVDIG-VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMN 601



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 203/383 (53%), Gaps = 13/383 (3%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+  GI P+V T   +I   C  G V  +  +L  M  RGC  +I ++++L+KG  +  R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS------CPPN 304
             EA+ L+  M + G  P+ +AY TL+ GLC  G ++ A+ +  +M  ++      C P 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + +YS +IDG  K      A +++  M + G  P+V++YT ++   C++  + +A  L  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M       +  T +  I  LC  G+V  A +LL+ M Q  C+ +I TY+ L+ GL   +
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE------GTKL 478
           R+ EA  L   ++K G + + + Y T++ G+C+ G +  A QL  +ML +        K 
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             I+++III   CK  + + A +L   ++  G   PD+ISYT+L+ G C SG  ++A   
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQG-IMPDVISYTTLIHGFCLSGKWEKAKCL 359

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
             +ML+ GI P+  T +VL+  L
Sbjct: 360 FNEMLDVGIQPDVTTSSVLIDML 382



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD------GMEPNVF 101
           +A ++F ++++ G  P V  Y  ++  L           ++  M  D        +P+V 
Sbjct: 606 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 665

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +Y+I++  LCK+ R D A +L  EM   G  P+ +SYT+++   C+ G++E+A+ L    
Sbjct: 666 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 725

Query: 162 -GSGVSV----YNALINGLCKEHKIEEAFW 186
              GV +    Y+ +I+G CKE +I++A +
Sbjct: 726 VDQGVQLNAVTYSVMIHGFCKEGQIDKALF 755



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 17/84 (20%), Positives = 41/84 (48%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+   + G  ++A ++F  ++  G+ P V  Y  ++       +      +++ M   G
Sbjct: 670 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 729

Query: 96  MEPNVFTYNILLKALCKNNRVDGA 119
           ++ N  TY++++   CK  ++D A
Sbjct: 730 VQLNAVTYSVMIHGFCKEGQIDKA 753


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 188/642 (29%), Positives = 310/642 (48%), Gaps = 81/642 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++++L +   +  V  +++ ++ +   C E V ++VI +Y +  + +QAL +F R+ E F
Sbjct: 49  ILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIF 108

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P ++ YN +L+AL+  N++      +   +  G+ PN+ TYNIL+K  C+  + D A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA------------------------- 154
            +LL  M  +G +PD  SY T+++S+ K G + +A                         
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 155 ----------RELAMRFGSGVSVY------NALINGLCKEHKIEEAF--WLLCEMVDRGI 196
                      E+  R   G SVY      N +INGLCK  K +E+F  W   +  +RG 
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           D  + TYST+I  LC  GN++ +  +  +M   G +P++  + ++L GYL  GR  E  +
Sbjct: 289 D--LYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           LW  M +EG    VV+Y+ LI GL  N  +DEA+S+   + E  C  +  TY  L+ G  
Sbjct: 347 LWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G L  A  I     +     +  AY+ M+  LC+     +   ++++M    C PN  
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
             N  I G     +++ A++    M    C P + TYN L++GL +  R  EA+ LV E+
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
              G + N++TY+ +++G+C+   +  A  L  + L +G K D    NIII+  C  GKV
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585

Query: 497 NNAIQLLDRI--------------------------RGGGEWN--------PDIISYTSL 522
            +A+QL   +                          R    W+        PDIISY   
Sbjct: 586 EDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNIT 645

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           L G+C+   + +A  +L   ++ G+ P   TWN+LVR++  N
Sbjct: 646 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDN 687



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 229/531 (43%), Gaps = 75/531 (14%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K + D  + LL  M  +G S     + ++INS  + G    ALK+F  + E G+ P V 
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 67  IYNHILDALLAEN------------------------------------RFSMINPIYSN 90
            YN ++D    +                                     +F     I+  
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           MK++    +++TY+ L+  LC +  +DGA ++  EM   G +PD V Y T+++   + G+
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340

Query: 151 VEEAREL------------------------AMRFGSGVSV---------------YNAL 171
           +EE  EL                          +    +S+               Y  L
Sbjct: 341 IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GLCK   + +A  +L E  +   D +   YS++I+ LC  G ++   G+L QM   GC
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN H   +++ G++   +  +A   +  M+ +G  P VV Y+TLI+GL       EA +
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M      PN+ TYS L++G  +   L  A  +W + +  G  P+V  +  ++  LC
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
            +     A  L  +M    C PN VT NT ++G       + A K+ D + QY   P+I 
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDII 640

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +YN  L GL   +R+ +A   + +    G+    +T+N ++  V   G + 
Sbjct: 641 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGALT 691



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 30/286 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L  +  +D V  +L QM   G   +  V  +VIN + R    E AL+ F  +   G
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PTV  YN +++ L    RFS    +   M   G +PN+ TY++L+  LC+  ++D A 
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +   KG  PD   +  I+  +C  G                              K
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSG------------------------------K 584

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E+A  L  EM  R   PN++T++T++     V + E +  I   +   G  P+I S+  
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNI 644

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
            LKG     R  +A    N  +  G LP  + ++ L+  +  NG++
Sbjct: 645 TLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 175/561 (31%), Positives = 307/561 (54%), Gaps = 25/561 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY-SN 90
           +  + IN+ +RV L    LK F+ +R      +V  YN +L +L      +    I+   
Sbjct: 18  ITTATINT-QRVNLC--PLKFFF-VRSS--SRSVADYNIVLQSLCRAGETARALEIFRGE 71

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M RDG+ P + TYN ++  LCK+N +    +L  E+  +G  PD V+Y T++ S+CK G 
Sbjct: 72  MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131

Query: 151 VEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID--PNVITY 203
           +EEAR L     S      V  Y+ LINGLCK  +I+EA  L+ EM  +  D  PN+ITY
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191

Query: 204 STIISSLCDVGNVETSLGIL-----GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           ++ +  LC       +  ++     G + V   +P+  +F++L+ G    G+T EA +  
Sbjct: 192 NSFLDGLCKQSMTAEACELMRSLRDGSLRV---SPDTVTFSTLIDGLCKCGQTDEACN-- 246

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           + MI  G++PNVV Y+ L++GLC    M+ A ++   M +    P+V TYS L+D F KA
Sbjct: 247 DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 306

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
             +  A ++ + M S GC+PNVV +  ++  LC+++   +A  +  ++      P+ VTF
Sbjct: 307 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTF 366

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G C  G  + A  L ++M      P++ T+  L+DGL +  +V+ A +++  +  
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  N+VTYN ++HG+C++G + E  + L +M+  G   +++T+  ++YA C+  + ++
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+QL+ +++  G W+PD ++Y  L+ G+  SG  ++A   L++M+ +G  P+  T+    
Sbjct: 487 ALQLVSKLKSFG-WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 545

Query: 559 RSLFSNLGHLGPVYILDDIMA 579
             L  +    G + +L  ++A
Sbjct: 546 GGLHRSGNLAGTMELLRVVLA 566



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 256/510 (50%), Gaps = 42/510 (8%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           +M  +GV+ +   + ++IN   +       +++F  + + G  P V  YN ++D+L    
Sbjct: 71  EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAG 130

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC-------- 131
                  ++  M   G  PNV TY++L+  LCK  R+D A +L+ EM  K C        
Sbjct: 131 DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 190

Query: 132 -------------------------------APDAVSYTTIVSSICKLGQVEEARELAMR 160
                                          +PD V+++T++  +CK GQ +EA    M 
Sbjct: 191 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMI 250

Query: 161 FG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            G     V  YNAL+NGLCK  K+E A  ++  MVD+G+ P+VITYS ++ + C    V+
Sbjct: 251 AGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 310

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +L  M  RGC PN+ +F S++ G     R+ EA  +  ++     +P+ V ++ LI
Sbjct: 311 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILI 370

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            G C  G+ ++A ++  +M   +  P+V T+ ALIDG  KAG +  A  I + M + G  
Sbjct: 371 AGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 430

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  +V  LC++    +    +E+M    C P ++T+ + +  LC   R D A++L
Sbjct: 431 PNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQL 490

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           + ++K +   P+  TYN L+DGL +  + ++A  ++ E+   G Q +  T+     G+ R
Sbjct: 491 VSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHR 550

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +G +    +LL  +L +G   DA T + I+
Sbjct: 551 SGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 266/531 (50%), Gaps = 44/531 (8%)

Query: 36  VINSYRRVGLAEQALKMFY-RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           V+ S  R G   +AL++F   +   G+ PT+  YN I++ L   N       ++  + + 
Sbjct: 51  VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKR 110

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+V TYN L+ +LCK   ++ A +L   M ++GC P+ V+Y+ +++ +CK+G+++EA
Sbjct: 111 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEA 170

Query: 155 RELAMRFG-------SGVSVYNALINGLCKEHKIEEAFWL-------------------- 187
           REL              +  YN+ ++GLCK+    EA  L                    
Sbjct: 171 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 230

Query: 188 ----LC-----------EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
               LC           +M+  G  PNV+TY+ +++ LC    +E +  ++  M  +G  
Sbjct: 231 LIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVT 290

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ +++ L+  +    R  EA +L + M   G  PNVV ++++I GLC +    EA  +
Sbjct: 291 PDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQI 350

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
           + Q+      P+  T++ LI G  KAGN   AS ++  M++    P+V+ +  ++  LC+
Sbjct: 351 ALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCK 410

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A  +++ M     PPN VT+N  + GLC  GR++   + L++M    C+P   T
Sbjct: 411 AGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMT 470

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  L+  L R +R  +A +LV++++  G   + VTYN ++ G+ ++G   +A  +L +M+
Sbjct: 471 YGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 530

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
            +G + D+ TF        + G +   ++LL  +   G   PD  + +S+L
Sbjct: 531 GKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGML-PDATTCSSIL 580



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 213/420 (50%), Gaps = 15/420 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYR----RVGLAEQALKMFYRIREFGLK--P 63
            ID  + L+Q+M  +  SC     I   NS+     +  +  +A ++   +R+  L+  P
Sbjct: 166 RIDEARELIQEMTRK--SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               ++ ++D L    +         +M   G  PNV TYN L+  LCK ++++ A+ ++
Sbjct: 224 DTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKE 178
             M +KG  PD ++Y+ +V + CK  +V+EA EL     S      V  +N++I+GLCK 
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +  EAF +  ++ +R + P+ +T++ +I+  C  GN E +  +  +M  +   P++ +F
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G    G+   A D+ + M   G  PNVV Y+ L+HGLC +G ++E      +M  
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVS 461

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           + C P   TY +L+    +A     A Q+ +++ S G  P+ V Y  +V  L ++    Q
Sbjct: 462 SGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQ 521

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A +++E+M  +   P++ TF     GL   G +   M+LL  +     LP+ TT + +LD
Sbjct: 522 AITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 174/588 (29%), Positives = 306/588 (52%), Gaps = 15/588 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  + D    +L +M   GV+     F S+++   + G  E+A  +   + E  
Sbjct: 16  LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P+   YN ++  L  +        +       G  P+V TY+IL   LCK  R+D A+
Sbjct: 76  CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +L+ EM   GC P+ V+Y T++  +CK  + E+A EL     +  F   V  Y  +++GL
Sbjct: 136 ELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGL 195

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++++A  ++  M+ RG  P+VITY+ ++  LC  G V+ +  I  +M  + C  + 
Sbjct: 196 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 255

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ GY    RT EA  + +  IR    P +  Y+ L+ G C  G +DE  +V   
Sbjct: 256 LAYVSLVNGYCKSSRTKEAQKVVDG-IRG--TPYIDVYNALMDGYCKEGRLDEIPNVFED 312

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PN+ TY+ ++DG  K G +  A      M S GC P+VV+Y  ++  L + + 
Sbjct: 313 MACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK 372

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  ++++M     PP+ VT+NT +   C   R D A+ +L  M +    P+  TYN 
Sbjct: 373 PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 432

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNI-VTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           L+ GL + NR+ +A+EL+ E+ + G  ++   TYNTI+  +C+ G + +A  L+  M   
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G + + +T+NI I   CK+G+++ A  LL  +    +   D +SYT+++ G+C +  +  
Sbjct: 493 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEM----DTLRDEVSYTTVIIGLCKAEQLDR 548

Query: 535 AFIYLQKMLN-EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           A    ++M+  +G+C    T+N+L+ + F+    L     L ++M  +
Sbjct: 549 ASKLAREMVAVKGLCITSHTFNLLIDA-FTKTKRLDEALTLLELMVQR 595



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 264/508 (51%), Gaps = 37/508 (7%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M    + P+VFTYNIL+  LCK ++ D A ++L EM ++G  PD V++ +I+  +CK G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 151 VEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            E A  L               YN LI+GLCK+  ++ A  L+ E V  G  P+V+TYS 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +   LC  G ++ +  ++ +M   GC PN+ ++ +L+ G     +T +A +L   ++  G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           F+P+VV Y+ ++ GLC  G +D+A+ +   M +  C P+V TY+AL++G  + G +  A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI---------------------- 363
            I+  M+S  C+ + +AY  +V   C+++   +A  ++                      
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 364 ----------EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                     E MA   C PN  T+N  + GLC  G+VD A   L+ M    C+P++ +Y
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N ++DGL + ++ KEA +++ ++ + GI  + VTYNT++   C+     +A  +L  M+ 
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G   D +T+N +I    +  ++ +A +L+  +   G       +Y +++  +C  G ++
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +A + +  M   G+  N  T+N+ +  L
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFIDRL 508



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/546 (29%), Positives = 278/546 (50%), Gaps = 8/546 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           + + L ++  ID    L+++M   G + +   + ++I+   +    E+A ++   +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  I+D L  E R      +   M + G  P+V TY  L++ LC+  RVD A+
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
            +  EM +K C  DA++Y ++V+  CK  + +EA+++   +R    + VYNAL++G CKE
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +++E   +  +M  RG  PN+ TY+ ++  LC  G V+ +   L  M   GC P++ S+
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++ G     +  EA  + ++MI+ G  P+ V Y+TL+   C     D+AV +   M +
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV-VAYTCMVKVLCQNNMFH 357
               P+  TY+ LI G ++   L  A ++ + M+ NGC  +    Y  ++  LC+     
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           QA  L++ M       NTVT+N FI  LC  GR+D A  LL +M   + L +  +Y  ++
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVI 537

Query: 418 DGLLRVNRVKEAFELVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
            GL +  ++  A +L  E+    G+ +   T+N ++    +   + EA  LL  M+  G 
Sbjct: 538 IGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGC 597

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
               IT+N++I   CK  KV+ A +L D +   G      +SYT L++G+C  G  +EA 
Sbjct: 598 SPSVITYNMVITCLCKLDKVDKAWELFDEMAVRG-IVASSVSYTVLIYGLCGQGRGKEAL 656

Query: 537 IYLQKM 542
             L++M
Sbjct: 657 QVLEEM 662



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 198/372 (53%), Gaps = 4/372 (1%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M +R + P+V TY+ +I  LC     + +  +L +M  RG  P+  +F S++ G    G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A  L   M      P+   Y+TLI GLC   ++D A ++  +   +   P+V TYS 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L DG  K G +  A ++   M  NGC+PN+V Y  ++  LC+ +   +A+ L+E +    
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+   + GLC  GR+D A+K+++ M +  C P++ TY  L++GL R  RV EA 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            +  E+       + + Y ++++G C++    EA +++    I GT    + +N ++  Y
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG--IRGTPYIDV-YNALMDGY 297

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK+G+++    + + +   G   P+I +Y  ++ G+C  G + EAF +L+ M + G  P+
Sbjct: 298 CKEGRLDEIPNVFEDMACRG-CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 551 FATWNVLVRSLF 562
             ++N+++  LF
Sbjct: 357 VVSYNIIIDGLF 368


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 181/609 (29%), Positives = 300/609 (49%), Gaps = 60/609 (9%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L ++MK +G+      + S+I+ +   G  E+A  +F  + + G++P V     +
Sbjct: 182 DEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVL 241

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D    E +    N +   M   G   ++ TY+ L+K LC  +R+  A +L + M   GC
Sbjct: 242 IDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 301

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS------------------------- 166
            PDA++Y T++  +C+ G++  A  L     +  S                         
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEG 361

Query: 167 ----------------------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
                                  Y+ LI GLC EH+I EA WL   M   G  P+ ITY 
Sbjct: 362 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 421

Query: 205 TIISSLCDVGNVETSLGILGQM------FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           T++  LC  GN+  +L +  +M      +   C P + S++ ++ G     R  EA +L+
Sbjct: 422 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 481

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +G +P+V++Y+TLIHG C +G  ++A  +  +M +    P+VTT S LID   K 
Sbjct: 482 EEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKK 541

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G ++ A+++   +I  GC  +VV  T +VK LC  +   +A  L  KM    C PN VT 
Sbjct: 542 GKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTC 601

Query: 379 NTFIKGLCGCGRVDWAMKL----LDQMKQY--ECLPNITTYNELLDGLLRVNRVKEAFEL 432
            T +KGLC  G +  A++L    L     Y   C PN  +Y+ ++DGL +  R  EA EL
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             E++  G+  ++++Y +++HG CR+G   +A  L  +M+  G + D  TF+++I   CK
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +GKV  A +LL+ +   G   P+ ++YT+L+ G+C +  + EA     KM   G  P+  
Sbjct: 722 EGKVIEANELLEVMIQRG-CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVV 780

Query: 553 TWNVLVRSL 561
           T+  L++ L
Sbjct: 781 TYGTLMKGL 789



 Score =  287 bits (735), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 172/515 (33%), Positives = 282/515 (54%), Gaps = 24/515 (4%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ ++  L  E+R S    ++ +M++ G  P+  TY  L+K LC+   ++ A +L  EM 
Sbjct: 385 YSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEML 444

Query: 128 NK------GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLC 176
           N        C P  +SY+ I+  +CK  + +EAREL     A      V  Y  LI+G C
Sbjct: 445 NDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFC 504

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              K E+A  L  EM+D GI P+V T S +I  LC  G V  +  +L  +  RGC  ++ 
Sbjct: 505 LSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVV 564

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           + T+L+KG  +  R  +A+ L+ +M + G +PNVV  +TL+ GLC +G++  A+ +   M
Sbjct: 565 TCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNM 624

Query: 297 EENS------CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
             ++      C PN  +YS +IDG  K G    A +++  M + G  P+V++YT ++   
Sbjct: 625 LSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGF 684

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C++  +  A  L  +M      P+  TF+  I  LC  G+V  A +LL+ M Q  C+PN 
Sbjct: 685 CRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNT 744

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  L+ GL   +R+ EA +L  +++K G   ++VTY T++ G+C+ G +  A +L  K
Sbjct: 745 VTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKK 804

Query: 471 MLIE----GT--KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           ML +    GT  K D I+++III   CK G+ + A +L   ++  G   P++ISYTSL+ 
Sbjct: 805 MLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI-PNVISYTSLIH 863

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           G C SG +++A     +M+++G+  N  T++V++ 
Sbjct: 864 GFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 898



 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/456 (33%), Positives = 257/456 (56%), Gaps = 17/456 (3%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KPT+  Y+ I+D L  + R      ++  MK  G+ P+V +Y  L+   C + + + A  
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 514

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVSVYN--ALINGLC 176
           L  EM + G  PD  + + ++  +CK G+V EA    E+ ++ G  + V     L+ GLC
Sbjct: 515 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLC 574

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR------G 230
            +H+I +A  L  +M   G  PNV+T +T++  LC  GN++ +L +   M          
Sbjct: 575 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 634

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN  S++ ++ G    GR  EA +L+  M   G +P+V++Y++LIHG C +G   +A 
Sbjct: 635 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 694

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  +M +    P+VTT+S LID   K G ++ A+++   MI  GC PN V YT +VK L
Sbjct: 695 YLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL 754

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM----KLLDQMKQYEC 406
           C N+   +A  L  KM    C P+ VT+ T +KGLC  G +  A+    K+L    QY  
Sbjct: 755 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814

Query: 407 --LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P++ +Y+ ++DGL +  R  EA EL  E++  G+  N+++Y +++HG CR+G + +A
Sbjct: 815 NFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDA 874

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             L  +M+ +G +L+A+T++++I+ +CK+G+++ A+
Sbjct: 875 KHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 160/501 (31%), Positives = 268/501 (53%), Gaps = 32/501 (6%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT---------I 141
           M+  G+ P+ FT+NIL+  LC   RV+     +  +  +G  PD V+Y+          +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 142 VSSICKLGQVEEAREL---AMRFGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +  +CK G+V EA EL    ++ G    +  Y+ LI GLC EH+I EA WL   M   G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQM------FVRGCNPNIHSFTSLLKGYLLGGR 250
            P+ ITY T++  LC  GN+  +L +  +M      +   C P + S++ ++ G     R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L+  M  +G +P+V++Y++LIHG C +G  ++A  +  +M +    P+VTT   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LID F K G ++ A+++   M+  GC  ++V Y+ ++K LC  +   +A  L   M    
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM----KQY--ECL-PNITTYNELLDGLLRV 423
           C P+ + + T +KGLC  G+++ A+ L  +M     QY  +C+ P++TT + L+D L + 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +V EA EL+  + + G  L+IVTY+T++ G+C    + EA  L   M   G + DAIT+
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 484 NIIIYAYCKQGKVNNAIQLL-----DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             ++   C+ G +N A+QL      D  R G +  P +ISY+ ++ G+C      EA   
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 480

Query: 539 LQKMLNEGICPNFATWNVLVR 559
            ++M  +GI P+  ++  L+ 
Sbjct: 481 FEEMKAQGIMPDVISYTTLIH 501



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 175/595 (29%), Positives = 299/595 (50%), Gaps = 66/595 (11%)

Query: 32  VFISVINSYRRV--GLAEQALKM----FYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           + I+ + + +RV  GLA  A  M       I  + ++P V   + ++D L  E +    N
Sbjct: 15  ILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEAN 74

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +   M + G   ++ TY+ L+K LC  +R+  A  L + M   GC PDA++Y T++  +
Sbjct: 75  ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 134

Query: 146 CKLGQVEEARELAM-------RFG----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           C+ G +  A +L         R+G      +  Y+ +I+GLCK+ + +EA  L  EM  +
Sbjct: 135 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 194

Query: 195 GIDPNVITYSTIISSLCDVGNVE------------------TSLGILGQMFV-------- 228
           G+ P+VI+Y+++I   C  G  E                  T+ G+L  MF         
Sbjct: 195 GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254

Query: 229 ---------RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
                    RGC  +I ++++L+KG  +  R  EA+ L+  M + G  P+ +AY TL+ G
Sbjct: 255 NELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314

Query: 280 LCSNGSMDEAVSVSYQMEENSCP-------PNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           LC  G ++ A+ +  +M  ++         P+VTT S LID   K G ++ A+++   MI
Sbjct: 315 LCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMI 374

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC  ++V Y+ ++K LC  +   +A  L   M    C P+ +T+ T +KGLC  G ++
Sbjct: 375 QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNIN 434

Query: 393 WAMKLLDQMKQ------YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
            A++L  +M         +C P + +Y+ ++DGL +  R  EA EL  E++  GI  +++
Sbjct: 435 IALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVI 494

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +Y T++HG C +G   +A  L  +ML  G + D  T +++I   CK+GKV  A +LL+ +
Sbjct: 495 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 554

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              G    D+++ T+L+ G+C    + +A     KM   G  PN  T   L++ L
Sbjct: 555 IQRG-CILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 608



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 11/150 (7%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD------GMEPNVF 101
           +A ++F ++++ G  P V  Y  ++  L           ++  M  D        +P+V 
Sbjct: 762 EATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVI 821

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +Y+I++  LCK+ R D A +L  EM   G  P+ +SYT+++   C+ G++E+A+ L    
Sbjct: 822 SYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEM 881

Query: 162 -GSGVSV----YNALINGLCKEHKIEEAFW 186
              GV +    Y+ +I+G CKE +I++A +
Sbjct: 882 VDQGVQLNAVTYSVMIHGFCKEGQIDKALF 911



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 17/84 (20%), Positives = 41/84 (48%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+   + G  ++A ++F  ++  G+ P V  Y  ++       +      +++ M   G
Sbjct: 826 IIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQG 885

Query: 96  MEPNVFTYNILLKALCKNNRVDGA 119
           ++ N  TY++++   CK  ++D A
Sbjct: 886 VQLNAVTYSVMIHGFCKEGQIDKA 909


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 177/570 (31%), Positives = 292/570 (51%), Gaps = 14/570 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  +I+     ++Q+ V+G+ C    F   I+   R      A  +F  +R+ G
Sbjct: 22  LLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHG 80

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN +L  L    R S    +Y  M + G  P+V TYN LL   CK  ++D A 
Sbjct: 81  FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEAL 140

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           K+      +G  PD V+Y  +++  CK  +++EA+ +  R  S      V  YN+L+NGL
Sbjct: 141 KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGL 200

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETSLGILGQMFVRGCNPN 234
           CK  +++EA  L+   VD+G  PNVITYST+IS LC ++  +E++  +L +M + GC P+
Sbjct: 201 CKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPD 257

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I S+ +L+ G        EA  L+  ++R+G+ P V  Y+ LI GL     ++EA  +  
Sbjct: 258 IVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 317

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            + ++   P+  TY+  IDG  KAG +  A  +   M   GC P+VV++  ++  LC+  
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 377

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A  L+  M  + C PN ++FNT I G C  G+   AM    +M +    P + TYN
Sbjct: 378 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 437

Query: 415 ELLDGLLRVN---RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            L+DGL +     R+KEA  L   + + G   ++VTY+ ++ G+ +AG + +A +LLG M
Sbjct: 438 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 497

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
             +G   +  T+N +I   C   KV+ A++L   +   G   PD I+Y +++  +C    
Sbjct: 498 EAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG-CVPDTITYGTIISALCKQEM 556

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + +A       L  G+ P    +  L+  L
Sbjct: 557 VDKALALFDGSLEAGVVPTSGMYFSLIDGL 586



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 234/498 (46%), Gaps = 82/498 (16%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q L ++M   G S     + ++++ + +VG  ++ALK+F    + G  P V  YN +++ 
Sbjct: 105 QALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALING 164

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
               ++      I   M  + + P+V TYN L+  LCKN RVD A  L+V   +KG +P+
Sbjct: 165 FCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPN 221

Query: 135 AVSYTTIVSSICK-LGQVEEARELAMR--------------------------------F 161
            ++Y+T++S +C+ L ++E AR+L  +                                F
Sbjct: 222 VITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLF 281

Query: 162 GS--------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           GS         V  YN LI+GL KE ++ EAF L   +V  G++P+ ITY+  I  LC  
Sbjct: 282 GSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 341

Query: 214 GNVETSL-----------------------------------GILGQMFVRGCNPNIHSF 238
           G VE +L                                    +L  M  +GC+PN  SF
Sbjct: 342 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 401

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS---NGSMDEAVSVSYQ 295
            +L+ G    G+  +A   +  M++ G  P VV Y+ L+ GLC     G + EA+++   
Sbjct: 402 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDA 461

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P+V TYSALIDG  KAG L  A ++   M + GC PNV  Y  ++  LC  + 
Sbjct: 462 MIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDK 521

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L   M  + C P+T+T+ T I  LC    VD A+ L D   +   +P    Y  
Sbjct: 522 VDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFS 581

Query: 416 LLDGLLRVNRVKEAFELV 433
           L+DGL  V RV EA +L+
Sbjct: 582 LIDGLCAVARVDEALKLL 599



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 190/397 (47%), Gaps = 43/397 (10%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++  + LL++M + G       + ++I+   R     +ALK+F  +   G +P V  YN
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D LL E+R +    ++S + + G+EP+  TY + +  LCK  RV+ A  +L +M  K
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           GC PD VS+  +++ +CK  +V+EA  L     A         +N LI G C+  K ++A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDV---GNVETSLGILGQMFVRGCNPNIHSFTSL 241
                EM+ RG+ P V+TY+ ++  LC     G ++ ++ +   M  +G  P++ ++++L
Sbjct: 418 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSAL 477

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    G+  +A  L   M  +G +PNV  Y++LI GLC    +DEA+ +   M E  C
Sbjct: 478 IDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGC 537

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  TY  +I                                     LC+  M  +A +
Sbjct: 538 VPDTITYGTIISA-----------------------------------LCKQEMVDKALA 562

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           L +        P +  + + I GLC   RVD A+KLL
Sbjct: 563 LFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 110/192 (57%), Gaps = 2/192 (1%)

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+  T    ++ L   G+++ A + ++Q+   + L +I+T+N  + GL R +R+ +A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQL-LVKGLCDISTFNIYISGLCRASRIGDAQTV 72

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + K G   N +TYN +L G+C  G + +A  L  +M+  G   D +T+N +++ +CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            GK++ A+++ D     G + PD+++Y +L+ G C +  + EA   LQ+M++E + P+  
Sbjct: 133 VGKLDEALKIFDGAVKRG-FVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191

Query: 553 TWNVLVRSLFSN 564
           T+N LV  L  N
Sbjct: 192 TYNSLVNGLCKN 203



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  ++D  + LL  M+ +G   +   + S+I+    +   ++AL++F  + E G
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  I+ AL  +        ++      G+ P    Y  L+  LC   RVD A 
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596

Query: 121 KLL 123
           KLL
Sbjct: 597 KLL 599


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 165/532 (31%), Positives = 283/532 (53%), Gaps = 6/532 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I +Y +     +  + F  +R  G   ++   N +L  L+  +   +   ++  +
Sbjct: 50  VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV 109

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G+E NV+T NI++ ALCK+ + D     L EM   G   D V+Y T++ + C+ G +
Sbjct: 110 VRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLL 169

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA E+            +  YNA+INGLCK+ +   A  +L EM++ G+ P+  TY+T+
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C   N   +  I G+M  +G  P++ SF+SL+  +       +A   +  M + G 
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+ V Y+ L+HG C NG+M EA+ +  +M E  C  +V  Y+ +++G  K   L  A +
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +++ M+  G  P+   +T ++   CQ+    +A SL   M   N  P+ V +NT I G C
Sbjct: 350 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFC 409

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G ++ A +L D M   +  PN  TY  L++    V  V EAF L   + + GI+  +V
Sbjct: 410 KVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLV 469

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T NT++ G CR+G   +A + LG+M+ +G   D I++N +I  + ++  ++ A   ++++
Sbjct: 470 TCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKM 529

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G   PDII+Y  ++ G C  G MQEA + L+KM+ +GI P+ +T+  L+
Sbjct: 530 EKEGLL-PDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 259/520 (49%), Gaps = 41/520 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  + D V+  L +M+  G+      + ++I +Y R GL E+A +         
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFE--------- 174

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                                     I ++M   G++P++FTYN ++  LCK  R   A 
Sbjct: 175 --------------------------IMNSMADKGLKPSLFTYNAIINGLCKKGRYARAK 208

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
            +L+EM N G +PD  +Y T++   C+     EA+E+    +R G    +  +++LI   
Sbjct: 209 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVF 268

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +++A     +M   G+ P+ + Y+ ++   C  GN+  +L I  +M  +GC  ++
Sbjct: 269 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 328

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ ++L G        +A  L++ M+  G LP+   ++TLIHG C +G+M +A+S+   
Sbjct: 329 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 388

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M + +  P++  Y+ LIDGF K G +  AS++W+ MIS    PN + Y  ++   C    
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L + M  +   P  VT NT IKG C  G    A + L +M      P+  +YN 
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++G +R + + +AF  + ++EK G+  +I+TYN +++G CR G + EA  +L KM+ +G
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
              D  T+  +I  +  Q  +N A +  D +   G + PD
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG-FAPD 607



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 226/477 (47%), Gaps = 24/477 (5%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC------------------- 146
           ++    ++ R+  A  L++ M  +           +VSS+C                   
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60

Query: 147 --KLGQVEEARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
             KL +  EA  +    G  VS+   N+L+ GL K   +E A+ +  E+V  GI+ NV T
Sbjct: 61  ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
            + ++++LC  G  +     L +M   G   ++ ++ +L+  Y   G   EA ++ N M 
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA 180

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
            +G  P++  Y+ +I+GLC  G    A  +  +M      P+ TTY+ L+    +  N  
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFS 240

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A +I+  M+  G  P++V+++ ++ V  +N    QA      M      P+ V +   +
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLM 300

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            G C  G +  A+K+ D+M +  C+ ++  YN +L+GL +   + +A +L  E+ + G  
Sbjct: 301 HGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGAL 360

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            +  T+ T++HG C+ G + +A  L G M     K D + +N +I  +CK G++  A +L
Sbjct: 361 PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASEL 420

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            D +     + P+ I+Y  L+   C+ G + EAF     M+ +GI P   T N +++
Sbjct: 421 WDGMISRKIF-PNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 476


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 170/537 (31%), Positives = 287/537 (53%), Gaps = 6/537 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I SY +     +    F  +R  G   ++   N +L  L+      +   +Y+ +
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G+E NV+T NI++ ALCK++++D     L++M  KG   D V+Y T++++ C+ G +
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 152 EEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA E+     G G+      YNA+INGLCK+ +   A  +  EM+  G+ P+  TY+T+
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C   N   +  I   M  RG +P++ SF+SL+      G   +A   +  M   G 
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+ V Y+ LI+G C NG M EA+ +  +M E  C  +V  Y+ +++G  K   L  A+ 
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +++ M+  G  P+   +T ++   C+     +A SL   M  +N  P+ VT+N  I G C
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFC 476

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
               ++ A +L ++M   +  PN  +Y  L++G   +  V EAF L  E+ + GI+  +V
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T NT++ G CR+G + +A + LGKM+ EG   D+IT+N +I  + K   ++ A  L++++
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKM 596

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              G   PD+++Y  +L G C  G MQEA + L+KM+  GI P+ +T+  L+    S
Sbjct: 597 ETKG-LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVS 652



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 263/515 (51%), Gaps = 31/515 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  +ID V+  L  M+ +G+      + ++IN+Y R GL  +A ++   +   G
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKPT+  YN +++ L  + R+     +++ M   G+ P+  TYN LL   C+NN    A 
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  +M ++G +PD +S+++++                     GVS  N           
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLI---------------------GVSSRNG---------H 340

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A     +M   G+ P+ + Y+ +I+  C  G +  +L I  +M  +GC  ++ ++ +
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L G        +A+ L++ M+  G +P+   ++TLIHG C  G+M +A+S+   M + +
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P++ TY+ LIDGF K   +  A+++WN MIS    PN ++Y  +V   C      +A 
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L ++M  +   P  VT NT IKG C  G +  A + L +M      P+  TYN L++G 
Sbjct: 521 RLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++   + +AF L+ ++E  G+Q ++VTYN IL+G CR G + EA  +L KM+  G   D 
Sbjct: 581 VKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDR 640

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            T+  +I  Y  Q  +  A +  D +   G + PD
Sbjct: 641 STYTTLINGYVSQDNLKEAFRFHDEMLQRG-FVPD 674



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 188/407 (46%), Gaps = 24/407 (5%)

Query: 177 KEHKIEEAFWLLCEMVDR-GIDPNVITYSTI-ISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +  ++ +A  L+  M+ R G+    I  S I +SS C V N+                  
Sbjct: 75  RSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNL------------------ 116

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
              F  L++ Y+   + +E +D +  + R+GFL ++ A ++L+ GL   G +D A  V  
Sbjct: 117 --VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYN 174

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++  +    NV T + +++   K   +         M   G   ++V Y  ++   C+  
Sbjct: 175 EIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREG 234

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +A  ++  M+ +   P   T+N  I GLC  GR   A  + ++M      P+ TTYN
Sbjct: 235 LLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYN 294

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LL    R N   EA ++ +++   G+  +++++++++    R G + +A      M   
Sbjct: 295 TLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS 354

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D + + I+I  YC+ G ++ A+++ D++   G    D+++Y ++L G+C    + +
Sbjct: 355 GLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG-CALDVVAYNTILNGLCKKKLLAD 413

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           A     +M+  G+ P+F T+  L+       G++G    L  IM  K
Sbjct: 414 ANALFDEMVERGVVPDFCTFTTLIHG-HCKEGNMGKALSLFGIMTQK 459


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  295 bits (755), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 168/572 (29%), Positives = 302/572 (52%), Gaps = 8/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           M++KLG   + + ++ LL +M+     +  EGV++  +  Y R G  ++A+  F R+  F
Sbjct: 125 MLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLF 184

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
              P+V  YN I++ L+    F+  + +Y  MK   +E +V+TY I +K+ C+  R   A
Sbjct: 185 NCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAA 244

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALING 174
            +LL  M   GC  +AV+Y T+V+   + G  + AREL            V+ +N L++ 
Sbjct: 245 LRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHA 304

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+  + E+  L  +++ RG+ PN+ T++  I  LC  G+++ ++ +LG +   G  P+
Sbjct: 305 LCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPD 364

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +++ G     R  EA +  ++M+  GF PN   Y+++I G C  G + +A  +  
Sbjct: 365 VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILK 424

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
                   P+  TY +L++GF + G+   A  ++   +  G  P+++ Y  ++K LCQ  
Sbjct: 425 DAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQG 484

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +   A  L+ +MA + C P+  T+N  I GLC  G +  A  L+       C+P+I TYN
Sbjct: 485 LILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYN 544

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  R  ++  A ELV  +   G+  +++TYNT+L+G+C+     E  ++   M  +
Sbjct: 545 TLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEK 604

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + IT+N II + C   KVN A+ LL  ++  G   PD++S+ +L+ G C  G +  
Sbjct: 605 GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKG-LTPDVVSFGTLITGFCKVGDLDG 663

Query: 535 AFIYLQKMLNE-GICPNFATWNVLVRSLFSNL 565
           A+   + M  +  +    AT+N+++ +    L
Sbjct: 664 AYGLFRGMEKQYDVSHTTATYNIIISAFSEQL 695



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 255/528 (48%), Gaps = 41/528 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M V G   +   + +V+  +   G  ++A ++F  + E  L P V  +N ++ AL 
Sbjct: 247 LLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALC 306

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++  + + G+ PN+FT+NI ++ LCK   +D A +LL  +  +G  PD V
Sbjct: 307 KKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVV 366

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +C+  +V EA E   +     F      YN++I+G CK+  + +A  +L + 
Sbjct: 367 TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDA 426

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G  P+  TY ++++  C  G+ + ++ +      +G  P+I  + +L+KG    G  
Sbjct: 427 VFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLI 486

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L N M  +G  P++  Y+ +I+GLC  G + +A  +        C P++ TY+ L
Sbjct: 487 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTL 546

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG+ +   L  A ++ NRM S G +P+V+ Y  ++  LC+     +   + + M  + C
Sbjct: 547 VDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGC 606

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN------- 424
            PN +T+NT I+ LC   +V+ A+ LL +MK     P++ ++  L+ G  +V        
Sbjct: 607 APNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYG 666

Query: 425 -----------------------------RVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                                         +K A  L +E++K G   +  TY  ++ G 
Sbjct: 667 LFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGF 726

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           C+ G V + ++ L + + +G      TF  ++   C + KV  A+ ++
Sbjct: 727 CKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 774



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 237/488 (48%), Gaps = 9/488 (1%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           + L  ++   GV  +   F   I    + G  ++A+++   +   GL+P V  YN ++  
Sbjct: 315 ERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICG 374

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L  ++R          M   G EPN FTYN ++   CK   V  A ++L +   KG  PD
Sbjct: 375 LCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPD 434

Query: 135 AVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
             +Y ++V+  C+ G  ++A       L       + VYN LI GLC++  I  A  L+ 
Sbjct: 435 EFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMN 494

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM ++G  P++ TY+ II+ LC +G +  +  ++G    +GC P+I ++ +L+ GY    
Sbjct: 495 EMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQL 554

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +   A +L NRM  +G  P+V+ Y+TL++GLC     +E + +   M E  C PN+ TY+
Sbjct: 555 KLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYN 614

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +I+    +  +  A  +   M S G +P+VV++  ++   C+      A+ L   M  +
Sbjct: 615 TIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQ 674

Query: 370 -NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            +    T T+N  I        +  A++L  +MK+  C P+  TY  L+DG  +   V +
Sbjct: 675 YDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQ 734

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
            ++ + E  + G   ++ T+  +L+ +C    V EA  ++  M+ +    D +     I+
Sbjct: 735 GYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN---TIF 791

Query: 489 AYCKQGKV 496
              K+G +
Sbjct: 792 EADKKGHI 799



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 216/437 (49%), Gaps = 8/437 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L  K  +   +  L +M   G   ++  + S+I+ Y + G+   A ++       G KP 
Sbjct: 375 LCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPD 434

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              Y  +++    +        ++ +    G+ P++  YN L+K LC+   +  A +L+ 
Sbjct: 435 EFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMN 494

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEH 179
           EM  KGC PD  +Y  I++ +CK+G + +A  L   A+  G    +  YN L++G C++ 
Sbjct: 495 EMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQL 554

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K++ A  L+  M  +G+ P+VITY+T+++ LC     E  + I   M  +GC PNI ++ 
Sbjct: 555 KLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYN 614

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           ++++      + +EA DL   M  +G  P+VV++ TLI G C  G +D A  +   ME+ 
Sbjct: 615 TIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQ 674

Query: 300 SCPPNVT-TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               + T TY+ +I  F++  N+  A ++++ M  NGC P+   Y  ++   C+    +Q
Sbjct: 675 YDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQ 734

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
            +  + +   +   P+  TF   +  LC   +V  A+ ++  M Q + +P+  T N + +
Sbjct: 735 GYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNTIFE 792

Query: 419 GLLRVNRVKEAFELVTE 435
              + +    A+E + +
Sbjct: 793 ADKKGHITYHAYEFLYD 809



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 193/397 (48%), Gaps = 7/397 (1%)

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS-FTSLLKGYL 246
           L +   +G    + TY +++  L   G       +L +M     N  +   +   ++ Y 
Sbjct: 107 LIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYG 166

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+  EA D + RM      P+V +Y+ +++ L   G  ++A  V  +M++     +V 
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+  I  F + G    A ++   M   GC  N VAY  +V    +     +A  L ++M
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 367 AFENCP-PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
             E C  P+  TFN  +  LC  G V  + +L D++ +    PN+ T+N  + GL +   
Sbjct: 287 -LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +  A  L+  + + G++ ++VTYNT++ G+CR   VVEA + L KM+  G + +  T+N 
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405

Query: 486 IIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           II  YCK+G V +A ++L D +  G  + PD  +Y SL+ G C  G   +A    +  L 
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKG--FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLG 463

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +G+ P+   +N L++ L    G + P   L + MA K
Sbjct: 464 KGLRPSIIVYNTLIKGLCQQ-GLILPALQLMNEMAEK 499



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 31/202 (15%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REF 59
           +IE L    +++    LL +MK +G++     F ++I  + +VG  + A  +F  + +++
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            +  T   YN I+ A   +    M   ++S MK++G +P+ +TY +L+   CK   V+  
Sbjct: 676 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQG 735

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
           YK L+E   KG  P                               ++ +  ++N LC EH
Sbjct: 736 YKFLLENIEKGFIP------------------------------SLTTFGRVLNCLCVEH 765

Query: 180 KIEEAFWLLCEMVDRGIDPNVI 201
           K++EA  ++  MV + I P+ +
Sbjct: 766 KVQEAVGIIHLMVQKDIVPDTV 787


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 272/520 (52%), Gaps = 6/520 (1%)

Query: 47  EQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           ++A+K F +   + G K +    N +L A + + +      ++ N +     P+  TY+ 
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRF 161
           L+   CK      AY+LL EM  +G  P    Y TI+  +C  G+V+ A    R++    
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNC 232

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  L++ LCK  +I +A  +L +M++ G  PNV+TY+T+I+  C +GN++ ++ 
Sbjct: 233 APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVV 292

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  QM    C+P++ ++  L+ GY    R  + + L   M++ G  PN + Y+TL+  L 
Sbjct: 293 LFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLV 352

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
            +G   +A +++  M    C P+  T++ +ID F K G L  A +++  M   GC P++ 
Sbjct: 353 KSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIY 412

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  M+   C+ N    A  L+E+M    CPP+ VT+N+ + GLC   +VD A ++ + +
Sbjct: 413 TYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVL 472

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +      ++ T + L+DGL +  R+ +A +L+ E+E+ G   ++V Y  ++HG C+A  +
Sbjct: 473 RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQL 532

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            ++     +ML +G     IT++I+I   CK  +V +   LL  +   G   PD I YTS
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG-VTPDAIVYTS 591

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G+C S    EA+   + M   G  P   T+NVLV  L
Sbjct: 592 VIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 276/537 (51%), Gaps = 7/537 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++IN + +    +QA ++   + + G+ P   +YN I+  L    R       Y +M
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 228

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +R+   P+V TY IL+ ALCK+ R+  A  +L +M   GCAP+ V+Y T+++  CKLG +
Sbjct: 229 QRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 287

Query: 152 EEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA     + L       V  YN LI+G CK+ + ++   LL EMV  G +PN ITY+T+
Sbjct: 288 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 347

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           + SL   G    +  +   M  R C P+  +F  ++  +   G+   A +L+  M   G 
Sbjct: 348 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP++  Y+ +I G C    +D+A  +  +M E  CPP+V TY++++ G  KA  +  A +
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  + + G   +VV  + ++  LC++     A  L+ +M      P+ V +   I G C
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              ++D ++    +M    C+P + TY+ ++D L +  RV++   L+  + + G+  + +
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y +++ G+C++    EA++L   M   G     +T+N+++   CK  +++ AI LL+ +
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM 647

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              G   PD ++Y S+  G   S    +AF   Q M + G  P    +++L+  L +
Sbjct: 648 ESDGCL-PDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVA 703



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 241/484 (49%), Gaps = 5/484 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   I     +L+ M   G + +   + ++IN + ++G  ++A+ +F ++ E  
Sbjct: 242 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN ++D    + R      +   M + G EPN  TYN L+ +L K+ +   A+
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L   M  + C P   ++  ++   CK+GQ++ A EL            +  YN +I+G 
Sbjct: 362 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 421

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+ ++I++A  LL  M + G  P+V+TY++I+S LC    V+ +  +   +   G   ++
Sbjct: 422 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + ++L+ G     R  +A  L   M R G  P+VVAY+ LIHG C    +D++++   +
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +  C P V TYS +ID   K+  +     +   M+  G +P+ + YT ++  LC+++ 
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           + +A+ L + M    C P  VT+N  +  LC   R+D A+ LL+ M+   CLP+  TYN 
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNS 661

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           + DG  +     +AF L   ++  G       Y+ +L  +     + +A ++  + L  G
Sbjct: 662 VFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721

Query: 476 TKLD 479
             +D
Sbjct: 722 ADVD 725



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G K    T N ++ A+ ++ K   A  L    R G   +PD I+Y++L+ G C +   Q+
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCG-LCSPDSITYSTLINGFCKARDFQQ 185

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           A+  L +M   GI P+ A +N +++ L  N
Sbjct: 186 AYRLLDEMEKRGIVPHNAVYNTIIKGLCDN 215


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 171/527 (32%), Positives = 281/527 (53%), Gaps = 12/527 (2%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A QA   F  +      P +  +N +L  L   N +S +  +Y+ M+  G+ P++FT +I
Sbjct: 72  AIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSI 131

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---- 161
           L   LC  NRV  A   +  +  +G  P+ V+YTT++  +C   ++ EA  L +R     
Sbjct: 132 LANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG 191

Query: 162 -GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR----GID--PNVITYSTIISSLCDVG 214
                  Y  LI GLC+   +  A  L  EM++     G++  P VITYS II  LC VG
Sbjct: 192 CTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVG 251

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             + +  +  +M  +G  P++ S+++L+ G+   G+  ++  L++ M+ +G  P++V +S
Sbjct: 252 REDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFS 311

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI  LC  G + EA  +   M +    PN+ TY++LIDGF   G+L  A +++  M S 
Sbjct: 312 VLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK 371

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P+ ++YT ++   C+     +A +L  +M      PN  T+ T +KGL   G+V  A
Sbjct: 372 GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDA 431

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            KL   MK Y    N   Y   LDGL + + + EA EL  E++    +LNI  Y+ ++ G
Sbjct: 432 KKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDG 491

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+AG +  A++L  K+  EG + D +T+NI+I+ +CK G+V+NA  L +++   G   P
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG-CTP 550

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           DII+Y +LL G C    ++E    L KM+ + + PN A+  ++V  L
Sbjct: 551 DIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDML 597



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/491 (31%), Positives = 256/491 (52%), Gaps = 18/491 (3%)

Query: 34  ISVINSYRRV--GLAE-----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           I  I+S+ R+  GLA+     Q   ++  +R  GL P +   + + + L   NR S    
Sbjct: 88  IPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALA 147

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
             + + R G  PNV TY  L+K LC  +R+  A +L + M   GC P+AV+Y T++  +C
Sbjct: 148 AMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLC 207

Query: 147 KLGQVEEAREL-------AMRFG----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           + G V  A +L       A ++G     GV  Y+ +I+GLCK  + +EA  L  EM  +G
Sbjct: 208 QTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQG 267

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+VI+YST+I   C  G  + S  +  +M  +G  P++ +F+ L+      G+  EA 
Sbjct: 268 MIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAK 327

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L   MI+ G +PN++ Y++LI G C  G ++ A  +   M      P+  +Y+ LI+G+
Sbjct: 328 KLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGY 387

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K   +  A  ++N M+  G SPNV  Y  ++K L Q      A  L   M       N+
Sbjct: 388 CKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANS 447

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
             +  F+ GLC    +  AM+L +++K Y    NI  Y+ L+DGL +  +++ A+EL  +
Sbjct: 448 QIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEK 507

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + + G+Q ++VTYN ++HG C+ G V  A  L  KM   G   D I +N ++  +C+  K
Sbjct: 508 LSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNK 567

Query: 496 VNNAIQLLDRI 506
           +   I+LL ++
Sbjct: 568 LEEVIKLLHKM 578



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 256/501 (51%), Gaps = 11/501 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M++ G+S        + N    V    +AL     I   G  P V  Y  ++  L 
Sbjct: 113 LYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLC 172

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG------ 130
            E+R S    ++  M++ G  PN  TY  L+K LC+   V+ A KL  EM N        
Sbjct: 173 MEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN 232

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
           C P  ++Y+ I+  +CK+G+ +EA+EL     A      V  Y+ LI+G C   K +++ 
Sbjct: 233 CKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSK 292

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EMVD+G+ P+++T+S +I +LC  G V  +  +L  M  RG  PN+ ++ SL+ G+
Sbjct: 293 HLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            + G  + A +L+  M  +G  P+ ++Y+TLI+G C    + EA+++  +M +    PNV
Sbjct: 353 CMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNV 412

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           TTY  L+ G  + G +  A +++  M + G S N   Y   +  LC+N+   +A  L  +
Sbjct: 413 TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNE 472

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +   N   N   ++  I GLC  G+++ A +L +++ Q    P++ TYN ++ G  +V +
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           V  A  L  ++E+ G   +I+ YNT+L G C    + E  +LL KM+ +    +A +  I
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTI 592

Query: 486 IIYAYCKQGKVNNAIQLLDRI 506
           ++   CK  K    + LL + 
Sbjct: 593 VVDMLCKDEKYKKFVDLLPKF 613



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 224/438 (51%), Gaps = 11/438 (2%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME------PNVF 101
           +A ++F R+++ G  P    Y  ++  L      ++   ++  M  D  +      P V 
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TY+I++  LCK  R D A +L  EM  +G  PD +SY+T++   C  G+ ++++ L    
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 162 -GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GV      ++ LI+ LCKE K+ EA  LL  M+ RGI PN+ITY+++I   C VG++
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            ++  +   M  +G  P+  S+T+L+ GY    +  EA +L+N M++ G  PNV  Y TL
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GL   G + +A  +   M+      N   Y   +DG  K   L  A +++N + S   
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             N+  Y+C++  LC+      A  L EK++ E   P+ VT+N  I G C  G+VD A  
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L ++M++  C P+I  YN LL G    N+++E  +L+ ++ +  +  N  +   ++  +C
Sbjct: 539 LFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLC 598

Query: 457 RAGMVVEAFQLLGKMLIE 474
           +     +   LL K  ++
Sbjct: 599 KDEKYKKFVDLLPKFPVQ 616



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 185/376 (49%), Gaps = 10/376 (2%)

Query: 211 CDVGNVET--SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           C  GN+    +      M      P I SF  LL G        +   L+N M   G  P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           ++   S L + LC+   + EA++    +      PNV TY+ LI G      +  A++++
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE------NCPPNTVTFNTFI 382
            RM   GC+PN V Y  ++K LCQ    + A  L ++M  +      NC P  +T++  I
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  GR D A +L ++MK    +P++ +Y+ L+ G     +  ++  L  E+   G+Q
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            ++VT++ ++  +C+ G V EA +LL  M+  G   + IT+N +I  +C  G +N+A +L
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              +   G   PD ISYT+L+ G C +  ++EA     +ML  G  PN  T+  L++ LF
Sbjct: 365 FLSMPSKG-LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLF 423

Query: 563 SNLGHLGPVYILDDIM 578
              G +G    L  +M
Sbjct: 424 QK-GKVGDAKKLFGVM 438



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L ++MK +G+      + ++I+ +   G  +Q+  +F  + + G++P +  ++ +
Sbjct: 254 DEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVL 313

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D L  E + +    +   M + G+ PN+ TYN L+   C    ++ A +L + M +KG 
Sbjct: 314 IDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL---AMRFGSG--VSVYNALINGLCKEHKIEEAFW 186
            PD +SYTT+++  CK  +V+EA  L    ++ G    V+ Y  L+ GL ++ K+ +A  
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKK 433

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L   M   G+  N   Y   +  LC    +  ++ +  ++       NI +++ L+ G  
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+   A +L+ ++ +EG  P+VV Y+ +IHG C  G +D A  +  +MEEN C P++ 
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDII 553

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            Y+ L+ GF +   L    ++ ++M+    SPN  + T +V +LC++  + +   L+ K 
Sbjct: 554 AYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKF 613

Query: 367 AFE 369
             +
Sbjct: 614 PVQ 616



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 148/297 (49%), Gaps = 5/297 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   + LL+ M   G+  +   + S+I+ +  VG    A ++F  +   G
Sbjct: 313 LIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG 372

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P    Y  +++      +      +Y+ M + G  PNV TY  LLK L +  +V  A 
Sbjct: 373 LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           KL   M   G + ++  Y   +  +CK   + EA EL     +  F   +  Y+ LI+GL
Sbjct: 433 KLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGL 492

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+E A+ L  ++   G+ P+V+TY+ +I   C VG V+ +  +  +M   GC P+I
Sbjct: 493 CKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDI 552

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++ +LL G+  G +  E   L ++M+++   PN  + + ++  LC +    + V +
Sbjct: 553 IAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 284/528 (53%), Gaps = 6/528 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++ +Y +     +  + F  +R  G+  ++   N +L  L+      +   IY  + R G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +E NV+T NI++ ALCK+ + +     L +M  KG   D V+Y T++++ C+ G VEEA 
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L   F S     G+  YNA++ GLCK  K + A  +L EM+  G+ PN  TY+T++  +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C   N+  +  I  +M  RG  P++ SF+SL+      G  ++A   +  M R G +P+ 
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ LI G C NG++ +A+ +  +M    C  +V TY+  ++G  K      A  ++N 
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+  G  P+   +T +++  C++    +A +L E M   N  P+ VT+NT I G C  G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A +L D M + + +P+  +Y  +L+G      + EA  L  ++ + GI+ N+VT NT
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G CR+G + +A++ L KM+  G   D+ ++N +I  Y K+  +  A  L++ +   G
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
               +II+Y  +L G C  G MQEA   L+KM+  GI P+ AT++ L+
Sbjct: 673 -LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 260/511 (50%), Gaps = 40/511 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  + + V + L  M+ +GV      + ++IN+Y R GL E+A           
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA----------- 311

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                               F ++N   S     GMEP + TYN +L  LCK  + D A 
Sbjct: 312 --------------------FQLLNSFSSR----GMEPGLLTYNAILYGLCKIGKYDRAK 347

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
            +L+EM   G  P+A +Y T++  IC+   + EA+E+     R G    +  +++LI  L
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   + +A     EM   GI P+ + Y+ +I   C  G +  +L +  +M  RGC  ++
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ + L G        +A  L+N M+  G +P+   ++TLI G C +G+MD+A+++   
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M   +  P+  TY+ LIDGF KAG +  A ++W+ MI     P+ ++Y  ++   C + +
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +L ++M  +   PN VT NT IKG C  G +  A + L +M     +P+  +YN 
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+DG L+   +++AF L+ E+EK G+Q NI+TYN IL+G C  G + EA Q+L KM+  G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
              D  T++ +I  +  Q  +  A +  D +
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEM 738



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 214/416 (51%), Gaps = 5/416 (1%)

Query: 147 KLGQVEEARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           KL +  EA ++  R G  VS+   N L+ GL +   ++ A+ +  E+V  GI+ NV T +
Sbjct: 202 KLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLN 261

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++++LC     E  +  L  M  +G   +I ++ +L+  Y   G   EA  L N     
Sbjct: 262 IMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P ++ Y+ +++GLC  G  D A  V  +M +    PN  TY+ L+    +  N+L A
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +I++ M   G  P++V+++ ++ VL +N   +QA     +M      P+ V +   I G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G +  A+K+ D+M    C  ++ TYN  L+GL +     +A  L  E+ + G+  +
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
             T+ T++ G C+ G + +A  L   M+    K D +T+N +I  +CK G++  A +L D
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 505 R-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             IR   +  PD ISY ++L G C+SG + EA     +ML +GI PN  T N L++
Sbjct: 562 DMIRK--DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615



 Score = 42.7 bits (99), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 52/117 (44%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L +M   G+      + ++I+ Y +    E+A  +   + + GL+  +  YN IL+   A
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           E +      +   M   G+ P+  TY+ L+      + +  A++   EM  +G  PD
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 169/554 (30%), Positives = 300/554 (54%), Gaps = 6/554 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V YL  QM + GV+ +      +IN   R+   + A+ ++ ++ + G++P V  +  +++
Sbjct: 112 VVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLIN 171

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            +  E +  +   +Y+ M R G EP+V +YN L+  LC +   + A  +  +M   GC P
Sbjct: 172 GVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKP 231

Query: 134 DAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           + V+Y TI+ S+CK   V +A + L+   G G+      YN++++GLC   ++ EA  L 
Sbjct: 232 NVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLF 291

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M   G  P+V+TY+ II SL     V  +   L +M  +G  P++ ++T++L G    
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYL 351

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+ +EA  L+ +M ++G  P+VVAY+T+I  LC +  +++A+    +M +   PPN  TY
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY 411

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S ++ GF   G L  A+Q++  M+     PN + ++ +V  LCQ  M  +A  + E M  
Sbjct: 412 STILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE 471

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PN  T+N  + G C   +++ A K+ + M    C P++ +YN L++G     R+ +
Sbjct: 472 KGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDK 531

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  L+T++    +  N VTYNTI+ G+C  G +++A +L  KM   G     +T++I++ 
Sbjct: 532 AKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLN 591

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             CK G ++ A++L   ++   +  PDII YT L+ G+   G ++ A     K+  +GI 
Sbjct: 592 GLCKHGHLDEALKLFKSMK-EKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQ 650

Query: 549 PNFATWNVLVRSLF 562
           P   T+NV+++ L 
Sbjct: 651 PPGRTYNVMIKGLL 664



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 161/541 (29%), Positives = 280/541 (51%), Gaps = 9/541 (1%)

Query: 9   CEIDGVQYLLQ---QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C ++ V + +    +M   G+      F ++IN     G  + A++++  +   G +P V
Sbjct: 139 CRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDV 198

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             YN +++ L      +M   ++  M+++G +PNV TYN ++ +LCK+  V+ A   L E
Sbjct: 199 ISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSE 258

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHK 180
           M  +G  PDA++Y +IV  +C LGQ+ EA  L  R         V  YN +I+ L K+  
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           + +A   L EMVD+GI P+V+TY+TI+  LC +G +  ++ +  +M  +GC P++ ++ +
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++         ++A +  + M+  G  PN V YST++HG C+ G +DEA  +  +M   +
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN  T+S L+DG  + G +  A  ++  M   G  PN+  Y  ++   C     ++A 
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            + E M  + C P+  ++N  I G C   R+D A  LL QM   +  PN  TYN ++ GL
Sbjct: 499 KVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             V R+ +A EL  ++   G+   ++TY+ +L+G+C+ G + EA +L   M  +  + D 
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDI 618

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           I + I+I      GK+  A  L  ++   G   P   +Y  ++ G+   G   EA+   +
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADG-IQPPGRTYNVMIKGLLKEGLSDEAYELFR 677

Query: 541 K 541
           K
Sbjct: 678 K 678



 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 163/540 (30%), Positives = 288/540 (53%), Gaps = 7/540 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  FYR+     +P++  +   L ++    ++S +  + + M   G+   V++ NIL
Sbjct: 75  DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNIL 134

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS 163
           +  LC+ N VD A  +  +M   G  PD +++TT+++ +C  G+++ A EL    +R G 
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194

Query: 164 GVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN LINGLC       A  +  +M   G  PNV+TY+TII SLC    V  ++ 
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
            L +M  RG  P+  ++ S++ G    G+ +EA+ L+ RM + G  P+VV Y+ +I  L 
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
            +  +++A     +M +   PP+V TY+ ++ G    G L  A +++ +M   GC P+VV
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           AY  ++  LC++ + + A   + +M     PPN VT++T + G C  G++D A +L  +M
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +PN  T++ L+DGL +   V EA  +   + + G++ NI TYN +++G C    +
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA ++   M+ +G   D  ++NI+I  YC   +++ A  LL ++    +  P+ ++Y +
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQM-SVKKLTPNTVTYNT 553

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           ++ G+C  G + +A    +KM + G+ P   T+++L+  L  + GHL     L   M  K
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH-GHLDEALKLFKSMKEK 612



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/448 (30%), Positives = 245/448 (54%), Gaps = 6/448 (1%)

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVY--NA 170
           VD A      M      P  V +   + SI K+ Q      L  +   FG   +VY  N 
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LIN LC+ + ++ A  +  +M   GI P+VIT++T+I+ +C+ G ++ ++ +  +M   G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             P++ S+ +L+ G    G T+ A  ++ +M + G  PNVV Y+T+I  LC +  +++A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
               +M     PP+  TY++++ G    G L  A++++ RM  NGC P+VV Y  ++  L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            ++ + + A   + +M  +  PP+ VT+ T + GLC  G+++ A++L  +M+Q  C P++
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDV 373

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             YN ++D L +   V +A E ++E+   GI  N VTY+TILHG C  G + EA QL  +
Sbjct: 374 VAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M+      + +TF+I++   C++G V+ A  + + +   G   P+I +Y +L+ G C   
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG-VEPNIYTYNALMNGYCLRC 492

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLV 558
            M EA    + M+ +G  P+  ++N+L+
Sbjct: 493 KMNEARKVFEIMVGKGCAPDLHSYNILI 520



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 230/437 (52%), Gaps = 5/437 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++     L +M   G+      + S+++    +G   +A ++F R+ + G
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN I+D+L  +   +      S M   G+ P+V TY  +L  LC   +++ A 
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAI 358

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           +L  +M  KGC PD V+Y TI+ S+CK   V +A E L+     G+      Y+ +++G 
Sbjct: 359 RLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGF 418

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +++EA  L  EMV R + PN +T+S ++  LC  G V  +  +   M  +G  PNI
Sbjct: 419 CNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNI 478

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++ +L+ GY L  + +EA  ++  M+ +G  P++ +Y+ LI+G C++  MD+A ++  Q
Sbjct: 479 YTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQ 538

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ ++ G    G LL A +++ +M S+G  P ++ Y+ ++  LC++  
Sbjct: 539 MSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGH 598

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L + M  +   P+ + +   I+G+   G+++ A  L  ++      P   TYN 
Sbjct: 599 LDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNV 658

Query: 416 LLDGLLRVNRVKEAFEL 432
           ++ GLL+     EA+EL
Sbjct: 659 MIKGLLKEGLSDEAYEL 675



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 203/398 (51%), Gaps = 5/398 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    L ++M+  G       +  +I+S  +  L   A      + + G+ P V  Y 
Sbjct: 283 QLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYT 342

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L    + +    ++  M++ G +P+V  YN ++ +LCK+  V+ A + L EM ++
Sbjct: 343 TILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR 402

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEA 184
           G  P+AV+Y+TI+   C LGQ++EA +L     G  V      ++ L++GLC+E  + EA
Sbjct: 403 GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEA 462

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
            W+   M ++G++PN+ TY+ +++  C    +  +  +   M  +GC P++HS+  L+ G
Sbjct: 463 RWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING 522

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y    R  +A  L  +M  +   PN V Y+T++ GLC  G + +A  +  +M  +   P 
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPT 582

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TYS L++G  K G+L  A +++  M      P+++ YT +++ +        A  L  
Sbjct: 583 LMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFS 642

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           K++ +   P   T+N  IKGL   G  D A +L  + K
Sbjct: 643 KLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 149/287 (51%), Gaps = 5/287 (1%)

Query: 279 GLCSNGS----MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           G  SN S    +D+A++  Y+M   +  P++  +   +   AK         + N+M   
Sbjct: 63  GFASNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLF 122

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G +  V +   ++  LC+ N    A S+  KM      P+ +TF T I G+C  G++  A
Sbjct: 123 GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVA 182

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           ++L ++M +    P++ +YN L++GL        A  +  ++E+ G + N+VTYNTI+  
Sbjct: 183 VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+  +V +A   L +M+  G   DAIT+N I++  C  G++N A +L  R+   G   P
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG-CKP 301

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D+++Y  ++  +     + +A  +L +M+++GI P+  T+  ++  L
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGL 348


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 284/528 (53%), Gaps = 6/528 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++ +Y +     +  + F  +R  G+  ++   N +L  L+      +   IY  + R G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +E NV+T NI++ ALCK+ + +     L +M  KG   D V+Y T++++ C+ G VEEA 
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L   F S     G+  YNA++ GLCK  K + A  +L EM+  G+ PN  TY+T++  +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C   N+  +  I  +M  RG  P++ SF+SL+      G  ++A   +  M R G +P+ 
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ LI G C NG++ +A+ +  +M    C  +V TY+  ++G  K      A  ++N 
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+  G  P+   +T +++  C++    +A +L E M   N  P+ VT+NT I G C  G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A +L D M + + +P+  +Y  +L+G      + EA  L  ++ + GI+ N+VT NT
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G CR+G + +A++ L KM+  G   D+ ++N +I  Y K+  +  A  L++ +   G
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
               +II+Y  +L G C  G MQEA   L+KM+  GI P+ AT++ L+
Sbjct: 673 -LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719



 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 155/511 (30%), Positives = 260/511 (50%), Gaps = 40/511 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  + + V + L  M+ +GV      + ++IN+Y R GL E+A           
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA----------- 311

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                               F ++N   S     GMEP + TYN +L  LCK  + D A 
Sbjct: 312 --------------------FQLLNSFSSR----GMEPGLLTYNAILYGLCKIGKYDRAK 347

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
            +L+EM   G  P+A +Y T++  IC+   + EA+E+     R G    +  +++LI  L
Sbjct: 348 DVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVL 407

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   + +A     EM   GI P+ + Y+ +I   C  G +  +L +  +M  RGC  ++
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ + L G        +A  L+N M+  G +P+   ++TLI G C +G+MD+A+++   
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M   +  P+  TY+ LIDGF KAG +  A ++W+ MI     P+ ++Y  ++   C + +
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +L ++M  +   PN VT NT IKG C  G +  A + L +M     +P+  +YN 
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+DG L+   +++AF L+ E+EK G+Q NI+TYN IL+G C  G + EA Q+L KM+  G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
              D  T++ +I  +  Q  +  A +  D +
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEM 738



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 214/416 (51%), Gaps = 5/416 (1%)

Query: 147 KLGQVEEARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           KL +  EA ++  R G  VS+   N L+ GL +   ++ A+ +  E+V  GI+ NV T +
Sbjct: 202 KLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLN 261

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++++LC     E  +  L  M  +G   +I ++ +L+  Y   G   EA  L N     
Sbjct: 262 IMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSR 321

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P ++ Y+ +++GLC  G  D A  V  +M +    PN  TY+ L+    +  N+L A
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +I++ M   G  P++V+++ ++ VL +N   +QA     +M      P+ V +   I G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G +  A+K+ D+M    C  ++ TYN  L+GL +     +A  L  E+ + G+  +
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
             T+ T++ G C+ G + +A  L   M+    K D +T+N +I  +CK G++  A +L D
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWD 561

Query: 505 R-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             IR   +  PD ISY ++L G C+SG + EA     +ML +GI PN  T N L++
Sbjct: 562 DMIRK--DIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIK 615



 Score = 42.7 bits (99), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 52/117 (44%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L +M   G+      + ++I+ Y +    E+A  +   + + GL+  +  YN IL+   A
Sbjct: 630 LSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCA 689

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           E +      +   M   G+ P+  TY+ L+      + +  A++   EM  +G  PD
Sbjct: 690 EGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  292 bits (747), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 170/497 (34%), Positives = 272/497 (54%), Gaps = 18/497 (3%)

Query: 100 VFTYNILLKALCKNNRVDGAYKLLV-EMGNKGCAPDAVSYTTIVSSICK---LGQVEEAR 155
           V  YNI+L++LC+      A ++   EM   G AP  V+Y TI++ +CK   LG   E  
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 156 ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           E  +  G    V  YN LI+ LCK   +EEA  L  +M  RG  PNV+TYS +I+ LC V
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 214 GNVETSLGILGQMFVRGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL---P 268
           G ++ +  ++ +M  + C+  PNI ++ S L G      T EA +L  R +R+G L   P
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSP 179

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           + V +STLI GLC  G +DEA SV   M      PNV TY+AL++G  KA  +  A  + 
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT-----VTFNTFIK 383
             M+  G +P+V+ Y+ +V   C+ +   +A  L+  MA   C PN      VTFN  I 
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  G  + A  L ++M      P++ T+  L+DGL +  +V+ A +++  +   G+  
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+VTYN ++HG+C++G + EA Q L +M+  G   D+IT+  ++YA C+  + ++A+QL+
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             ++  G W+PD ++Y  L+ G+  SG  ++A   L++M+ +G  P+  T+      L  
Sbjct: 420 SELKSFG-WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHR 478

Query: 564 NLGHLGPVYILDDIMAN 580
           +    G + +L  ++A 
Sbjct: 479 SGNLAGTMELLRVVLAK 495



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 269/514 (52%), Gaps = 16/514 (3%)

Query: 36  VINSYRRVGLAEQALKMFY-RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           V+ S  R G   +AL++F   +   G+ PT+  YN I++ L   N       ++  +   
Sbjct: 7   VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+V TYN L+ +LCK   ++ A +L  +M ++GC P+ V+Y+ +++ +CK+G+++EA
Sbjct: 67  GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126

Query: 155 RELAMRFG-------SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG--IDPNVITYST 205
           REL              +  YN+ ++GLCK+    EA  L+  + D    + P+ +T+ST
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC  G ++ +  +   M   G  PN+ ++ +L+ G     +   A  +   M+ +G
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV-----TTYSALIDGFAKAGN 320
             P+V+ YS L+   C    +DEA+ + + M    C PNV      T++ LI G  KAGN
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              AS ++  M++    P+V+ +  ++  LC+      A  +++ M     PPN VT+N 
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            + GLC  GR++ A + L++M    C+P+  TY  L+  L R +R  +A +LV+E++  G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              + VTYN ++ G+ ++G   +A  +L +M+ +G + D+ TF        + G +   +
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTM 486

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           +LL  +   G   PD  + +S+L  +C SG + +
Sbjct: 487 ELLRVVLAKGML-PDATTCSSILDWVCRSGKLDD 519



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 259/493 (52%), Gaps = 14/493 (2%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           +M  +GV+ +   + ++IN   +       +++F  + E G  P V  YN ++D+L    
Sbjct: 27  EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA--PDAVS 137
                  ++ +M   G  PNV TY++L+  LCK  R+D A +L+ EM  K C   P+ ++
Sbjct: 87  DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 146

Query: 138 YTTIVSSICKLGQVEEAREL-------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           Y + +  +CK     EA EL       ++R       ++ LI+GLCK  +I+EA  +  +
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+  G  PNVITY+ +++ LC    +E +  ++  M  +G  P++ +++ L+  +    R
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 266

Query: 251 THEASDLWNRMIREGFLPNV-----VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             EA +L + M   G  PNV     V ++ LI G C  G+ ++A ++  +M   +  P+V
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 326

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T+ ALIDG  KAG +  A  I + M + G  PNVV Y  +V  LC++    +A   +E+
Sbjct: 327 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 386

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M    C P+++T+ + +  LC   R D A++L+ ++K +   P+  TYN L+DGL +  +
Sbjct: 387 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGK 446

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            ++A  ++ E+   G Q +  T+     G+ R+G +    +LL  +L +G   DA T + 
Sbjct: 447 TEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSS 506

Query: 486 IIYAYCKQGKVNN 498
           I+   C+ GK+++
Sbjct: 507 ILDWVCRSGKLDD 519



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 147/298 (49%), Gaps = 10/298 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI-- 67
           +++    +++ M  +GV+     +  +++++ +    ++AL++ + +   G  P V +  
Sbjct: 231 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPD 290

Query: 68  ---YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              +N ++        F   + ++  M    ++P+V T+  L+  LCK  +V+ A  +L 
Sbjct: 291 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD 350

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEH 179
            MGN G  P+ V+Y  +V  +CK G++EEA +      S   V     Y +L+  LC+  
Sbjct: 351 LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRAS 410

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           + ++A  L+ E+   G DP+ +TY+ ++  L   G  E ++ +L +M  +G  P+  +F 
Sbjct: 411 RTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFA 470

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +   G    G      +L   ++ +G LP+    S+++  +C +G +D+  ++  + E
Sbjct: 471 ACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 172/588 (29%), Positives = 304/588 (51%), Gaps = 18/588 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCS--EGVFISVINSYRRVGLAEQALKMFYRIRE 58
           +++KLG   E + ++ LL +M+ E V+ +  EG +I  + +Y R G  ++A+  F R+  
Sbjct: 46  IVQKLGHHGEFEEMEKLLSEMR-ENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDF 104

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           +   P+V  +N I++ L+     +  + +Y  M+  G++ +V+TY I +K+ CK  R   
Sbjct: 105 YNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYA 164

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALIN 173
           A +LL  M   GC  +AV+Y T+V+ +   G+ + ARE     LA      V  +N L++
Sbjct: 165 ALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVH 224

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG---------ILG 224
            LCK+  + E+  LL +++ RG+ PN+ T++  +  LC  G ++ ++           L 
Sbjct: 225 VLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLR 284

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M   G  P+  ++ S++ GY   G   +A+ +    + +GF P+   Y +LI+G C +G
Sbjct: 285 KMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDG 344

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
             D A++V          P++  Y+ LI G ++ G +L A Q+ N M  NGC PN+  Y 
Sbjct: 345 DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYN 404

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC+      A  L++    + CPP+  T+NT I G C   ++D A +++++M   
Sbjct: 405 LVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQ 464

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P++ TYN LL+GL +  + +E  E+   +E+ G   NI+TYN I+  +C+A  V EA
Sbjct: 465 GMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEA 524

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             LLG+M  +G K D ++F  +   +CK G ++ A QL  R+    +      +Y  ++ 
Sbjct: 525 VDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVS 584

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
                  M  A      M N G  P+  T+ V++   F  +G++   Y
Sbjct: 585 AFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDG-FCKMGNITQGY 631



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 155/578 (26%), Positives = 253/578 (43%), Gaps = 88/578 (15%)

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM--------------------GN 128
           S    DG +    TY  +++ L  +   +   KLL EM                    G 
Sbjct: 29  SAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGR 88

Query: 129 KG----------------CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSV 167
           KG                C P   S+  I++ + + G   +A ++ MR       S V  
Sbjct: 89  KGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYT 148

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y   I   CK  +   A  LL  M + G D N + Y T+++ L D G  + +  +  +M 
Sbjct: 149 YTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEML 208

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            R   P++ +F  L+      G   E+  L  ++++ G  PN+  ++  + GLC  G++D
Sbjct: 209 ARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALD 268

Query: 288 EAVSVSYQME------------------------ENSC--------------------PP 303
            AV  S  +E                        +  C                     P
Sbjct: 269 RAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKP 328

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY +LI+GF K G+   A  ++   +  G  P++V Y  ++K L Q  +   A  L+
Sbjct: 329 DEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLM 388

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +MA   C PN  T+N  I GLC  G V  A  L+D      C P+I TYN L+DG  + 
Sbjct: 389 NEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQ 448

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            ++  A E+V  +   G+  +++TYNT+L+G+C+AG   E  ++   M  +G   + IT+
Sbjct: 449 LKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITY 508

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           NII+ + CK  KVN A+ LL  ++  G   PD++S+ +L  G C  G +  A+   ++M 
Sbjct: 509 NIIVDSLCKAKKVNEAVDLLGEMKSKG-LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRME 567

Query: 544 NE-GICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            +  +C   AT+N++V S FS   ++     L  +M N
Sbjct: 568 KQYDVCHTTATYNIIV-SAFSEQLNMNMAMKLFSVMKN 604



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 229/482 (47%), Gaps = 17/482 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E D  + L  +M    +      F  +++   + GL  ++ ++  ++ + G+ P +  +N
Sbjct: 196 EHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFN 255

Query: 70  ---------HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                      LD  +  +R          M   G EP+  TYN ++   CK   V  A 
Sbjct: 256 IFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDAN 315

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           ++L +   KG  PD  +Y ++++  CK G  + A       L       + +YN LI GL
Sbjct: 316 RVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGL 375

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            ++  I  A  L+ EM + G  PN+ TY+ +I+ LC +G V  +  ++     +GC P+I
Sbjct: 376 SQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDI 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ GY    +   A+++ NRM  +G  P+V+ Y+TL++GLC  G  +E + +   
Sbjct: 436 FTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKA 495

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE  C PN+ TY+ ++D   KA  +  A  +   M S G  P+VV++  +    C+   
Sbjct: 496 MEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGD 555

Query: 356 FHQAHSLIEKM--AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              A+ L  +M   ++ C   T T+N  +        ++ AMKL   MK   C P+  TY
Sbjct: 556 IDGAYQLFRRMEKQYDVCH-TTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTY 614

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             ++DG  ++  + + ++ + E  +     ++ T+  +L+ +C    V EA  ++  ML 
Sbjct: 615 RVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQ 674

Query: 474 EG 475
           +G
Sbjct: 675 KG 676



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 8/252 (3%)

Query: 28  CSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           C   +F   ++I+ Y +    + A +M  R+   G+ P V  YN +L+ L    +   + 
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            I+  M+  G  PN+ TYNI++ +LCK  +V+ A  LL EM +KG  PD VS+ T+ +  
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550

Query: 146 CKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           CK+G ++ A +L  R      V      YN +++   ++  +  A  L   M + G DP+
Sbjct: 551 CKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPD 610

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY  +I   C +GN+      L +   +   P++ +F  +L    +  + HEA  + +
Sbjct: 611 NYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIH 670

Query: 260 RMIREGFLPNVV 271
            M+++G +P  V
Sbjct: 671 LMLQKGIVPETV 682


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 164/488 (33%), Positives = 262/488 (53%), Gaps = 17/488 (3%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++  L    R          M   G  P+V+TY  ++ ALC  NR+  A K L EM 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG----VSVYNALINGLCKEHKIEE 183
           N+   P+ V+YT ++  +CK G+V+EA  L  +           YN+LI+GLCK  +  E
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASE 133

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A+ LL EMV  G  P++ TY+T+I+  C     + +L +  Q+  RG  P++ +++ L+ 
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 244 GYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           G    GR  EA DL+ RMI+ G  +PN V Y++LI G C  G MDEA+++  +M E    
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V TY+ L++GF K   L  A  + N+M   G +P+VV +T ++  LC+ N    A  +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M  ++C P   T+NT + G C   +++ A K +  +++ +C PN+ ++N ++ GL +
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCK 371

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE-GTKLDAI 481
           VNR  EA ELV E  +     ++V Y T++ G+CR   V EA ++  KML E G   ++I
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYL 539
           T++ +I   C  G       +LDR RG  E    P+I +Y  L+     +   ++A   L
Sbjct: 432 TYSTLITGLCNAG-------MLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELL 484

Query: 540 QKMLNEGI 547
             M+  G 
Sbjct: 485 DDMVQRGF 492



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/496 (33%), Positives = 262/496 (52%), Gaps = 20/496 (4%)

Query: 27  SCSEG--VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           SCS     + S+I    +V   EQAL    ++   G  P V  Y  ++ AL  ENR    
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                 M    + PNV TY +L+  LCK  RVD A  LL +M  K C P AV+Y +++S 
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISG 124

Query: 145 ICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK  +  EA +L   M +      +  Y  LI G CK  K ++A  +  ++V RG  P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           V+TYS +I  LC  G ++ ++ + G+M   G C PN  ++ SL+ G+   G+  EA +L 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            RM   G  P+VV Y+TL++G C    +D+A  +  QM      P+V T+++L+DG  + 
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS-LIEKMAFENCPPNTVT 377
             L  A  I   M    CSP V  Y  ++   C+ N   +A   ++E+M   +CPPN V+
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVS 361

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE-I 436
           FN  I+GLC   R   AM+L+++ ++  C P++  Y  ++DGL R  +V EA  +  + +
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ G   N +TY+T++ G+C AGM+  A   + K    G   +  T+N++I A+ K  + 
Sbjct: 422 EEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRD 477

Query: 497 NNAIQLLDRI--RGGG 510
            +A +LLD +  RG G
Sbjct: 478 EDARELLDDMVQRGFG 493



 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 153/486 (31%), Positives = 268/486 (55%), Gaps = 13/486 (2%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR--- 155
           +  TY  L++ LCK  R++ A   L +M +KG  PD  +YT ++ ++C   ++ EAR   
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 156 -ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            E+A R     V  Y  LI+GLCK  +++EA  LL +M  + + P  +TY+++IS LC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
                +  +L +M   GC P+I ++T+L+ G+    ++ +A  ++ +++  GF P+VV Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 274 STLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           S LI GLC  G + EA+ +  +M +  SC PN  TY++LI GF + G +  A  +  RM 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G SP+VV YT ++   C+      A+ L+ +M  +   P+ VTF + + GLC   R+ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+ +L +M++  C P + TYN +LDG  R N+++EA + + E   C    N+V++N ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPNVVSFNIMI 366

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+     EA +L+ +        D + +  +I   C++ KV+ A ++  ++      
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P+ I+Y++L+ G+CN+G +  A  Y++K    G  PN  T+N+L+ +            
Sbjct: 427 LPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 573 ILDDIM 578
           +LDD++
Sbjct: 483 LLDDMV 488



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/443 (33%), Positives = 246/443 (55%), Gaps = 11/443 (2%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHK 180
           +    C+ D V+YT+++  +CK+ ++E+A     + ++  F   V  Y A+I+ LC E++
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           + EA   L EM +R + PNV+TY+ +I  LC  G V+ ++ +L +M  + C P   ++ S
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNS 120

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G     R  EA DL   M+  G +P++  Y+TLI G C +   D+A+ V  Q+    
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQA 359
             P+V TYS LIDG  K G L  A  ++ RMI +G C PN V Y  ++   C+     +A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            +L+E+MA     P+ VT+ T + G C   R+D A  LL+QM +    P++ T+  L+DG
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L R NR+ +A  ++ E+ +      + TYNTIL G CRA  + EA + + + +      +
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPN 358

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            ++FNI+I   CK  + + A++L++  R     NPD++ YT+++ G+C    + EA    
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEAR-RRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417

Query: 540 QKMLNEGIC-PNFATWNVLVRSL 561
           +KML E  C PN  T++ L+  L
Sbjct: 418 RKMLEEPGCLPNSITYSTLITGL 440



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 230/435 (52%), Gaps = 14/435 (3%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            +  L++M    ++ +   +  +I+   + G  ++A+ +  ++R+  + PT   YN ++ 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    R S    +   M   G  P++FTY  L+   CK+ + D A ++  ++  +G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVS------VYNALINGLCKEHKIEEAFWL 187
           D V+Y+ ++  +CK G+++EA +L  R     S       YN+LI+G C+  K++EA  L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L  M + G  P+V+TY+T+++  C +  ++ +  +L QM  +G  P++ +FTSL+ G   
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             R  +A  +   M R+   P V  Y+T++ G C    ++EA    + +EE  CPPNV +
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMDCPPNVVS 361

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ +I G  K      A ++        C+P+VV YT ++  LC+     +A  +  KM 
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 368 FE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
            E  C PN++T++T I GLC  G +D A   +++     C+PNI TYN L+D   + NR 
Sbjct: 422 EEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRD 477

Query: 427 KEAFELVTEIEKCGI 441
           ++A EL+ ++ + G 
Sbjct: 478 EDARELLDDMVQRGF 492



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 153/283 (54%), Gaps = 2/283 (0%)

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           NSC  +  TY++LI G  K   L  A     +M+S G  P+V  YT ++  LC  N  H+
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A   +E+MA  N  PN VT+   I GLC  GRVD A+ LL +M++ +C+P   TYN L+ 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLIS 123

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL +  R  EA++L+ E+   G   +I TY T++ G C++    +A ++  +++  G + 
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D +T++ +I   CK+G++  AI L  R+   G   P+ ++Y SL+ G C  G M EA   
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           L++M   G  P+  T+  L+   F  L  L   Y L + M  K
Sbjct: 244 LERMAETGSSPDVVTYTTLMNG-FCKLARLDDAYDLLNQMTRK 285



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 136/248 (54%), Gaps = 4/248 (1%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           +N CS + V YT +++ LC+     QA   + KM  +   P+  T+   I  LC   R+ 
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A K L++M      PN+ TY  L+DGL +  RV EA  L++++ K  +    VTYN+++
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLI 122

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+A    EA+ LL +M+  G   D  T+  +I  +CK  K ++A+++ +++   G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG-F 181

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSLFSNLGHLGPV 571
            PD+++Y+ L+ G+C  G ++EA     +M+  G C PN  T+N L+ S F  +G +   
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI-SGFCRMGKMDEA 240

Query: 572 YILDDIMA 579
             L + MA
Sbjct: 241 MNLLERMA 248



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 140/263 (53%), Gaps = 12/263 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL++M   G S     + +++N + ++   + A  +  ++   GL P V  + 
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L  ENR S    I   M+R    P V+TYN +L   C+ N+++ A K ++E    
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EM 353

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEA 184
            C P+ VS+  ++  +CK+ +  EA EL       R    V +Y  +I+GLC+E K++EA
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413

Query: 185 FWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
             +  +M++  G  PN ITYST+I+ LC+ G ++ + G +     +GC PNI ++  L+ 
Sbjct: 414 CRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLID 469

Query: 244 GYLLGGRTHEASDLWNRMIREGF 266
            +    R  +A +L + M++ GF
Sbjct: 470 AFRKANRDEDARELLDDMVQRGF 492


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  292 bits (747), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 178/619 (28%), Positives = 315/619 (50%), Gaps = 59/619 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L E   +D   +  QQ+ + G +     + ++++   + G  E A  +   + E  
Sbjct: 147 LLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESF 206

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PTV  +   +D L      +     + +M + G+ PN  TY+ L+  LCK  ++D A 
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIAL 266

Query: 121 KLLVEMGNKG-----------------------------CAPDAVSYTTIVSSICKLGQV 151
            LL +  ++                              C P+ V + ++++ +C+  +V
Sbjct: 267 GLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRV 326

Query: 152 EEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR--GIDPNVITYS 204
           +EA EL   M+     + V  YN L+ GLCK  +I EA+  + E++ R  G  PNV+T+S
Sbjct: 327 DEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHV-ELMRRTEGCSPNVVTFS 385

Query: 205 TIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI- 262
           T+I  LC+ G V  +  +  +M  V G +PN  ++  LL+G    G +      + +M+ 
Sbjct: 386 TLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445

Query: 263 RE--------------GFL------PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           RE               FL      P +V Y+TL+ GL  +G + +A+ +   M E+   
Sbjct: 446 REWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V T+++++DG  K   +L A  ++ R +  GC PNVV Y+ ++  L +     +A  L
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + KM    C  NTVT++T + GL   GR++ A+ +L QM+   CLP+  TYN L+DG  +
Sbjct: 566 LAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFK 625

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R++EA  L+ E+ + G   ++VTY T+ HG+CR+G   EA ++L  M   G   +AIT
Sbjct: 626 RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 685

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           ++ I+   CK G+V  A+   +++       P +I+Y++L+ G+C +G + EA+ +L++M
Sbjct: 686 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745

Query: 543 LNEGICPNFATWNVLVRSL 561
           +  G  P+  T+++L+  L
Sbjct: 746 IRAGRIPDVVTFSILINGL 764



 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 167/538 (31%), Positives = 271/538 (50%), Gaps = 12/538 (2%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            +++    + G+   AL +   + E GL P V  +N +LD L  E R    + ++      
Sbjct: 478  TLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 537

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            G  PNV TY+ L+  L K  ++D A +LL +M   GC  + V+Y+T+V  + K+G++E+A
Sbjct: 538  GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 597

Query: 155  RELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
              +  +            YN LI+G  K  ++ EA  LL EM++ G  P+V+TY+T+   
Sbjct: 598  VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 657

Query: 210  LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL-P 268
            LC  G  + ++ IL  M  RGC PN  +++S++ G    GR  EA   + +M R+  + P
Sbjct: 658  LCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAP 717

Query: 269  NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
            +V+AYS LI GLC  G +DEA     +M      P+V T+S LI+G   AG +    +++
Sbjct: 718  HVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELF 777

Query: 329  NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
              M   GC  ++ AY  M+   C    F  A++L+E+M       NTVT    IK LCG 
Sbjct: 778  CGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGN 837

Query: 389  GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
             R+D A+     + + +C   I+ YN L+  L+   R ++A EL+  +   G   +   Y
Sbjct: 838  DRIDEAVSYFHSIPE-DCRDEIS-YNTLITSLVASRRSEQALELLRAMVADGGSPDACNY 895

Query: 449  NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             T++ G+ +AG    A +LL +M   G   D  T+ I+I    K  ++  A    + +  
Sbjct: 896  MTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLR 955

Query: 509  GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
                 PD I Y+SL+   C +  + +A+  L+   + GI P    ++ +V SL  N G
Sbjct: 956  KN-LKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRG 1009



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/582 (28%), Positives = 292/582 (50%), Gaps = 36/582 (6%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + +Q L     V  V C    F S++N   +    ++A ++F  ++E G    V  YN +
Sbjct: 296 EAIQLLKAMPCVPNVVC----FNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNIL 351

Query: 72  LDALLAENRFSMINPIYSNMKR-DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNK 129
           L  L    R          M+R +G  PNV T++ L++ LC   RV+ A+++   M   +
Sbjct: 352 LKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVE 411

Query: 130 GCAPDAVSYTTIVSSICKLGQ-------VEEARELAMRFGSG------------------ 164
           G +P+  +Y  ++  +CK G         E+  E   R  S                   
Sbjct: 412 GISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRP 471

Query: 165 -VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            +  YN L+ GL K   + +A  LL  M++ G+ P+VIT+++++  LC    +  +  + 
Sbjct: 472 TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 531

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +   RGC PN+ ++++L+ G     +  EA  L  +M+  G   N V YST++ GL   
Sbjct: 532 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKV 591

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G M++AV V  QM +  C P+  TY+ LIDGF K   L  A  +   M+  G  P+VV Y
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T +   LC++  F +A  +++ MA   C PN +T+++ + GLC  GRV  A+   ++M +
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711

Query: 404 YECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
            E + P++  Y+ L+DGL +  R+ EA+E +  + + G   ++VT++ +++G+C AG + 
Sbjct: 712 DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
              +L   M   G K D   +N +I AYC +G+ + A  LL+ ++  G    + +++  +
Sbjct: 772 TGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG-IAKNTVTHGIV 830

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +  +C +  + EA  Y   +  +  C +  ++N L+ SL ++
Sbjct: 831 IKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVAS 870



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 160/524 (30%), Positives = 272/524 (51%), Gaps = 39/524 (7%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN +++ L    R       +    + G  P V TY+ ++  LC++N VD   KLL EM 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIE 182
            +GCAP+AV+Y T+V+++   G+ +EA  L  R  +      +  +  +I GLCKE +IE
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            AF ++ EMVDRG  P+V  ++ ++ +LC++G V+ +     Q+ + G  P+  ++ +++
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183

Query: 243 KGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
            G    GR  EA+ +  +++ E F  P V  ++  + GL   G++  A      M +   
Sbjct: 184 DGLYKAGRL-EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  TY ALIDG  KAG L  A  +     S      + A++ ++  LCQ +   +A  
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L++ M    C PN V FN+ + GLC   RVD A +L D MK+  C  ++ TYN LL GL 
Sbjct: 300 LLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLC 356

Query: 422 RVNRVKEAF---ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTK 477
           ++ R+ EA+   EL+   E C    N+VT++T++ G+C AG V +A+++  +M+ +EG  
Sbjct: 357 KLRRIPEAYRHVELMRRTEGC--SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRI-----RGGGEW---------------NPDII 517
            +  T+  ++   CK G      Q  +++     R    W                P ++
Sbjct: 415 PNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLV 474

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Y +L+ G+  SG +++A   L+ M+  G+ P+  T+N ++  L
Sbjct: 475 TYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGL 518



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 168/568 (29%), Positives = 278/568 (48%), Gaps = 31/568 (5%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF-GLKPTVKIYNHILDALLA--- 77
           + EG S +   F ++I      G   QA +++ R+    G+ P    Y  +L+ L     
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432

Query: 78  --------------ENRFSMINPIYSNMKRDGM----EPNVFTYNILLKALCKNNRVDGA 119
                         E R S   PI+S      M     P + TYN L+  L K+  V  A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALING 174
             LL  M   G +PD +++ +++  +CK  ++ +A     R L       V  Y+ LI+G
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K  K++EA  LL +MV+ G   N +TYST++  L  VG +E ++ +L QM   GC P+
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++ +L+ G+    R  EA  L   M+  GF P+VV Y+TL HGLC +G  DEAV +  
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 672

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC-SPNVVAYTCMVKVLCQN 353
            M    C PN  TYS+++DG  KAG +  A   + +M  +   +P+V+AY+ ++  LC+ 
Sbjct: 673 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKA 732

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A+  +E+M      P+ VTF+  I GLC  GR+D  ++L   M +  C  +I  Y
Sbjct: 733 GRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAY 792

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N +++          A+ L+ E++  GI  N VT+  ++  +C    + EA        I
Sbjct: 793 NAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS--I 850

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
                D I++N +I +     +   A++LL  +   G  +PD  +Y +++ G+  +G  +
Sbjct: 851 PEDCRDEISYNTLITSLVASRRSEQALELLRAMVADG-GSPDACNYMTVMDGLFKAGSPE 909

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            A   LQ+M + G  P+  T+ +++  L
Sbjct: 910 VAAKLLQEMRSRGHSPDLRTYTIMISGL 937



 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 168/584 (28%), Positives = 291/584 (49%), Gaps = 58/584 (9%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN   + G    A   F +  +FG +PTV  Y+ ++D L  +N       +   M   G
Sbjct: 7   LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
             PN  TYN L+ AL    R   A+ LL  M   GC P+ +++  I+  +CK G++E A 
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126

Query: 155 ---RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
               E+  R F   V ++  L++ LC+  +++EA++   +++  G  P+ +TY+T++  L
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
              G +E +  +L  +     +P + +FT  + G    G    A + ++ M + G  PN 
Sbjct: 187 YKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246

Query: 271 VAYSTLIHGLCSNGSMDEAVSV----------------------SYQMEEN-------SC 301
           V Y  LI GLC  G +D A+ +                      ++++EE         C
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC 306

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV  +++L++G  +A  +  A ++++ M  +GCS +V+ Y  ++K LC+     +A+ 
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYR 366

Query: 362 LIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL-PNITTYNELLDG 419
            +E M   E C PN VTF+T I+GLC  GRV+ A ++ ++M   E + PN  TY  LL+G
Sbjct: 367 HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEG 426

Query: 420 LLRV---NRVKEAFELV---------------TEIEKCGIQL---NIVTYNTILHGVCRA 458
           L +     R+++ FE +                E++   +Q+    +VTYNT++ G+ ++
Sbjct: 427 LCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKS 486

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           GMV +A  LL  M+  G   D ITFN ++   CK+ ++ +A  +  R    G   P++++
Sbjct: 487 GMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG-CRPNVVT 545

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           Y++L+ G+     M EA   L KM+  G   N  T++ +V  L 
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 293/592 (49%), Gaps = 35/592 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    E+D    LL++M   G + +   + +++N+    G A++A  +  R+   G
Sbjct: 42  VIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANG 101

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +  I+  L  E        +   M   G  P+V  + +LL ALC+  RVD A+
Sbjct: 102 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAW 161

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGS-GVSVYNALINGL 175
               ++   G  PDAV+Y T+V  + K G++E A    + LA  F S  V  +   ++GL
Sbjct: 162 FFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL 221

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   +  A+     M   G+ PN +TY  +I  LC  G ++ +LG+L     +     +
Sbjct: 222 SKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGM 278

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F+SLL G     R  EA  L   M     +PNVV +++L++GLC    +DEA  +   
Sbjct: 279 FAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDV 335

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM-ISNGCSPNVVAYTCMVKVLCQNN 354
           M+E+ C  +V TY+ L+ G  K   +  A +    M  + GCSPNVV ++ +++ LC   
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395

Query: 355 MFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-------- 405
             +QA  + E+M A E   PN  T+   ++GLC  G      +  +QM + E        
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP 455

Query: 406 -------------CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                        C P + TYN L+ GL +   V++A  L+  + + G+  +++T+N++L
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+   +++A  +  + L  G + + +T++ +I    K  K++ A+QLL ++   G  
Sbjct: 516 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG-C 574

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             + ++Y++++ G+   G M++A + L++M + G  P+  T+N L+   F  
Sbjct: 575 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 626



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 259/513 (50%), Gaps = 11/513 (2%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ L +  ++D    LL +M   G   +   + +V++   +VG  E A+ +  ++R+ G
Sbjct: 549  LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 608

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P    YN ++D      R      +   M   G  P+V TY  L   LC++ R D A 
Sbjct: 609  CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV 668

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR--FGSGVSVYNALING 174
            ++L  M  +GCAP+A++Y++IV  +CK G+V EA     ++A        V  Y+ALI+G
Sbjct: 669  EILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDG 728

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            LCK  +I+EA+  L  M+  G  P+V+T+S +I+ LCD G ++T L +   M  RGC  +
Sbjct: 729  LCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKAD 788

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            I+++ +++  Y L G    A  L   M   G   N V +  +I  LC N  +DEAVS  +
Sbjct: 789  IYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFH 848

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             + E+ C   + +Y+ LI     +     A ++   M+++G SP+   Y  ++  L +  
Sbjct: 849  SIPED-CRDEI-SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAG 906

Query: 355  MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
                A  L+++M      P+  T+   I GL    ++  A    ++M +    P+   Y+
Sbjct: 907  SPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYS 966

Query: 415  ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             L+D   + ++V +A++L   +   GI+  I  Y+T++  +C+     +A +++ +M  +
Sbjct: 967  SLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK 1023

Query: 475  GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
              +     +  +  AY  +G+V+ A++L++ ++
Sbjct: 1024 NCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 238/433 (54%), Gaps = 14/433 (3%)

Query: 136 VSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           V+Y  +++ +CK G+V +A     + +   F   V  Y+ +I+GLC+++++++   LL E
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M  RG  PN +TY+T++++L   G  + +  +L +M   GC P + +F  ++KG    G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A  + + M+  GF+P+V  ++ L+H LC  G +DEA     Q+      P+  TY+ 
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++DG  KAG L  A  +   +  +  SP V  +T  V  L +      A+   + M    
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
             PNTVT++  I GLC  G++D A+ LL D+  Q      +  ++ LL GL + +R++EA
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ----AGMFAFSSLLHGLCQAHRLEEA 297

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            +L+  +       N+V +N++++G+C+A  V EAF+L   M   G   D IT+NI++  
Sbjct: 298 IQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKG 354

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN-EGIC 548
            CK  ++  A + ++ +R     +P+++++++L+ G+CN+G + +A+   ++M+  EGI 
Sbjct: 355 LCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414

Query: 549 PNFATWNVLVRSL 561
           PN  T+  L+  L
Sbjct: 415 PNRFTYAFLLEGL 427


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 164/535 (30%), Positives = 277/535 (51%), Gaps = 31/535 (5%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  FYR+     +P+V  +   L ++  + ++S +  + + M   G+  NV++ NIL
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +  LC+ N V  A  +L +M   G  PDA+++                            
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDAITF---------------------------- 165

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
             N LING C E +I+EA  L  EMV RG  P+VI+YST+I+ LC  GN   +L +L +M
Sbjct: 166 --NTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             +GC PN+ ++T+++         ++A DL + M+  G  P+VV YST++HG CS G +
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA  +  +M   +  PN  T++ L+DG  K G +  A  ++  M   G  PN   Y  +
Sbjct: 284 NEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNAL 343

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C NN   +A  +++ M  + C P   ++N  I G C   R+D A  LL +M + E 
Sbjct: 344 MDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKEL 403

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+  TY+ L+ GL +V R +EA  L  E+   G+  +++TY+T+L G+C+ G + EA +
Sbjct: 404 TPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALK 463

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL  M     + D + +NI+I      GK+  A +L  ++   G   P I +YT ++ G+
Sbjct: 464 LLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG-IQPTIRTYTIMIKGL 522

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
              G   EA+   +KM ++G  PN  ++NV+++    N      + ++D+++  +
Sbjct: 523 LKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/488 (27%), Positives = 248/488 (50%), Gaps = 5/488 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           + +K +   V  L  QM + GV+ +      +IN   R+     A+ +  ++ + G++P 
Sbjct: 102 IAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPD 161

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              +N +++    E        +++ M R G +P+V +Y+ ++  LCK+     A +LL 
Sbjct: 162 AITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLR 221

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEH 179
           +M  KGC P+ V+YTTI+ S+CK   V +A +L            V  Y+ +++G C   
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            + EA  L  EMV R + PN +T++ ++  LC  G V  +  +   M  +G  PN +++ 
Sbjct: 282 HLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYN 341

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+ GY L  +  EA  + + M+ +G  P V +Y+ LI+G C    +DEA S+  +M E 
Sbjct: 342 ALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEK 401

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P+  TYS L+ G  + G    A  ++  M S+G  P+++ Y+ ++  LC++    +A
Sbjct: 402 ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA 461

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L++ M      P+ V +N  I+G+   G+++ A +L  ++      P I TY  ++ G
Sbjct: 462 LKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKG 521

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           LL+     EA+EL  ++E  G   N  +YN I+ G  +      A +L+ +M+ +    D
Sbjct: 522 LLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSAD 581

Query: 480 AITFNIII 487
           + TF +++
Sbjct: 582 SSTFQMLL 589



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 212/391 (54%), Gaps = 5/391 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + +VIN   + G    AL++  ++ E G KP +  Y  I+D+L  +   +    + S M 
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G+ P+V TY+ +L   C    ++ A  L  EM  +   P+ V++T +V  +CK G V 
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319

Query: 153 EAR---ELAMRFGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EAR   E   + G+      YNAL++G C  ++++EA  +L  MVD+G  P V +Y+ +I
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C    ++ +  +L +M  +   P+  ++++L++G    GR  EA +L+  M   G L
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+++ YSTL+ GLC +G +DEA+ +   M+E+   P++  Y+ LI+G   AG L  A ++
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++++ ++G  P +  YT M+K L +  +  +A+ L  KM  +   PN+ ++N  I+G   
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
                 A++L+D+M       + +T+  LLD
Sbjct: 560 NQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 180/354 (50%), Gaps = 5/354 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++    LL +M   G+      + ++++ +  +G   +A  +F  +    
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    +  ++D L  E   S    ++  M + G EPN +TYN L+   C NN++D A 
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQ 357

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           K+L  M +KGCAP   SY  +++  CK  +++EA+ L +             Y+ L+ GL
Sbjct: 358 KVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGL 417

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  + +EA  L  EM   G+ P+++TYST++  LC  G+++ +L +L  M      P+I
Sbjct: 418 CQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDI 477

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  L++G  + G+   A +L++++  +G  P +  Y+ +I GL   G  DEA  +  +
Sbjct: 478 VLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRK 537

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           ME++   PN  +Y+ +I GF +  +   A ++ + M+    S +   +  ++ +
Sbjct: 538 MEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDL 591


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  291 bits (746), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 163/488 (33%), Positives = 262/488 (53%), Gaps = 17/488 (3%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++  L    R          M   G  P+V+TY  ++ ALC  NR+  A K L EM 
Sbjct: 14  YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG----VSVYNALINGLCKEHKIEE 183
           N+   P+ V+YT ++  +CK G+V+EA  L  +           YN+LI+GLCK  +  E
Sbjct: 74  NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASE 133

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A+ LL EMV  G  P++ TY+T+I+  C     + +L +  Q+  RG  P++ +++ L+ 
Sbjct: 134 AYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLID 193

Query: 244 GYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           G    GR  EA DL+ RMI+ G  +PN V Y++LI G C  G MDEA+++  +M E    
Sbjct: 194 GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS 253

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V TY+ L++GF K   L  A  + N+M   G +P+VV +T ++  LC+ N    A  +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M  ++C P   T+NT + G C   +++ A K +  +++ +C PN+ ++N ++ GL +
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCK 371

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE-GTKLDAI 481
           VNR  EA ELV E  +     ++V Y T++ G+CR   V EA ++  KML E G   ++I
Sbjct: 372 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSI 431

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYL 539
           T++ ++   C  G       +LDR RG  E    P+I +Y  L+     +   ++A   L
Sbjct: 432 TYSTLVTGLCNAG-------MLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELL 484

Query: 540 QKMLNEGI 547
             M+  G 
Sbjct: 485 DDMVQRGF 492



 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/496 (33%), Positives = 262/496 (52%), Gaps = 20/496 (4%)

Query: 27  SCSEG--VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           SCS     + S+I    +V   EQAL    ++   G  P V  Y  ++ AL  ENR    
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                 M    + PNV TY +L+  LCK  RVD A  LL +M  K C P AV+Y +++S 
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISG 124

Query: 145 ICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK  +  EA +L   M +      +  Y  LI G CK  K ++A  +  ++V RG  P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           V+TYS +I  LC  G ++ ++ + G+M   G C PN  ++ SL+ G+   G+  EA +L 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            RM   G  P+VV Y+TL++G C    +D+A  +  QM      P+V T+++L+DG  + 
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS-LIEKMAFENCPPNTVT 377
             L  A  I   M    CSP V  Y  ++   C+ N   +A   ++E+M   +CPPN V+
Sbjct: 305 NRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCPPNVVS 361

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE-I 436
           FN  I+GLC   R   AM+L+++ ++  C P++  Y  ++DGL R  +V EA  +  + +
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ G   N +TY+T++ G+C AGM+  A   + K    G   +  T+N++I A+ K  + 
Sbjct: 422 EEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRD 477

Query: 497 NNAIQLLDRI--RGGG 510
            +A +LLD +  RG G
Sbjct: 478 EDARELLDDMVQRGFG 493



 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 153/486 (31%), Positives = 268/486 (55%), Gaps = 13/486 (2%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR--- 155
           +  TY  L++ LCK  R++ A   L +M +KG  PD  +YT ++ ++C   ++ EAR   
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 156 -ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            E+A R     V  Y  LI+GLCK  +++EA  LL +M  + + P  +TY+++IS LC  
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
                +  +L +M   GC P+I ++T+L+ G+    ++ +A  ++ +++  GF P+VV Y
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 274 STLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           S LI GLC  G + EA+ +  +M +  SC PN  TY++LI GF + G +  A  +  RM 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G SP+VV YT ++   C+      A+ L+ +M  +   P+ VTF + + GLC   R+ 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+ +L +M++  C P + TYN +LDG  R N+++EA + + E   C    N+V++N ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPNVVSFNIMI 366

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+     EA +L+ +        D + +  +I   C++ KV+ A ++  ++      
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P+ I+Y++L+ G+CN+G +  A  Y++K    G  PN  T+N+L+ +            
Sbjct: 427 LPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARE 482

Query: 573 ILDDIM 578
           +LDD++
Sbjct: 483 LLDDMV 488



 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 151/443 (34%), Positives = 246/443 (55%), Gaps = 11/443 (2%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHK 180
           +    C+ D V+YT+++  +CK+ ++E+A     + ++  F   V  Y A+I+ LC E++
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           + EA   L EM +R + PNV+TY+ +I  LC  G V+ ++ +L +M  + C P   ++ S
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNS 120

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G     R  EA DL   M+  G +P++  Y+TLI G C +   D+A+ V  Q+    
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQA 359
             P+V TYS LIDG  K G L  A  ++ RMI +G C PN V Y  ++   C+     +A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            +L+E+MA     P+ VT+ T + G C   R+D A  LL+QM +    P++ T+  L+DG
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDG 300

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L R NR+ +A  ++ E+ +      + TYNTIL G CRA  + EA + + + +      +
Sbjct: 301 LCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPN 358

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            ++FNI+I   CK  + + A++L++  R     NPD++ YT+++ G+C    + EA    
Sbjct: 359 VVSFNIMIRGLCKVNRSSEAMELVEEAR-RRRCNPDVVMYTTVIDGLCREKKVDEACRVY 417

Query: 540 QKMLNEGIC-PNFATWNVLVRSL 561
           +KML E  C PN  T++ LV  L
Sbjct: 418 RKMLEEPGCLPNSITYSTLVTGL 440



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 230/435 (52%), Gaps = 14/435 (3%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            +  L++M    ++ +   +  +I+   + G  ++A+ +  ++R+  + PT   YN ++ 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    R S    +   M   G  P++FTY  L+   CK+ + D A ++  ++  +G  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVS------VYNALINGLCKEHKIEEAFWL 187
           D V+Y+ ++  +CK G+++EA +L  R     S       YN+LI+G C+  K++EA  L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L  M + G  P+V+TY+T+++  C +  ++ +  +L QM  +G  P++ +FTSL+ G   
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCR 303

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             R  +A  +   M R+   P V  Y+T++ G C    ++EA    + +EE  CPPNV +
Sbjct: 304 ENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMDCPPNVVS 361

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ +I G  K      A ++        C+P+VV YT ++  LC+     +A  +  KM 
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKML 421

Query: 368 FE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
            E  C PN++T++T + GLC  G +D A   +++     C+PNI TYN L+D   + NR 
Sbjct: 422 EEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRD 477

Query: 427 KEAFELVTEIEKCGI 441
           ++A EL+ ++ + G 
Sbjct: 478 EDARELLDDMVQRGF 492



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 153/283 (54%), Gaps = 2/283 (0%)

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           NSC  +  TY++LI G  K   L  A     +M+S G  P+V  YT ++  LC  N  H+
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A   +E+MA  N  PN VT+   I GLC  GRVD A+ LL +M++ +C+P   TYN L+ 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLIS 123

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL +  R  EA++L+ E+   G   +I TY T++ G C++    +A ++  +++  G + 
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D +T++ +I   CK+G++  AI L  R+   G   P+ ++Y SL+ G C  G M EA   
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           L++M   G  P+  T+  L+   F  L  L   Y L + M  K
Sbjct: 244 LERMAETGSSPDVVTYTTLMNG-FCKLARLDDAYDLLNQMTRK 285



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 136/248 (54%), Gaps = 4/248 (1%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           +N CS + V YT +++ LC+     QA   + KM  +   P+  T+   I  LC   R+ 
Sbjct: 4   TNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLH 63

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A K L++M      PN+ TY  L+DGL +  RV EA  L++++ K  +    VTYN+++
Sbjct: 64  EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLI 122

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+A    EA+ LL +M+  G   D  T+  +I  +CK  K ++A+++ +++   G +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG-F 181

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSLFSNLGHLGPV 571
            PD+++Y+ L+ G+C  G ++EA     +M+  G C PN  T+N L+ S F  +G +   
Sbjct: 182 RPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI-SGFCRMGKMDEA 240

Query: 572 YILDDIMA 579
             L + MA
Sbjct: 241 MNLLERMA 248



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 140/263 (53%), Gaps = 12/263 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL++M   G S     + +++N + ++   + A  +  ++   GL P V  + 
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L  ENR S    I   M+R    P V+TYN +L   C+ N+++ A K ++E    
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EM 353

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEA 184
            C P+ VS+  ++  +CK+ +  EA EL       R    V +Y  +I+GLC+E K++EA
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEA 413

Query: 185 FWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
             +  +M++  G  PN ITYST+++ LC+ G ++ + G +     +GC PNI ++  L+ 
Sbjct: 414 CRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLID 469

Query: 244 GYLLGGRTHEASDLWNRMIREGF 266
            +    R  +A +L + M++ GF
Sbjct: 470 AFRKANRDEDARELLDDMVQRGF 492


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 170/522 (32%), Positives = 280/522 (53%), Gaps = 13/522 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R  LAE A ++  R    G  P V +   ++  L    R S    +    +R G   +VF
Sbjct: 56  RDDLAEAA-RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF 114

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---A 158
            YN L+   C+  ++D A +L+  M     APDA +YT I+  +C  G+V EA  L    
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 159 MRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +  G   SV  Y  L+  +CK     +A  +L EM  +G  PN++TY+ II+ +C  G V
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +   L ++   G  P+  S+T++LKG     R  +  +L+  M+ +  +PN V +  L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +   C  G ++ A+ V  QM  + C  N T  + +I+   K G +  A Q  N M S GC
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           SP+ ++YT ++K LC+   +  A  L+++M  +NCPPN VTFNTFI  LC  G ++ A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L++QM ++ C  NI TYN L++G     RV  A EL   +     + N +TY T+L G+C
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLC 468

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            A  +  A +LL +ML +    + +TFN+++  +C++G ++ AI+L++++   G   P++
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG-CTPNL 527

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I+Y +LL GI N    +EA   L  +++ G+ P+  T++ ++
Sbjct: 528 ITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 276/543 (50%), Gaps = 12/543 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + L+  M V   + +    I  +    RVG   +AL +   +   G +P+V  Y 
Sbjct: 128 QLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG---EALSLLDDMLHRGCQPSVVTYT 184

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+A+     F     +   M+  G  PN+ TYN+++  +C+  RVD A + L  + + 
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  PD VSYTT++  +C   + E+  EL               ++ L+   C+   +E A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M   G   N    + +I+++C  G V+ +   L  M   GC+P+  S+T++LKG
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  +A +L   M+R+   PN V ++T I  LC  G +++A  +  QM E+ C  N
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 424

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+AL++GF   G +  A +++  M    C PN + YT ++  LC       A  L+ 
Sbjct: 425 IVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLA 481

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  ++C PN VTFN  +   C  G +D A++L++QM ++ C PN+ TYN LLDG+    
Sbjct: 482 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDC 541

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             +EA EL+  +   G+  +IVTY++I+  + R   V EA ++   +   G +  A+ +N
Sbjct: 542 NSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 601

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            I+ A CK+   + AI     +   G   P+ ++Y +L+ G+ N   ++E    L+++ +
Sbjct: 602 KILLALCKRCNTDGAIDFFAYMVSNG-CMPNELTYITLIEGLANEDFLKETRDLLRELCS 660

Query: 545 EGI 547
            G+
Sbjct: 661 RGV 663



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 270/566 (47%), Gaps = 12/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +        +L+  +  G +     + +++  Y R G  + A ++   I    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMP 140

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  I+  L    R      +  +M   G +P+V TY +LL+A+CK+     A 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           ++L EM  KGC P+ V+Y  I++ +C+ G+V++ARE   R     F      Y  ++ GL
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + E+   L  EM+++   PN +T+  ++   C  G VE ++ +L QM   GC  N 
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                ++      GR  +A    N M   G  P+ ++Y+T++ GLC     ++A  +  +
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M   +CPPN  T++  I    + G +  A+ +  +M  +GC  N+V Y  +V   C    
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   M    C PNT+T+ T + GLC   R+D A +LL +M Q +C PN+ T+N 
Sbjct: 441 VDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+    +   + EA ELV ++ + G   N++TYNT+L G+       EA +LL  ++  G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D +T++ II    ++ +V  AI++   ++  G   P  + Y  +L  +C       A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG-MRPKAVIYNKILLALCKRCNTDGA 616

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
             +   M++ G  PN  T+  L+  L
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 33/366 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  + ++  +D     L  M   G S     + +V+    R    E A ++   +    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N  +  L  +        +   M   G E N+ TYN L+   C   RVD A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L   M    C P+ ++YTT+++                              GLC   +
Sbjct: 446 ELFYSM---PCKPNTITYTTLLT------------------------------GLCNAER 472

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++ A  LL EM+ +   PNV+T++ ++S  C  G ++ ++ ++ QM   GC PN+ ++ +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL G      + EA +L + ++  G  P++V YS++I  L     ++EA+ + + +++  
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P    Y+ ++    K  N  GA   +  M+SNGC PN + Y  +++ L   +   +  
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652

Query: 361 SLIEKM 366
            L+ ++
Sbjct: 653 DLLREL 658



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 4/168 (2%)

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +L+D+       P++    +L+  L R  R  +A  ++   E+ G  +++  YNT++ 
Sbjct: 62  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G CR G +  A +L+  M +     DA T+  II   C +G+V  A+ LLD +   G   
Sbjct: 122 GYCRYGQLDAARRLIASMPVAP---DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG-CQ 177

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P +++YT LL  +C S G  +A   L +M  +G  PN  T+NV++  +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 4/166 (2%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N  L  L+  + + EA  LV      G   ++     ++  +CR G   +A ++L     
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            GT +D   +N ++  YC+ G+++ A +L+  +       PD  +YT ++ G+C+ G + 
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVG 162

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           EA   L  ML+ G  P+  T+ VL+ ++  + G    + +LD++ A
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 61/130 (46%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ +   C  +    LL  +   GVS     + S+I    R    E+A+KMF+ +++ G
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P   IYN IL AL            ++ M  +G  PN  TY  L++ L   + +    
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652

Query: 121 KLLVEMGNKG 130
            LL E+ ++G
Sbjct: 653 DLLRELCSRG 662


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  291 bits (745), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 162/537 (30%), Positives = 284/537 (52%), Gaps = 7/537 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           G + +++NS  R GL ++  +++  + E  + P +  YN +++           N   S 
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSM 243

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +   G++P+ FTY  L+   C+   +D A+K+  EM  KGC  + V+YT ++  +C   +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR 303

Query: 151 VEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++EA +L ++         V  Y  LI  LC   +  EA  L+ EM ++GI PN+ TY+ 
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I SLC    +E +  +LGQM  +G  PN+ ++ +L+ GY   G   +A D+   M    
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN   Y+ LI G C   ++ +A+ V  +M E    P+V TY++LIDG  ++GN   A 
Sbjct: 424 LRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ + M   G  P+   YT M+  LC++    +A  L + +  ++  PN V +   I G 
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGY 542

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G+V+ A  +L++M    CLPN  T+N L+ GL    ++KEA  L  ++ K  +Q  +
Sbjct: 543 CKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTV 602

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            T   ++H + + G    A++   +ML  GTK DA T+   I  YC++G++ +A  ++ +
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAK 662

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++  G  +PD+ +Y+SL+ G  + G    AF+ L++M + G  P+  T+  L++ L 
Sbjct: 663 MKENG-VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLL 718



 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 275/571 (48%), Gaps = 25/571 (4%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D ++ +  +M  + V  +   +  ++N Y +VG  E+A +    I E GL P    Y  
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTS 258

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++              ++  M   G   N   Y  L+  LC   R+D A  L V+M +  
Sbjct: 259 LIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD 318

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
           C P   +YT ++ ++C   +  EA  L            +  Y  LI+ LC + K+E+A 
Sbjct: 319 CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAR 378

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL +M+++G+ PNVITY+ +I+  C  G +E +L ++  M  R   PN  ++  L+KGY
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGY 438

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                 H+A  + N+M+    LP+VV Y++LI G C +G+ D A  +   M +    P+ 
Sbjct: 439 -CKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDP 497

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+++ID   K+  +  A  +++ +      PNVV YT ++   C+    ++AH ++EK
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEK 557

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  +NC PN++TFN  I GLC  G++  A  L ++M + +  P ++T   L+  LL+   
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGD 617

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
              A+    ++   G + +  TY T +   CR G + +A  ++ KM   G   D  T++ 
Sbjct: 618 FDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSS 677

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW---------------GICNSG 530
           +I  Y   G+ N+A  +L R+   G   P   ++ SL+                G+C   
Sbjct: 678 LIKGYGDLGRTNSAFVVLKRMHDTG-CEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMS 736

Query: 531 GMQEAFI---YLQKMLNEGICPNFATWNVLV 558
            M E  I    L+KM+  G+ PN  ++  L+
Sbjct: 737 NMMEFDIVVELLEKMVEHGVTPNAKSYEKLM 767



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 166/573 (28%), Positives = 272/573 (47%), Gaps = 30/573 (5%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + S+I  Y +    + A K+F  +   G +     Y H++  L  E R      ++  M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM 314

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K D   P V TY +L+KALC + R   A  L+ EM  KG  P+  +YT ++ S+C   ++
Sbjct: 315 KDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKL 374

Query: 152 EEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E+AREL  +         V  YNALING CK   IE+A  ++  M  R + PN  TY+ +
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNEL 434

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C   NV  ++G+L +M  R   P++ ++ SL+ G    G    A  L + M   G 
Sbjct: 435 IKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+   Y+++I  LC +  ++EA  +   +E+    PNV  Y+ALIDG+ KAG +  A  
Sbjct: 494 VPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHL 553

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +  +M+S  C PN + +  ++  LC +    +A  L EKM   +  P   T    I  L 
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLL 613

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G  D A +   QM      P+  TY   +    R  R+++A ++V ++++ G+  ++ 
Sbjct: 614 KDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLF 673

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC--KQGKVNNA----- 499
           TY++++ G    G    AF +L +M   G +    TF  +I      K GKV        
Sbjct: 674 TYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVC 733

Query: 500 -----------IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA---FIYLQKMLNE 545
                      ++LL+++   G   P+  SY  L+ GIC  G ++ A   F ++Q+   E
Sbjct: 734 VMSNMMEFDIVVELLEKMVEHG-VTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQ--KE 790

Query: 546 GICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           GI P+   +N L+        H     ++DD++
Sbjct: 791 GISPSELVFNALLSCCCKLEKHNEAAKVVDDMI 823



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 291/584 (49%), Gaps = 30/584 (5%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGLKP 63
           ++ ++D    + ++M ++G   +E  +  +I+     RR+   ++A+ +F ++++    P
Sbjct: 265 QRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI---DEAMDLFVKMKDDDCYP 321

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           TV+ Y  ++ AL    R S    +   M+  G++PN+ TY +L+ +LC   +++ A +LL
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELL 381

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKE 178
            +M  KG  P+ ++Y  +++  CK G +E+A ++     +         YN LI G CK 
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR 441

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
           + + +A  +L +M++R + P+V+TY+++I   C  GN +++  +L  M  RG  P+  ++
Sbjct: 442 N-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTY 500

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           TS++       R  EA DL++ + ++  +PNVV Y+ LI G C  G ++EA  +  +M  
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLS 560

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
            +C PN  T++ALI G    G L  A+ +  +M+     P V   T ++  L ++  F  
Sbjct: 561 KNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDH 620

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A+   ++M      P+  T+ TFI+  C  GR+  A  ++ +MK+    P++ TY+ L+ 
Sbjct: 621 AYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIK 680

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH---------------GVCRAGMVVE 463
           G   + R   AF ++  +   G + +  T+ +++                GVC    ++E
Sbjct: 681 GYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMME 740

Query: 464 ---AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
                +LL KM+  G   +A ++  ++   C+ G +  A ++ D ++     +P  + + 
Sbjct: 741 FDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFN 800

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +LL   C      EA   +  M+  G  P   +  +L+  L+  
Sbjct: 801 ALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKK 844



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/496 (30%), Positives = 256/496 (51%), Gaps = 16/496 (3%)

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           NP Y +        +V++Y  LL  L  N  V   +K+ + M  K C  D+V+ T  V  
Sbjct: 116 NPRYKH--------SVYSYASLLTLLINNGYVGVVFKIRLLMI-KSC--DSVADTLFVLD 164

Query: 145 ICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +C+    +E+ EL  +   G   YN L+N L +   ++E   +  EM++  + PN+ TY+
Sbjct: 165 LCRKMNKDESFELKYKLIIGC--YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +++  C VGNVE +   +  +   G +P+  ++TSL+ GY        A  ++  M  +
Sbjct: 223 KMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLK 282

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   N VAY+ LIHGLC    +DEA+ +  +M+++ C P V TY+ LI     +     A
Sbjct: 283 GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEA 342

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             +   M   G  PN+  YT ++  LC      +A  L+ +M  +   PN +T+N  I G
Sbjct: 343 LNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALING 402

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G ++ A+ +++ M+     PN  TYNEL+ G  + N V +A  ++ ++ +  +  +
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPD 461

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +VTYN+++ G CR+G    A++LL  M   G   D  T+  +I + CK  +V  A  L D
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +    +  P+++ YT+L+ G C +G + EA + L+KML++   PN  T+N L+  L ++
Sbjct: 522 SLE-QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580

Query: 565 LGHLGPVYILDDIMAN 580
            G L    +L++ M  
Sbjct: 581 -GKLKEATLLEEKMVK 595



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 254/549 (46%), Gaps = 66/549 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  +C+++  + LL QM  +G+  +   + ++IN Y + G+ E AL +   +    
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P  + YN ++      N    +  +   ++R  + P+V TYN L+   C++   D AY
Sbjct: 424 LRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAY 482

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--------GVSVYNALI 172
           +LL  M ++G  PD  +YT+++ S+CK  +VEEA +L   F S         V +Y ALI
Sbjct: 483 RLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDL---FDSLEQKDVIPNVVMYTALI 539

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G CK  K+ EA  +L +M+ +   PN +T++ +I  LC  G ++ +  +  +M      
Sbjct: 540 DGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQ 599

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P + + T L+   L  G    A   + +M+  G  P+   Y+T I   C  G + +A  +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDM 659

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M+EN   P++ TYS+LI G+   G    A  +  RM   GC P+   +  ++K L +
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLE 719

Query: 353 ----------------NNM--FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
                           +NM  F     L+EKM      PN  ++   + G+C  G +  A
Sbjct: 720 MKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779

Query: 395 MKLLDQMKQYECL-PNITTYNELLDGLLRVNRVKEAFELVTEI----------------- 436
            K+ D M+Q E + P+   +N LL    ++ +  EA ++V ++                 
Sbjct: 780 EKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILIC 839

Query: 437 ------EK------------CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
                 EK            CG   + + +  I+ GV + G+V   ++L   M   G   
Sbjct: 840 RLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTF 899

Query: 479 DAITFNIII 487
            + T++++I
Sbjct: 900 SSQTYSLLI 908



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 145/320 (45%), Gaps = 25/320 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+   + G  + A + F ++   G KP    Y   +     E R      + + MK +G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P++FTY+ L+K      R + A+ +L  M + GC P   ++ +++  +          
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL---------- 717

Query: 156 ELAMRFGS------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            L M++G       GV V + ++       + +    LL +MV+ G+ PN  +Y  ++  
Sbjct: 718 -LEMKYGKVKGGEPGVCVMSNMM-------EFDIVVELLEKMVEHGVTPNAKSYEKLMLG 769

Query: 210 LCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           +C++GN+  +  +   M  + G +P+   F +LL       + +EA+ + + MI  G LP
Sbjct: 770 ICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLP 829

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
            + +   LI  L   G  +   SV   + +     +   +  +IDG  K G +    +++
Sbjct: 830 QLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELF 889

Query: 329 NRMISNGCSPNVVAYTCMVK 348
           N M  NGC+ +   Y+ +++
Sbjct: 890 NVMEKNGCTFSSQTYSLLIE 909


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  291 bits (744), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 165/537 (30%), Positives = 281/537 (52%), Gaps = 7/537 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           G + +++NS  R GL ++  +++  + E  + P +  YN +++           N   S 
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +   G++P+ FTY  L+   C+   +D A+K+  EM  KGC  + V+YT ++  +C   +
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303

Query: 151 VEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++EA +L ++         V  Y  LI  LC   +  EA  L+ EM + GI PN+ TY+ 
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I SLC     E +  +LGQM  +G  PN+ ++ +L+ GY   G   +A D+   M    
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN   Y+ LI G C + ++ +A+ V  +M E    P+V TY++LIDG  ++GN   A 
Sbjct: 424 LSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ + M   G  P+   YT M+  LC++    +A  L + +  +   PN V +   I G 
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G+VD A  +L++M    CLPN  T+N L+ GL    ++KEA  L  ++ K G+Q  +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            T   ++H + + G    A+    +ML  GTK DA T+   I  YC++G++ +A  ++ +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +R  G  +PD+ +Y+SL+ G  + G    AF  L++M + G  P+  T+  L++ L 
Sbjct: 663 MRENG-VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 294/630 (46%), Gaps = 67/630 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D ++ +  +M  + V  +   +  ++N Y ++G  E+A +   +I E GL P    Y  
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++              +++ M   G   N   Y  L+  LC   R+D A  L V+M +  
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318

Query: 131 CAPDAVSYTTIVSSIC-------KLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
           C P   +YT ++ S+C        L  V+E  E  ++    +  Y  LI+ LC + K E+
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK--PNIHTYTVLIDSLCSQCKFEK 376

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  LL +M+++G+ PNVITY+ +I+  C  G +E ++ ++  M  R  +PN  ++  L+K
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIK 436

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY      H+A  + N+M+    LP+VV Y++LI G C +G+ D A  +   M +    P
Sbjct: 437 GY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY+++ID   K+  +  A  +++ +   G +PNVV YT ++   C+     +AH ++
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           EKM  +NC PN++TFN  I GLC  G++  A  L ++M +    P ++T   L+  LL+ 
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
                A+    ++   G + +  TY T +   CR G +++A  ++ KM   G   D  T+
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGG--------------------------------- 510
           + +I  Y   G+ N A  +L R+R  G                                 
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735

Query: 511 ----EWN---------------PDIISYTSLLWGICNSGGMQEA---FIYLQKMLNEGIC 548
               E++               P+  SY  L+ GIC  G ++ A   F ++Q+  NEGI 
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR--NEGIS 793

Query: 549 PNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           P+   +N L+        H     ++DD++
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMI 823



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/494 (30%), Positives = 258/494 (52%), Gaps = 16/494 (3%)

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           NP Y +        +V++Y  LL  L  N  V   +K+ + M  K C  D+V     V  
Sbjct: 116 NPRYKH--------SVYSYASLLTLLINNGYVGVVFKIRLLMI-KSC--DSVGDALYVLD 164

Query: 145 ICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +C+    +E  EL  +   G   YN L+N L +   ++E   +  EM++  + PN+ TY+
Sbjct: 165 LCRKMNKDERFELKYKLIIGC--YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +++  C +GNVE +   + ++   G +P+  ++TSL+ GY        A  ++N M  +
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   N VAY+ LIHGLC    +DEA+ +  +M+++ C P V TY+ LI     +     A
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             +   M   G  PN+  YT ++  LC    F +A  L+ +M  +   PN +T+N  I G
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G ++ A+ +++ M+  +  PN  TYNEL+ G  + N V +A  ++ ++ +  +  +
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPD 461

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +VTYN+++ G CR+G    A++LL  M   G   D  T+  +I + CK  +V  A  L D
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFD 521

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G  NP+++ YT+L+ G C +G + EA + L+KML++   PN  T+N L+  L ++
Sbjct: 522 SLEQKG-VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580

Query: 565 LGHLGPVYILDDIM 578
            G L    +L++ M
Sbjct: 581 -GKLKEATLLEEKM 593



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 288/579 (49%), Gaps = 24/579 (4%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           ++ ++D    +  +M ++G   +E  +  +I+        ++A+ +F ++++    PTV+
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVR 324

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  ++ +L    R S    +   M+  G++PN+ TY +L+ +LC   + + A +LL +M
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKI 181
             KG  P+ ++Y  +++  CK G +E+A ++     + +       YN LI G CK + +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-V 443

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            +A  +L +M++R + P+V+TY+++I   C  GN +++  +L  M  RG  P+  ++TS+
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +       R  EA DL++ + ++G  PNVV Y+ LI G C  G +DEA  +  +M   +C
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  T++ALI G    G L  A+ +  +M+  G  P V   T ++  L ++  F  A+S
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
             ++M      P+  T+ TFI+  C  GR+  A  ++ +M++    P++ TY+ L+ G  
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG---------------VCRAGMVVE--- 463
            + +   AF+++  +   G + +  T+ +++                 +C    ++E   
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +LL KM+      +A ++  +I   C+ G +  A ++ D ++     +P  + + +LL
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              C      EA   +  M+  G  P   +  VL+  L+
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 253/534 (47%), Gaps = 25/534 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  +C+ +  + LL QM  +G+  +   + ++IN Y + G+ E A+ +   +    
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P  + YN ++      N    +  +   ++R  + P+V TYN L+   C++   D AY
Sbjct: 424 LSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAY 482

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           +LL  M ++G  PD  +YT+++ S+CK  +VEEA +L            V +Y ALI+G 
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++EA  +L +M+ +   PN +T++ +I  LC  G ++ +  +  +M   G  P +
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + T L+   L  G    A   + +M+  G  P+   Y+T I   C  G + +A  +  +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ--- 352
           M EN   P++ TYS+LI G+   G    A  +  RM   GC P+   +  ++K L +   
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722

Query: 353 -------------NNM--FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
                        +NM  F     L+EKM   +  PN  ++   I G+C  G +  A K+
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKV 782

Query: 398 LDQMKQYECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
            D M++ E + P+   +N LL    ++ +  EA ++V ++   G    + +   ++ G+ 
Sbjct: 783 FDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLY 842

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           + G       +   +L  G   D + + III    KQG V    +L + +   G
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/455 (22%), Positives = 205/455 (45%), Gaps = 48/455 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +   ++    L   ++ +GV+ +  ++ ++I+ Y + G  ++A  M  ++    
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N ++  L A+ +      +   M + G++P V T  IL+  L K+   D AY
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
               +M + G  PDA +YTT + + C+ G++ +A +                        
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED------------------------ 658

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 ++ +M + G+ P++ TYS++I    D+G    +  +L +M   GC P+ H+F S
Sbjct: 659 ------MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+K +LL  +  +         ++G  P + A S ++         D  V +  +M E+S
Sbjct: 713 LIK-HLLEMKYGK---------QKGSEPELCAMSNMME-------FDTVVELLEKMVEHS 755

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN-GCSPNVVAYTCMVKVLCQNNMFHQA 359
             PN  +Y  LI G  + GNL  A ++++ M  N G SP+ + +  ++   C+    ++A
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             +++ M      P   +    I GL   G  +    +   + Q     +   +  ++DG
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDG 875

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           + +   V+  +EL   +EK G + +  TY+ ++ G
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  289 bits (740), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/522 (32%), Positives = 279/522 (53%), Gaps = 13/522 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R  LAE A ++  R    G  P V +   ++  L    R S    +    +R G   +VF
Sbjct: 56  RDDLAEAA-RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF 114

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---A 158
            YN L+   C+  ++D A +L+  M     APDA +YT I+  +C  G+V EA  L    
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 159 MRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +  G   SV  Y  L+  +CK     +A  +L EM  +G  PN++TY+ II+ +C  G V
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +   L ++   G  P+  S+T++LKG     R  +  +L+  M+ +  +PN V +  L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +   C  G ++ A+ V  QM  + C  N T  + +I+   K G +  A Q  N M S GC
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           SP+ ++YT ++K LC+   +  A  L+++M  +NCPPN VTFNTFI  LC  G ++ A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L++QM ++ C  NI TYN L++G     RV  A EL   +     + N +TY T+L G+C
Sbjct: 412 LIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLC 468

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            A  +  A +LL +ML +    + +TFN+++  +C++G ++ AI+L++++   G   P++
Sbjct: 469 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG-CTPNL 527

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I+Y +LL GI      +EA   L  +++ G+ P+  T++ ++
Sbjct: 528 ITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 569



 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 277/543 (51%), Gaps = 12/543 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + L+  M V   + +    I  +    RVG   +AL +   +   G +P+V  Y 
Sbjct: 128 QLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG---EALSLLDDMLHRGCQPSVVTYT 184

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+A+     F     +   M+  G  PN+ TYN+++  +C+  RVD A + L  + + 
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  PD VSYTT++  +C   + E+  EL               ++ L+   C+   +E A
Sbjct: 245 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 304

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M   G   N    + +I+++C  G V+ +   L  M   GC+P+  S+T++LKG
Sbjct: 305 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 364

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  +A +L   M+R+   PN V ++T I  LC  G +++A  +  QM E+ C  N
Sbjct: 365 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 424

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+AL++GF   G +  A +++  M    C PN + YT ++  LC       A  L+ 
Sbjct: 425 IVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLA 481

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  ++C PN VTFN  +   C  G +D A++L++QM ++ C PN+ TYN LLDG+ +  
Sbjct: 482 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 541

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             +EA EL+  +   G+  +IVTY++I+  + R   V EA ++   +   G +  A+ +N
Sbjct: 542 NSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 601

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            I+ A CK+   + AI     +   G   P+ ++Y +L+ G+ N   ++E    L+++ +
Sbjct: 602 KILLALCKRCNTDGAIDFFAYMVSNG-CMPNELTYITLIEGLANEDFLKETRDLLRELCS 660

Query: 545 EGI 547
            G+
Sbjct: 661 RGV 663



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 271/566 (47%), Gaps = 12/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +        +L+  +  G +     + +++  Y R G  + A ++   I    
Sbjct: 84  LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMP 140

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  I+  L    R      +  +M   G +P+V TY +LL+A+CK+     A 
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           ++L EM  KGC P+ V+Y  I++ +C+ G+V++ARE   R     F      Y  ++ GL
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + E+   L  EM+++   PN +T+  ++   C  G VE ++ +L QM   GC  N 
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                ++      GR  +A    N M   G  P+ ++Y+T++ GLC     ++A  +  +
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M   +CPPN  T++  I    + G +  A+ +  +M  +GC  N+V Y  +V   C    
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   M    C PNT+T+ T + GLC   R+D A +LL +M Q +C PN+ T+N 
Sbjct: 441 VDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 497

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+    +   + EA ELV ++ + G   N++TYNT+L G+ +     EA +LL  ++  G
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D +T++ II    ++ +V  AI++   ++  G   P  + Y  +L  +C       A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG-MRPKAVIYNKILLALCKRCNTDGA 616

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
             +   M++ G  PN  T+  L+  L
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 33/366 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  + ++  +D     L  M   G S     + +V+    R    E A ++   +    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N  +  L  +        +   M   G E N+ TYN L+   C   RVD A 
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L   M    C P+ ++YTT+++                              GLC   +
Sbjct: 446 ELFYSM---PCKPNTITYTTLLT------------------------------GLCNAER 472

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++ A  LL EM+ +   PNV+T++ ++S  C  G ++ ++ ++ QM   GC PN+ ++ +
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL G      + EA +L + ++  G  P++V YS++I  L     ++EA+ + + +++  
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P    Y+ ++    K  N  GA   +  M+SNGC PN + Y  +++ L   +   +  
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652

Query: 361 SLIEKM 366
            L+ ++
Sbjct: 653 DLLREL 658



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 4/168 (2%)

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +L+D+       P++    +L+  L R  R  +A  ++   E+ G  +++  YNT++ 
Sbjct: 62  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 121

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G CR G +  A +L+  M +     DA T+  II   C +G+V  A+ LLD +   G   
Sbjct: 122 GYCRYGQLDAARRLIASMPVAP---DAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG-CQ 177

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P +++YT LL  +C S G  +A   L +M  +G  PN  T+NV++  +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGM 225



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 4/166 (2%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N  L  L+  + + EA  LV      G   ++     ++  +CR G   +A ++L     
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            GT +D   +N ++  YC+ G+++ A +L+  +       PD  +YT ++ G+C+ G + 
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVG 162

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           EA   L  ML+ G  P+  T+ VL+ ++  + G    + +LD++ A
Sbjct: 163 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ + + C  +    LL  +   GVS     + S+I    R    E+A+KMF+ +++ G
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P   IYN IL AL            ++ M  +G  PN  TY  L++ L   + +    
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652

Query: 121 KLLVEMGNKG 130
            LL E+ ++G
Sbjct: 653 DLLRELCSRG 662


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 271/530 (51%), Gaps = 11/530 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           GL + A++   R+R+  + P  +  NHIL  L    +  ++  ++  +      PNVFT+
Sbjct: 148 GLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTF 203

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-- 161
           NI++  LCK   +  A  L V M   GC+PD V+Y +++    K G +EE  +L      
Sbjct: 204 NIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRK 263

Query: 162 ---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
               + V  YNALIN   K  ++E+A+    EM  +G+  NV+T+ST + + C  G V+ 
Sbjct: 264 SGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQE 323

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ +  QM VRG  PN  ++TSL+ G    GR  +A  L + M+ +G +PNVV Y+ ++ 
Sbjct: 324 AMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVD 383

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G + EA +V   ME      N   Y+ LI G     N   A  + N+M + G   
Sbjct: 384 GLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMEL 443

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V  Y  ++  LC++    +A SL+ KMA     PNTV + T +  L   G+   A+ LL
Sbjct: 444 DVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALL 503

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++      PN+ TY  L+DGL +   + EA     ++ + G+  N+  Y  ++ G C+ 
Sbjct: 504 HKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKI 563

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + +A  L+ +M+ +G  LD + +  +I  Y KQ  + +A  L  ++   G    D+  
Sbjct: 564 GSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG-LQLDLYC 622

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           YT  + G CN   MQEA   L +M+  GI P+   +N L+R  +  LG++
Sbjct: 623 YTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRK-YQKLGNM 671



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 239/476 (50%), Gaps = 5/476 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  VI+   + G   +A  +F R++  G  P V  YN ++D          +  + S M
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           ++ G   +V TYN L+    K  R++ AY    EM  +G   + V+++T V + CK G V
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLV 321

Query: 152 EEAREL--AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA +L   MR    +     Y +L++G CK  ++++A  LL EMV +G+ PNV+TY+ +
Sbjct: 322 QEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 381

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +  LC  G V  +  +L  M   G   N   +T+L+ G+ +   +  A DL N+M  +G 
Sbjct: 382 VDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             +V  Y TLI GLC +  +DEA S+ ++M      PN   Y+ ++D   KAG    A  
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + ++++ +G  PNVV Y  ++  LC+     +A S   KM      PN   +   I G C
Sbjct: 502 LLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFC 561

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G ++ AM L+++M       +   Y  L+DG ++   +++AF L T++ + G+QL++ 
Sbjct: 562 KIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLY 621

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            Y   + G C   M+ EA  +L +M+  G   D   +N +I  Y K G +  A  L
Sbjct: 622 CYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/442 (31%), Positives = 223/442 (50%), Gaps = 5/442 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+  +++ V+ L+ +M+  G +     + ++IN + + G  E+A   F  ++  G
Sbjct: 241 LIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQG 300

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  ++  +DA   E        +++ M+  GM PN FTY  L+   CK  R+D A 
Sbjct: 301 VVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 360

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM ++G  P+ V+YT +V  +CK G+V EA   L++    GV     +Y  LI+G 
Sbjct: 361 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGH 420

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
              +  E A  LL +M ++G++ +V  Y T+I  LC    V+ +  +L +M   G  PN 
Sbjct: 421 FMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNT 480

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+++      G+  EA  L ++++  GF PNVV Y  LI GLC  GS+ EA+S   +
Sbjct: 481 VIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNK 540

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    PNV  Y+ALIDGF K G+L  A  + N MI  G S + V YT ++    +   
Sbjct: 541 MRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQAN 600

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A +L  KM       +   +  FI G C    +  A  +L +M      P+ T YN 
Sbjct: 601 LQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNC 660

Query: 416 LLDGLLRVNRVKEAFELVTEIE 437
           L+    ++  ++EA  L  E+E
Sbjct: 661 LIRKYQKLGNMEEASSLQNEME 682



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 165/357 (46%), Gaps = 40/357 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM+V G+  +E  + S+++   + G  + A+ +   +   GL P V  Y  ++D L 
Sbjct: 327 LFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 386

Query: 77  AENRFSMINPIYS-----------------------------------NMKRDGMEPNVF 101
            E + +  + + S                                    MK  GME +V 
Sbjct: 387 KEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVS 446

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
            Y  L+  LCK+ +VD A  LL +M   G  P+ V YTTI+ ++ K G+  EA  L  + 
Sbjct: 447 LYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKI 506

Query: 161 ----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
               F   V  Y ALI+GLCK   I EA     +M + G+DPNV  Y+ +I   C +G++
Sbjct: 507 LDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSL 566

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             ++ ++ +M  +G + +   +TSL+ GY+      +A  L  +MI  G   ++  Y+  
Sbjct: 567 NKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCF 626

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           I G C+   M EA  V  +M      P+ T Y+ LI  + K GN+  AS + N M S
Sbjct: 627 ISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 167/325 (51%), Gaps = 15/325 (4%)

Query: 248 GGRTHEAS---DLWNRMI-----REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           G R H A+   DL +R       R   LP+VV   TL+  L  +G +D+AV    ++ + 
Sbjct: 106 GHRPHLAASLVDLLHRAALALGPRRSALPSVV--DTLLSLLADHGLLDDAVRALARVRQL 163

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
             PPN  T + ++   A+  N  G   +  R+      PNV  +  ++  LC+     +A
Sbjct: 164 RVPPNTRTCNHILLRLAR--NRQGG--LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEA 219

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            +L  +M    C P+ VT+N+ I G   CG ++   +L+ +M++  C  ++ TYN L++ 
Sbjct: 220 RALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINC 279

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             +  R+++A+    E+++ G+  N+VT++T +   C+ G+V EA +L  +M + G   +
Sbjct: 280 FSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPN 339

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T+  ++   CK G++++AI LLD +   G   P++++YT ++ G+C  G + EA   L
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG-LVPNVVTYTVMVDGLCKEGKVAEADNVL 398

Query: 540 QKMLNEGICPNFATWNVLVRSLFSN 564
             M   G+  N   +  L+   F N
Sbjct: 399 SLMERGGVKANELLYTTLIHGHFMN 423


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  289 bits (739), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 150/515 (29%), Positives = 284/515 (55%), Gaps = 7/515 (1%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
            + A+ +F R+      P    +N IL +L+    +  +  +   M+  G++PN+   NI
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMR 160
           L+   C+   +  A+ +  ++   G  PD +++TT++  +C  GQ+++A     + +A+ 
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F      Y  LI+GLCK  +   A  LL  +    + PNV+ Y+TII S+C V  V  + 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  +M  +G +P++ ++++L+ G+ + G+ ++A DL+N+MI E   P+V  ++ L++  
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C +G M E  +V   M +    PN  TY++L+DG+     +  A  I+N M   G +P++
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
            +Y+ M+   C+   F +A +L ++M  +N  P+ VT+++ I GL   GR+ +A++L+DQ
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M      P I TYN +LD L ++++V +A  L+T+++  GIQ N+ TY+ ++ G+C++G 
Sbjct: 426 MHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A ++   +L++G  L+  T+ I+I  +C +G  N A+ LL ++   G   PD  +Y 
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG-CIPDAKTYE 544

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICP-NFATW 554
            ++  +        A   L++M+  G+ P   A W
Sbjct: 545 IIILSLFKKDENDMAEKLLREMIARGVRPRQIAIW 579



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 242/502 (48%), Gaps = 40/502 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V YL Q+M+  G+  +      +IN + ++GL   A  +F +I + G  P    +  ++ 
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIK 163

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  + +       +  +   G   +  +Y  L+  LCK      A  LL  +      P
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           + V Y TI+ S+CK+  V EA +L +     G+S     Y+ALI+G C   K+ +A  L 
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+   I P+V T++ ++++ C  G ++    +   M  +G  PN  ++ SL+ GY L 
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
              ++A  ++N M + G  P++ +YS +I+G C     DEA+++  +M   +  P+V TY
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S+LIDG +K+G +  A Q+ ++M   G  P +  Y  ++  LC+ +   +A +L+ K+  
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKD 463

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PN  T++  IKGLC  G+++ A K                   + +GLL    VK 
Sbjct: 464 KGIQPNMYTYSILIKGLCQSGKLEDARK-------------------VFEGLL----VK- 499

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
                      G  LN+ TY  ++ G C  G+  EA  LL KM   G   DA T+ III 
Sbjct: 500 -----------GHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIIL 548

Query: 489 AYCKQGKVNNAIQLLDRIRGGG 510
           +  K+ + + A +LL  +   G
Sbjct: 549 SLFKKDENDMAEKLLREMIARG 570



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 201/429 (46%), Gaps = 36/429 (8%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y++        + +++A  L   ++ R   P    ++ I+ SL    +  T L +  +M 
Sbjct: 53  YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKME 112

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM- 286
            RG  PN+ +   L+  +   G    A  ++ ++++ G++P+ + ++TLI GLC  G + 
Sbjct: 113 FRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQ 172

Query: 287 ------DEAVSVSYQMEE----------------------------NSCPPNVTTYSALI 312
                 D+ V++ +  ++                            N   PNV  Y+ +I
Sbjct: 173 QAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTII 232

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           D   K   +  A  +++ MIS G SP+VV Y+ ++   C     + A  L  KM  EN  
Sbjct: 233 DSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIK 292

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+  TFN  +   C  G++     + D M +    PN  TYN L+DG   V  V +A  +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + + G+  +I +Y+ +++G C+     EA  L  +M  +    D +T++ +I    K
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            G+++ A+QL+D++   G   P I +Y S+L  +C    + +A   L K+ ++GI PN  
Sbjct: 413 SGRISYALQLVDQMHDRG-VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMY 471

Query: 553 TWNVLVRSL 561
           T+++L++ L
Sbjct: 472 TYSILIKGL 480



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 188/382 (49%), Gaps = 16/382 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+S     + ++I+ +  +G    A+ +F ++    +KP V  +N +++A  
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      ++  M + G++PN  TYN L+   C    V+ A  +   M   G  PD  
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY+ +++  CK+ + +EA  L            V  Y++LI+GL K  +I  A  L+ +M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            DRG+ P + TY++I+ +LC +  V+ ++ +L ++  +G  PN+++++ L+KG    G+ 
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKL 486

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++  ++ +G   NV  Y+ +I G C  G  +EA+++  +ME+N C P+  TY  +
Sbjct: 487 EDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I    K      A ++   MI+ G  P  +A      +  Q    +   S  + +  ++ 
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGVRPRQIA------IWFQKKKEYDVSSEPKTLTEQSV 600

Query: 372 PPNTVTFNTFIKGLCGCGRVDW 393
           P     F     GL  C  ++W
Sbjct: 601 PKFKAMF-----GLVICDGMEW 617



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 181/366 (49%), Gaps = 5/366 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LLQ++    V  +  ++ ++I+S  +V L  +A  +F  +   G+ P V  Y+ ++    
Sbjct: 212 LLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFC 271

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    +++ M  + ++P+V+T+NIL+ A CK+ ++     +   M  +G  P+ V
Sbjct: 272 ILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFV 331

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++   C + +V +A+ +      G     +  Y+ +ING CK  K +EA  L  EM
Sbjct: 332 TYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             + I P+V+TYS++I  L   G +  +L ++ QM  RG  P I ++ S+L       + 
Sbjct: 392 HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQV 451

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L  ++  +G  PN+  YS LI GLC +G +++A  V   +       NV TY+ +
Sbjct: 452 DKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIM 511

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF   G    A  + ++M  NGC P+   Y  ++  L + +    A  L+ +M     
Sbjct: 512 IQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGV 571

Query: 372 PPNTVT 377
            P  + 
Sbjct: 572 RPRQIA 577



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 162/325 (49%), Gaps = 1/325 (0%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N  S++S    +       +A  L+NR++R    P    ++ ++  L  +      + +S
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +ME     PN+   + LI+ F + G +  A  ++ +++  G  P+ + +T ++K LC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               QA    +K+       + +++ T I GLC  G    A+ LL ++      PN+  Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N ++D + +V  V EAF+L +E+   GI  ++VTY+ ++ G C  G + +A  L  KM++
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           E  K D  TFNI++ A+CK GK+     + D +   G   P+ ++Y SL+ G C    + 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG-IKPNFVTYNSLMDGYCLVKEVN 347

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
           +A      M   G+ P+  ++++++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMI 372



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 182/383 (47%), Gaps = 2/383 (0%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N I+YS+  ++     +V+ ++ +  ++  R   P    F  +L   +     H    L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            +M   G  PN+V  + LI+  C  G +  A SV  ++ +    P+  T++ LI G    
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A    +++++ G   + ++Y  ++  LC+      A  L++++      PN V +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           NT I  +C    V+ A  L  +M      P++ TY+ L+ G   + ++ +A +L  ++  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             I+ ++ T+N +++  C+ G + E   +   M+ +G K + +T+N ++  YC   +VN 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A  + + +  GG  NPDI SY+ ++ G C      EA    ++M  + I P+  T++ L+
Sbjct: 349 AKSIFNTMAQGG-VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 559 RSLFSNLGHLGPVYILDDIMANK 581
             L S  G +     L D M ++
Sbjct: 408 DGL-SKSGRISYALQLVDQMHDR 429



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 5/229 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + +   M   GV+     +  +IN + ++   ++A+ +F  +    + P V  Y+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M   G+ P + TYN +L ALCK ++VD A  LL ++ +K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+  +Y+ ++  +C+ G++E+AR+     L       V  Y  +I G C E    EA
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             LL +M D G  P+  TY  II SL      + +  +L +M  RG  P
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 60/128 (46%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL ++K +G+  +   +  +I    + G  E A K+F  +   G    V  Y 
Sbjct: 450 QVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYT 509

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E  F+    + S M+ +G  P+  TY I++ +L K +  D A KLL EM  +
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569

Query: 130 GCAPDAVS 137
           G  P  ++
Sbjct: 570 GVRPRQIA 577


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  288 bits (738), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 151/450 (33%), Positives = 248/450 (55%), Gaps = 6/450 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  V+ S+ + G      K+F ++ + G+ P    YN ++D    + R    N +Y  M
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+EP+++TYN LL A CK  ++  A +L   M  KG  PD V+Y+TI+S +CK G+V
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 152 EEARELAMRF------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            EA E+           +    YNALINGLCK+  IE A+ LL EM  +G  P+ ITY+T
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I+S LC +G V  +      M  RG +P++ ++  LL      G+T EA  L+  +I +G
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           ++P+ V Y++++ GL    +MDEA  +  +M  + C PN  TYS ++ G  +A  +  A 
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   M   G  P+VV Y  ++  LC+ N+  +AH L   M    C P+ V+++  + GL
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   +V  A  L D+M + + +P++ T+N L+DGL +  ++ EA +L+ ++   G   + 
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           V YNT+++G+ + G  ++A +L   M  +G
Sbjct: 430 VAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 247/456 (54%), Gaps = 7/456 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN +T+ ++LK+ CK  ++   YKL  +M + G +PD + Y  ++    K G+V+EA  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 158 -----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                ++     +  YN+L+N  CKE K++EA  L   M ++G +P+V+TYSTIIS LC 
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 213 VGNVETSLGIL-GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            G V  +L +L  +M  RGC+ N  ++ +L+ G         A  L   M  +G++P+ +
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+T++ GLC  G + EA      M      P+V  Y+ L+D   K G    A +++  +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           I+ G  P+ V Y  ++  L + +   +A  + +KM    C PN  T++  + G C   +V
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A K+L++M +   +P++ TYN LLDGL + N V +A EL + +   G   +IV+Y+ +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L+G+C+   V +A  L  +M+      D +TFNI++   CK GK++ A  LLD++   G 
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSG- 424

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             PD ++Y +L+ G+   G   +A    Q M  +G 
Sbjct: 425 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 460



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 231/436 (52%), Gaps = 7/436 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           DG + L +QM   G+S     +  +I+ Y + G  ++A +++  +   GL+P++  YN +
Sbjct: 26  DGYK-LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSL 84

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV-EMGNKG 130
           L+A   E +      ++  M   G EP+V TY+ ++  LCK  +V  A ++L  +M  +G
Sbjct: 85  LNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERG 144

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
           C+ + V+Y  +++ +CK   +E A +L     S   V     YN +++GLC+  K+ EA 
Sbjct: 145 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAK 204

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
                M  RG  P+V+ Y+ ++ +L   G  + ++ +   +  +G  P+  ++ S+L G 
Sbjct: 205 QFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 264

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA +++ +M+  G  PN   YS ++ G C    +D+A  V  +M +    P+V
Sbjct: 265 ARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDV 324

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ L+DG  K   +  A ++++ M+ NGC+P++V+Y+ ++  LC+ N  H A  L ++
Sbjct: 325 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 384

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+ VTFN  + GLC  G++D A  LLDQM    C P+   YN L++GL +  R
Sbjct: 385 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444

Query: 426 VKEAFELVTEIEKCGI 441
             +A  L   +++ G 
Sbjct: 445 HIQADRLTQAMKEKGF 460



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 198/369 (53%), Gaps = 2/369 (0%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R   PN  T+  ++ S C  G +     +  QM   G +P+   +  L+ GY   GR  E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+ L+  M+  G  P++  Y++L++  C    M EA+ +   M E    P+V TYS +I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 314 GFAKAGNLLGASQ-IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           G  K G +  A + ++++MI  GCS N VAY  ++  LC++    +A+ L+E+MA +   
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +T+NT + GLC  G+V  A +  D M      P++  YN LLD L +  +  EA +L
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++   G   + VTYN+IL G+ R   + EA ++  KM+  G   +  T++I++  +C+
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
             KV++A ++L+ +   G   PD+++Y  LL G+C +  + +A      M++ G  P+  
Sbjct: 302 AKKVDDAHKVLEEMSKIGAV-PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 360

Query: 553 TWNVLVRSL 561
           +++V++  L
Sbjct: 361 SYSVVLNGL 369



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 206/396 (52%), Gaps = 2/396 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            +  ++   CK+ K+ + + L  +M+D GI P+ I Y+ +I      G V+ +  +  +M
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G  P+I+++ SLL  +    +  EA +L+  M  +GF P+VV YST+I GLC  G +
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 287 DEAVSVSY-QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
            EA+ + + +M E  C  N   Y+ALI+G  K  N+  A ++   M S G  P+ + Y  
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT 189

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+     +A    + M      P+ V +N  +  L   G+ D AMKL   +    
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +P+  TYN +L GL R + + EA E+  ++   G   N  TY+ +L G CRA  V +A 
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           ++L +M   G   D +T+NI++   CK   V+ A +L   +   G   PDI+SY+ +L G
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG-CAPDIVSYSVVLNG 368

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +C +  + +A +   +M+   + P+  T+N+L+  L
Sbjct: 369 LCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 154/293 (52%), Gaps = 5/293 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+    LL++M  +G       + ++++   R+G   +A + F  +   G  P V  YN 
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +LDAL  E +      ++ ++   G  P+  TYN +L  L + + +D A ++  +M   G
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGS--GVSVYNALINGLCKEHKIEEAF 185
           CAP+  +Y+ ++S  C+  +V++A    E   + G+   V  YN L++GLCK + +++A 
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L   MVD G  P++++YS +++ LC    V  +  +  +M  R   P++ +F  L+ G 
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
              G+  EA DL ++M   G  P+ VAY+TL++GL   G   +A  ++  M+E
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 457



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 128/245 (52%), Gaps = 2/245 (0%)

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           CSPN   +  ++K  C+       + L E+M      P+ + +N  I G    GRVD A 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +L ++M      P+I TYN LL+   +  ++KEA EL   + + G + ++VTY+TI+ G+
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 456 CRAGMVVEAFQLL-GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           C+ G V EA ++L  KM+  G   + + +N +I   CK   +  A +LL+ +   G + P
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG-YVP 182

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           D I+Y ++L G+C  G + EA  +   M + G  P+   +N L+ +L+        + + 
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242

Query: 575 DDIMA 579
            D++A
Sbjct: 243 KDVIA 247



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 132/265 (49%), Gaps = 5/265 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++   +     M   G S     +  ++++  + G  ++A+K+F  +   G  P    YN
Sbjct: 199 KVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYN 258

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L  ++       ++  M   G  PN  TY+I+L   C+  +VD A+K+L EM   
Sbjct: 259 SILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKI 318

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  PD V+Y  ++  +CK   V++A EL            +  Y+ ++NGLCK +K+ +A
Sbjct: 319 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDA 378

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M++R + P+V+T++ ++  LC  G ++ +  +L QM   GC P+  ++ +L+ G
Sbjct: 379 RVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNG 438

Query: 245 YLLGGRTHEASDLWNRMIREGFLPN 269
               GR  +A  L   M  +GFL +
Sbjct: 439 LRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 5/215 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++ + D    L + +  +G       + S++    R    ++A +MF ++   G
Sbjct: 225 LLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y+ +L       +    + +   M + G  P+V TYNILL  LCK N VD A+
Sbjct: 285 CAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 344

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           +L   M + GCAPD VSY+ +++ +CK  +V +AR L  R         V  +N L++GL
Sbjct: 345 ELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGL 404

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           CK  K++EA  LL +M   G  P+ + Y+T+++ L
Sbjct: 405 CKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  288 bits (737), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 165/518 (31%), Positives = 277/518 (53%), Gaps = 12/518 (2%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           + +A ++  R    G  P V +   ++  L    R S    +    +R G   +VF YN 
Sbjct: 90  SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG 162
           L+   C+  ++D A +L+  M     APDA +YT I+  +C  G+V EA  L    +  G
Sbjct: 150 LVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206

Query: 163 SGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
              SV  Y  L+  +CK     +A  +L EM  +G  PN++TY+ II+ +C  G V+ + 
Sbjct: 207 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 266

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
             L ++   G  P+  S+T++LKG     R  +  +L+  M+ +  +PN V +  L+   
Sbjct: 267 EFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFF 326

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G ++ A+ V  QM  + C  N T  + +I+   K G +  A Q  N M S GCSP+ 
Sbjct: 327 CRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDT 386

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           ++YT ++K LC+   +  A  L+++M  +NCPPN VTFNTFI  LC  G ++ A  L++Q
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 446

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M ++ C  NI TYN L++G     RV  A EL   +     + N +TY T+L G+C A  
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAER 503

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           +  A +LL +ML +    + +TFN+++  +C++G ++ AI+L++++   G   P++I+Y 
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG-CTPNLITYN 562

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +LL GI      +EA   L  +++ G+ P+  T++ ++
Sbjct: 563 TLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSII 600



 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 158/543 (29%), Positives = 277/543 (51%), Gaps = 12/543 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + L+  M V   + +    I  +    RVG   +AL +   +   G +P+V  Y 
Sbjct: 159 QLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVG---EALSLLDDMLHRGCQPSVVTYT 215

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+A+     F     +   M+  G  PN+ TYN+++  +C+  RVD A + L  + + 
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 275

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  PD VSYTT++  +C   + E+  EL               ++ L+   C+   +E A
Sbjct: 276 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERA 335

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M   G   N    + +I+++C  G V+ +   L  M   GC+P+  S+T++LKG
Sbjct: 336 IQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKG 395

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  +A +L   M+R+   PN V ++T I  LC  G +++A  +  QM E+ C  N
Sbjct: 396 LCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVN 455

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+AL++GF   G +  A +++  M    C PN + YT ++  LC       A  L+ 
Sbjct: 456 IVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLA 512

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  ++C PN VTFN  +   C  G +D A++L++QM ++ C PN+ TYN LLDG+ +  
Sbjct: 513 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 572

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             +EA EL+  +   G+  +IVTY++I+  + R   V EA ++   +   G +  A+ +N
Sbjct: 573 NSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 632

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            I+ A CK+   + AI     +   G   P+ ++Y +L+ G+ N   ++E    L+++ +
Sbjct: 633 KILLALCKRCNTDGAIDFFAYMVSNG-CMPNELTYITLIEGLANEDFLKETRDLLRELCS 691

Query: 545 EGI 547
            G+
Sbjct: 692 RGV 694



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 271/566 (47%), Gaps = 12/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +        +L+  +  G +     + +++  Y R G  + A ++   I    
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMP 171

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  I+  L    R      +  +M   G +P+V TY +LL+A+CK+     A 
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           ++L EM  KGC P+ V+Y  I++ +C+ G+V++ARE   R     F      Y  ++ GL
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + E+   L  EM+++   PN +T+  ++   C  G VE ++ +L QM   GC  N 
Sbjct: 292 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                ++      GR  +A    N M   G  P+ ++Y+T++ GLC     ++A  +  +
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M   +CPPN  T++  I    + G +  A+ +  +M  +GC  N+V Y  +V   C    
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   M    C PNT+T+ T + GLC   R+D A +LL +M Q +C PN+ T+N 
Sbjct: 472 VDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNV 528

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+    +   + EA ELV ++ + G   N++TYNT+L G+ +     EA +LL  ++  G
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D +T++ II    ++ +V  AI++   ++  G   P  + Y  +L  +C       A
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG-MRPKAVIYNKILLALCKRCNTDGA 647

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
             +   M++ G  PN  T+  L+  L
Sbjct: 648 IDFFAYMVSNGCMPNELTYITLIEGL 673



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 160/366 (43%), Gaps = 33/366 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  + ++  +D     L  M   G S     + +V+    R    E A ++   +    
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N  +  L  +        +   M   G E N+ TYN L+   C   RVD A 
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 476

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L   M    C P+ ++YTT+++                              GLC   +
Sbjct: 477 ELFYSM---PCKPNTITYTTLLT------------------------------GLCNAER 503

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++ A  LL EM+ +   PNV+T++ ++S  C  G ++ ++ ++ QM   GC PN+ ++ +
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL G      + EA +L + ++  G  P++V YS++I  L     ++EA+ + + +++  
Sbjct: 564 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 623

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P    Y+ ++    K  N  GA   +  M+SNGC PN + Y  +++ L   +   +  
Sbjct: 624 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 683

Query: 361 SLIEKM 366
            L+ ++
Sbjct: 684 DLLREL 689



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 128/236 (54%), Gaps = 4/236 (1%)

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A+++ +R  S G +P+V   T +++ LC+      A  ++          +   +NT + 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  G++D A +L+  M      P+  TY  ++ GL    RV EA  L+ ++   G Q 
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++VTY  +L  VC++    +A ++L +M  +G   + +T+N+II   C++G+V++A + L
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           +R+   G + PD +SYT++L G+C +   ++      +M+ +   PN  T+++LVR
Sbjct: 270 NRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 324



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A  LV      G   ++     ++  +CR G   +A ++L      GT +D   +N ++
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             YC+ G+++ A +L+  +       PD  +YT ++ G+C+ G + EA   L  ML+ G 
Sbjct: 152 AGYCRYGQLDAARRLIASM----PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGC 207

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
            P+  T+ VL+ ++  + G    + +LD++ A
Sbjct: 208 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 239



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ + + C  +    LL  +   GVS     + S+I    R    E+A+KMF+ +++ G
Sbjct: 564 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 623

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P   IYN IL AL            ++ M  +G  PN  TY  L++ L   + +    
Sbjct: 624 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 683

Query: 121 KLLVEMGNKG 130
            LL E+ ++G
Sbjct: 684 DLLRELCSRG 693


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 160/507 (31%), Positives = 269/507 (53%), Gaps = 10/507 (1%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R F + P+ + YN +L  L   +  +    +Y  M RD + P  FT+ +  +ALC+  R 
Sbjct: 134 RRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRA 193

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNAL 171
             A  LL  M   GC PDAV Y T++ ++   G V EA       L M   + V+ +N L
Sbjct: 194 GDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDL 253

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GLC   ++ EA  L+  M+ +G  P+V+TY  ++  LC     + +  +LG++     
Sbjct: 254 VLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRL----P 309

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             N+    ++++G L  G+   A++L+  M  +G  P+V  YS L+HGLC  G    AV 
Sbjct: 310 EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVR 369

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +MEE  C PN+ TYS L+  F + G    A  + ++M++ G S N   Y  ++  LC
Sbjct: 370 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALC 429

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           ++    QA  L+++M  + C P+  T+NT I  LC    ++ A  +   + +   + N  
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGI 489

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L+  LLR  R +E   L +E+   G QL++++YN ++  +C+ G V  +  LL +M
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           + +G K +  ++N++I   CK GKV +A++L   +   G   PDI++Y +L+ G+C  G 
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG-LTPDIVTYNTLINGLCKVGW 608

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLV 558
              A   L+K+ NE + P+  T+N+L+
Sbjct: 609 THAALNLLEKLPNENVHPDIVTYNILI 635



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 243/480 (50%), Gaps = 38/480 (7%)

Query: 119 AYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALI 172
           A  LL +M  +   +P   SY  ++S++ +     +A     R L  R       +    
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
             LC+  +  +A  LL  M   G  P+ + Y T+I +L   G V  +  +L +M + GC 
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++++F  L+ G    GR  EA+ L +RM+ +G +P+VV Y  L+ GLC     DEA ++
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 293 SYQMEE-------------------------------NSCPPNVTTYSALIDGFAKAGNL 321
             ++ E                                 CPP+V TYS L+ G  K G  
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++ + M   GC+PN+V Y+ ++   C+N M+  A +++++M  +    N+  +N  
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I  LC  G++D A +L+ +MK   C P+I TYN ++  L   + ++EA  +   + + G+
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N +TYNT++H + R G   E  +L  +ML+ G +LD I++N +I A CK+G V+ ++ 
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL+ +   G   P+  SY  L+  +C +G +++A    ++MLN+G+ P+  T+N L+  L
Sbjct: 545 LLEEMVTKG-IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 245/521 (47%), Gaps = 37/521 (7%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C  D +  L ++M  + V  +   F     +  R+G A  AL +   +   G  P   +Y
Sbjct: 157 CHADAL-LLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLY 215

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++ AL+A+   +    +   M   G   +V T+N L+  LC   RV  A +L+  M  
Sbjct: 216 QTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMT 275

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA-------------------------------REL 157
           +GC P  V+Y  ++  +C+  Q +EA                                EL
Sbjct: 276 QGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATEL 335

Query: 158 AMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               GS      V  Y+ L++GLCK  +   A  +L EM ++G  PN++TYST++ S C 
Sbjct: 336 YEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 395

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  + +  +L QM  +G + N   +  ++      G+  +A+ L   M  +G  P++  
Sbjct: 396 NGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICT 455

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+T+I+ LC+N  M+EA  +   + E     N  TY+ LI    + G      ++ + M+
Sbjct: 456 YNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEML 515

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +GC  +V++Y  ++K LC+     ++ +L+E+M  +   PN  ++N  I  LC  G+V 
Sbjct: 516 LHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVR 575

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  +M      P+I TYN L++GL +V     A  L+ ++    +  +IVTYN ++
Sbjct: 576 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 635

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
              C+  ++ +A  LL K +  G   +  T+ +++  + +Q
Sbjct: 636 SWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 206/383 (53%), Gaps = 6/383 (1%)

Query: 183 EAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            A  LL +M  R  + P+  +Y+ ++S+L        +L +  +M      P   +F   
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 183

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
            +     GR  +A  L   M R G +P+ V Y T+IH L + G + EA  +  +M    C
Sbjct: 184 ARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGC 243

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
             +V T++ L+ G    G +  A+++ +RM++ GC P+VV Y  +++ LC+     +A +
Sbjct: 244 AADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACA 303

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++ ++       N V  NT I+G    G++  A +L + M    C P++ TY+ L+ GL 
Sbjct: 304 MLGRLP----EVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           ++ R   A  ++ E+E+ G   NIVTY+T+LH  CR GM  +A  +L +ML +G  +++ 
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +N IIYA CK GK++ A +L+  ++  G   PDI +Y ++++ +CN+  M+EA    + 
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQG-CKPDICTYNTMIYHLCNNDLMEEAEHIFRN 478

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           ++ EG+  N  T+N L+ +L  N
Sbjct: 479 LIEEGVVANGITYNTLIHALLRN 501



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 211/449 (46%), Gaps = 34/449 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G   S   +  ++    R   A++A  M  R+ E      V + N ++   L
Sbjct: 269 LVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCL 324

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E + +    +Y  M   G  P+V TY+IL+  LCK  R   A ++L EM  KGCAP+ V
Sbjct: 325 TEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIV 384

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +Y+T                              L++  C+    ++A  +L +M+ +G 
Sbjct: 385 TYST------------------------------LLHSFCRNGMWDDARAMLDQMLAKGF 414

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
             N   Y+ II +LC  G ++ +  ++ +M  +GC P+I ++ +++          EA  
Sbjct: 415 SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEH 474

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           ++  +I EG + N + Y+TLIH L  NG   E + ++ +M  + C  +V +Y+ LI    
Sbjct: 475 IFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALC 534

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K GN+  +  +   M++ G  PN  +Y  ++  LC+      A  L ++M  +   P+ V
Sbjct: 535 KEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIV 594

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+NT I GLC  G    A+ LL+++      P+I TYN L+    +V  + +A  L+ + 
Sbjct: 595 TYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKA 654

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
              GI  N  T+  ++    R  + +E +
Sbjct: 655 ISGGIVPNERTWGMMVQNFVRQTVNLEGY 683



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L     ++  +++ + +  EGV  +   + ++I++  R G  ++ L++   +   G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +  V  YN ++ AL  E        +   M   G++PN F+YN+L+  LCK  +V  A 
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDAL 578

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L  EM N+G  PD V+Y T+++ +CK+G    A  L  +  +      +  YN LI+  
Sbjct: 579 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWH 638

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           CK   +++A  LL + +  GI PN  T+  ++ + 
Sbjct: 639 CKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF 673


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  287 bits (735), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 274/535 (51%), Gaps = 6/535 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           +F  +++SYR++G   +A+ +F   + F  +P++   N +L  LL  N+  +   ++  M
Sbjct: 147 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 206

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
               + P+V+TY  ++ A CK   V  A ++L+EMG KGC+P+ V+Y  I+  +C+   +
Sbjct: 207 CAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLL 266

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA EL            +  Y+ LING C E +  EA  +L EM+D G+ P  ITY+ +
Sbjct: 267 DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 326

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      G++E +  I  +M   G   N+  + +LL G    G+  +A ++   M+ +G 
Sbjct: 327 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 386

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+   YS LI G C   +M  A  +  +M++    P V TYS +I+G  + GNL G + 
Sbjct: 387 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 446

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I   M+ NG  PN V YT ++    +     ++  ++E+M  +   P+   +N+ I G C
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R++ A   L +M +    PN  TY   +DG  +   ++ A     E+  CG+  N+ 
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y  ++ G C+ G V EAF +   +L      D  T++++I+   + GK++ A  +   +
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  G   P+  +Y SL+ G C  G + +A   L++M  +GI P+  T+N+L+  L
Sbjct: 627 QEKGLL-PNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGL 680



 Score =  284 bits (726), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 176/588 (29%), Positives = 291/588 (49%), Gaps = 42/588 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +   + +L +M  +G S +   +  +I    R  L ++A+++   + + GL P +  Y+ 
Sbjct: 231 VKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDI 290

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++    E R      +   M   G++P   TYN L+    +   ++ A+++  EM   G
Sbjct: 291 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 350

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGLCKEHKIEEAF 185
              + + + T+++ +CK G++E+A E+       GV      Y+ LI G C+   +  AF
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM  R + P V+TYS II+ LC  GN++ +  IL +M + G  PN   +T+L+  +
Sbjct: 411 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 470

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  E+  +  RM  +G LP+V  Y++LI G C    M+EA +   +M E    PN 
Sbjct: 471 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ------------- 352
            TY A IDG++KAG +  A + +N M+S G  PNV  YT +++  C+             
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 590

Query: 353 ----------------------NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
                                 N   H+A  +  ++  +   PN  T+N+ I G C  G 
Sbjct: 591 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 650

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           VD A +LL++M      P+I TYN L+DGL +   ++ A  L  +IE  G+  N VTY  
Sbjct: 651 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAA 710

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G C++     AFQLL +ML+ G   DA  +N+I+   CK+ K   A+ L   +   G
Sbjct: 711 MVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
                 +S+ +L+ G C SG +QEA   L++M+ +   PN  T+  L+
Sbjct: 771 --FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLI 816



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/567 (28%), Positives = 290/567 (51%), Gaps = 11/567 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+    + +I+    +  +M   G+  +  ++ +++N   + G  E+AL++   + E G
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P  + Y+ +++        +    +   MK+  + P V TY++++  LC+   + G  
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +L EM   G  P+AV YTT++++  K G+VEE+R +  R         V  YN+LI G 
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++EEA   L EM++R + PN  TY   I      G +E +     +M   G  PN+
Sbjct: 506 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 565

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+L++G+   G   EA  ++  ++    L +V  YS LIHGL  NG M EA  +  +
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ++E    PN  TY++LI G  K GN+  ASQ+   M   G +P++V Y  ++  LC+   
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +L + +      PN VT+   + G C       A +LL++M      P+   YN 
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +L+   +  + ++A +L  E+ + G   + V++NT++ G C++G + EA  LL +M+ + 
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQ 533
              + +T+  +I   CK G +  A +L   ++   E N  P   +YTSLL G  N G M 
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ---ERNVMPTAKTYTSLLHGYHNIGNMS 861

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRS 560
           E     ++M+ +GI P+  T+ V++ +
Sbjct: 862 EVSALFEEMVAKGIEPDKMTYYVMIDA 888



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 271/582 (46%), Gaps = 42/582 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +MK   ++ +   +  +IN   R G  +    +   +   GLKP   +Y  ++ A  
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      I   M+  G+ P+VF YN L+   CK  R++ A   L+EM  +   P+A 
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y   +    K G++E A       L+      V +Y ALI G CKE  + EAF +   +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R +  +V TYS +I  L   G +  + GI  ++  +G  PN  ++ SL+ G    G  
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +AS L   M  +G  P++V Y+ LI GLC  G ++ A ++   +E     PN  TY+A+
Sbjct: 652 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 711

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG+ K+ N   A Q+   M+  G  P+   Y  ++   C+   F +A  L ++M  E  
Sbjct: 712 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKG 770

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +TV+FNT I+G C  G++  A  LL++M + + +PN  TY  L+D   +   + EA  
Sbjct: 771 FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 830

Query: 432 LVTEIEKCGIQLNIVTYNTILHGV-----------------------------------C 456
           L  E+++  +     TY ++LHG                                    C
Sbjct: 831 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 890

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           R G V+EA +L  ++L++G  +    ++ +I A CK+ +    ++LL+ I   G +   +
Sbjct: 891 REGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESG-FRLGL 949

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            + + +  G   +G M EA   L+ M+  G   N  +   LV
Sbjct: 950 PTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 991



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 216/435 (49%), Gaps = 6/435 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV  + G++ ++I  + + G   +A  +F  I    +   V+ Y+ ++  L    +    
Sbjct: 560 GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEA 619

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             I+S ++  G+ PN FTYN L+   CK   VD A +LL EM  KG  PD V+Y  ++  
Sbjct: 620 FGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679

Query: 145 ICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK G++E A+ L     G G++     Y A+++G CK      AF LL EM+ RG+ P+
Sbjct: 680 LCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPD 739

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
              Y+ I++  C     E +L +  +M  +G    + SF +L++GY   G+  EA+ L  
Sbjct: 740 AFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLE 798

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MI + F+PN V Y++LI   C  G M EA  +  +M+E +  P   TY++L+ G+   G
Sbjct: 799 EMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIG 858

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           N+   S ++  M++ G  P+ + Y  M+   C+     +A  L +++  +  P +   ++
Sbjct: 859 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYD 918

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I+ LC        +KLL+++ +      + T + +  G      + EA E++  + K 
Sbjct: 919 ALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF 978

Query: 440 GIQLNIVTYNTILHG 454
           G   N  +   ++ G
Sbjct: 979 GWVSNTTSLGDLVDG 993



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 230/438 (52%), Gaps = 16/438 (3%)

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFW 186
           +P++V +  ++ S  K+G + EA  + +      F   +   N+L+  L K +K+E  FW
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVE-LFW 200

Query: 187 LLCE-MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            + + M    + P+V TY+ +IS+ C VGNV+ +  +L +M  +GC+PN+ ++  ++ G 
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGL 260

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA +L   M+ +G +P++  Y  LI+G C      EA  +  +M +    P  
Sbjct: 261 CRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEP 320

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ALIDGF + G++  A +I + M++ G   N++ +  ++  +C+     +A  ++++
Sbjct: 321 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  +   P++ T++  I+G C    +  A +LLD+MK+ +  P + TY+ +++GL R   
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           ++    ++ E+   G++ N V Y T++    + G V E+  +L +M  +G   D   +N 
Sbjct: 441 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 500

Query: 486 IIYAYCKQGKVNNA----IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           +I  +CK  ++  A    +++L+R        P+  +Y + + G   +G M+ A  Y  +
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLER-----RLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 555

Query: 542 MLNEGICPNFATWNVLVR 559
           ML+ G+ PN   +  L+ 
Sbjct: 556 MLSCGVLPNVGIYTALIE 573



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 153/336 (45%), Gaps = 6/336 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ L +  EI+  + L   ++  G++ +   + ++++ Y +      A ++   +   G
Sbjct: 676  LIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRG 735

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            + P   IYN IL+    E +F     ++  M   G    V ++N L++  CK+ ++  A 
Sbjct: 736  VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEAN 794

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
             LL EM  K   P+ V+YT+++   CK G + EA+ L +             Y +L++G 
Sbjct: 795  HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 854

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                 + E   L  EMV +GI+P+ +TY  +I + C  GNV  +  +  ++ V+G   ++
Sbjct: 855  HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSV 914

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             ++ +L++         E   L N +   GF   +   S +  G    G+MDEA  V   
Sbjct: 915  AAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRS 974

Query: 296  MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            M +     N T+   L+DG     N   +  +  +M
Sbjct: 975  MVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 155/459 (33%), Positives = 262/459 (57%), Gaps = 6/459 (1%)

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG--SGVSVY 168
           C    +  A +LL EM + G APDA ++T I++++   G ++ A +     G    V  Y
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
            ALI    +  K+EEA  LL EM +RG  PN++TY+ ++ +LC +  V  +  ++ +M  
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  PN+ +F SL+ G+   G   +A  L   M+ +G  PNVV YS LI GLC +    E
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  V  +M+ +   P+  TYSALI G  KA  +  A Q+  RM  +GC+P+VV Y+ ++ 
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY-ECL 407
             C++    +A   +++M  +   P+ VT+NT I GLC  G++  A  +LDQM++  + L
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVL 300

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ TY+ +++GL + + + EA +L+  + K G   ++VTY TI+ G+C+ G + EA  L
Sbjct: 301 PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL 360

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L  M   G   + +T+  +I   CK  KV+ A ++++ +R  G   P++++Y +++ G+C
Sbjct: 361 LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG-CPPNLVTYNTMVNGLC 419

Query: 528 NSGGMQEAFIYLQKMLN-EGIC-PNFATWNVLVRSLFSN 564
            SG ++EA   +Q+M +    C P+ AT+  +V +L S+
Sbjct: 420 VSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSS 458



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 240/460 (52%), Gaps = 40/460 (8%)

Query: 87  IYSNMKRDGM--------------------------------EPNVFTYNILLKALCKNN 114
           +   MK  G                                 +PNV TY  L+ A  +  
Sbjct: 12  LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAK 71

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYN 169
           +++ A KLL EM  +GC P+ V+Y  +V ++CKL  V  A+++  +     F   V  +N
Sbjct: 72  KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFN 131

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           +L++G CK   +++A  LL  MV +G+ PNV+TYS +I  LC       +  +L +M   
Sbjct: 132 SLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKAS 191

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  P+  ++++L+ G     +  EA  +  RM   G  P+VV YS++IH  C +G + EA
Sbjct: 192 GVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEA 251

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVK 348
                +M +    P+V TY+ +IDG  K G +  A  I ++M  +G   P+VV Y+ ++ 
Sbjct: 252 QKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVIN 311

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+++M  +A  L+++M    C P+ VT+ T I GLC CGR++ A  LL  MK+  C P
Sbjct: 312 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 371

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ TY  L+ GL +  +V EA  ++ E+   G   N+VTYNT+++G+C +G + EA QL+
Sbjct: 372 NVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLV 431

Query: 469 GKMLIEGTKL--DAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            +M     +   DA T+  I+ A      V  A QLL+++
Sbjct: 432 QRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 149/435 (34%), Positives = 240/435 (55%), Gaps = 11/435 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++DG    L+ M   G   +   + ++I ++ R    E+A+K+   +RE G  P +  YN
Sbjct: 40  DLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYN 96

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DAL   +       +   M   G  PNV T+N L+   CK   VD A KLL  M  K
Sbjct: 97  VLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK 156

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEA 184
           G  P+ V+Y+ ++  +CK  +  EA+E+      SGV+     Y+ALI+GLCK  KIEEA
Sbjct: 157 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEA 216

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L  M   G  P+V+ YS+II + C  G +  +   L +M  +  +P++ ++ +++ G
Sbjct: 217 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 276

Query: 245 YLLGGRTHEASDLWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
               G+  EA  + ++M   G  LP+VV YST+I+GLC +  + EA  +  +M +  C P
Sbjct: 277 LCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +V TY+ +IDG  K G L  A  +   M   GC+PNVV YT ++  LC+     +A  ++
Sbjct: 337 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVM 396

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK--QYECLPNITTYNELLDGLL 421
           E+M    CPPN VT+NT + GLC  GR+  A +L+ +MK  + EC P+  TY  +++ L+
Sbjct: 397 EEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALM 456

Query: 422 RVNRVKEAFELVTEI 436
             + V+EA +L+ ++
Sbjct: 457 SSDLVQEAEQLLEQM 471



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 11/196 (5%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLK 62
           KLG+  E    Q +L QM+  G    + V + +VIN   +  +  +A K+  R+ + G  
Sbjct: 279 KLGKIAE---AQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCN 335

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  Y  I+D L    R      +   MKR G  PNV TY  L+  LCK  +VD A ++
Sbjct: 336 PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERV 395

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALINGL 175
           + EM N GC P+ V+Y T+V+ +C  G+++EA++L  R   G        + Y  ++N L
Sbjct: 396 MEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNAL 455

Query: 176 CKEHKIEEAFWLLCEM 191
                ++EA  LL +M
Sbjct: 456 MSSDLVQEAEQLLEQM 471



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 100/195 (51%), Gaps = 4/195 (2%)

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G +  A++LL++MK     P+  T+  ++  +     +  A +    +   G   N+
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNV 57

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTY  ++    RA  + EA +LL +M   G   + +T+N+++ A CK   V  A  ++ +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           +  GG + P+++++ SL+ G C  G + +A   L  M+ +G+ PN  T++ L+  L  + 
Sbjct: 118 MIEGG-FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 566 GHLGPVYILDDIMAN 580
             L    +L+++ A+
Sbjct: 177 KFLEAKEVLEEMKAS 191


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 310/630 (49%), Gaps = 78/630 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVS-CSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           MIEKLG   + + ++ +L +M+    S   EGV+I ++  Y R G  ++A+ +F R+  +
Sbjct: 46  MIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFY 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +P+V+ YN I++ L+    FS  + +Y  MK  G+ P+V+T+ I +K+ C   R   A
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSS----------------------------------- 144
            +LL  M  +GC  +AVSY  ++S                                    
Sbjct: 166 LRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHV 225

Query: 145 ICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK G V+E+ +L    M+ G    +  +N  I GLC++  I+EA  LL  +V  G+ P+
Sbjct: 226 LCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPD 285

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           VI+Y+T+I   C    +  +   L +M   G  PN  ++ +++ G+   G    A  +  
Sbjct: 286 VISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILR 345

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             + +GF+P+   YS+LI+GLC++G M+ A++V Y+  E     ++  Y+ L+ G +K G
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG 405

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +L A Q+   M+ +GCSP++  Y  +V  LC+      A+ ++     + C P+  TFN
Sbjct: 406 LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I G C    +D A+++LD M  +   P++ TYN LL+GL +  ++    +    + + 
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT----------------- 482
           G   NI+TYN ++   C+   V EA +L  +M   G   D +T                 
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585

Query: 483 -------------------FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
                              FNI+I A+C++  V+ A +L  ++ GG +  PD  +Y  ++
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM-GGSDCAPDNYTYRVMI 644

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
              C +G +  A  +L + +++G+ P+F T
Sbjct: 645 DSYCKTGNIDLAHTFLLENISKGLVPSFTT 674



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 6/481 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   + L  ++   GV  +   F   I    R G  ++A ++   I   G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  YN ++      ++          M   G+EPN FTYN ++   CK   +  A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMR--FGSGVSVYNALINGL 175
           K+L +   KG  PD  +Y+++++ +C  G +  A  +   AM   F   + +YN L+ GL
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K+  + +A  L+ +M++ G  P++ TY+ +++ LC +G +  + GIL     +GC P+I
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L+ GY       +A ++ + M+  G  P+V+ Y+TL++GLC    +D  V     
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E  C PN+ TY+ LI+ F K   +  A +++  M + G +P++V    ++  LC N  
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 356 FHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +A+ L   +  E     +T  FN  I   C    V  A KL  +M   +C P+  TY 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++D   +   +  A   + E    G+  +  T   +L+ +C    + EA  ++  M+  
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 475 G 475
           G
Sbjct: 702 G 702



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 253/536 (47%), Gaps = 43/536 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G   +   + +VI+ + +     +A  +F  + + G+ P +  +N ++  L 
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++S + + G+ PN+FT+NI ++ LC+   +D A +LL  + ++G  PD +
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 137 SYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           SY T++   CK  ++ EA   L     SGV      YN +ING CK   ++ A  +L + 
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G  P+  TYS++I+ LC+ G++  ++ +  +   +G   +I  + +L+KG    G  
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L   M+  G  P++  Y+ +++GLC  G + +A  +        C P++ T++ L
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+ K  N+  A +I + M+S+G +P+V+ Y  ++  LC+           + M  + C
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T+N  I+  C   +V  AM+L  +MK     P+I T   L+ GL     + +A+E
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587

Query: 432 LVTEIEK------------------CGIQLNI-------------------VTYNTILHG 454
           L   IEK                  C  +LN+                    TY  ++  
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCE-KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            C+ G +  A   L + + +G      T   ++   C   +++ A+ +++ +   G
Sbjct: 647 YCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 185/400 (46%), Gaps = 41/400 (10%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L +M   GV  +E  + ++IN + + G+ + A K+       G  P    Y+ +++ L  
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +   +    ++      G + ++  YN L+K L K   V  A +L+ +M   GC+PD  +
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428

Query: 138 YTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  +V+ +CK+G + +A  +   A+  G    +  +N LI+G CK+  +++A  +L  M+
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             GI P+VITY+T+++ LC    ++  +     M  +GC PNI ++  L++ +    +  
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA----------------------- 289
           EA +L+  M   G  P++V   TLI GLCSNG +D+A                       
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIM 608

Query: 290 ---------VSVS----YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                    VS++    ++M  + C P+  TY  +ID + K GN+  A       IS G 
Sbjct: 609 INAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            P+      ++  LC  +   +A  +I  M      P  V
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 202/430 (46%), Gaps = 36/430 (8%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           VY  ++    ++ K++EA  +   M     +P+V +Y+ I++ L + G    +  +  +M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G  P++++ T  +K + + GR   A  L N M  +G   N V+Y  +I G       
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            EA  +  +M +    P++ T++ LI    K GN+  + +++++++  G  PN+  +   
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ LC+     +A  L+E +  E   P+ +++NT I G C   ++  A   L +M     
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC---------- 456
            PN  TYN +++G  +   ++ A +++ +    G   +  TY+++++G+C          
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 457 -------------------------RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
                                    + G+V++A QL+  M+  G   D  T+N+++   C
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G +++A  +L+     G   PDI ++ +L+ G C    M +A   L  ML+ GI P+ 
Sbjct: 438 KMGCLSDANGILNDAIAKG-CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 552 ATWNVLVRSL 561
            T+N L+  L
Sbjct: 497 ITYNTLLNGL 506



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 29/261 (11%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +L  M   G++     + +++N   +    +  +  F  + E G  P +  YN 
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++++   + + S    ++  MK  G+ P++ T   L+  LC N  +D AY+L V +  + 
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
                 SY+T                         +++N +IN  C++  +  A  L  +
Sbjct: 597 ----KFSYST-------------------------AIFNIMINAFCEKLNVSMAEKLFHK 627

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M      P+  TY  +I S C  GN++ +   L +   +G  P+  +   +L    +  R
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 251 THEASDLWNRMIREGFLPNVV 271
             EA  + N M++ G +P  V
Sbjct: 688 LSEAVVIINLMVQNGIVPEEV 708


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 177/630 (28%), Positives = 309/630 (49%), Gaps = 78/630 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVS-CSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           MIEKLG   + + ++ +L +M+    S   EGV+I ++  Y R G  ++A+ +F R+  +
Sbjct: 46  MIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFY 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +P+V+ YN I++ L+    FS  + +Y  MK  G+ P+V+T+ I +K+ C   R   A
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSS----------------------------------- 144
            +LL  M  +GC  +AVSY  ++S                                    
Sbjct: 166 LRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHV 225

Query: 145 ICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK G V+E+ +L    M+ G    +  +N  I GLC++  I+EA  LL  +V  G+ P+
Sbjct: 226 LCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPD 285

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           VI+Y+T+I   C    +  +   L +M   G  PN  ++ +++ G+   G    A  +  
Sbjct: 286 VISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILR 345

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             + +GF+P+   YS+LI+GLC++G M+ A++V Y+  E     ++  Y+ L+ G +K G
Sbjct: 346 DAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQG 405

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +L A Q+   M+ +GCSP++  Y  +V  LC+      A+ ++     + C P+  TFN
Sbjct: 406 LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFN 465

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I G C    +D A+++LD M  +   P++ TYN LL+GL +  ++    +    + + 
Sbjct: 466 TLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT----------------- 482
           G   NI+TYN ++   C+   V EA +L  +M   G   D +T                 
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585

Query: 483 -------------------FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
                              FNI+I A+C +  V+ A +L  ++ GG +  PD  +Y  ++
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM-GGSDCAPDNYTYRVMI 644

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
              C +G +  A  +L + +++G+ P+F T
Sbjct: 645 DSYCKTGNIDLAHTFLLENISKGLVPSFTT 674



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 229/481 (47%), Gaps = 6/481 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   + L  ++   GV  +   F   I    R G  ++A ++   I   G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  YN ++      ++          M   G+EPN FTYN ++   CK   +  A 
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMR--FGSGVSVYNALINGL 175
           K+L +   KG  PD  +Y+++++ +C  G +  A  +   AM   F   + +YN L+ GL
Sbjct: 342 KILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGL 401

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K+  + +A  L+ +M++ G  P++ TY+ +++ LC +G +  + GIL     +GC P+I
Sbjct: 402 SKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDI 461

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L+ GY       +A ++ + M+  G  P+V+ Y+TL++GLC    +D  V     
Sbjct: 462 FTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E  C PN+ TY+ LI+ F K   +  A +++  M + G +P++V    ++  LC N  
Sbjct: 522 MLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 356 FHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +A+ L   +  E     +T  FN  I   C    V  A KL  +M   +C P+  TY 
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++D   +   +  A   + E    G+  +  T   +L+ +C    + EA  ++  M+  
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 475 G 475
           G
Sbjct: 702 G 702



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 253/536 (47%), Gaps = 43/536 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G   +   + +VI+ + +     +A  +F  + + G+ P +  +N ++  L 
Sbjct: 168 LLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++S + + G+ PN+FT+NI ++ LC+   +D A +LL  + ++G  PD +
Sbjct: 228 KKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVI 287

Query: 137 SYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           SY T++   CK  ++ EA   L     SGV      YN +ING CK   ++ A  +L + 
Sbjct: 288 SYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G  P+  TYS++I+ LC+ G++  ++ +  +   +G   +I  + +L+KG    G  
Sbjct: 348 MFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLV 407

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L   M+  G  P++  Y+ +++GLC  G + +A  +        C P++ T++ L
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTL 467

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+ K  N+  A +I + M+S+G +P+V+ Y  ++  LC+           + M  + C
Sbjct: 468 IDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGC 527

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T+N  I+  C   +V  AM+L  +MK     P+I T   L+ GL     + +A+E
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587

Query: 432 LVTEIEK------------------CGIQLNI-------------------VTYNTILHG 454
           L   IEK                  C  +LN+                    TY  ++  
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFC-XKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDS 646

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            C+ G +  A   L + + +G      T   ++   C   +++ A+ +++ +   G
Sbjct: 647 YCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 199/397 (50%), Gaps = 6/397 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L +M   GV  +E  + ++IN + + G+ + A K+       G  P    Y+ +++ L  
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +   +    ++      G + ++  YN L+K L K   V  A +L+ +M   GC+PD  +
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428

Query: 138 YTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  +V+ +CK+G + +A  +   A+  G    +  +N LI+G CK+  +++A  +L  M+
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             GI P+VITY+T+++ LC    ++  +     M  +GC PNI ++  L++ +    +  
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME-ENSCPPNVTTYSAL 311
           EA +L+  M   G  P++V   TLI GLCSNG +D+A  +   +E E     +   ++ +
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIM 608

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ F    N+  A +++++M  + C+P+   Y  M+   C+      AH+ + +   +  
Sbjct: 609 INAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            P+  T    +  LC   R+  A+ +++ M Q   +P
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 202/430 (46%), Gaps = 36/430 (8%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           VY  ++    ++ K++EA  +   M     +P+V +Y+ I++ L + G    +  +  +M
Sbjct: 78  VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRM 137

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G  P++++ T  +K + + GR   A  L N M  +G   N V+Y  +I G       
Sbjct: 138 KDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQ 197

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            EA  +  +M +    P++ T++ LI    K GN+  + +++++++  G  PN+  +   
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ LC+     +A  L+E +  E   P+ +++NT I G C   ++  A   L +M     
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC---------- 456
            PN  TYN +++G  +   ++ A +++ +    G   +  TY+++++G+C          
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377

Query: 457 -------------------------RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
                                    + G+V++A QL+  M+  G   D  T+N+++   C
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLC 437

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G +++A  +L+     G   PDI ++ +L+ G C    M +A   L  ML+ GI P+ 
Sbjct: 438 KMGCLSDANGILNDAIAKG-CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 552 ATWNVLVRSL 561
            T+N L+  L
Sbjct: 497 ITYNTLLNGL 506



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 6/246 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F ++I+ Y +    ++A+++   +   G+ P V  YN +L+ L    +   +   +  M
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAM 522

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G  PN+ TYNIL+++ CK+ +V  A +L  EM  +G  PD V+  T++  +C  G++
Sbjct: 523 LEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGEL 582

Query: 152 EEARELAM------RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++A EL +      +F    +++N +IN  C +  +  A  L  +M      P+  TY  
Sbjct: 583 DKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRV 642

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I S C  GN++ +   L +   +G  P+  +   +L    +  R  EA  + N M++ G
Sbjct: 643 MIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702

Query: 266 FLPNVV 271
            +P  V
Sbjct: 703 IVPEEV 708


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 182/623 (29%), Positives = 291/623 (46%), Gaps = 81/623 (13%)

Query: 36  VINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYNHILDALLAENR-------------- 80
           V ++Y +  + +QAL +F R+ E FG +P ++ YN +L+AL+  N+              
Sbjct: 59  VAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 118

Query: 81  ---------------------FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
                                F     + + M   G  P+VF+Y  L+ +L KN  +  A
Sbjct: 119 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDA 178

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALIN 173
            KL  EM  +G  PD   Y  ++    K G +  A E+  R   G SV      YN +IN
Sbjct: 179 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 238

Query: 174 GLCKEHKIEEAF--WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           GLCK  K +E+F  W   +  +RG D  + TYST+I  LC  GN++ +  +  +M   G 
Sbjct: 239 GLCKCGKFDESFEIWHRMKKNERGQD--LYTYSTLIHGLCGSGNLDGATRVYKEMAENGV 296

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +P++  + ++L GYL  GR  E  +LW  M +EG    VV+Y+ LI GL  N  +DEA+S
Sbjct: 297 SPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAIS 355

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   + E  C  +  TY  L+ G  K G L  A  I     +     +  AY+ M+  LC
Sbjct: 356 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 415

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +   ++++M    C PN    N  I G     +++ A++    M    C P + 
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 475

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L++GL +  R  EA+ LV E+ + G + N++TY+ +++G+C+   +  A  L  + 
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI------------------------- 506
           L +G K D    NIII+  C  GKV +A+QL   +                         
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDF 595

Query: 507 -RGGGEWN--------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            R    W+        PDIISY   L G+C+   + +A  +L   ++ G+ P   TWN+L
Sbjct: 596 ERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNIL 655

Query: 558 VRSLFSNLGHLGPVYILDDIMAN 580
           V+   +  G++ PV++   +  N
Sbjct: 656 VQGYLALKGYMEPVFVPASMKGN 678



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 114/253 (45%), Gaps = 6/253 (2%)

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AF 368
           ++ D   +         +++ ++     P +VA+        +N+M  QA  + ++M   
Sbjct: 28  SIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHA-----YAKNSMPDQALDIFQRMHEI 82

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
             C P   ++N+ +  L    + D A       +     PN+ TYN L+    R  +  +
Sbjct: 83  FGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDK 142

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A EL+  +   G   ++ +Y T+++ + + G + +A +L  +M   G   D   +NI+I 
Sbjct: 143 AKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILID 202

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            + K+G + NA ++ +R+  G    P+I SY  ++ G+C  G   E+F    +M      
Sbjct: 203 GFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERG 262

Query: 549 PNFATWNVLVRSL 561
            +  T++ L+  L
Sbjct: 263 QDLYTYSTLIHGL 275


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 274/504 (54%), Gaps = 12/504 (2%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P V +   ++  L    R S    +    +  G   +VF YN L+   C+   +D A
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALING 174
            +L+   G+   APDA +YT ++  +C  G+V +A  L    +R G    V  Y  L+  
Sbjct: 130 RRLI---GSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +CK    E+A  +L EM  +G  PN++TY+ II+ +C  G V+ +  +L ++F  GC P+
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             S+T+LLKG     R  +  +L+  M+ +  +PN V +  LI   C  G ++ A+ V  
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQ 306

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           QM E+ C  N T  + +I+   K G +  A +  N M S GC+P+ ++YT ++K LC+  
Sbjct: 307 QMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
            ++ A  L+++M   NCPPN VTFNTFI  LC  G ++ A+ L++QM+++ C   + TYN
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYN 426

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++G      +  A EL   +     + N +TY T+L G+C A  +  A +L+ +ML  
Sbjct: 427 ALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR 483

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               + +TFN+++  +C++G ++ AI+L++++   G   P++I+Y +L  GI      ++
Sbjct: 484 DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHG-CTPNLITYNTLFDGITKDCSSED 542

Query: 535 AFIYLQKMLNEGICPNFATWNVLV 558
           A   L  ++++G+ P+  T++ ++
Sbjct: 543 ALELLHGLVSKGVSPDVITFSSII 566



 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 159/543 (29%), Positives = 276/543 (50%), Gaps = 12/543 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D  + L+  M V   + +    I V+    RV     AL +   +   G +P V  Y 
Sbjct: 125 HLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVA---DALSLLDDMLRRGCQPNVVTYT 181

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+A+   + F     +   M+  G  PN+ TYN+++  +C+  RVD A  LL  + + 
Sbjct: 182 VLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSY 241

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC PD VSYTT++  +C   + ++  EL               ++ LI   C+   +E A
Sbjct: 242 GCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 301

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M +     N    + +I+S+C  G V+ +   L  M   GCNP+  S+T++LKG
Sbjct: 302 IQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKG 361

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R ++A +L   M+R    PN V ++T I  LC  G +++A+ +  QM+E+ C   
Sbjct: 362 LCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVG 421

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY+AL++GF   G++  A +++  M    C PN + YT ++  LC       A  L+ 
Sbjct: 422 VVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVA 478

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M   +CPPN VTFN  +   C  G +D A++L++QM ++ C PN+ TYN L DG+ +  
Sbjct: 479 EMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDC 538

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             ++A EL+  +   G+  +++T+++I+  + +   V EA Q+       G +  A+ +N
Sbjct: 539 SSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYN 598

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            I+   CK+ +++NAI  L  +   G   P+  +Y  L+ G+   G ++EA   L  + +
Sbjct: 599 KILLGLCKRHEIDNAIDFLAYMVSNG-CMPNESTYIILIEGLAREGLLKEAQDLLSMLCS 657

Query: 545 EGI 547
            G+
Sbjct: 658 RGV 660



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 7/272 (2%)

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS-NGCSPNVVAYTCMV 347
           A + + + E  +  PN    SA +       +L GA+++     S +G +P+V   T ++
Sbjct: 25  AAAAATRPESPNVAPNPA--SARLRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLI 82

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           + LC+      A  ++        P +   +NT + G C  G +D A +L+  M      
Sbjct: 83  RNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VA 139

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+  TY  L+  L    RV +A  L+ ++ + G Q N+VTY  +L  +C+     +A  +
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAV 199

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L +M  +G   + +T+N+II   C++G+V++A  LL+R+   G   PD +SYT+LL G+C
Sbjct: 200 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG-CQPDTVSYTTLLKGLC 258

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            S    +      +M+ +   PN  T+++L+R
Sbjct: 259 ASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR 290



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 84/154 (54%), Gaps = 4/154 (2%)

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++    +L+  L R  R  +A  ++   E  G  +++  YNT++ G CR G +  A +L
Sbjct: 73  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 132

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           +G M +     DA T+  +I   C +G+V +A+ LLD +   G   P++++YT LL  +C
Sbjct: 133 IGSMPVAP---DAYTYTPLIRVLCDRGRVADALSLLDDMLRRG-CQPNVVTYTVLLEAMC 188

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            + G ++A   L +M  +G  PN  T+NV++  +
Sbjct: 189 KNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 4/129 (3%)

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++  +CR G   +A ++L      G+ +D   +N ++  YC+ G ++ A +L+    G  
Sbjct: 81  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLI----GSM 136

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGP 570
              PD  +YT L+  +C+ G + +A   L  ML  G  PN  T+ VL+ ++  N G    
Sbjct: 137 PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQA 196

Query: 571 VYILDDIMA 579
           + +LD++ A
Sbjct: 197 MAVLDEMRA 205


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 278/511 (54%), Gaps = 6/511 (1%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
            + A+ +F R+      P    +N IL +L+    +  +  +   M+  G++PN+   NI
Sbjct: 66  VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMR 160
           L+   C+   +  A+ +  ++   G  PD +++TT+   +C  GQ+++A     + +A+ 
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F      Y  LI+GLCK  +   A  LL  +    + PNV+ Y+TII S+C V  V  + 
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  +M  +G +P++ ++++L+ G+ + G+  +A DL+N+MI E   P+V  ++ L++  
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAF 305

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C +G M E  +V   M +    PN  TY++L+DG+     +  A  I+N M   G +P++
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
            +Y+ M+   C+   F +A +L ++M  +N  P+ VT+++ I GL   GR+ +A++L+DQ
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M      PNI TYN +LD L + ++V +A  L+T+ +  G Q +I TY+ ++ G+C++G 
Sbjct: 426 MHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A ++   +L++G  LD   + I+I  +C +G  N A+ LL ++   G   PD  +Y 
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG-CIPDAKTYE 544

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
            ++  +        A   L++M+  G+  NF
Sbjct: 545 IIILSLFKKDENDMAEKLLREMIARGLPLNF 575



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 240/502 (47%), Gaps = 40/502 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V YL Q+M+  G+  +      +IN + ++GL   A  +F +I + G  P    +  +  
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSK 163

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  + +       +  +   G   +  +Y  L+  LCK      A  LL  +      P
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLL 188
           + V Y TI+ S+CK+  V EA +L     S G+S     Y+ALI+G C   K+++A  L 
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+   I P+V T++ ++++ C  G ++    +   M  +G  PN  ++ SL+ GY L 
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLV 343

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
              ++A  ++N M + G  P++ +YS +I+G C     DEA+++  +M   +  P+V TY
Sbjct: 344 KEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY 403

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S+LIDG +K+G +  A Q+ ++M   G  PN+  Y  ++  LC+ +   +A +L+ K   
Sbjct: 404 SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKD 463

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+  T++  IKGLC  G+++ A K+ +                  D L++      
Sbjct: 464 KGFQPDISTYSILIKGLCQSGKLEDARKVFE------------------DLLVK------ 499

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
                      G  L++  Y  ++ G C  G+  EA  LL KM   G   DA T+ III 
Sbjct: 500 -----------GYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIIL 548

Query: 489 AYCKQGKVNNAIQLLDRIRGGG 510
           +  K+ + + A +LL  +   G
Sbjct: 549 SLFKKDENDMAEKLLREMIARG 570



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 199/429 (46%), Gaps = 36/429 (8%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y++        + +++A  L   ++ R   P    ++ I+ SL    +  T L +  +M 
Sbjct: 53  YSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKME 112

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL----------- 276
            RG  PN+ +   L+  +   G    A  ++ ++++ G++P+ + ++TL           
Sbjct: 113 FRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQ 172

Query: 277 ------------------------IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
                                   IHGLC  G    A+ +  +++ N   PNV  Y+ +I
Sbjct: 173 QAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTII 232

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           D   K   +  A  +++ M+S G SP+VV Y+ ++   C       A  L  KM  EN  
Sbjct: 233 DSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIK 292

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+  TFN  +   C  G++     + D M +    PN  TYN L+DG   V  V +A  +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + + G+  +I +Y+ +++G C+     EA  L  +M  +    D +T++ +I    K
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            G+++ A+QL+D++   G   P+I +Y S+L  +C +  + +A   L K  ++G  P+ +
Sbjct: 413 SGRISYALQLVDQMHDRG-VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIS 471

Query: 553 TWNVLVRSL 561
           T+++L++ L
Sbjct: 472 TYSILIKGL 480



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 171/328 (52%), Gaps = 5/328 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+S     + ++I+ +  +G  + A+ +F ++    +KP V  +N +++A  
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFC 306

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      ++  M + G++PN  TYN L+   C    V+ A  +   M   G  PD  
Sbjct: 307 KDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQ 366

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY+ +++  CK+ + +EA  L            V  Y++LI+GL K  +I  A  L+ +M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            DRG+ PN+ TY++I+ +LC    V+ ++ +L +   +G  P+I +++ L+KG    G+ 
Sbjct: 427 HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKL 486

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++  ++ +G+  +V AY+ +I G C  G  +EA+++  +ME+N C P+  TY  +
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPN 339
           I    K      A ++   MI+ G   N
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGLPLN 574



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 180/363 (49%), Gaps = 5/363 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LLQ++    V  +  ++ ++I+S  +V L  +A  +F  +   G+ P V  Y+ ++    
Sbjct: 212 LLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFC 271

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +++ M  + ++P+V+T+NIL+ A CK+ ++     +   M  +G  P+ V
Sbjct: 272 ILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFV 331

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++   C + +V +A+ +      G     +  Y+ +ING CK  K +EA  L  EM
Sbjct: 332 TYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             + I P+V+TYS++I  L   G +  +L ++ QM  RG  PNI ++ S+L       + 
Sbjct: 392 HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQV 451

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L  +   +GF P++  YS LI GLC +G +++A  V   +       +V  Y+ +
Sbjct: 452 DKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIM 511

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF   G    A  + ++M  NGC P+   Y  ++  L + +    A  L+ +M     
Sbjct: 512 IQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571

Query: 372 PPN 374
           P N
Sbjct: 572 PLN 574



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 161/325 (49%), Gaps = 1/325 (0%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N  S++S    +       +A  L+NR++R    P    ++ ++  L  +      + +S
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +ME     PN+   + LI+ F + G +  A  ++ +++  G  P+ + +T + K LC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               QA    +K+       + +++ T I GLC  G    A+ LL ++      PN+  Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N ++D + +V  V EAF+L +E+   GI  ++VTY+ ++ G C  G + +A  L  KM++
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           E  K D  TFNI++ A+CK GK+     + D +   G   P+ ++Y SL+ G C    + 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG-IKPNFVTYNSLMDGYCLVKEVN 347

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
           +A      M   G+ P+  ++++++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMI 372



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 182/383 (47%), Gaps = 2/383 (0%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N I+YS+  ++     +V+ ++ +  ++  R   P    F  +L   +     H    L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            +M   G  PN+V  + LI+  C  G +  A SV  ++ +    P+  T++ L  G    
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A    +++++ G   + ++Y  ++  LC+      A  L++++      PN V +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           NT I  +C    V+ A  L  +M      P++ TY+ L+ G   + ++K+A +L  ++  
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             I+ ++ T+N +++  C+ G + E   +   M+ +G K + +T+N ++  YC   +VN 
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A  + + +  GG  NPDI SY+ ++ G C      EA    ++M  + I P+  T++ L+
Sbjct: 349 AKSIFNTMAQGG-VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407

Query: 559 RSLFSNLGHLGPVYILDDIMANK 581
             L S  G +     L D M ++
Sbjct: 408 DGL-SKSGRISYALQLVDQMHDR 429



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 5/233 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + +   M   GV+     +  +IN + ++   ++A+ +F  +    + P V  Y+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M   G+ PN+ TYN +L ALCK ++VD A  LL +  +K
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +Y+ ++  +C+ G++E+AR+     L   +   V  Y  +I G C E    EA
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEA 524

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             LL +M D G  P+  TY  II SL      + +  +L +M  RG   N + 
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFYD 577



 Score = 42.4 bits (98), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 59/130 (45%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++D    LL + K +G       +  +I    + G  E A K+F  +   G
Sbjct: 441 ILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  ++     E  F+    + S M+ +G  P+  TY I++ +L K +  D A 
Sbjct: 501 YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAE 560

Query: 121 KLLVEMGNKG 130
           KLL EM  +G
Sbjct: 561 KLLREMIARG 570


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 178/606 (29%), Positives = 289/606 (47%), Gaps = 83/606 (13%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   R+     AL +F  I   GL+P V +Y  ++ +L     F     +   M+  G
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            + +V TYN+ ++ LCKN RV  A ++   +  KG   D  +Y T+V  +CK+ + E   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 156 EL--------------------------------------AMRFGSGVS--VYNALINGL 175
           E+                                        +FG   S  VYNALIN +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+ K++EA  L   M  +G+ PN +TYS +I S C  G ++ +L  LG+M   G    +
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           + ++SL+ G+   G+   A  L++ MI  G  PNVV Y++LI G C  G +  A  + ++
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  T++ALI G   A  +  A++++  M+     PN V Y  +++  C+   
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE--------CL 407
             +A  L+++M  +   P+T T+   I GLC  GRV  A + ++ ++  +        CL
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL 605

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTE-------------------------IEKC--- 439
           PN+ TY  L++GL ++  + +A  L  E                         IEK    
Sbjct: 606 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 665

Query: 440 ------GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
                 G   N VTYN ++ G C+ G + EA ++L  M+  G   D I+++ IIY YC++
Sbjct: 666 HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 725

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G +  AI+L + +   G  NPD ++Y  L++G C +G + +AF     M+  G+ PN AT
Sbjct: 726 GDLKEAIKLWESMLNRG-VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRAT 784

Query: 554 WNVLVR 559
           +N L+ 
Sbjct: 785 YNSLIH 790



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 270/537 (50%), Gaps = 15/537 (2%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           +  +G+    G + +++    +V   E   +M   + EFG  P+    ++++D L  +  
Sbjct: 276 LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 + + +K+ G+ P++F YN L+ ++CK+ ++D A  L   MG+KG  P+ V+Y+ 
Sbjct: 336 IGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI 395

Query: 141 IVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++ S CK G+++ A     +       + V  Y++LI+G CK  K+  A  L  EM+  G
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PNV+ Y+++IS  C  G +  +  +  +M  +G +PN ++FT+L+ G     R  EA+
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L+  M+    +PN V Y+ LI G C  G+   A  +  +M E    P+  TY  LI G 
Sbjct: 516 KLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGL 575

Query: 316 AKAGNLLGASQIWNRMISN--------GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
              G +  A +  N +           GC PNVV YT ++  LC+  +  +A  L  +M 
Sbjct: 576 CSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREML 635

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
             N  PN  T+  F+  L   G ++ A++L D + +   L N  TYN L+ G  ++ R++
Sbjct: 636 ASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQ 694

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA E++  +   GI  + ++Y+TI++  CR G + EA +L   ML  G   D + +N +I
Sbjct: 695 EAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLI 754

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           Y  C  G++  A +L D +   G   P+  +Y SL+ G C    +     Y    LN
Sbjct: 755 YGCCVTGELTKAFELRDDMMRRG-VKPNRATYNSLIHGTCLMSSVSSTADYFSCKLN 810



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 272/570 (47%), Gaps = 34/570 (5%)

Query: 30  EGVFISVINSYRRVGLAE------------------QALKMFYRIREFGLKPTVKIYNHI 71
           EG+F S ++SYR+   +                     L +   + + G+ P ++  + +
Sbjct: 127 EGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGV 186

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L+ L+   +F M   ++  +   G+ P+V+ Y  ++++LC+      A +++  M + GC
Sbjct: 187 LNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGC 246

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFW 186
                +Y   +  +CK  +V EA E+          + V  Y  L+ GLCK  + E    
Sbjct: 247 DLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEE 306

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           ++ EM++ G  P+    S ++  L   GN+ ++  ++ ++   G  P++  + +L+    
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMC 366

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+  EA  L+N M  +G  PN V YS LI   C  G +D A+    +M E      V 
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            YS+LI G  K G L  A  +++ MI+NG  PNVV YT ++   C+    H A  L  +M
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   PNT TF   I GLC   R+  A KL  +M ++  +PN  TYN L++G  +    
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI----- 481
             AFEL+ E+ + G+  +  TY  ++ G+C  G V EA + +  +  E  KL+ I     
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLP 606

Query: 482 ---TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
              T+  +I   CK G ++ A +LL R        P+  +Y   L  + + G +++A I 
Sbjct: 607 NVVTYTALINGLCKIGLMDKA-ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA-IQ 664

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           L  +L EG   N  T+N+L+R  F  LG +
Sbjct: 665 LHDVLLEGFLANTVTYNILIRG-FCKLGRI 693



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 251/503 (49%), Gaps = 14/503 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E +  + ++ +M   G   SE    ++++  R+ G    A  +  ++++FG+ P++ +YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++++  + +      +++NM   G+ PN  TY+IL+ + CK  ++D A   L +M   
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G       Y++++S  CKLG++  A+ L     A      V +Y +LI+G CKE ++  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EM  +GI PN  T++ +IS LC    +  +  + G+M      PN  ++  L++G
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-------- 296
           +   G T  A +L + M+ +G +P+   Y  LI GLCS G + EA      +        
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           E   C PNV TY+ALI+G  K G +  A  +   M+++   PN   Y C +  L      
Sbjct: 600 EIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 659

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L   +  E    NTVT+N  I+G C  GR+  A ++L  M      P+  +Y+ +
Sbjct: 660 EKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTI 718

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +    R   +KEA +L   +   G+  + V YN +++G C  G + +AF+L   M+  G 
Sbjct: 719 IYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGV 778

Query: 477 KLDAITFNIIIYAYCKQGKVNNA 499
           K +  T+N +I+  C    V++ 
Sbjct: 779 KPNRATYNSLIHGTCLMSSVSST 801



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 213/435 (48%), Gaps = 20/435 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  + +  ++D  + L   M  +G+  ++  +  +I+S+ + G  + AL    ++ E G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K TV  Y+ ++       +      ++  M  +G++PNV  Y  L+   CK   +  A+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
           +L  EM  KG +P+  ++T ++S +C   ++ EA +L   FG  V          YN LI
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL---FGEMVEWNVIPNEVTYNVLI 537

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF----- 227
            G CKE     AF LL EMV++G+ P+  TY  +IS LC  G V  +   +  +      
Sbjct: 538 EGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQK 597

Query: 228 ---VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
              + GC PN+ ++T+L+ G    G   +A  L   M+    LPN   Y+  +  L S G
Sbjct: 598 LNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEG 657

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++++A+ +   + E     N  TY+ LI GF K G +  A+++   MI +G SP+ ++Y+
Sbjct: 658 NIEKAIQLHDVLLEGFL-ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYS 716

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C+     +A  L E M      P+TV +N  I G C  G +  A +L D M + 
Sbjct: 717 TIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRR 776

Query: 405 ECLPNITTYNELLDG 419
              PN  TYN L+ G
Sbjct: 777 GVKPNRATYNSLIHG 791



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 82/332 (24%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+     L  +M  +G+S +   F ++I+         +A K+F  + E+ + P    YN
Sbjct: 475 ELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYN 534

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++    E        +   M   G+ P+ +TY  L+  LC   RV  A + + ++  +
Sbjct: 535 VLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGE 594

Query: 130 --------GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR----------------- 160
                   GC P+ V+YT +++ +CK+G +++A    RE+                    
Sbjct: 595 QQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 654

Query: 161 ------------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD--------- 193
                             F +    YN LI G CK  +I+EA  +L  M+D         
Sbjct: 655 SEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCIS 714

Query: 194 --------------------------RGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
                                     RG++P+ + Y+ +I   C  G +  +  +   M 
Sbjct: 715 YSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMM 774

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            RG  PN  ++ SL+ G  L       +D ++
Sbjct: 775 RRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 13/209 (6%)

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P   T +  + GL    +   A+ L D++      P++  Y  ++  L  +     A E+
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           +  +E  G  L++ TYN  + G+C+   V EA ++   +  +G + D  T+  ++   CK
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
             +     ++++ +   G + P   + ++L+ G+   G +  AF  + K+   G+ P+  
Sbjct: 298 VEEFEAGEEMMNEMIEFG-FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLF 356

Query: 553 TWNVLV------------RSLFSNLGHLG 569
            +N L+             SLF+N+GH G
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKG 385


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 162/532 (30%), Positives = 289/532 (54%), Gaps = 23/532 (4%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A ++  R++E G  P   IYN ++        F       + M ++   P V TY  +
Sbjct: 27  EKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNI 86

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR-F 161
           +  LCK  R   A KLL EM +KGC+P+  +Y  IV  +C+  +++EA+    E+A+R +
Sbjct: 87  VDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 146

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN+ I GLCK  +++EA   L  M    + P+V++Y+T+I+ LC  G+++++  
Sbjct: 147 FPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASR 203

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L QM  RGC P++ +++SL+ G+  GG    A  L + M++ G  PN+VAY++L+  L 
Sbjct: 204 MLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 263

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + +A  +  +ME     P+V +Y+A IDG  KA  +  A  +++RM+  GC+PN  
Sbjct: 264 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 323

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ- 400
           +Y+ +V+ LC+      A +L+E+   +    + + +   + GLC  GR D A  L  + 
Sbjct: 324 SYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKV 383

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--EKCGIQLNIVTYNTILHGVCRA 458
           + +  C P++  YN +LD   +  ++ +A ++  ++    C    N+VT+N ++HG+C  
Sbjct: 384 LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC---CNVVTWNILVHGLCVD 440

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
             + +A  +L  M+ EG   D +T+  ++ A CK GK   A++L +    GG   PD+++
Sbjct: 441 DRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG-CVPDVVT 499

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN-LGHLG 569
           Y++L+ G+ +    +EA++   K+       + A WN ++     N  G LG
Sbjct: 500 YSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLG 544



 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 256/471 (54%), Gaps = 11/471 (2%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +P+ FT+ ILL+ LC++N+++ A +LL  M   GC PD   Y  ++S   K     +A +
Sbjct: 7   QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 157 LAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                        V  Y  +++GLCK  + ++A  LL EM D+G  PN+ TY+ I+  LC
Sbjct: 67  FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           +   ++ +  +L +M VRG  P++ ++ S +KG     R  EA     RM      P+VV
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVV 183

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           +Y+T+I+GLC +G +D A  +  QM    C P+V TYS+LIDGF K G +  A  + + M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  GC PN+VAY  ++  L +     +A  ++ +M      P+ V++N  I GLC   RV
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERV 303

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  + D+M +  C PN ++Y+ L++ L +   + +A  LV +  +    ++I+ Y  +
Sbjct: 304 KKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVL 363

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGT-KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           L G+C+ G   EA  L  K+L E   + D   +N+++ ++CK+ +++ A+Q+  ++    
Sbjct: 364 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             N  ++++  L+ G+C    + +A   L  M++EG  P+F T+  LV ++
Sbjct: 424 CCN--VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 472



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 273/548 (49%), Gaps = 12/548 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + LL +MK  G    + ++ ++I+ Y +     QA K    + +    PTV  Y 
Sbjct: 25  QLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYT 84

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           +I+D L    R      +   M+  G  PN++TYN++++ LC+  ++D A K+L EM  +
Sbjct: 85  NIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR 144

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF--GSGVSVYNALINGLCKEHKIEEAFWL 187
           G  PD V+Y + +  +CK  +V+EAR+   R      V  Y  +INGLCK   ++ A  +
Sbjct: 145 GYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRM 204

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L +M +RG  P+V+TYS++I   C  G VE ++G+L  M   GC PN+ ++ SLL     
Sbjct: 205 LDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 264

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   +A D+   M R GF P+VV+Y+  I GLC    + +A +V  +M E  C PN ++
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           YS L++   K   L  A  +  +        +++ YT ++  LC+   F +A +L  K+ 
Sbjct: 325 YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVL 384

Query: 368 FEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
            E  C P+   +N  +   C   ++D A+++  QM +  C  N+ T+N L+ GL   +R+
Sbjct: 385 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRL 443

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A  ++  +   G   + VTY T++  +C+ G    A +L  + +  G   D +T++ +
Sbjct: 444 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 503

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I     +     A  L  ++        D+  + +++ G   +G          +++   
Sbjct: 504 ITGLVHENMAEEAYLLFTKL--------DVALWNAMILGYAENGSGDLGLKLFVELIESD 555

Query: 547 ICPNFATW 554
           + PN  T+
Sbjct: 556 VEPNARTF 563



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 207/403 (51%), Gaps = 34/403 (8%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+D+   P+  T++ ++  LC    +E +  +LG+M   GC P+   + +L+ GY     
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A      M++   LP VV Y+ ++ GLC  G   +AV +  +M +  C PN+ TY+ 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNG--------------------------------CSP 338
           +++G  +   L  A ++   M   G                                 +P
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +VV+YT ++  LC++     A  ++++M    C P+ VT+++ I G C  G V+ AM LL
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D M +  C PN+  YN LL  L R+  + +A +++ E+E+ G   ++V+YN  + G+C+A
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
             V +A  +  +M+  G   +A ++++++   CK+ ++++AI L+++ R   +   DI+ 
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQI-VDILL 359

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRS 560
           YT LL G+C  G   EA     K+L+E IC P+   +NV++ S
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 402



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 178/336 (52%), Gaps = 4/336 (1%)

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  + C P+  +F  LL+G     +  +A  L  RM   G +P+   Y+ LI G      
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
             +A     +M +N C P V TY+ ++DG  KAG    A ++ + M   GCSPN+  Y  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V+ LC+     +A  ++E+MA     P+ VT+N+FIKGLC C RVD A K L +M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P++ +Y  +++GL +   +  A  ++ ++   G   ++VTY++++ G C+ G V  A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            LL  ML  G + + + +N ++ A  + G +  A  +L  +   G + PD++SY + + G
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG-FTPDVVSYNACIDG 296

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +C +  +++A     +M+  G  PN +++++LV  L
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEEL 332



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 210/469 (44%), Gaps = 50/469 (10%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    +L QM   G +     + S+I+ + + G  E+A+ +   + + G +P +  YN
Sbjct: 197 DLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYN 256

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L AL           +   M+R G  P+V +YN  +  LCK  RV  A  +   M  +
Sbjct: 257 SLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER 316

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEA 184
           GC P+A SY+ +V  +CK  ++++A  L  +      +     Y  L++GLCK  + +EA
Sbjct: 317 GCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEA 376

Query: 185 FWLLCEMVDRGI-DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
             L  +++D  I +P+V  Y+ ++ S C    ++ +L I  QM  R C  N+ ++  L+ 
Sbjct: 377 CALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVH 435

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G  +  R  +A  +   M+ EGF+P+ V Y TL+  +C  G    A+ +  +  +  C P
Sbjct: 436 GLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVP 495

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +V TYSALI G                                   L   NM  +A+ L 
Sbjct: 496 DVVTYSALITG-----------------------------------LVHENMAEEAYLLF 520

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG-LLR 422
            K+       +   +N  I G    G  D  +KL  ++ + +  PN  T+ + + G L++
Sbjct: 521 TKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVK 573

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
              + +A  L     K G   ++   NT++    + G + EA ++   M
Sbjct: 574 AESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 15/305 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++E+L +K E+D    L++Q + +       ++  +++   + G  ++A  +F ++ +  
Sbjct: 328 LVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 387

Query: 61  L-KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           + +P V  YN +LD+     +      I+  M       NV T+NIL+  LC ++R+  A
Sbjct: 388 ICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDA 446

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALING 174
             +L+ M ++G  PD V+Y T+V ++CK G+   A EL   A++ G    V  Y+ALI G
Sbjct: 447 ETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 506

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L  E+  EEA+ L  ++       +V  ++ +I    + G+ +  L +  ++      PN
Sbjct: 507 LVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPN 559

Query: 235 IHSFTSLLKGYLLGGRT-HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
             +F   + G L+   +  +A  L++R ++ GF P++   +TLI      G ++EA  + 
Sbjct: 560 ARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIF 619

Query: 294 YQMEE 298
           Y M++
Sbjct: 620 YSMKQ 624


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 282/535 (52%), Gaps = 6/535 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A+ +F  + +    PT   +N +  A+    ++ ++      M+ +G+E +++T  I++
Sbjct: 53  DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFG 162
              C+  ++  A+ +L      G  PD ++++T+V+  C  G+V EA     R + M+  
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +   + LINGLC + ++ EA  L+  MV+ G  P+ +TY  +++ LC  GN   +L +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M  R    ++  ++ ++      G   +A  L+N M  +G   +VV YS+LI GLC+
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           +G  D+   +  +M   +  P+V T+SALID F K G LL A +++N MI+ G +P+ + 
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+ N  H+A+ + + M  + C P+ VT++  I   C   RVD  M+L  ++ 
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               +PN  TYN L+ G  +  ++  A EL  E+   G+  ++VTY  +L G+C  G + 
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A ++  KM      L    +NIII+  C   KV++A  L   +   G   PD+++Y  +
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVM 531

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           + G+C  G + EA +  +KM  +G  P+  T+N+L+R+     G +  V +++++
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 250/492 (50%), Gaps = 5/492 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M++ G+         +IN Y R      A  +  R  + G +P    ++ +++    E R
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
            S    +   M      P++ T + L+  LC   RV  A  L+  M   G  PD V+Y  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 141 IVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++ +CK G    A +L  +       + V  Y+ +I+ LCK+   ++A  L  EM  +G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I  +V+TYS++I  LC+ G  +    +L +M  R   P++ +F++L+  ++  G+  EA 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L+N MI  G  P+ + Y++LI G C    + EA  +   M    C P++ TYS LI+ +
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            KA  +    +++  + S G  PN + Y  +V   CQ+   + A  L ++M     PP+ 
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+   + GLC  G ++ A+++ ++M++      I  YN ++ G+   ++V +A+ L   
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G++ ++VTYN ++ G+C+ G + EA  L  KM  +G   D  T+NI+I A+     
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575

Query: 496 VNNAIQLLDRIR 507
           + ++++L++ ++
Sbjct: 576 LISSVELIEEMK 587



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 228/461 (49%), Gaps = 5/461 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F +++N +   G   +A+ +  R+ E   +P +   + +++ L  + R S    +   M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G +P+  TY  +L  LCK+     A  L  +M  +      V Y+ ++ S+CK G  
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 152 EEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A     E+ M+   + V  Y++LI GLC + K ++   +L EM+ R I P+V+T+S +
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 321

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      G +  +  +  +M  RG  P+  ++ SL+ G+      HEA+ +++ M+ +G 
Sbjct: 322 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 381

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++V YS LI+  C    +D+ + +  ++      PN  TY+ L+ GF ++G L  A +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M+S G  P+VV Y  ++  LC N   ++A  + EKM           +N  I G+C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +VD A  L   +      P++ TYN ++ GL +   + EA  L  ++++ G   +  
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           TYN ++        ++ + +L+ +M + G   D+ T  ++I
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 219/419 (52%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G    E  +  V+N   + G +  AL +F ++ E  +K +V  Y+ ++D+L 
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +  F     +++ M+  G++ +V TY+ L+  LC + + D   K+L EM  +   PD V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +++ ++    K G++ EA+EL               YN+LI+G CKE+ + EA  +   M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G +P+++TYS +I+S C    V+  + +  ++  +G  PN  ++ +L+ G+   G+ 
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           + A +L+  M+  G  P+VV Y  L+ GLC NG +++A+ +  +M+++     +  Y+ +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G   A  +  A  ++  +   G  P+VV Y  M+  LC+     +A  L  KM  + C
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P+  T+N  I+   G   +  +++L+++MK      + +T   ++D +L   R+ ++F
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 614



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 213/435 (48%), Gaps = 37/435 (8%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           +S    L NG+  + K+ +A  L   M+     P  I ++ + S++      +  LG   
Sbjct: 36  LSYKERLRNGIV-DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 94

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M + G   ++++ T ++  Y    +   A  +  R  + G+ P+ + +STL++G C  G
Sbjct: 95  GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN----- 339
            + EAV++  +M E    P++ T S LI+G    G +  A  + +RM+  G  P+     
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214

Query: 340 ------------------------------VVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
                                         VV Y+ ++  LC++  F  A SL  +M  +
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               + VT+++ I GLC  G+ D   K+L +M     +P++ T++ L+D  ++  ++ EA
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL  E+   GI  + +TYN+++ G C+   + EA Q+   M+ +G + D +T++I+I +
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           YCK  +V++ ++L   I   G   P+ I+Y +L+ G C SG +  A    Q+M++ G+ P
Sbjct: 395 YCKAKRVDDGMRLFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 453

Query: 550 NFATWNVLVRSLFSN 564
           +  T+ +L+  L  N
Sbjct: 454 SVVTYGILLDGLCDN 468


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 282/535 (52%), Gaps = 6/535 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A+ +F  + +    PT   +N +  A+    ++ ++      M+ +G+E +++T  I++
Sbjct: 82  DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 141

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFG 162
              C+  ++  A+ +L      G  PD ++++T+V+  C  G+V EA     R + M+  
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +   + LINGLC + ++ EA  L+  MV+ G  P+ +TY  +++ LC  GN   +L +
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M  R    ++  ++ ++      G   +A  L+N M  +G   +VV YS+LI GLC+
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           +G  D+   +  +M   +  P+V T+SALID F K G LL A +++N MI+ G +P+ + 
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 381

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+ N  H+A+ + + M  + C P+ VT++  I   C   RVD  M+L  ++ 
Sbjct: 382 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 441

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               +PN  TYN L+ G  +  ++  A EL  E+   G+  ++VTY  +L G+C  G + 
Sbjct: 442 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 501

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A ++  KM      L    +NIII+  C   KV++A  L   +   G   PD+++Y  +
Sbjct: 502 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVM 560

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           + G+C  G + EA +  +KM  +G  P+  T+N+L+R+     G +  V +++++
Sbjct: 561 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 250/492 (50%), Gaps = 5/492 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M++ G+         +IN Y R      A  +  R  + G +P    ++ +++    E R
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
            S    +   M      P++ T + L+  LC   RV  A  L+  M   G  PD V+Y  
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244

Query: 141 IVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++ +CK G    A +L  +       + V  Y+ +I+ LCK+   ++A  L  EM  +G
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I  +V+TYS++I  LC+ G  +    +L +M  R   P++ +F++L+  ++  G+  EA 
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L+N MI  G  P+ + Y++LI G C    + EA  +   M    C P++ TYS LI+ +
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            KA  +    +++  + S G  PN + Y  +V   CQ+   + A  L ++M     PP+ 
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+   + GLC  G ++ A+++ ++M++      I  YN ++ G+   ++V +A+ L   
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G++ ++VTYN ++ G+C+ G + EA  L  KM  +G   D  T+NI+I A+     
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604

Query: 496 VNNAIQLLDRIR 507
           + ++++L++ ++
Sbjct: 605 LISSVELIEEMK 616



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 228/461 (49%), Gaps = 5/461 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F +++N +   G   +A+ +  R+ E   +P +   + +++ L  + R S    +   M
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G +P+  TY  +L  LCK+     A  L  +M  +      V Y+ ++ S+CK G  
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290

Query: 152 EEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A     E+ M+   + V  Y++LI GLC + K ++   +L EM+ R I P+V+T+S +
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSAL 350

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      G +  +  +  +M  RG  P+  ++ SL+ G+      HEA+ +++ M+ +G 
Sbjct: 351 IDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGC 410

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++V YS LI+  C    +D+ + +  ++      PN  TY+ L+ GF ++G L  A +
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 470

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M+S G  P+VV Y  ++  LC N   ++A  + EKM           +N  I G+C
Sbjct: 471 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +VD A  L   +      P++ TYN ++ GL +   + EA  L  ++++ G   +  
Sbjct: 531 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 590

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           TYN ++        ++ + +L+ +M + G   D+ T  ++I
Sbjct: 591 TYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 631



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 219/419 (52%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G    E  +  V+N   + G +  AL +F ++ E  +K +V  Y+ ++D+L 
Sbjct: 226 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +  F     +++ M+  G++ +V TY+ L+  LC + + D   K+L EM  +   PD V
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 345

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +++ ++    K G++ EA+EL               YN+LI+G CKE+ + EA  +   M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G +P+++TYS +I+S C    V+  + +  ++  +G  PN  ++ +L+ G+   G+ 
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           + A +L+  M+  G  P+VV Y  L+ GLC NG +++A+ +  +M+++     +  Y+ +
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G   A  +  A  ++  +   G  P+VV Y  M+  LC+     +A  L  KM  + C
Sbjct: 526 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P+  T+N  I+   G   +  +++L+++MK      + +T   ++D +L   R+ ++F
Sbjct: 586 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID-MLSDRRLDKSF 643



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 213/435 (48%), Gaps = 37/435 (8%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           +S    L NG+  + K+ +A  L   M+     P  I ++ + S++      +  LG   
Sbjct: 65  LSYKERLRNGIV-DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK 123

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M + G   ++++ T ++  Y    +   A  +  R  + G+ P+ + +STL++G C  G
Sbjct: 124 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 183

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN----- 339
            + EAV++  +M E    P++ T S LI+G    G +  A  + +RM+  G  P+     
Sbjct: 184 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 243

Query: 340 ------------------------------VVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
                                         VV Y+ ++  LC++  F  A SL  +M  +
Sbjct: 244 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               + VT+++ I GLC  G+ D   K+L +M     +P++ T++ L+D  ++  ++ EA
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL  E+   GI  + +TYN+++ G C+   + EA Q+   M+ +G + D +T++I+I +
Sbjct: 364 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 423

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           YCK  +V++ ++L   I   G   P+ I+Y +L+ G C SG +  A    Q+M++ G+ P
Sbjct: 424 YCKAKRVDDGMRLFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPP 482

Query: 550 NFATWNVLVRSLFSN 564
           +  T+ +L+  L  N
Sbjct: 483 SVVTYGILLDGLCDN 497


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 290/565 (51%), Gaps = 7/565 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M   GV  +   + +++    + G  E+A  +   +   G+KP  + YN++++  L E
Sbjct: 365 EEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKE 424

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
              S +  + S MK+  + P  +T  +++  LC++  ++ A ++   M + G  P+AV Y
Sbjct: 425 QNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIY 484

Query: 139 TTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVD 193
           TT++    + G+ +EA R L +    GV      YN++I GLCK  K+EEA   L EM++
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE 544

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           RG+ PNV TY  +I   C  G ++ +     +M   G  PN    T+L+ GY   G T E
Sbjct: 545 RGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE 604

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+ ++  M+     P+V  YS LIHGL  NG +  A+ +  +  E    P+V TY+++I 
Sbjct: 605 ATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIIS 664

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF K G +  A Q+   M   G SPN++ Y  ++  LC+     +A  L + +  +    
Sbjct: 665 GFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH 724

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N VT+ T I G C  G +  A +L D+M      P+   Y+ L+DG  +    ++A  L 
Sbjct: 725 NAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF 784

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E  + G   +  + N ++ G C++G V+EA QLL  M+ +  K D +T+ I+I  +CK 
Sbjct: 785 LESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKT 843

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G +  A Q    ++      P+ ++YT+LL G   +G   E F    +M+ + I P+  T
Sbjct: 844 GFLKEAEQFFVDMQKRN-LMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVT 902

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIM 578
           W+V++ +      H+  + ++DD++
Sbjct: 903 WSVMIDAHLKEGDHVKTLKLVDDML 927



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 168/601 (27%), Positives = 285/601 (47%), Gaps = 75/601 (12%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            +  +IN++ R G A++  ++ + + E G  P++  YN ++  L           +   M
Sbjct: 238 TYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLM 297

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            + G+  +VFTY+IL+    K  R   A  +L EM +KG  P  V+YT ++    + G  
Sbjct: 298 DKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357

Query: 152 EEA-RELAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST- 205
            EA R        GV +    YNAL+ G+CK   +E+A  LL EM+  GI P+  TY+  
Sbjct: 358 GEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417

Query: 206 ----------------------------------IISSLCDVGNVETSLGILGQMFVRGC 231
                                             II+ LC  G++E +  +   M   G 
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN   +T+L+KG++  GR  EA  +   M ++G  P+V+ Y+++I GLC +  M+EA  
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +M E    PNV TY ALI G+ K+G +  A + +  M+  G +PN V  T ++   C
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC 597

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A S+   M   +  P+  T++  I GL   G++  AM+LL +  +   +P++ 
Sbjct: 598 KEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVF 657

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN ++ G  +   + +AF+L   + + GI  NI+TYN +++G+C+AG +  A +L   +
Sbjct: 658 TYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI 717

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT----------- 520
             +G   +A+T+  II  YCK G ++ A +L D +   G   PD   Y+           
Sbjct: 718 PGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG-VPPDSFVYSALIDGCRKEGN 776

Query: 521 -----------------------SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
                                  +L+ G C SG + EA   L+ M+++ + P+  T+ +L
Sbjct: 777 TEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL 836

Query: 558 V 558
           +
Sbjct: 837 I 837



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 261/535 (48%), Gaps = 6/535 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I+ Y++ GL ++A+  F   +  G    +   N +L  LL  N+  +    Y+ M
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
               +  +V+TY  L+ A  +        +LL EM  KGC+P  V+Y  ++  +C+ G+V
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEV 287

Query: 152 EEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA EL          + V  Y+ LI+G  K+ +  EA  +L EM  +G+ P  + Y+ +
Sbjct: 288 DEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      G+   +  +  +M  RG   N+ ++ +L+KG    G   +A  L N MI  G 
Sbjct: 348 IDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGI 407

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+   Y+ +I G     +      +  +M++++  P   T   +I+G  + G++  AS+
Sbjct: 408 KPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASR 467

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M+S G  PN V YT ++K   Q   F +A  +++ M  +   P+ + +N+ I GLC
Sbjct: 468 VFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC 527

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +++ A   L +M +    PN+ TY  L+ G  +   ++ A     E+  CGI  N V
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDV 587

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
               ++ G C+ G   EA  +   ML      D  T++ +I+   + GK+  A++LL   
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              G   PD+ +Y S++ G C  GG+ +AF   + M  +GI PN  T+N L+  L
Sbjct: 648 LEKG-LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 284/565 (50%), Gaps = 9/565 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIE   ++     V+ LL +MK   +  +      +IN   R G  E A ++F  +   G
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP   IY  ++   + E RF     I   M + G++P+V  YN ++  LCK+ +++ A 
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAK 536

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGL 175
             LVEM  +G  P+  +Y  ++   CK G+++ A R      G G++    V  ALI+G 
Sbjct: 537 DYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGY 596

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE    EA  +   M+ R + P+V TYS +I  L   G ++ ++ +L +   +G  P++
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ S++ G+   G   +A  L   M ++G  PN++ Y+ LI+GLC  G ++ A  +   
Sbjct: 657 FTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +       N  TY+ +IDG+ K+GNL  A ++++ M   G  P+   Y+ ++    +   
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A SL  + + +    +T + N  + G C  G+V  A +LL+ M      P+  TY  
Sbjct: 777 TEKALSLFLE-SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTI 835

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+D   +   +KEA +   +++K  +  N +TY  +L G   AG   E F L  +M+ + 
Sbjct: 836 LIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKD 895

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            + D +T++++I A+ K+G     ++L+D  ++ GG  + ++     L+  +C    + E
Sbjct: 896 IEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV--LIDPLCRKEHVSE 953

Query: 535 AFIYLQKMLNEGICPNFATWNVLVR 559
               L+K+  +G+  + AT + LVR
Sbjct: 954 VLKVLEKIEEQGLNLSLATCSTLVR 978



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 267/553 (48%), Gaps = 7/553 (1%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            I+    + + M   GV  +  ++ ++I  + + G  ++A+++   + + G++P V  YN 
Sbjct: 462  IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            ++  L    +          M   G++PNV+TY  L+   CK+  +  A +   EM   G
Sbjct: 522  VIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCG 581

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             AP+ V  T ++   CK G   EA       L       V  Y+ALI+GL +  K++ A 
Sbjct: 582  IAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAM 641

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             LL E +++G+ P+V TY++IIS  C  G +  +  +   M  +G +PNI ++ +L+ G 
Sbjct: 642  ELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGL 701

Query: 246  LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               G    A +L++ +  +G   N V Y+T+I G C +G++ +A  +  +M     PP+ 
Sbjct: 702  CKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDS 761

Query: 306  TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
              YSALIDG  K GN   A  ++   +  G + +  +   ++   C++    +A+ L+E 
Sbjct: 762  FVYSALIDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLED 820

Query: 366  MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
            M  ++  P+ VT+   I   C  G +  A +    M++   +PN  TY  LL G     R
Sbjct: 821  MVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGR 880

Query: 426  VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
              E F L  E+    I+ + VT++ ++    + G  V+  +L+  ML +G  +     ++
Sbjct: 881  RSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV 940

Query: 486  IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
            +I   C++  V+  +++L++I   G  N  + + ++L+     +G M  A   L+ M+  
Sbjct: 941  LIDPLCRKEHVSEVLKVLEKIEEQG-LNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRF 999

Query: 546  GICPNFATWNVLV 558
               P+    N L+
Sbjct: 1000 KWVPDSTELNDLI 1012



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/512 (24%), Positives = 230/512 (44%), Gaps = 31/512 (6%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           ++  ++D    +  F      +   KR+G    +   N LL  L K N+++  ++    M
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGM 227

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
                  D  +YT ++++  + G  +E + L                             
Sbjct: 228 LEANVLHDVYTYTHLINAHFRAGNAKEGKRL----------------------------- 258

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L EM ++G  P+++TY+ +I  LC  G V+ +  +   M  +G   ++ +++ L+ G+ 
Sbjct: 259 -LFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFG 317

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              R  EA  +   M  +G  P  VAY+ LI G    G   EA  V  +M       N+ 
Sbjct: 318 KQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLF 377

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+AL+ G  K G++  A  + N MI  G  P+   Y  M++   +     +   L+ +M
Sbjct: 378 TYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM 437

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
              N  P   T    I GLC  G ++ A ++ + M      PN   Y  L+ G ++  R 
Sbjct: 438 KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRF 497

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           +EA  ++  ++K G+Q +++ YN+++ G+C++  + EA   L +M+  G K +  T+  +
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I+ YCK G++  A +    + G G   P+ +  T+L+ G C  G   EA    + ML   
Sbjct: 558 IHGYCKSGEMQVADRYFKEMLGCG-IAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           + P+  T++ L+  L  N    G + +L + +
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFL 648



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 192/425 (45%), Gaps = 45/425 (10%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  L    ++ G   LL +   +G+      + S+I+ + + G   +A ++   + + G
Sbjct: 627  LIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            + P +  YN +++ L           ++  +   G+  N  TY  ++   CK+  +  A+
Sbjct: 687  ISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAF 746

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
            +L  EM  KG  PD+  Y+ ++    K G  E+A  L +      F S  S+ NAL++G 
Sbjct: 747  RLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSL-NALMDGF 805

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            CK  K+ EA  LL +MVD+ + P+ +TY+ +I   C  G ++ +      M  R   PN 
Sbjct: 806  CKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNA 865

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             ++T+LL GY + GR  E   L++ MI +   P+ V                        
Sbjct: 866  LTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGV------------------------ 901

Query: 296  MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV--LCQN 353
                       T+S +ID   K G+ +   ++ + M+  G   NV    C V +  LC+ 
Sbjct: 902  -----------TWSVMIDAHLKEGDHVKTLKLVDDMLKKG--GNVSKNVCHVLIDPLCRK 948

Query: 354  NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                +   ++EK+  +    +  T +T ++     G++D A ++L  M +++ +P+ T  
Sbjct: 949  EHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTEL 1008

Query: 414  NELLD 418
            N+L++
Sbjct: 1009 NDLIN 1013


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  285 bits (728), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 169/532 (31%), Positives = 279/532 (52%), Gaps = 6/532 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  ++ +Y +     +  + F  ++  GL  ++   N +L  L+      +   IY  +
Sbjct: 29  VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 88

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G++ NV+T NI++ ALCKN +++     L +M  KG  PD V+Y T++++ C+ G +
Sbjct: 89  VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 148

Query: 152 EEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA EL     G G    V  YNA+INGLCK  K   A  +L EM+  G+ P+  TY+ +
Sbjct: 149 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 208

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C   N+  +  I  +M  +G  P++ SF++L+      G   +A   +  M   G 
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 268

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+ V Y+ LI G C NG M EA+ V  +M E  C  +V TY+ +++G  K   L  A +
Sbjct: 269 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 328

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M   G  P+   +T ++    ++   ++A +L E M   N  P+ VT+NT I G C
Sbjct: 329 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 388

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
               ++   +L + M      PN  +Y  L++G   +  V EAF L  E+ + G +  I+
Sbjct: 389 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 448

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T NTI+ G CRAG  V+A + L  ML++G   D IT+N +I  + K+  ++ A  L++++
Sbjct: 449 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 508

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G   PD+I+Y  +L G    G MQEA + + KM+  G+ P+ +T+  L+
Sbjct: 509 ENSGLL-PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 253/515 (49%), Gaps = 31/515 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  +I+  +  L  M+ +GV      + ++IN+Y R GL E+A ++   +   G
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  YN I++ L    ++     +   M + GM P+  TYNILL   C+N+ +  A 
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++  EM ++G  PD VS++                              ALI  L K   
Sbjct: 223 RIFDEMPSQGVVPDLVSFS------------------------------ALIGLLSKNGC 252

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A     +M + G+ P+ + Y+ +I   C  G +  +L +  +M  +GC  ++ ++ +
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 312

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L G        EA +L+  M   G  P+   ++TLI+G   +G+M++AV++   M + +
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 372

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V TY+ LIDGF K   +   +++WN MIS    PN ++Y  ++   C      +A 
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L ++M  +      +T NT +KG C  G    A + L  M     +P+  TYN L++G 
Sbjct: 433 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++   +  AF LV ++E  G+  +++TYN IL+G  R G + EA  ++ KM+  G   D 
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            T+  +I  +  Q  +  A ++ D +   G + PD
Sbjct: 553 STYTSLINGHVTQNNLKEAFRVHDEMLQRG-FVPD 586



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 227/451 (50%), Gaps = 8/451 (1%)

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVY 168
           +RV+    L++  GN  C  + + +  +V +  +  ++ E  E      S      ++  
Sbjct: 8   SRVEIVESLVLTYGN--CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC 65

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N+L+ GL K   ++ A+ +  E+V  G+  NV T + +I++LC    +E +   L  M  
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +G  P++ ++ +L+  Y   G   EA +L + M  +G  P V  Y+ +I+GLC  G    
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  V  +M +    P+  TY+ L+    +  N++ A +I++ M S G  P++V+++ ++ 
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 245

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
           +L +N    QA      M      P+ V +   I G C  G +  A+K+ D+M +  C+ 
Sbjct: 246 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ TYN +L+GL +   + EA EL TE+ + G+  +  T+ T+++G  + G + +A  L 
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M+    K D +T+N +I  +CK  ++    +L + +     + P+ ISY  L+ G CN
Sbjct: 366 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY-PNHISYGILINGYCN 424

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            G + EAF    +M+ +G      T N +V+
Sbjct: 425 MGCVSEAFRLWDEMVEKGFEATIITCNTIVK 455



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 208/437 (47%), Gaps = 5/437 (1%)

Query: 148 LGQVEEARELAMRFG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           + +VE    L + +G   S   V++ L+    +  K+ E       +  +G+  ++   +
Sbjct: 7   VSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++  L  VG V+ +  I  ++   G   N+++   ++       +        + M  +
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 126

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+VV Y+TLI+  C  G ++EA  +   M      P V TY+A+I+G  K G  L A
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRA 186

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             + + M+  G SP+   Y  ++   C+N+    A  + ++M  +   P+ V+F+  I  
Sbjct: 187 KGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGL 246

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G +D A+K    MK     P+   Y  L+ G  R   + EA ++  E+ + G  L+
Sbjct: 247 LSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLD 306

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +VTYNTIL+G+C+  M+ EA +L  +M   G   D  TF  +I  Y K G +N A+ L +
Sbjct: 307 VVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE 366

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +       PD+++Y +L+ G C    M++       M++  I PN  ++ +L+   + N
Sbjct: 367 MMIQRN-LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING-YCN 424

Query: 565 LGHLGPVYILDDIMANK 581
           +G +   + L D M  K
Sbjct: 425 MGCVSEAFRLWDEMVEK 441


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 157/491 (31%), Positives = 275/491 (56%), Gaps = 12/491 (2%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +P V T+ I++   CK N++  A     +M  +  AP+  +Y  +V+ +CK     +A E
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 157 L--AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTIISS 209
           +   MR G  V+     Y+ +ING CK+ +++ A  +L EMV R GI P+V+TY++++  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLP 268
           LC  G ++ +  ++ +M ++G  P+  +F++L+ G+    +  EA  L+  ++    + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +VV Y+ LI G C +G++++A+ +   ME   C PNV TYS+L+ G  KAG+L  A  ++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            RM S GC PNVV YT ++  LC  +    A  L+++M    CPP+TV++N  + G C  
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQLNIVT 447
           GR++ A +L  +M    CLP+  TY  L+ G    +R++EA  L+  ++   GI  ++VT
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y+ ++ G  RA   VEA + + +M+      +A+T++ +I   CK G+V++A+++L  + 
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
                 P + ++ S++  +C  G M EA+  L  M   G+ P   T+  L+   FS  G 
Sbjct: 423 -NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEG-FSRTGR 480

Query: 568 LGPVYILDDIM 578
           +   Y L ++M
Sbjct: 481 MEIAYELFEVM 491



 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 282/523 (53%), Gaps = 18/523 (3%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+ + +    +QAL  F ++REF + P  + YN +++ L      S    +   M RDG
Sbjct: 13  IIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDG 70

Query: 96  --MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVE 152
             + P++ TY+ ++   CK   +D A ++L EM  + G APD V+YT++V  +C+ G+++
Sbjct: 71  KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130

Query: 153 EARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCE-MVDRGIDPNVITYSTI 206
            A E+       GV      ++ALI G C   K++EA  L  E +      P+V+TY+ +
Sbjct: 131 RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTAL 190

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C  GN+E ++ +LG M  R C PN+ +++SLL G    G   +A DL+ RM  +G 
Sbjct: 191 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 250

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +PNVV Y+TLIHGLC+   +D A  +  +M    CPP+  +Y+AL+DG+ + G +  A Q
Sbjct: 251 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQ 310

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGL 385
           ++  M +  C P+ + YTC+V+  C  +   +A  L+E M       P+ VT++  + G 
Sbjct: 311 LFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 370

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
               R   A + + +M      PN  TY+ L+DGL +  RV  A E++  +    ++ ++
Sbjct: 371 SRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSV 430

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            T+N+++  +CR G + EA++LL  M   G +   +T+  ++  + + G++  A +L + 
Sbjct: 431 GTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEV 490

Query: 506 IRGGGEWNPDII------SYTSLLWGICNSGGMQEAFIYLQKM 542
           +R   + +          ++++L+ G+C +  + +A   ++++
Sbjct: 491 MRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 533



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 246/457 (53%), Gaps = 10/457 (2%)

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
           C P  V++T I+   CK  Q+++A     +    V+     YN ++NGLCK     +A+ 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 187 LLCEMVD-RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLKG 244
           +L EM D + + P+++TYST+I+  C  G ++ +  IL +M  R G  P++ ++TS++ G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPP 303
               G+   A ++   M  +G  P+   +S LI G C+   +DEA+ +  + +  +S  P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +V TY+ALIDGF K+GNL  A ++   M    C PNVV Y+ ++  LC+     QA  L 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M  + C PN VT+ T I GLC   +VD A  L+D+M    C P+  +YN LLDG  R+
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM-LIEGTKLDAIT 482
            R++EA +L  E+       + +TY  ++ G C A  + EA  LL  M    G   D +T
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           ++I++  Y +  +   A + +  +       P+ ++Y+SL+ G+C +G +  A   L+ M
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARN-VAPNAVTYSSLIDGLCKAGRVDHAMEVLKNM 421

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           +N+ + P+  T+N ++ +L   LG +   + L   MA
Sbjct: 422 VNKRVEPSVGTFNSVIGAL-CRLGDMDEAWKLLVAMA 457



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 221/447 (49%), Gaps = 16/447 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIY 68
           ++D    ++++MK++GV   +  F ++I  +      ++ALK++  I      KP V  Y
Sbjct: 128 KMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTY 187

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++D             +   M+     PNV TY+ LL  LCK   +D A  L   M +
Sbjct: 188 TALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTS 247

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEE 183
           KGC P+ V+YTT++  +C   +V+ AR L     +         YNAL++G C+  +IEE
Sbjct: 248 KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEE 307

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM-FVRGCNPNIHSFTSLL 242
           A  L  EM  +   P+ ITY+ ++   C+   +E +  +L  M    G +P++ +++ ++
Sbjct: 308 AKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVV 367

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            GY    R  EA++    MI     PN V YS+LI GLC  G +D A+ V   M      
Sbjct: 368 AGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVE 427

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V T++++I    + G++  A ++   M ++G  P +V YT +++   +      A+ L
Sbjct: 428 PSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYEL 487

Query: 363 IEKM--------AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
            E M        +  N  P    F+  I+GLC    +D AM ++++++  EC P      
Sbjct: 488 FEVMRKKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCL 546

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGI 441
            ++DGLLR  R +EA +L+  I K G+
Sbjct: 547 AIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 248/516 (48%), Gaps = 50/516 (9%)

Query: 10  EIDGVQYLLQQMKV-EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           E+D    +L++M   +G++     + SV++   R G  ++A +M   +RE  LK      
Sbjct: 92  EMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEM---VREMKLK------ 142

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MG 127
                                     G+EP+ FT++ L+   C   +VD A KL  E + 
Sbjct: 143 --------------------------GVEPDKFTFSALITGWCNARKVDEALKLYKEILT 176

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
           +    PD V+YT ++   CK G +E+A ++       +    V  Y++L++GLCK   ++
Sbjct: 177 SSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 236

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A  L   M  +G  PNV+TY+T+I  LC    V+ +  ++ +M    C P+  S+ +LL
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALL 296

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS-C 301
            GY   GR  EA  L+  M  +  LP+ + Y+ L+ G C+   ++EA  +   M+  +  
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 356

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+V TYS ++ G+++A   + A++    MI+   +PN V Y+ ++  LC+      A  
Sbjct: 357 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAME 416

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +++ M  +   P+  TFN+ I  LC  G +D A KLL  M  +   P + TY  LL+G  
Sbjct: 417 VLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFS 476

Query: 422 RVNRVKEAFELVTEIE----KCGIQLNIV---TYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           R  R++ A+EL   +     K     N+V    ++ ++ G+C+A  + +A  ++ ++   
Sbjct: 477 RTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSR 536

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
             +        I+    + G+   A +L++ I   G
Sbjct: 537 ECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 96/159 (60%), Gaps = 10/159 (6%)

Query: 405 ECLPNITTYNELLDGLLRVNRVKEA---FELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           EC P + T+  ++DG  + N++K+A   FE + E     +  N  TYN +++G+C+A + 
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF----VAPNERTYNVVVNGLCKARLT 57

Query: 462 VEAFQLLGKMLIEGTKL--DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +A+++L +M  +G  +  D +T++ +I  +CKQG+++ A ++L  +       PD+++Y
Sbjct: 58  SKAYEVLKEMR-DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTY 116

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           TS++ G+C  G M  A   +++M  +G+ P+  T++ L+
Sbjct: 117 TSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 155



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 7/164 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    +L+ M  + V  S G F SVI +  R+G  ++A K+   +   G
Sbjct: 401 LIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 460

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF-------TYNILLKALCKN 113
           L+P +  Y  +L+      R  +   ++  M++   + +          ++ L++ LCK 
Sbjct: 461 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKA 520

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
             +D A  ++ E+ ++ C P       IV  + + G+ EEA +L
Sbjct: 521 REIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 564


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 173/542 (31%), Positives = 274/542 (50%), Gaps = 45/542 (8%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 92  CTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 144

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTT 140
            ++ +   M + G  PNVF+YNILLK LC  NR   A +LL  M + G  C PD VSYTT
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +                              ING  KE  +++A+    EM+DRGI PNV
Sbjct: 205 V------------------------------INGFFKEGDLDKAYGTYHEMLDRGILPNV 234

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TYS+II++LC    ++ ++ +L  M   G  PN  ++ S++ GY   G+  EA     +
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P+VV Y++L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+    + + M+ NG  PN   ++ ++    +     QA  +  KM  +   P+TVT+ T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GRV+ AM+  +QM      P    YN L+  L   ++  +A EL+ E+   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I L+ + +N+I+   C+ G V+E+ +L   M+  G K D IT++ +I  YC  GK++ A 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +LL  +   G   PD ++Y +L+ G C    M++A +  ++M + G+ P+  T+N++++ 
Sbjct: 535 KLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593

Query: 561 LF 562
           LF
Sbjct: 594 LF 595



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 269/553 (48%), Gaps = 8/553 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LLQ M  +G  C   V  + +VIN + + G  ++A   ++ + + G+ P V  Y+ I+ A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           + ++M ++G+ PN  TYN ++   C + +   A   L +M + G  PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y +++  +CK G+  EAR++            ++ Y  L+ G   +  + E   LL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  GI PN   +S +I +    G V+ ++ +  +M  +G NP+  ++ +++      G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A   + +MI E   P  + Y++LIH LC     D+A  +  +M +     +   ++
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++ID   K G ++ + ++++ M+  G  P+++ Y+ ++   C      +A  L+  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT+NT I G C   R++ A+ L  +M+     P+I TYN +L GL +  R   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   I + G QL + TYN ILHG+C+  +  EA ++   + +   +L+  TFNI+I A
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             K G+ + A  L   +   G   PD+ +Y+ +   +   G ++E       M   G   
Sbjct: 664 LLKVGRNDEAKDLFAALSANG-LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 550 NFATWNVLVRSLF 562
           N    N +VR L 
Sbjct: 723 NSRMLNSIVRKLL 735



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 256/515 (49%), Gaps = 8/515 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME--PNVFTYNILLKALCK 112
           R+ + G  P V  YN +L  L  ENR      +   M  DG +  P+V +Y  ++    K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV----SV 167
              +D AY    EM ++G  P+ V+Y++I++++CK   +++A E L     +GV      
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +  +   M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            RG  P I ++ +LL+GY   G   E   L + M+R G  PN   +S LI      G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A+ V  +M +    P+  TY  +I    K+G +  A + + +MI    SP  + Y  ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC  + + +A  LI +M       +T+ FN+ I   C  GRV  + KL D M +    
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+I TY+ L+DG     ++ EA +L+  +   G++ + VTYNT+++G C+   + +A  L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   D IT+NII+    +  +   A +L   I   G    ++ +Y  +L G+C
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG-TQLELSTYNIILHGLC 630

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +    EA    Q +    +     T+N+++ +L 
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 220/422 (52%), Gaps = 13/422 (3%)

Query: 151 VEEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVIT 202
            E+AR +    +R G G S+Y  N  +  + + H    A      M   G D   PN+ T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y  +I S C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCPPNVTTYSALIDGFAKAG 319
            + G +PNV +Y+ L+ GLC      EA+ +   M ++   CPP+V +Y+ +I+GF K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L  A   ++ M+  G  PNVV Y+ ++  LC+     +A  ++  M      PN  T+N
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M      P++ TYN L+D L +  R  EA ++   + K 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   +   F+I+I AY KQGKV+ A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NPD ++Y +++  +C SG +++A  Y ++M++E + P    +N L+ 
Sbjct: 394 MLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 560 SL 561
           SL
Sbjct: 453 SL 454



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 232/453 (51%), Gaps = 5/453 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L++M  +GV      + S+++   + G   +A KMF  + + GLKP +  Y  +L    
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA 350

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +     ++ +   M R+G+ PN + ++IL+ A  K  +VD A  +  +M  +G  PD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +CK G+VE+A     + +  R   G  VYN+LI+ LC   K ++A  L+ EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +DRGI  + I +++II S C  G V  S  +   M   G  P+I ++++L+ GY L G+ 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L   M+  G  P+ V Y+TLI+G C    M++A+ +  +ME +   P++ TY+ +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +      A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   + 
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              T TFN  I  L   GR D A  L   +     +P++ TY+ + + L+    ++E  +
Sbjct: 651 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 710

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           L   +E+ G   N    N+I+  + + G +  A
Sbjct: 711 LFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 40/428 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G+  +  VF  +I +Y + G  +QA+ +F ++R+ GL P    Y  ++  L 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R       +  M  + + P    YN L+ +LC  ++ D A +L++EM ++G   D +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            + +I+ S CK G+V E+    +L +R G    +  Y+ LI+G C   K++EA  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G+ P+ +TY+T+I+  C +  +E +L +  +M   G +P+I ++  +L+G     RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSN---------------------------- 283
             A +L+  +   G    +  Y+ ++HGLC N                            
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 284 -------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                  G  DEA  +   +  N   P+V TYS + +   + G L     ++  M  NGC
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N      +V+ L Q     +A + +  +  ++      T + F+  L G    ++   
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRF 780

Query: 397 LLDQMKQY 404
           L ++ K +
Sbjct: 781 LPEKYKSF 788



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +PN+  Y  ++   C         + +  +  +    + + F   +KG
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--I 441
           LC   R   AM + L +M Q  C+PN+ +YN LL GL   NR +EA EL+  +   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++V+Y T+++G  + G + +A+    +ML  G   + +T++ II A CK   ++ A++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +   G   P+  +Y S++ G C+SG  +EA  +L+KM ++G+ P+  T+N L+  L
Sbjct: 256 VLTSMVKNGVM-PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 562 FSN 564
             N
Sbjct: 315 CKN 317



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 40/318 (12%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G+      F S+I+S+ + G   ++ K+F  +   G+KP +  Y+ +
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D      +      + ++M   GM+P+  TYN L+   CK +R++ A  L  EM + G 
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFW 186
           +PD ++Y  I+  + +  +   A+EL +          +S YN +++GLCK +  +EA  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +   +    +     T++ +I +L  VG                                
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVG-------------------------------- 668

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              R  EA DL+  +   G +P+V  YS +   L   G ++E   +   MEEN C  N  
Sbjct: 669 ---RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 307 TYSALIDGFAKAGNLLGA 324
             ++++    + G++  A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 31/279 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL  M   G+      + ++IN Y ++   E AL +F  +   G+ P +  YN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L    R +    +Y  +   G +  + TYNI+L  LCKNN  D A ++   +   
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL--- 645

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            C  D               Q+E               +N +I  L K  + +EA  L  
Sbjct: 646 -CLTDL--------------QLE------------TRTFNIMIGALLKVGRNDEAKDLFA 678

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +   G+ P+V TYS +  +L + G +E    +   M   GC  N     S+++  L  G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               A   +  MI E       + ++L   L S G   E
Sbjct: 739 DITRAG-TYLFMIDEKHFSLEASTASLFLDLLSGGKYQE 776


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 169/532 (31%), Positives = 279/532 (52%), Gaps = 6/532 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  ++ +Y +     +  + F  ++  GL  ++   N +L  L+      +   IY  +
Sbjct: 186 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 245

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G++ NV+T NI++ ALCKN +++     L +M  KG  PD V+Y T++++ C+ G +
Sbjct: 246 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 305

Query: 152 EEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA EL     G G    V  YNA+INGLCK  K   A  +L EM+  G+ P+  TY+ +
Sbjct: 306 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 365

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C   N+  +  I  +M  +G  P++ SF++L+      G   +A   +  M   G 
Sbjct: 366 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 425

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+ V Y+ LI G C NG M EA+ V  +M E  C  +V TY+ +++G  K   L  A +
Sbjct: 426 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 485

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M   G  P+   +T ++    ++   ++A +L E M   N  P+ VT+NT I G C
Sbjct: 486 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 545

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
               ++   +L + M      PN  +Y  L++G   +  V EAF L  E+ + G +  I+
Sbjct: 546 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 605

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T NTI+ G CRAG  V+A + L  ML++G   D IT+N +I  + K+  ++ A  L++++
Sbjct: 606 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 665

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G   PD+I+Y  +L G    G MQEA + + KM+  G+ P+ +T+  L+
Sbjct: 666 ENSGLL-PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 253/515 (49%), Gaps = 31/515 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  +I+  +  L  M+ +GV      + ++IN+Y R GL E+A ++   +   G
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  YN I++ L    ++     +   M + GM P+  TYNILL   C+N+ +  A 
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++  EM ++G  PD VS++                              ALI  L K   
Sbjct: 380 RIFDEMPSQGVVPDLVSFS------------------------------ALIGLLSKNGC 409

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A     +M + G+ P+ + Y+ +I   C  G +  +L +  +M  +GC  ++ ++ +
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 469

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L G        EA +L+  M   G  P+   ++TLI+G   +G+M++AV++   M + +
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN 529

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V TY+ LIDGF K   +   +++WN MIS    PN ++Y  ++   C      +A 
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 589

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L ++M  +      +T NT +KG C  G    A + L  M     +P+  TYN L++G 
Sbjct: 590 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 649

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++   +  AF LV ++E  G+  +++TYN IL+G  R G + EA  ++ KM+  G   D 
Sbjct: 650 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 709

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            T+  +I  +  Q  +  A ++ D +   G + PD
Sbjct: 710 STYTSLINGHVTQNNLKEAFRVHDEMLQRG-FVPD 743



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 227/451 (50%), Gaps = 8/451 (1%)

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVY 168
           +RV+    L++  GN  C  + + +  +V +  +  ++ E  E      S      ++  
Sbjct: 165 SRVEIVESLVLTYGN--CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC 222

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N+L+ GL K   ++ A+ +  E+V  G+  NV T + +I++LC    +E +   L  M  
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +G  P++ ++ +L+  Y   G   EA +L + M  +G  P V  Y+ +I+GLC  G    
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  V  +M +    P+  TY+ L+    +  N++ A +I++ M S G  P++V+++ ++ 
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 402

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
           +L +N    QA      M      P+ V +   I G C  G +  A+K+ D+M +  C+ 
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ TYN +L+GL +   + EA EL TE+ + G+  +  T+ T+++G  + G + +A  L 
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M+    K D +T+N +I  +CK  ++    +L + +     + P+ ISY  L+ G CN
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY-PNHISYGILINGYCN 581

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            G + EAF    +M+ +G      T N +V+
Sbjct: 582 MGCVSEAFRLWDEMVEKGFEATIITCNTIVK 612



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 213/452 (47%), Gaps = 5/452 (1%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFG---SGVSVYNALINGLCKEHKIEEAFWLLC 189
           PDA +    +     + +VE    L + +G   S   V++ L+    +  K+ E      
Sbjct: 149 PDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFR 208

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +  +G+  ++   ++++  L  VG V+ +  I  ++   G   N+++   ++       
Sbjct: 209 VLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQ 268

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +        + M  +G  P+VV Y+TLI+  C  G ++EA  +   M      P V TY+
Sbjct: 269 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 328

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           A+I+G  K G  L A  + + M+  G SP+   Y  ++   C+N+    A  + ++M  +
Sbjct: 329 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 388

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ V+F+  I  L   G +D A+K    MK     P+   Y  L+ G  R   + EA
Sbjct: 389 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 448

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++  E+ + G  L++VTYNTIL+G+C+  M+ EA +L  +M   G   D  TF  +I  
Sbjct: 449 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 508

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           Y K G +N A+ L + +       PD+++Y +L+ G C    M++       M++  I P
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRN-LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 567

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           N  ++ +L+   + N+G +   + L D M  K
Sbjct: 568 NHISYGILING-YCNMGCVSEAFRLWDEMVEK 598


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 286/565 (50%), Gaps = 28/565 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M V   S    V +++  + R     + AL++   + E  +       + +L  L+
Sbjct: 136 LLEIMPVANSSAYNIVVVALCKAAR----VDDALELARTMSEKRIPLAAGSLDSVLVGLM 191

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +Y   +R   EP + T N+LL+  C   +VD A +LL  M ++ CAPD V
Sbjct: 192 DSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEV 248

Query: 137 SYTTIVSSICKLGQVEEA------RELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
           SY T++  +CK G+VEEA      REL     S  S      YN +I GLC+  +I+EA 
Sbjct: 249 SYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAV 308

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +  +M +R + P+  +Y  +I  L   G +  +  +  ++   G  P+  ++TSL+ G 
Sbjct: 309 QMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL 368

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            +     +A +L+  M R G  P+ V Y+ +I   C  G ++EA  +  +M E+   P+V
Sbjct: 369 CMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDV 428

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA------ 359
            TY+ ++DG  K+  +  A  ++N M   GC+PN  ++  ++  LCQ +   QA      
Sbjct: 429 VTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKL 488

Query: 360 ---HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
                L+++M  +   P+ VT++T I GLC   RVD A  LL+ M + +C P + T N L
Sbjct: 489 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 548

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + GL +  R+KEA E++  +   G   ++VTYNT++HG CRAG    A +LL  M+  G 
Sbjct: 549 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 608

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             + +T+  ++   CK  ++  A  +  +++  G   P++ +YT+L+ G C++G +    
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSG-CAPNLFTYTALILGFCSAGQVDGGL 667

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
               +M+  GI P+   +  L   L
Sbjct: 668 KLFGEMVCAGISPDHVVYGTLAAEL 692



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 169/621 (27%), Positives = 291/621 (46%), Gaps = 85/621 (13%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           +G+  +  +F SVI  +  VG   +A+K+F  + E    P   +YN ++D+L        
Sbjct: 4   QGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEA 62

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           +  +   M   G  P+ FT+  +L  LCK  ++D A  ++ EM ++   P   + + +  
Sbjct: 63  VKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAH 122

Query: 144 SICKLGQVEEAREL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI------ 196
            +C  G +E A +L  +   +  S YN ++  LCK  ++++A  L   M ++ I      
Sbjct: 123 ELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGS 182

Query: 197 --------------------------DPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
                                     +P ++T + ++   C  G V+ +  +L  M    
Sbjct: 183 LDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEE 242

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEA------SDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           C P+  S+ ++L G    GR  EA       +L +        P++  Y+ +I GLC N 
Sbjct: 243 CAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQND 302

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEAV +  +M E +  P+  +Y  LIDG AKAG L  A  ++ +++ +G +P+ VAYT
Sbjct: 303 RIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYT 362

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC  N F  A  L   M    CPP+ VT+N  I   C  G ++ A  L+ +M + 
Sbjct: 363 SLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED 422

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA------ 458
             +P++ TYN ++DGL + +RV+EA  L  E+E+ G   N  ++NTI+ G+C+       
Sbjct: 423 GHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA 482

Query: 459 ---GMVVEAFQLLGKMLIEGTKLDAITF-------------------------------- 483
              G + EAF+LL +M  +G   D +T+                                
Sbjct: 483 CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542

Query: 484 ---NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
              N +I+  CK G++  A ++LD +   G+ +PD+++Y +L+ G C +G  + A   L 
Sbjct: 543 VTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ-SPDVVTYNTLVHGHCRAGQTERARELLS 601

Query: 541 KMLNEGICPNFATWNVLVRSL 561
            M+  G+ PN  T+  LV  L
Sbjct: 602 DMVARGLAPNVVTYTALVSGL 622



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 159/599 (26%), Positives = 281/599 (46%), Gaps = 56/599 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++E    + ++D  + LL+ M  E  +  E  + +V++   + G  E+A+++F   RE  
Sbjct: 218 LLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD-RELP 276

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              +       L                              YNI++  LC+N+R+D A 
Sbjct: 277 SSSSSSSSPPSLRG----------------------------YNIVILGLCQNDRIDEAV 308

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
           ++  +M  +  +PD+ SY  ++  + K G++ +AR L  +   SGV+     Y +LI+GL
Sbjct: 309 QMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL 368

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C  +  ++A  L  +M  RG  P+ +TY+ +I + C  G +E +  ++ +M   G  P++
Sbjct: 369 CMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDV 428

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN---------GSM 286
            ++ +++ G     R  EA  L+N M R G  PN  +++T+I GLC           G +
Sbjct: 429 VTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKL 488

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           DEA  +  +M ++   P+V TYS LI G      +  A  +   M+   C P VV    +
Sbjct: 489 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 548

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+     +A  +++ M      P+ VT+NT + G C  G+ + A +LL  M     
Sbjct: 549 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 608

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ TY  L+ GL + NR+ EA  +  +++  G   N+ TY  ++ G C AG V    +
Sbjct: 609 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 668

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE------WNPDIISYT 520
           L G+M+  G   D + +  +    CK G+   A+++L   R G E      W  ++  Y 
Sbjct: 669 LFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL---REGRESLRSEAWGDEV--YR 723

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY-ILDDIM 578
             + G+  +G M+ A  +++ M+  G  P       LV  L  + G  G    +L++IM
Sbjct: 724 FAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKS-GQGGEARAVLEEIM 781



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/477 (21%), Positives = 188/477 (39%), Gaps = 110/477 (23%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILG-------------------------- 224
           M  +GI P  + ++++I   C+VG    ++ I                            
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQET 60

Query: 225 --------QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                    M  RGC P+  +FT++L G    G+  EA  + + M      P     S L
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 277 IHGLCSNGSM-------------------------------DEAVSVSYQMEENSCPPNV 305
            H LC  GSM                               D+A+ ++  M E   P   
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAA 180

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            +  +++ G   +G +  A Q++     N   P +V    +++  C      +A  L+  
Sbjct: 181 GSLDSVLVGLMDSGRIDEALQVYR---ENRREPCLVTLNVLLEGFCSRGQVDKARELLRA 237

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRV---------------------------------- 391
           M  E C P+ V++ T + GLC  GRV                                  
Sbjct: 238 MPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILG 297

Query: 392 -------DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
                  D A+++ ++M +    P+  +Y  L+DGL +  ++ +A  L  ++   G+  +
Sbjct: 298 LCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            V Y +++HG+C A    +A +L   M   G     +T+N++I A CK+G +  A  L+ 
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++   G   PD+++Y +++ G+C S  ++EA +   +M   G  PN  + N ++  L
Sbjct: 418 KMIEDGHV-PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGL 473


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  283 bits (725), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 270/535 (50%), Gaps = 31/535 (5%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  FYR+     +P+V  +   L +   + ++S +  + + M    +  NV++ NIL
Sbjct: 75  DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +  LC+ N VD +  +L +M   G  PDA+++                            
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITF---------------------------- 166

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
             NALINGLC E KI+EA  L  EMV RG +PNVI+Y+T+I+ LC  GN   ++ +  +M
Sbjct: 167 --NALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              GC PN+ ++++++         ++A +  + M+  G  PNV  Y++++HG C+ G +
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA  +  +M      PN  T++ L+DG  K G +  A  ++  M   G  P++  Y  +
Sbjct: 285 NEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL 344

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C   + ++A  + E M  + C P   ++N  I G C   R+D A  LL +M     
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+  TY+ L+ GL ++ R KEA  L  E+   G   N+VTY  +L G C+ G + EA +
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL  M  +  + + + + I+I      GK+  A +L  ++ G G   PDI +YT ++ G+
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG-TRPDIRTYTVMIKGL 523

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
              G   EA+   +KM ++G  PN  ++NV+++    N      + ++D+++  +
Sbjct: 524 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 578



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 232/457 (50%), Gaps = 5/457 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN   R+   + ++ +  ++ + G+ P    +N +++ L  E +      +++ M + G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            EPNV +Y  ++  LCK      A  +  +M   GC P+ V+Y+TI+ S+CK   V +A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 156 ELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E             V  YN++++G C   ++ EA  L  EMV R + PN +T++ ++  L
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G V  +  +   M  +G  P+I ++ +L+ GY L    +EA  ++  MIR+G  P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
            +Y+ LI+G C +  MDEA S+  +M   +  P+  TYS L+ G  + G    A  ++  
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M S G  PN+V Y  ++   C++    +A  L++ M  +   PN V +   I+G+   G+
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A +L  ++      P+I TY  ++ GLL+     EA++L  ++E  G   N  +YN 
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           ++ G  +      A +L+ +M+ +   ++  TF +++
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 208/391 (53%), Gaps = 5/391 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + +VIN   + G    A+ +F ++ + G KP V  Y+ I+D+L  +   +      S M 
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G+ PNVFTYN ++   C   +++ A +L  EM  +   P+ V++T +V  +CK G V 
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320

Query: 153 EAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EAR   E     G    +S YNAL++G C +  + EA  +   M+ +G  P   +Y+ +I
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C    ++ +  +L +M+ +  NP+  ++++L++G    GR  EA +L+  M   G  
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPH 440

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN+V Y  L+ G C +G +DEA+ +   M+E    PN+  Y+ LI+G   AG L  A ++
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++++  +G  P++  YT M+K L +  +  +A+ L  KM  +   PN+ ++N  I+G   
Sbjct: 501 FSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 560

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
                 A++L+D+M       N++T+  LLD
Sbjct: 561 NQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 211/420 (50%), Gaps = 42/420 (10%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITY-------------STIIS------------------- 208
           +++A      MV     P+V+ +             ST++S                   
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 209 ---SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
               LC + +V+ S+ +LG+MF  G +P+  +F +L+ G    G+  EA +L+N M++ G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNV++Y+T+I+GLC  G+   AV V  +ME+N C PNV TYS +ID   K   +  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +  + M+  G  PNV  Y  +V   C     ++A  L ++M   +  PNTVTF   + GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG--LLRV-NRVKEAFELVTEIEKCGIQ 442
           C  G V  A  + + M +    P+I+TYN L+DG  L R+ N  K+ FE++    + G  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI---RKGCA 370

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
               +YN +++G C++  + EA  LL +M  +    D +T++ ++   C+ G+   A+ L
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNL 430

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              +   G  +P++++Y  LL G C  G + EA   L+ M  + + PN   + +L+  +F
Sbjct: 431 FKEMCSYGP-HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 180/363 (49%), Gaps = 5/363 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++     L +M   G+  +   + S+++ +  +G   +A ++F  +    
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    +  ++D L  E   S    ++  M   G+EP++ TYN L+   C    ++ A 
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAK 358

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           K+   M  KGCAP A SY  +++  CK  +++EA+ L               Y+ L+ GL
Sbjct: 359 KVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGL 418

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  + +EA  L  EM   G  PN++TY  ++   C  G+++ +L +L  M  +   PNI
Sbjct: 419 CQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNI 478

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T L++G  + G+   A +L++++  +G  P++  Y+ +I GL   G  DEA  +  +
Sbjct: 479 VHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRK 538

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME++   PN  +Y+ +I GF +  +   A ++ + M+    S N+  +  ++ +  Q+ +
Sbjct: 539 MEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLESQDEI 598

Query: 356 FHQ 358
             Q
Sbjct: 599 ISQ 601



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 153/284 (53%), Gaps = 5/284 (1%)

Query: 279 GLCSNGS----MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           G  SN S    +D+A++  Y+M   +  P+V  +   +  FAK         + N+M   
Sbjct: 63  GFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLF 122

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
             + NV +   ++  LC+ N    + S++ KM      P+ +TFN  I GLC  G++  A
Sbjct: 123 RVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEA 182

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           ++L ++M +    PN+ +Y  +++GL +      A ++  ++E+ G + N+VTY+TI+  
Sbjct: 183 VELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDS 242

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+  +V +A + L +M+  G   +  T+N I++ +C  G++N A +L   +  G +  P
Sbjct: 243 LCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV-GRDVMP 301

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + +++T L+ G+C  G + EA +  + M  +G+ P+ +T+N L+
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALM 345


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 188/611 (30%), Positives = 302/611 (49%), Gaps = 46/611 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++G + L +QM   G+  S   F ++IN   + G   +A  +  +I ++ L P V  Y  
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++          +   ++  M ++G +PN  TY+ L+  LC   RVD A  +L EM  KG
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
             P   +YT  ++++C +   EEA EL  R         V  Y ALI+GL +  K+E A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  +M+  G+ PN +TY+ +I+ LC  G   T+L I   M   G   N  ++  ++KG 
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            LGG   +A  L+ +M++ G LP VV Y+TLI+G  + G+++ A  +   M+EN C P+ 
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478

Query: 306 TTYSALIDGFAKAGNLLGAS-----------------------------------QIWNR 330
            TY+ L+ GF+K G L  AS                                    +  R
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   GC+PNV +Y  ++  L + N F +A  + +KM  +   PN +T+ T I GLC  GR
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
             +A K+   M++ +CLPN+ TY+ L+ GL +  +  EA E ++EI   G +  + TY+T
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-ERMSEI---GCEPTLDTYST 654

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G+CR G   EA QL+  M   G   D   +  ++ A+CK  +V++A+++   I   G
Sbjct: 655 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 714

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGP 570
            +   +  Y +L+  +C +G ++EA      ML +    +   W VLV  L    G L  
Sbjct: 715 -FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE-GELDL 772

Query: 571 VYILDDIMANK 581
              L  IM +K
Sbjct: 773 CMKLLHIMESK 783



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 277/585 (47%), Gaps = 80/585 (13%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           +R+    P   I   ++ A   E     +    + +   G   ++++ N LL  L K   
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 178

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--------------------- 154
           V+GA  L  +M N G  P  +++ T+++ + K G+V EA                     
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 155 --------RELAMRFG-----------SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
                   R L + FG                Y+ LINGLC E +++EA  +L EM+++G
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I+P V TY+  I++LC + + E ++ ++ +M  RGC PN+ ++T+L+ G    G+   A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC-------------- 301
            L+++M++EG +PN V Y+ LI+ LC  G    A+ + + ME +                
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 302 --------------------P-PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                               P P V TY+ LI+G+   GN+  A+++ + M  NGC P+ 
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  +V    +      A    ++M      PN V++   I G    G+VD A+ LL +
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++  C PN+ +YN +++GL + NR  EA ++  ++ + G+  N++TY T++ G+CR G 
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
              AF++   M       +  T++ +IY  C++GK + A    +R+   G   P + +Y+
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIG-CEPTLDTYS 653

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           +L+ G+C  G   EA   ++ M   G CP+   +  L+ +   NL
Sbjct: 654 TLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 698



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 245/511 (47%), Gaps = 45/511 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +MK  G   +   + ++I+   R+G  E A+ +++++ + GL P    YN +++ L 
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              RFS    I+  M+  G   N  TYN ++K LC    ++ A  L  +M   G  P  V
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444

Query: 137 SYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T+++     G V  A R L +   +G       YN L++G  K  K+E A +   EM
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V+ G++PN ++Y+ +I      G V+ +L +L +M   GCNPN+ S+ +++ G     R 
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  + ++M+ +G LPNV+ Y+TLI GLC NG    A  + + ME+  C PN+ TYS+L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G  + G    A     RM   GC P +  Y+ +V  LC+   F++A  L++ M     
Sbjct: 625 IYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   + + +   C    VD A+K+                                  
Sbjct: 681 CPDREIYYSLLIAHCKNLEVDHALKIFHS------------------------------- 709

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
               IE  G QL++  Y  ++  +C+AG V EA  L   ML +    D I + +++    
Sbjct: 710 ----IEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 765

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           K+G+++  ++LL  I     + P+I +Y  L
Sbjct: 766 KEGELDLCMKLL-HIMESKNFTPNIQTYVIL 795



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 199/399 (49%), Gaps = 9/399 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E+A+ +F ++ + G  PTV  YN +++  L +   +    +   MK +G EP+ +TY
Sbjct: 422 GDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-- 161
           N L+    K  +++ A     EM   G  P+ VSYT ++    K G+V+ A  L  R   
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541

Query: 162 ---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                 V  YNA+INGL KE++  EA  +  +MV++G+ PNVITY+T+I  LC  G  + 
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  I   M  R C PN+++++SL+ G    G+  EA     RM   G  P +  YSTL+ 
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVS 657

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G   EA  +   M+E    P+   Y +L+    K   +  A +I++ + + G   
Sbjct: 658 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 717

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++  Y  ++  LC+     +A +L + M  +    + + +   + GL   G +D  MKLL
Sbjct: 718 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 777

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
             M+     PNI TY  L   L R+ +  E+  L  +++
Sbjct: 778 HIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 170/323 (52%), Gaps = 1/323 (0%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++   +  Q+M   G++ +   + ++I+ + + G  + AL +  R+ E G  P V+ YN
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  ENRFS    I   M   G+ PNV TY  L+  LC+N R   A+K+  +M  +
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
            C P+  +Y++++  +C+ G+ +EA  ++ +     +  Y+ L++GLC++ +  EA  L+
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLV 672

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M +RG  P+   Y +++ + C    V+ +L I   +  +G   ++  + +L+      
Sbjct: 673 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 732

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  EA  L++ M+ + +  + + ++ L+ GL   G +D  + + + ME  +  PN+ TY
Sbjct: 733 GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTY 792

Query: 309 SALIDGFAKAGNLLGASQIWNRM 331
             L    ++ G  + +  + +++
Sbjct: 793 VILGRELSRIGKSIESEPLADKL 815



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 173/395 (43%), Gaps = 34/395 (8%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K  ++    LL  MK  G    E  +  +++ + + G  E A   F  + E GL P    
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++D    + +  +   +   M+  G  PNV +YN ++  L K NR   A K+  +M 
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
            +G  P+ ++YTT+                              I+GLC+  + + AF +
Sbjct: 576 EQGLLPNVITYTTL------------------------------IDGLCRNGRTQFAFKI 605

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             +M  R   PN+ TYS++I  LC  G  + +     +M   GC P + ++++L+ G   
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCR 661

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            GR +EA  L   M   GF P+   Y +L+   C N  +D A+ + + +E      +++ 
Sbjct: 662 KGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSI 721

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y ALI    KAG +  A  +++ M+    + + + +T +V  L +         L+  M 
Sbjct: 722 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 781

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            +N  PN  T+    + L   G+   +  L D++K
Sbjct: 782 SKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 816



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 70/158 (44%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L  K      + L++ MK  G      ++ S++ ++ +    + ALK+F+ I   G
Sbjct: 655 LVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 714

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +  + IY  ++ AL    +      ++ NM       +   + +L+  L K   +D   
Sbjct: 715 FQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCM 774

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           KLL  M +K   P+  +Y  +   + ++G+  E+  LA
Sbjct: 775 KLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLA 812


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 169/532 (31%), Positives = 279/532 (52%), Gaps = 6/532 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  ++ +Y +     +  + F  ++  GL  ++   N +L  L+      +   IY  +
Sbjct: 290 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV 349

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G++ NV+T NI++ ALCKN +++     L +M  KG  PD V+Y T++++ C+ G +
Sbjct: 350 VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLL 409

Query: 152 EEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA EL     G G    V  YNA+INGLCK  K   A  +L EM+  G+ P+  TY+ +
Sbjct: 410 EEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNIL 469

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C   N+  +  I  +M  +G  P++ SF++L+      G   +A   +  M   G 
Sbjct: 470 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 529

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+ V Y+ LI G C NG M EA+ V  +M E  C  +V TY+ +++G  K   L  A +
Sbjct: 530 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADE 589

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M   G  P+   +T ++    ++   ++A +L E M   N  P+ VT+NT I G C
Sbjct: 590 LFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 649

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
               ++   +L + M      PN  +Y  L++G   +  V EAF L  E+ + G +  I+
Sbjct: 650 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 709

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T NTI+ G CRAG  V+A + L  ML++G   D IT+N +I  + K+  ++ A  L++++
Sbjct: 710 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 769

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G   PD+I+Y  +L G    G MQEA + + KM+  G+ P+ +T+  L+
Sbjct: 770 ENSGLL-PDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/515 (28%), Positives = 253/515 (49%), Gaps = 31/515 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  +I+  +  L  M+ +GV      + ++IN+Y R GL E+A ++   +   G
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  YN I++ L    ++     +   M + GM P+  TYNILL   C+N+ +  A 
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++  EM ++G  PD VS++                              ALI  L K   
Sbjct: 484 RIFDEMPSQGVVPDLVSFS------------------------------ALIGLLSKNGC 513

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A     +M + G+ P+ + Y+ +I   C  G +  +L +  +M  +GC  ++ ++ +
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNT 573

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L G        EA +L+  M   G  P+   ++TLI+G   +G+M++AV++   M + +
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN 633

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V TY+ LIDGF K   +   +++WN MIS    PN ++Y  ++   C      +A 
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 693

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L ++M  +      +T NT +KG C  G    A + L  M     +P+  TYN L++G 
Sbjct: 694 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 753

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++   +  AF LV ++E  G+  +++TYN IL+G  R G + EA  ++ KM+  G   D 
Sbjct: 754 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 813

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            T+  +I  +  Q  +  A ++ D +   G + PD
Sbjct: 814 STYTSLINGHVTQNNLKEAFRVHDEMLQRG-FVPD 847



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 226/451 (50%), Gaps = 8/451 (1%)

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVY 168
           +RV+    L++  GN  C  + + +  +V +  +  ++ E  E      S      ++  
Sbjct: 269 SRVEIVESLVLTYGN--CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINAC 326

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N+L+ GL K   ++ A+ +  E+V  G+  NV T + +I++LC    +E +   L  M  
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +G  P++ ++ +L+  Y   G   EA +L + M  +G  P V  Y+ +I+GLC  G    
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  V  +M +    P+  TY+ L+    +  N++ A +I++ M S G  P++V+++ ++ 
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 506

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
           +L +N    QA      M      P+ V +   I G C  G +  A+K+ D+M +  C  
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ TYN +L+GL +   + EA EL TE+ + G+  +  T+ T+++G  + G + +A  L 
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M+    K D +T+N +I  +CK  ++    +L + +     + P+ ISY  L+ G CN
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY-PNHISYGILINGYCN 685

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            G + EAF    +M+ +G      T N +V+
Sbjct: 686 MGCVSEAFRLWDEMVEKGFEATIITCNTIVK 716



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 213/452 (47%), Gaps = 5/452 (1%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFG---SGVSVYNALINGLCKEHKIEEAFWLLC 189
           PDA +    +     + +VE    L + +G   S   V++ L+    +  K+ E      
Sbjct: 253 PDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFR 312

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +  +G+  ++   ++++  L  VG V+ +  I  ++   G   N+++   ++       
Sbjct: 313 VLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQ 372

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +        + M  +G  P+VV Y+TLI+  C  G ++EA  +   M      P V TY+
Sbjct: 373 KIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYN 432

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           A+I+G  K G  L A  + + M+  G SP+   Y  ++   C+N+    A  + ++M  +
Sbjct: 433 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQ 492

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ V+F+  I  L   G +D A+K    MK     P+   Y  L+ G  R   + EA
Sbjct: 493 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 552

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++  E+ + G  L++VTYNTIL+G+C+  M+ EA +L  +M   G   D  TF  +I  
Sbjct: 553 LKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 612

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           Y K G +N A+ L + +       PD+++Y +L+ G C    M++       M++  I P
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRN-LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 671

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           N  ++ +L+   + N+G +   + L D M  K
Sbjct: 672 NHISYGILING-YCNMGCVSEAFRLWDEMVEK 702


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 173/542 (31%), Positives = 274/542 (50%), Gaps = 45/542 (8%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 92  CTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 144

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTT 140
            ++ +   M + G  PNVF+YNILLK LC  NR   A +LL  M + G  C PD VSYTT
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +                              ING  KE  +++A+    EM+DRGI PNV
Sbjct: 205 V------------------------------INGFFKEGDLDKAYGTYHEMLDRGILPNV 234

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TYS+II++LC    ++ ++ +L  M   G  PN  ++ S++ GY   G+  EA     +
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P+VV Y++L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+    + + M+ NG  PN   ++ ++    +     QA  +  KM  +   P+TVT+ T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GRV+ AM+  +QM      P    YN L+  L   ++  +A EL+ E+   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I L+ + +N+I+   C+ G V+E+ +L   M+  G K D IT++ +I  YC  GK++ A 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +LL  +   G   PD ++Y +L+ G C    M++A +  ++M + G+ P+  T+N++++ 
Sbjct: 535 KLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593

Query: 561 LF 562
           LF
Sbjct: 594 LF 595



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 269/553 (48%), Gaps = 8/553 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LLQ M  +G  C   V  + +VIN + + G  ++A   ++ + + G+ P V  Y+ I+ A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           + ++M ++G+ PN  TYN ++   C + +   A   L +M + G  PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y +++  +CK G+  EAR++            ++ Y  L+ G   +  + E   LL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  GI PN   +S +I +    G V+ ++ +  +M  +G NP+  ++ +++      G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A   + +MI E   P  + Y++LIH LC     D+A  +  +M +     +   ++
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++ID   K G ++ + ++++ M+  G  P+++ Y+ ++   C      +A  L+  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT+NT I G C   R++ A+ L  +M+     P+I TYN +L GL +  R   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   I + G QL + TYN ILHG+C+  +  EA ++   + +   +L+  TFNI+I A
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             K G+ + A  L   +   G   PD+ +Y+ +   +   G ++E       M   G   
Sbjct: 664 LLKVGRNDEAKDLFAALSANG-LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 550 NFATWNVLVRSLF 562
           N    N +VR L 
Sbjct: 723 NSRMLNSIVRKLL 735



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 257/518 (49%), Gaps = 8/518 (1%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME--PNVFTYNILLKA 109
           +  R+ + G  P V  YN +L  L  ENR      +   M  DG +  P+V +Y  ++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV--- 165
             K   +D AY    EM ++G  P+ V+Y++I++++CK   +++A E L     +GV   
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 166 -SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +  +  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M  RG  P I ++ +LL+GY   G   E   L + M+R G  PN   +S LI      G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D+A+ V  +M +    P+  TY  +I    K+G +  A + + +MI    SP  + Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC  + + +A  LI +M       +T+ FN+ I   C  GRV  + KL D M + 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P+I TY+ L+DG     ++ EA +L+  +   G++ + VTYNT+++G C+   + +A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L  +M   G   D IT+NII+    +  +   A +L   I   G    ++ +Y  +L 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT-QLELSTYNIILH 627

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G+C +    EA    Q +    +     T+N+++ +L 
Sbjct: 628 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 220/422 (52%), Gaps = 13/422 (3%)

Query: 151 VEEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVIT 202
            E+AR +    +R G G S+Y  N  +  + + H    A      M   G D   PN+ T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y  +I S C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCPPNVTTYSALIDGFAKAG 319
            + G +PNV +Y+ L+ GLC      EA+ +   M ++   CPP+V +Y+ +I+GF K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L  A   ++ M+  G  PNVV Y+ ++  LC+     +A  ++  M      PN  T+N
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M      P++ TYN L+D L +  R  EA ++   + K 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   +   F+I+I AY KQGKV+ A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NPD ++Y +++  +C SG +++A  Y ++M++E + P    +N L+ 
Sbjct: 394 MLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 560 SL 561
           SL
Sbjct: 453 SL 454



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 232/453 (51%), Gaps = 5/453 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L++M  +GV      + S+++   + G   +A KMF  + + GLKP +  Y  +L    
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA 350

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +     ++ +   M R+G+ PN + ++IL+ A  K  +VD A  +  +M  +G  PD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +CK G+VE+A     + +  R   G  VYN+LI+ LC   K ++A  L+ EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +DRGI  + I +++II S C  G V  S  +   M   G  P+I ++++L+ GY L G+ 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L   M+  G  P+ V Y+TLI+G C    M++A+ +  +ME +   P++ TY+ +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +      A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   + 
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              T TFN  I  L   GR D A  L   +     +P++ TY+ + + L+    ++E  +
Sbjct: 651 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 710

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           L   +E+ G   N    N+I+  + + G +  A
Sbjct: 711 LFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 187/411 (45%), Gaps = 40/411 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G+  +  VF  +I +Y + G  +QA+ +F ++R+ GL P    Y  ++  L 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R       +  M  + + P    YN L+ +LC  ++ D A +L++EM ++G   D +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            + +I+ S CK G+V E+    +L +R G    +  Y+ LI+G C   K++EA  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G+ P+ +TY+T+I+  C +  +E +L +  +M   G +P+I ++  +L+G     RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSN---------------------------- 283
             A +L+  +   G    +  Y+ ++HGLC N                            
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 284 -------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                  G  DEA  +   +  N   P+V TYS + +   + G L     ++  M  NGC
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           + N      +V+ L Q     +A + +  +  ++      T + F+  L G
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +PN+  Y  ++   C         + +  +  +    + + F   +KG
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--I 441
           LC   R   AM + L +M Q  C+PN+ +YN LL GL   NR +EA EL+  +   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++V+Y T+++G  + G + +A+    +ML  G   + +T++ II A CK   ++ A++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +   G   P+  +Y S++ G C+SG  +EA  +L+KM ++G+ P+  T+N L+  L
Sbjct: 256 VLTSMVKNGVM-PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 562 FSN 564
             N
Sbjct: 315 CKN 317



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 164/393 (41%), Gaps = 44/393 (11%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G+      F S+I+S+ + G   ++ K+F  +   G+KP +  Y+ +
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D      +      + ++M   GM+P+  TYN L+   CK +R++ A  L  EM + G 
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFW 186
           +PD ++Y  I+  + +  +   A+EL +          +S YN +++GLCK +  +EA  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +   +    +     T++ +I +L  VG                                
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVG-------------------------------- 668

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              R  EA DL+  +   G +P+V  YS +   L   G ++E   +   MEEN C  N  
Sbjct: 669 ---RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
             ++++    + G++  A   +  MI         +   +   L     + + HS I   
Sbjct: 726 MLNSIVRKLLQRGDITRAG-TYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHSCIRGG 784

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            F  C  + V  N  +    G   V + +KLL+
Sbjct: 785 IFSLCVNSEVQENHLLDSESG---VHFLLKLLN 814



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 31/279 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL  M   G+      + ++IN Y ++   E AL +F  +   G+ P +  YN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L    R +    +Y  +   G +  + TYNI+L  LCKNN  D A ++   +   
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL--- 645

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            C  D               Q+E               +N +I  L K  + +EA  L  
Sbjct: 646 -CLTDL--------------QLE------------TRTFNIMIGALLKVGRNDEAKDLFA 678

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +   G+ P+V TYS +  +L + G +E    +   M   GC  N     S+++  L  G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               A   +  MI E       + ++L   L S G   E
Sbjct: 739 DITRAG-TYLFMIDEKHFSLEASTASLFLDLLSGGKYQE 776


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 173/542 (31%), Positives = 274/542 (50%), Gaps = 45/542 (8%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 92  CTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 144

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTT 140
            ++ +   M + G  PNVF+YNILLK LC  NR   A +LL  M + G  C PD VSYTT
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +                              ING  KE  +++A+    EM+DRGI PNV
Sbjct: 205 V------------------------------INGFFKEGDLDKAYGTYHEMLDRGILPNV 234

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TYS+II++LC    ++ ++ +L  M   G  PN  ++ S++ GY   G+  EA     +
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P+VV Y++L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+    + + M+ NG  PN   ++ ++    +     QA  +  KM  +   P+TVT+ T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GRV+ AM+  +QM      P    YN L+  L   ++  +A EL+ E+   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I L+ + +N+I+   C+ G V+E+ +L   M+  G K D IT++ +I  YC  GK++ A 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +LL  +   G   PD ++Y +L+ G C    M++A +  ++M + G+ P+  T+N++++ 
Sbjct: 535 KLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593

Query: 561 LF 562
           LF
Sbjct: 594 LF 595



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 269/553 (48%), Gaps = 8/553 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LLQ M  +G  C   V  + +VIN + + G  ++A   ++ + + G+ P V  Y+ I+ A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           + ++M ++G+ PN  TYN ++   C + +   A   L +M + G  PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y +++  +CK G+  EAR++            ++ Y  L+ G   +  + E   LL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  GI PN   +S +I +    G V+ ++ +  +M  +G NP+  ++ +++      G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A   + +MI E   P  + Y++LIH LC     D+A  +  +M +     +   ++
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++ID   K G ++ + ++++ M+  G  P+++ Y+ ++   C      +A  L+  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT+NT I G C   R++ A+ L  +M+     P+I TYN +L GL +  R   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   I + G QL + TYN ILHG+C+  +  EA ++   + +   +L+  TFNI+I A
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             K G+ + A  L   +   G   PD+ +Y+ +   +   G ++E       M   G   
Sbjct: 664 LLKVGRNDEAKDLFAALSANG-LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 550 NFATWNVLVRSLF 562
           N    N +VR L 
Sbjct: 723 NSRMLNSIVRKLL 735



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 257/518 (49%), Gaps = 8/518 (1%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME--PNVFTYNILLKA 109
           +  R+ + G  P V  YN +L  L  ENR      +   M  DG +  P+V +Y  ++  
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVING 208

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV--- 165
             K   +D AY    EM ++G  P+ V+Y++I++++CK   +++A E L     +GV   
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268

Query: 166 -SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +  +  
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M  RG  P I ++ +LL+GY   G   E   L + M+R G  PN   +S LI      G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D+A+ V  +M +    P+  TY  +I    K+G +  A + + +MI    SP  + Y 
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC  + + +A  LI +M       +T+ FN+ I   C  GRV  + KL D M + 
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P+I TY+ L+DG     ++ EA +L+  +   G++ + VTYNT+++G C+   + +A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L  +M   G   D IT+NII+    +  +   A +L   I   G    ++ +Y  +L 
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT-QLELSTYNIILH 627

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G+C +    EA    Q +    +     T+N+++ +L 
Sbjct: 628 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 220/422 (52%), Gaps = 13/422 (3%)

Query: 151 VEEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVIT 202
            E+AR +    +R G G S+Y  N  +  + + H    A      M   G D   PN+ T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y  +I S C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCPPNVTTYSALIDGFAKAG 319
            + G +PNV +Y+ L+ GLC      EA+ +   M ++   CPP+V +Y+ +I+GF K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L  A   ++ M+  G  PNVV Y+ ++  LC+     +A  ++  M      PN  T+N
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M      P++ TYN L+D L +  R  EA ++   + K 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   +   F+I+I AY KQGKV+ A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NPD ++Y +++  +C SG +++A  Y ++M++E + P    +N L+ 
Sbjct: 394 MLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 560 SL 561
           SL
Sbjct: 453 SL 454



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 232/453 (51%), Gaps = 5/453 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L++M  +GV      + S+++   + G   +A KMF  + + GLKP +  Y  +L    
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA 350

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +     ++ +   M R+G+ PN + ++IL+ A  K  +VD A  +  +M  +G  PD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +CK G+VE+A     + +  R   G  VYN+LI+ LC   K ++A  L+ EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +DRGI  + I +++II S C  G V  S  +   M   G  P+I ++++L+ GY L G+ 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L   M+  G  P+ V Y+TLI+G C    M++A+ +  +ME +   P++ TY+ +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +      A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   + 
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              T TFN  I  L   GR D A  L   +     +P++ TY+ + + L+    ++E  +
Sbjct: 651 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 710

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           L   +E+ G   N    N+I+  + + G +  A
Sbjct: 711 LFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 187/411 (45%), Gaps = 40/411 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G+  +  VF  +I +Y + G  +QA+ +F ++R+ GL P    Y  ++  L 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R       +  M  + + P    YN L+ +LC  ++ D A +L++EM ++G   D +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            + +I+ S CK G+V E+    +L +R G    +  Y+ LI+G C   K++EA  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G+ P+ +TY+T+I+  C +  +E +L +  +M   G +P+I ++  +L+G     RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSN---------------------------- 283
             A +L+  +   G    +  Y+ ++HGLC N                            
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 284 -------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                  G  DEA  +   +  N   P+V TYS + +   + G L     ++  M  NGC
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           + N      +V+ L Q     +A + +  +  ++      T + F+  L G
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSG 771



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +PN+  Y  ++   C         + +  +  +    + + F   +KG
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--I 441
           LC   R   AM + L +M Q  C+PN+ +YN LL GL   NR +EA EL+  +   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++V+Y T+++G  + G + +A+    +ML  G   + +T++ II A CK   ++ A++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +   G   P+  +Y S++ G C+SG  +EA  +L+KM ++G+ P+  T+N L+  L
Sbjct: 256 VLTSMVKNGVM-PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 562 FSN 564
             N
Sbjct: 315 CKN 317



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/393 (22%), Positives = 164/393 (41%), Gaps = 44/393 (11%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G+      F S+I+S+ + G   ++ K+F  +   G+KP +  Y+ +
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D      +      + ++M   GM+P+  TYN L+   CK +R++ A  L  EM + G 
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFW 186
           +PD ++Y  I+  + +  +   A+EL +          +S YN +++GLCK +  +EA  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +   +    +     T++ +I +L  VG                                
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVG-------------------------------- 668

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              R  EA DL+  +   G +P+V  YS +   L   G ++E   +   MEEN C  N  
Sbjct: 669 ---RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
             ++++    + G++  A      +     S      +  + +L     + + HS I   
Sbjct: 726 MLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL-SGGKYQEYHSCIRGG 784

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            F  C  + V  N  +    G   V + +KLL+
Sbjct: 785 IFSLCVNSEVQENHLLDSESG---VHFLLKLLN 814



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 31/279 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL  M   G+      + ++IN Y ++   E AL +F  +   G+ P +  YN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L    R +    +Y  +   G +  + TYNI+L  LCKNN  D A ++   +   
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL--- 645

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            C  D               Q+E               +N +I  L K  + +EA  L  
Sbjct: 646 -CLTDL--------------QLE------------TRTFNIMIGALLKVGRNDEAKDLFA 678

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +   G+ P+V TYS +  +L + G +E    +   M   GC  N     S+++  L  G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               A   +  MI E       + ++L   L S G   E
Sbjct: 739 DITRAG-TYLFMIDEKHFSLEASTASLFLDLLSGGKYQE 776


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 181/571 (31%), Positives = 296/571 (51%), Gaps = 7/571 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++G + L +QM   G+  S   F ++IN   + G   +A  +  +I ++ L P V  Y  
Sbjct: 221 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 280

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++          +   ++  M ++G +PN  TY+ L+  LC   RVD A  +L EM  KG
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 340

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
             P   +YT  ++++C +   EEA EL  R         V  Y ALI+GL +  K+E A 
Sbjct: 341 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 400

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  +M+  G+ PN +TY+ +I+ LC  G   T+L I   M   G   N  ++  ++KG 
Sbjct: 401 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 460

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            LGG   +A  L+ +M++ G LP VV Y+TLI+G  + G+++ A  +   M+EN C P+ 
Sbjct: 461 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ L+ GF+K G L  AS  +  M+  G +PN V+YT ++    ++     A SL+E+
Sbjct: 521 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLER 580

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M    C PN  ++N  I GL    R   A K+ D+M +   LPN+ TY  L+DGL R  R
Sbjct: 581 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGR 640

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            + AF++  ++EK     N+ TY+++++G+C+ G   EA  LL +M  +G   D +TF  
Sbjct: 641 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 700

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  +   G++++A  LL R+   G   P+  +Y+ LL G+     + E  + +Q     
Sbjct: 701 LIDGFVVLGRIDHAFLLLRRMVDVG-CKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVY 759

Query: 546 GICPNFATWNV-LVRSLFSNLGHLGPVYILD 575
              P+    N  +V +L + +  +G    LD
Sbjct: 760 SFSPHEKDVNFEIVSNLLARMSEIGCEPTLD 790



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 284/525 (54%), Gaps = 6/525 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           +  + E A  ++ ++   G++P++  +N +++ L  + +      I S + +  + P+VF
Sbjct: 217 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF 276

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TY  L+   C+N  +D A+ +   M  +GC P++V+Y+T+++ +C  G+V+EA ++    
Sbjct: 277 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y   I  LC     EEA  L+  M  RG  PNV TY+ +IS L  +G +
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 396

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E ++G+  +M   G  PN  ++ +L+    +GGR   A  +++ M   G L N   Y+ +
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 456

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLC  G +++A+ +  +M +    P V TY+ LI+G+   GN+  A+++ + M  NGC
Sbjct: 457 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 516

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+   Y  +V    +      A    ++M      PN V++ T I G    G+VD A+ 
Sbjct: 517 EPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALS 576

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL++M++  C PN+ +YN +++GL + NR  EA ++  ++ + G+  N++TY T++ G+C
Sbjct: 577 LLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLC 636

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           R G    AF++   M       +  T++ +IY  C++GK + A  LL  +   G   PD 
Sbjct: 637 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG-LAPDE 695

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +++TSL+ G    G +  AF+ L++M++ G  PN+ T++VL++ L
Sbjct: 696 VTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 181/643 (28%), Positives = 290/643 (45%), Gaps = 98/643 (15%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +M  EG   +   + ++IN     G  ++AL M   + E G++PTV  Y   + AL 
Sbjct: 297 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           A         + + MK+ G  PNV TY  L+  L +  +++ A  L  +M  +G  P+ V
Sbjct: 357 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 416

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +C  G+   A ++     G G       YN +I GLC    IE+A  L  +M
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +  G  P V+TY+T+I+     GNV  +  +L  M   GC P+  ++  L+ G+   G+ 
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             AS  +  M+  G  PN V+Y+TLI G   +G +D A+S+  +MEE  C PNV +Y+A+
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN-------NMFH------- 357
           I+G +K      A +I ++M   G  PNV+ YT ++  LC+N        +FH       
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656

Query: 358 ---------------------QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
                                +A  L+++M  +   P+ VTF + I G    GR+D A  
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 716

Query: 397 LLDQMKQYECLPNITTYNELLDGLLR--------VNRVKEA------------FELVT-- 434
           LL +M    C PN  TY+ LL GL +        V    EA            FE+V+  
Sbjct: 717 LLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNL 776

Query: 435 --EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + + G +  + TY+T++ G+CR G   EA QL+  M   G   D   +  ++ A+CK
Sbjct: 777 LARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 836

Query: 493 QGKVNNAIQLLDRIRGGG----------------------------------EWNPDIIS 518
             +V++A+++   I   G                                  EWN D I 
Sbjct: 837 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 896

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +T L+ G+   G +      L  M ++   PN  T+ +L R L
Sbjct: 897 WTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 939



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/402 (33%), Positives = 212/402 (52%), Gaps = 3/402 (0%)

Query: 162 GSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G G S+Y  N L+  L K   +E A  L  +M++ GI P+++T++T+I+ L   G V  +
Sbjct: 200 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 259

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             IL Q+F    +P++ ++TSL+ G+        A  +++RM++EG  PN V YSTLI+G
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 319

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC+ G +DEA+ +  +M E    P V TY+  I       +   A ++  RM   GC PN
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++  L +      A  L  KM  E   PNTVT+N  I  LC  GR   A+K+  
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M+ +  L N  TYNE++ GL     +++A  L  ++ K G    +VTYNT+++G    G
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 499

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            V  A +LL  M   G + D  T+N ++  + K GK+ +A      +   G  NP+ +SY
Sbjct: 500 NVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECG-LNPNPVSY 558

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           T+L+ G    G +  A   L++M   G  PN  ++N ++  L
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 189/398 (47%), Gaps = 1/398 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F     +   +I     E +I      L E+   G   ++ + +T++  L     VE + 
Sbjct: 166 FAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGAR 225

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM   G  P++ +F +L+      G+  EA  + +++ +    P+V  Y++LI G 
Sbjct: 226 NLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGH 285

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C N ++D A  V  +M +  C PN  TYS LI+G    G +  A  +   MI  G  P V
Sbjct: 286 CRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTV 345

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             YT  +  LC      +A  L+ +M    C PN  T+   I GL   G+++ A+ L  +
Sbjct: 346 YTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHK 405

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +   +PN  TYN L++ L    R   A ++   +E  G   N  TYN I+ G+C  G 
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGD 465

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A  L  KML  G     +T+N +I  Y  +G VNNA +LLD ++  G   PD  +Y 
Sbjct: 466 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG-CEPDEWTYN 524

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            L+ G    G ++ A  Y Q+M+  G+ PN  ++  L+
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLI 562



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 215/459 (46%), Gaps = 29/459 (6%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K  ++    LL  MK  G    E  +  +++ + + G  E A   F  + E GL P    
Sbjct: 498 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 557

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++D    + +  +   +   M+  G  PNV +YN ++  L K NR   A K+  +M 
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
            +G  P+ ++YTT++  +C+ G+ + A ++       +    +  Y++LI GLC+E K +
Sbjct: 618 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 677

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  LL EM  +G+ P+ +T++++I     +G ++ +  +L +M   GC PN  +++ LL
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737

Query: 243 KG-----YLLGGRT---HEA----------------SDLWNRMIREGFLPNVVAYSTLIH 278
           KG      LL  +    HEA                S+L  RM   G  P +  YSTL+ 
Sbjct: 738 KGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G   EA  +   M+E    P+   Y +L+    K   +  A +I++ + + G   
Sbjct: 798 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 857

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++  Y  ++  LC+     +A +L + M  +    + + +   + GL   G +D  MKLL
Sbjct: 858 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 917

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
             M+     PNI TY  L   L R+ +  E+  L  +++
Sbjct: 918 HIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 276/533 (51%), Gaps = 15/533 (2%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           SY   GL E A+ +F  +      P+V  +N ++ A++   R  ++  +Y  M+R  +  
Sbjct: 56  SYEIKGL-EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           +++++ IL+K  C  +++  A     ++   G  PD V++TT++  +C   +V EA +L 
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 159 MRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +     V  +  L+NGLC+E ++ EA  LL  MV+ G+ P+ ITY T +  +C +G+  
Sbjct: 175 HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 218 TSLGILGQM-FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           ++L +L +M  +    PN+  +++++ G    GR  ++ +L+  M  +G  PN+V Y+ +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C +G    A  +  +M E    PNV TY+ALI+ F K G    A+++++ M+  G 
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN + Y  M+   C+ +    A  +   MA + C P+  TF T I G CG  R+D  M+
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +M +   + N  TYN L+ G   V  +  A +L  ++   G+  +IVT NT+L G+C
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 457 RAGMVVEAFQLLGKML-----------IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             G + +A ++   M              G + D +T+NI+I     +GK   A +L + 
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +   G   PD I+Y+S++ G+C    + EA      M ++   PN  T+N L+
Sbjct: 535 MPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 164/583 (28%), Positives = 290/583 (49%), Gaps = 22/583 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F ++ + GL P V  +  +
Sbjct: 98  DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTL 157

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  ++R S    ++  + R    P+V T+  L+  LC+  RV  A  LL  M   G 
Sbjct: 158 LHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGL 213

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEEAF 185
            PD ++Y T V  +CK+G    A  L  +          V +Y+A+I+GLCK+ +  ++ 
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM D+GI PN++TY+ +I   C  G    +  +L +M  R  +PN+ ++ +L+  +
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA++L++ M+  G +PN + Y+++I G C    +D A  + Y M    C P+V
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   N V Y  ++   C     + A  L ++
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT NT + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               + +TFN +I  YCK G+V++ ++L   + G      D I Y +L++G    G +  
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEM-GRRGIVADAIIYITLIYGFRKVGNING 632

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           A    Q+M++ G+ P+  T   ++   +S       V +L+D+
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 249/493 (50%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+P    Y   +D +    +  S +N +   
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   ++PNV  Y+ ++  LCK+ R   ++ L +EM +KG  P+ V+Y  ++   C  G+
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
              A+ L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITY++
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 363

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+P++ +FT+L+ GY    R  +  +L + M R G
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + N V Y+TLIHG C  G ++ A+ +S QM  +   P++ T + L+DG    G L  A 
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V+ Y  ++  L     F +A  L E+M      P+
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++   M      PN+ T+N L++G  +  RV +  EL  
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 603

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  + + Y T+++G  + G +  A  +  +M+  G   D IT   ++  +  + 
Sbjct: 604 EMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE 663

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L+ ++
Sbjct: 664 ELERAVAMLEDLQ 676



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 212/399 (53%), Gaps = 8/399 (2%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L+  + +  + +    L  +M  + I  ++ +++ +I   C    +  +L   G++ 
Sbjct: 84  FNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G +P++ +FT+LL G  L  R  EA DL++++ R    P+V+ ++TL++GLC  G + 
Sbjct: 144 KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVV 199

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM--ISNGCSPNVVAYTC 345
           EAV++  +M EN   P+  TY   +DG  K G+ + A  +  +M  IS+   PNVV Y+ 
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH-IKPNVVIYSA 258

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC++     +H+L  +M  +   PN VT+N  I G C  GR   A +LL +M + +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             PN+ TYN L++  ++  +  EA EL  E+   GI  N +TYN+++ G C+   +  A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +   M  +G   D  TF  +I  YC   ++++ ++LL  +   G    + ++Y +L+ G
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG-LVANTVTYNTLIHG 437

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            C  G +  A    Q+M++ G+CP+  T N L+  L  N
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 194/402 (48%), Gaps = 16/402 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+ +G+  +   +  +I  +   G    A ++   + E  + P V  YN +++A +
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +F     +Y  M   G+ PN  TYN ++   CK +R+D A  +   M  KGC+PD  
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394

Query: 137 SYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++TT++   C   ++++  EL     R G  +    YN LI+G C    +  A  L  +M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-----------VRGCNPNIHSFTS 240
           +  G+ P+++T +T++  LCD G ++ +L +   M              G  P++ ++  
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC    +DEA  +   M   S
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV T++ LI+G+ KAG +    +++  M   G   + + Y  ++    +    + A 
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            + ++M      P+T+T    + G      ++ A+ +L+ ++
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 141/322 (43%), Gaps = 24/322 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+   ++  +D  + +   M  +G S     F ++I+ Y      +  +++ + +   G
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      YN ++         +    +   M   G+ P++ T N LL  LC N ++  A 
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483

Query: 121 KLLVEMGNK-----------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SG 164
           ++   M              G  PD ++Y  ++  +   G+  EA EL            
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              Y+++I+GLCK+ +++EA  +   M  +   PNV+T++T+I+  C  G V+  L +  
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 603

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RG   +   + +L+ G+   G  + A D++  MI  G  P+ +    ++ G  S  
Sbjct: 604 EMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE 663

Query: 285 SMDEAV--------SVSYQMEE 298
            ++ AV        SV YQ+E+
Sbjct: 664 ELERAVAMLEDLQMSVGYQLED 685


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 170/578 (29%), Positives = 281/578 (48%), Gaps = 43/578 (7%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           G+Q L+ +M   G S +E     +++  R+ G  + A ++  ++  FG  P + +YN ++
Sbjct: 314 GIQ-LMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALI 372

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD--------------- 117
           ++L           +YSNM    + PN  TY+IL+ + C++ R+D               
Sbjct: 373 NSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIG 432

Query: 118 --------------------GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
                                A  L +EM NKG  P A ++T+++S  CK  QV++A +L
Sbjct: 433 ETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKL 492

Query: 158 AMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             +         V  + ALI+GLC  +K+ EA  L  E+V+R I P  +TY+ +I   C 
Sbjct: 493 YNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCR 552

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G ++ +  +L  M  +G  P+ +++  L+ G    GR  +A D  + + ++    N + 
Sbjct: 553 DGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMC 612

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS L+HG C  G + EA+S S +M +     ++  ++ LIDG  K  +      +   M 
Sbjct: 613 YSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMH 672

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G  P+ V YT M+    +   F +A    + M  E C PN VT+   + GLC  G +D
Sbjct: 673 DQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMD 732

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  L  +M+     PN  TY   LD L +   +KEA  L   + K G+  N VT+N I+
Sbjct: 733 RAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIII 791

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G C+ G   EA ++L +M   G   D +T++ +IY YC+ G V  +++L D +   G  
Sbjct: 792 RGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG-L 850

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            PD+++Y  L++G C +G + +AF     ML  GI P+
Sbjct: 851 EPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 146/476 (30%), Positives = 252/476 (52%), Gaps = 6/476 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+ +G + ++ TYN+L+  LCK +RV  A ++   +G KG A D V+Y T+V   C+L Q
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            E   +L      + F    +  + L++GL K+ KI++A+ L+ ++   G  PN+  Y+ 
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+SLC  G+++ +  +   M +    PN  +++ L+  +   GR   A   ++RMI++G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
               V AY++LI+G C  G +  A S+  +M      P  TT+++LI G+ K   +  A 
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++N+MI NG +PNV  +T ++  LC  N   +A  L +++      P  VT+N  I+G 
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G++D A +LL+ M Q   +P+  TY  L+ GL    RV +A + + ++ K  ++LN 
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           + Y+ +LHG C+ G ++EA     +M+  G  +D +   ++I    KQ        LL  
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G   PD + YTS++      G  ++AF     M+ E   PN  T+  L+  L
Sbjct: 671 MHDQG-LRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGL 725



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 258/509 (50%), Gaps = 6/509 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D  + L   M +  +  +   +  +I+S+ R G  + A+  F R+ + G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +  TV  YN +++        S    ++  M   G+EP   T+  L+   CK+ +V  A+
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           KL  +M + G  P+  ++T ++S +C   ++ EA EL       +       YN LI G 
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C++ KI++AF LL +M  +G+ P+  TY  +IS LC  G V  +   +  +  +    N 
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +++LL GY   GR  EA      MI+ G   ++V ++ LI G            +   
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKD 670

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+++ID ++K G+   A + W+ M++  C PNVV YT ++  LC+   
Sbjct: 671 MHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGE 730

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L ++M   N PPN++T+  F+  L   G +  A+ L   M +   L N  T+N 
Sbjct: 731 MDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNI 789

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++ G  ++ R  EA ++++E+ + GI  + VTY+T+++  CR+G V  + +L   ML  G
Sbjct: 790 IIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRG 849

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            + D + +N++IY  C  G+++ A +L D
Sbjct: 850 LEPDLVAYNLLIYGCCVNGELDKAFELRD 878



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 143/466 (30%), Positives = 230/466 (49%), Gaps = 6/466 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P V T + LL  L K  +    ++L  E  N G  PD  + + +V S+C+L     A+E 
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247

Query: 158 -----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                A  F   +  YN LI+GLCK  ++ EA  +   +  +G+  +V+TY T++   C 
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +   E  + ++ +M   G +P   + + L+ G    G+  +A +L  ++ R GF+PN+  
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFV 367

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ LC  G +D+A  +   M   +  PN  TYS LID F ++G L  A   ++RMI
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI 427

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G    V AY  ++   C+      A SL  +M  +   P   TF + I G C   +V 
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A KL ++M      PN+ T+  L+ GL   N++ EA EL  E+ +  I+   VTYN ++
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G CR G + +AF+LL  M  +G   D  T+  +I   C  G+V+ A   +D +      
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQN-V 606

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             + + Y++LL G C  G + EA     +M+  GI  +     VL+
Sbjct: 607 KLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 227/437 (51%), Gaps = 6/437 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++   + L  +M  +GV  +   F S+I+ Y +    ++A K++ ++ + G+ P V  + 
Sbjct: 450 DLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFT 509

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L + N+ +  + ++  +    ++P   TYN+L++  C++ ++D A++LL +M  K
Sbjct: 510 ALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQK 569

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +Y  ++S +C  G+V +A++                Y+AL++G C+E ++ EA
Sbjct: 570 GLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEA 629

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
               CEM+ RGI+ +++ ++ +I       + +T   +L  M  +G  P+   +TS++  
Sbjct: 630 LSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDT 689

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +A + W+ M+ E   PNVV Y+ L++GLC  G MD A  +  +M+  + PPN
Sbjct: 690 YSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPN 749

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY   +D   K GN+  A  + + M+  G   N V +  +++  C+   FH+A  ++ 
Sbjct: 750 SITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLS 808

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+ VT++T I   C  G V  ++KL D M      P++  YN L+ G     
Sbjct: 809 EMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNG 868

Query: 425 RVKEAFELVTEIEKCGI 441
            + +AFEL  ++ + GI
Sbjct: 869 ELDKAFELRDDMLRRGI 885



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 188/399 (47%), Gaps = 1/399 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V   +AL+NGL K  K    + L  E V+ G+ P+  T S ++ S+C++ +   +   + 
Sbjct: 190 VRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIR 249

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M   G + +I ++  L+ G   G R  EA ++   +  +G   +VV Y TL+ G C   
Sbjct: 250 WMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQ 309

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
             +  + +  +M E    P     S L+DG  K G +  A ++  ++   G  PN+  Y 
Sbjct: 310 QFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYN 369

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC+     +A  L   M+  N  PN +T++  I   C  GR+D A+   D+M Q 
Sbjct: 370 ALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQD 429

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
                +  YN L++G  +   +  A  L  E+   G++    T+ +++ G C+   V +A
Sbjct: 430 GIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKA 489

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           F+L  KM+  G   +  TF  +I   C   K+  A +L D +    +  P  ++Y  L+ 
Sbjct: 490 FKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV-ERKIKPTEVTYNVLIE 548

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           G C  G + +AF  L+ M  +G+ P+  T+  L+  L S
Sbjct: 549 GYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCS 587



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 162/360 (45%), Gaps = 1/360 (0%)

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I+  MF     P + + ++LL G L   +     +L++  +  G  P+    S ++  +C
Sbjct: 177 IVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMC 236

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
                  A      ME N    ++ TY+ LI G  K   +  A ++   +   G + +VV
Sbjct: 237 ELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVV 296

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  +V   C+   F     L+++M      P     +  + GL   G++D A +L+ ++
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKV 356

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            ++  +PN+  YN L++ L +   + +A  L + +    ++ N +TY+ ++   CR+G +
Sbjct: 357 GRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRL 416

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A     +M+ +G       +N +I   CK G ++ A  L   +   G   P   ++TS
Sbjct: 417 DVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG-VEPTATTFTS 475

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           L+ G C    +Q+AF    KM++ GI PN  T+  L+  L S         + D+++  K
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 163/498 (32%), Positives = 261/498 (52%), Gaps = 34/498 (6%)

Query: 68  YNHILDALLAENRFS-MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           +  +L  L A+ R S  ++ +   M + G  PNVF+YNILLK LC +NR   A +LL  M
Sbjct: 129 FTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMM 188

Query: 127 GNKG--CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEA 184
            + G  C PD VSYTT+                              ING  KE  +++A
Sbjct: 189 PDDGGDCPPDVVSYTTV------------------------------INGFFKEGDLDKA 218

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           +    EM+DRGI PNV+TYS+II++LC    ++ ++ +L  M   G  PN  ++ S++ G
Sbjct: 219 YGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHG 278

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G+  EA     +M  +G  P+VV Y++L+  LC NG   EA  +   M +    P 
Sbjct: 279 YCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPE 338

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +TTY  L+ G+A  G L+    + + M+ NG  PN   ++ ++    +     QA  +  
Sbjct: 339 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFS 398

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM  +   P+TVT+ T I  LC  GRV+ AM+  +QM      P    YN L+  L   +
Sbjct: 399 KMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFD 458

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +  +A EL+ E+   GI L+ + +N+I+   C+ G V+E+ +L   M+  G K D IT++
Sbjct: 459 KWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 518

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  YC  GK++ A +LL  +   G   PD ++Y +L+ G C    M++A +  ++M +
Sbjct: 519 TLIDGYCLAGKMDEATKLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVLFREMES 577

Query: 545 EGICPNFATWNVLVRSLF 562
            G+ P+  T+N++++ LF
Sbjct: 578 SGVSPDIITYNIILQGLF 595



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 269/553 (48%), Gaps = 8/553 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LLQ M  +G  C   V  + +VIN + + G  ++A   ++ + + G+ P V  Y+ I+ A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           + ++M ++G+ PN  TYN ++   C + +   A   L +M + G  PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y +++  +CK G+  EAR++            ++ Y  L+ G   +  + E   LL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  GI PN   +S +I +    G V+ ++ +  +M  +G NP+  ++ +++      G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A   + +MI E   P  + Y++LIH LC     D+A  +  +M +     +   ++
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++ID   K G ++ + ++++ M+  G  P+++ Y+ ++   C      +A  L+  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT+NT I G C   R++ A+ L  +M+     P+I TYN +L GL +  R   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   I + G QL + TYN ILHG+C+  +  EA ++   + +   +L+  TFNI+I A
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             K G+ + A  L   +   G   PD+ +Y+ +   +   G ++E       M   G   
Sbjct: 664 LLKVGRNDEAKDLFAALSANG-LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 550 NFATWNVLVRSLF 562
           N    N +VR L 
Sbjct: 723 NSRMLNSIVRKLL 735



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/515 (28%), Positives = 256/515 (49%), Gaps = 8/515 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME--PNVFTYNILLKALCK 112
           R+ + G  P V  YN +L  L  +NR      +   M  DG +  P+V +Y  ++    K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV----SV 167
              +D AY    EM ++G  P+ V+Y++I++++CK   +++A E L     +GV      
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +  +   M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            RG  P I ++ +LL+GY   G   E   L + M+R G  PN   +S LI      G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A+ V  +M +    P+  TY  +I    K+G +  A + + +MI    SP  + Y  ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC  + + +A  LI +M       +T+ FN+ I   C  GRV  + KL D M +    
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+I TY+ L+DG     ++ EA +L+  +   G++ + VTYNT+++G C+   + +A  L
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   D IT+NII+    +  +   A +L   I   G    ++ +Y  +L G+C
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG-TQLELSTYNIILHGLC 630

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +    EA    Q +    +     T+N+++ +L 
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 232/453 (51%), Gaps = 5/453 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L++M  +GV      + S+++   + G   +A KMF  + + GLKP +  Y  +L    
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA 350

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +     ++ +   M R+G+ PN + ++IL+ A  K  +VD A  +  +M  +G  PD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +CK G+VE+A     + +  R   G  VYN+LI+ LC   K ++A  L+ EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +DRGI  + I +++II S C  G V  S  +   M   G  P+I ++++L+ GY L G+ 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L   M+  G  P+ V Y+TLI+G C    M++A+ +  +ME +   P++ TY+ +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +      A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   + 
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              T TFN  I  L   GR D A  L   +     +P++ TY+ + + L+    ++E  +
Sbjct: 651 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 710

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           L   +E+ G   N    N+I+  + + G +  A
Sbjct: 711 LFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 40/428 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G+  +  VF  +I +Y + G  +QA+ +F ++R+ GL P    Y  ++  L 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R       +  M  + + P    YN L+ +LC  ++ D A +L++EM ++G   D +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            + +I+ S CK G+V E+    +L +R G    +  Y+ LI+G C   K++EA  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G+ P+ +TY+T+I+  C +  +E +L +  +M   G +P+I ++  +L+G     RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSN---------------------------- 283
             A +L+  +   G    +  Y+ ++HGLC N                            
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 284 -------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                  G  DEA  +   +  N   P+V TYS + +   + G L     ++  M  NGC
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N      +V+ L Q     +A + +  +  ++      T + F+  L G    ++   
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRF 780

Query: 397 LLDQMKQY 404
           L ++ K +
Sbjct: 781 LPEKYKSF 788



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +PN+  Y  ++   C         + +  +  +    + + F   +KG
Sbjct: 76  YNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKG 135

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--I 441
           LC   R   AM + L +M Q  C+PN+ +YN LL GL   NR +EA EL+  +   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDC 195

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++V+Y T+++G  + G + +A+    +ML  G   + +T++ II A CK   ++ A++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +   G   P+  +Y S++ G C+SG  +EA  +L+KM ++G+ P+  T+N L+  L
Sbjct: 256 VLTSMVKNGVM-PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 562 FSN 564
             N
Sbjct: 315 CKN 317



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 40/318 (12%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G+      F S+I+S+ + G   ++ K+F  +   G+KP +  Y+ +
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D      +      + ++M   GM+P+  TYN L+   CK +R++ A  L  EM + G 
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFW 186
           +PD ++Y  I+  + +  +   A+EL +          +S YN +++GLCK +  +EA  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +   +    +     T++ +I +L  VG                                
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVG-------------------------------- 668

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              R  EA DL+  +   G +P+V  YS +   L   G ++E   +   MEEN C  N  
Sbjct: 669 ---RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 307 TYSALIDGFAKAGNLLGA 324
             ++++    + G++  A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 31/279 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL  M   G+      + ++IN Y ++   E AL +F  +   G+ P +  YN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L    R +    +Y  +   G +  + TYNI+L  LCKNN  D A ++   +   
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL--- 645

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            C  D               Q+E               +N +I  L K  + +EA  L  
Sbjct: 646 -CLTDL--------------QLE------------TRTFNIMIGALLKVGRNDEAKDLFA 678

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +   G+ P+V TYS +  +L + G +E    +   M   GC  N     S+++  L  G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               A   +  MI E       + ++L   L S G   E
Sbjct: 739 DITRAG-TYLFMIDEKHFSLEASTASLFLDLLSGGKYQE 776


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/533 (29%), Positives = 276/533 (51%), Gaps = 15/533 (2%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           SY   GL E A+ +F  +      P+V  +N ++ A++   R  ++  +Y  M+R  +  
Sbjct: 56  SYEIKGL-EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           +++++ IL+K  C  +++  A     ++   G  PD V++TT++  +C   +V EA +L 
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174

Query: 159 MRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +     V  +  L+NGLC+E ++ EA  LL  MV+ G+ P+ ITY T +  +C +G+  
Sbjct: 175 HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 218 TSLGILGQM-FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           ++L +L +M  +    PN+  +++++ G    GR  ++ +L+  M  +G  PN+V Y+ +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C +G    A  +  +M E    PNV TY+ALI+ F K G    A+++++ M+  G 
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN + Y  M+   C+ +    A  +   MA + C P+  TF T I G CG  R+D  M+
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +M +   + N  TYN L+ G   V  +  A +L  ++   G+  +IVT NT+L G+C
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 457 RAGMVVEAFQLLGKML-----------IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             G + +A ++   M              G + D +T+NI+I     +GK   A +L + 
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +   G   PD I+Y+S++ G+C    + EA      M ++   PN  T+N L+
Sbjct: 535 MPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 586



 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 164/583 (28%), Positives = 290/583 (49%), Gaps = 22/583 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F ++ + GL P V  +  +
Sbjct: 98  DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTL 157

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  ++R S    ++  + R    P+V T+  L+  LC+  RV  A  LL  M   G 
Sbjct: 158 LHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGL 213

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEEAF 185
            PD ++Y T V  +CK+G    A  L  +          V +Y+A+I+GLCK+ +  ++ 
Sbjct: 214 QPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSH 273

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM D+GI PN++TY+ +I   C  G    +  +L +M  R  +PN+ ++ +L+  +
Sbjct: 274 NLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAF 333

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA++L++ M+  G +PN + Y+++I G C    +D A  + Y M    C P+V
Sbjct: 334 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 393

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   N V Y  ++   C     + A  L ++
Sbjct: 394 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 453

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT NT + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 454 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 513

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 573

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               + +TFN +I  YCK G+V++ ++L   + G      D I Y +L++G    G +  
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEM-GRRGIVADAIIYITLIYGFRKVGNING 632

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           A    Q+M++ G+ P+  T   ++   +S       V +L+D+
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 249/493 (50%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+P    Y   +D +    +  S +N +   
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   ++PNV  Y+ ++  LCK+ R   ++ L +EM +KG  P+ V+Y  ++   C  G+
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
              A+ L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITY++
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 363

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+P++ +FT+L+ GY    R  +  +L + M R G
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + N V Y+TLIHG C  G ++ A+ +S QM  +   P++ T + L+DG    G L  A 
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V+ Y  ++  L     F +A  L E+M      P+
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++   M      PN+ T+N L++G  +  RV +  EL  
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 603

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  + + Y T+++G  + G +  A  +  +M+  G   D IT   ++  +  + 
Sbjct: 604 EMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE 663

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L+ ++
Sbjct: 664 ELERAVAMLEDLQ 676



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 212/399 (53%), Gaps = 8/399 (2%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L+  + +  + +    L  +M  + I  ++ +++ +I   C    +  +L   G++ 
Sbjct: 84  FNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLT 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G +P++ +FT+LL G  L  R  EA DL++++ R    P+V+ ++TL++GLC  G + 
Sbjct: 144 KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVV 199

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM--ISNGCSPNVVAYTC 345
           EAV++  +M EN   P+  TY   +DG  K G+ + A  +  +M  IS+   PNVV Y+ 
Sbjct: 200 EAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH-IKPNVVIYSA 258

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC++     +H+L  +M  +   PN VT+N  I G C  GR   A +LL +M + +
Sbjct: 259 IIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERK 318

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             PN+ TYN L++  ++  +  EA EL  E+   GI  N +TYN+++ G C+   +  A 
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +   M  +G   D  TF  +I  YC   ++++ ++LL  +   G    + ++Y +L+ G
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG-LVANTVTYNTLIHG 437

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            C  G +  A    Q+M++ G+CP+  T N L+  L  N
Sbjct: 438 FCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 197/405 (48%), Gaps = 16/405 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+ +G+  +   +  +I  +   G    A ++   + E  + P V  YN +++A +
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +F     +Y  M   G+ PN  TYN ++   CK +R+D A  +   M  KGC+PD  
Sbjct: 335 KEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVF 394

Query: 137 SYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++TT++   C   ++++  EL     R G  +    YN LI+G C    +  A  L  +M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-----------VRGCNPNIHSFTS 240
           +  G+ P+++T +T++  LCD G ++ +L +   M              G  P++ ++  
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC    +DEA  +   M   S
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV T++ LI+G+ KAG +    +++  M   G   + + Y  ++    +    + A 
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
            + ++M      P+T+T    + G      ++ A+ +L+ +++Y+
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQRYQ 679



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 218/474 (45%), Gaps = 52/474 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDAL 75
           LL +M   G+   +  + + ++   ++G    AL +  ++ E   +KP V IY+ I+D L
Sbjct: 204 LLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGL 263

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + R S  + ++  M+  G+ PN+ TYN ++   C + R   A +LL EM  +  +P+ 
Sbjct: 264 CKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNV 323

Query: 136 VSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           V+Y  ++++  K G+  EA EL       G+      YN++I+G CK+ +++ A  +   
Sbjct: 324 VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 383

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M  +G  P+V T++T+I   C    ++  + +L +M  RG   N  ++ +L+ G+ L G 
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN------SCP-- 302
            + A DL  +MI  G  P++V  +TL+ GLC NG + +A+ +   M+++      S P  
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 303 --------------------------------------PNVTTYSALIDGFAKAGNLLGA 324
                                                 P+  TYS++IDG  K   L  A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +Q++  M S   SPNVV +  ++   C+         L  +M       + + + T I G
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
               G ++ A+ +  +M      P+  T   +L G      ++ A  ++ ++++
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 21/319 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+   ++  +D  + +   M  +G S     F ++I+ Y      +  +++ + +   G
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      YN ++         +    +   M   G+ P++ T N LL  LC N ++  A 
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483

Query: 121 KLLVEMGNK-----------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SG 164
           ++   M              G  PD ++Y  ++  +   G+  EA EL            
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              Y+++I+GLCK+ +++EA  +   M  +   PNV+T++T+I+  C  G V+  L +  
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 603

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RG   +   + +L+ G+   G  + A D++  MI  G  P+ +    ++ G  S  
Sbjct: 604 EMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE 663

Query: 285 SMDEAVSV-----SYQMEE 298
            ++ AV++      YQ+E+
Sbjct: 664 ELERAVAMLEDLQRYQLED 682


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 175/535 (32%), Positives = 271/535 (50%), Gaps = 62/535 (11%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL------------ 76
           S  VF  V+ S  R+G   +AL + +     G  PTV  YN +LDALL            
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190

Query: 77  AENRF-----SMINP-IYS----------------------NMKRDGMEPNVFTYNILLK 108
           AE  F     + ++P +Y+                       M+++G+ PNV TYN L+ 
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFGSGV- 165
           A CK  +V  A  LL  M   G A + +SY ++++ +C  G++ E  EL   MR G G+ 
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMR-GKGLV 309

Query: 166 ---SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                YN L+NG CKE  + +   LL EMV +G+ PNV+TY+T+I+ +C  GN+  ++ I
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             QM VRG  PN  ++T+L+ G+   G  +EA  + + MI  GF P+VV Y+ L+HG C 
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G + EAV +   M E   PP+V +YS +I GF +   L  A Q+   M+  G  P+ V 
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y+ +++ LC      +A  L  +M     PP+ VT+ + I   C  G +  A++L D+M 
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH--------- 453
           Q   LP+  TY+ L++GL +  R K A  L+ ++       + VTYNT++          
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKS 609

Query: 454 ------GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
                 G C  G++ EA ++   ML    K +A  +N++I+ + + G V+ A  L
Sbjct: 610 VEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNL 664



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 244/477 (51%), Gaps = 36/477 (7%)

Query: 93  RDGMEPNVFTYNILLKALCK----NNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           R G  P V +YN +L AL +    N+R  D A ++  +M   G +P+             
Sbjct: 160 RHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPN------------- 206

Query: 148 LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
                            V  YN +I G+  +  +E+    + +M   GI PNV+TY+T+I
Sbjct: 207 -----------------VYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            + C    V+ ++ +L  M V G   N+ S+ S++ G    GR  E  +L   M  +G +
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+ V Y+TL++G C  G++ + + +  +M      PNV TY+ LI+   KAGNL  A +I
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +++M   G  PN   YT ++   CQ  + ++A+ ++ +M      P+ VT+N  + G C 
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GRV  A+ +L  M +    P++ +Y+ ++ G  R   + +AF++  E+ + G+  + VT
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVT 489

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y++++ G+C    +VEAF L  +M+  G   D +T+  +I AYC  G+++ A++L D + 
Sbjct: 490 YSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV 549

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G + PD ++Y+ L+ G+      + A   L K+  E   P+  T+N L+ +  +N
Sbjct: 550 QRG-FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNN 605



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 254/514 (49%), Gaps = 20/514 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            +++M+ EG+S +   + ++I++  +    ++A+ +   +   G+   +  YN +++ L 
Sbjct: 229 FMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLC 288

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R S +  +   M+  G+ P+  TYN L+   CK   +     LL EM  KG +P+ V
Sbjct: 289 GKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVV 348

Query: 137 SYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT+++ +CK G +  A E+   MR          Y  LI+G C++  + EA+ +L EM
Sbjct: 349 TYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEM 408

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +  G  P+V+TY+ ++   C +G V+ ++GIL  M  RG  P++ S+++++ G+      
Sbjct: 409 IVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCREREL 468

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  +   M+ +G LP+ V YS+LI GLC    + EA  +  +M     PP+  TY++L
Sbjct: 469 GKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSL 528

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ +   G L  A ++ + M+  G  P+ V Y+ ++  L +      A  L+ K+ +E  
Sbjct: 529 INAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEES 588

Query: 372 PPNTVTFNTFI---------------KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            P+ VT+NT I               KG C  G ++ A ++   M Q    PN   YN +
Sbjct: 589 VPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLM 648

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  R   V +A+ L  E+E      + V    ++  + R GM  E  +LL  +L    
Sbjct: 649 IHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCR 708

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
             DA    +++    K+G ++  + +L  +   G
Sbjct: 709 LNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDG 742



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 213/454 (46%), Gaps = 20/454 (4%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K  +  V  L+++M+ +G+   E  + +++N + + G   Q L +   +   GL P V  
Sbjct: 290 KGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVT 349

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  +++ +      S    I+  M+  G+ PN  TY  L+   C+   ++ AYK+L EM 
Sbjct: 350 YTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIE 182
             G +P  V+Y  +V   C LG+V+EA    R +  R     V  Y+ +I G C+E ++ 
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +AF +  EMV++G+ P+ +TYS++I  LC    +  +  +  +M  RG  P+  ++TSL+
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             Y + G   +A  L + M++ GFLP+ V YS LI+GL        A  +  ++      
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589

Query: 303 PNVTTYSALID---------------GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           P+  TY+ LI+               GF   G +  A +++  M+     PN   Y  M+
Sbjct: 590 PDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMI 649

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
               +    H+A++L  ++   +   +TV     +K L   G  D   +LL  + +   L
Sbjct: 650 HGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRL 709

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
            +      L++   +   +     ++TE+ K G+
Sbjct: 710 NDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGL 743


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 282/557 (50%), Gaps = 21/557 (3%)

Query: 22  KVEGVSCSEGV---FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           K  G SC  G     + + + +  +   E A+ +F  +      P+V  +  ++  ++  
Sbjct: 33  KASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRM 92

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R  ++  +Y  M+R  +  +++++NIL+K  C  +++  A     ++   G  PD V++
Sbjct: 93  ERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTF 152

Query: 139 TTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           TT++  +C   +V EA  L  +         V  +  L+NGLC+E +I EA  LL  M++
Sbjct: 153 TTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTH 252
            G+ P  ITY TI+  +C  G+  ++L +L +M  V    PN+  +++++      GR  
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M  +G  P++  Y+++I G CS+G   +A  +  +M E    P+V TY+ALI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    A ++++ M+  G  PN + Y+ M+   C+ N    A  +   MA + C 
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN +TFNT I G CG  R+D  M+LL +M +   + + TTYN L+ G   V  +  A +L
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI----------- 481
           + E+   G+  +IVT +T+L G+C  G + +A ++   M      LDA            
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I     +GK   A +L + +   G   PD I+Y+S++ G+C    + EA      
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDS 571

Query: 542 MLNEGICPNFATWNVLV 558
           M ++   PN  T+  L+
Sbjct: 572 MGSKSFSPNVVTFTTLI 588



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 280/571 (49%), Gaps = 20/571 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F +I + GL P V  +  +
Sbjct: 96  DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S    ++  M      PNV T+  L+  LC+  R+  A  LL  M   G 
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAF 185
            P  ++Y TIV  +CK G    A  L  +          V +Y+A+I+ LCK+ +  +A 
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI P++ TY+++I   C  G    +  +L +M  R  +P++ ++ +L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA +L++ M+  G +PN + YS++I G C    +D A  + Y M    C PN+
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   +   Y  ++         + A  L+++
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT +T + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLLWGICNSGGMQ 533
               + +TF  +I  YCK G+V++ ++L   + R G   N   I+Y +L+ G    G + 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA--ITYITLICGFRKVGNIN 633

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            A    Q+M++ G+ P+  T   ++  L+S 
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSK 664



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 243/493 (49%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+PT   Y  I+D +  + +  S +N +   
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   + PNV  Y+ ++ +LCK+ R   A  L  EM  KG  PD  +Y +++   C  G+
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITYS+
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+PN+ +F +L+ GY    R  +  +L + M   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + +   Y+TLIHG    G ++ A+ +  +M  +   P++ T   L+DG    G L  A 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V  Y  ++  L     F +A  L E+M      P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++ D M      PN+ T+  L++G  +  RV +  EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  N +TY T++ G  + G +  A  +  +M+  G   D IT   ++     + 
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L++++
Sbjct: 666 ELKRAVAMLEKLQ 678



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 199/418 (47%), Gaps = 16/418 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +       Q L  +M+ +G+      + S+I  +   G    A ++   + E  
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN +++A + E +F     +Y  M   G+ PN  TY+ ++   CK NR+D A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +   M  KGC+P+ +++ T++   C   ++++  EL          +  + YN LI+G 
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-------- 227
                +  A  LL EM+  G+ P+++T  T++  LCD G ++ +L +   M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 228 ---VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                G  P++ ++  L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC   
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA  +   M   S  PNV T++ LI+G+ KAG +    +++  M   G   N + Y 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            ++    +    + A  + ++M      P+T+T    + GL     +  A+ +L++++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 1/166 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G   +  +++A +L +++ +     ++V +  ++  V R         L  KM  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             + D  +FNI+I  +C   K+  A+    +I   G  +PD++++T+LL G+C    + E
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG-LHPDVVTFTTLLHGLCVEDRVSE 167

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           A     +M      PN  T+  L+  L      +  V +LD +M +
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 284/535 (53%), Gaps = 6/535 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A+ +F  + +    P++  ++ +  A+     + ++      M  +G+E N++T NI++
Sbjct: 52  EAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMI 111

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFG 162
              C+  ++  A+ ++      G  P+ ++++T+++  C  G+V EA     R + M++ 
Sbjct: 112 NCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYR 171

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V   N LINGLC + ++ EA  L+  MV  G + N ITY  +++ +C  GN   +L +
Sbjct: 172 PNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDL 231

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M  R    ++  ++ ++      G   +A  L+N M  +G   +VVAYS++I GLC+
Sbjct: 232 FRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCN 291

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           +G  D+   +  +M   +  PNV T+SALID F K G LL A +++N M++ G +P+ + 
Sbjct: 292 DGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTIT 351

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y+ ++   C+ N   +A+ +++ M  + C PN VT++  I   C   RVD  M+L  ++ 
Sbjct: 352 YSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               + +  TYN L+ G  +  ++  A EL  E+   G+  ++VTY  +L G+C  G + 
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A ++  KM      L    +NIII+  C   KV++A  L   +   G   PD+++Y  +
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKG-VKPDVLTYNVM 530

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           + G+C  G + EA +  +KM  +G  P+  T+N+L+R+     G +  V +++++
Sbjct: 531 IGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEM 585



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 259/515 (50%), Gaps = 5/515 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +   +  + E D V    ++M + G+  +      +IN + R      A  +  R  +FG
Sbjct: 75  LFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFG 134

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    ++ +++    E R S    +   M      PNV T N L+  LC   RV  A 
Sbjct: 135 FEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEAL 194

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            L+  M   GC  + ++Y  +++ +CK G    A +L  +       + V  Y+ +I+ L
Sbjct: 195 VLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSL 254

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+  +++A  L  EM  +GI  +V+ YS+II  LC+ G  +    +L +M  R   PN+
Sbjct: 255 CKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNV 314

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  EA +L+N M+  G  P+ + YS+LI G C    + EA  +   
Sbjct: 315 VTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDL 374

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PN+ TYS LI+ + KA  +    +++  + S G   + V Y  +V+  CQ+  
Sbjct: 375 MVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGK 434

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            + A  L ++M     PP+ VT+   + GLC  G +  A+++ ++M++   +  I  YN 
Sbjct: 435 LNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNI 494

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++ G+   ++V +A+ L   +   G++ +++TYN ++ G+C+ G + EA  L  KM  +G
Sbjct: 495 IIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDG 554

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
                 T+NI+I A+     V ++++L++ ++  G
Sbjct: 555 CAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 210/423 (49%), Gaps = 5/423 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN     G   +AL +  R+ ++G +     Y  +L+ +      ++   ++  M+  
Sbjct: 179 TLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEER 238

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            ++ +V  Y+I++ +LCK+  +D A  L  EM  KG   D V+Y++I+  +C  G+ ++ 
Sbjct: 239 SIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDG 298

Query: 155 ----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
               RE+  R     V  ++ALI+   KE K+ EA  L  EMV RGI P+ ITYS++I  
Sbjct: 299 AKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDG 358

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C    +  +  +L  M  +GC PNI +++ L+  Y    R      L+  +  +G + +
Sbjct: 359 FCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVAD 418

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            V Y+TL+ G C +G ++ A  +  +M     PP+V TY  L+DG    G L  A +I+ 
Sbjct: 419 TVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFE 478

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M  +     +  Y  ++  +C  +    A SL   ++ +   P+ +T+N  I GLC  G
Sbjct: 479 KMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKG 538

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A  L  +MK+  C P+  TYN L+   L  + V  + EL+ E++  G   +  T  
Sbjct: 539 SLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIK 598

Query: 450 TIL 452
            ++
Sbjct: 599 MVV 601



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 214/435 (49%), Gaps = 37/435 (8%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           VS    L NG+  + K+ EA  L   M+     P++I +S + S++      +  LG   
Sbjct: 35  VSYKERLRNGIV-DIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCK 93

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M + G   N+++   ++  +    +   A  +  R ++ GF PN + +STLI+G C  G
Sbjct: 94  EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN----- 339
            + EAV++  +M E    PNV T + LI+G    G +  A  + +RM+  GC  N     
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 340 ------------------------------VVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
                                         VV Y+ ++  LC++     A SL  +M  +
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               + V +++ I GLC  GR D   K+L +M     +PN+ T++ L+D  ++  ++ EA
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL  E+   GI  + +TY++++ G C+   + EA Q+L  M+ +G + + +T++I+I +
Sbjct: 334 KELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           YCK  +V+N ++L   I   G    D ++Y +L+ G C SG +  A    Q+M++ G+ P
Sbjct: 394 YCKAKRVDNGMRLFCEISSKG-LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452

Query: 550 NFATWNVLVRSLFSN 564
           +  T+ +L+  L  N
Sbjct: 453 SVVTYGILLDGLCDN 467



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 172/360 (47%), Gaps = 5/360 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G+      + S+I      G  +   KM   +    
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN 309

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D  + E +      +Y+ M   G+ P+  TY+ L+   CK NR+  A 
Sbjct: 310 IIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEAN 369

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           ++L  M +KGC P+ V+Y+ +++S CK  +V+    L     S         YN L+ G 
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  L  EMV RG+ P+V+TY  ++  LCD G ++ +L I  +M        I
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGI 489

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A  L+  +  +G  P+V+ Y+ +I GLC  GS+ EA  +  +
Sbjct: 490 GIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRK 549

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E+ C P+  TY+ LI        ++ + ++   M   G + +      +V +L    +
Sbjct: 550 MKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGRL 609


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 277/542 (51%), Gaps = 14/542 (2%)

Query: 30  EGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
            G  + + + +  +   E A+ +F  +      P+V  +N ++  ++   R  ++  +Y 
Sbjct: 42  RGESLKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQ 101

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            M+R  +  +V+++NIL+K  C  +++  A     ++   G  PD V+++T++  +C   
Sbjct: 102 KMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVED 161

Query: 150 QVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           +V EA +L  +     V  +  L+NGLC+E ++ EA  LL  MV+ G+ PN ITY TI+ 
Sbjct: 162 RVSEALDLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 221

Query: 209 SLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +C +G+  ++L +L +M  +    PN+  +++++ G    GR  +A +L+  M  +G  
Sbjct: 222 GMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIF 281

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P++  Y+ +I G CS+G   EA  +  +M E    PNV TYSALI+ + K      A ++
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEEL 341

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M+  G  PN + Y  M+   C+ N    A  +   MA + C P+  TFNT I G CG
Sbjct: 342 YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG 401

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R+D   +LL +M +   + + TTYN L+ G   V  +  A +L  ++   G+  +IVT
Sbjct: 402 AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI-----------TFNIIIYAYCKQGKV 496
            NT+L G+C  G + +A ++   M      LDA            T+NI+I     +GK 
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKF 521

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A +L   +   G   P+ I+Y+S++ G+C    + EA      M ++   P+  T+N 
Sbjct: 522 LEAEELYKEMPHRG-IVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 580

Query: 557 LV 558
           LV
Sbjct: 581 LV 582



 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 291/583 (49%), Gaps = 22/583 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F +I + G +P V  ++ +
Sbjct: 94  DLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTL 153

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S    ++  M R    PNV T+  L+  LC+  RV  A  LL  M   G 
Sbjct: 154 LHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGL 209

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEEAF 185
            P+ ++Y TIV  +CK+G    A  L  +          V +Y+A+I+GL K+ +  +A 
Sbjct: 210 QPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAH 269

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI P++ TY+ +I   C  G    +  +L +M  R  NPN+ ++++L+  Y
Sbjct: 270 NLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAY 329

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +   +  EA +L++ M+  G +PN + Y+++I G C    +D A  + Y M    C P+V
Sbjct: 330 VKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV 389

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +   +++ + M   G   +   Y  ++   C     + A  L ++
Sbjct: 390 FTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQ 449

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT NT + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 450 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYN 509

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  N +TY+++++G+C+   + EA Q+   M  +
Sbjct: 510 ILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSK 569

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               D +TFN ++  YCK G+V++ ++L   + G      D I+Y +L+ G    G +  
Sbjct: 570 SFSPDVVTFNTLVSGYCKAGRVDDGLELFCEM-GRRGIVADAITYITLIHGFRKVGNING 628

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           A    Q+M++ G+ P+  T   ++  L+S       V +L+D+
Sbjct: 629 ALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 244/493 (49%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA-ENRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+P    Y  I+D +    +  S +N +   
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   ++PNV  Y+ ++  L K+ R   A+ L  EM  KG  PD  +Y  ++   C  G+
Sbjct: 240 EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGR 299

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA+ L       +    V  Y+ALIN   KE K  EA  L  EM+ RGI PN ITY++
Sbjct: 300 WSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNS 359

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+P++ +F +L+ GY    R  + ++L + M   G
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + +   Y+TLIHG C  G ++ A+ +S QM  +   P++ T + L+DG    G L  A 
Sbjct: 420 LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V  Y  ++  L     F +A  L ++M      PN
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++ D M      P++ T+N L+ G  +  RV +  EL  
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFC 599

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  + +TY T++HG  + G +  A  +  +M+  G   D IT   ++     + 
Sbjct: 600 EMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKE 659

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L+ ++
Sbjct: 660 ELKRAVAMLEDLQ 672



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 207/398 (52%), Gaps = 6/398 (1%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L+  + +  + +    L  +M  + I  +V +++ +I   C    +  +L   G++ 
Sbjct: 80  FNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKIT 139

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P++ +F++LL G  +  R  EA DL+++M R    PNVV ++TL++GLC  G + 
Sbjct: 140 KLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGRVV 195

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS-NGCSPNVVAYTCM 346
           EAV++  +M E+   PN  TY  ++DG  K G+ + A  +  +M   +   PNVV Y+ +
Sbjct: 196 EAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAI 255

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  L ++     AH+L  +M  +   P+  T+N  I G C  GR   A +LL +M + + 
Sbjct: 256 IDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKI 315

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ TY+ L++  ++  +  EA EL  E+   GI  N +TYN+++ G C+   +  A  
Sbjct: 316 NPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEH 375

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +   M  +G   D  TFN +I  YC   ++++  +LL  +   G    D  +Y +L+ G 
Sbjct: 376 MFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG-LVADTTTYNTLIHGF 434

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           C  G +  A    Q+M++ G+CP+  T N L+  L  N
Sbjct: 435 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 472



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 193/402 (48%), Gaps = 16/402 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+ +G+      +  +I+ +   G   +A ++   + E  + P V  Y+ +++A +
Sbjct: 271 LYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYV 330

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +F     +Y  M   G+ PN  TYN ++   CK NR+D A  +   M  KGC+PD  
Sbjct: 331 KERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF 390

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ T++   C   ++++  EL          +  + YN LI+G C    +  A  L  +M
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-----------VRGCNPNIHSFTS 240
           +  G+ P+++T +T++  LCD G ++ +L +   M              G  P++ ++  
Sbjct: 451 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G +  G+  EA +L+  M   G +PN + YS++I+GLC    +DEA  +   M   S
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKS 570

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V T++ L+ G+ KAG +    +++  M   G   + + Y  ++    +    + A 
Sbjct: 571 FSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGAL 630

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            + ++M      P+T+T  + +  L     +  A+ +L+ ++
Sbjct: 631 DIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 47/341 (13%)

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
           G  G+   RG +  + S    +KG        +A DL++ M+R   LP+V+ ++ L+  +
Sbjct: 34  GESGEAGFRGESLKLRSGFHEIKGL------EDAIDLFSDMVRSRPLPSVIDFNKLMGVV 87

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                 D  +S+  +ME    P +V +++ LI  F     L  A   + +          
Sbjct: 88  VRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGK---------- 137

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
                                 I K+ F+   P+ VTF+T + GLC   RV  A+ L  Q
Sbjct: 138 ----------------------ITKLGFQ---PDVVTFSTLLHGLCVEDRVSEALDLFHQ 172

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M    C PN+ T+  L++GL R  RV EA  L+  + + G+Q N +TY TI+ G+C+ G 
Sbjct: 173 M----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGD 228

Query: 461 VVEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            V A  LL KM  +   K + + ++ II    K G+ ++A  L   ++  G + PD+ +Y
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIF-PDLFTY 287

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
             ++ G C+SG   EA   LQ+ML   I PN  T++ L+ +
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA 328



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 135/254 (53%), Gaps = 4/254 (1%)

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L  GF +   L  A  +++ M+ +   P+V+ +  ++ V+ +        SL +KM  + 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P +  +FN  IK  C C ++ +A+    ++ +    P++ T++ LL GL   +RV EA 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  ++     + N+VT+ T+++G+CR G VVEA  LL +M+ +G + + IT+  I+   
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK G   +A+ LL ++       P+++ Y++++ G+   G   +A     +M  +GI P+
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 551 FATWNVLVRSLFSN 564
             T+N ++    S+
Sbjct: 284 LFTYNCMIDGFCSS 297



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 19/312 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+   ++  +D  +++   M  +G S     F ++I+ Y      +   ++ + + E G
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      YN ++         +    +   M   G+ P++ T N LL  LC N ++  A 
Sbjct: 420 LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++   M       DA               VE            V  YN LI+GL  E K
Sbjct: 480 EMFKAMQKSKMDLDASR---------PFNGVE----------PDVQTYNILISGLINEGK 520

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             EA  L  EM  RGI PN ITYS++I+ LC    ++ +  +   M  +  +P++ +F +
Sbjct: 521 FLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 580

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ GY   GR  +  +L+  M R G + + + Y TLIHG    G+++ A+ +  +M  + 
Sbjct: 581 LVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSG 640

Query: 301 CPPNVTTYSALI 312
             P+  T  +++
Sbjct: 641 VYPDTITIRSML 652


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  281 bits (720), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 303/572 (52%), Gaps = 9/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           MIEKLG   E + ++ +L + ++       EGV+I  + +Y R G  ++A+ +F R+  F
Sbjct: 46  MIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFF 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +P+V+ YN I++ L+    F   + +Y  M+  G+ P+V+T+ I +K+ C+ +R   A
Sbjct: 106 NCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALING 174
            +LL  M ++GC   AV+Y T++    +     EA E     L +     +  +N LI+ 
Sbjct: 166 RRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHT 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC++  ++E+  LL +++ RG+ PN+ T +  I   C    +  ++ +L  +  RG  P+
Sbjct: 226 LCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPD 284

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +L+ G     +  EA     +M+ EG+ P+   Y+++I G C  G M  A  +  
Sbjct: 285 VITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILR 344

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
                   P+ +TY +LI+G  + G++  A  ++N  +  G  PN+V    +VK L Q  
Sbjct: 345 DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQG 404

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  QA  L+ +M+   C P+  T+N  I GLC  G V  A  L+        LP++ T+N
Sbjct: 405 LILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFN 464

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +  ++  A E+V  +   G+  +++TYN+IL+G+C+AG   +       M+ +
Sbjct: 465 TLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK 524

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + IT+NI+  ++CK  KV  A+ L++ ++  G   PD++++ +L+ G C++G +  
Sbjct: 525 GCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG-LTPDVVNFGTLMKGFCDNGDLDG 583

Query: 535 AFIYLQKMLNE-GICPNFATWNVLVRSLFSNL 565
           A+   +++  +       AT+N+++ +    L
Sbjct: 584 AYQLFKRVDEQYKFSHTIATYNIMINAFAGKL 615



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 250/493 (50%), Gaps = 7/493 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M   G+      F  +I++  R G  +++ ++  ++ + G+ P +   N  +    
Sbjct: 203 LFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                +    +   + R G+ P+V TYN L+  LCKN +V  A   L +M N+G  PD  
Sbjct: 263 QRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGF 321

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +I+   CKLG ++ A    R+ A + F    S Y +LINGLC++  I+ A  +  E 
Sbjct: 322 TYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEA 381

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++G+ PN++  +T++  L   G +  +L ++ +M   GC+P+I ++  ++ G    G  
Sbjct: 382 MEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCV 441

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L    I +G LP+V  ++TLI G C    +D A+ +  +M  +   P+V TY+++
Sbjct: 442 SDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSI 501

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ++G  KAG        +  M+  GC PN++ Y  + +  C+     +A +LIE+M  +  
Sbjct: 502 LNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGL 561

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P+ V F T +KG C  G +D A +L  ++ +QY+    I TYN +++       +  A 
Sbjct: 562 TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAE 621

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  ++ + G   +  TY  ++ G C+ G +   +  L   + +G      TF  ++   
Sbjct: 622 KLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681

Query: 491 CKQGKVNNAIQLL 503
           C + +V+ A+ ++
Sbjct: 682 CLKRRVHEAVGII 694



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 199/402 (49%), Gaps = 6/402 (1%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           ++ L++M  EG       + S+I+ Y ++G+ + A ++       G  P    Y  +++ 
Sbjct: 305 EHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLING 364

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L  +        +++     G++PN+   N L+K L +   +  A KL+ EM   GC+PD
Sbjct: 365 LCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
             +Y  +++ +CK+G V +A  L     A      V  +N LI+G CK+ K++ A  ++ 
Sbjct: 425 IWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVD 484

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M + G+ P+VITY++I++ LC  G  E  +G    M  +GC PNI ++  L + +    
Sbjct: 485 RMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKAR 544

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTY 308
           +  EA +L   M  +G  P+VV + TL+ G C NG +D A  +  +++E       + TY
Sbjct: 545 KVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATY 604

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + +I+ FA   N+  A +++N+M  NG SP+   Y  M+   C+    +  +S +     
Sbjct: 605 NIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIE 664

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           +   P+  TF   +  LC   RV  A+ ++  M     +P +
Sbjct: 665 KGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 161/310 (51%), Gaps = 8/310 (2%)

Query: 253 EASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNG---SMDEAVSVSYQMEENSCPPNVTTY 308
           +A +++N + +E GF   ++ Y  +I  L  +G   +M+E ++ +    +N     V  Y
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGV--Y 79

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
              +  + + G +  A  ++ RM    C P+V +Y  ++ +L +   F QAH +  +M  
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+  TF   +K  C   R   A +LL+ M    C  +   Y  ++ G    N   E
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A EL  E+   GI  +I+ +N ++H +CR G V E+ +LL K+L  G   +  T NI I 
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            +C++  +N AI+LLD +  G    PD+I+Y +L+ G+C +  + EA  YL+KM+NEG  
Sbjct: 260 GFCQRAMLNEAIRLLDGV--GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE 317

Query: 549 PNFATWNVLV 558
           P+  T+N ++
Sbjct: 318 PDGFTYNSII 327



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/446 (23%), Positives = 216/446 (48%), Gaps = 8/446 (1%)

Query: 136 VSYTTIVSSICKLGQVEEAREL----AMRFGSGV--SVYNALINGLCKEHKIEEAFWLLC 189
           ++Y  ++  +   G+ E   E+     M   +G+   VY   +    ++ KI+EA  +  
Sbjct: 41  LTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFE 100

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M     +P+V +Y+ I++ L +    + +  +  +M  +G  P++++FT  +K +    
Sbjct: 101 RMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTS 160

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R H A  L N M  +G   + VAY T+I G        EA  +  +M      P++  ++
Sbjct: 161 RPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFN 220

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI    + G++  + ++ N+++  G SPN+      ++  CQ  M ++A  L++ +   
Sbjct: 221 KLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-R 279

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ +T+NT I GLC   +V  A   L +M      P+  TYN ++DG  ++  ++ A
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            +++ +    G   +  TY ++++G+C+ G +  A  +  + + +G K + +  N ++  
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +QG +  A++L++ +   G  +PDI +Y  ++ G+C  G + +A   +   + +G  P
Sbjct: 400 LSQQGLILQALKLMNEMSENG-CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLP 458

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILD 575
           +  T+N L+      L     + I+D
Sbjct: 459 DVFTFNTLIDGYCKKLKLDNAIEIVD 484



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 121/246 (49%), Gaps = 6/246 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F ++I+ Y +    + A+++  R+   G+ P V  YN IL+ L    ++  +   +  M
Sbjct: 462 TFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLM 521

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G  PN+ TYNIL ++ CK  +V+ A  L+ EM NKG  PD V++ T++   C  G +
Sbjct: 522 MEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDL 581

Query: 152 EEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           + A +L  R      F   ++ YN +IN    +  +  A  L  +M + G  P+  TY  
Sbjct: 582 DGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRV 641

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C  GN+ +    L     +G  P++ +F  +L    L  R HEA  + + M+ +G
Sbjct: 642 MIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKG 701

Query: 266 FLPNVV 271
            +P VV
Sbjct: 702 IVPEVV 707


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 282/557 (50%), Gaps = 21/557 (3%)

Query: 22  KVEGVSCSEGV---FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           K  G SC  G     + + + +  +   E A+ +F  +      P+V  +  ++  ++  
Sbjct: 33  KASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRM 92

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R  ++  +Y  M+R  +  +++++NIL+K  C  +++  A     ++   G  PD V++
Sbjct: 93  ERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTF 152

Query: 139 TTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           TT++  +C   +V EA +   +         V  +  L+NGLC+E +I EA  LL  M++
Sbjct: 153 TTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTH 252
            G+ P  ITY TI+  +C  G+  ++L +L +M  V    PN+  +++++      GR  
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M  +G  P++  Y+++I G CS+G   +A  +  +M E    P+V TY+ALI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    A ++++ M+  G  PN + Y+ M+   C+ N    A  +   MA + C 
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN +TFNT I G CG  R+D  M+LL +M +   + + TTYN L+ G   V  +  A +L
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI----------- 481
           + E+   G+  +IVT +T+L G+C  G + +A ++   M      LDA            
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I     +GK   A +L + +   G   PD I+Y+S++ G+C    + EA      
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDS 571

Query: 542 MLNEGICPNFATWNVLV 558
           M ++   PN  T+  L+
Sbjct: 572 MGSKSFSPNVVTFTTLI 588



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 279/571 (48%), Gaps = 20/571 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F +I + GL P V  +  +
Sbjct: 96  DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S     +  M      PNV T+  L+  LC+  R+  A  LL  M   G 
Sbjct: 156 LHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAF 185
            P  ++Y TIV  +CK G    A  L  +          V +Y+A+I+ LCK+ +  +A 
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI P++ TY+++I   C  G    +  +L +M  R  +P++ ++ +L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA +L++ M+  G +PN + YS++I G C    +D A  + Y M    C PN+
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   +   Y  ++         + A  L+++
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT +T + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLLWGICNSGGMQ 533
               + +TF  +I  YCK G+V++ ++L   + R G   N   I+Y +L+ G    G + 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA--ITYITLICGFRKVGNIN 633

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            A    Q+M++ G+ P+  T   ++  L+S 
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSK 664



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 243/493 (49%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+PT   Y  I+D +  + +  S +N +   
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   + PNV  Y+ ++ +LCK+ R   A  L  EM  KG  PD  +Y +++   C  G+
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITYS+
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+PN+ +F +L+ GY    R  +  +L + M   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + +   Y+TLIHG    G ++ A+ +  +M  +   P++ T   L+DG    G L  A 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V  Y  ++  L     F +A  L E+M      P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++ D M      PN+ T+  L++G  +  RV +  EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  N +TY T++ G  + G +  A  +  +M+  G   D IT   ++     + 
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L++++
Sbjct: 666 ELKRAVAMLEKLQ 678



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 199/418 (47%), Gaps = 16/418 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +       Q L  +M+ +G+      + S+I  +   G    A ++   + E  
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN +++A + E +F     +Y  M   G+ PN  TY+ ++   CK NR+D A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +   M  KGC+P+ +++ T++   C   ++++  EL          +  + YN LI+G 
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-------- 227
                +  A  LL EM+  G+ P+++T  T++  LCD G ++ +L +   M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 228 ---VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                G  P++ ++  L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC   
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA  +   M   S  PNV T++ LI+G+ KAG +    +++  M   G   N + Y 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            ++    +    + A  + ++M      P+T+T    + GL     +  A+ +L++++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 1/166 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G   +  +++A +L +++ +     ++V +  ++  V R         L  KM  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             + D  +FNI+I  +C   K+  A+    +I   G  +PD++++T+LL G+C    + E
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG-LHPDVVTFTTLLHGLCVEDRVSE 167

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           A  +  +M      PN  T+  L+  L      +  V +LD +M +
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 282/549 (51%), Gaps = 14/549 (2%)

Query: 25  GVSCSEGVFISVINSYRRVGL--------AEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           G  C E  F S    YR +           + A+ +F  + +    P++  +N +L A+ 
Sbjct: 35  GSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA 94

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N+F ++  +   M+  G+  +++TY+I +   C+ +++  A  +L +M   G  PD V
Sbjct: 95  KMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV 154

Query: 137 SYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + +++++  C   ++ +A  L      M +      +  LI+GL   +K  EA  L+ +M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V RG  P+++TY T+++ LC  G+++ +L +L +M       ++  + +++ G       
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L+  M  +G  P+V  YS+LI  LC+ G   +A  +   M E    PNV T+SAL
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ID F K G L+ A ++++ MI     P++  Y+ ++   C ++   +A  + E M  ++C
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT++T IKG C   RV+  M+L  +M Q   + N  TY  L+ G  +      A  
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++   G+  NI+TYN +L G+C+ G + +A  +   +     + D  T+NI+I   C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K GKV +  +L   +   G  +P++I+Y +++ G C  G  +EA   L+KM  +G  PN 
Sbjct: 515 KAGKVEDGWELFCNLSLKG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNS 573

Query: 552 ATWNVLVRS 560
            T+N L+R+
Sbjct: 574 GTYNTLIRA 582



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 272/524 (51%), Gaps = 7/524 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +QM+  G+S     +   IN + R      AL +  ++ + G +P +   + +L+     
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R S    +   M   G +P+ FT+  L+  L  +N+   A  L+ +M  +GC PD V+Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 139 TTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T+V+ +CK G ++ A  L  +   G     V +YN +I+GLCK   +++A  L  EM +
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +GI P+V TYS++IS LC+ G    +  +L  M  R  NPN+ +F++L+  ++  G+  E
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L++ MI+    P++  YS+LI+G C +  +DEA  +   M    C PNV TYS LI 
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF KA  +    +++  M   G   N V YT ++    Q      A  + ++M      P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N +T+N  + GLC  G++  AM + + +++    P+I TYN +++G+ +  +V++ +EL 
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +   G+  N++ YNT++ G CR G   EA  LL KM  +G   ++ T+N +I A  + 
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           G    + +L+  +R  G       S   L+  + + G + ++F+
Sbjct: 587 GDREASAELIKEMRSCGFAGD--ASTIGLVTNMLHDGRLDKSFL 628



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 211/430 (49%), Gaps = 5/430 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  ++ + G +P +  Y  +++ L 
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +E +V  YN ++  LCK   +D A  L  EM NKG  PD  
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++++L+KG+    R 
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLIHG       D A  V  QM      PN+ TY+ L
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN + +NT I G C  G  + A  LL +MK+   LPN  TYN L+   LR    + + E
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594

Query: 432 LVTEIEKCGI 441
           L+ E+  CG 
Sbjct: 595 LIKEMRSCGF 604



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 261/526 (49%), Gaps = 20/526 (3%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           R + L  + L + + ++  G  PTV  + ++  +   E  F+  +  Y  + R+ +   +
Sbjct: 3   RSISLTAKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREILRNRLSDII 62

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
                         +VD A  L  +M      P  V +  ++S++ K+ + E    L  +
Sbjct: 63  --------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQ 108

Query: 161 FGS-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
             + G+S     Y+  IN  C+  ++  A  +L +M+  G +P+++T S++++  C    
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  ++ ++ QM   G  P+  +FT+L+ G  L  +  EA  L ++M++ G  P++V Y T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++GLC  G +D A+S+  +ME+     +V  Y+ +IDG  K  ++  A  ++  M + G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+V  Y+ ++  LC    +  A  L+  M      PN VTF+  I      G++  A 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           KL D+M +    P+I TY+ L++G    +R+ EA  +   +       N+VTY+T++ G 
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+A  V E  +L  +M   G   + +T+  +I+ + +    +NA  +  ++   G  +P+
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG-VHPN 467

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I++Y  LL G+C +G + +A +  + +    + P+  T+N+++  +
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 206/397 (51%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K +K E    L  +M   GI  ++ TYS  I+  C    +  +L +L +M 
Sbjct: 86  FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY    R  +A  L ++M+  G+ P+   ++TLIHGL  +    
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  QM +  C P++ TY  +++G  K G++  A  +  +M       +VV Y  ++
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L  +M  +   P+  T+++ I  LC  GR   A +LL  M + +  
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I TY+++++G C    + EA  +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    + +T++ +I  +CK  +V   ++L   +   G    + ++YT+L+ G  
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYTTLIHGFF 444

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +     A +  ++M++ G+ PN  T+N+L+  L  N
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 203/403 (50%), Gaps = 2/403 (0%)

Query: 161 FGSGVSVYNALI-NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           F S    Y  ++ N L    K+++A  L  +MV     P+++ ++ ++S++  +   E  
Sbjct: 43  FASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELV 102

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +  QM   G + ++++++  +  +    +   A  +  +M++ G+ P++V  S+L++G
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNG 162

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C +  + +AV++  QM E    P+  T++ LI G         A  + ++M+  GC P+
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           +V Y  +V  LC+      A SL++KM       + V +NT I GLC    +D A+ L  
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFT 282

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M      P++ TY+ L+  L    R  +A  L++++ +  I  N+VT++ ++    + G
Sbjct: 283 EMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +VEA +L  +M+      D  T++ +I  +C   +++ A  + + +    +  P++++Y
Sbjct: 343 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTY 401

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++L+ G C +  ++E     ++M   G+  N  T+  L+   F
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 177/340 (52%), Gaps = 5/340 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M  +G+      + S+I+     G    A ++   + E  
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++DA + E +      +Y  M +  ++P++FTY+ L+   C ++R+D A 
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
            +   M +K C P+ V+Y+T++   CK  +VEE     RE++ R   G +V Y  LI+G 
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +    + A  +  +MV  G+ PN++TY+ ++  LC  G +  ++ +   +      P+I
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  +++G    G+  +  +L+  +  +G  PNV+AY+T+I G C  GS +EA S+  +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           M+E+   PN  TY+ LI    + G+   ++++   M S G
Sbjct: 564 MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 181/371 (48%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ +ID    LL++M+   +     ++ ++I+   +    + AL +F  +   G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L    R+S  + + S+M    + PNV T++ L+ A  K  ++  A 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  EM  +   PD  +Y+++++  C   +++EA+ +     S      V  Y+ LI G 
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++EE   L  EM  RG+  N +TY+T+I       + + +  +  QM   G +PNI
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  LL G    G+  +A  ++  + R    P++  Y+ +I G+C  G +++   +   
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      PNV  Y+ +I GF + G+   A  +  +M  +G  PN   Y  +++   ++  
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588

Query: 356 FHQAHSLIEKM 366
              +  LI++M
Sbjct: 589 REASAELIKEM 599



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 6/209 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M   G+  +   + ++I+ + +    + A  +F ++   G+ P +  YN +LD L 
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    ++  ++R  MEP+++TYNI+++ +CK  +V+  ++L   +  KG +P+ +
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++S  C+ G  EEA  L  +            YN LI    ++   E +  L+ EM
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSL 220
              G   +  T   + + L D G ++ S 
Sbjct: 600 RSCGFAGDASTIGLVTNMLHD-GRLDKSF 627


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 168/526 (31%), Positives = 266/526 (50%), Gaps = 13/526 (2%)

Query: 49  ALKMFYRIREFG---LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+  + R+   G   + PTV  Y  ++       R  +      N+ + G   +  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 106 LLKALCKNNRVDGAYKL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMR 160
           LLK LC + R   A  + L  M   GC PD  SY  ++  +C   + +EA EL    A  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 161 FGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            G G    V  YN ++NG  KE   ++A+    EM+DRGI P+V+TYS+II++LC    +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++ +L  M   G  P+  ++ S+L GY   G+  EA     +M  +G  PNVV YS+L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++ LC NG   EA  +   M +    P++ TY  L+ G+A  G L+    + + M+ NG 
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+   +  ++    +     QA  +  KM      PN V + T I  LC  G VD AM 
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
             +QM      PNI  Y  L+ GL   ++  +A EL+ E+   GI LN + +N+I+   C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G V+E+ +L   M+  G K D IT+N +I   C  GK++ A +LL  +   G   PDI
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG-VKPDI 551

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++Y +L+ G C    M +A    ++M++ G+ PN  T+N++++ LF
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 263/516 (50%), Gaps = 9/516 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD---GMEPNVFTYNILLKALC 111
           R+ E G  P V  YN++L  L  ENR      +   M  D   G  P+V +YN +L    
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV----S 166
           K    D AY    EM ++G  PD V+Y++I++++CK   +++A E L     +GV     
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN++++G C   + +EA   L +M   G++PNV+TYS++++ LC  G    +  I   M
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG  P+I ++ +LL+GY   G   E   L + M+R G  P+   ++ LI        +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+ V  +M ++   PNV  Y  +ID   K+G++  A   + +MI  G +PN++ YT +
Sbjct: 393 DQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 452

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC  + + +A  LI +M       NT+ FN+ I   C  GRV  + KL D M +   
Sbjct: 453 IHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGV 512

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I TYN L+DG     ++ EA +L+  +   G++ +IVTY T+++G CR   + +A  
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M+  G   + IT+NII+       +   A +L   I   G    ++ +Y  +L G+
Sbjct: 573 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG-TQLELSTYNIILHGL 631

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           C +    EA    Q +    +     T+N+++ +L 
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 260/533 (48%), Gaps = 6/533 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +V+N + + G +++A   ++ + + G+ P V  Y+ I+ AL           + + M ++
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P+  TYN +L   C + +   A   L +M + G  P+ V+Y+++++ +CK G+  EA
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           R++            ++ Y  L+ G   +  + E   LL  MV  GI P+   ++ +I +
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICA 385

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                 V+ ++ +  +M   G NPN+  + +++      G   +A   + +MI EG  PN
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 445

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ Y++LIHGLC+    D+A  +  +M +     N   ++++ID   K G ++ + ++++
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+  G  P+++ Y  ++   C      +A  L+  M      P+ VT+ T I G C   
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A+ L  +M      PNI TYN +L GL    R   A EL   I K G QL + TYN
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ILHG+C+  +  EA ++   + +   +L+  TFNI+I A  K G+++ A  L       
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G   PD+ +Y+ +   +   G ++E       M   G   +    N +VR L 
Sbjct: 686 G-LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 219/423 (51%), Gaps = 16/423 (3%)

Query: 152 EEAREL---AMRFGSGVSVY---NALINGLCKEHKIEEAFWLLCEMVDRG---IDPNVIT 202
           E+AR +    +R G G S+Y    AL +     H    A      M   G   + P V T
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALAD--VARHSPAAAVSRYNRMARAGAGKVTPTVHT 94

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y+ +I   C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS---CPPNVTTYSALIDGFAKA 318
              G +P+V +Y+ L+ GLC      EA+ + + M ++     PP+V +Y+ +++GF K 
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+   A   ++ M+  G  P+VV Y+ ++  LC+     +A  ++  M      P+ +T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N+ + G C  G+   A+  L +M+     PN+ TY+ L++ L +  R  EA ++   + K
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G++ +I TY T+L G    G +VE   LL  M+  G + D   FNI+I AY KQ KV+ 
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ +  ++R  G  NP+++ Y +++  +C SG + +A +Y ++M++EG+ PN   +  L+
Sbjct: 395 AMLVFSKMRQHG-LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 559 RSL 561
             L
Sbjct: 454 HGL 456



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 229/452 (50%), Gaps = 5/452 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L++M+ +GV  +   + S++N   + G + +A K+F  + + GL+P +  Y  +L     
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +     ++ +   M R+G++P+   +NIL+ A  K  +VD A  +  +M   G  P+ V 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 138 YTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y T++  +CK G V++A     + +       + VY +LI+GLC   K ++A  L+ EM+
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           DRGI  N I +++II S C  G V  S  +   M   G  P+I ++ +L+ G  L G+  
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA+ L   M+  G  P++V Y TLI+G C    MD+A+++  +M  +   PN+ TY+ ++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G         A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   +  
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
             T TFN  I  L  CGR+D A  L         +P++ TY+ + + L+    ++E  +L
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              +E+ G   +    N+I+  + + G +  A
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 243/526 (46%), Gaps = 6/526 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
            +M   G+      + S+I +  +    ++A+++   + + G+ P    YN IL    + 
Sbjct: 225 HEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +          M+ DG+EPNV TY+ L+  LCKN R   A K+   M  +G  PD  +Y
Sbjct: 285 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 344

Query: 139 TTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T++      G + E     +L +R G      V+N LI    K+ K+++A  +  +M  
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
            G++PNV+ Y T+I  LC  G+V+ ++    QM   G  PNI  +TSL+ G     +  +
Sbjct: 405 HGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDK 464

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A +L   M+  G   N + ++++I   C  G + E+  +   M      P++ TY+ LID
Sbjct: 465 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 524

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G   AG +  A+++   M+S G  P++V Y  ++   C+ +    A +L ++M      P
Sbjct: 525 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 584

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N +T+N  ++GL    R   A +L   + +      ++TYN +L GL + N   EA  + 
Sbjct: 585 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 644

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +    +QL   T+N ++  + + G + EA  L       G   D  T++++     +Q
Sbjct: 645 QNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQ 704

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           G +     L   +   G  + D     S++  +   G +  A  YL
Sbjct: 705 GSLEELDDLFLSMEENG-CSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 233/504 (46%), Gaps = 5/504 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L  M   GV      + S+++ Y   G  ++A+    ++R  G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ +++ L    R +    I+ +M + G+EP++ TY  LL+       +   +
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            LL  M   G  PD   +  ++ +  K  +V++A  +   MR       V  Y  +I+ L
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++A     +M+D G+ PN+I Y+++I  LC     + +  ++ +M  RG   N 
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S++  +   GR  E+  L++ M+R G  P+++ Y+TLI G C  G MDEA  +   
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P++ TY  LI+G+ +   +  A  ++  M+S+G SPN++ Y  +++ L     
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   +          T+N  + GLC     D A+++   +   +      T+N 
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++  LL+  R+ EA +L       G+  ++ TY+ +   +   G + E   L   M   G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721

Query: 476 TKLDAITFNIIIYAYCKQGKVNNA 499
              D+   N I+    ++G +  A
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRA 745


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 163/541 (30%), Positives = 291/541 (53%), Gaps = 15/541 (2%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIR---EFGLKPTVKIYNHILDALLAENRFSMIN 85
           ++ V I +I S R  G  ++ +++   I    +FG   T+  ++ +L  L   +   +  
Sbjct: 130 ADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGY--TLYSFSTLLIQLGKFDMDGLGR 187

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +Y  M   G+ PN+FT+N ++K LC   +V  A  ++  + + G  PD  +YT+++   
Sbjct: 188 DVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247

Query: 146 CKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CK G ++ A E+  R            Y+ALINGLC E ++EEA  +L EM+D+GI+P V
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             Y+  I SLCD G    ++ +LG+M  RGC PN+ ++T+L+ G    G+   A  ++++
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+ +G +P  V YS LI+ L   G  + A+++   M  +   PN  TY+ +I GF   G 
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A+ I+++M+  G SPNV+ Y  ++ +  +    + A  L+E M       +T T+  
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G    G+++ A  L ++M ++   PN+ TYN +++G L V +V +A  L  ++ + G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              +  TYN ++ G  +   + EA    GKM+ +G   + IT+   I   CK G+ + A 
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++   ++   ++ P++ +Y+SL+ G+C  G  ++A    +++L++G  PN  T+  LVR 
Sbjct: 608 KIFHEMK-KRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRG 662

Query: 561 L 561
           L
Sbjct: 663 L 663



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 158/567 (27%), Positives = 274/567 (48%), Gaps = 10/567 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L  K ++   + ++  +   G       + S+I  + + G  + A +MF R+ + G
Sbjct: 208 MIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDG 267

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y+ +++ L +E R      +   M   G+EP V  Y I + +LC   R   A 
Sbjct: 268 CDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAV 327

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           KLL +M  +GC P+  +YT ++S + + G+ E A     + LA         Y+ALIN L
Sbjct: 328 KLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQL 387

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             E + E A  +   M+     PN  TY+ II   C +G ++ +  I  QM   G +PN+
Sbjct: 388 YVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNV 447

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++  Y   G  + A  L   M   G   +   Y+ LI G    G ++ A S+  +
Sbjct: 448 ITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNE 507

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E+   PNV TY+A+I+G+     +  A  ++ +M+ +G  P+   Y  M+    + N 
Sbjct: 508 MVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNR 567

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +   KM  +   PN +T+ +FI GLC  GR   A K+  +MK+ +  PN+ TY+ 
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSS 627

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+DGL +  + ++A  L+ +    G + N+ TY T++ G+C  G   EA QL+  M  +G
Sbjct: 628 LIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            +     +  ++   CK  +V +A+++ D +   G + P +  Y +L+  +C +   Q+A
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTG-FQPCLSDYKALICALCKANFRQKA 742

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLF 562
               Q ML +    +   W VL+  L 
Sbjct: 743 QCMFQTMLKKHWNSDEVVWTVLLDGLL 769



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 216/498 (43%), Gaps = 39/498 (7%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           G  CE      LL +MK  G   +   + ++I+   R G  E A+ +++++   GL PT 
Sbjct: 321 GRSCE---AVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTA 377

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y+ +++ L  E RF     I+  M      PN  TYN+++K  C    +  A  +  +
Sbjct: 378 VTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQ 437

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVSV----YNALINGLCKEHK 180
           M   G +P+ ++Y  I+    K G +  A R L M  G+G+ +    Y  LI+G  +  K
Sbjct: 438 MLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGK 497

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E AF L  EMV+ GI PNV+TY+ II+    V  V+ +L +  +M   G  P+  ++  
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNM 557

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME--- 297
           ++ G+    R  EA +   +M+++G LPNV+ Y++ I GLC NG    A  + ++M+   
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617

Query: 298 ----------------------------ENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
                                       ++ C PNV TY+ L+ G    G    A Q+  
Sbjct: 618 YFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVE 677

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M   G  P+   Y  ++   C+N     A  + + M      P    +   I  LC   
Sbjct: 678 SMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKAN 737

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
               A  +   M +     +   +  LLDGLL+      + EL+  +E     LN  T  
Sbjct: 738 FRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRV 797

Query: 450 TILHGVCRAGMVVEAFQL 467
            +   +   G  +E  Q+
Sbjct: 798 MLARELSALGCSIEIPQI 815



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 1/271 (0%)

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           V  +M  +   PN+ T++A+I      G +  A  I   +   G  P+   YT ++   C
Sbjct: 189 VYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHC 248

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +N     A  + ++M  + C PN+VT++  I GLC  GR++ AM +L++M      P + 
Sbjct: 249 KNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVH 308

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            Y   +  L    R  EA +L+ +++K G   N+ TY  ++ G+ R G    A  +  KM
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKM 368

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           L +G    A+T++ +I     +G+   A+ + + +       P+  +Y  ++ G C+ G 
Sbjct: 369 LADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSL-PNTETYNVIIKGFCSIGY 427

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +Q+A     +ML  G  PN  T+N+++   F
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYF 458



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 130/316 (41%), Gaps = 36/316 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G+S +   + ++IN Y  V   + AL +F+++ E G  P+   YN ++    
Sbjct: 504 LFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFS 563

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK------- 129
             NR S        M + G+ PNV TY   +  LCKN R   A+K+  EM  +       
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLC 623

Query: 130 ------------------------GCAPDAVSYTTIVSSICKLGQVEEAREL--AMR--- 160
                                   GC P+  +YTT+V  +C  G+  EA +L  +M+   
Sbjct: 624 TYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKG 683

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
                 +Y AL+ G CK  ++E A  +   MV  G  P +  Y  +I +LC     + + 
Sbjct: 684 LQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +   M  +  N +   +T LL G L  G T  + +L + M       N      L   L
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLAREL 803

Query: 281 CSNGSMDEAVSVSYQM 296
            + G   E   +S Q+
Sbjct: 804 SALGCSIEIPQISKQL 819



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 2/140 (1%)

Query: 425 RVKEAFELVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            VK   ++++EI         + +++T+L  + +  M      +  +ML  G + +  TF
Sbjct: 146 EVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTF 205

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N +I   C +GKV  A  ++  I   G   PD  +YTSL+ G C +G +  AF    +M+
Sbjct: 206 NAMIKILCNKGKVQEAELIMGHIFHYGAC-PDTFTYTSLIIGHCKNGNLDLAFEMFDRMV 264

Query: 544 NEGICPNFATWNVLVRSLFS 563
            +G  PN  T++ L+  L S
Sbjct: 265 KDGCDPNSVTYSALINGLCS 284



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 65/146 (44%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++ MK +G+  SE ++ +++    +    E ALK+F  +   G +P +  Y  ++ AL 
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALC 734

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N       ++  M +     +   + +LL  L K    D + +LL  M ++ C  +  
Sbjct: 735 KANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQ 794

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG 162
           +   +   +  LG   E  +++ + G
Sbjct: 795 TRVMLARELSALGCSIEIPQISKQLG 820


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/526 (31%), Positives = 266/526 (50%), Gaps = 13/526 (2%)

Query: 49  ALKMFYRIREFG---LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+  + R+   G   + PTV  Y  ++       R  +      N+ + G   +  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 106 LLKALCKNNRVDGAYKL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMR 160
           LLK LC + R   A  + L  M   GC PD  SY  ++  +C   + +EA EL    A  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 161 FGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            G G    V  YN ++NG  KE   ++A+    EM+DRGI P+V+TYS+II++LC    +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++ +L  M   G  P+  ++ S+L GY   G+  EA     +M  +G  PNVV YS+L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++ LC NG   EA  +   M +    P++ TY  L+ G+A  G L+    + + M+ NG 
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+   +  ++    +     QA  +  KM      PN V + T I  LC  G VD AM 
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
             +QM      PNI  Y  L+ GL   ++  +A EL+ E+   GI LN + +N+I+   C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G V+E+ +L   M+  G K D IT+N +I   C  GK++ A +LL  +   G   PDI
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG-VKPDI 551

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++Y +L+ G C    M +A    ++M++ G+ PN  T+N++++ LF
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 158/519 (30%), Positives = 264/519 (50%), Gaps = 9/519 (1%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD---GMEPNVFTYNILLK 108
           +  R+ E G  P V  YN++L  L  ENR      +   M  D   G  P+V +YN +L 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV-- 165
              K    D AY    EM ++G  PD V+Y++I++++CK   +++A E L     +GV  
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269

Query: 166 --SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               YN++++G C   + +EA   L +M   G++PNV+TYS++++ LC  G    +  I 
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  RG  P+I ++ +LL+GY   G   E   L + M+R G  P+   ++ LI      
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQ 389

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +D+A+ V  +M ++   PNV  Y  +ID   K+G++  A   + +MI  G +PN++ Y
Sbjct: 390 EKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVY 449

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T ++  LC  + + +A  LI +M       NT+ FN+ I   C  GRV  + KL D M +
Sbjct: 450 TSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR 509

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+I TYN L+DG     ++ EA +L+  +   G++ +IVTY T+++G CR   + +
Sbjct: 510 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 569

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A  L  +M+  G   + IT+NII+       +   A +L   I   G    ++ +Y  +L
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT-QLELSTYNIIL 628

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            G+C +    EA    Q +    +     T+N+++ +L 
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 667



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 260/533 (48%), Gaps = 6/533 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +V+N + + G +++A   ++ + + G+ P V  Y+ I+ AL           + + M ++
Sbjct: 206 TVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN 265

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P+  TYN +L   C + +   A   L +M + G  P+ V+Y+++++ +CK G+  EA
Sbjct: 266 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 325

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           R++            ++ Y  L+ G   +  + E   LL  MV  GI P+   ++ +I +
Sbjct: 326 RKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICA 385

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                 V+ ++ +  +M   G NPN+  + +++      G   +A   + +MI EG  PN
Sbjct: 386 YAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPN 445

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ Y++LIHGLC+    D+A  +  +M +     N   ++++ID   K G ++ + ++++
Sbjct: 446 IIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 505

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+  G  P+++ Y  ++   C      +A  L+  M      P+ VT+ T I G C   
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A+ L  +M      PNI TYN +L GL    R   A EL   I K G QL + TYN
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ILHG+C+  +  EA ++   + +   +L+  TFNI+I A  K G+++ A  L       
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 685

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G   PD+ +Y+ +   +   G ++E       M   G   +    N +VR L 
Sbjct: 686 G-LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLL 737



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 219/423 (51%), Gaps = 16/423 (3%)

Query: 152 EEAREL---AMRFGSGVSVY---NALINGLCKEHKIEEAFWLLCEMVDRG---IDPNVIT 202
           E+AR +    +R G G S+Y    AL +     H    A      M   G   + P V T
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALAD--VARHSPAAAVSRYNRMARAGAGKVTPTVHT 94

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y+ +I   C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSALIDGFAKA 318
              G +P+V +Y+ L+ GLC      EA+ + + M ++     PP+V +Y+ +++GF K 
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+   A   ++ M+  G  P+VV Y+ ++  LC+     +A  ++  M      P+ +T+
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N+ + G C  G+   A+  L +M+     PN+ TY+ L++ L +  R  EA ++   + K
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G++ +I TY T+L G    G +VE   LL  M+  G + D   FNI+I AY KQ KV+ 
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ +  ++R  G  NP+++ Y +++  +C SG + +A +Y ++M++EG+ PN   +  L+
Sbjct: 395 AMLVFSKMRQHG-LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453

Query: 559 RSL 561
             L
Sbjct: 454 HGL 456



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 229/452 (50%), Gaps = 5/452 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L++M+ +GV  +   + S++N   + G + +A K+F  + + GL+P +  Y  +L     
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +     ++ +   M R+G++P+   +NIL+ A  K  +VD A  +  +M   G  P+ V 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 138 YTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y T++  +CK G V++A     + +       + VY +LI+GLC   K ++A  L+ EM+
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           DRGI  N I +++II S C  G V  S  +   M   G  P+I ++ +L+ G  L G+  
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA+ L   M+  G  P++V Y TLI+G C    MD+A+++  +M  +   PN+ TY+ ++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G         A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   +  
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 653

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
             T TFN  I  L  CGR+D A  L         +P++ TY+ + + L+    ++E  +L
Sbjct: 654 LETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDL 713

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              +E+ G   +    N+I+  + + G +  A
Sbjct: 714 FLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 239/513 (46%), Gaps = 6/513 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + S+I +  +    ++A+++   + + G+ P    YN IL    +  +          M
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM 297

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + DG+EPNV TY+ L+  LCKN R   A K+   M  +G  PD  +Y T++      G +
Sbjct: 298 RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGAL 357

Query: 152 EEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            E     +L +R G      V+N LI    K+ K+++A  +  +M   G++PNV+ Y T+
Sbjct: 358 VEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTV 417

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC  G+V+ ++    QM   G  PNI  +TSL+ G     +  +A +L   M+  G 
Sbjct: 418 IDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGI 477

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N + ++++I   C  G + E+  +   M      P++ TY+ LIDG   AG +  A++
Sbjct: 478 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATK 537

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M+S G  P++V Y  ++   C+ +    A +L ++M      PN +T+N  ++GL 
Sbjct: 538 LLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 597

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R   A +L   + +      ++TYN +L GL + N   EA  +   +    +QL   
Sbjct: 598 HTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 657

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T+N ++  + + G + EA  L       G   D  T++++     +QG +     L   +
Sbjct: 658 TFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM 717

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
              G  + D     S++  +   G +  A  YL
Sbjct: 718 EENG-CSADSRMLNSIVRKLLQRGDITRAGTYL 749



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 126/504 (25%), Positives = 233/504 (46%), Gaps = 5/504 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L  M   GV      + S+++ Y   G  ++A+    ++R  G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ +++ L    R +    I+ +M + G+EP++ TY  LL+       +   +
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMH 361

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            LL  M   G  PD   +  ++ +  K  +V++A  +   MR       V  Y  +I+ L
Sbjct: 362 ALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVL 421

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++A     +M+D G+ PN+I Y+++I  LC     + +  ++ +M  RG   N 
Sbjct: 422 CKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S++  +   GR  E+  L++ M+R G  P+++ Y+TLI G C  G MDEA  +   
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P++ TY  LI+G+ +   +  A  ++  M+S+G SPN++ Y  +++ L     
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   +          T+N  + GLC     D A+++   +   +      T+N 
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++  LL+  R+ EA +L       G+  ++ TY+ +   +   G + E   L   M   G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721

Query: 476 TKLDAITFNIIIYAYCKQGKVNNA 499
              D+   N I+    ++G +  A
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRA 745


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  280 bits (716), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 277/527 (52%), Gaps = 12/527 (2%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A  AL  F+ +      P++  +NH+L  L     +S +  +Y+ M+  G+  +  T NI
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           LL  LC  NR+   +     +  +G +P+ V+Y T++  +C   ++ EA  L +R     
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 164 ---GVSVYNALINGLCKEHKIEEAFWLLCEMVDR------GIDPNVITYSTIISSLCDVG 214
               V  Y  LI GLC    I  A  L  EM++          PNVITY+ I+  LC VG
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             + +  +  +M  +G  P+I S+ SL+ G+   G+  E+  L + M+ +G  P++V ++
Sbjct: 230 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI  LC  G + EA  +   M E+   P++ TY++LI+GF   G+L  A +++  M S 
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GC P+V++Y  ++    +     +A  L  +M      PN +T+++ +KG+   G+VD A
Sbjct: 350 GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            KL   MK +    N  TY   LDGL + + + EA +L TE++    +L I   N ++ G
Sbjct: 410 KKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDG 469

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+AG +  A++L  K+  EG + + +T+ I+I+ +C++G+V+ A  L+ ++   G   P
Sbjct: 470 LCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG-CTP 528

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           DII+Y +L+ G   S  ++E    L +M  + + P+  T +++V  L
Sbjct: 529 DIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 575



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 251/497 (50%), Gaps = 12/497 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++   ++    Q   ++ ++R  GL       N +L+ L   NR       ++ + 
Sbjct: 72  FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL 131

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G  PN+ TYN L+K LC  +R+  A +L + M   GC PD V+Y T++  +C  G + 
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191

Query: 153 EARELAMRFGSGVS-----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            A +L     + +S            YN +++GLCK  + +EA  L  EM  +G+ P++I
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           +Y+++I   C  G  E S  +L +M  +G  P++ +F  L+      G+  EA  L   M
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I  G +P++V Y++LI G C  G ++ A  +   M    C P+V +Y+ LI+G++K   +
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A +++N M+  G  PNV+ Y  ++K +        A  L   M       N+ T+  F
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GLC    +  AMKL  ++K       I   N L+DGL +  +++ A+EL  ++   G 
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+VTY  ++HG CR G V +A  L+ KM   G   D IT+N ++  + +  K+   +Q
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQ 551

Query: 502 LLDRIRGGGEWNPDIIS 518
           LL R+    + +PD I+
Sbjct: 552 LLHRM-AQKDVSPDAIT 567



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 257/500 (51%), Gaps = 11/500 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM++ G+S        ++N    V    +    F  I   G  P +  YN ++  L 
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLC 150

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK------G 130
            E+R S    ++  M++ G  P+V TY  L+K LC    ++ A KL  EM N        
Sbjct: 151 MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEIN 210

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
           C P+ ++Y  IV  +CK+G+ +EA++L     +      +  YN+LI+G C   K EE+ 
Sbjct: 211 CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESK 270

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM+D+G+ P+++T++ +I +LC  G V  +  +LG M   G  P++ ++ SL++G+
Sbjct: 271 RLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 330

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            + G  + A +L+  M  +G  P+V++Y+ LI+G      ++EA+ +  +M      PNV
Sbjct: 331 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY +L+ G   AG +  A ++++ M ++G + N   Y   +  LC+N+   +A  L  +
Sbjct: 391 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 450

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +   N        N  I GLC  G+++ A +L +++      PN+ TY  ++ G  R  +
Sbjct: 451 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQ 510

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           V +A  L+ ++E  G   +I+TYNT++ G   +  + E  QLL +M  +    DAIT +I
Sbjct: 511 VDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSI 570

Query: 486 IIYAYCKQGKVNNAIQLLDR 505
           ++    K  K    + LL R
Sbjct: 571 VVDMLSKDEKYQECLHLLPR 590



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 221/438 (50%), Gaps = 11/438 (2%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD------GMEPNVF 101
           +A ++F R+++ G  P V  Y  ++  L      ++   ++  M  D        +PNV 
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
           TYNI++  LCK  R D A +L  EM  +G  P  +SY +++   C  G+ EE++ L    
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   +  +N LI+ LCKE K+ EA  LL  M++ GI P+++TY+++I   C VG++
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            ++  +   M  +GC P++ S+  L+ GY    +  EA  L+N M+  G  PNV+ Y +L
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + G+   G +D+A  +   M+ +    N  TY   +DG  K   L  A +++  + S+  
Sbjct: 397 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 456

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
              +    C++  LC+      A  L EK++ E   PN VT+   I G C  G+VD A  
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+ +M+   C P+I TYN L+ G    N+++E  +L+  + +  +  + +T + ++  + 
Sbjct: 517 LIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLS 576

Query: 457 RAGMVVEAFQLLGKMLIE 474
           +     E   LL +  I+
Sbjct: 577 KDEKYQECLHLLPRFPIQ 594



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 180/363 (49%), Gaps = 5/363 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L ++MK +G+  S   + S+I+ +   G  E++ ++   + + GL+P +  +N +
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D L  E +      +   M   G+ P++ TYN L++  C    ++ A +L V M +KGC
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFW 186
            PD +SY  +++   K  +VEEA +L            V  Y++L+ G+    K+++A  
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L   M   GI  N  TY   +  LC    +  ++ +  ++        I +   L+ G  
Sbjct: 412 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 471

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+   A +L+ ++  EG  PNVV Y+ +IHG C  G +D+A  +  +ME N C P++ 
Sbjct: 472 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDII 531

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ L+ GF ++  L    Q+ +RM     SP+ +  + +V +L ++  + +   L+ + 
Sbjct: 532 TYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591

Query: 367 AFE 369
             +
Sbjct: 592 PIQ 594



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 5/297 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   + LL  M   G+      + S+I  +  VG    A ++F  +   G
Sbjct: 291 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 350

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  YN +++      +      +Y+ M   G  PNV TY+ LLK +    +VD A 
Sbjct: 351 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 410

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           KL   M   G A ++ +Y   +  +CK   + EA +L     S      +   N LI+GL
Sbjct: 411 KLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 470

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+E A+ L  ++ + G +PNV+TY+ +I   C  G V+ +  ++ +M   GC P+I
Sbjct: 471 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 530

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++ +L++G+    +  E   L +RM ++   P+ +  S ++  L  +    E + +
Sbjct: 531 ITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 587


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 162/540 (30%), Positives = 274/540 (50%), Gaps = 60/540 (11%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR-FSMINPI 87
           +  VF  V+ SY R+ L ++AL + +  +  G  P V  YN +LDA +   R  S    +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           +  M    + PNVFTYNIL++  C    +D A  L  +M  KGC P+ V+Y T++   CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 148 LGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR-------- 194
           L ++++     R +A++     +  YN +INGLC+E +++E  ++L EM  R        
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 195 ---------------------------GIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
                                      G+ P+VITY+++I S+C  GN+  ++  L QM 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           VRG  PN  ++T+L+ G+   G  +EA  +   M   GF P+VV Y+ LI+G C  G M+
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A++V   M+E    P+V +YS ++ GF ++ ++  A ++   M+  G  P+ + Y+ ++
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +  C+     +A  L E+M     PP+  T+   I   C  G ++ A++L ++M +   L
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 408 PNITTYNELLDGLLRVNRVKEAFELV----------------TEIEKCG-IQLNIVTYNT 450
           P++ TY+ L++GL + +R +EA  L+                T IE C  I+   V   +
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV--S 610

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G C  GM+ EA Q+   ML +  K D   +NI+I+ +C+ G +  A  L   +   G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 257/528 (48%), Gaps = 21/528 (3%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L  +M+ +G   +   + ++I+ Y ++   +   K+   +   GL+P +  YN 
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++ L  E R   ++ + + M R G   +  TYN L+K  CK      A  +  EM   G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKIEEAF 185
             P  ++YT+++ S+CK G +  A E    MR          Y  L++G  ++  + EA+
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L EM D G  P+V+TY+ +I+  C  G +E ++ +L  M  +G +P++ S++++L G+
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA  +   M+ +G  P+ + YS+LI G C      EA  +  +M     PP+ 
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ALI+ +   G+L  A Q+ N M+  G  P+VV Y+ ++  L + +   +A  L+ K
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580

Query: 366 MAFENCPPNTVTFNT---------------FIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           + +E   P+ VT++T                IKG C  G +  A ++ + M      P+ 
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           T YN ++ G  R   +++A+ L  E+ K G  L+ VT   ++  + + G V E   ++  
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           +L      +A    +++    ++G ++  + +L  +   G + P+ IS
Sbjct: 701 VLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG-FLPNGIS 747



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 2/194 (1%)

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR- 425
            ++ C   +  F+  +K       +D A+ ++   + +  +P + +YN +LD  +R  R 
Sbjct: 126 TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +  A  +  E+ +  +  N+ TYN ++ G C AG +  A  L  KM  +G   + +T+N 
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  YCK  K+++  +LL  +   G   P++ISY  ++ G+C  G M+E    L +M   
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304

Query: 546 GICPNFATWNVLVR 559
           G   +  T+N L++
Sbjct: 305 GYSLDEVTYNTLIK 318


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 171/542 (31%), Positives = 274/542 (50%), Gaps = 45/542 (8%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 92  CTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 144

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTT 140
            ++ +   M + G  PNVF+YNILLK LC  NR   A +LL  M + G  C PD VSYTT
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +                              ING  KE  +++A+    EM+DRGI PNV
Sbjct: 205 V------------------------------INGFFKEGDLDKAYGTYHEMLDRGILPNV 234

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY++II++LC    ++ ++ +L  M   G  PN  ++ S++ GY   G+  EA     +
Sbjct: 235 VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P+VV Y++L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+    + + M+ NG  PN   ++ ++    +     QA  +  KM  +   P+TVT+ T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GRV+ AM+  +QM      P    YN L+  L   ++  +A EL+ E+   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I L+ + +N+I+   C+ G V+E+ +L   M+  G K + IT++ +I  YC  GK++ A 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +LL  +   G   PD ++Y +L+ G C    M++A +  ++M + G+ P+  T+N++++ 
Sbjct: 535 KLLASMVSVG-MKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593

Query: 561 LF 562
           LF
Sbjct: 594 LF 595



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 153/553 (27%), Positives = 269/553 (48%), Gaps = 8/553 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LLQ M  +G  C   V  + +VIN + + G  ++A   ++ + + G+ P V  YN I+ A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAA 243

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           + ++M ++G+ PN  TYN ++   C + +   A   L +M + G  PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y +++  +CK G+  EAR++            ++ Y  L+ G   +  + E   LL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  GI PN   +S +I +    G V+ ++ +  +M  +G NP+  ++ +++      G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A   + +MI E   P  + Y++LIH LC     D+A  +  +M +     +   ++
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++ID   K G ++ + ++++ M+  G  PN++ Y+ ++   C      +A  L+  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT+NT I G C   R++ A+ L  +M+     P+I TYN +L GL +  R   A
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   I + G QL + TYN ILHG+C+  +  EA ++   + +   +L+  TFNI+I A
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             K G+ + A  L   +   G   PD+ +Y+ +   +   G ++E       M   G   
Sbjct: 664 LLKVGRNDEAKDLFAALSANG-LVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 722

Query: 550 NFATWNVLVRSLF 562
           N    N +VR L 
Sbjct: 723 NSRMLNSIVRKLL 735



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 255/515 (49%), Gaps = 8/515 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME--PNVFTYNILLKALCK 112
           R+ + G  P V  YN +L  L  ENR      +   M  DG +  P+V +Y  ++    K
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFK 211

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV----SV 167
              +D AY    EM ++G  P+ V+Y +I++++CK   +++A E L     +GV      
Sbjct: 212 EGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRT 271

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +  +   M 
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMT 331

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            RG  P I ++ +LL+GY   G   E   L + M+R G  PN   +S LI      G +D
Sbjct: 332 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVD 391

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A+ V  +M +    P+  TY  +I    K+G +  A + + +MI    SP  + Y  ++
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC  + + +A  LI +M       +T+ FN+ I   C  GRV  + KL D M +    
Sbjct: 452 HSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 511

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PNI TY+ L+DG     ++ EA +L+  +   G++ + VTYNT+++G C+   + +A  L
Sbjct: 512 PNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   D IT+NII+    +  +   A +L   I   G    ++ +Y  +L G+C
Sbjct: 572 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESG-TQLELSTYNIILHGLC 630

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +    EA    Q +    +     T+N+++ +L 
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 665



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 219/422 (51%), Gaps = 13/422 (3%)

Query: 151 VEEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVIT 202
            E+AR +    +R G G S+Y  N  +  + + H    A      M   G D   PN+ T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y  +I S C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCPPNVTTYSALIDGFAKAG 319
            + G +PNV +Y+ L+ GLC      EA+ +   M ++   CPP+V +Y+ +I+GF K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L  A   ++ M+  G  PNVV Y  ++  LC+     +A  ++  M      PN  T+N
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M      P++ TYN L+D L +  R  EA ++   + K 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   +   F+I+I AY KQGKV+ A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NPD ++Y +++  +C SG +++A  Y ++M++E + P    +N L+ 
Sbjct: 394 MLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 560 SL 561
           SL
Sbjct: 453 SL 454



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 232/453 (51%), Gaps = 5/453 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L++M  +GV      + S+++   + G   +A KMF  + + GLKP +  Y  +L    
Sbjct: 291 FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA 350

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +     ++ +   M R+G+ PN + ++IL+ A  K  +VD A  +  +M  +G  PD V
Sbjct: 351 TKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTV 410

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +CK G+VE+A     + +  R   G  VYN+LI+ LC   K ++A  L+ EM
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +DRGI  + I +++II S C  G V  S  +   M   G  PNI ++++L+ GY L G+ 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKM 530

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L   M+  G  P+ V Y+TLI+G C    M++A+ +  +ME +   P++ TY+ +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +      A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   + 
Sbjct: 591 LQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 650

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              T TFN  I  L   GR D A  L   +     +P++ TY+ + + L+    ++E  +
Sbjct: 651 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 710

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           L   +E+ G   N    N+I+  + + G +  A
Sbjct: 711 LFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 40/428 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G+  +  VF  +I +Y + G  +QA+ +F ++R+ GL P    Y  ++  L 
Sbjct: 361 LLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC 420

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R       +  M  + + P    YN L+ +LC  ++ D A +L++EM ++G   D +
Sbjct: 421 KSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI 480

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            + +I+ S CK G+V E+    +L +R G    +  Y+ LI+G C   K++EA  LL  M
Sbjct: 481 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASM 540

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G+ P+ +TY+T+I+  C +  +E +L +  +M   G +P+I ++  +L+G     RT
Sbjct: 541 VSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 600

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSN---------------------------- 283
             A +L+  +   G    +  Y+ ++HGLC N                            
Sbjct: 601 AAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 660

Query: 284 -------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                  G  DEA  +   +  N   P+V TYS + +   + G L     ++  M  NGC
Sbjct: 661 IGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N      +V+ L Q     +A + +  +  ++      T + F+  L G    ++   
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRF 780

Query: 397 LLDQMKQY 404
           L ++ K +
Sbjct: 781 LPEKYKSF 788



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +PN+  Y  ++   C         + +  +  +    + + F   +KG
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--I 441
           LC   R   AM + L +M Q  C+PN+ +YN LL GL   NR +EA EL+  +   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++V+Y T+++G  + G + +A+    +ML  G   + +T+N II A CK   ++ A++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAME 255

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +   G   P+  +Y S++ G C+SG  +EA  +L+KM ++G+ P+  T+N L+  L
Sbjct: 256 VLTSMVKNGVM-PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 562 FSN 564
             N
Sbjct: 315 CKN 317



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 40/318 (12%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G+      F S+I+S+ + G   ++ K+F  +   G+KP +  Y+ +
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTL 520

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D      +      + ++M   GM+P+  TYN L+   CK +R++ A  L  EM + G 
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFW 186
           +PD ++Y  I+  + +  +   A+EL +          +S YN +++GLCK +  +EA  
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +   +    +     T++ +I +L  VG                                
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVG-------------------------------- 668

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              R  EA DL+  +   G +P+V  YS +   L   G ++E   +   MEEN C  N  
Sbjct: 669 ---RNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSR 725

Query: 307 TYSALIDGFAKAGNLLGA 324
             ++++    + G++  A
Sbjct: 726 MLNSIVRKLLQRGDITRA 743



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 111/279 (39%), Gaps = 31/279 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL  M   G+      + ++IN Y ++   E AL +F  +   G+ P +  YN
Sbjct: 529 KMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYN 588

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L    R +    +Y  +   G +  + TYNI+L  LCKNN  D A ++   +   
Sbjct: 589 IILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL--- 645

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            C  D               Q+E               +N +I  L K  + +EA  L  
Sbjct: 646 -CLTDL--------------QLE------------TRTFNIMIGALLKVGRNDEAKDLFA 678

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +   G+ P+V TYS +  +L + G +E    +   M   GC  N     S+++  L  G
Sbjct: 679 ALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               A   +  MI E       + ++L   L S G   E
Sbjct: 739 DITRAG-TYLFMIDEKHFSLEASTASLFLDLLSGGKYQE 776


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 273/512 (53%), Gaps = 5/512 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 87  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   N +L+     NR S    +   M   G +P+ FT+N L+  L ++NR   A 
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            L+  M  KGC PD V+Y  +V+ +CK G ++ A  L  +   G     V +YN +I+ L
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    + +A  L  EM ++GI PNV+TY+++I  LC+ G    +  +L  M  R  NPN+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  EA  L++ MI+    P++  YS+LI+G C +  +DEA  +   
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PNV TY+ LI GF KA  +    +++  M   G   N V YT ++    Q   
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +   P+ +T++  + GLC  G+V+ A+ + + +++ +  P+I TYN 
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ N+VTY T++ G CR G+  EA  L  +M  EG
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
              D+ T+N +I A+ + G    + +L+  +R
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 278/540 (51%), Gaps = 13/540 (2%)

Query: 33  FISVINSYRRVGL-------AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           F  V   YR++ +        + A+ +F  + +    P++  ++ +L A+   N+F ++ 
Sbjct: 42  FSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVI 101

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +   M+  G+  N++TY+IL+   C+ +++  A  +L +M   G  PD V+  ++++  
Sbjct: 102 SLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161

Query: 146 CKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C   ++ +A  L      M +      +N LI+GL + ++  EA  L+  MV +G  P++
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY  +++ LC  G+++ +L +L +M      P +  + +++         ++A +L+  
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  PNVV Y++LI  LC+ G   +A  +   M E    PNV T+SALID F K G 
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+ A ++++ MI     P++  Y+ ++   C ++   +A  + E M  ++C PN VT+NT
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            IKG C   RVD  M+L  +M Q   + N  TY  L+ G  +      A  +  ++   G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  +I+TY+ +L G+C  G V  A  +   +     + D  T+NI+I   CK GKV +  
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            L   +   G   P++++YT+++ G C  G  +EA    ++M  EG  P+  T+N L+R+
Sbjct: 522 DLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 235/452 (51%), Gaps = 6/452 (1%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYN 169
           ++D A  L  +M      P  V ++ ++S+I K+ + +    L  +  + G+S     Y+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            LIN  C+  ++  A  +L +M+  G +P+++T +++++  C    +  ++ ++GQM   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  P+  +F +L+ G     R  EA  L +RM+ +G  P++V Y  +++GLC  G +D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +S+  +ME+    P V  Y+ +ID      N+  A  ++  M + G  PNVV Y  +++ 
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC    +  A  L+  M      PN VTF+  I      G++  A KL D+M +    P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TY+ L++G    +R+ EA  +   +       N+VTYNT++ G C+A  V E  +L  
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M   G   + +T+  +I+ + +  + +NA  +  ++   G   PDI++Y+ LL G+CN+
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCNN 479

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G ++ A +  + +    + P+  T+N+++  +
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 206/428 (48%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+   R   A +A+ +  R+   G +P +  Y  +++ L 
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +EP V  YN ++ ALC    V+ A  L  EM NKG  P+ V
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++ +L+KG+    R 
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLIHG       D A  V  QM  +   P++ TYS L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G +  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+ T + G C  G  + A  L  +MK+   LP+  TYN L+   LR      + E
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 593 LIREMRSC 600



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 218/419 (52%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M V+G       +  V+N   + G  + AL +  ++ +  ++P V IYN I+DAL 
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                +    +++ M   G+ PNV TYN L++ LC   R   A +LL +M  +   P+ V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +++ ++ +  K G++ EA +L            +  Y++LING C   +++EA  +   M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +   PNV+TY+T+I   C    V+  + +  +M  RG   N  ++T+L+ G+      
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ +M+ +G LP+++ YS L+ GLC+NG ++ A+ V   ++ +   P++ TY+ +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  KAG +     ++  +   G  PNVV YT M+   C+  +  +A +L  +M  E  
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+NT I+     G    + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 211/397 (53%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           ++ L++ + K +K +    L  +M + GI  N+ TYS +I+  C    +  +L +L +M 
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I +  SLL G+  G R  +A  L  +M+  G+ P+   ++TLIHGL  +    
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M    C P++ TY  +++G  K G++  A  +  +M      P VV Y  ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC     + A +L  +M  +   PN VT+N+ I+ LC  GR   A +LL  M + +  
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN 323

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I TY+++++G C    + EA  +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 383

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    + +T+N +I  +CK  +V+  ++L   +   G    + ++YT+L+ G  
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIHGFF 442

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +     A I  ++M+++G+ P+  T+++L+  L +N
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 194/383 (50%), Gaps = 1/383 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K+++A  L  +MV     P+++ +S ++S++  +   +  + +  QM   G + N+++++
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+  +    +   A  +  +M++ G+ P++V  ++L++G C    + +AVS+  QM E 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P+  T++ LI G  +      A  + +RM+  GC P++V Y  +V  LC+      A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL++KM      P  V +NT I  LC    V+ A+ L  +M      PN+ TYN L+  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L    R  +A  L++++ +  I  N+VT++ ++    + G +VEA +L  +M+      D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T++ +I  +C   +++ A  + + +    +  P++++Y +L+ G C +  + E     
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 540 QKMLNEGICPNFATWNVLVRSLF 562
           ++M   G+  N  T+  L+   F
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFF 442



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 87/189 (46%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    +  E D  Q + +QM  +GV      +  +++     G  E AL +F  ++   
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  YN +++ +    +      ++ ++   G++PNV TY  ++   C+    + A 
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            L  EM  +G  PD+ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 617 HDGRLDKSF 625


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  279 bits (713), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 281/557 (50%), Gaps = 21/557 (3%)

Query: 22  KVEGVSCSEGV---FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           K  G SC  G     + + + +  +   E A+ +F  +      P+V  +  ++  ++  
Sbjct: 33  KASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRM 92

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R  ++  +Y  M+R  +  +++++ IL+K  C  +++  A     ++   G  PD V++
Sbjct: 93  ERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTF 152

Query: 139 TTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T++  +C   +V EA  L  +         V  +  L+NGLC+E +I EA  LL  M++
Sbjct: 153 NTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTH 252
            G+ P  ITY TI+  +C +G+  ++L +L +M  +    PN+  +++++      GR  
Sbjct: 213 DGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHS 272

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M  +G  P++  Y+++I G CS+G   +A  +  +M E    P+V TY+ALI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    A ++++ M+  G  PN + Y+ M+   C+ N    A  +   MA + C 
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN +TFNT I G CG  R+D  M+LL +M +   + + TTYN L+ G   V  +  A +L
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI----------- 481
           + E+   G+  +IVT +T+L G+C  G + +A ++   M      LDA            
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I     +GK   A +L + +   G   PD I+Y+S++ G+C    + EA      
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDS 571

Query: 542 MLNEGICPNFATWNVLV 558
           M ++   PN  T+  L+
Sbjct: 572 MGSKSFSPNVVTFTTLI 588



 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 159/571 (27%), Positives = 283/571 (49%), Gaps = 20/571 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F +I + GL P V  +N +
Sbjct: 96  DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL 155

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S    ++  M      PNV T+  L+  LC+  R+  A  LL  M   G 
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAF 185
            P  ++Y TIV  +CK+G    A +L  +          V +Y+A+I+ LCK+ +  +A 
Sbjct: 216 QPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI P++ TY+++I   C  G    +  +L +M  R  +P++ ++ +L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA +L++ M+  G +PN + YS++I G C    +D A  + Y M    C PN+
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   +   Y  ++         + A  L+++
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT +T + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLLWGICNSGGMQ 533
               + +TF  +I  YCK G+V++ ++L   + R G   N   I+Y +L+ G    G + 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA--ITYITLICGFRKVGNIN 633

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            A    Q+M++ G+ P+  T   ++  L+S 
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSK 664



 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 242/493 (49%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA-ENRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+PT   Y  I+D +    +  S ++ +   
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM 245

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   + PNV  Y+ ++ +LCK+ R   A  L  EM  KG  PD  +Y +++   C  G+
Sbjct: 246 EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITYS+
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+PN+ +F +L+ GY    R  +  +L + M   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + +   Y+TLIHG    G ++ A+ +  +M  +   P++ T   L+DG    G L  A 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V  Y  ++  L     F +A  L E+M      P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++ D M      PN+ T+  L++G  +  RV +  EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  N +TY T++ G  + G +  A  +  +M+  G   D IT   ++     + 
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L++++
Sbjct: 666 ELKRAVAMLEKLQ 678



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 199/418 (47%), Gaps = 16/418 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +       Q L  +M+ +G+      + S+I  +   G    A ++   + E  
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN +++A + E +F     +Y  M   G+ PN  TY+ ++   CK NR+D A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +   M  KGC+P+ +++ T++   C   ++++  EL          +  + YN LI+G 
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-------- 227
                +  A  LL EM+  G+ P+++T  T++  LCD G ++ +L +   M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 228 ---VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                G  P++ ++  L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC   
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA  +   M   S  PNV T++ LI+G+ KAG +    +++  M   G   N + Y 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            ++    +    + A  + ++M      P+T+T    + GL     +  A+ +L++++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 1/166 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G   +  +++A +L +++ +     ++V +  ++  V R         L  KM  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             + D  +F I+I  +C   K+  A+    +I   G  +PD++++ +LL G+C    + E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG-LHPDVVTFNTLLHGLCVEDRVSE 167

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           A     +M      PN  T+  L+  L      +  V +LD +M +
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 169/547 (30%), Positives = 270/547 (49%), Gaps = 11/547 (2%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S    VF ++++     GL + A++   R+R+  + P  +  NHIL  L    +  ++  
Sbjct: 130 SALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRR 189

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++ ++      PNVFT+NI++  LCK   +  A  L V M   GC+PD V+Y +++    
Sbjct: 190 LFEHLP----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245

Query: 147 KLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G++EE   L          + V  YNALIN   K   IE+A+    EM   G+  NV+
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVV 305

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T ST + + C  G V  ++ +  QM VRG  PN  ++TSL+ G    GR  +A  L + M
Sbjct: 306 TLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEM 365

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           + +G +PNVV Y+ ++ GLC  G +  A  V   ME      N   Y+ LI G     N 
Sbjct: 366 VHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNS 425

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  + N M + G   +V  Y  ++  LC+     +A SL+ KM      PNTV + T 
Sbjct: 426 ERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTI 485

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +      G+   A+ LL ++      PN+ TY  L+DGL +   + EA     ++ + G+
Sbjct: 486 MDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGL 545

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N+  Y T++ G C+ G + +A  L+ +M+ +G  LD + +  +I  + KQG +  A  
Sbjct: 546 DPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFA 605

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L  ++   G    D+  YT  + G CN   MQEA   L +M+  GI P+   +N L+R  
Sbjct: 606 LKAKMIETG-LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRK- 663

Query: 562 FSNLGHL 568
           +  LG++
Sbjct: 664 YQKLGNM 670



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 235/475 (49%), Gaps = 5/475 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  VI+   + G   +A  +F R++  G  P V  YN ++D          +  + S M+
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G   +V TYN L+    K   ++ AY    EM   G   + V+ +T V + CK G V 
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 153 EAREL--AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EA +L   MR    +     Y +L++G CK  ++++A  LL EMV +G+ PNV+TY+ ++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC  G V  +  +L  M   G   N   +T+L+ G+ +   +  A DL N M  +G  
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            +V  Y TLI GLC    +DEA S+ ++M++    PN   Y+ ++D F KAG    A  +
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            +++  +G  PNVV Y  ++  LC+    ++A S  +KM      PN   + T I G C 
Sbjct: 502 LHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCK 561

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G +  A+ L+++M       +   Y  L+DG ++   ++ AF L  ++ + G+QL++  
Sbjct: 562 IGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYC 621

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           Y   + G C   M+ EA  +L +M+  G   D   +N +I  Y K G +  A  L
Sbjct: 622 YTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 221/442 (50%), Gaps = 5/442 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+  E++ V+ L+ +M+  G +     + ++IN + + G  E+A   F  ++  G
Sbjct: 240 LIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLG 299

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V   +  +DA   E        +++ M+  GM PN FTY  L+   CK  R+D A 
Sbjct: 300 VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAI 359

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM ++G  P+ V+YT +V  +CK G+V  A + L++   +GV     +Y  LI+G 
Sbjct: 360 VLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGH 419

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                 E A  LL EM ++G++ +V  Y T+I  LC V  ++ +  +L +M   G  PN 
Sbjct: 420 FMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNT 479

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+++  +   G+  EA  L +++   G  PNVV Y  LI GLC  GS+ EA+S   +
Sbjct: 480 VIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDK 539

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    PNV  Y+ LIDGF K G+L  A  + N M+  G S + V YT ++    +   
Sbjct: 540 MRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGD 599

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A +L  KM       +   +  FI G C    +  A  +L +M      P+ T YN 
Sbjct: 600 LQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNC 659

Query: 416 LLDGLLRVNRVKEAFELVTEIE 437
           L+    ++  ++EA  L  E+E
Sbjct: 660 LIRKYQKLGNMEEASSLQNEME 681



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 165/357 (46%), Gaps = 40/357 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM+V G+  +E  + S+++   + G  + A+ +   +   GL P V  Y  ++D L 
Sbjct: 326 LFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLC 385

Query: 77  AENRFSMINPIYS-----------------------------------NMKRDGMEPNVF 101
            E + ++ + + S                                    MK  GME +V 
Sbjct: 386 KEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVS 445

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            Y  L+  LCK  ++D A  LL +M + G  P+ V YTTI+ +  K G+  EA  L  + 
Sbjct: 446 LYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKI 505

Query: 162 GSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y ALI+GLCK   I EA     +M + G+DPNV  Y+T+I   C +G++
Sbjct: 506 PDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSL 565

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             ++ ++ +M  +G + +   +TSL+ G++  G    A  L  +MI  G   ++  Y+  
Sbjct: 566 SKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCF 625

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           I G C+   M EA  V  +M      P+ T Y+ LI  + K GN+  AS + N M S
Sbjct: 626 ISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 56/341 (16%)

Query: 248 GGRTHEASDLWNRMIREGF--------LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           G R H A+ L + + R           LP+V  + TL+  L  +G +D+AV    ++ + 
Sbjct: 105 GHRPHLAASLVDILHRAALALGPHRSALPSV--FDTLLSLLADHGLLDDAVRALARVRQL 162

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
             PPN  T                 + I  R+  N                       + 
Sbjct: 163 RVPPNTRT----------------CNHILLRLARN-----------------------RQ 183

Query: 360 HSLIEKMAFENCP-PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
             L+ ++ FE+ P PN  TFN  I  LC  G +  A  L  +MK   C P++ TYN L+D
Sbjct: 184 GGLVRRL-FEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLID 242

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G  +   ++E   LV+E+ K G   ++VTYN +++   + G + +A+   G+M   G   
Sbjct: 243 GYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMA 302

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           + +T +  + A+CK+G V  A++L  ++R  G   P+  +YTSL+ G C +G + +A + 
Sbjct: 303 NVVTLSTFVDAFCKEGLVREAMKLFAQMRVRG-MMPNEFTYTSLVDGTCKAGRLDDAIVL 361

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           L +M+++G+ PN  T+ V+V  L       G V + DD+++
Sbjct: 362 LDEMVHQGLVPNVVTYTVMVDGLCKE----GKVAVADDVLS 398


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 167/525 (31%), Positives = 277/525 (52%), Gaps = 13/525 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R  LAE A ++       G  P V +   ++  L    R S    +    +  G   +VF
Sbjct: 52  RDDLAEAA-RLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVF 110

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---A 158
            YN L+   C+  R+D A +L+  M      PDA +YT I+  +C  G+V +A  L    
Sbjct: 111 AYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALALLDDM 167

Query: 159 MRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           ++ G   SV  Y  L+  +CK     EA  +L EM  +G  PN++TY+ II+ +C  G V
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 227

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  IL ++   G  P+I S+T++LKG     R  +   L+  M+ +  +PN V +  L
Sbjct: 228 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 287

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +   C  G ++ A+ V  QM ++ C PN T  + +I+   K G +  A    N M   GC
Sbjct: 288 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 347

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P+ ++YT +++ LC+   +  A  L+ +M  +NCPPN VTFNTFI  LC  G ++ A+K
Sbjct: 348 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 407

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L++ M +Y C   I TYN L+ G     RV  A EL   +     + N +TY T+L G+C
Sbjct: 408 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLC 464

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            A  +  A +LL  M+ +   L+A+TFN+++  +C++G V  A++L++++   G   P++
Sbjct: 465 HAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG-CTPNL 523

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I++ +LL GI      +EA   L  ++++G+  +  T++ +V  L
Sbjct: 524 ITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 568



 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 160/566 (28%), Positives = 277/566 (48%), Gaps = 12/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +        +L+  +  G       + +++  Y R G  + A ++   I    
Sbjct: 80  LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRL---IASMP 136

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  I+  L    R      +  +M + G +P+V TY +LL+A+CK++    A 
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
            +L EM  KGC P+ V+Y  I++ +C+ G+V++A+E+  R     F   +  Y  ++ GL
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + ++   L  EMVD+   PN +T+  ++   C  G VE ++ +L QM   GC PN 
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                ++      GR  +A D  N M   G  P+ ++Y+T++ GLC  G  + A  +  +
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M   +CPPN  T++  I    + G +  A ++   M   GCS  +V Y  +V   C    
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR 436

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   +    C PNT+T+ T + GLC   R+D A +LL  M Q +C  N  T+N 
Sbjct: 437 VDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+    +   V+EA ELV ++ + G   N++T+NT+L G+ +     EA +LL  ++ +G
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
             LD IT++ ++    ++ +   AIQ+L  ++  G   P +  Y  +L+ +C      +A
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG-MRPKVGMYNKILFALCKRCETDQA 612

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
             +   M++ G  PN +T+ +L+  L
Sbjct: 613 IDFFAYMVSNGCMPNESTYIILIEGL 638



 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 277/543 (51%), Gaps = 12/543 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D  + L+  M V   + +    I  +    RVG    AL +   + + G +P+V  Y 
Sbjct: 124 RLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVG---DALALLDDMLQRGCQPSVVTYT 180

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+A+   + F     +   M+  G  PN+ TYN+++  +C+  RVD A ++L  + + 
Sbjct: 181 VLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSY 240

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEA 184
           G  PD VSYTT++  +C   + ++ + L         V     ++ L+   C+   +E A
Sbjct: 241 GFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERA 300

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M   G  PN    + +I+++C  G V+ +   L  M + GCNP+  S+T++L+G
Sbjct: 301 IQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRG 360

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR   A +L   M+R+   PN V ++T I  LC  G +++A+ +   M E  C   
Sbjct: 361 LCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVG 420

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+AL+ GF   G +  A +++N +    C PN + YT ++  LC       A  L+ 
Sbjct: 421 IVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLA 477

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  ++CP N VTFN  +   C  G V+ AM+L++QM ++ C PN+ T+N LLDG+ +  
Sbjct: 478 GMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDC 537

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             +EA EL+  +   G+ L+ +TY++++  + R     EA Q+L  +   G +     +N
Sbjct: 538 NSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYN 597

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            I++A CK+ + + AI     +   G   P+  +Y  L+ G+ + G ++EA   L ++  
Sbjct: 598 KILFALCKRCETDQAIDFFAYMVSNG-CMPNESTYIILIEGLAHEGLLKEARYVLSELYA 656

Query: 545 EGI 547
           +G+
Sbjct: 657 KGV 659



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/515 (25%), Positives = 238/515 (46%), Gaps = 8/515 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  +     LL  M   G   S   +  ++ +  +     +A+ +   +R  G
Sbjct: 147 IIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG 206

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN I++ +  E R      I + +   G +P++ +Y  +LK LC   R D   
Sbjct: 207 CTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVK 266

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L  EM +K C P+ V++  +V   C+ G VE A ++  +          ++ N +IN +
Sbjct: 267 VLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAI 326

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+ ++++A+  L  M   G +P+ I+Y+T++  LC  G  E +  +L +M  + C PN 
Sbjct: 327 CKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNE 386

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F + +      G   +A  L   M   G    +V Y+ L+HG C  G +D A+ +   
Sbjct: 387 VTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN 446

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +    C PN  TY+ L+ G   A  L  A+++   MI   C  N V +  +V   CQ   
Sbjct: 447 L---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGF 503

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L+ +M    C PN +TFNT + G+      + A++LL  +       +  TY+ 
Sbjct: 504 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 563

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++D L R +R +EA +++  ++  G++  +  YN IL  +C+     +A      M+  G
Sbjct: 564 VVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 623

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
              +  T+ I+I     +G +  A  +L  +   G
Sbjct: 624 CMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 43/291 (14%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M  +    +E  F + I    + GL EQA+K+   + E+G    +  YN ++    
Sbjct: 373 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R      +++N+     EPN  TY  LL  LC   R+D A +LL  M  K C  +AV
Sbjct: 433 VQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAV 489

Query: 137 SYTTIVSSICKLGQVEEARELA---MRFG------------------------------- 162
           ++  +VS  C+ G VEEA EL    M  G                               
Sbjct: 490 TFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGL 549

Query: 163 --SGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GVS+    Y+++++ L +E + EEA  +L  + D G+ P V  Y+ I+ +LC     
Sbjct: 550 VSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCET 609

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           + ++     M   GC PN  ++  L++G    G   EA  + + +  +G L
Sbjct: 610 DQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 4/164 (2%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L  L+  + + EA  LV      G   ++     ++  +CR G   +A ++L      G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            +D   +N ++  YC+ G+++ A +L+  +       PD  +YT ++ G+C+ G + +A 
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASM----PVPPDAYTYTPIIRGLCDRGRVGDAL 161

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             L  ML  G  P+  T+ VL+ ++  + G    + +LD++ A 
Sbjct: 162 ALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAK 205


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 162/530 (30%), Positives = 280/530 (52%), Gaps = 25/530 (4%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV     +  S++   + V  AE   K++  +   G+   V  YN ++    A     M 
Sbjct: 166 GVLSYNAILDSIVRCRKPVIFAE---KVYREMIASGVSLNVFSYNILIRGFCAAGNLEMG 222

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
              +  M+R+   PNV TYN ++ A CK  R+D A+KLL  MG +G  P+ ++Y  +++ 
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282

Query: 145 ICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +C++G++EE      E+  + F      YN L+NG CK     +A  L  EM+  G+ P+
Sbjct: 283 LCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPD 342

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY+++I+++C  GN+  ++    QM VRG  PN  ++TSL+ G+   G   EA  +W+
Sbjct: 343 VVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWD 402

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MIR GF P +V Y+ L++G C +G M+EA+ +   ME     P+V +YS +I GF +  
Sbjct: 403 EMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ 462

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L  A Q+   M+  G SP+ + Y+ +++ LC+    ++A  L ++M  ++  P+  T+ 
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + I G C  G ++ A+ L D+M +   LP+  TYN L++GL +  R +EA  L+ ++   
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYD 582

Query: 440 GIQLNIVTYNTILH---------------GVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
               N +TY+T++                G C  G++ EA Q+   M+    K +   +N
Sbjct: 583 ESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYN 642

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           +II+ +C+ G V+ A +L   +   G + P  ++  +L+  +  S GM E
Sbjct: 643 VIIHGHCRDGNVHKAHKLYKEMVDFG-FIPHTVTIIALVKALY-SEGMDE 690



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 166/586 (28%), Positives = 293/586 (50%), Gaps = 24/586 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSC--SEGVFISVINSYRRVGLAEQALKMFYRIRE 58
           + + L E    +   Y  Q +K     C  S  VF  V+ S   +   E+AL +    + 
Sbjct: 101 LAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKL 160

Query: 59  FGLKPTVKIYNHILDALLA-ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            G  P V  YN ILD+++           +Y  M   G+  NVF+YNIL++  C    ++
Sbjct: 161 NGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLE 220

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALI 172
              +   EM    C P+ V+Y T++ + CKL +++EA +L    G       +  YN +I
Sbjct: 221 MGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVI 280

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NGLC+  +IEE   +L EM  +G  P+ +TY+T+++  C VGN   +L +  +M   G  
Sbjct: 281 NGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLP 340

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ ++TSL+      G  + A + +++M   G  PN V Y++LI+G    G MDEA  +
Sbjct: 341 PDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M  +  PP + TY+AL++G   +G +  A  +   M   G SP+VV+Y+ ++   C+
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR 460

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A  +  +M  +   P+ +T+++ I+GLC   R++ A  L  +M     LP+  T
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFT 520

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  L++G  +   + EA  L  E+ K G   + VTYN +++G+ +     EA +LL K+ 
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF 580

Query: 473 IEGTKLDAITFNIIIYA---------------YCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            + +  + IT++ +I +               +C +G +N A Q+ + +    +  P+  
Sbjct: 581 YDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQ-KPNEA 639

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            Y  ++ G C  G + +A    ++M++ G  P+  T   LV++L+S
Sbjct: 640 VYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYS 685



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 246/498 (49%), Gaps = 24/498 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +VI +Y ++   ++A K+   +   GL+P +  YN +++ L    R    + + + M R 
Sbjct: 243 TVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRK 302

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+  TYN L+   CK      A  L  EM   G  PD V+YT++++++CK G +  A
Sbjct: 303 GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRA 362

Query: 155 RELAMRFG------SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
            E   +        +GV+ Y +LING  ++  ++EA+ +  EM+  G  P ++TY+ +++
Sbjct: 363 MEFFDQMHVRGLRPNGVT-YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLN 421

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G +E ++G+L  M  +G +P++ S+++++ G+        A  +   M+ +G  P
Sbjct: 422 GHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSP 481

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           + + YS+LI GLC    ++EA  +  +M   S  P+  TY++LI+G+ K G+L  A  + 
Sbjct: 482 DAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLH 541

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI------ 382
           + MI  G  P+ V Y  ++  L +     +A  L+ K+ ++   PN +T++T I      
Sbjct: 542 DEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDI 601

Query: 383 ---------KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
                    KG C  G ++ A ++ + M +    PN   YN ++ G  R   V +A +L 
Sbjct: 602 EFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLY 661

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL-DAITFNIIIYAYCK 492
            E+   G   + VT   ++  +   GM  E   L+ + ++   KL DA     ++    K
Sbjct: 662 KEMVDFGFIPHTVTIIALVKALYSEGM-DEQLNLVIRDILRSCKLSDAELSKALVQINHK 720

Query: 493 QGKVNNAIQLLDRIRGGG 510
           +G ++    LL  +   G
Sbjct: 721 EGNIDAVFNLLTEMAKDG 738



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 205/434 (47%), Gaps = 33/434 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G+      + S+IN+  + G   +A++ F ++   GL+P    Y  +++   
Sbjct: 330 LHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFS 389

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        I+  M R G  P + TYN LL   C + R++ A  LL  M  KG +PD V
Sbjct: 390 QKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVV 449

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           SY+TI++  C+  +++ A ++ A     GVS     Y++LI GLC++ ++ EA  L  EM
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++ + P+  TY+++I+  C  G++  +L +  +M  +G  P+  ++  L+ G     RT
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L  ++  +  +PN + Y TLI   CS+      V                   AL
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIES-CSDIEFKSVV-------------------AL 609

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF   G +  A Q++  MI     PN   Y  ++   C++   H+AH L ++M     
Sbjct: 610 IKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGF 669

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR----VK 427
            P+TVT    +K L   G +D  + L+ +     C     +  EL   L+++N     + 
Sbjct: 670 IPHTVTIIALVKALYSEG-MDEQLNLVIRDILRSC---KLSDAELSKALVQINHKEGNID 725

Query: 428 EAFELVTEIEKCGI 441
             F L+TE+ K G 
Sbjct: 726 AVFNLLTEMAKDGF 739


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 275/519 (52%), Gaps = 6/519 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  + +    P++  +N +L A+   N+F ++  +   M+   +  ++++YNIL
Sbjct: 62  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           +   C+ +++  A  +L +M   G  PD V+ +++++  C   ++ EA  L      M +
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 +N LI+GL   +K  EA  L+  MV RG  P++ TY T+++ LC  G+++ +L 
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M       ++  +T+++         ++A +L+  M  +G  PNVV Y++LI  LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           + G   +A  +   M E    PNV T+SALID F K G L+ A ++++ MI     P++ 
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++   C ++   +A  + E M  ++C PN VT+NT IKG C   RV+  M+L  +M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            Q   + N  TYN L+ GL +      A ++  ++   G+  +I+TY+ +L G+C+ G +
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  +   +     + D  T+NI+I   CK GKV +   L   +   G   P++I YT+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTT 540

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++ G C  G  +EA    ++M  +G  PN  T+N L+R+
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 266/507 (52%), Gaps = 7/507 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R      AL +  ++ + G +P +   + +L+      R S    +   M    
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +PN  T+N L+  L  +N+   A  L+  M  +GC PD  +Y T+V+ +CK G ++ A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 156 ELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L  +   G     V +Y  +I+ LC    + +A  L  EM ++GI PNV+TY+++I  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C+ G    +  +L  M  R  NPN+ +F++L+  ++  G+  EA  L++ MI+    P++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             YS+LI+G C +  +DEA  +   M    C PNV TY+ LI GF KA  +    +++  
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G   N V Y  +++ L Q      A  + +KM  +  PP+ +T++  + GLC  G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+ + + +++ +  P+I TYN +++G+ +  +V++ ++L   +   G++ N++ Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G CR G+  EA  L  +M  +GT  ++ T+N +I A  + G    + +L+  +R  G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFI 537
                  S  S++  + + G ++++++
Sbjct: 601 FVGD--ASTISMVINMLHDGRLEKSYL 625



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 208/429 (48%), Gaps = 5/429 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM V     +   F ++I+       A +A+ +  R+   G +P +  Y  +++ L 
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +E +V  Y  ++ ALC    V+ A  L  EM NKG  P+ V
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 291

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++ +L+KG+    R 
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLI GL   G  D A  +  +M  +  PP++ TYS L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN + + T I G C  G  + A  L  +MK+   LPN  TYN L+   LR      + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591

Query: 432 LVTEIEKCG 440
           L+ E+  CG
Sbjct: 592 LIKEMRSCG 600



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 148 LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            G++ ++R L       +  +N L++ + K +K +    L   M +  I  ++ +Y+ +I
Sbjct: 68  FGEMVQSRPLP-----SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C    +  +L +LG+M   G  P+I + +SLL GY  G R  EA  L ++M    + 
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN V ++TLIHGL  +    EAV++  +M    C P++ TY  +++G  K G++  A  +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
             +M       +VV YT ++  LC     + A +L  +M  +   PN VT+N+ I+ LC 
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GR   A +LL  M + +  PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I T
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y+++++G C    + EA  +   M+ +    + +T+N +I  +CK  +V   ++L   + 
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G    + ++Y +L+ G+  +G    A    +KM+++G+ P+  T+++L+  L
Sbjct: 423 QRGLVG-NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 193/383 (50%), Gaps = 1/383 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K+++A  L  EMV     P+++ ++ ++S++  +   +  + +  +M     + +++S+ 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+  +    +   A  +  +M++ G+ P++V  S+L++G C    + EAV++  QM   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PN  T++ LI G         A  + +RM++ GC P++  Y  +V  LC+      A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL++KM       + V + T I  LC    V+ A+ L  +M      PN+ TYN L+  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L    R  +A  L++++ +  I  N+VT++ ++    + G +VEA +L  +M+      D
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T++ +I  +C   +++ A  + + +    +  P++++Y +L+ G C +  ++E     
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 540 QKMLNEGICPNFATWNVLVRSLF 562
           ++M   G+  N  T+N L++ LF
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLF 441



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 5/367 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L ++ +ID    LL++M+   +     ++ ++I++         AL +F  +   G++P 
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN ++  L    R+S  + + S+M    + PNV T++ L+ A  K  ++  A KL  
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
           EM  +   PD  +Y+++++  C   +++EA+ +     S      V  YN LI G CK  
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++EE   L  EM  RG+  N +TY+T+I  L   G+ + +  I  +M   G  P+I +++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            LL G    G+  +A  ++  + +    P++  Y+ +I G+C  G +++   +   +   
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PNV  Y+ +I GF + G    A  ++  M  +G  PN   Y  +++   ++     +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589

Query: 360 HSLIEKM 366
             LI++M
Sbjct: 590 AELIKEM 596



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 36/354 (10%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L +  LL  +  +A DL+  M++   LP++V ++ L+  +      D  +S+  +M+   
Sbjct: 51  LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ +Y+ LI+ F +   L  A  +  +M+  G  P++V  + ++   C      +A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 361 SLIEKMAFENCPPNTVTFNTFIK-----------------------------------GL 385
           +L+++M      PNTVTFNT I                                    GL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G +D A+ LL +M++ +   ++  Y  ++D L     V +A  L TE++  GI+ N+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYN+++  +C  G   +A +LL  M+      + +TF+ +I A+ K+GK+  A +L D 
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           +      +PDI +Y+SL+ G C    + EA    + M+++   PN  T+N L++
Sbjct: 351 MIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 36/190 (18%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++D A+ L  +M Q   LP+I  +N+LL  + ++N+    F+LV  + +    L I    
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK----FDLVISLGERMQNLRI---- 111

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
                                        D  ++NI+I  +C++ ++  A+ +L ++   
Sbjct: 112 ---------------------------SYDLYSYNILINCFCRRSQLPLALAVLGKMMKL 144

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++ +SLL G C+   + EA   + +M      PN  T+N L+  LF +     
Sbjct: 145 G-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203

Query: 570 PVYILDDIMA 579
            V ++D ++A
Sbjct: 204 AVALIDRMVA 213


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  278 bits (712), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 161/544 (29%), Positives = 288/544 (52%), Gaps = 9/544 (1%)

Query: 26  VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL---AENRFS 82
            S S+ +  + I +Y + G    A ++F +++   L+P +   N +L++L+   + +  S
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
                +++  + G+ PNV T+NI++   C  N+   A + L  MG   C+PD V+Y TI+
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250

Query: 143 SSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
            ++CK G++ +AR+L M   S       + YN L+ G CK   ++EA  ++  M    + 
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+V TY+ +I+ LC+ G +E +  +  +M      P++ S+ +L+ G L   +  EA  L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              M  +G  PN V ++ ++   C  G MD+A +   +MEE+   P+  TY+ LI+G+ K
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           AGN+  A +  + M       + V    +++ LC+     +A+ L+          + V+
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + T I G    G VD A+KL D+MK+ E +P+  TYN ++ GL +  + ++A   + E+ 
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G+  +  TYNTILHG CR G V +AFQ   KM+    K D  T NI++   C +G + 
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLE 610

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A++L +     G+   D ++Y +L+  +C  G + +AF  L +M  + + P+  T+N +
Sbjct: 611 KALKLFNTWVSKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669

Query: 558 VRSL 561
           + +L
Sbjct: 670 ITAL 673



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 251/511 (49%), Gaps = 28/511 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K  +   + LL  MK  G+  +   +  ++  Y ++G  ++A  +   + +  
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  YN +++ L  E R      +   M+   + P+V +YN L+    + +++  A+
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           KLL EM  KG  P+AV++  +V   CK G++++A     +     F      YN LING 
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + EAF  + EM  + +  + +T +TI+ +LC    +E +  +L     RG   + 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ GY   G    A  LW+ M  +  +P+ V Y+ +I GLC  G  ++A+S   +
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E+   P+ TTY+ ++ G+ + G++  A Q  N+M+ N   P+V     +++ LC   +
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGV 608

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L      +    +TVT+NT I  LC  GR+D A  LL +M++ E  P+  TYN 
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCG------IQLN-----------------IVTYNTIL 452
           ++  L    R++EA E ++++ + G      +QL+                  V Y+  +
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWI 728

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +C  G   +A ++ G+   +G  +D  T+
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKSTY 759



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 181/338 (53%), Gaps = 6/338 (1%)

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           +R  +P+     + +  Y+  G+ H A  ++ +M R    PN++  +TL++ L    S  
Sbjct: 128 LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPS-S 186

Query: 288 EAVSVSYQMEENSCP----PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            +VS S +   ++      PNV T++ +I G+        A +  N M    CSP+ V Y
Sbjct: 187 HSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY 246

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+      A  L+  M      PN  T+N  + G C  G +  A  +++ M Q
Sbjct: 247 NTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              LP++ TYN L++GL    R++EAF+L  E+E   +  ++V+YNT+++G      + E
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           AF+LL +M  +G K +A+T NI++  YCK+GK+++A   + ++   G ++PD ++Y +L+
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG-FSPDCVTYNTLI 425

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G C +G M EAF  + +M  + +  +  T N ++R+L
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 42/307 (13%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L  +MK + +  S   +  +I    + G  EQA+     + E GL P    YN 
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           IL     E         ++ M  +  +P+VFT NILL+ LC    ++ A KL     +KG
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKG 623

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            A D V+Y T+++S+CK G                              ++++AF LL E
Sbjct: 624 KAIDTVTYNTLITSLCKEG------------------------------RLDDAFNLLSE 653

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++ + P+  TY+ II++L D G +  +   + +M  +G  P+           +L   
Sbjct: 654 MEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD----------QVLQLD 703

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            +E   +      E    + VAYS  I  LC+ G   +A+ +  + ++     + +TY  
Sbjct: 704 KNET--VVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYIN 761

Query: 311 LIDGFAK 317
           L+DG  K
Sbjct: 762 LMDGLIK 768


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 161/544 (29%), Positives = 288/544 (52%), Gaps = 9/544 (1%)

Query: 26  VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL---AENRFS 82
            S S+ +  + I +Y + G    A ++F +++   L+P +   N +L++L+   + +  S
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
                +++  + G+ PNV T+NI++   C  N+   A + L  MG   C+PD V+Y TI+
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250

Query: 143 SSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
            ++CK G++ +AR+L M   S       + YN L+ G CK   ++EA  ++  M    + 
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+V TY+ +I+ LC+ G +E +  +  +M      P++ S+ +L+ G L   +  EA  L
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              M  +G  PN V ++ ++   C  G MD+A +   +MEE+   P+  TY+ LI+G+ K
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           AGN+  A +  + M       + V    +++ LC+     +A+ L+          + V+
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + T I G    G VD A+KL D+MK+ E +P+  TYN ++ GL +  + ++A   + E+ 
Sbjct: 491 YGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELL 550

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G+  +  TYNTILHG CR G V +AFQ   KM+    K D  T NI++   C +G + 
Sbjct: 551 ESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLE 610

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A++L +     G+   D ++Y +L+  +C  G + +AF  L +M  + + P+  T+N +
Sbjct: 611 KALKLFNTWVSKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAI 669

Query: 558 VRSL 561
           + +L
Sbjct: 670 ITAL 673



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/511 (27%), Positives = 251/511 (49%), Gaps = 28/511 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K  +   + LL  MK  G+  +   +  ++  Y ++G  ++A  +   + +  
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  YN +++ L  E R      +   M+   + P+V +YN L+    + +++  A+
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           KLL EM  KG  P+AV++  +V   CK G++++A     +     F      YN LING 
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGY 428

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + EAF  + EM  + +  + +T +TI+ +LC    +E +  +L     RG   + 
Sbjct: 429 CKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ GY   G    A  LW+ M  +  +P+ V Y+ +I GLC  G  ++A+S   +
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E+   P+ TTY+ ++ G+ + G++  A Q  N+M+ N   P+V     +++ LC   M
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGM 608

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L      +    +TVT+NT I  LC  GR+D A  LL +M++ E  P+  TYN 
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCG------IQLN-----------------IVTYNTIL 452
           ++  L    R++EA E ++++ + G      +QL+                  V Y+  +
Sbjct: 669 IITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWI 728

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +C  G   +A ++ G+   +G  +D  T+
Sbjct: 729 KELCTEGKYKDAMRIFGESKQKGITVDKSTY 759



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 181/338 (53%), Gaps = 6/338 (1%)

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           +R  +P+     + +  Y+  G+ H A  ++ +M R    PN++  +TL++ L    S  
Sbjct: 128 LRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPS-S 186

Query: 288 EAVSVSYQMEENSCP----PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            +VS S +   ++      PNV T++ +I G+        A +  N M    CSP+ V Y
Sbjct: 187 HSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY 246

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+      A  L+  M      PN  T+N  + G C  G +  A  +++ M Q
Sbjct: 247 NTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              LP++ TYN L++GL    R++EAF+L  E+E   +  ++V+YNT+++G      + E
Sbjct: 307 NNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISE 366

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           AF+LL +M  +G K +A+T NI++  YCK+GK+++A   + ++   G ++PD ++Y +L+
Sbjct: 367 AFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG-FSPDCVTYNTLI 425

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G C +G M EAF  + +M  + +  +  T N ++R+L
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 28/264 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L  +MK + +  S   +  +I    + G  EQA+     + E GL P    YN 
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           IL     E         ++ M  +  +P+VFT NILL+ LC    ++ A KL     +KG
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
            A D V+Y T+++S+CK G++++A  L         G     YNA+I  L    +I EA 
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 186 WLLCEMVDRGIDP-----------------------NVITYSTIISSLCDVGNVETSLGI 222
             + +M+++G  P                       + + YS  I  LC  G  + ++ I
Sbjct: 684 EFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRI 743

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYL 246
            G+   +G   +  ++ +L+ G +
Sbjct: 744 FGESKQKGITVDKSTYINLMDGLI 767


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 170/592 (28%), Positives = 288/592 (48%), Gaps = 66/592 (11%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L+ +KV G         + I+ +R  G  EQA          G +  V  YN +++
Sbjct: 89  VAAVLRSLKVTG---------TAISFFRWAG--EQA----------GFQHDVFTYNCLMN 127

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L+AE  +S    I+  M + G+ PN F++NIL+++  +  R D A      M  K C P
Sbjct: 128 LLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP 187

Query: 134 DAVSYTTIVSSICKLGQVEEARE-----LAMRF-GSGVSVYNALINGLCKEHKIEEAFWL 187
           D  ++  +V  +CK G  E+A E     +AM F     +++ A++  L K  +++EA  +
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             +M   G  P+ I Y+T+I  L   G+ + +L +L  M  + C P   ++  L+     
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G    A +L+  M   GF PN V Y++LIHG   +G M EA S+  +M E    P+V T
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT 367

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ +IDG  K+GN   A++ +  M+  GC PNVV YT +++ L +      A  +++ M 
Sbjct: 368 HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD--------- 418
              C P++VT+   + G C  GR+D A +LLD++ +    PN+  Y+ L+          
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487

Query: 419 ---------------------------GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
                                      GL +  R+ EA  +   +   G + +  TYN +
Sbjct: 488 NTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNIL 547

Query: 452 LHGVCRA--GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           ++G+CR+    V  AF LL  + + G   DA+T+  +    CK G+V+ A+++L+     
Sbjct: 548 INGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G WN D+++YT+L  G+C  G +  A    Q+M+ +G  P+ A +  ++  L
Sbjct: 608 G-WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 267/577 (46%), Gaps = 48/577 (8%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK-IYNHILDALLAENRFSMINPIYSN 90
            F+ +++   + G+ E+A ++F+ +   G  P  + ++  ++  LL   R      ++  
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M++ G  P+   YN ++  L K      A K+L  M  K C P  V+Y  +V+S+CK G 
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +E A EL     A  F     +Y +LI+G  K  +++EA  L  EMV+ G  P+VIT++ 
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC  GN E +     +M   GC PN+ ++T++++G    GR   A  +   MI  G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA--------- 316
             P+ V Y  L+ G C  G +DEA  +  ++++ S  PN+  YS+L+ G           
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490

Query: 317 ---------------------------KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
                                      K G L  A +I+ RM+S GC P+   Y  ++  
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 350 LCQN--NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           LC++  N   +A +L+  +      P+ VT+     GLC  G VD A+K+L++       
Sbjct: 551 LCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            ++  Y  L  GL    +V  A  L  E+ + G   +   Y  I++G+ +   + +A + 
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKF 670

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M+ +G K    T+  ++ A C  G V+ A    + +   GE    ++ Y +L+ G C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFC 730

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFAT----WNVLVRS 560
            +  +  A    + M++ G  P   T    ++ LVRS
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRS 767



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/572 (25%), Positives = 272/572 (47%), Gaps = 14/572 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +   +   + +  QM+  G       + ++I+   + G A++ALK+   +    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT   Y  ++++L           ++  M   G  PN   Y  L+    K+ R+  A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGL 175
            L  EM   G  PD +++T ++  +CK G  E+A    E  MR G    V  Y  +I GL
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++  AF ++  M+  G  P+ +TY  ++   C +G ++ +  +L ++     +PN+
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470

Query: 236 HSFTSLLKGYLLGGRTHEA-SDLW--NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
             ++SL+KG   GG       DL+  ++   E   P +    ++I GLC  G +DEA  +
Sbjct: 471 QLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDEACRI 528

Query: 293 SYQMEENSCPPNVTTYSALIDGF--AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
             +M    C P+ TTY+ LI+G   ++   +  A  + + +   G  P+ V YT +   L
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGL 588

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+     +A  ++E+ +      + V +     GLC  G+VD A+ L  +M +    P+ 
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             Y  +++GL++  ++++A +   E+   G +  + TY  ++  +C AG V EAF     
Sbjct: 649 AAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEG 708

Query: 471 MLIEGTKLDAI-TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           ML  G  + ++  ++ +I+ +CK  KV+ A++L + +   G   P  ++  SL  G+  S
Sbjct: 709 MLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV-PTAVTSASLFDGLVRS 767

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G  ++A   LQ+M   G  P+ AT+  ++  L
Sbjct: 768 GKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 254/542 (46%), Gaps = 18/542 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +         +L  M  +    +E  +  ++NS  + G  E+A ++F  +   G
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P   IY  ++       R      ++  M   G  P+V T+ +++  LCK+   + A 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-------FGSGVSVYNALIN 173
           K   EM   GC P+ V+YTTI+  + K+G+V  A  + M+       F   V+ Y  L++
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRI-MKGMIAHGCFPDSVT-YICLLD 443

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL---GQMFVRG 230
           G CK  +++EA  LL E+      PN+  YS+++  LCD G+VE +L  L    +     
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAEN 503

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN--GSMDE 288
            +P +    S++ G    GR  EA  ++ RM+ EG  P+   Y+ LI+GLC +    ++ 
Sbjct: 504 LDPGL--CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVER 561

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A ++ + +E     P+  TY+ L  G  K G +  A ++     S G + +VVAYT +  
Sbjct: 562 AFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCT 621

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC      +A SL ++M  +   P+   +   I GL    +++ A K  D+M      P
Sbjct: 622 GLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKP 681

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRAGMVVEAFQL 467
            + TY  L+  L     V EAF     +   G +  +++ Y+ ++HG C+A  V  A +L
Sbjct: 682 TVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKL 741

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+  G    A+T   +     + GK   A +LL  +  GG   P   ++T++L G+ 
Sbjct: 742 FEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGS-PPHAATFTAILDGLR 800

Query: 528 NS 529
            S
Sbjct: 801 KS 802



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 236/514 (45%), Gaps = 13/514 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +   ++  + L + M   G   +  ++ S+I+ + + G  ++A  +F  + E G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  +  ++D L     F      +  M R G +PNV TY  +++ L K  RV  A+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           +++  M   GC PD+V+Y  ++   CKLG+++EA +L            + +Y++L+ GL
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL 480

Query: 176 CKEHKIEEAFWLLCEM---VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           C    +E     L E        +DP +    +II  LC  G ++ +  I  +M   GC 
Sbjct: 481 CDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 233 PNIHSFTSLLKGYLLG--GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           P+  ++  L+ G       R   A  L + +   G+LP+ V Y+ L  GLC  G +D AV
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  +        +V  Y+AL  G    G +  A  ++  M+  G +P+  AY C++  L
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPN 409
            +      A    ++M  +   P   T+   ++ LC  G VD A    + M  + E + +
Sbjct: 659 IKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGS 718

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +  Y+ L+ G  +  +V  A +L  ++   G     VT  ++  G+ R+G   +A +LL 
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +M   G+   A TF  I+    K  +    ++L+
Sbjct: 779 EMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 152/519 (29%), Positives = 275/519 (52%), Gaps = 6/519 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  + +    P++  +N +L A+   N+F ++  +   M+   +  ++++YNIL
Sbjct: 46  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 105

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           +   C+ +++  A  +L +M   G  PD V+ +++++  C   ++ EA  L      M +
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 +N LI+GL   +K  EA  L+  MV RG  P++ TY T+++ LC  G+++ +L 
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M       ++  +T+++         ++A +L+  M  +G  PNVV Y++LI  LC
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           + G   +A  +   M E    PNV T+SALID F K G L+ A ++++ MI     P++ 
Sbjct: 286 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 345

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++   C ++   +A  + E M  ++C PN VT+NT IKG C   RV+  M+L  +M
Sbjct: 346 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 405

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            Q   + N  TYN L+ GL +      A ++  ++   G+  +I+TY+ +L G+C+ G +
Sbjct: 406 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 465

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  +   +     + D  T+NI+I   CK GKV +   L   +   G   P++I YT+
Sbjct: 466 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTT 524

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++ G C  G  +EA    ++M  +G  PN  T+N L+R+
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 266/507 (52%), Gaps = 7/507 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R      AL +  ++ + G +P +   + +L+      R S    +   M    
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +PN  T+N L+  L  +N+   A  L+  M  +GC PD  +Y T+V+ +CK G ++ A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 156 ELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L  +   G     V +Y  +I+ LC    + +A  L  EM ++GI PNV+TY+++I  L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C+ G    +  +L  M  R  NPN+ +F++L+  ++  G+  EA  L++ MI+    P++
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             YS+LI+G C +  +DEA  +   M    C PNV TY+ LI GF KA  +    +++  
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G   N V Y  +++ L Q      A  + +KM  +  PP+ +T++  + GLC  G+
Sbjct: 405 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 464

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+ + + +++ +  P+I TYN +++G+ +  +V++ ++L   +   G++ N++ Y T
Sbjct: 465 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 524

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G CR G+  EA  L  +M  +GT  ++ T+N +I A  + G    + +L+  +R  G
Sbjct: 525 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 584

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFI 537
                  S  S++  + + G ++++++
Sbjct: 585 FVGD--ASTISMVINMLHDGRLEKSYL 609



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 214/442 (48%), Gaps = 5/442 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM V     +   F ++I+       A +A+ +  R+   G +P +  Y  +++ L 
Sbjct: 156 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 215

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +E +V  Y  ++ ALC    V+ A  L  EM NKG  P+ V
Sbjct: 216 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 275

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 276 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 335

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++ +L+KG+    R 
Sbjct: 336 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 395

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLI GL   G  D A  +  +M  +  PP++ TYS L
Sbjct: 396 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 455

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 456 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 515

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN + + T I G C  G  + A  L  +MK+   LPN  TYN L+   LR      + E
Sbjct: 516 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 575

Query: 432 LVTEIEKCGIQLNIVTYNTILH 453
           L+ E+  CG   +  T + +++
Sbjct: 576 LIKEMRSCGFVGDASTISMVIN 597



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 217/414 (52%), Gaps = 6/414 (1%)

Query: 148 LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            G++ ++R L       +  +N L++ + K +K +    L   M +  I  ++ +Y+ +I
Sbjct: 52  FGEMVQSRPLP-----SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 106

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C    +  +L +LG+M   G  P+I + +SLL GY  G R  EA  L ++M    + 
Sbjct: 107 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 166

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN V ++TLIHGL  +    EAV++  +M    C P++ TY  +++G  K G++  A  +
Sbjct: 167 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 226

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
             +M       +VV YT ++  LC     + A +L  +M  +   PN VT+N+ I+ LC 
Sbjct: 227 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 286

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GR   A +LL  M + +  PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I T
Sbjct: 287 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 346

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y+++++G C    + EA  +   M+ +    + +T+N +I  +CK  +V   ++L   + 
Sbjct: 347 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 406

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G    + ++Y +L+ G+  +G    A    +KM+++G+ P+  T+++L+  L
Sbjct: 407 QRGLVG-NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 193/383 (50%), Gaps = 1/383 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K+++A  L  EMV     P+++ ++ ++S++  +   +  + +  +M     + +++S+ 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+  +    +   A  +  +M++ G+ P++V  S+L++G C    + EAV++  QM   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PN  T++ LI G         A  + +RM++ GC P++  Y  +V  LC+      A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL++KM       + V + T I  LC    V+ A+ L  +M      PN+ TYN L+  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L    R  +A  L++++ +  I  N+VT++ ++    + G +VEA +L  +M+      D
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T++ +I  +C   +++ A  + + +    +  P++++Y +L+ G C +  ++E     
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402

Query: 540 QKMLNEGICPNFATWNVLVRSLF 562
           ++M   G+  N  T+N L++ LF
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLF 425



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 180/358 (50%), Gaps = 13/358 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+  +   + S+I      G    A ++   + E  + P V  ++ ++DA +
Sbjct: 261 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 320

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      +Y  M +  ++P++FTY+ L+   C ++R+D A  +   M +K C P+ V
Sbjct: 321 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 380

Query: 137 SYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CK  +VEE     RE++ R   G +V YN LI GL +    + A  +  +M
Sbjct: 381 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 440

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G+ P++ITYS ++  LC  G +E +L +   +      P+I+++  +++G    G+ 
Sbjct: 441 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKV 500

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +  DL+  +  +G  PNV+ Y+T+I G C  G  +EA ++  +M+E+   PN  TY+ L
Sbjct: 501 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 560

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           I    + G+   ++++   M S G   +    + ++      NM H     +EK   E
Sbjct: 561 IRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI------NMLHDGR--LEKSYLE 610



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 179/367 (48%), Gaps = 5/367 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L ++ +ID    LL++M+   +     ++ ++I++         AL +F  +   G++P 
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 273

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN ++  L    R+S  + + S+M    + PNV T++ L+ A  K  ++  A KL  
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
           EM  +   PD  +Y+++++  C   +++EA+ +     S      V  YN LI G CK  
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++EE   L  EM  RG+  N +TY+T+I  L   G+ + +  I  +M   G  P+I +++
Sbjct: 394 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 453

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            LL G    G+  +A  ++  + +    P++  Y+ +I G+C  G +++   +   +   
Sbjct: 454 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 513

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PNV  Y+ +I GF + G    A  ++  M  +G  PN   Y  +++   ++     +
Sbjct: 514 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 573

Query: 360 HSLIEKM 366
             LI++M
Sbjct: 574 AELIKEM 580



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 36/354 (10%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L +  LL  +  +A DL+  M++   LP++V ++ L+  +      D  +S+  +M+   
Sbjct: 35  LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 94

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ +Y+ LI+ F +   L  A  +  +M+  G  P++V  + ++   C      +A 
Sbjct: 95  ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 154

Query: 361 SLIEKMAFENCPPNTVTFNTFIK-----------------------------------GL 385
           +L+++M      PNTVTFNT I                                    GL
Sbjct: 155 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 214

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G +D A+ LL +M++ +   ++  Y  ++D L     V +A  L TE++  GI+ N+
Sbjct: 215 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 274

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYN+++  +C  G   +A +LL  M+      + +TF+ +I A+ K+GK+  A +L D 
Sbjct: 275 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           +      +PDI +Y+SL+ G C    + EA    + M+++   PN  T+N L++
Sbjct: 335 MIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 387



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 36/190 (18%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++D A+ L  +M Q   LP+I  +N+LL  + ++N+    F+LV  + +    L I    
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNK----FDLVISLGERMQNLRI---- 95

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
                                        D  ++NI+I  +C++ ++  A+ +L ++   
Sbjct: 96  ---------------------------SYDLYSYNILINCFCRRSQLPLALAVLGKMMKL 128

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++ +SLL G C+   + EA   + +M      PN  T+N L+  LF +     
Sbjct: 129 G-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 187

Query: 570 PVYILDDIMA 579
            V ++D ++A
Sbjct: 188 AVALIDRMVA 197


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 166/525 (31%), Positives = 271/525 (51%), Gaps = 13/525 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R  LAE A ++  R    G  P V +   ++  L    R S    +    +  G   +VF
Sbjct: 48  RDDLAEAA-RLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVF 106

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE----- 156
            YN L+   C+  R+D A +L+  M      PDA +YT ++  +C  G+V +A       
Sbjct: 107 AYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDM 163

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L       V  Y  L+  +CK     +A  +L EM  +G  PN++TY+ II+ +C    V
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  IL ++   G  P+  S+T++LKG     R  +   L+  M+    +PN V +  L
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +   C  G ++ A+ V  +M E+ C  N T  + +I+   K G +  A +  N M S GC
Sbjct: 284 VRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGC 343

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           SP+ ++YT ++K LC+   +  A  L+ +M  +NCPPN VTFNTFI  LC  G +D A+ 
Sbjct: 344 SPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAIL 403

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L++QM +Y C   I TYN L++G     RV  A EL   +     + N +TY T+L G+C
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLC 460

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            A  +  A +LL +M+     L+ +TFN+++  +C++G V  AI+L+ ++   G   P++
Sbjct: 461 HAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHG-CTPNL 519

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I++ +LL GI      +EA   L  ++++GI  +  T++ +V  L
Sbjct: 520 ITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVL 564



 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 162/543 (29%), Positives = 275/543 (50%), Gaps = 12/543 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D  + L+  M V   + +    I  +    RVG A   L    R RE   +P+V  Y 
Sbjct: 120 RLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR-RE--CQPSVVTYT 176

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+A+   + F     +   M+  G  PN+ TYN+++  +C+ +RVD A ++L  + + 
Sbjct: 177 VLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSY 236

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEA 184
           G  PD VSYTT++  +C   + E+   L         V     ++ L+   C+   +E A
Sbjct: 237 GFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERA 296

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L  M + G   N    + +I+S+C  G V+ +   L  M   GC+P+  S+T++LKG
Sbjct: 297 IEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKG 356

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  +A +L N M+R+   PN V ++T I  LC  G +D+A+ +  QM E  C   
Sbjct: 357 LCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVG 416

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+AL++GF   G +  A +++N +    C PN + YT ++  LC       A  L+ 
Sbjct: 417 IVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLA 473

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M   +CP N VTFN  +   C  G V+ A++L+ QM ++ C PN+ T+N LLDG+    
Sbjct: 474 EMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDC 533

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             +EA EL+  +   GI L+ +TY++I+  + R   + EA Q+   +   G +  A+ +N
Sbjct: 534 NSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYN 593

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            I+ A CK+ + + AI     +       P+  +Y  L+ G+   G ++EA   L ++ +
Sbjct: 594 KILSALCKRCETDRAIDFFAHMVSNS-CMPNESTYVILIEGLAREGLLKEARYVLSELCS 652

Query: 545 EGI 547
            G+
Sbjct: 653 RGV 655



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 273/566 (48%), Gaps = 12/566 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +        +L+  +  G       + +++  Y R G  + A ++   I    
Sbjct: 76  LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRL---IASMP 132

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  ++  L    R      +  +M R   +P+V TY +LL+A+CK++    A 
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           K+L EM  KGC P+ V+Y  I++ +C+  +V++AR++  R     F      Y  ++ GL
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + E+   L CEMV+    PN +T+  ++   C  G VE ++ +L +M   GC  N 
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                ++      GR  +A +  N M   G  P+ ++Y+T++ GLC  G  ++A  +  +
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M   +CPPN  T++  I    + G +  A  +  +M   GCS  +V Y  +V   C    
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR 432

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   +    C PNT+T+ T + GLC   R+D A +LL +M Q +C  N+ T+N 
Sbjct: 433 VDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+    +   V+EA ELV ++ + G   N++T+NT+L G+       EA +LL  ++ +G
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
             LD IT++ I+    ++ ++  A+Q+   ++  G   P  + Y  +L  +C       A
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG-MRPKAVMYNKILSALCKRCETDRA 608

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
             +   M++    PN +T+ +L+  L
Sbjct: 609 IDFFAHMVSNSCMPNESTYVILIEGL 634



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 153/354 (43%), Gaps = 72/354 (20%)

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S+ +  L +   + EA  +  +       P+V   + LI    + G    A+++      
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G   +V AY  +V   C+      A  LI  M     PP+  T+   I+GLC  GRV  
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGLCDRGRVGD 155

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ LLD M + EC P++ TY  LL+ + + +   +A +++ E+   G   NIVTYN I++
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIIN 215

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDA--------------------------------- 480
           G+CR   V +A Q+L ++   G + D                                  
Sbjct: 216 GMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVP 275

Query: 481 --ITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-------------------------EW- 512
             +TF++++  +C+ G V  AI++LDR+   G                         E+ 
Sbjct: 276 NEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335

Query: 513 --------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
                   +PD ISYT++L G+C +G  ++A   L +M+ +   PN  T+N  +
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFI 389



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 4/164 (2%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L  L+  + + EA  LV      G   ++     ++  +CR G   +A ++L      G 
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            +D   +N ++  YC+ G+++ A +L+          PD  +YT L+ G+C+ G + +A 
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLI----ASMPVPPDAYTYTPLIRGLCDRGRVGDAL 157

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             L  ML     P+  T+ VL+ ++  + G    + +LD++ A 
Sbjct: 158 SLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAK 201



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 66/130 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ + E C  +    LL  +  +G+S     + S+++   R    E+A++MF+ +++ G
Sbjct: 525 LLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG 584

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P   +YN IL AL            +++M  +   PN  TY IL++ L +   +  A 
Sbjct: 585 MRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEAR 644

Query: 121 KLLVEMGNKG 130
            +L E+ ++G
Sbjct: 645 YVLSELCSRG 654


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 164/570 (28%), Positives = 286/570 (50%), Gaps = 22/570 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L ++M++  + C+   F  +I  +        AL  F +I + G  P++  ++ +
Sbjct: 93  DVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTL 152

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S     +  +     +PNV  +  L+  LC+  RV  A  LL  M   G 
Sbjct: 153 LHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGL 208

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL------AMRFGSGVSVYNALINGLCKEHKIEEAF 185
            P+ ++Y TIV  +CK+G    A  L        R    V +Y+A+I+GL K+ +  +A 
Sbjct: 209 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQ 268

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI PN+ TY+ +I+  C  G    +  +L +MF R  +P++ +F+ L+   
Sbjct: 269 NLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINAL 328

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA +L+N M+  G +PN + Y+++I G      +D A  + Y M    C P+V
Sbjct: 329 VKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDV 388

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T+S LIDG+  A  +    ++ + M   G   N + YT ++   CQ    + A  L+++
Sbjct: 389 ITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQE 448

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY-----------ECLPNITTYN 414
           M      PN VT NT + GLC  G++  A+++   M++            +  P++ TYN
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYN 508

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   G+  + +TYN+++ G+C+   + EA Q+   M  +
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D +TF  +I  YCK G+V + +++   + G      + I+Y +L+ G C  G +  
Sbjct: 569 GFSPDVVTFTTLINGYCKVGRVGDGLEVFCEM-GRRGIVANAITYRTLIHGFCQVGNING 627

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           A    Q+M++ G+ P+  T   ++  L+S 
Sbjct: 628 ALDIFQEMISSGVYPDTITIRNMLTGLWSK 657



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/537 (29%), Positives = 274/537 (51%), Gaps = 17/537 (3%)

Query: 47  EQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           + A+ +F Y +R   L P V  +  +L  ++   R  ++  ++  M+   +  N++++ I
Sbjct: 58  DDAIDLFGYMVRSRPL-PCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG 164
           L+K  C  +++  A     ++   G  P  V+++T++  +C   +V EA     +     
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN 176

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  +  L+NGLC+E ++ EA  LL  MV+ G+ PN ITY TI+  +C +G+  ++L +L 
Sbjct: 177 VIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 236

Query: 225 QMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
           +M  V    PN+  +++++ G    GR  +A +L++ M  +G  PN+  Y+ +I+G CS+
Sbjct: 237 KMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSS 296

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G   EA  +  +M E    P+V T+S LI+   K G    A +++N M+  G  PN + Y
Sbjct: 297 GRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITY 356

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             M+    + N    A  +   MA + C P+ +TF+  I G CG  RVD  MKLL +M +
Sbjct: 357 NSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSR 416

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              + N  TY  L+ G  ++  +  A +L+ E+   G+  N+VT NT+L G+C  G + +
Sbjct: 417 RGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKD 476

Query: 464 AFQLLGKMLIEGTKLDAI-----------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           A ++   M      LDA            T+NI+I     +GK + A +L + +   G  
Sbjct: 477 ALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG-L 535

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
            PD I+Y S++ G+C    + EA      M ++G  P+  T+  L+   +  +G +G
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLING-YCKVGRVG 591



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 245/499 (49%), Gaps = 42/499 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDAL 75
           LL +M  +G+  ++  + ++++   ++G    AL +  ++ E   +KP V IY+ I+D L
Sbjct: 199 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGL 258

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + R +    ++S M+  G+ PN+FTYN ++   C + R   A +LL EM  +  +PD 
Sbjct: 259 WKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDV 318

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           V+++                               LIN L KE K  EA  L  EM+ RG
Sbjct: 319 VTFS------------------------------VLINALVKEGKFFEAEELYNEMLPRG 348

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I PN ITY+++I        ++ +  +   M  +GC+P++ +F+ L+ GY    R  +  
Sbjct: 349 IIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGM 408

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L + M R G + N + Y+TLIHG C  G+++ A+ +  +M  +   PNV T + L+DG 
Sbjct: 409 KLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGL 468

Query: 316 AKAGNLLGASQIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              G L  A +++  M             N   P+V  Y  ++  L     F +A  L E
Sbjct: 469 CNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYE 528

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+T+T+N+ I GLC   R+D A ++ D M      P++ T+  L++G  +V 
Sbjct: 529 EMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVG 588

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           RV +  E+  E+ + GI  N +TY T++HG C+ G +  A  +  +M+  G   D IT  
Sbjct: 589 RVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIR 648

Query: 485 IIIYAYCKQGKVNNAIQLL 503
            ++     + ++  A+Q L
Sbjct: 649 NMLTGLWSKEELKRAVQCL 667



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 132/306 (43%), Gaps = 16/306 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+   ++  +D  + +   M  +G S     F  +I+ Y      +  +K+ + +   G
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRG 418

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      Y  ++         +    +   M   G+ PNV T N LL  LC N ++  A 
Sbjct: 419 LVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDAL 478

Query: 121 KLLVEMGNK-----------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SG 164
           ++   M                 PD  +Y  ++  +   G+  EA EL            
Sbjct: 479 EMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPD 538

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN++I+GLCK+ +++EA  +   M  +G  P+V+T++T+I+  C VG V   L +  
Sbjct: 539 TITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFC 598

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RG   N  ++ +L+ G+   G  + A D++  MI  G  P+ +    ++ GL S  
Sbjct: 599 EMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 658

Query: 285 SMDEAV 290
            +  AV
Sbjct: 659 ELKRAV 664


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 171/521 (32%), Positives = 278/521 (53%), Gaps = 6/521 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++G + L +QM   G+  S   F ++IN   + G   +A  +  +I ++ L P V  Y  
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++          +   ++  M ++G +PN  TY+ L+  LC   RVD A  +L EM  KG
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG 298

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
             P   +YT  ++++C +   EEA EL  R         V  Y ALI+GL +  K+E A 
Sbjct: 299 IEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAI 358

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  +M+  G+ PN +TY+ +I+ LC  G   T+L I   M   G   N  ++  ++KG 
Sbjct: 359 GLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGL 418

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            LGG   +A  L+ +M++ G LP VV Y+TLI+G  + G+++ A  +   M+EN C P+ 
Sbjct: 419 CLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ L+ GF+K G L  AS  +  M+  G +PN V+YT ++    ++     A SL+++
Sbjct: 479 WTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M    C PN  ++N  I GL    R   A K+ D+M +   LPN+ TY  L+DGL R  R
Sbjct: 539 MEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGR 598

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            + AF++  ++EK     N+ TY+++++G+C+ G   EA  LL +M  +G   D +TF  
Sbjct: 599 TQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTS 658

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +I  +   G++++A  LL R+   G   P+  +Y+ LL G+
Sbjct: 659 LIDGFVVLGRIDHAFLLLRRMVDMG-CKPNYRTYSVLLKGL 698



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 282/525 (53%), Gaps = 6/525 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           +  + E A  ++ ++   G++P++  +N +++ L  + +      I S + +  + P+VF
Sbjct: 175 KFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVF 234

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TY  L+   C+N  +D A+ +   M  +GC P++V+Y+T+++ +C  G+V+EA ++    
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y   I  LC     EEA  L+  M  RG  PNV TY+ +IS L  +G +
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E ++G+  +M   G  PN  ++ +L+    +GGR   A  +++ M   G L N   Y+ +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLC  G +++A+ +  +M +    P V TY+ LI+G+   GN+  A+++ + M  NGC
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGC 474

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+   Y  +V    +      A    ++M      PN V++   I G    G+VD A+ 
Sbjct: 475 EPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALS 534

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +M++  C PN+ +YN +++GL + NR  EA ++  ++ + G+  N++TY T++ G+C
Sbjct: 535 LLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLC 594

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           R G    AF++   M       +  T++ +IY  C++GK + A  LL  +   G   PD 
Sbjct: 595 RNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG-LAPDE 653

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +++TSL+ G    G +  AF+ L++M++ G  PN+ T++VL++ L
Sbjct: 654 VTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 233/452 (51%), Gaps = 5/452 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +M  EG   +   + ++IN     G  ++AL M   + E G++PTV  Y   + AL 
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           A         + + MK+ G  PNV TY  L+  L +  +++ A  L  +M  +G  P+ V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +C  G+   A ++     G G       YN +I GLC    IE+A  L  +M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +  G  P V+TY+T+I+     GNV  +  +L  M   GC P+  ++  L+ G+   G+ 
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             AS  +  M+  G  PN V+Y+ LI G   +G +D A+S+  +MEE  C PNV +Y+A+
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G +K      A +I ++M+  G  PNV+ YT ++  LC+N     A  +   M    C
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+++ I GLC  G+ D A  LL +M++    P+  T+  L+DG + + R+  AF 
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 674

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
           L+  +   G + N  TY+ +L G+ +  +++E
Sbjct: 675 LLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 258/525 (49%), Gaps = 22/525 (4%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
            E  ++ FY I +   +P    Y H ++  +     SM+N     + RD +        I
Sbjct: 88  TESVIQFFYWISK---RP---FYKHNMNCFI-----SMLN----RLVRDRVFAPADHIRI 132

Query: 106 LLKALCKNNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGS 163
           L+   C+N   +      L E+   G      S  T++  + K   VE AR L  +   S
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192

Query: 164 GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G+      +N LIN L K+ K+ EA  +L ++    + P+V TY+++I   C   N++ +
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
            G+  +M   GC+PN  ++++L+ G    GR  EA D+   MI +G  P V  Y+  I  
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITA 312

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC+    +EA+ +  +M++  C PNV TY+ALI G ++ G L  A  ++++M+  G  PN
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            V Y  ++  LC    F  A  +   M       NT T+N  IKGLC  G ++ AM L +
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M +   LP + TYN L++G L    V  A  L+  +++ G + +  TYN ++ G  + G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A     +M+  G   + +++  +I  + K GKV+ A+ LL R+   G  NP++ SY
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG-CNPNVESY 551

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +++ G+       EA     KM+ +G+ PN  T+  L+  L  N
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRN 596


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  278 bits (711), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 165/573 (28%), Positives = 295/573 (51%), Gaps = 26/573 (4%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR-FSMINPI 87
           +  VF  V+ SY R+ L ++AL + +  +  G  P V  YN +LDA +   R  S    +
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           +  M +  + PNVFTYNIL++  C    +D A +    M  KGC P+ V+Y T++   CK
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252

Query: 148 LGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
           L ++++     R +A++     +  YN +INGLC+E +++E  ++L EM  RG   + +T
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+T+I   C  GN   +L +  +M   G +P++ ++TSL+      G  + A++  ++M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             G  PN   Y+TL+ G    G M+EA  V  +M +N   P+V TY+ALI+G   AG ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  +   M   G +P+VV+Y+ ++   C++    +A  +  KM  +   P+T+T+++ I
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           +G C   R   A  L D+M +    P+  TY  L++       +++A +L  E+ + G+ 
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI---------------II 487
            ++VTY+ +++G+ +     EA +LL K+  E +    +T++                +I
Sbjct: 553 PDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             +C +G +  A Q+ + +       PD  +Y  ++ G C  G +++A+   ++M+  G 
Sbjct: 613 KGFCMKGMMTEADQVFESMLEKNH-KPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG- 670

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              F    V V +L   L   G V  L+ ++AN
Sbjct: 671 ---FLLHTVTVIALVKTLHKEGKVNELNSVIAN 700



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 253/519 (48%), Gaps = 47/519 (9%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K  I   + + ++M    VS +   +  +I  +   G  + AL+ F R+ + G  P V  
Sbjct: 183 KRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++D      +      +  +M   G+EPN+ +YN+++  LC+  R+     +L EM 
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
            +G + D V+Y T+                              I G CKE    +A  +
Sbjct: 303 KRGYSLDEVTYNTL------------------------------IKGYCKEGNFHQALVM 332

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM+  G+ P+VITY+++I S+C  GN+  +   L QM VRG  PN  ++T+L+ G+  
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G  +EA  +   MI  GF P+VV Y+ LI+G C  G M +A++V   M+E    P+V +
Sbjct: 393 KGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           YS ++ GF ++ ++  A ++  +M++ G  P+ + Y+ +++  C+     +A  L ++M 
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
               PP+  T+   I   C  G +  A++L ++M +   LP++ TY+ L++GL +  R +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTR 572

Query: 428 EAFELV----------------TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           EA  L+                T IE C   +   +  +++ G C  GM+ EA Q+   M
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCS-NIEFKSVVSLIKGFCMKGMMTEADQVFESM 631

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           L +  K D   +N++I+ +C+ G +  A  L   +   G
Sbjct: 632 LEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 162/325 (49%), Gaps = 20/325 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L QM+V G+  +E  + ++++ + + G   +A ++   + + G  P+V  YN +++   
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHC 426

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +  +MK  G+ P+V +Y+ +L   C++  VD A ++  +M  KG  PD +
Sbjct: 427 IAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTI 486

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++   C+  + +EA +L    +R G       Y ALIN  C E  +++A  L  EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM 546

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF--------------VRGC-NPNIH 236
           V++G+ P+V+TYS +I+ L        +  +L ++F              +  C N    
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S  SL+KG+ + G   EA  ++  M+ +   P+  AY+ +IHG C  G + +A S+  +M
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEM 666

Query: 297 EENSCPPNVTTYSALIDGFAKAGNL 321
            ++    +  T  AL+    K G +
Sbjct: 667 VKSGFLLHTVTVIALVKTLHKEGKV 691



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 76/287 (26%)

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR- 425
            ++ C   +  F+  +K       +D A+ ++   + +  +P + +YN +LD  +R  R 
Sbjct: 126 TYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRN 185

Query: 426 -------VKE----------------------------AFELVTEIEKCGIQLNIVTYNT 450
                   KE                            A      +EK G   N+VTYNT
Sbjct: 186 ISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNT 245

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTK--------------------------------- 477
           ++ G C+   + + F+LL  M ++G +                                 
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305

Query: 478 --LDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             LD +T+N +I  YCK+G  + A+ +  + +R G   +P +I+YTSL+  +C +G M  
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG--LSPSVITYTSLIHSMCKAGNMNR 363

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY-ILDDIMAN 580
           A  +L +M   G+CPN  T+  LV   FS  G++   Y +L +++ N
Sbjct: 364 ATEFLDQMRVRGLCPNERTYTTLVDG-FSQKGYMNEAYRVLKEMIDN 409


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 167/536 (31%), Positives = 280/536 (52%), Gaps = 23/536 (4%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFS----MINPIYSNMKRD---GMEPNV 100
            ALK+F  +       +V+ +N +L A+ +  R S    ++  +++ M R+    + P+ 
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAV-SRARCSSASELVVSLFNRMIRECSIKVAPSS 92

Query: 101 FTYNILLKALCKNNRVD---GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           FTY IL+   C+  R+     A+ L+++ G +    D V ++ ++  +C   +V+EA ++
Sbjct: 93  FTYTILIGCFCRMGRLKHGFAAFGLILKTGWR--VNDTVIFSQLLKGLCDAKRVDEATDI 150

Query: 158 AMR----FGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGI---DPNVITYSTIIS 208
            +R    FG    V  Y+ L+ G C E + EEA  LL  M D G     PNV+TY+T+I 
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            LC    V+ + G+   M  +G  PN H++T L+ GYL  G+  E   +   M   G  P
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +   Y+ L+  LC NG   EA ++   +      PNVT Y  L+ G+A  G+L       
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + M+ NG SP+   +  M     +  M  +A  + +KM  +   PN VT+   I  LC  
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           GRVD A+   +QM      P+I  ++ L+ GL  V++ ++A EL  E+   GI+L+ V +
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           NT++  +CR G V+EA +L+  ML  G + D I++N ++  +C  G+++ A +LLD I  
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS 510

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            G   PD ++Y +LL G C +  + +A+   ++ML +G+ P+  T+N ++  LF  
Sbjct: 511 IG-LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQT 565



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 244/554 (44%), Gaps = 44/554 (7%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG---MEPNVFTYNILLK 108
           +  R+ EFG  P V  Y+ +L     E R      + S M  DG     PNV TY  ++ 
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVID 210

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS----- 163
            LCK   VD A  +   M +KG  P+  +YT ++     +G+ +E  ++     +     
Sbjct: 211 GLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQP 270

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
              +Y  L++ LCK  +  EA  +   ++ +GI PNV  Y  ++      G++      L
Sbjct: 271 DCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFL 330

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M   G +P+ H F  +   Y       EA  ++++M ++   PN+V Y  LI  LC  
Sbjct: 331 DLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKL 390

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA--------------------------- 316
           G +D+AV    QM +    P++  +S+L+ G                             
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450

Query: 317 --------KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
                   + G ++ A ++ + M+  G  P+V++Y  +V   C      +A  L++ +  
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS 510

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+ VT+NT + G C   R+D A  L  +M      P++ TYN +L GL +  R  E
Sbjct: 511 IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A EL   +     Q+NI TYN I++G+C+   V EAF++   +  +  +LD  T NI+I 
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIG 630

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A  K G+  +A+ L   I   G   PD+ +Y  +   +   G ++E       M   G  
Sbjct: 631 ALLKGGRKEDAMDLFATISAYG-LVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTA 689

Query: 549 PNFATWNVLVRSLF 562
           PN    N LVR L 
Sbjct: 690 PNSRMLNALVRWLL 703



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 252/540 (46%), Gaps = 9/540 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + + Q M  +GV  +   +  +I+ Y  +G  ++ ++M   +   G
Sbjct: 208 VIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHG 267

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P   IY  +LD L    R +    I+ ++ R G++PNV  Y ILL        +   +
Sbjct: 268 LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMH 327

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
             L  M   G +PD   +  +  +  K   ++EA  +       R    +  Y ALI+ L
Sbjct: 328 SFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDAL 387

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A     +M+D G+ P++  +S+++  LC V   E +  +  ++  +G   + 
Sbjct: 388 CKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDT 447

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F +L+      GR  EA  L + M+R G  P+V++Y+TL+ G C  G +DEA  +   
Sbjct: 448 VFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDV 507

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+  TY+ L+ G+ KA  +  A  ++  M+  G +P+VV Y  ++  L Q   
Sbjct: 508 IVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 567

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A  L   M       N  T+N  I GLC    VD A K+   +   +   +I T N 
Sbjct: 568 FSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANI 627

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++  LL+  R ++A +L   I   G+  ++ TY  I   + + G + E  +L   M   G
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENG 687

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI-ISYTSLLWGICNSGGMQE 534
           T  ++   N ++     +G +N A   L ++    E N  +  S TS+L  I + G  Q+
Sbjct: 688 TAPNSRMLNALVRWLLHRGDINRAGAYLSKL---DEKNFSLEASTTSMLISIYSRGEYQQ 744



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 172/373 (46%), Gaps = 5/373 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D       QM  EG++    VF S++     V   E+A ++F+ + + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++     +N ++  L  E R      +   M R G+ P+V +YN L+   C   R+D A 
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KLL  + + G  PD V+Y T++   CK  ++++A    RE+ M+     V  YN +++GL
Sbjct: 503 KLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGL 562

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  +  EA  L   M++     N+ TY+ II+ LC    V+ +  +   +  +    +I
Sbjct: 563 FQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDI 622

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +   ++   L GGR  +A DL+  +   G +P+V  Y  +   L   GS++E   +   
Sbjct: 623 FTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSA 682

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEEN   PN    +AL+      G++  A    +++     S      + ++ +  +   
Sbjct: 683 MEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEY 742

Query: 356 FHQAHSLIEKMAF 368
              A SL EK  F
Sbjct: 743 QQLAKSLPEKYHF 755



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 107/220 (48%), Gaps = 14/220 (6%)

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFI----KGLCGCGRVDWAMKLLDQMKQYEC----L 407
            + A  L ++M     P +   FN  +    +  C     +  + L ++M + EC     
Sbjct: 32  LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSAS-ELVVSLFNRMIR-ECSIKVA 89

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN-IVTYNTILHGVCRAGMVVEAFQ 466
           P+  TY  L+    R+ R+K  F     I K G ++N  V ++ +L G+C A  V EA  
Sbjct: 90  PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATD 149

Query: 467 LLGKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNPDIISYTSLL 523
           +L + + E G   D  +++I++  +C + +   A++LL  +   G G   P++++YT+++
Sbjct: 150 ILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVI 209

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            G+C +  +  A    Q M+++G+ PN  T+  L+    S
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 169/609 (27%), Positives = 305/609 (50%), Gaps = 48/609 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           MIEKLG   E D ++ +L +M++    S  EGV++S + +Y R G  ++A+ +F R+  +
Sbjct: 46  MIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFY 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +P++  YN I++ L+    F+  + +Y  MK +G+ P+V T+ I +K+ C+  R   A
Sbjct: 106 NCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALING 174
            +LL  M ++GC  +AV Y T++S   +     EA EL    +R G    ++ +N L++ 
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE-------TSLGILGQMF 227
           LCK+  ++E   LL +++  G+ PN+ T++  I  LC  G +E        +   L +M 
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +G  P+  ++ +++ GY   G+  +AS +      +GF+P+   Y +LI G+C +G +D
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+++  +       P++  Y+ LI G ++ G +L A Q+ N M   G SP++  Y  ++
Sbjct: 346 HALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVI 405

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A++L+     +   P+  TFNT I G C   ++D A+ +LD M  +   
Sbjct: 406 NGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ TYN +L+GL +  + ++  E    I + G   NI+TYN ++  +C+A  V EA  L
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR-------------------- 507
           L ++   G   D ++F  +I  +C  G ++ A QL  R+                     
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFS 585

Query: 508 ---------------GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
                          G    +PD  +Y  ++ G C  G +   + +L K +  G  P+  
Sbjct: 586 EKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLT 645

Query: 553 TWNVLVRSL 561
           T+  ++  L
Sbjct: 646 TFGRVINCL 654



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 253/500 (50%), Gaps = 13/500 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G   +  V+ +VI+ +       +A ++F ++   G+ P +  +N ++  L 
Sbjct: 168 LLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-------MGNK 129
            +        + + + ++G+ PN+FT+NI ++ LC+   ++GA   +VE       M NK
Sbjct: 228 KKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNK 287

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS---VYNALINGLCKEHKIEEA 184
           G  PD  +Y TI+    K+G++++A  +    +F   V     Y +LI G+C++  I+ A
Sbjct: 288 GLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHA 347

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  E + +G+ P+++ Y+T+I  L   G V  +L ++  M   G +P+I ++  ++ G
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   +A++L N  I +G+LP++  ++TLI G C    MD A+ +   M  +   P+
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY+++++G  KA       + +  ++  GC PN++ Y  +++ LC+     +A  L+E
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLE 527

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLDGLLRV 423
           ++      P+ V+F T I G C  G +D A +L  +M +QY     + TYN +++     
Sbjct: 528 EIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEK 587

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +  A +L  E+   G   +  TY  ++ G C+ G V   +  L K +  G      TF
Sbjct: 588 LDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTF 647

Query: 484 NIIIYAYCKQGKVNNAIQLL 503
             +I   C Q +V+ A+ ++
Sbjct: 648 GRVINCLCVQHRVHEAVGIV 667



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 244/483 (50%), Gaps = 14/483 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG-NKGCAPDAVSYTTIVSSICKLGQ 150
           K DG +    TY  +++ L  +   D   ++L+EM  N   +     Y + + +  + G+
Sbjct: 32  KEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKGK 91

Query: 151 VEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           V+EA ++  R         +  YNA++N L +     +A  +   M   GI P+V T++ 
Sbjct: 92  VQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTI 151

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            I S C       +L +L  M  +GC  N   + +++ G+       EA +L+N+M+R G
Sbjct: 152 RIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLG 211

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P++  ++ L+H LC  G + E   +  ++ +N   PN+ T++  I G  + G L GA+
Sbjct: 212 IFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGAN 271

Query: 326 Q-------IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                     ++M++ G  P+   Y  ++    +      A  +++   F+   P+  T+
Sbjct: 272 SKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTY 331

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            + I G+C  G +D A+ L ++       P+I  YN L+ GL +   V +A +L+ ++ K
Sbjct: 332 CSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSK 391

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  +I TYN +++G+C+ G V +A  LL   + +G   D  TFN +I  YCK+ K++N
Sbjct: 392 EGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDN 451

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           AI +LD +   G   PD+I+Y S+L G+C +   ++     + ++ +G  PN  T+N+L+
Sbjct: 452 AIGILDSMWSHG-VTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILI 510

Query: 559 RSL 561
            SL
Sbjct: 511 ESL 513



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 186/374 (49%), Gaps = 6/374 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I     +L+  K +G    E  + S+I    + G  + AL +F      GLKP++ +YN
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  +        + ++M ++GM P+++TYN+++  LCK   V  A  LL     K
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK 427

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEA 184
           G  PD  ++ T++   CK  +++ A   L   +  GV+     YN+++NGLCK  K E+ 
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                 ++++G  PN+ITY+ +I SLC    V  +L +L ++  RG  P+  SF +++ G
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVA-YSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           +   G   EA  L+ RM ++  + + VA Y+ +I+       MD A  + ++M +  C P
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDP 607

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY  +IDGF K GN+        + I  G  P++  +  ++  LC  +  H+A  ++
Sbjct: 608 DSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIV 667

Query: 364 EKMAFENCPPNTVT 377
             M      P  V 
Sbjct: 668 HLMVRTGVVPEAVV 681



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 180/374 (48%), Gaps = 8/374 (2%)

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V+ ++ +  +M    C P+I S+ +++   +  G  ++A  ++ RM  EG  P+V  +
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTF 149

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +  I   C       A+ +   M    C  N   Y  +I GF +    + A +++N+M+ 
Sbjct: 150 TIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLR 209

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG---- 389
            G  P++  +  ++ +LC+     +   L+ K+      PN  TFN FI+GLC  G    
Sbjct: 210 LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEG 269

Query: 390 ---RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V  A   L +M      P+  TYN ++ G  +V ++++A  ++ + +  G   +  
Sbjct: 270 ANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY +++ GVC+ G +  A  L  + L +G K   + +N +I    +QG V  A+QL++ +
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G  +PDI +Y  ++ G+C  G + +A   L   + +G  P+  T+N L+      L 
Sbjct: 390 SKEG-MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLK 448

Query: 567 HLGPVYILDDIMAN 580
               + ILD + ++
Sbjct: 449 MDNAIGILDSMWSH 462



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 157/355 (44%), Gaps = 49/355 (13%)

Query: 253 EASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME---ENSCPPNVTTY 308
           +A  ++N + +E GF    + Y  +I  L  +G  D    V  +M    +NS    V  Y
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGV--Y 79

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
            + +  + + G +  A  ++ RM    C P++ +Y  ++ +L +   F+QAH +  +M  
Sbjct: 80  VSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKH 139

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E   P+  TF   IK  C   R   A++LL+ M    C  N   Y  ++ G    N   E
Sbjct: 140 EGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVE 199

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII- 487
           A+EL  ++ + GI  +I T+N ++H +C+ G + E  +LL K+L  G   +  TFNI I 
Sbjct: 200 AYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQ 259

Query: 488 -----------------------------------------YAYCKQGKVNNAIQLLDRI 506
                                                    Y Y K GK+ +A ++L   
Sbjct: 260 GLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDA 319

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  G + PD  +Y SL+ G+C  G +  A    ++ L +G+ P+   +N L++ L
Sbjct: 320 KFKG-FVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGL 373


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  278 bits (710), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 264/502 (52%), Gaps = 41/502 (8%)

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           DG  P+V+    L++ LC+  R   A ++L      G   D  +Y T+V+  C+ G ++ 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 154 AREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           AR L  +M        Y  LI  LC   ++ +A  LL +M+ RG  PNV+TY+ ++ ++C
Sbjct: 130 ARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
                E ++ +L +M  +GC PNI ++  ++ G    GR  +A +L NR+   GF P+ V
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249

Query: 272 AYSTLIHGLCSN-----------------------------------GSMDEAVSVSYQM 296
           +Y+TL+ GLC++                                   G ++ A+ V  QM
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            E+ C  N T  + +I+   K G +  A ++ N M S GC+P+ ++YT ++K LC+   +
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  L+ +M   NCPPN VTFNTFI  LC  G ++ A+ L++QM ++ C   + TYN L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++G      +  A EL   +     + N +TY T+L G+C A  +  A +L+ +ML    
Sbjct: 430 VNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDC 486

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             + +TFN+++  +C++G +  AI+L++++   G   P++I+Y +LL GI      ++A 
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHG-CTPNLITYNTLLDGITKDCSSEDAL 545

Query: 537 IYLQKMLNEGICPNFATWNVLV 558
             L  ++++G+ P+  T++ ++
Sbjct: 546 ELLHGLVSKGVSPDVITFSSII 567



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 165/587 (28%), Positives = 292/587 (49%), Gaps = 47/587 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +        +L+  +  G       + +++  Y R G  + A ++   I    
Sbjct: 82  LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL---IGSMP 138

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  ++  L    R +    +  +M R G +PNV TY +LL+A+C+N+  + A 
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
            +L EM  KGC P+ V+Y  I++ +C+ G+V++AREL  R     F      Y  L+ GL
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITY-------------------------------- 203
           C   + ++   L  EM+++   PN +T+                                
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318

Query: 204 ---STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
              + +I+S+C  G V+ +  +L  M   GCNP+  S+T++LKG     R  +A +L N 
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+R    PN V ++T I  LC  G +++A+ +  QM E+ C   V TY+AL++GF   G+
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A +++  M    C PN + YT ++  LC       A  L+ +M   +CPPN VTFN 
Sbjct: 439 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            +   C  G ++ A++L++QM ++ C PN+ TYN LLDG+ +    ++A EL+  +   G
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  +++T+++I+  + +   + EA QL   +   G +  A+ +N I+   CK+ +++NAI
Sbjct: 556 VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAI 615

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
                +   G   P+  +Y  L+ G+ + G ++EA   L  + + G+
Sbjct: 616 DFFAYMVSNG-CMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 5/152 (3%)

Query: 429 AFELVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           A  LV     C G   ++     ++  +CR G   +A ++L      G+ +D   +N ++
Sbjct: 59  AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 118

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             YC+ G ++ A +L+    G     PD  +YT L+  +C+ G + +A   L  ML  G 
Sbjct: 119 AGYCRYGHLDAARRLI----GSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGC 174

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
            PN  T+ VL+ ++  N G    + +LD++ A
Sbjct: 175 QPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRA 206


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 280/557 (50%), Gaps = 21/557 (3%)

Query: 22  KVEGVSCSEGV---FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           K  G SC  G     + + + +  +   E A+ +F  +      P+V  +  ++  ++  
Sbjct: 33  KASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRM 92

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R  ++  +Y  M+R  +  +++++ IL+K  C  +++  A     ++   G  PD V++
Sbjct: 93  ERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTF 152

Query: 139 TTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T++  +C   +V EA  L  +         V  +  L+NGLC+E +I EA  LL  M++
Sbjct: 153 NTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTH 252
            G+ P  ITY TI+  +C  G+  ++L +L +M  V    PN+  +++++      GR  
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M  +G  P++  Y+++I G CS+G   +A  +  +M E    P+V TY+ALI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    A ++++ M+  G  PN + Y+ M+   C+ N    A  +   MA + C 
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN +TFNT I G CG  R+D  M+LL +M +   + + TTYN L+ G   V  +  A +L
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI----------- 481
           + E+   G+  +IVT +T+L G+C  G + +A ++   M      LDA            
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I     +GK   A +L + +   G   PD I+Y+S++ G+C    + EA      
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDS 571

Query: 542 MLNEGICPNFATWNVLV 558
           M ++   PN  T+  L+
Sbjct: 572 MGSKSFSPNVVTFTTLI 588



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 158/571 (27%), Positives = 281/571 (49%), Gaps = 20/571 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F ++ + GL P V  +N +
Sbjct: 96  DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTL 155

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S    ++  M      PNV T+  L+  LC+  R+  A  LL  M   G 
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAF 185
            P  ++Y TIV  +CK G    A  L  +          V +Y+A+I+ LCK+ +  +A 
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI P++ TY+++I   C  G    +  +L +M  R  +P++ ++ +L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA +L++ M+  G +PN + YS++I G C    +D A  + Y M    C PN+
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   +   Y  ++         + A  L+++
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT +T + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLLWGICNSGGMQ 533
               + +TF  +I  YCK G+V++ ++L   + R G   N   I+Y +L+ G    G + 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA--ITYITLICGFRKVGNIN 633

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            A    Q+M++ G+ P+  T   ++  L+S 
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSK 664



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 243/493 (49%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+PT   Y  I+D +  + +  S +N +   
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   + PNV  Y+ ++ +LCK+ R   A  L  EM  KG  PD  +Y +++   C  G+
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITYS+
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+PN+ +F +L+ GY    R  +  +L + M   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + +   Y+TLIHG    G ++ A+ +  +M  +   P++ T   L+DG    G L  A 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V  Y  ++  L     F +A  L E+M      P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++ D M      PN+ T+  L++G  +  RV +  EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  N +TY T++ G  + G +  A  +  +M+  G   D IT   ++     + 
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L++++
Sbjct: 666 ELKRAVAMLEKLQ 678



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 199/418 (47%), Gaps = 16/418 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +       Q L  +M+ +G+      + S+I  +   G    A ++   + E  
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN +++A + E +F     +Y  M   G+ PN  TY+ ++   CK NR+D A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +   M  KGC+P+ +++ T++   C   ++++  EL          +  + YN LI+G 
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-------- 227
                +  A  LL EM+  G+ P+++T  T++  LCD G ++ +L +   M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 228 ---VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                G  P++ ++  L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC   
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA  +   M   S  PNV T++ LI+G+ KAG +    +++  M   G   N + Y 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            ++    +    + A  + ++M      P+T+T    + GL     +  A+ +L++++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 1/166 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G   +  +++A +L +++ +     ++V +  ++  V R         L  KM  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             + D  +F I+I  +C   K+  A+    ++   G  +PD++++ +LL G+C    + E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLG-LHPDVVTFNTLLHGLCVEDRVSE 167

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           A     +M      PN  T+  L+  L      +  V +LD +M +
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 280/557 (50%), Gaps = 21/557 (3%)

Query: 22  KVEGVSCSEGV---FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           K  G SC  G     + + + +  +   E A+ +F  +      P+V  +  ++  ++  
Sbjct: 33  KASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRM 92

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R  ++  +Y  M+R  +  +++++ IL+K  C  +++  A     ++   G  PD V++
Sbjct: 93  ERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTF 152

Query: 139 TTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T++  +C   +V EA  L  +         V  +  L+NGLC+E +I EA  LL  M++
Sbjct: 153 NTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTH 252
            G+ P  ITY TI+  +C  G+  ++L +L +M  V    PN+  +++++      GR  
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M  +G  P++  Y+++I G CS+G   +A  +  +M E    P+V TY+ALI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    A ++++ M+  G  PN + Y+ M+   C+ N    A  +   MA + C 
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 392

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN +TFNT I G CG  R+D  M+LL +M +   + + TTYN L+ G   V  +  A +L
Sbjct: 393 PNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDL 452

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI----------- 481
           + E+   G+  +IVT +T+L G+C  G + +A ++   M      LDA            
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I     +GK   A +L + +   G   PD I+Y+S++ G+C    + EA      
Sbjct: 513 TYNILISGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDS 571

Query: 542 MLNEGICPNFATWNVLV 558
           M ++   PN  T+  L+
Sbjct: 572 MGSKSFSPNVVTFTTLI 588



 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/571 (27%), Positives = 281/571 (49%), Gaps = 20/571 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F +I + GL P V  +N +
Sbjct: 96  DLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTL 155

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S    ++  M      PNV T+  L+  LC+  R+  A  LL  M   G 
Sbjct: 156 LHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAF 185
            P  ++Y TIV  +CK G    A  L  +          V +Y+A+I+ LCK+ +  +A 
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI P++ TY+++I   C  G    +  +L +M  R  +P++ ++ +L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA +L++ M+  G +PN + YS++I G C    +D A  + Y M    C PN+
Sbjct: 336 VKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNL 395

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   +   Y  ++         + A  L+++
Sbjct: 396 ITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT +T + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLLWGICNSGGMQ 533
               + +TF  +I  YCK G+V++ ++L   + R G   N   I+Y +L+ G    G + 
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANA--ITYITLICGFRKVGNIN 633

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            A    Q+M++ G+ P+  T   ++  L+S 
Sbjct: 634 GALDIFQEMISSGVYPDTITIRNMLTGLWSK 664



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 243/493 (49%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+PT   Y  I+D +  + +  S +N +   
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   + PNV  Y+ ++ +LCK+ R   A  L  EM  KG  PD  +Y +++   C  G+
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITYS+
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSS 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+PN+ +F +L+ GY    R  +  +L + M   G
Sbjct: 366 MIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + +   Y+TLIHG    G ++ A+ +  +M  +   P++ T   L+DG    G L  A 
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V  Y  ++  L     F +A  L E+M      P+
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++ D M      PN+ T+  L++G  +  RV +  EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 605

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  N +TY T++ G  + G +  A  +  +M+  G   D IT   ++     + 
Sbjct: 606 EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 665

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L++++
Sbjct: 666 ELKRAVAMLEKLQ 678



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 199/418 (47%), Gaps = 16/418 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +       Q L  +M+ +G+      + S+I  +   G    A ++   + E  
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN +++A + E +F     +Y  M   G+ PN  TY+ ++   CK NR+D A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +   M  KGC+P+ +++ T++   C   ++++  EL          +  + YN LI+G 
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-------- 227
                +  A  LL EM+  G+ P+++T  T++  LCD G ++ +L +   M         
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500

Query: 228 ---VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                G  P++ ++  L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC   
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA  +   M   S  PNV T++ LI+G+ KAG +    +++  M   G   N + Y 
Sbjct: 561 RLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYI 620

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            ++    +    + A  + ++M      P+T+T    + GL     +  A+ +L++++
Sbjct: 621 TLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 1/166 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G   +  +++A +L +++ +     ++V +  ++  V R         L  KM  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             + D  +F I+I  +C   K+  A+    +I   G  +PD++++ +LL G+C    + E
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLG-LHPDVVTFNTLLHGLCVEDRVSE 167

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           A     +M      PN  T+  L+  L      +  V +LD +M +
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  277 bits (709), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 158/497 (31%), Positives = 265/497 (53%), Gaps = 8/497 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           +R+ G +P V  YN ++D L   N       ++ +MK     P++ TYN LL  L +  +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNAL 171
           ++ A  L  EM ++  + D +S+  +V+ +C+ G++E A    R++  R    V  Y+ L
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVL 119

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+GLCK +++ +A  LL  M  RG  P+VITY+ ++  LC    V  +  +L +M   GC
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN+ ++ SLL G     R  +A  L   M   G  PNVV Y TLI GLC  G + +A +
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   M +    P++  Y+ LI+G  KA  +  +  +  R +S G  P+VV Y+ ++  LC
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 299

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           ++N   +A  L+  +    CPP+ + ++T I GLC  G+VD A  L + M    C  ++ 
Sbjct: 300 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVV 359

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY+ L+DGL +  RV EA  L+  + + G   + +TYN+++ G+C    + EA +L+ +M
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNN-AIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
                   A+T+NI+I+  C+  +V++ A+     +   G   PD I+Y+ LL G+  S 
Sbjct: 420 ERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVI-PDHITYSILLEGLKKSK 478

Query: 531 GMQE-AFIYLQKMLNEG 546
            + E   + L +M+  G
Sbjct: 479 DLHELRHLVLDQMVQLG 495



 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 256/493 (51%), Gaps = 39/493 (7%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M+  G   +   + S+I+   +    ++A ++F  ++     P++  YN +LD L    +
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 81  FSMINPIYSNM--KR-------------------------------DGMEPNVFTYNILL 107
                 ++  M  +R                               D   PNV TY++L+
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG-- 164
             LCK NRV  A +LL  M  +GC+PD ++YT +V  +CK  +V  A E L     +G  
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 165 --VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +  YN+L++GLC+  ++ +A  L+ +M  RG  PNV+TY T+I  LC VG V+ +  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L  M  +G  P++  +  L+ G     +  E+  L  R +  G  P+VV YS++I+GLC 
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           +  +DEA  +   ++   CPP+V  YS LIDG  KAG +  A  ++  M  +GC  +VV 
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y+ ++  LC+     +AH L+ +M     PP+T+T+N+ IKGLC    +D A++L+++M+
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 420

Query: 403 QYECLPNITTYNELLDGLLRVNRVKE-AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +  C P+  TYN L+ G+ R+ RV   A +   E+   G+  + +TY+ +L G+ ++  +
Sbjct: 421 RSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 480

Query: 462 VEAFQLLGKMLIE 474
            E   L+   +++
Sbjct: 481 HELRHLVLDQMVQ 493



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 239/441 (54%), Gaps = 8/441 (1%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHK 180
           M + GC P+ V+Y +++  +CK  + + A+EL     ++     +  YN L++GL +  K
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E A  L  EM+DR    +VI+++ +++ LC  G +ET+L    +M  R C+PN+ +++ 
Sbjct: 61  LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G     R  +A +L   M   G  P+V+ Y+ L+ GLC    +  A  V  +M +  
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C PN+ TY++L+ G  +A  +  A  +   M   GC+PNVV Y  ++  LC+      A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +++  M  +   P+ + +N  I GLC   +VD ++ LL +       P++ TY+ ++ GL
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R NR+ EA  L+  ++  G   +++ Y+T++ G+C+AG V EAF L   M  +G   D 
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ +I   CK G+V+ A  LL R+   G   P  ++Y SL+ G+C+   + EA   ++
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMG-TPPSTMTYNSLIKGLCDLNHLDEAIELVE 417

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           +M      P+  T+N+L+  +
Sbjct: 418 EMERSNCAPSAVTYNILIHGM 438



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 223/404 (55%), Gaps = 4/404 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  YN+LI+GLCK ++ + A  L   M      P+++TY+T++  L   G +E ++ +  
Sbjct: 10  VVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQ 69

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  R  + ++ SF  L+ G    G+   A + + +M  +   PNV+ YS LI GLC   
Sbjct: 70  EMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVLIDGLCKAN 127

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            + +AV +   M+   C P+V TY+ L+DG  K   +  A ++   M+  GC PN+V Y 
Sbjct: 128 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN 187

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC+      A +L+  M    C PN VT+ T I GLC  GRV  A  +L  M   
Sbjct: 188 SLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK 247

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P++  YN L++GL + ++V E+  L+      GI+ ++VTY+++++G+CR+  + EA
Sbjct: 248 GGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEA 307

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +LL  +   G   D I ++ +I   CK GKV+ A  L + + G G  + D+++Y++L+ 
Sbjct: 308 CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG-CDADVVTYSTLID 366

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           G+C +G + EA + L +M+  G  P+  T+N L++ L  +L HL
Sbjct: 367 GLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL-CDLNHL 409



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 207/404 (51%), Gaps = 9/404 (2%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           C    ++  L+  +     CS  V  +  +I+   +     QA+++   ++  G  P V 
Sbjct: 90  CRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVI 149

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  ++D L  E++ +    +   M   G  PN+ TYN LL  LC+  RV  A  L+ +M
Sbjct: 150 TYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM 209

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKI 181
             +GC P+ V+Y T++  +CK+G+V++A   LA     G    + +YN LINGLCK  ++
Sbjct: 210 TCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQV 269

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +E+  LL   V  GI P+V+TYS++I  LC    ++ +  +L  +  RGC P++  +++L
Sbjct: 270 DESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTL 329

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    G+  EA DL+  M  +G   +VV YSTLI GLC  G +DEA  +  +M     
Sbjct: 330 IDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGT 389

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH- 360
           PP+  TY++LI G     +L  A ++   M  + C+P+ V Y  ++  +C+      A  
Sbjct: 390 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAAL 449

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL-LDQMKQ 403
              ++M      P+ +T++  ++GL     +     L LDQM Q
Sbjct: 450 DYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 6/216 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D    LL++    G+      + SVI    R    ++A ++   ++  G
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V +Y+ ++D L    +      +Y  M  DG + +V TY+ L+  LCK  RVD A+
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAH 378

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL  M   G  P  ++Y +++  +C L  ++EA EL               YN LI+G+
Sbjct: 379 LLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 438

Query: 176 CKEHKIEE-AFWLLCEMVDRGIDPNVITYSTIISSL 210
           C+  +++  A     EM+D G+ P+ ITYS ++  L
Sbjct: 439 CRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 170/592 (28%), Positives = 288/592 (48%), Gaps = 66/592 (11%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L+ +KV G         + I+ +R  G  EQA          G +  V  YN +++
Sbjct: 89  VAAVLRSLKVTG---------TAISFFRWAG--EQA----------GFQHDVFTYNCLMN 127

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L+AE  +S    I+  M + G+ PN F++NIL+++  +  R D A      M  K C P
Sbjct: 128 LLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKP 187

Query: 134 DAVSYTTIVSSICKLGQVEEARE-----LAMRF-GSGVSVYNALINGLCKEHKIEEAFWL 187
           D  ++  +V  +CK G  E+A E     +AM F     +++ A++  L K  +++EA  +
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             +M   G  P+ I Y+T+I  L   G+ + +L +L  M  + C P   ++  L+     
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G    A +L+  M   GF PN V Y++LIHG   +G M EA S+  +M E    P+V T
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT 367

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ +IDG  K+GN   A++ +  M+  GC PNVV YT +++ L +      A  +++ M 
Sbjct: 368 HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD--------- 418
              C P++VT+   + G C  GR+D A +LLD++ +    PN+  Y+ L++         
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE 487

Query: 419 ---------------------------GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
                                      GL +  R+ EA  +   +   G + +  TYN +
Sbjct: 488 KTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNIL 547

Query: 452 LHGVCRA--GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           ++G+CR+    V  AF LL  +   G   DA+T+  +    CK G+V+ A+++L+     
Sbjct: 548 INGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSR 607

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G WN D+++YT+L  G+C  G +  A    Q+M+ +G  P+ A +  ++  L
Sbjct: 608 G-WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658



 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 163/610 (26%), Positives = 283/610 (46%), Gaps = 81/610 (13%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK-IYNHILDALLAENRFSMINPIYSN 90
            F+ +++   + G+ E+A ++F+ +   G  P  + ++  ++  LL   R      ++  
Sbjct: 191 TFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQ 250

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M++ G  P+   YN ++  L K      A K+L  M  K C P  V+Y  +V+S+CK G 
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +E A EL     A  F     +Y +LI+G  K  +++EA  L  EMV+ G  P+VIT++ 
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC  GN E +     +M   GC PN+ ++T++++G    GR   A  +   MI  G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA--------- 316
             P+ V Y  L+ G C  G +DEA  +  ++++ S  PN+  YS+L++G           
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490

Query: 317 ---------------------------KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
                                      K G L  A +I+ RM+S GC P+   Y  ++  
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550

Query: 350 LCQN--NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ---- 403
           LC++  N   +A +L+  +      P+ VT+     GLC  G VD A+K+L++       
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWN 610

Query: 404 -----YECL--------------------------PNITTYNELLDGLLRVNRVKEAFEL 432
                Y  L                          P+   Y  +++GL++V ++++A + 
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI-TFNIIIYAYC 491
             E+   G +  + TY  ++  +C AG V EAF     ML  G  + ++  ++ +I+ +C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  KV+ A++L + +   G   P  ++  SL  G+  SG  ++A   LQ+M   G  P+ 
Sbjct: 731 KALKVDAALKLFEDMISRGNV-PTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHA 789

Query: 552 ATWNVLVRSL 561
           AT+  ++  L
Sbjct: 790 ATFTAILDGL 799



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/542 (27%), Positives = 256/542 (47%), Gaps = 18/542 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +         +L  M  +    +E  +  ++NS  + G  E+A ++F  +   G
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P   IY  ++       R      ++  M   G  P+V T+ +++  LCK+   + A 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-------FGSGVSVYNALIN 173
           K   EM   GC P+ V+YTTI+  + K+G+V  A  + M+       F   V+ Y  L++
Sbjct: 386 KSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRI-MKGMIAHGCFPDSVT-YICLLD 443

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL---GQMFVRG 230
           G CK  +++EA  LL E+      PN+  YS++++ LCD G+VE +L  L    +     
Sbjct: 444 GFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAET 503

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN--GSMDE 288
            +P +    S++ G    GR  EA  ++ RM+ EG  P+   Y+ LI+GLC +    ++ 
Sbjct: 504 LDPGL--CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVER 561

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A ++ + +E+    P+  TY+ L  G  K G +  A ++     S G + +VVAYT +  
Sbjct: 562 AFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCT 621

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC      +A SL ++M  +   P+   +   I GL    +++ A K  D+M      P
Sbjct: 622 GLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKP 681

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRAGMVVEAFQL 467
            + TY  L+  L     V EAF     +   G +  +++ Y+ ++HG C+A  V  A +L
Sbjct: 682 TVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKL 741

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+  G    A+T   +     + GK   A +LL  +  GG   P   ++T++L G+ 
Sbjct: 742 FEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGS-PPHAATFTAILDGLR 800

Query: 528 NS 529
            S
Sbjct: 801 KS 802



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 239/514 (46%), Gaps = 13/514 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +   ++  + L + M   G   +  ++ S+I+ + + G  ++A  +F  + E G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  +  ++D L     F      +  M R G +PNV TY  +++ L K  RV  A+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAF 420

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           +++  M   GC PD+V+Y  ++   CKLG+++EA +L            + +Y++L+NGL
Sbjct: 421 RIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGL 480

Query: 176 CKEHKIEEAFWLLCEMVDRG---IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           C    +E+    L E        +DP +    +II  LC  G ++ +  I  +M   GC 
Sbjct: 481 CDGGSVEKTLDDLFEQSKAAAETLDPGLCC--SIIVGLCKTGRLDEACRIFQRMVSEGCK 538

Query: 233 PNIHSFTSLLKGYLLG--GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           P+  ++  L+ G       R   A  L + + + G+LP+ V Y+ L  GLC  G +D AV
Sbjct: 539 PDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAV 598

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  +        +V  Y+AL  G    G +  A  ++  M+  G +P+  AY C++  L
Sbjct: 599 KMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGL 658

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPN 409
            +      A    ++M  +   P   T+   ++ LC  G VD A    + M  + E + +
Sbjct: 659 IKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGS 718

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +  Y+ L+ G  +  +V  A +L  ++   G     VT  ++  G+ R+G   +A +LL 
Sbjct: 719 VMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQ 778

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +M   G+   A TF  I+    K  +    ++L+
Sbjct: 779 EMAAGGSPPHAATFTAILDGLRKSDESGKLLKLV 812


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 172/565 (30%), Positives = 279/565 (49%), Gaps = 62/565 (10%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL---------AEN 79
           S  VF  ++ SY  + + +QA+      +  G  P V  YN +LDA++         AE 
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200

Query: 80  RF-----SMINP-----------------------IYSNMKRDGMEPNVFTYNILLKALC 111
            +     S ++P                        +  M+R+G  PNV TYN L+ A C
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS---- 166
           K  R+D A+ LL  M +KG  P+ +SY  I++ +C+ G ++EA E+    G  G +    
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN L+NG CKE    +A  +  EMV  G+ P+V+TY+ +I+S+C   N+  ++    QM
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
            +RG  PN  ++T+L+ G+   G  +EA  + N M   GF P+VV Y+  IHG C    M
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA+ V  +M E    P+V +YS +I GF + G L  A Q+   M+  G SP+ V Y+ +
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ LC+     +A  L ++M     PP+  T+ T I   C  G ++ A+ L D+M     
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560

Query: 407 LPNITTYNELLDGLLRVNRVKEA----FELVTE------------IEKCG-IQLNIVTYN 449
           LP+  TY+ L++GL +  R +EA    F+L+ E            IE C  I+   V   
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVV-- 618

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G C  G++ EA ++   M+    K     +N+II+ +C+ G +  A  L   +   
Sbjct: 619 ALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHS 678

Query: 510 GEWNPDIISYTSLLWGICNSGGMQE 534
           G + P  ++  +L+  +   G  +E
Sbjct: 679 G-FVPHTVTVITLIKALFKEGMNEE 702



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 244/463 (52%), Gaps = 8/463 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC------KLGQVEEARE 156
           +++++K+    N +D A   +    + G  P  +SY +++ +I       KL   E  RE
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 157 L-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           +   R    V  YN LI G C   ++++      EM   G  PNV+TY+T+I + C +G 
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ + G+L  M  +G  PN+ S+  ++ G    G   EA ++   M  +GF P+ V Y+T
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           L++G C  G+  +A+ +  +M  N   P+V TY+ALI+   KA NL  A + +++M   G
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN   YT ++    +  + ++A+ ++ +M      P+ VT+N FI G C   R++ A+
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            ++ +M +    P++ +Y+ ++ G  R   +  AF++  E+ + G+  + VTY++++ G+
Sbjct: 445 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 504

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C    + EA  L  +ML  G   D  T+  +I AYC +G +N A+ L D +   G + PD
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG-FLPD 563

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            ++Y+ L+ G+      +EA   L K++ E   P+  T++ L+
Sbjct: 564 AVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 606



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 219/406 (53%), Gaps = 9/406 (2%)

Query: 161 FGSGVSVYNALINGLCKEH-----KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           F  GV  YN++++ + +         EE +    EM+   + PNV TY+ +I   C VG 
Sbjct: 173 FMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR---EMIRSRVSPNVYTYNILIRGFCSVGE 229

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++  LG  G+M   GC PN+ ++ +L+  Y   GR  EA  L   M  +G  PN+++Y+ 
Sbjct: 230 LQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 289

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +I+GLC  GSM EA  +  +M      P+  TY+ L++G+ K GN   A  I   M+ NG
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            SP+VV YT ++  +C+    ++A    ++M      PN  T+ T I G    G ++ A 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++L++M +    P++ TYN  + G   + R++EA  +V E+ + G+  ++V+Y+TI+ G 
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CR G +  AFQ+  +M+ +G   DA+T++ +I   C+  ++  A  L   +   G   PD
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG-LPPD 528

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +YT+L+   C  G + +A     +M+++G  P+  T++VL+  L
Sbjct: 529 EFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGL 574



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 236/496 (47%), Gaps = 20/496 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I++Y ++G  ++A  +   +   G++P +  YN I++ L  E        I   M   
Sbjct: 254 TLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK 313

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+  TYN LL   CK      A  +  EM   G +P  V+YT +++S+CK   +  A
Sbjct: 314 GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373

Query: 155 REL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E    MR          Y  LI+G  ++  + EA+ +L EM + G  P+V+TY+  I  
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C +  +E +LG++ +M  +G  P++ S+++++ G+   G    A  +   M+ +G  P+
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            V YS+LI GLC    + EA  +S +M +   PP+  TY+ LI+ +   G+L  A  + +
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT--------- 380
            MI  G  P+ V Y+ ++  L +     +A  L+ K+ +E   P+ VT++T         
Sbjct: 554 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 613

Query: 381 ------FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
                  IKG C  G +  A ++ + M +    P    YN ++ G  R   + +AF L  
Sbjct: 614 FKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK 673

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+   G   + VT  T++  + + GM  E  +++G  L      +A    +++    K+G
Sbjct: 674 EMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEG 733

Query: 495 KVNNAIQLLDRIRGGG 510
            +   + +L  +   G
Sbjct: 734 NMEAVLNVLTDMAKDG 749



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 20/443 (4%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    LL+ M  +G+  +   +  +IN   R G  ++A ++   +   G  P    YN 
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+    E  F     I++ M R+G+ P+V TY  L+ ++CK   ++ A +   +M  +G
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
             P+  +YTT++    + G + EA  +        F   V  YNA I+G C   ++EEA 
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            ++ EMV++G+ P+V++YSTIIS  C  G ++ +  +  +M  +G +P+  +++SL++G 
Sbjct: 445 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 504

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               R  EA DL   M+  G  P+   Y+TLI+  C  G +++A+ +  +M      P+ 
Sbjct: 505 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 564

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY---------------TCMVKVL 350
            TYS LI+G  K      A ++  ++I     P+ V Y                 ++K  
Sbjct: 565 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 624

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C   + H+A  + E M   N  P    +N  I G C  G +  A  L  +M     +P+ 
Sbjct: 625 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 684

Query: 411 TTYNELLDGLLRVNRVKEAFELV 433
            T   L+  L +    +E  E++
Sbjct: 685 VTVITLIKALFKEGMNEEMSEVI 707



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 187/361 (51%), Gaps = 3/361 (0%)

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL--GGRTHEASDLWNR 260
           +  ++ S   +  ++ ++  +      G  P + S+ S+L   +   G     A +++  
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           MIR    PNV  Y+ LI G CS G + + +    +ME N C PNV TY+ LID + K G 
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  +   M S G  PN+++Y  ++  LC+     +A  ++E+M ++   P+ VT+NT
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            + G C  G    A+ +  +M +    P++ TY  L++ + +   +  A E   ++   G
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++ N  TY T++ G  R G++ EA+++L +M   G     +T+N  I+ +C   ++  A+
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            ++  +   G   PD++SY++++ G C  G +  AF   Q+M+ +G+ P+  T++ L++ 
Sbjct: 445 GVVQEMVEKG-LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 503

Query: 561 L 561
           L
Sbjct: 504 L 504



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 6/89 (6%)

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG---MQEAFIYL 539
           F++++ +Y     ++ A+  ++  +  G + P ++SY S+L  I  S G   +    +Y 
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSG-FMPGVLSYNSVLDAIVRSRGSVKLSAEEVY- 202

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           ++M+   + PN  T+N+L+R  F ++G L
Sbjct: 203 REMIRSRVSPNVYTYNILIRG-FCSVGEL 230


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 286/542 (52%), Gaps = 7/542 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+  +   +  +IN + R      AL +  ++ + G
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   + +L+      R S    +   M   G +PN  T+N L+  L  +N+   A 
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAV 206

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  KGC PD V+Y  +V+ +CK G  + A  L       +   GV +Y  +I+GL
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGL 266

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++A  L  EM  +GI PNV+TYS++IS LC+ G    +  +L  M  R  NP++
Sbjct: 267 CKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  EA  L++ M++    P++V YS+LI+G C +  +DEA  +   
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P+V +YS LI GF KA  +    +++  M   G   N V YT +++ L Q   
Sbjct: 387 MVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGD 446

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +  PPN +T+NT + GLC  G+++ AM + + +++ +  P I TYN 
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ ++V YNT++ G CR G   EA  L  +M  +G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           T  ++  +N +I A  + G    + +L+  +R  G +  D  S   L+  + + G + ++
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGD-ASTIGLVTNMLHDGRLDKS 624

Query: 536 FI 537
           F+
Sbjct: 625 FL 626



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 282/531 (53%), Gaps = 16/531 (3%)

Query: 42  RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           R GL+E     A+ +F  + +    P++  ++ +L A+   N+F ++  +   M+  GM 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            N +TY+IL+   C+ +++  A  +L +M   G  P+ V+ +++++  C   ++ EA  L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 158 AMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             + F +G       +N LI+GL   +K  EA  L+  MV +G  P+++TY  +++ LC 
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G+ + +  +L +M      P +  +T+++ G        +A +L+  M  +G  PNVV 
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS+LI  LC+ G   +A  +   M E    P+V T+SALID F K G L+ A ++++ M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                P++V Y+ ++   C ++   +A  + E M  ++C P+ V+++T IKG C   RVD
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             M+L  +M Q   + N  TY  L+ GL +      A E+  E+   G+  NI+TYNT+L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 453 HGVCRAGMVVEA---FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            G+C+ G + +A   F+ L +  +E T     T+NI+I   CK GKV +   L   +   
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           G   PD+++Y +++ G C  G  +EA    ++M  +G  PN   +N L+R+
Sbjct: 531 G-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 253/514 (49%), Gaps = 18/514 (3%)

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN---- 114
           F +  T K + H   +L+     + ++P +S   R        +Y+   K L +N     
Sbjct: 5   FAIASTAKRFVH--RSLVVRGNVATVSPSFSFFWRRAFSGKT-SYDYREK-LSRNGLSEL 60

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV-------EEARELAMRFGSGVSV 167
           ++D A  L  EM      P  + ++ ++S+I K+ +        E+ + L M        
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNH--YT 118

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y+ LIN  C+  ++  A  +L +M+  G +PN++T S++++  C    +  ++ ++ QMF
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           V G  PN  +F +L+ G  L  +  EA  L +RM+ +G  P++V Y  +++GLC  G  D
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A  +  +ME+    P V  Y+ +IDG  K  ++  A  ++  M + G  PNVV Y+ ++
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC    +  A  L+  M      P+  TF+  I      G++  A KL D+M +    
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+I TY+ L++G    +R+ EA ++   +       ++V+Y+T++ G C+A  V E  +L
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   + +T+  +I    + G  + A ++   +   G   P+I++Y +LL G+C
Sbjct: 419 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLC 477

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +G +++A +  + +    + P   T+N+++  +
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 215/397 (54%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           ++ L++ + K +K +    L  +M + G+  N  TYS +I+  C    +  +L +LG+M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  PNI + +SLL GY    R  EA  L ++M   G+ PN V ++TLIHGL  +    
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M    C P++ TY  +++G  K G+   A  + N+M      P V+ YT ++
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTII 263

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+N     A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ T++ L+D  ++  ++ EA +L  E+ K  I  +IVTY+++++G C    + EA Q+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D ++++ +I  +CK  +V+  ++L   +   G    + ++YT+L+ G+ 
Sbjct: 384 FEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVG-NTVTYTTLIQGLF 442

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +G    A    ++M+++G+ PN  T+N L+  L  N
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 198/390 (50%), Gaps = 2/390 (0%)

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NGL  E K+++A  L  EMV     P++I +S ++S++  +   +  + +  QM   G  
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N ++++ L+  +    +   A  +  +M++ G+ PN+V  S+L++G C +  + EAV++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QM      PN  T++ LI G         A  + +RM++ GC P++V Y  +V  LC+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A  L+ KM      P  + + T I GLC    +D A+ L  +M+     PN+ T
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+  L    R  +A  L++++ +  I  ++ T++ ++    + G +VEA +L  +M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
                   +T++ +I  +C   +++ A Q+ + +     + PD++SY++L+ G C +  +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVSYSTLIKGFCKAKRV 412

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++M   G+  N  T+  L++ LF
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIQGLF 442



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 36/191 (18%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++D A+ L  +M +    P+I  +++LL  + ++N+      L  +++  G+  N  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
                                              I+I  +C++ ++  A+ +L ++   
Sbjct: 121 -----------------------------------ILINCFCRRSQLPLALAVLGKMMKL 145

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + P+I++ +SLL G C+S  + EA   + +M   G  PN  T+N L+  LF +     
Sbjct: 146 G-YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204

Query: 570 PVYILDDIMAN 580
            V ++D ++A 
Sbjct: 205 AVALIDRMVAK 215


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 288/555 (51%), Gaps = 31/555 (5%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++I SY  +     A          G  P+V  YN +L AL ++          S+M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G+ PNV+TYNIL++ALC   R++ A  ++ +M   GCAP+AV+Y T+V++ C+ G+++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 153 EARELA--MR----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            A  +   MR        +  +N+++NGLCK  ++E A  +  EMV  G+ P+V++Y+T+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +S  C VG +  SL +  +M  RG  P++ +FTSL+      G   +A  L  +M   G 
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N V ++ LI G C  G +D+A+    +M +    P+V  Y+ALI+G+ K G +  A +
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M +    P+VV Y+ ++   C+      A  L +KM  +   P+ +T+++ I+GLC
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R++ A +L + M Q    P+  TY  L+DG  +   V++A  L  E+ + G+  ++V
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN---------------IIIYAYC 491
           TY+ +++G+ ++    EA +LL K+  E    D I ++                ++  +C
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 564

Query: 492 KQGKVNNAIQ----LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            +G +  A +    +LDR      W  D   Y+ L+ G C  G +++A  + ++ML  G 
Sbjct: 565 MKGLMKEADKVYQSMLDR-----NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619

Query: 548 CPNFATWNVLVRSLF 562
            PN  +   LVR LF
Sbjct: 620 SPNSTSTISLVRGLF 634



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 269/555 (48%), Gaps = 49/555 (8%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +   +  L  M   GV+ +   +  ++ +    G  E+A+ +   +R  G  P    YN 
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192

Query: 71  ILDALLAENRFSMINPIYSNMKRDG-MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           ++ A            + S M+ +G  +PN+ T+N ++  LCK  R++GA K+  EM  +
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G APD VSY T++S  CK+G                          C    + E+  +  
Sbjct: 253 GLAPDVVSYNTLLSGYCKVG--------------------------C----LHESLAVFS 282

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  RG+ P+V+T++++I + C  GN+E ++ ++ QM  RG   N  +FT+L+ G+   G
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +A      M + G  P+VV Y+ LI+G C  G MD A  +  +ME     P+V TYS
Sbjct: 343 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +I G+ K GNL  A Q+  +M+  G  P+ + Y+ +++ LC+    + A  L E M   
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+  T+ T I G C  G V+ A+ L D+M +   LP++ TY+ L++GL +  R KEA
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 522

Query: 430 FELVTEIEK---------------CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             L+ ++                 C  +    +   +L G C  G++ EA ++   ML  
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 582

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             KLD   ++I+I+ +C+ G V  A+    ++   G ++P+  S  SL+ G+   G + E
Sbjct: 583 NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG-FSPNSTSTISLVRGLFEEGMVVE 641

Query: 535 AFIYLQKMLNEGICP 549
           A   +Q +L    CP
Sbjct: 642 ADNAIQDLLT--CCP 654



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 251/507 (49%), Gaps = 25/507 (4%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDALLAE 78
            M+  G + +   + +++ ++ R G  + A ++   +RE G  KP +  +N +++ L   
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R      ++  M R+G+ P+V +YN LL   CK   +  +  +  EM  +G  PD V++
Sbjct: 237 GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296

Query: 139 TTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           T+++ + CK G +E+A       RE  +R       + ALI+G CK+  +++A   + EM
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMRERGLRMNE--VTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              GI P+V+ Y+ +I+  C +G ++ +  ++ +M  +   P++ ++++++ GY   G  
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L  +M+++G LP+ + YS+LI GLC    +++A  +   M +    P+  TY+ L
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K GN+  A  + + MI  G  P+VV Y+ ++  L ++    +AH L+ K+  E+ 
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 372 PPNTVTFNTF---------------IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            P+ + ++                 +KG C  G +  A K+   M       + + Y+ L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  R   V++A     ++ + G   N  +  +++ G+   GMVVEA   +  +L    
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLL 503
             DA     +I    K+G V+  I +L
Sbjct: 655 LADAEASKALIDLNRKEGNVDALIDVL 681



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 203/444 (45%), Gaps = 25/444 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +   ++G + +  +M  EG++     + ++++ Y +VG   ++L +F  + + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +  ++ A            + + M+  G+  N  T+  L+   CK   +D A 
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
             + EM   G  P  V Y  +++  CKLG+++ AREL     A R    V  Y+ +I+G 
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   ++ AF L  +M+ +G+ P+ ITYS++I  LC+   +  +  +   M   G  P+ 
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G+   G   +A  L + MIR+G LP+VV YS LI+GL  +    EA  + ++
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+   Y AL+   +KA                       +   ++K  C   +
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKA--------------------EFKSVVALLKGFCMKGL 568

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  + + M   N   +   ++  I G C  G V  A+    QM +    PN T+   
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 628

Query: 416 LLDGLLRVNRVKEAFELVTEIEKC 439
           L+ GL     V EA   + ++  C
Sbjct: 629 LVRGLFEEGMVVEADNAIQDLLTC 652



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG    +D  + L+++M+ + V      + ++I+ Y +VG  + A ++  ++ + G+ P
Sbjct: 375 KLGR---MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 431

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               Y+ ++  L  E R +    ++ NM + G++P+ FTY  L+   CK   V+ A  L 
Sbjct: 432 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 491

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-------------- 169
            EM  KG  PD V+Y+ +++ + K  + +EA  L  +      V +              
Sbjct: 492 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 551

Query: 170 ------ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
                 AL+ G C +  ++EA  +   M+DR    +   YS +I   C  GNV  +L   
Sbjct: 552 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 611

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            QM   G +PN  S  SL++G    G   EA +    ++    L +  A   LI      
Sbjct: 612 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKE 671

Query: 284 GSMDEAVSVSYQMEENSCPPN 304
           G++D  + V   M  +   P+
Sbjct: 672 GNVDALIDVLCGMARDGLLPS 692


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/520 (30%), Positives = 265/520 (50%), Gaps = 6/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P+   +  +L ++     +S +  + + M   G+ P+V+T NIL
Sbjct: 132 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 191

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C   R+  A+ +L ++   GC PD  ++ T++  +C  G++ EA  L  +     F
Sbjct: 192 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 251

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  L+NGLCK      A  LL  MV +   PNVI Y+TII SLC    V  +  
Sbjct: 252 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 311

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G +P+I ++ SL+            + L N M+    +PNVV +ST++  LC
Sbjct: 312 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 371

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +  A  V   M +    P+V TY+AL+DG      +  A ++++ M+  GC PNV 
Sbjct: 372 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 431

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   CQ     +A  L+E+M+ +    +TVT+NT I GLC  GR+  A+ L  +M
Sbjct: 432 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 491

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P++ TY  LLD L + + + EA  L+  IE   +  +I+ YN  + G+CRAG +
Sbjct: 492 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 551

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  L   +  +G + D  T+NI+I+  CK+G ++ A +L  ++   G  + D   Y +
Sbjct: 552 EAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG-CSRDGCIYNT 610

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G   S     A   LQ+ML EG   + +T  ++V  L
Sbjct: 611 IIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 214/421 (50%), Gaps = 6/421 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +   EG       + +++N   +VG    A+++   + +   +P V  YN I+D+L
Sbjct: 241 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 300

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + + +    ++S M   G+ P++FTYN L+ ALC          LL EM N    P+ 
Sbjct: 301 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 360

Query: 136 VSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           V ++T+V ++CK G +  A ++  M    GV      Y AL++G C   +++EA  +   
Sbjct: 361 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 420

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV +G  PNV +Y+ +I+  C +  ++ ++G+L QM ++G   +  ++ +L+ G    GR
Sbjct: 421 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 480

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A  L++ M+  G +P++V Y  L+  LC N  + EA+ +   +E ++   ++  Y+ 
Sbjct: 481 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 540

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
            IDG  +AG L  A  +++ + S G  P+V  Y  M+  LC+  +  +A+ L  KM    
Sbjct: 541 AIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENG 600

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C  +   +NT I+G         A +LL +M       +++T   +++ +L  + + ++F
Sbjct: 601 CSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVE-MLSDDGLDQSF 659

Query: 431 E 431
           E
Sbjct: 660 E 660



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 201/394 (51%), Gaps = 2/394 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A      M+     P+ + ++ +++S+  + +  T L +  QM   G  P++++   
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  +    R   A  +  ++++ G  P+   ++TLI GLC  G + EA+ +  +     
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V TY  L++G  K GN   A ++   M+   C PNV+AY  ++  LC++    +A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L  +M  +   P+  T+N+ I  LC          LL++M   + +PN+  ++ ++D L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +   +  A ++V  + K G++ ++VTY  ++ G C    + EA ++   M+ +G   + 
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            ++NI+I  YC+  +++ A+ LL+++   G    D ++Y +L+ G+C+ G +Q A     
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQG-LIADTVTYNTLIHGLCHVGRLQHAIALFH 489

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +M+  G  P+  T+ +L+  L  N  HL    +L
Sbjct: 490 EMVASGQIPDLVTYRILLDYLCKN-HHLAEAMVL 522



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 161/360 (44%), Gaps = 40/360 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L   CE   V  LL +M    +  +  VF +V+++  + G+   A  +   + + G
Sbjct: 331 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 390

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y  ++D     +       ++  M   G  PNV +YNIL+   C+  R+D A 
Sbjct: 391 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 450

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGL 175
            LL +M  +G   D V+Y T++  +C +G+++ A  L      SG    +  Y  L++ L
Sbjct: 451 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 510

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK H + EA  LL  +    +D +++ Y+  I  +C  G +E +  +   +  +G  P++
Sbjct: 511 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 570

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G    G   EA+ L+ +                                   
Sbjct: 571 RTYNIMIHGLCKRGLLDEANKLFRK----------------------------------- 595

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+EN C  +   Y+ +I GF ++    GA+Q+   M++ G S +V   T +V++L  + +
Sbjct: 596 MDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGL 655



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 58/129 (44%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+   I+   R G  E A  +F  +   GL+P V+ YN ++  L         N ++  M
Sbjct: 537 VYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 596

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             +G   +   YN +++   ++N   GA +LL EM  +G + D  + T IV  +   G  
Sbjct: 597 DENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLD 656

Query: 152 EEARELAMR 160
           +    L +R
Sbjct: 657 QSFERLRLR 665


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 150/489 (30%), Positives = 246/489 (50%), Gaps = 6/489 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           E  + P    Y  ++D L    + +    ++  +   G+ P+   Y  L+  LC  N  D
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALI 172
            A +L  +M  +GC P  V+Y  I+ + CK G +EEA +L  +         V  YN ++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +GLCK  ++EEA  L  EM   G  PN  +++TII  LC    ++ +  +  +M  R   
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  S+  L+ G    G+ +EA  L+ RM+  G  P+ V Y+ +IHG+C   ++DEA+ +
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M    C P+  T++ LID   K G +  A ++  RM  +G  P+VV Y+ ++  LC 
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A  L+E M    C P  VT NT I GLC  GR+  A ++LD M      P++ T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+ G  R  + + A EL++++   G+  N+VTY  ++ G+C+A  + EA  +  +M 
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   +  T+  +I  +C  G+V+  ++L   +   G  +PD + Y +L   +C SG  
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG-ISPDHVVYGTLAAELCKSGRS 481

Query: 533 QEAFIYLQK 541
             A   L++
Sbjct: 482 ARALEILRE 490



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 247/438 (56%), Gaps = 6/438 (1%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHK 180
           M  +  +PD+ SY  ++  + K G++ +AR+L  +   SGV+     Y +LI+GLC  + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            ++A  L  +M  RG  P+ +TY+ II + C  G +E +  ++ +M   G  P++ ++ +
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++ G    GR  EA  L+N M R G  PN  +++T+I GLC    +D+A  V ++ME   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
            PP+  +Y  LIDG AKAG L  A +++ RM+ +G +P+ V Y  ++  +C      +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L + M  + C P+  TFN  I   C  G++D A +LL +M     +P++ TY+ L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             + RV +A  L+ ++ K   +  +VT NT++HG+C+AG + EA ++L  M+  G   D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N +++ +C+ G+   A +LL  +   G   P++++YT+L+ G+C +  + EA     
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARG-LAPNVVTYTALVSGLCKANRLPEACGVFA 419

Query: 541 KMLNEGICPNFATWNVLV 558
           +M + G  PN  T+  L+
Sbjct: 420 QMKSSGCAPNLFTYTALI 437



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/552 (30%), Positives = 273/552 (49%), Gaps = 10/552 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +++  + L Q++   GV+ S   + S+I+        + A ++F  +   G
Sbjct: 16  LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+   YN I+DA            +   M  DG  P+V TYN ++  LCK+ RV+ A 
Sbjct: 76  CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVS-VYNALINGL 175
            L  EM   GC P+  S+ TI+  +C+  ++++A     E+  R     S  Y  LI+GL
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K+ EA+ L   M+D GI P+ +TY+ +I  +C    ++ +L +   M  +GC P+ 
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  L+  +   G+  EA  L  RM  +G +P+VV YSTLI GLCS   +D+A  +   
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +  C P V T + LI G  KAG +  A ++ + M+S+G SP+VV Y  +V   C+   
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L+  M      PN VT+   + GLC   R+  A  +  QMK   C PN+ TY  
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL--GKMLI 473
           L+ G     +V    +L  E+   GI  + V Y T+   +C++G    A ++L  G+  +
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 495

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
                    +   +      GK+  A+  + D +RGG    P+  +  SL+ G+C SG  
Sbjct: 496 RSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCA--SLVAGLCKSGQG 553

Query: 533 QEAFIYLQKMLN 544
            EA   L+++++
Sbjct: 554 GEARAVLEEIMD 565



 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 249/476 (52%), Gaps = 6/476 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M    + P+ ++Y IL+  L K  +++ A  L  ++ + G  P  V+YT+++  +C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 151 VEEARELAM---RFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            ++AREL     R G   S   YN +I+  CK   +EEA  L+ +M++ G  P+V+TY+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  LC  G VE +L +  +M   GC PN  S  +++ G     +  +A  +++ M    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+  +Y  LI GL   G ++EA  +  +M ++   P+  TY+ +I G   A  L  A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++  M S GC P+   +  ++   C+     +A  L+++M  +   P+ VT++T I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   RVD A  LL+ M + +C P + T N L+ GL +  R+KEA E++  +   G   ++
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYNT++HG CRAG    A +LL  M+  G   + +T+  ++   CK  ++  A  +  +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++  G   P++ +YT+L+ G C++G +        +M+  GI P+   +  L   L
Sbjct: 421 MKSSG-CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 281/524 (53%), Gaps = 7/524 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M++ GVS +   +  +IN   R      AL +  ++ + G  P++   N +L+     
Sbjct: 89  EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           NR S    +   M   G +P+  T+  L+  L ++N+   A  L+  M  KGC PD V+Y
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208

Query: 139 TTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVD 193
             +++ +CK G+ + A  L  +   G     V +Y+ +I+ LCK   +++A  L  EM +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +GI P+V TYS++IS LC+ G    +  +L  M  R  NPN+ +F SL+  +   G+  E
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L++ MI+    PN+V Y++LI+G C +  +DEA  +   M    C P+V TY+ LI+
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF KA  ++   +++  M   G   N V YT ++    Q +    A  + ++M  +   P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N +T+NT + GLC  G+++ AM + + +++ +  P+I TYN + +G+ +  +V++ ++L 
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +   G++ +++ YNT++ G C+ G+  EA+ L  KM  +G   D+ T+N +I A+ + 
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           G    + +L+  +R    +  D  +Y  L+  + + G + + F+
Sbjct: 569 GDKAASAELIKEMR-SCRFAGDASTY-GLVTDMLHDGRLDKGFL 610



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 253/508 (49%), Gaps = 6/508 (1%)

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G+   +  YN +++ L   ++ S    I   M + G  P++ T N LL   C  NR+  
Sbjct: 94  LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALIN 173
           A  L+ +M   G  PD V++TT+V  + +  +  EA  L  R         +  Y A+IN
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  + + A  LL +M    I+ +V+ YST+I SLC   +V+ +L +  +M  +G  P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ +++SL+      GR  +AS L + M+     PNVV +++LI      G + EA  + 
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M + S  PN+ TY++LI+GF     L  A QI+  M+S  C P+VV Y  ++   C+ 
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                   L   M+      NTVT+ T I G       D A  +  QM      PNI TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N LLDGL +  ++++A  +   ++K  ++ +I TYN +  G+C+AG V + + L   + +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G K D I +N +I  +CK+G    A  L  +++  G   PD  +Y +L+      G   
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKA 572

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +   +++M +     + +T+ ++   L
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 213/440 (48%), Gaps = 5/440 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++++   +   A +A+ +  R+   G +P +  Y  +++ L 
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M++  +E +V  Y+ ++ +LCK   VD A  L  EM NKG  PD  
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A  L       +    V  +N+LI+   KE K+ EA  L  EM
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDPN++TY+++I+  C    ++ +  I   M  + C P++ ++ +L+ G+    + 
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +  +L+  M R G + N V Y+TLIHG       D A  V  QM  +   PN+ TY+ L
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M + +C+         L   ++ +  
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ + +NT I G C  G  + A  L  +MK+   LP+  TYN L+   LR      + E
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576

Query: 432 LVTEIEKCGIQLNIVTYNTI 451
           L+ E+  C    +  TY  +
Sbjct: 577 LIKEMRSCRFAGDASTYGLV 596



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 226/451 (50%), Gaps = 33/451 (7%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
           ++D A  L  EM      P  V ++ ++S+I K+ + +    L + FG  + +       
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD----LVISFGEKMEIL------ 94

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
                               G+  N+ TY+ +I+ LC    +  +L ILG+M   G  P+
Sbjct: 95  --------------------GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPS 134

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +  SLL G+  G R  EA  L ++M+  G+ P+ V ++TL+HGL  +    EAV++  
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M    C P++ TY A+I+G  K G    A  + N+M       +VV Y+ ++  LC+  
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYR 254

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A +L  +M  +   P+  T+++ I  LC  GR   A +LL  M + +  PN+ T+N
Sbjct: 255 HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D   +  ++ EA +L  E+ +  I  NIVTYN++++G C    + EA Q+   M+ +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
               D +T+N +I  +CK  KV + ++L  D  R G   N   ++YT+L+ G   +    
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN--TVTYTTLIHGFFQASDCD 432

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            A +  ++M+++G+ PN  T+N L+  L  N
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 217/419 (51%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+++M V+G       + +VIN   + G  + AL +  ++ +  ++  V IY+ ++D+L 
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +++ M   G+ P+VFTY+ L+  LC   R   A +LL +M  +   P+ V
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ +++ +  K G++ EA +L            +  YN+LING C   +++EA  +   M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +   P+V+TY+T+I+  C    V   + +   M  RG   N  ++T+L+ G+      
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ +M+ +G  PN++ Y+TL+ GLC NG +++A+ V   ++++   P++ TY+ +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            +G  KAG +     ++  +   G  P+V+AY  M+   C+  +  +A++L  KM  +  
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+NT I+     G    + +L+ +M+      + +TY  + D +L   R+ + F
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDGRLDKGF 609



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 180/355 (50%), Gaps = 5/355 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M  +G+      + S+I+     G    A ++   + E  
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++DA   E +      ++  M +  ++PN+ TYN L+   C ++R+D A 
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQV----EEARELAMRFGSGVSV-YNALINGL 175
           ++   M +K C PD V+Y T+++  CK  +V    E  R+++ R   G +V Y  LI+G 
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +    + A  +  +MV  G+ PN++TY+T++  LC  G +E ++ +   +      P+I
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  + +G    G+  +  DL+  +  +G  P+V+AY+T+I G C  G  +EA ++  +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           M+E+   P+  TY+ LI    + G+   ++++   M S   + +   Y  +  +L
Sbjct: 546 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 181/371 (48%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ E D    LL +M+   +     ++ +VI+S  +    + AL +F  +   G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L    R+S  + + S+M    + PNV T+N L+ A  K  ++  A 
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  EM  +   P+ V+Y ++++  C   +++EA+++     S      V  YN LING 
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+ +   L  +M  RG+  N +TY+T+I       + + +  +  QM   G +PNI
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL G    G+  +A  ++  + +    P++  Y+ +  G+C  G +++   +   
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+V  Y+ +I GF K G    A  ++ +M  +G  P+   Y  +++   ++  
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570

Query: 356 FHQAHSLIEKM 366
              +  LI++M
Sbjct: 571 KAASAELIKEM 581



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 161/318 (50%), Gaps = 1/318 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L +  LL  +  EA DL+  M++    P++V +S L+  +      D  +S   +ME   
Sbjct: 36  LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              N+ TY+ +I+   +   L  A  I  +M+  G  P++V    ++   C  N   +A 
Sbjct: 96  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L+++M      P+TVTF T + GL    +   A+ L+++M    C P++ TY  +++GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +      A  L+ ++EK  I+ ++V Y+T++  +C+   V +A  L  +M  +G + D 
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T++ +I   C  G+ ++A +LL  +    + NP+++++ SL+      G + EA     
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334

Query: 541 KMLNEGICPNFATWNVLV 558
           +M+   I PN  T+N L+
Sbjct: 335 EMIQRSIDPNIVTYNSLI 352


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 268/520 (51%), Gaps = 6/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+  F R+      P   +++ +L A++    +     +++ ++  G+ P++ T+ IL
Sbjct: 37  DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRF 161
           +      +    A+ LL  +   G  P+ V++ TI++  C  G + +A +     LA  +
Sbjct: 97  INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y  LINGL K  +I+ A  LL EM    + PN++ YS +I  LC  G V  +LG
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  Q+  RG   +  ++ SL+ G    GR  E + L  +M+RE   P+   ++ LI  LC
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M +    P++ TY+AL++G+    N+  A +++NRM+  G  P+V+
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++   C+  M  +A  L +++  +N  P   ++N+ I GLC  GR+    KLLD+M
Sbjct: 337 NYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM 396

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                 P++ TYN L+D L +  R+ EA  ++  + K G++ NIVTYN ++ G C    V
Sbjct: 397 HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNV 456

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  +  +M+  G + D + +N++I  YCK   V+ AI L   +R      PDI SY S
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN-LIPDIASYNS 515

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L+ G+CN G +      L +M + G  P+  T+N+L+ + 
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555



 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 279/563 (49%), Gaps = 8/563 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  Q++ +G+S S   F  +IN Y        A  +   I + G +P +  +N I++   
Sbjct: 77  LFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                        N+   G   + FTY  L+  L KN ++  A  LL EM      P+ V
Sbjct: 137 INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+ ++  +CK G V +A  L  + G          YN+LI+G C   + +E   LL +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V   +DP+  T++ +I +LC  G +  + G+L  M  RG  P+I ++ +L++GY      
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENV 316

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           HEA +L+NRM++ G  P+V+ Y+ LI G C    +DEA+ +  ++   +  P + +Y++L
Sbjct: 317 HEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL 376

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG   +G +    ++ + M  +   P+VV Y  ++  LC+     +A  ++  M  +  
Sbjct: 377 IDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+N  + G C    V+ A  + ++M +    P+I  YN L++G  +   V EA  
Sbjct: 437 KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIV 496

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+    +  +I +YN+++ G+C  G +    +LL +M   G   D IT+NI++ A+C
Sbjct: 497 LFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K    + AI L  +I   G W PD  +  +++  +C    ++ A   L+ +L  G  PN 
Sbjct: 557 KTQPFDKAISLFRQIV-EGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV 614

Query: 552 ATWNVLVRSLFSNLGHLGPVYIL 574
            T+ +L+ +L  + G  G   +L
Sbjct: 615 QTYTILINALCKD-GSFGEAMLL 636



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 252/553 (45%), Gaps = 76/553 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  +I    +LLQ+M+   V  +  ++ ++I+   + G    AL +  +I E G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++D   +  R+  +  + + M R+ ++P+ +T+NIL+ ALCK  R+  A 
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-------------------- 160
            +L  M  +G  PD V+Y  ++   C    V EAREL  R                    
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345

Query: 161 --------------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                                   ++ YN+LI+GLC   +I     LL EM      P+V
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY+ +I +LC  G +  +LG+L  M  +G  PNI ++ +++ GY L    + A D++NR
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M++ G  P+++ Y+ LI+G C    +DEA+ +  +M   +  P++ +Y++LIDG    G 
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +    ++ + M  +G SP+V+ Y  ++   C+   F +A SL  ++  E   P+  T + 
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHA 584

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            +  LC   ++  A   L  +  + C PN+ TY  L++ L                    
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL-------------------- 624

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
                          C+ G   EA  LL KM       DAITF III    ++ + + A 
Sbjct: 625 ---------------CKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 501 QLLDRIRGGGEWN 513
           +L + +   G  N
Sbjct: 670 KLREEMIARGLVN 682



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 199/418 (47%), Gaps = 36/418 (8%)

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +++A      MV     P    +  ++ ++  +G+  T++ +  Q+  +G +P+I
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC-------------- 281
            +FT L+  Y     T  A  L   +++ G+ PN+V ++T+I+G C              
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 282 ---------------------SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
                                 NG +  A+ +  +ME++S  PN+  YSALIDG  K G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  + +++   G   + V Y  ++   C    + +   L+ KM  EN  P+  TFN 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GR+  A  +L  M +    P+I TYN L++G      V EA EL   + K G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++ +++ YN ++ G C+  MV EA  L  ++  +       ++N +I   C  G++++  
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +LLD + G  +  PD+++Y  L+  +C  G + EA   L  M+ +G+ PN  T+N ++
Sbjct: 391 KLLDEMHGSAQP-PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 46/321 (14%)

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           H  C   ++D+AV+   +M     PP  + +  L+    + G+   A  ++ ++ S G S
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 338 PNVVAYTCMVKVLCQNNMFHQAH-----SLIEKMAFENCPPNTVTFNTFIKGLC------ 386
           P++  +T ++     N  FHQ+H     SL+  +      PN VTFNT I G C      
Sbjct: 88  PSIATFTILI-----NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIF 142

Query: 387 -----------------------------GCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
                                          G++  A+ LL +M++    PN+  Y+ L+
Sbjct: 143 KALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL +   V +A  L ++I + GI L+ VTYN+++ G C  G   E  QLL KM+ E   
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D  TFNI+I A CK+G++  A  +L  +   GE  PDI++Y +L+ G C+   + EA  
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARE 321

Query: 538 YLQKMLNEGICPNFATWNVLV 558
              +M+  G+ P+   +NVL+
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLI 342


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/557 (28%), Positives = 280/557 (50%), Gaps = 21/557 (3%)

Query: 22  KVEGVSCSEGV---FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           K  G SC  G     + + + +  +   E A+ +F  +      P+V  +  ++  ++  
Sbjct: 33  KASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRM 92

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R  ++  +Y  M+R  +  +++++NIL+K  C  +++  A     ++   G  PD V++
Sbjct: 93  ERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTF 152

Query: 139 TTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           TT++  +C   +V EA +   +         V  +  L+NGLC+E +I EA  LL  M++
Sbjct: 153 TTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTH 252
            G+ P  ITY TI+  +C  G+  ++L +L +M  V    PN+  +++++      GR  
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M  +G  P++  Y+++I G CS+G   +A  +  +M E    P+V TY+ALI
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    A+++++ M+  G  PN + Y  M+   C+ +    A  +   MA + C 
Sbjct: 333 NAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCS 392

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+  TF T I G CG  R+D  M+LL +M +   + N  TYN L+ G   V  +  A +L
Sbjct: 393 PDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 452

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML-----------IEGTKLDAI 481
             ++   G+  +IVT NT+L G+C  G + +A ++   M              G + D +
Sbjct: 453 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 512

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I     +GK   A +L + +   G   PD I+Y+S++ G+C    + EA      
Sbjct: 513 TYNILICGLINEGKFLEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFVS 571

Query: 542 MLNEGICPNFATWNVLV 558
           M ++   PN  T+N L+
Sbjct: 572 MGSKSFSPNVVTFNTLI 588



 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 286/583 (49%), Gaps = 18/583 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L Q+M+ + + C    F  +I  +        AL  F +I + GL P V  +  +
Sbjct: 96  DLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTL 155

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S     +  M      PNV T+  L+  LC+  R+  A  LL  M   G 
Sbjct: 156 LHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAF 185
            P  ++Y TIV  +CK G    A  L  +          V +Y+A+I+ LCK+ +  +A 
Sbjct: 216 QPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQ 275

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++GI P++ TY+++I   C  G    +  +L +M  R  +P++ ++ +L+  +
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAF 335

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA++L++ M+  G +PN + Y+++I G C    +D A  + Y M    C P+V
Sbjct: 336 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 395

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LIDG+  A  +    ++ + M   G   N V Y  ++   C     + A  L ++
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      P+ VT NT + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 456 MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYN 515

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 516 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSK 575

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               + +TFN +I  YCK G+V++ ++L   +   G    D I Y +L++G    G +  
Sbjct: 576 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG-IVADAIIYITLIYGFRKVGNING 634

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           A    Q+M++ G+ P+  T   ++   +S       V +L+D+
Sbjct: 635 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 250/493 (50%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+PT   Y  I+D +  + +  S +N +   
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   + PNV  Y+ ++ +LCK+ R   A  L  EM  KG  PD  +Y +++   C  G+
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGR 305

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L       +    V  YNALIN   KE K  EA  L  EM+ RGI PN ITY++
Sbjct: 306 WSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +   M  +GC+P++ +FT+L+ GY    R  +  +L + M R G
Sbjct: 366 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + N V Y+TLIHG C  G ++ A+ +S QM  +   P++ T + L+DG    G L  A 
Sbjct: 426 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 485

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V+ Y  ++  L     F +A  L E+M      P+
Sbjct: 486 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 545

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++   M      PN+ T+N L++G  +  RV +  EL  
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFC 605

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  + + Y T+++G  + G +  A  +  +M+  G   D IT   ++  +  + 
Sbjct: 606 EMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKE 665

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L+ ++
Sbjct: 666 ELERAVAMLEDLQ 678



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 200/418 (47%), Gaps = 16/418 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +       Q L  +M+ +G+      + S+I  +   G    A ++   + E  
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN +++A + E +F     +Y  M   G+ PN  TYN ++   CK +R+D A 
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGL 175
            +   M  KGC+PD  ++TT++   C   ++++  EL     R G  +    YN LI+G 
Sbjct: 381 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-------- 227
           C    +  A  L  +M+  G+ P+++T +T++  LCD G ++ +L +   M         
Sbjct: 441 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 500

Query: 228 ---VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                G  P++ ++  L+ G +  G+  EA +L+  M   G +P+ + YS++I GLC   
Sbjct: 501 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA  +   M   S  PNV T++ LI+G+ KAG +    +++  M   G   + + Y 
Sbjct: 561 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 620

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            ++    +    + A  + ++M      P+T+T    + G      ++ A+ +L+ ++
Sbjct: 621 TLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 1/166 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G   +  +++A +L +++ +     ++V +  ++  V R         L  KM  +
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             + D  +FNI+I  +C   K+  A+    +I   G  +PD++++T+LL G+C    + E
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG-LHPDVVTFTTLLHGLCVEDRVSE 167

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           A  +  +M      PN  T+  L+  L      +  V +LD +M +
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 172/517 (33%), Positives = 271/517 (52%), Gaps = 6/517 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L +F ++   GL P VK  N IL  L  EN  S    +Y  M++ G++P V TYN +L +
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSV- 167
            CK  RVD A +LL EM  +GC P+ V+Y  +V+ + K G++E+A+ L      SG++V 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 168 ---YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN LING C++    EAF L+ EMV+R   P + TY+T++  LC    V        
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M      P+I SF SLL GY   G   EA  L++ +     +P V+ Y+TLIHGLC  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A+ +  +M +    P++ TY+ L++G  K G +  A   +N M+S G  P+  AY 
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
             +    +      A S+ E+M     PP+ +T+N F+  LC  G  + A  LL+ M   
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             +P+  TY  +++G ++   +++A E+  E+   G+  ++VTY  ++H      M+  A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           F    KML +    + IT+N II   C   +++ A +  D +   G   P+  SYT L+ 
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGIL-PNKFSYTILIN 643

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             CN G  +EA    ++ML+  I P+  T +V +++L
Sbjct: 644 ESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 5/462 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   ++  +D    LL +M+  G   ++  +  ++N   + G  EQA  +   +   G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L  +   YN +++    +  F     +   M      P + TYN L+  LCK  +V G  
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
               +M      PD VS+ +++   C+ G + EA     EL  R     V  YN LI+GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    ++ A  L  EM D+G+ P++ TY+ +++    +G V  + G   +M  +G  P+ 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ + + G +    T  A  +   M+  GF P+V+ Y+  +H LC  G+ +EA  +   
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   P+  TY+++I+GF K G+L  A +++N M+S G +P+VV YT ++       M
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A     KM  ++ P N +T+N  I GLC   R+D A K  D+M++   LPN  +Y  
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L++    +   +EA  L  E+    IQ +  T++  L  + R
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 163/363 (44%), Gaps = 8/363 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ GV+     M     +     F S++  Y R G   +A  +F  ++   L PTV  YN
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYN 394

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L           +   M   G+ P++FTY IL+    K   V  A     EM +K
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +Y T +    K+     A       LA  F   V  YN  ++ LC++   EEA
Sbjct: 455 GLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  MV  G+ P+ +TY++II+     G++  +  +  +M  +G  P++ ++T L+  
Sbjct: 515 CDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +        A   +++M+ +    NV+ Y+ +I+GLC    MDEA     +MEE    PN
Sbjct: 575 HAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPN 634

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH---S 361
             +Y+ LI+     G    A +++  M+     P+   ++  +K L ++   H      S
Sbjct: 635 KFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVES 694

Query: 362 LIE 364
           LI+
Sbjct: 695 LIQ 697


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 172/517 (33%), Positives = 271/517 (52%), Gaps = 6/517 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L +F ++   GL P VK  N IL  L  EN  S    +Y  M++ G++P V TYN +L +
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSV- 167
            CK  RVD A +LL EM  +GC P+ V+Y  +V+ + K G++E+A+ L      SG++V 
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 168 ---YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN LING C++    EAF L+ EMV+R   P + TY+T++  LC    V        
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFS 344

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M      P+I SF SLL GY   G   EA  L++ +     +P V+ Y+TLIHGLC  G
Sbjct: 345 DMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWG 404

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A+ +  +M +    P++ TY+ L++G  K G +  A   +N M+S G  P+  AY 
Sbjct: 405 YLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYN 464

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
             +    +      A S+ E+M     PP+ +T+N F+  LC  G  + A  LL+ M   
Sbjct: 465 TRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSD 524

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             +P+  TY  +++G ++   +++A E+  E+   G+  ++VTY  ++H      M+  A
Sbjct: 525 GLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLA 584

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           F    KML +    + IT+N II   C   +++ A +  D +   G   P+  SYT L+ 
Sbjct: 585 FMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGIL-PNKFSYTILIN 643

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             CN G  +EA    ++ML+  I P+  T +V +++L
Sbjct: 644 ESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 223/462 (48%), Gaps = 5/462 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   ++  +D    LL +M+  G   ++  +  ++N   + G  EQA  +   +   G
Sbjct: 221 MLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG 280

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L  +   YN +++    +  F     +   M      P + TYN L+  LCK  +V G  
Sbjct: 281 LNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVR 340

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
               +M      PD VS+ +++   C+ G + EA     EL  R     V  YN LI+GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    ++ A  L  EM D+G+ P++ TY+ +++    +G V  + G   +M  +G  P+ 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ + + G +    T  A  +   M+  GF P+V+ Y+  +H LC  G+ +EA  +   
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   P+  TY+++I+GF K G+L  A +++N M+S G +P+VV YT ++       M
Sbjct: 521 MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQM 580

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A     KM  ++ P N +T+N  I GLC   R+D A K  D+M++   LPN  +Y  
Sbjct: 581 LDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTI 640

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L++    +   +EA  L  E+    IQ +  T++  L  + R
Sbjct: 641 LINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHR 682



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 159/353 (45%), Gaps = 5/353 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ GV+     M     +     F S++  Y R G   +A  +F  ++   L PTV  YN
Sbjct: 335 QVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYN 394

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L           +   M   G+ P++FTY IL+    K   V  A     EM +K
Sbjct: 395 TLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +Y T +    K+     A       LA  F   V  YN  ++ LC++   EEA
Sbjct: 455 GLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEA 514

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  MV  G+ P+ +TY++II+     G++  +  +  +M  +G  P++ ++T L+  
Sbjct: 515 CDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHA 574

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +        A   +++M+ +    NV+ Y+ +I+GLC    MDEA     +MEE    PN
Sbjct: 575 HAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPN 634

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             +Y+ LI+     G    A +++  M+     P+   ++  +K L ++   H
Sbjct: 635 KFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH 687


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 280/591 (47%), Gaps = 68/591 (11%)

Query: 4   KLGEKCEI-DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           ++GEK  + D    L + M  +G+      +  +IN +     + +A  M   + + GLK
Sbjct: 249 EMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLK 308

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    YN ++D  + +        I   M   G+E N+  +N LL  +CK  +++ A ++
Sbjct: 309 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 368

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIE 182
           + EM  KG  PD+ +Y+                               LI G C+   + 
Sbjct: 369 MQEMMEKGVEPDSQTYSL------------------------------LIEGHCRGQNMA 398

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            AF LL EM  R + P V+TYS II+ LC  GN++ +  IL +M + G  PN   +T+L+
Sbjct: 399 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             +   GR  E+  +  RM  +G LP+V  Y++LI G C    M+EA +   +M E    
Sbjct: 459 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 518

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ---------- 352
           PN  TY A IDG++KAG +  A + +N M+S G  PNV  YT +++  C+          
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 578

Query: 353 -------------------------NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
                                    N   H+A  +  ++  +   PN  T+N+ I G C 
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G VD A +LL++M      P+I TYN L+DGL +   ++ A  L  +IE  G+  N VT
Sbjct: 639 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 698

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  ++ G C++     AFQLL +ML+ G   DA  +N+I+   CK+ K   A+ L   + 
Sbjct: 699 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 758

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             G      +S+ +L+ G C SG +QEA   L++M+ +   PN  T+  L+
Sbjct: 759 EKG--FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLI 807



 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 283/573 (49%), Gaps = 8/573 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + +L +M   G+      + ++I+ + R G  EQA ++   +   G++  + I+N +L+
Sbjct: 295 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 354

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            +    +      I   M   G+EP+  TY++L++  C+   +  A++LL EM  +  AP
Sbjct: 355 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 414

Query: 134 DAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
             ++Y+ I++ +C+ G ++      RE+ M        VY  L+    KE ++EE+  +L
Sbjct: 415 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 474

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M ++GI P+V  Y+++I   C    +E +   L +M  R   PN H++ + + GY   
Sbjct: 475 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 534

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G    A   +N M+  G LPNV  Y+ LI G C  G++ EA SV   +       +V TY
Sbjct: 535 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 594

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI G ++ G +  A  I++ +   G  PN   Y  ++   C+     +A  L+E+M  
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+ VT+N  I GLC  G ++ A  L D ++     PN  TY  ++DG  +      
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 714

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           AF+L+ E+   G+  +   YN IL+  C+     +A  L  +ML +G     ++FN +I 
Sbjct: 715 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIE 773

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            YCK GK+  A  LL+ +    ++ P+ ++YTSL+   C +G M EA     +M    + 
Sbjct: 774 GYCKSGKLQEANHLLEEMI-EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832

Query: 549 PNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           P   T+  L+   + N+G++  V  L + M  K
Sbjct: 833 PTAKTYTSLLHG-YHNIGNMSEVSALFEEMVAK 864



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/565 (28%), Positives = 289/565 (51%), Gaps = 11/565 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+    + +I+    +  +M   G+  +  ++ +++N   + G  E+AL++   + E G
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P  + Y+ +++        +    +   MK+  + P V TY++++  LC+   + G  
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +L EM   G  P+AV YTT++++  K G+VEE+R +  R         V  YN+LI G 
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++EEA   L EM++R + PN  TY   I      G +E +     +M   G  PN+
Sbjct: 497 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 556

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+L++G+   G   EA  ++  ++    L +V  YS LIHGL  NG M EA  +  +
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ++E    PN  TY++LI G  K GN+  ASQ+   M   G +P++V Y  ++  LC+   
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +L + +      PN VT+   + G C       A +LL++M      P+   YN 
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +L+   +  + ++A +L  E+ + G   + V++NT++ G C++G + EA  LL +M+ + 
Sbjct: 737 ILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQ 533
              + +T+  +I   CK G +  A +L   ++   E N  P   +YTSLL G  N G M 
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ---ERNVMPTAKTYTSLLHGYHNIGNMS 852

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
           E     ++M+ +GI P+  T+ V++
Sbjct: 853 EVSALFEEMVAKGIEPDKMTYYVMI 877



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/552 (29%), Positives = 269/552 (48%), Gaps = 11/552 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +MK   ++ +   +  +IN   R G  +    +   +   GLKP   +Y  ++ A  
Sbjct: 403 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 462

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      I   M+  G+ P+VF YN L+   CK  R++ A   L+EM  +   P+A 
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y   +    K G++E A       L+      V +Y ALI G CKE  + EAF +   +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R +  +V TYS +I  L   G +  + GI  ++  +G  PN  ++ SL+ G    G  
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +AS L   M  +G  P++V Y+ LI GLC  G ++ A ++   +E     PN  TY+A+
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAM 702

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG+ K+ N   A Q+   M+  G  P+   Y  ++   C+   F +A  L ++M  E  
Sbjct: 703 VDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM-LEKG 761

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +TV+FNT I+G C  G++  A  LL++M + + +PN  TY  L+D   +   + EA  
Sbjct: 762 FASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKR 821

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+++  +     TY ++LHG    G + E   L  +M+ +G + D +T+ ++I AYC
Sbjct: 822 LWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYC 881

Query: 492 KQGKVNNAIQLLDRIRGGGE-----WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           ++G V  A +L D I   G      +   + + + +  G   +G M EA   L+ M+  G
Sbjct: 882 REGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 941

Query: 547 ICPNFATWNVLV 558
              N  +   LV
Sbjct: 942 WVSNTTSLGDLV 953



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/565 (25%), Positives = 253/565 (44%), Gaps = 84/565 (14%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           +F  +++SYR++G   +A+ +F   + F  +P++                          
Sbjct: 156 IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSL-------------------------- 189

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
                     + N LL  L K N+V+  +K+   M      PD  +YT ++S+ CK+G V
Sbjct: 190 ---------LSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNV 240

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           ++A+ + +  G              K   ++EA  L   MVD+G+ P++ TY  +I+  C
Sbjct: 241 KDAKRVLLEMGE-------------KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 287

Query: 212 ----------------DV-------------------GNVETSLGILGQMFVRGCNPNIH 236
                           DV                   G++E +  I  +M   G   N+ 
Sbjct: 288 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 347

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
            + +LL G    G+  +A ++   M+ +G  P+   YS LI G C   +M  A  +  +M
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 407

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           ++    P V TYS +I+G  + GNL G + I   M+ NG  PN V YT ++    +    
Sbjct: 408 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 467

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            ++  ++E+M  +   P+   +N+ I G C   R++ A   L +M +    PN  TY   
Sbjct: 468 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAF 527

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DG  +   ++ A     E+  CG+  N+  Y  ++ G C+ G V EAF +   +L    
Sbjct: 528 IDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRV 587

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D  T++++I+   + GK++ A  +   ++  G   P+  +Y SL+ G C  G + +A 
Sbjct: 588 LQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL-PNAFTYNSLISGSCKQGNVDKAS 646

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
             L++M  +GI P+  T+N+L+  L
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGL 671



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 173/354 (48%), Gaps = 23/354 (6%)

Query: 211 CDVGNVETSLGILGQMF--VRGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           C + N ++ L +LG +    R CN  PN   F  L+  Y   G   EA +++       F
Sbjct: 126 CIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEF 185

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++++ ++L+  L     ++    V   M  +   P+V TY+ +I    K GN+  A +
Sbjct: 186 RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKR 245

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M                       +  +A  L   M  +   P+  T++  I G C
Sbjct: 246 VLLEMGEKA------------------RLLDEAIELKRSMVDKGLVPDLYTYDILINGFC 287

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R   A  +L +M      P   TYN L+DG +R   +++AF +  E+  CGI+ N++
Sbjct: 288 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 347

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            +NT+L+GVC+AG + +A +++ +M+ +G + D+ T++++I  +C+   +  A +LLD +
Sbjct: 348 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 407

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +   +  P +++Y+ ++ G+C  G +Q     L++M+  G+ PN   +  L+ +
Sbjct: 408 K-KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 157/361 (43%), Gaps = 47/361 (13%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +++ +G+  +   + S+I+   + G  ++A ++   +   G+ P +  YN ++D L 
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     ++ +++  G+ PN  TY  ++   CK+     A++LL EM  +G  PDA 
Sbjct: 673 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 732

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I++  CK  + E+A +L        F S VS +N LI G CK  K++EA  LL EM
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEM 791

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++   PN +TY+++I   C  G +  +  +  +M  R   P   ++TSLL GY   G  
Sbjct: 792 IEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNM 851

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS-------------------------- 285
            E S L+  M+ +G  P+ + Y  +I   C  G+                          
Sbjct: 852 SEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGL 911

Query: 286 ---------------MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
                          MDEA  V   M +     N T+   L+DG     N   +  +  +
Sbjct: 912 PTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQ 971

Query: 331 M 331
           M
Sbjct: 972 M 972



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 92/226 (40%), Gaps = 24/226 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   +  ++    +LL++M  +    +   + S+I+   + G+  +A +++  ++E  
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PT K Y  +L         S ++ ++  M   G+EP+  TY +++ A C+   V  A 
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL  E+  KG                          +   F  G+   + +  G      
Sbjct: 891 KLKDEILVKGMP------------------------MKSGFRLGLPTCSVIARGFQIAGN 926

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           ++EA  +L  MV  G   N  +   ++    +  N E S  +L QM
Sbjct: 927 MDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 285/590 (48%), Gaps = 42/590 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E +  + ++ +M   G   SE    ++++  R+ G    A  +  ++++FG+ P++ +YN
Sbjct: 300 EFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN 359

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD------------ 117
            +++++  + +      +++NM   G+ PN  TY+IL+ + CK  ++D            
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419

Query: 118 -----------------------GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
                                   A  L  EM   G  P+ V YT+++S  CK G++  A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479

Query: 155 RELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L     G G+S     + ALI+GLC  +++ EA  L  EMV+  + PN +TY+ +I  
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  GN   +  +L +M  +G  P+ +++  L+ G    GR  EA +  N +  E    N
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            + +S L+HG C  G +D+A+    +M       ++  YS LI G  +  +      +  
Sbjct: 600 EMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLK 659

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M   G  P+ V YT M+    +      A  L + M  E C PN VT+   I GLC  G
Sbjct: 660 QMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIG 719

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +D A  L  +M     LPN  TY   LD L     +++A +L  ++   G   N VTYN
Sbjct: 720 LMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYN 778

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G C+ G + EA ++L  M+  G   D I+++ IIY YC++G +  AI+L + +   
Sbjct: 779 ILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 838

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           G  NPD ++Y  L++G C +G + +AF     M+  G+ PN AT+N L+ 
Sbjct: 839 G-VNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/535 (30%), Positives = 271/535 (50%), Gaps = 13/535 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  + +  ++D  + L   M  +G+  ++  +  +I+S+ + G  + AL    ++ E G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K TV  Y+ ++       +      ++  M  +G++PNV  Y  L+   CK   +  A+
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
           +L  EM  KG +P+  ++T ++S +C   ++ EA +L   FG  V          YN LI
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL---FGEMVEWNVIPNEVTYNVLI 537

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G CKE     AF LL EMV++G+ P+  TY  +IS LC  G V  +   +  +      
Sbjct: 538 EGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQK 597

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N   F++LL GY   GR  +A D    M+  G   ++V YS LI+G+         + +
Sbjct: 598 LNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDL 657

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QM +    P+   Y+ +ID  AKAGNL  A  +W+ M+S GC PNVV YT ++  LC+
Sbjct: 658 LKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCK 717

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             +  +A  L  +M   N  PN  T+  F+  L   G ++ A++L D + +   L N  T
Sbjct: 718 IGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVT 776

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+ G  ++ R++EA E++  +   GI  + ++Y+TI++  CR G + EA +L   ML
Sbjct: 777 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 836

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             G   D + +N +IY  C  G++  A +L D +   G   P+  +Y SL+ G C
Sbjct: 837 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG-VKPNRATYNSLIHGTC 890



 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 283/575 (49%), Gaps = 25/575 (4%)

Query: 30  EGVFISVINSYRRVGLAE------------------QALKMFYRIREFGLKPTVKIYNHI 71
           EG+F S ++SYR+   +                     L +   + + G+ P ++  + +
Sbjct: 127 EGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGV 186

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L+ L+   +F M   ++  +   G+ P+V+ Y  ++++LC+      A +++  M + GC
Sbjct: 187 LNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGC 246

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFW 186
                +Y   +  +CK  +V EA E+          + V  Y  L+ GLCK  + E    
Sbjct: 247 DLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEE 306

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           ++ EM++ G  P+    S ++  L   GN+ ++  ++ ++   G  P++  + +L+    
Sbjct: 307 MMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMC 366

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+  EA  L+N M  +G  PN V YS LI   C  G +D A+    +M E      V 
Sbjct: 367 KDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY 426

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            YS+LI G  K G L  A  +++ MI+NG  PNVV YT ++   C+    H A  L  +M
Sbjct: 427 PYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   PNT TF   I GLC   R+  A KL  +M ++  +PN  TYN L++G  +    
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNT 546

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
             AFEL+ E+ + G+  +  TY  ++ G+C  G V EA + +  +  E  KL+ + F+ +
Sbjct: 547 VRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSAL 606

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           ++ YCK+G++++A+     + G G    D++ Y+ L++GI      +     L++M ++G
Sbjct: 607 LHGYCKEGRLDDALDACREMLGRG-VAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + P+   +  ++ +  +  G+L   + L DIM ++
Sbjct: 666 LRPDNVLYTTMIDA-NAKAGNLKMAFGLWDIMVSE 699



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 172/667 (25%), Positives = 278/667 (41%), Gaps = 145/667 (21%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   R+     AL +F  I   GL+P V +Y  ++ +L     F     +   M+  G
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            + +V TYN+ ++ LCKN RV  A ++   +  KG   D  +Y T+V  +CK+ + E   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 156 EL--------------------------------------AMRFGSGVS--VYNALINGL 175
           E+                                        +FG   S  VYNALIN +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG----------- 224
           CK+ K++EA  L   M  +G+ PN +TYS +I S C  G ++ +L  LG           
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATV 425

Query: 225 ------------------------QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
                                   +M   G  PN+  +TSL+ GY   G  H A  L++ 
Sbjct: 426 YPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHE 485

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  PN   ++ LI GLC    M EA  +  +M E +  PN  TY+ LI+G  K GN
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
            + A ++ + M+  G  P+   Y  ++  LC      +A   +  +  E    N + F+ 
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605

Query: 381 FIKGLCGCGRVDWAM-----------------------------------KLLDQMKQYE 405
            + G C  GR+D A+                                    LL QM    
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P+   Y  ++D   +   +K AF L   +   G   N+VTY  +++G+C+ G++ +A 
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE 725

Query: 466 QL----------------------------------LGKMLIEGTKLDAITFNIIIYAYC 491
            L                                  L  +L+EG   + +T+NI+I  +C
Sbjct: 726 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFC 785

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G++  A ++L  +   G  +PD ISY+++++  C  G ++EA    + MLN G+ P+ 
Sbjct: 786 KLGRIQEAAEVLVNMIDSG-ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 844

Query: 552 ATWNVLV 558
             +N L+
Sbjct: 845 VAYNFLI 851


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 285/542 (52%), Gaps = 7/542 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+  +   +  +IN + R      AL +  ++ + G
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   + +L+      R S    +   M   G +PN  T+N L+  L  +N+   A 
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  KGC PD V+Y  +V+ +CK G  + A  L       +   GV +YN +I+GL
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++A  L  EM  +GI PNV+TYS++IS LC+ G    +  +L  M  R  NP++
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  EA  L++ M++    P++V YS+LI+G C +  +DEA  +   
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P+V TY+ LI GF K   +    +++  M   G   N V Y  +++ L Q   
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +  PPN +T+NT + GLC  G+++ AM + + +++ +  P I TYN 
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ ++V YNT++ G CR G   EA  L  +M  +G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           T  ++  +N +I A  + G    + +L+  +R  G +  D  S   L+  + + G + ++
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG-FAGD-ASTIGLVTNMLHDGRLDKS 624

Query: 536 FI 537
           F+
Sbjct: 625 FL 626



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 280/531 (52%), Gaps = 16/531 (3%)

Query: 42  RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           R GL+E     A+ +F  + +    P++  ++ +L A+   N+F ++  +   M+  G+ 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            N +TY+IL+   C+ +++  A  +L +M   G  P+ V+ +++++  C   ++ EA  L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 158 AMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             +     +      +N LI+GL   +K  EA  L+  MV +G  P+++TY  +++ LC 
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G+ + +  +L +M      P +  + +++ G        +A +L+  M  +G  PNVV 
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS+LI  LC+ G   +A  +   M E    P+V T+SALID F K G L+ A ++++ M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                P++V Y+ ++   C ++   +A  + E M  ++C P+ VT+NT IKG C   RV+
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             M++  +M Q   + N  TYN L+ GL +      A E+  E+   G+  NI+TYNT+L
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 453 HGVCRAGMVVEA---FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            G+C+ G + +A   F+ L +  +E T     T+NI+I   CK GKV +   L   +   
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           G   PD+++Y +++ G C  G  +EA    ++M  +G  PN   +N L+R+
Sbjct: 531 G-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 256/512 (50%), Gaps = 14/512 (2%)

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN---- 114
           F +  T K + H   +L+     + ++P +S   R        +Y+   K L +N     
Sbjct: 5   FAIASTAKRFVH--RSLVVRGNAATVSPSFSFFWRRAFSGKT-SYDYREK-LSRNGLSEL 60

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYN 169
           ++D A  L  EM      P  + ++ ++S+I K+ + +    L  +  + G+      Y+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            LIN  C+  ++  A  +L +M+  G +PN++T S++++  C    +  ++ ++ QMFV 
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN  +F +L+ G  L  +  EA  L +RM+ +G  P++V Y  +++GLC  G  D A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
            ++  +ME+    P V  Y+ +IDG  K  ++  A  ++  M + G  PNVV Y+ ++  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC    +  A  L+  M      P+  TF+  I      G++  A KL D+M +    P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TY+ L++G    +R+ EA ++   +       ++VTYNT++ G C+   V E  ++  
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M   G   + +T+NI+I    + G  + A ++   +   G   P+I++Y +LL G+C +
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKN 479

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G +++A +  + +    + P   T+N+++  +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 210/397 (52%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           ++ L++ + K +K +    L  +M + GI  N  TYS +I+  C    +  +L +LG+M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  PNI + +SLL GY    R  EA  L ++M   G+ PN V ++TLIHGL  +    
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA+++  +M    C P++ TY  +++G  K G+   A  + N+M      P V+ Y  ++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ T++ L+D  ++  ++ EA +L  E+ K  I  +IVTY+++++G C    + EA Q+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D +T+N +I  +CK  +V   +++   +   G    + ++Y  L+ G+ 
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLF 442

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +G    A    ++M+++G+ PN  T+N L+  L  N
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 201/390 (51%), Gaps = 2/390 (0%)

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NGL  E K+++A  L  EMV     P++I +S ++S++  +   +  + +  QM   G  
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N ++++ L+  +    +   A  +  +M++ G+ PN+V  S+L++G C +  + EAV++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QM      PN  T++ LI G         A  + +RM++ GC P++V Y  +V  LC+
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A +L+ KM      P  + +NT I GLC    +D A+ L  +M+     PN+ T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+  L    R  +A  L++++ +  I  ++ T++ ++    + G +VEA +L  +M+
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
                   +T++ +I  +C   +++ A Q+ + +     + PD+++Y +L+ G C    +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRV 412

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +E     ++M   G+  N  T+N+L++ LF
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLF 442


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/537 (30%), Positives = 281/537 (52%), Gaps = 6/537 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I +Y +     +  + F  +R+ G   ++   N +L A++      +   +Y + 
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            + G   NV+T NI++ ALCK+ ++D     L EM  KG   D V+Y T+V++ C+ G V
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA  L           G+  YNALINGLCKE   E A  +L EM+  G+ PN  T++ +
Sbjct: 276 SEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPM 335

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C   +V  +  +  +M  RG  P++ SF+S++  +   G    A   + +M   G 
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+ V Y+ LI+G C N  +  A+ +  +M E  C  +V TY+ L++G  +   L  A +
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M+  G  P+    T ++   C++    +A SL E M   +  P+ VT+NT + G C
Sbjct: 456 LFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFC 515

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G ++ A +L   M   E  P+  +++ L++G   +  V EAF L  E+++ GI+  +V
Sbjct: 516 KVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLV 575

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T NTI+ G  RAG + +A   L  M+ EG   D IT+N +I ++ K+   + A  L++ +
Sbjct: 576 TCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNM 635

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              G   P++++Y ++L G    G MQEA + L KM+++GI P+ +T+  L+    S
Sbjct: 636 EERGLL-PNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVS 691



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 242/480 (50%), Gaps = 5/480 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  ++D V   L +M+ +GV      + +++N+Y R GL  +A  +   +   G
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN +++ L  E  +     +   M   G+ PN  T+N +L   C+   V  A 
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
           ++  EM  +G  PD +S+++IV    + G++  A     +  G G+     +Y  LING 
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +  A  +  EMV+RG   +V+TY+T+++ LC    ++ +  +  +M  RG  P+ 
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++ T+L+ GY   G   +A  L+  M      P+VV Y+TL+ G C  G M++A  + Y 
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYD 529

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+  ++S LI+GF   G +  A ++W+ M   G  P +V    ++K   +   
Sbjct: 530 MISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN 589

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A+  +  M  E  PP+ +T+NT I         D A  L++ M++   LPN+ TYN 
Sbjct: 590 LSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNA 649

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +L G  R  R++EA  ++ ++   GI  +  TY ++++G      + EAF++  +ML  G
Sbjct: 650 ILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 255/538 (47%), Gaps = 41/538 (7%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            Q ++  G   S     +++ +  +VG  + A K++    + G    V   N +++AL  
Sbjct: 177 FQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCK 236

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           + +   +    S M+  G+  ++ TYN L+ A C+   V  A+ L+  M  KG  P   +
Sbjct: 237 DGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFT 296

Query: 138 YTTIVSSICKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  +++ +CK G  E A R L    G G+    + +N ++   C++  + EA  +  EM+
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEML 356

Query: 193 DRGIDPNVITYSTI-----------------------------------ISSLCDVGNVE 217
            RG+ P++I++S+I                                   I+  C   +V 
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  +M  RGC  ++ ++ +LL G   G    +A +L+  M+  G  P+    +TLI
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLI 476

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           HG C +G+M +A+S+   M   S  P+V TY+ L+DGF K G +  A ++W  MIS    
Sbjct: 477 HGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF 536

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ ++++ ++   C   +  +A  L ++M  +   P  VT NT IKG    G +  A   
Sbjct: 537 PSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDF 596

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+ M      P+  TYN L++  ++      AF L+  +E+ G+  N+VTYN IL G  R
Sbjct: 597 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 656

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            G + EA  +L KM+ +G   D  T+  +I  Y  +  +  A ++ D +   G + PD
Sbjct: 657 HGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG-FVPD 713



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/487 (23%), Positives = 226/487 (46%), Gaps = 18/487 (3%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN      L+  L ++ ++  A  LL+ +  K      VS+  ++ S+            
Sbjct: 97  PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKS----GVSHVEVIDSLISTSSSNLNSNQ 152

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEE---AFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                  V V++ LI    +  K+ E   AF LL +   RG   ++   + ++ ++  VG
Sbjct: 153 N------VVVFDLLIRTYVQARKLREGSEAFQLLRK---RGFCVSINACNALLGAIVKVG 203

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            V+ +  +       G   N+++   ++      G+        + M  +G   ++V Y+
Sbjct: 204 WVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYN 263

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TL++  C  G + EA  +   M      P + TY+ALI+G  K G+   A ++ + M+  
Sbjct: 264 TLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGV 323

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PN   +  M+   C+     +A  +  +M      P+ ++F++ +      G +  A
Sbjct: 324 GLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRA 383

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +   ++MK    +P+   Y  L++G  R + V  A ++  E+ + G  +++VTYNT+L+G
Sbjct: 384 LAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNG 443

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +CR  M+ +A +L  +M+  G   D  T   +I+ YCK G +  A+ L + +       P
Sbjct: 444 LCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRS-LKP 502

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           D+++Y +L+ G C  G M++A      M++  I P++ ++++L+   F +LG +   + L
Sbjct: 503 DVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILING-FCSLGLVSEAFRL 561

Query: 575 DDIMANK 581
            D M  K
Sbjct: 562 WDEMKEK 568


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 168/555 (30%), Positives = 288/555 (51%), Gaps = 31/555 (5%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++I SY  +     A          G  P+V  YN +L AL ++          S+M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G+ PNV+TYNIL++ALC   R++ A  ++ +M   GCAP+AV+Y T+V++ C+ G+++
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 153 EARELA--MR----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            A  +   MR        +  +N+++NGLCK  ++E A  +  EMV  G+ P+V++Y+T+
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +S  C VG +  SL +  +M  RG  P++ +FTSL+      G   +A  L  +M   G 
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N V ++ LI G C  G +D+A+    +M +    P+V  Y+ALI+G+ K G +  A +
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M +    P+VV Y+ ++   C+      A  L +KM  +   P+ +T+++ I+GLC
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R++ A +L + M Q    P+  TY  L+DG  +   V++A  L  E+ + G+  ++V
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN---------------IIIYAYC 491
           TY+ +++G+ ++    EA +LL K+  E    D I ++                ++  +C
Sbjct: 505 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFC 564

Query: 492 KQGKVNNAIQ----LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            +G +  A +    +LDR      W  D   Y+ L+ G C  G +++A  + ++ML  G 
Sbjct: 565 MKGLMKEADKVYQSMLDR-----NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGF 619

Query: 548 CPNFATWNVLVRSLF 562
            PN  +   LVR LF
Sbjct: 620 SPNSTSTISLVRGLF 634



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 269/555 (48%), Gaps = 49/555 (8%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +   +  L  M   GV+ +   +  ++ +    G  E+A+ +   +R  G  P    YN 
Sbjct: 133 LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNT 192

Query: 71  ILDALLAENRFSMINPIYSNMKRDG-MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           ++ A            + S M+ +G  +PN+ T+N ++  LCK  R++GA K+  EM  +
Sbjct: 193 LVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE 252

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G APD VSY T++S  CK+G                          C    + E+  +  
Sbjct: 253 GLAPDVVSYNTLLSGYCKVG--------------------------C----LHESLAVFS 282

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  RG+ P+V+T++++I + C  GN+E ++ ++ QM  RG   N  +FT+L+ G+   G
Sbjct: 283 EMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG 342

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +A      M + G  P+VV Y+ LI+G C  G MD A  +  +ME     P+V TYS
Sbjct: 343 FLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYS 402

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +I G+ K GNL  A Q+  +M+  G  P+ + Y+ +++ LC+    + A  L E M   
Sbjct: 403 TIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL 462

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+  T+ T I G C  G V+ A+ L D+M +   LP++ TY+ L++GL +  R KEA
Sbjct: 463 GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 522

Query: 430 FELVTEIEK---------------CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             L+ ++                 C  +    +   +L G C  G++ EA ++   ML  
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 582

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             KLD   ++I+I+ +C+ G V  A+    ++   G ++P+  S  SL+ G+   G + E
Sbjct: 583 NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG-FSPNSTSTISLVRGLFEEGMVVE 641

Query: 535 AFIYLQKMLNEGICP 549
           A   +Q +L    CP
Sbjct: 642 ADNAIQDLLT--CCP 654



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 264/548 (48%), Gaps = 37/548 (6%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDALLAE 78
            M+  G + +   + +++ ++ R G  + A ++   +RE G  KP +  +N +++ L   
Sbjct: 177 DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 236

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R      ++  M R+G+ P+V +YN LL   CK   +  +  +  EM  +G  PD V++
Sbjct: 237 GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 296

Query: 139 TTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           T+++ + CK G +E+A       RE  +R       + ALI+G CK+  +++A   + EM
Sbjct: 297 TSLIHATCKAGNLEQAVALVAQMRERGLRMNE--VTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              GI P+V+ Y+ +I+  C +G ++ +  ++ +M  +   P++ ++++++ GY   G  
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L  +M+++G LP+ + YS+LI GLC    +++A  +   M +    P+  TY+ L
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 474

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K GN+  A  + + MI  G  P+VV Y+ ++  L ++    +AH L+ K+  E+ 
Sbjct: 475 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 534

Query: 372 PPNTVTFNTF---------------IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            P+ + ++                 +KG C  G +  A K+   M       + + Y+ L
Sbjct: 535 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 594

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  R   V++A     ++ + G   N  +  +++ G+   GMVVEA   +  +L    
Sbjct: 595 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE-W---NPDIISYTSLLWGICNSGGM 532
             DA     +I    K+G        +D  +  GE W   +   + Y + +  IC+ G  
Sbjct: 655 LADAEASKALIDLNRKEG--------MDYFQAQGEIWYSESSPSVEYWNYMMTICHFGVW 706

Query: 533 QEAFIYLQ 540
              F  L+
Sbjct: 707 STYFSMLR 714



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 206/444 (46%), Gaps = 25/444 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +   ++G + +  +M  EG++     + ++++ Y +VG   ++L +F  + + G
Sbjct: 229 MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 288

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +  ++ A            + + M+  G+  N  T+  L+   CK   +D A 
Sbjct: 289 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 348

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
             + EM   G  P  V Y  +++  CKLG+++ AREL     A R    V  Y+ +I+G 
Sbjct: 349 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 408

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   ++ AF L  +M+ +G+ P+ ITYS++I  LC+   +  +  +   M   G  P+ 
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G+   G   +A  L + MIR+G LP+VV YS LI+GL  +    EA  + ++
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+   Y AL+   +KA                    +VVA   ++K  C   +
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAE-----------------FKSVVA---LLKGFCMKGL 568

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  + + M   N   +   ++  I G C  G V  A+    QM +    PN T+   
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 628

Query: 416 LLDGLLRVNRVKEAFELVTEIEKC 439
           L+ GL     V EA   + ++  C
Sbjct: 629 LVRGLFEEGMVVEADNAIQDLLTC 652


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/574 (29%), Positives = 281/574 (48%), Gaps = 44/574 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL- 75
           L+ +M   G   +E     +++  R+ G  + A  +  ++  FG  P + +YN +++AL 
Sbjct: 310 LMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALC 369

Query: 76  ----------LAENRFSMINPI------------------------YSNMKRDGMEPNVF 101
                     L +N  SM  P+                        +  M  DG+   ++
Sbjct: 370 KGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIY 429

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
            YN L+   CK   +  A  L  +M N+G  P A ++TT++S  CK  QVE+A    RE+
Sbjct: 430 PYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM 489

Query: 158 AMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             +     V  + ALI GLC  +++ EA  L  EMV+R I P  +TY+ +I   C   N+
Sbjct: 490 NEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNM 549

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +L  M   G  P+ +++  L+ G    GR   A D  + + ++    N + YS L
Sbjct: 550 DKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSAL 609

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +HG C  G + EA+S S +M +     ++  ++ LIDG  K  ++     +  +M   G 
Sbjct: 610 LHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGL 669

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ V YT M+    +   F ++   ++ M  E C PN VT+  F+ GLC  G +D A  
Sbjct: 670 RPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGH 729

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L ++M      PN  TY   LD L +   +KEA +L  E+ K G+  N  TYN ++ G C
Sbjct: 730 LFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFC 788

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPD 515
           + G ++EA ++L +M   G   D IT++ IIY +C+ G V  A++L D  +R G E  PD
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVE--PD 846

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            +++  L++G C +G + +AF     ML+ G+ P
Sbjct: 847 SVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKP 880



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 279/570 (48%), Gaps = 14/570 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D  + L + M    +  ++  +  +I+S+ + G+ + A   F R+ E G
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ T+  YN +++        S    +Y+ M  +G+EP   T+  L+   CK+ +V+ A+
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAF 483

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           KL  EM  K  AP   ++T ++  +C   ++ EA +L       +       YN +I G 
Sbjct: 484 KLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGY 543

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK H +++AF LL +M+  G+ P+  TY  +IS LC  G V  +   +  +  +    N 
Sbjct: 544 CKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNE 603

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +++LL GY   GR  EA      MI+ G   ++V ++ LI G      M     +  +
Sbjct: 604 MCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKK 663

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+++ID ++K G+   + +  + M++  C PNVV YT  +  LC+   
Sbjct: 664 MYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGE 723

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L EKM   N  PN+VT+  F+  L   G +  A  L  +M +   L N  TYN 
Sbjct: 724 IDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNI 782

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  ++ R+ EA ++++E+ + GI  + +TY+TI++  CR+G V  A +L   ML +G
Sbjct: 783 LIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG 842

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN------- 528
            + D++ FN++IY  C  G ++ A +L + +   G     I+       G+CN       
Sbjct: 843 VEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGC 902

Query: 529 -SGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            +G +  A      ML   +  +   W  L
Sbjct: 903 VTGEVDTALRLYHSMLTRAVKLSLEMWKCL 932



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 235/480 (48%), Gaps = 6/480 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +  +++  G++ +V TY  L+   C+  + D    L+ EM   G  P   + + +V  + 
Sbjct: 275 VRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLR 334

Query: 147 KLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G ++ A +L ++ G       + VYNALIN LCK   +++A  L   M    +  N +
Sbjct: 335 KKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDV 394

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TYS +I S C  G ++ +    G+M   G    I+ + SL+ G+   G    A  L+ +M
Sbjct: 395 TYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKM 454

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I EG  P    ++TLI G C +  +++A  +  +M E    P+V T++ALI G      +
Sbjct: 455 INEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEM 514

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             AS++++ M+     P  V Y  M++  C+ +   +A  L+E M      P+T T+   
Sbjct: 515 AEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPL 574

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC  GRV  A   +D + +     N   Y+ LL G     R+ EA     E+ + GI
Sbjct: 575 ISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGI 634

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            +++V +  ++ G  +   +   F LL KM  +G + D++ +  +I AY K+G    + +
Sbjct: 635 NMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGE 694

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            LD +    +  P++++YT+ + G+C  G +  A    +KML   I PN  T+   + SL
Sbjct: 695 CLD-LMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSL 753



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 224/466 (48%), Gaps = 6/466 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P V T + +L  L +  +    +++  E  N G  PD  + + ++ S+C+L     A+E 
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEK 240

Query: 158 AM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            +     RF   +  YN LI+GLCK   + EA  +   + ++G+  +V+TY T++   C 
Sbjct: 241 ILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCR 300

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           V   +  + ++ +M   G  P   + + L+ G    G    A DL  ++ R GFLPN+  
Sbjct: 301 VQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFV 360

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ LC    +D+A  +   M   + P N  TYS LID F K G L  A   + RMI
Sbjct: 361 YNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMI 420

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G    +  Y  ++   C+      A  L  KM  E   P   TF T I G C   +V+
Sbjct: 421 EDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVE 480

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A KL  +M + E  P++ T+  L+ GL   N + EA +L  E+ +  I+   VTYN ++
Sbjct: 481 KAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMI 540

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G C+A  + +AF+LL  ML  G   D  T+  +I   C  G+V+ A   +D +      
Sbjct: 541 EGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKN-L 599

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             + + Y++LL G C  G + EA     +M+  GI  +     VL+
Sbjct: 600 KLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 162/413 (39%), Gaps = 71/413 (17%)

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS-------MDEAV 290
           F  L+  YL   R  +A  +   M+    LP V   S +++GL             DE+V
Sbjct: 151 FDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESV 210

Query: 291 SVSYQ----------------------------MEENSCPPNVTTYSALIDGFAKAGNLL 322
           +   +                            ME N    ++ TY+ LI G  K G +L
Sbjct: 211 NAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVL 270

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A ++   +   G   +VV Y  +V   C+   F     L+ +M      P     +  +
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GL   G +D A  L+ ++ ++  LPN+  YN L++ L +   + +A  L   +    + 
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLG--------------------------------- 469
           LN VTY+ ++   C+ GM+  A    G                                 
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 470 --KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             KM+ EG +  A TF  +I  YCK  +V  A +L  R     E  P + ++T+L++G+C
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLY-REMNEKEIAPSVYTFTALIYGLC 509

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           ++  M EA     +M+   I P   T+NV++              +L+D++ N
Sbjct: 510 STNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHN 562



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 168/390 (43%), Gaps = 53/390 (13%)

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL---- 267
           ++ +  TS  IL    V+  N       SLL   LL G     SD   + + E FL    
Sbjct: 91  NMNHTTTSFAILVHALVQ--NKLFWPANSLLHTLLLRG-----SD--PKFVFEKFLESHK 141

Query: 268 ----PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
                + + +  L+H    N  + +AV V   M  N+  P V T SA+++G  +    + 
Sbjct: 142 QCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFIL 201

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
             ++++  ++ G  P+    + +++ LC+   F +A   I  M       + VT+N  I 
Sbjct: 202 VWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIH 261

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTY--------------------NE-------- 415
           GLC  G V  A+++   +++     ++ TY                    NE        
Sbjct: 262 GLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVP 321

Query: 416 -------LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
                  L+DGL +   +  A++LV ++ + G   N+  YN +++ +C+   + +A  L 
Sbjct: 322 TEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLY 381

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M      L+ +T++I+I ++CK+G ++ A     R+   G     I  Y SL+ G C 
Sbjct: 382 KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG-IRETIYPYNSLINGHCK 440

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            G +  A     KM+NEG+ P   T+  L+
Sbjct: 441 FGDLSAAEFLYTKMINEGLEPTATTFTTLI 470


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 268/520 (51%), Gaps = 6/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+  F R+      P   +++ +L A++    +     +++ ++  G+ P++ T+ IL
Sbjct: 37  DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRF 161
           +      +    A+ LL  +   G  P+ V++ TI++  C  G + +A +     LA  +
Sbjct: 97  INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y  LINGL K  +I+ A  LL EM    + PN++ YS +I  LC  G V  +LG
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  Q+  RG   +  ++ SL+ G    GR  E + L  +M+RE   P+   ++ LI  LC
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M +    P++ TY+AL++G+    N+  A +++NRM+  G  P+V+
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++   C+  M  +A  L +++  +N  P   ++N+ I GLC  GR+    KLLD+M
Sbjct: 337 NYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM 396

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                 P++ TYN L+D L +  R+ EA  ++  + K G++ NIVTYN ++ G C    V
Sbjct: 397 HGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNV 456

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  +  +M+  G + D + +N++I  YCK   V+ AI L   +R      PDI SY S
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN-LIPDIASYNS 515

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L+ G+CN G +      L +M + G  P+  T+N+L+ + 
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAF 555



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 279/563 (49%), Gaps = 8/563 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  Q++ +G+S S   F  +IN Y        A  +   I + G +P +  +N I++   
Sbjct: 77  LFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                        N+   G   + FTY  L+  L KN ++  A  LL EM      P+ V
Sbjct: 137 INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+ ++  +CK G V +A  L  + G          YN+LI+G C   + +E   LL +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V   +DP+  T++ +I +LC  G +  + G+L  M  RG  P+I ++ +L++GY      
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENV 316

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           HEA +L+NRM++ G  P+V+ Y+ LI G C    +DEA+ +  ++   +  P + +Y++L
Sbjct: 317 HEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL 376

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG   +G +    ++ + M  +   P+VV Y  ++  LC+     +A  ++  M  +  
Sbjct: 377 IDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+N  + G C    V+ A  + ++M +    P+I  YN L++G  +   V EA  
Sbjct: 437 KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIV 496

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+    +  +I +YN+++ G+C  G +    +LL +M   G   D IT+NI++ A+C
Sbjct: 497 LFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFC 556

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K    + AI L  +I   G W PD  +  +++  +C    ++ A   L+ +L  G  PN 
Sbjct: 557 KTQPFDKAISLFRQIV-EGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNV 614

Query: 552 ATWNVLVRSLFSNLGHLGPVYIL 574
            T+ +L+ +L  + G  G   +L
Sbjct: 615 QTYTILINALCKD-GSFGEAMLL 636



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 252/553 (45%), Gaps = 76/553 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  +I    +LLQ+M+   V  +  ++ ++I+   + G    AL +  +I E G
Sbjct: 166 LINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERG 225

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++D   +  R+  +  + + M R+ ++P+ +T+NIL+ ALCK  R+  A 
Sbjct: 226 ILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQ 285

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-------------------- 160
            +L  M  +G  PD V+Y  ++   C    V EAREL  R                    
Sbjct: 286 GVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGY 345

Query: 161 --------------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                                   ++ YN+LI+GLC   +I     LL EM      P+V
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY+ +I +LC  G +  +LG+L  M  +G  PNI ++ +++ GY L    + A D++NR
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M++ G  P+++ Y+ LI+G C    +DEA+ +  +M   +  P++ +Y++LIDG    G 
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +    ++ + M  +G SP+V+ Y  ++   C+   F +A SL  ++  E   P+  T + 
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHA 584

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            +  LC   ++  A   L  +  + C PN+ TY  L++ L                    
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINAL-------------------- 624

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
                          C+ G   EA  LL KM       DAITF III    ++ + + A 
Sbjct: 625 ---------------CKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAE 669

Query: 501 QLLDRIRGGGEWN 513
           +L + +   G  N
Sbjct: 670 KLREEMIARGLVN 682



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 199/418 (47%), Gaps = 36/418 (8%)

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +++A      MV     P    +  ++ ++  +G+  T++ +  Q+  +G +P+I
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC-------------- 281
            +FT L+  Y     T  A  L   +++ G+ PN+V ++T+I+G C              
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 282 ---------------------SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
                                 NG +  A+ +  +ME++S  PN+  YSALIDG  K G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  + +++   G   + V Y  ++   C    + +   L+ KM  EN  P+  TFN 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GR+  A  +L  M +    P+I TYN L++G      V EA EL   + K G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++ +++ YN ++ G C+  MV EA  L  ++  +       ++N +I   C  G++++  
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +LLD + G  +  PD+++Y  L+  +C  G + EA   L  M+ +G+ PN  T+N ++
Sbjct: 391 KLLDEMHGSAQP-PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 154/321 (47%), Gaps = 46/321 (14%)

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           H  C   ++D+AV+   +M     PP  + +  L+    + G+   A  ++ ++ S G S
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 338 PNVVAYTCMVKVLCQNNMFHQAH-----SLIEKMAFENCPPNTVTFNTFIKGLC------ 386
           P++  +T ++     N  FHQ+H     SL+  +      PN VTFNT I G C      
Sbjct: 88  PSIATFTILI-----NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIF 142

Query: 387 -----------------------------GCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
                                          G++  A+ LL +M++    PN+  Y+ L+
Sbjct: 143 KALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALI 202

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL +   V +A  L ++I + GI L+ VTYN+++ G C  G   E  QLL KM+ E   
Sbjct: 203 DGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD 262

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D  TFNI+I A CK+G++  A  +L  +   GE  PDI++Y +L+ G C+   + EA  
Sbjct: 263 PDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE-KPDIVTYNALMEGYCSRENVHEARE 321

Query: 538 YLQKMLNEGICPNFATWNVLV 558
              +M+  G+ P+   +NVL+
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLI 342


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 176/591 (29%), Positives = 296/591 (50%), Gaps = 62/591 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREF 59
           MIE      + D V+ LL ++++E     E  FI V  +Y +  L ++A+ +F+R + EF
Sbjct: 83  MIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEF 142

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIY-----SNMKRDGMEPNVFTYNILLKALCKNN 114
             K +VK +N +L+ ++ E  +      Y     SNM  + + PN  ++N+++KALCK  
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLSFNLVIKALCKLR 201

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
            VD A ++   M  + C PD  +Y T                              L++G
Sbjct: 202 FVDRAIEVFRGMPERKCLPDGYTYCT------------------------------LMDG 231

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCKE +I+EA  LL EM   G  P+ + Y+ +I  LC  G++     ++  MF++GC PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++ +L+ G  L G+  +A  L  RM+    +PN V Y TLI+GL       +AV +  
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            MEE     N   YS LI G  K G    A  +W +M   GC PN+V Y+ +V  LC+  
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             ++A  ++ +M    C PN  T+++ +KG    G  + A+++  +M +  C  N   Y+
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DGL  V RVKEA  + +++   GI+ + V Y++I+ G+C  G +  A +L  +ML +
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531

Query: 475 ---GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI----- 526
               ++ D +T+NI++   C Q  ++ A+ LL+ +   G  +PD+I+  + L  +     
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRG-CDPDVITCNTFLNTLSEKSN 590

Query: 527 -CNSGG--MQEAFIYLQK-------------MLNEGICPNFATWNVLVRSL 561
            C+ G   ++E  + L K             ML + + P  +TW ++VR +
Sbjct: 591 SCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREI 641



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 68/415 (16%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+ +   ++  G  P+  IYN ++D L  +   + +  +  NM   G  PN  TYN L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           +  LC   ++D A  LL  M +  C P+ V+Y T+++ + K  +  +A  L        +
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                +Y+ LI+GL KE K EEA  L  +M ++G  PN++ YS ++  LC  G    +  
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGY----------------------------------LL 247
           IL +M   GC PN ++++SL+KG+                                  L 
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478

Query: 248 G-GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM---EENSCPP 303
           G GR  EA  +W++M+  G  P+ VAYS++I GLC  GSMD A+ + ++M   EE    P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC------------------ 345
           +V TY+ L+DG     ++  A  + N M+  GC P+V+  TC                  
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVI--TCNTFLNTLSEKSNSCDKGR 596

Query: 346 -----MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
                +V  L +      A +++E M  +   P T T+   ++ +C   +++ A+
Sbjct: 597 SFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T S++I S  + G+ ++   +L ++ +        SF  + + Y       +A DL++RM
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138

Query: 262 IREGFLP-NVVAYSTLIHGLCSNGSMDEAVSV-SYQMEEN---SCPPNVTTYSALIDGFA 316
           + E     +V +++++++ + + G     +    Y +  N   +  PN  +++ +I    
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K   +  A +++  M    C P+   Y  ++  LC+     +A  L+++M  E C P+ V
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +N  I GLC  G +    KL+D M    C+PN  TYN L+ GL    ++ +A  L+  +
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
                  N VTY T+++G+ +     +A +LL  M   G  L+   ++++I    K+GK 
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A+ L  ++   G   P+I+ Y+ L+ G+C  G   EA   L +M+  G  PN  T++ 
Sbjct: 379 EEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437

Query: 557 LVRSLF 562
           L++  F
Sbjct: 438 LMKGFF 443


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 159/533 (29%), Positives = 282/533 (52%), Gaps = 7/533 (1%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            + D V  L +QM+  G+  +   +  +IN + R      AL +  ++ + G +P +   +
Sbjct: 710  KFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLS 769

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L+      R S    +   M   G +PN  T+N L+  L  +N+   A  L+  M  K
Sbjct: 770  SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 829

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLCKEHKIEEA 184
            GC PD V+Y  +V+ +CK G  + A  L   M  G    GV +YN +I+GLCK   +++A
Sbjct: 830  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L  EM  +GI PNV+TYS++IS LC+ G    +  +L  M  R  NP++ +F++L+  
Sbjct: 890  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            ++  G+  EA  L++ M++    P++V YS+LI+G C +  +DEA  +   M    C P+
Sbjct: 950  FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            V TY+ LI GF K   +    +++  M   G   N V Y  +++ L Q      A  + +
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 1069

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +M  +  PPN +T+NT + GLC  G+++ AM + + +++ +  P I TYN +++G+ +  
Sbjct: 1070 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 1129

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +V++ ++L   +   G++ ++V YNT++ G CR G   EA  L  +M  +GT  ++  +N
Sbjct: 1130 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 1189

Query: 485  IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
             +I A  + G    + +L+  +R  G +  D  S   L+  + + G + ++F+
Sbjct: 1190 TLIRARLRDGDREASAELIKEMRSCG-FAGD-ASTIGLVTNMLHDGRLDKSFL 1240



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 157/531 (29%), Positives = 280/531 (52%), Gaps = 16/531 (3%)

Query: 42   RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
            R GL+E     A+ +F  + +    P++  ++ +L A+   N+F ++  +   M+  G+ 
Sbjct: 668  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727

Query: 98   PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
             N +TY+IL+   C+ +++  A  +L +M   G  P+ V+ +++++  C   ++ EA  L
Sbjct: 728  HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787

Query: 158  AMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
              +     +      +N LI+GL   +K  EA  L+  MV +G  P+++TY  +++ LC 
Sbjct: 788  VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847

Query: 213  VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
             G+ + +  +L +M      P +  + +++ G        +A +L+  M  +G  PNVV 
Sbjct: 848  RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907

Query: 273  YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            YS+LI  LC+ G   +A  +   M E    P+V T+SALID F K G L+ A ++++ M+
Sbjct: 908  YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967

Query: 333  SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                 P++V Y+ ++   C ++   +A  + E M  ++C P+ VT+NT IKG C   RV+
Sbjct: 968  KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027

Query: 393  WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
              M++  +M Q   + N  TYN L+ GL +      A E+  E+   G+  NI+TYNT+L
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087

Query: 453  HGVCRAGMVVEA---FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
             G+C+ G + +A   F+ L +  +E T     T+NI+I   CK GKV +   L   +   
Sbjct: 1088 DGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144

Query: 510  GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            G   PD+++Y +++ G C  G  +EA    ++M  +G  PN   +N L+R+
Sbjct: 1145 G-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 1194



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 282/584 (48%), Gaps = 58/584 (9%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++N + R      A+ +  ++ E G KP +  YN I+D+L    R +     +  ++R 
Sbjct: 263 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 322

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ PNV TY  L+  LC ++R   A +LL +M  K   P+ ++Y+ ++ +  K G+V EA
Sbjct: 323 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 382

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +EL      M     +  Y++LINGLC   +I+EA  +   MV +G   +V++Y+T+I+ 
Sbjct: 383 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 442

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C    VE  + +  +M  RG   N  ++ +L++G+   G   +A + +++M   G  P+
Sbjct: 443 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 502

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +  Y+ L+ GLC NG +++A+ +   M++     ++ TY+ +I G  K G +  A  ++ 
Sbjct: 503 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 562

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT--------F 381
            +   G  P++V YT M+  LC   + H+  +L  KM  E    N  T +          
Sbjct: 563 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 622

Query: 382 IKGLCGCG--------------------------------------------RVDWAMKL 397
           IK +  CG                                            ++D A+ L
Sbjct: 623 IKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVAL 682

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M +    P+I  +++LL  + ++N+      L  +++  GI  N  TY+ +++  CR
Sbjct: 683 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCR 742

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
              +  A  +LGKM+  G + + +T + ++  YC   +++ A+ L+D++   G + P+ +
Sbjct: 743 RSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG-YQPNTV 801

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ +L+ G+       EA   + +M+ +G  P+  T+ V+V  L
Sbjct: 802 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 302/618 (48%), Gaps = 58/618 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++      ++++ +G+  +   + +++N          A ++   + +  
Sbjct: 299 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 358

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ +LDA +   +      ++  M R  ++P++ TY+ L+  LC ++R+D A 
Sbjct: 359 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 418

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++   M +KGC  D VSY T+++  CK  +VE+     RE++ R   S    YN LI G 
Sbjct: 419 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 478

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +++A     +M   GI P++ TY+ ++  LCD G +E +L I   M  R  + +I
Sbjct: 479 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 538

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T++++G    G+  EA  L+  +  +G  P++V Y+T++ GLC+ G + E  ++  +
Sbjct: 539 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 598

Query: 296 MEE-----NSC---PPNVTTYSALID-----GFA-------------KAGNLL------- 322
           M++     N C     ++T  + LI      G+A             KA +LL       
Sbjct: 599 MKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKT 658

Query: 323 -------------------GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
                               A  ++  M+ +   P+++ ++ ++  + + N F    SL 
Sbjct: 659 SYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLG 718

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E+M     P N  T++  I   C   ++  A+ +L +M +    PNI T + LL+G    
Sbjct: 719 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 778

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R+ EA  LV ++   G Q N VT+NT++HG+       EA  L+ +M+ +G + D +T+
Sbjct: 779 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 838

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            +++   CK+G  + A  LL+++   G+  P ++ Y +++ G+C    M +A    ++M 
Sbjct: 839 GVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 897

Query: 544 NEGICPNFATWNVLVRSL 561
            +GI PN  T++ L+  L
Sbjct: 898 TKGIRPNVVTYSSLISCL 915



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 282/609 (46%), Gaps = 58/609 (9%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            E++    + + M+   +      + +VI    + G  E+A  +F  +   GLKP +  Y 
Sbjct: 518  ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 577

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTY---NILLKA----------------- 109
             ++  L  +     +  +Y+ MK++G+  N  T    +I L A                 
Sbjct: 578  TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLK 637

Query: 110  -----LCKNN---------------------------RVDGAYKLLVEMGNKGCAPDAVS 137
                 +CK                             ++D A  L  EM      P  + 
Sbjct: 638  DIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIE 697

Query: 138  YTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEMV 192
            ++ ++S+I K+ + +    L  +  + G+      Y+ LIN  C+  ++  A  +L +M+
Sbjct: 698  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757

Query: 193  DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
              G +PN++T S++++  C    +  ++ ++ QMFV G  PN  +F +L+ G  L  +  
Sbjct: 758  KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817

Query: 253  EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            EA  L +RM+ +G  P++V Y  +++GLC  G  D A ++  +ME+    P V  Y+ +I
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 313  DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            DG  K  ++  A  ++  M + G  PNVV Y+ ++  LC    +  A  L+  M      
Sbjct: 878  DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 937

Query: 373  PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            P+  TF+  I      G++  A KL D+M +    P+I TY+ L++G    +R+ EA ++
Sbjct: 938  PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997

Query: 433  VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
               +       ++VTYNT++ G C+   V E  ++  +M   G   + +T+NI+I    +
Sbjct: 998  FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 1057

Query: 493  QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
             G  + A ++   +   G   P+I++Y +LL G+C +G +++A +  + +    + P   
Sbjct: 1058 AGDCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 1116

Query: 553  TWNVLVRSL 561
            T+N+++  +
Sbjct: 1117 TYNIMIEGM 1125



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/608 (23%), Positives = 286/608 (47%), Gaps = 59/608 (9%)

Query: 12   DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
            DG++ L ++M   G+  +   + ++I  + + G  ++A + F ++  FG+ P +  YN +
Sbjct: 451  DGMK-LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509

Query: 72   LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
            L  L           I+ +M++  M+ ++ TY  +++ +CK  +V+ A+ L   +  KG 
Sbjct: 510  LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 569

Query: 132  APDAVSYTTIVSSICKLGQVEEARELAMRF------------------------------ 161
             PD V+YTT++S +C  G + E   L  +                               
Sbjct: 570  KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSC 629

Query: 162  GSGVSVYNALINGLCK---------------------------EHKIEEAFWLLCEMVDR 194
            G   S+   + +G+CK                           E K+++A  L  EMV  
Sbjct: 630  GYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKS 689

Query: 195  GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
               P++I +S ++S++  +   +  + +  QM   G   N ++++ L+  +    +   A
Sbjct: 690  RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 749

Query: 255  SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
              +  +M++ G+ PN+V  S+L++G C +  + EAV++  QM      PN  T++ LI G
Sbjct: 750  LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 809

Query: 315  FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
                     A  + +RM++ GC P++V Y  +V  LC+      A +L+ KM      P 
Sbjct: 810  LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPG 869

Query: 375  TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             + +NT I GLC    +D A+ L  +M+     PN+ TY+ L+  L    R  +A  L++
Sbjct: 870  VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 929

Query: 435  EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            ++ +  I  ++ T++ ++    + G +VEA +L  +M+        +T++ +I  +C   
Sbjct: 930  DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 989

Query: 495  KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            +++ A Q+ + +     + PD+++Y +L+ G C    ++E     ++M   G+  N  T+
Sbjct: 990  RLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 1048

Query: 555  NVLVRSLF 562
            N+L++ LF
Sbjct: 1049 NILIQGLF 1056



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/617 (24%), Positives = 275/617 (44%), Gaps = 78/617 (12%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             ID    +   M  +G       + ++IN + +    E  +K+F  + + GL      YN
Sbjct: 413  RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 472

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++               +S M   G+ P+++TYNILL  LC N  ++ A  +  +M  +
Sbjct: 473  TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEA 184
                D V+YTT++  +CK G+VEEA  L            +  Y  +++GLC +  + E 
Sbjct: 533  EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 592

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI--------- 235
              L  +M   G+  N  T S         G++  S  ++ +M   G  P++         
Sbjct: 593  EALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPSLLKDIKSGVC 644

Query: 236  HSFTSLLKGYLLGGRT------------------HEASDLWNRMIREGFLPNVVAYSTLI 277
                SLL+ +   G+T                   +A  L+  M++    P+++ +S L+
Sbjct: 645  KKALSLLRAF--SGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLL 702

Query: 278  HGLCSNGSMDEAVSVSYQMEENSCP----------------------------------- 302
              +      D  +S+  QM+    P                                   
Sbjct: 703  SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYE 762

Query: 303  PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            PN+ T S+L++G+  +  +  A  + ++M   G  PN V +  ++  L  +N   +A +L
Sbjct: 763  PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 822

Query: 363  IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            I++M  + C P+ VT+   + GLC  G  D A  LL++M+Q +  P +  YN ++DGL +
Sbjct: 823  IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 882

Query: 423  VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
               + +A  L  E+E  GI+ N+VTY++++  +C  G   +A +LL  M+      D  T
Sbjct: 883  YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 942

Query: 483  FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
            F+ +I A+ K+GK+  A +L D +      +P I++Y+SL+ G C    + EA    + M
Sbjct: 943  FSALIDAFVKEGKLVEAEKLYDEMVKRS-IDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 1001

Query: 543  LNEGICPNFATWNVLVR 559
            +++   P+  T+N L++
Sbjct: 1002 VSKHCFPDVVTYNTLIK 1018



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 224/418 (53%), Gaps = 5/418 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A++   ++ ++  +   M+  G+  +++T+NI++   C   +V  A  +
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCK 177
           L +M   G  PD V+  ++V+  C+  +V +A  L  +     +   +  YNA+I+ LCK
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             ++ +AF    E+  +GI PNV+TY+ +++ LC+      +  +L  M  +   PN+ +
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++LL  ++  G+  EA +L+  M+R    P++V YS+LI+GLC +  +DEA  +   M 
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C  +V +Y+ LI+GF KA  +    +++  M   G   N V Y  +++   Q     
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A     +M F    P+  T+N  + GLC  G ++ A+ + + M++ E   +I TY  ++
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            G+ +  +V+EA+ L   +   G++ +IVTY T++ G+C  G++ E   L  KM  EG
Sbjct: 546 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 237/470 (50%), Gaps = 14/470 (2%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++S+M +    P++  +N LL A+ K  + D    L  +M   G   D  ++  +++  C
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 234

Query: 147 KLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
              QV  A     + L + +        +L+NG C+ +++ +A  L+ +MV+ G  P+++
Sbjct: 235 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 294

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            Y+ II SLC    V  +     ++  +G  PN+ ++T+L+ G     R  +A+ L + M
Sbjct: 295 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 354

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I++   PNV+ YS L+     NG + EA  +  +M   S  P++ TYS+LI+G      +
Sbjct: 355 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 414

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A+Q+++ M+S GC  +VV+Y  ++   C+         L  +M+      NTVT+NT 
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 474

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I+G    G VD A +   QM  +   P+I TYN LL GL     +++A  +  +++K  +
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            L+IVTY T++ G+C+ G V EA+ L   + ++G K D +T+  ++   C +G ++    
Sbjct: 535 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 594

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           L  +++  G    D            + G +  +   ++KML+ G  P+ 
Sbjct: 595 LYTKMKQEGLMKNDC---------TLSDGDITLSAELIKKMLSCGYAPSL 635



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 156/612 (25%), Positives = 282/612 (46%), Gaps = 66/612 (10%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L ++M+V G+      F  VIN +        AL +  ++ + G +P       +
Sbjct: 205 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 264

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++     NR S    +   M   G +P++  YN ++ +LCK  RV+ A+    E+  KG 
Sbjct: 265 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 324

Query: 132 APDAVSYTTIVSSIC-----------------------------------KLGQVEEARE 156
            P+ V+YT +V+ +C                                   K G+V EA+E
Sbjct: 325 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 384

Query: 157 L-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L      M     +  Y++LINGLC   +I+EA  +   MV +G   +V++Y+T+I+  C
Sbjct: 385 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 444

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               VE  + +  +M  RG   N  ++ +L++G+   G   +A + +++M   G  P++ 
Sbjct: 445 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 504

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ L+ GLC NG +++A+ +   M++     ++ TY+ +I G  K G +  A  ++  +
Sbjct: 505 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 564

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT--------FIK 383
              G  P++V YT M+  LC   + H+  +L  KM  E    N  T +          IK
Sbjct: 565 SLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIK 624

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNIT-----------TYNELL--DGLLRVNRVKEAF 430
            +  CG   +A  LL  +K   C   ++            Y E L  +GL  + ++ +A 
Sbjct: 625 KMLSCG---YAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSEL-KLDDAV 680

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L  E+ K     +I+ ++ +L  + +         L  +M   G   +  T++I+I  +
Sbjct: 681 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 740

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C++ ++  A+ +L ++   G + P+I++ +SLL G C+S  + EA   + +M   G  PN
Sbjct: 741 CRRSQLPLALAVLGKMMKLG-YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPN 799

Query: 551 FATWNVLVRSLF 562
             T+N L+  LF
Sbjct: 800 TVTFNTLIHGLF 811



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 205/399 (51%), Gaps = 1/399 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           SG  +   L     ++ K+ +A  L  +MV     P+++ ++ ++S++  +   +  + +
Sbjct: 151 SGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISL 210

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M V G   ++++F  ++  +    +   A  +  +M++ G+ P+ V   +L++G C 
Sbjct: 211 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 270

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              + +AVS+  +M E    P++  Y+A+ID   K   +  A   +  +   G  PNVV 
Sbjct: 271 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 330

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT +V  LC ++ +  A  L+  M  +   PN +T++  +      G+V  A +L ++M 
Sbjct: 331 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 390

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P+I TY+ L++GL   +R+ EA ++   +   G   ++V+YNT+++G C+A  V 
Sbjct: 391 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 450

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +  +L  +M   G   + +T+N +I  + + G V+ A +   ++   G  +PDI +Y  L
Sbjct: 451 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNIL 509

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L G+C++G +++A +  + M    +  +  T+  ++R +
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 548



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 176/349 (50%), Gaps = 2/349 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F  LL   +   +      L  +M   G   ++  ++ +I+  C    +  A+S+
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P+  T  +L++GF +   +  A  + ++M+  G  P++VAY  ++  LC+
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 305

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               + A    +++  +   PN VT+   + GLC   R   A +LL  M + +  PN+ T
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ LLD  ++  +V EA EL  E+ +  I  +IVTY+++++G+C    + EA Q+   M+
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +++N +I  +CK  +V + ++L   +   G    + ++Y +L+ G   +G +
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG-LVSNTVTYNTLIQGFFQAGDV 484

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            +A  +  +M   GI P+  T+N+L+  L  N G L    ++ + M  +
Sbjct: 485 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDN-GELEKALVIFEDMQKR 532



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 106/192 (55%), Gaps = 1/192 (0%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +++ A+ L   M +    P+I  +N LL  ++++ +      L  ++E  GI+ ++ T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++  C    V  A  +LGKML  G + D +T   ++  +C++ +V++A+ L+D++   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++Y +++  +C +  + +AF + +++  +GI PN  T+  LV  L ++     
Sbjct: 288 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346

Query: 570 PVYILDDIMANK 581
              +L D++  K
Sbjct: 347 AARLLSDMIKKK 358


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 276/558 (49%), Gaps = 7/558 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I+    L++++   G + +   + +++N   ++G  E+A+ +  +I + G  P V  Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L  E R      ++  M   G+  +   Y  L++ L +  ++  A  +   M + 
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           GC PD V+ +T++  + K G++  A  +     A        VY+ALI+GLCK  K++ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M      P+ ITY+ +I  LC  G+VE +     +M   GC P+++++  L+ G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 245 YLLGGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           +   G T  AS  L       G   ++  Y+ ++  L  N  ++EAV++  ++  N C P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            + TY+AL++G  K G L  A  +  +++ NGC+P+VV YT ++  L +     +A+ L 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++MA      +TV +   I+ L   G++  A  +   M  + C+P++ T + ++DGL + 
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R+  A  +   +E  G+  N V Y+ ++HG+C+A  +  A ++L +M       D IT+
Sbjct: 421 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 480

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           NI+I   CK G V  A    D +   G   PD+ +Y  L+ G C +G    A      M 
Sbjct: 481 NILIDGLCKSGDVEAARAFFDEMLEAG-CKPDVYTYNILISGFCKAGNTDAACGVFDDMS 539

Query: 544 NEGICPNFATWNVLVRSL 561
           +     N  T+  L+  L
Sbjct: 540 SSRCSANVVTYGALISGL 557



 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 270/536 (50%), Gaps = 7/536 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+++   G +     + S+I+   +   + +A K+F  +   GL      Y  ++  LL
Sbjct: 43  LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELL 102

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    + +Y  M   G  P+V T + ++  L K  R+  A ++   M  +G AP+ V
Sbjct: 103 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEV 162

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
            Y+ ++  +CK  +++ A E+  +            YN LI+GLCK   +E A     EM
Sbjct: 163 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM 222

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ-MFVRGCNPNIHSFTSLLKGYLLGGR 250
           ++ G  P+V TY+ +IS  C  GN + +   L Q   + GC  +IH++T+++       +
Sbjct: 223 LEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKK 282

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA  L  ++   G  P +  Y+ L++GLC  G ++EA+ +  ++ +N C P+V TY++
Sbjct: 283 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 342

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LIDG  K      A +++  M   G + + V YT +++ L Q     QA S+ + M    
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C P+ VT +T I GL   GR+  A+++   M+     PN   Y+ L+ GL +  ++  A 
Sbjct: 403 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 462

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           E++ +++K     + +TYN ++ G+C++G V  A     +ML  G K D  T+NI+I  +
Sbjct: 463 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 522

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           CK G  + A  + D +      + ++++Y +L+ G+C    + +A +Y Q M   G
Sbjct: 523 CKAGNTDAACGVFDDM-SSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 238/505 (47%), Gaps = 41/505 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG++        L ++M + G++     + ++I    + G   QA  ++  +   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V   + ++D L    R      I+ +M+  G+ PN   Y+ L+  LCK  ++D A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           ++L +M    C PD ++Y  ++  +CK G VE AR      L       V  YN LI+G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 176 CKE------------------------------------HKIEEAFWLLCEMVDRGIDPN 199
           CK                                      KIEEA  L+ ++   G  P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           + TY+ +++ LC +G +E ++ +L ++   GC P++ ++TSL+ G     R+ EA  L+ 
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M   G   + V Y+ LI  L   G + +A SV   M  + C P+V T S +IDG +KAG
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A +I+  M + G +PN V Y+ ++  LC+      A  ++ +M    C P+T+T+N
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I GLC  G V+ A    D+M +  C P++ TYN L+ G  +      A  +  ++   
Sbjct: 482 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 541

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEA 464
               N+VTY  ++ G+C+   + +A
Sbjct: 542 RCSANVVTYGALISGLCKRRQLTKA 566


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 286/563 (50%), Gaps = 15/563 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI    ++  +D    +  +M+  G+  +  V+ ++IN   ++G  E+  K+   + + G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++D    E        +   M R+G+     TYN LLK  C  + +D A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           +L   M  +G AP+ +S +T++  + K G+ E+A       LA      V  +N +INGL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++ EA  LL  M +    P+ +TY T+    C +G + T+  ++ +M   G  P++
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S + G+ +  + H+ +D+ + M   G  PN+V Y  LI G C  G++ EA ++ ++
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N   PNV   SAL+  F K G +  A+ +  ++++    P      C +  +  + +
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG-----CSISTIEIDKI 684

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H    +++ +A  N     V +N  I GLC  GR+  A  L + ++    LP+  TY+ 
Sbjct: 685 SH----VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSS 740

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G      + EAF L   +   G+  NI+TYN++++G+C++G +  A  L  K+  +G
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + IT+N +I  YCK+GK   A +L  ++   G   P +I+Y+ L++G+C  G M+EA
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG-IQPTVITYSILIYGLCTQGYMEEA 859

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
              L +M+   + PN+ T+  L+
Sbjct: 860 IKLLDQMIENNVDPNYITYCTLI 882



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 176/664 (26%), Positives = 301/664 (45%), Gaps = 105/664 (15%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           QM++ GV   E     +  +Y R G   QA++    +   GL+  +  Y+ ++D      
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSY 138
                  I  +++R G+ PNV TY +L+K  CK+ R++ A +++ EM   G    D V+Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 139 TTIVSSICKLGQVEEAREL--AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMV 192
             +++  C+ G++++A  +   MR  +G+     VYN +INGLCK  ++EE   +L EM 
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 193 DRGIDPN-----------------------------------VITYSTIISSLCDVGNVE 217
           D G+ P+                                    +TY+T++   C +  ++
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +   M  RG  PN  S ++LL G    G+T +A +LW   +  G   NV+ ++T+I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +GLC  G M EA  +  +M+E  CPP+  TY  L DG+ K G L  A+ + N+M   G +
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+V  +   +        +H+ + +  +M+     PN VT+   I G C  G +  A  L
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEA---------FELVT-------EIEKCGI 441
             +M      PN+   + L+    +  +V EA          +++        EI+K   
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 442 QLNI----------VTYNTILHGVCRAGMVV----------------------------- 462
            ++           V +N I+ G+C++G +                              
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 463 ------EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
                 EAF L   ML  G   + IT+N +IY  CK GK++ A+ L ++++  G  +P+ 
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG-ISPNG 805

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
           I+Y +L+   C  G   EAF   QKM+ EGI P   T+++L+  L +       + +LD 
Sbjct: 806 ITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQ 865

Query: 577 IMAN 580
           ++ N
Sbjct: 866 MIEN 869



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/613 (24%), Positives = 292/613 (47%), Gaps = 69/613 (11%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ ++   G    AL +F  + + G +P+++  N +L+ L+      M   +Y  M+
Sbjct: 151 FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210

Query: 93  RDGMEPNVFTYNILLKALCKNNRV-----------------------------------D 117
             G+ P+ FT  I+ KA C++ RV                                   +
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFGSGVSV----YNAL 171
            A ++L  +  KG +P+ V+YT +V   CK G++EEA  +   M+    + V    Y  +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ING C+  ++++A  +  EM D GI  N+  Y+T+I+ LC +G +E    +L +M   G 
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+ +S+ +L+ GY   G   +A ++   M+R G     + Y+TL+ G CS  ++D+A+ 
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           + + M +    PN  + S L+DG  KAG    A  +W   ++ G + NV+ +  ++  LC
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  L+++M    CPP+++T+ T   G C  G++  A  L+++M+     P++ 
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVE 570

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            +N  + G     +  +  ++ +E+   G+  N+VTY  ++ G C+ G + EA  L  +M
Sbjct: 571 MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNA--------------------------IQLLDR 505
           +  G   +    + ++  + K+GKV+ A                            ++D 
Sbjct: 631 VNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDT 690

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           I  G   + +++ +  +++G+C SG + +A    + + N+   P+  T++ L+    ++ 
Sbjct: 691 IADGNPHSANVM-WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS- 748

Query: 566 GHLGPVYILDDIM 578
           G +   + L D+M
Sbjct: 749 GSIDEAFSLRDVM 761



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 257/569 (45%), Gaps = 63/569 (11%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           + RRV L   A    +R+     +P++  +  +L  L    RF     + S++     EP
Sbjct: 76  ALRRVRLDPDAALHLFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPHA-EP 132

Query: 99  --------------NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                         +  ++++LL+A     ++  A  +   MG  GC P   S   +++ 
Sbjct: 133 LFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192

Query: 145 ICKLGQVEEARELAMRFG----SGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           + + G    A   AM +G    +GV         +    C++ ++ +A   + EM   G+
Sbjct: 193 LVQSGDPGMA---AMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGL 249

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           + N++ Y  ++   C +G  E +  IL  +  +G +PN+ ++T L+KGY   GR  EA  
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 257 LWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +   M   G  + + VAY  +I+G C  G MD+A  V  +M +     N+  Y+ +I+G 
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G +    ++   M   G  P+  +Y  ++   C+     +A  +   M        T
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           +T+NT +KG C    +D A++L   M +    PN  + + LLDGL +  + ++A  L  E
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
               G+  N++T+NT+++G+C+ G + EA +LL +M       D++T+  +   YCK G+
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 496 VNNAIQLLDRIRGGG-------------------EWN---------------PDIISYTS 521
           +  A  L++++   G                   +W+               P++++Y +
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           L+ G C  G + EA     +M+N G+ PN
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPN 638



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 260/544 (47%), Gaps = 72/544 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +   ++ VQ +LQ+M+  G+   +  + ++I+ Y R G   +A +M   +   G
Sbjct: 365 MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNG 424

Query: 61  LKPTVKIYNHIL----------DAL----------LAENRFS---MINPIYSNMKRD--- 94
           L  T   YN +L          DAL          +A N  S   +++ ++   K +   
Sbjct: 425 LAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQAL 484

Query: 95  ---------GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                    G+  NV T+N ++  LCK  R+  A +LL  M    C PD+++Y T+    
Sbjct: 485 NLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGY 544

Query: 146 CKLGQVEEARELAMR-----FGSGVSVYNALING--LCKE-HKIEEAFWLLCEMVDRGID 197
           CKLGQ+  A  L  +     F   V ++N+ I G  + K+ HK+ +   +  EM  RG+ 
Sbjct: 545 CKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVND---IHSEMSARGLS 601

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           PN++TY  +I+  C  GN+  +  +  +M   G NPN+   ++L+  +   G+  EA+ +
Sbjct: 602 PNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLV 661

Query: 258 WNRMIREGFLPNV--------------------------VAYSTLIHGLCSNGSMDEAVS 291
             +++    +P                            V ++ +I GLC +G + +A S
Sbjct: 662 LQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKS 721

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   +      P+  TYS+LI G A +G++  A  + + M+S G +PN++ Y  ++  LC
Sbjct: 722 LFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLC 781

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           ++    +A +L  K+  +   PN +T+NT I   C  G+   A KL  +M +    P + 
Sbjct: 782 KSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVI 841

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY+ L+ GL     ++EA +L+ ++ +  +  N +TY T++HG  ++G + E  +L  +M
Sbjct: 842 TYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 901

Query: 472 LIEG 475
            I G
Sbjct: 902 HIRG 905



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 191/409 (46%), Gaps = 15/409 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G   E    + LL +MK          + ++ + Y ++G    A  +  ++   G  P
Sbjct: 511 KIGRMAE---AEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           +V+++N  +       ++  +N I+S M   G+ PN+ TY  L+   CK   +  A  L 
Sbjct: 568 SVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLY 627

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
            EM N G  P+    + ++S   K G+V+EA  +  +      V   +I G C    IE 
Sbjct: 628 FEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL-----VNIDMIPG-CSISTIE- 680

Query: 184 AFWLLCEMVDRGIDPNV----ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
               +  +VD   D N     + ++ II  LC  G +  +  +   +  +   P+  +++
Sbjct: 681 -IDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL+ G    G   EA  L + M+  G  PN++ Y++LI+GLC +G +  AV++  +++  
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PN  TY+ LID + K G    A ++  +M+  G  P V+ Y+ ++  LC      +A
Sbjct: 800 GISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEA 859

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             L+++M   N  PN +T+ T I G    G ++   KL D+M     LP
Sbjct: 860 IKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 211/432 (48%), Gaps = 23/432 (5%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           P  VS+  ++  + +  +  +AR              AL++ L      E  F  L E V
Sbjct: 98  PSLVSHAQLLHILARARRFHDAR--------------ALLSSLPPH--AEPLFPHLAE-V 140

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            R    + +++  ++ +  D G + ++L +   M   GC P++ S   LL   +  G   
Sbjct: 141 YRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPG 200

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A+ ++ +M   G LP+    + +    C +G + +AV    +ME      N+  Y A++
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NC 371
           D +   G    A +I   +   G SPNVV YT +VK  C++    +A  ++++M    + 
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + V +   I G C  GR+D A ++ ++M+      N+  YN +++GL ++ R++E  +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++ E+E  G++ +  +YNT++ G CR G + +AF++   M+  G     +T+N ++  +C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 492 KQGKVNNAIQL--LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
               +++A++L  L   RG     P+ IS ++LL G+  +G  ++A    ++ L  G+  
Sbjct: 441 SLHAIDDALRLWFLMLKRGVA---PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAK 497

Query: 550 NFATWNVLVRSL 561
           N  T+N ++  L
Sbjct: 498 NVITFNTVINGL 509



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 163/345 (47%), Gaps = 15/345 (4%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRM-------------IREGFLPNVVAYSTLIHG 279
           P++ S   LL       R H+A  L + +             +   F  + V++  L+  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G +  A++V   M +  C P++ + + L++   ++G+   A+ ++ +M   G  P+
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
                 M K  C++    QA   +E+M       N V ++  +   CG G  + A ++L+
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRA 458
            +++    PN+ TY  L+ G  +  R++EA  +V E+++ G I ++ V Y  +++G C+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + +A ++  +M   G  ++   +N +I   CK G++    ++L  +   G   PD  S
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG-MRPDKYS 396

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           Y +L+ G C  G M++AF   + M+  G+     T+N L++   S
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 167/518 (32%), Positives = 262/518 (50%), Gaps = 7/518 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L  F  +   G+ P +K  N +L AL  E R+  +  +Y+ M + G+EP++ TYN LL +
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 110 LCKNNRVDGAYKLLVEMGNK--GCAPDAVSYTTIVSSICKLGQVEEARELA--MRFGSGV 165
             +  RVD A KLL EM  +  GC P  V+Y  +++ + + G++E+A +L   MR     
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA 300

Query: 166 SVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           S +  N LI G      +E+A  L  EM + GI P V+TY+TII  +   GNVE +    
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P++ ++ SL+ GY   G   EA  L+  + R G  P+V+ Y+ L+ G C  
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRL 420

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++EA     +M E  C P+V+TY+ L++G  K  NL    + ++ M+S G  P+  AY
Sbjct: 421 GDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAY 480

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +          +A  L E M       +TVT+N F+ GLC  G +  A  L  +M  
Sbjct: 481 NTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY  L+       R++EA ++   +   G+  + VTY   +H  CR G +  
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS 600

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A+    KML EG + + +T+N++I+A C+ G+ N A Q    +   G  +P+  +YT L+
Sbjct: 601 AYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERG-LSPNKYTYTLLI 659

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G C  G  +EA     +M   GI P+  T N L +  
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 251/513 (48%), Gaps = 9/513 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI--RE 58
           ++  L ++   D ++ +  +M   G+  S   + ++++S+ R G  +QA K+   +  R 
Sbjct: 202 VLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARP 261

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G  P+   YN +++ L  +        +   M R   + + FT+N L+        V+ 
Sbjct: 262 GGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEK 320

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----EL-AMRFGSGVSVYNALIN 173
           A  L +EM N+G  P  V+Y TI+  + + G VE AR    E+ AM     +  YN+LIN
Sbjct: 321 AGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLIN 380

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CK   ++EA WL  ++   G+ P+V+TY+ ++   C +G++E +     +M  +GC P
Sbjct: 381 GYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQP 440

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++T L+ G           + ++ M+ +G  P+  AY+T I      GS  EA  ++
Sbjct: 441 DVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLT 500

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M       +  TY+  +DG  K+GNL  A  +W +M+S+G  P+ + YTC++   C+ 
Sbjct: 501 EVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCER 560

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  + + M     PP+ VT+  FI   C  G +  A     +M +    PN  TY
Sbjct: 561 GRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTY 620

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+  L R+ R   A++   E+ + G+  N  TY  ++ G C+ G   EA +L  +M  
Sbjct: 621 NVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQ 680

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            G   D  T N +   +  +G+  +AIQ ++ +
Sbjct: 681 HGIHPDHCTHNALFKGF-DEGQSKHAIQYMENV 712



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 4/192 (2%)

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           +  FNT  +           +    +M  +   P I   N +L  L    R  +   +  
Sbjct: 161 STKFNTRARNPAPSTCSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYA 220

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE--GTKLDAITFNIIIYAYCK 492
           E+ + GI+ +IVTYNT+L    R G V +A +LL +M     G     +T+N++I    +
Sbjct: 221 EMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLAR 280

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G++  A QL+DR+R   + +    ++  L+ G    G +++A     +M NEGI P   
Sbjct: 281 KGELEKAAQLVDRMRMSKKAS--AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVV 338

Query: 553 TWNVLVRSLFSN 564
           T+N ++  +F +
Sbjct: 339 TYNTIIHGMFRS 350


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 290/578 (50%), Gaps = 18/578 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +ID    LL +M   G+  +  +  S+IN Y + G   +A  +  R+ ++ LKP    YN
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD    E   S    +   M ++G+EP V TYN LLK LC+    D A ++   M  +
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 466

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G APD V Y+T++  + K+   E A       LA  F      +N +I+GLCK  K+ EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M D G  P+ ITY T+I   C   NV  +  + G M     +P+I  + SL+ G
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 586

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  E +DL   M   G  PN+V Y  LI G C  G +D+A S  ++M EN    N
Sbjct: 587 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +   S ++ G  + G +  A+ +  +M+ +G  P+   + C +K    +++ + A   I 
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLK----SDIRYAAIQKIA 699

Query: 365 KMAFENCP----PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
               E+C     PN + +N  I GLC  G+VD A +    +     +P+  TY  L+ G 
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                V EAF L  E+ + G+  NIVTYN +++G+C++  V  A +L  K+  +G   + 
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N +I  YCK G ++ A +L D++   G  +P +++Y++L+ G+C  G ++ +   L 
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEEG-ISPSVVTYSALINGLCKHGDIERSMKLLN 878

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           +M+  G+      +  LV+    + G +  ++ L D+M
Sbjct: 879 QMIKAGVDSKLIEYCTLVQGYIRS-GEMQKIHKLYDMM 915



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  VF  ++  Y   GL + AL +F  + + G  P+++  N +L+ L+        + +Y
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             M R G+ P+VF  +I++ A CK+ +VD A   + +M N G  P+ V+Y ++++    L
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 149 GQVEEARELAMRFGS--GVS----VYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVI 201
           G VE A+ + ++F S  GVS     Y  LI G CK+ K++EA  +L  M +   + P+  
Sbjct: 275 GDVEAAKGV-LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            Y  +I   C  G ++ ++ +L +M   G   N+    SL+ GY   G  HEA  +  RM
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +     P+  +Y+TL+ G C  G   EA ++  +M +    P V TY+ L+ G  + G  
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A QIW+ M+  G +P+ V Y+ ++  L +   F  A +L + +       + +TFNT 
Sbjct: 454 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC  G++  A ++ D+MK   C P+  TY  L+DG  + + V +AF++   +E+  I
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 573

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             +I  YN+++ G+ ++  +VE   LL +M I G   + +T+  +I  +CK+G ++ A  
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
               +   G  + +II  ++++ G+   G + EA + +QKM++ G  P+
Sbjct: 634 SYFEMTENG-LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 284/599 (47%), Gaps = 39/599 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  E     Y+ QQM   G+     +   ++N++ + G  ++A     ++   G
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 256

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  Y+ +++  ++         +   M   G+  NV TY +L+K  CK  ++D A 
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 316

Query: 121 KLLVEMGNKGC-APDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSVY--NALING 174
           K+L  M  +    PD  +Y  ++   C+ G++++A  L    +R G   +++  N+LING
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK  +I EA  ++  MVD  + P+  +Y+T++   C  G+   +  +  +M   G  P 
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +LLKG    G   +A  +W+ M++ G  P+ V YSTL+ GL    + + A ++  
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 496

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +       +  T++ +I G  K G ++ A +I+++M   GCSP+ + Y  ++   C+ +
Sbjct: 497 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              QA  +   M  E   P+   +N+ I GL    R+     LL +M      PNI TY 
Sbjct: 557 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 616

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   + +AF    E+ + G+  NI+  +T++ G+ R G + EA  L+ KM+  
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 475 G----------------------TKLDA----------ITFNIIIYAYCKQGKVNNAIQL 502
           G                        LD           I +NI I   CK GKV++A + 
Sbjct: 677 GFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              +   G + PD  +Y +L+ G   +G + EAF    +ML  G+ PN  T+N L+  L
Sbjct: 737 FSMLSLKG-FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 247/503 (49%), Gaps = 37/503 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  EG+  +   + +++    RVG  + AL++++ + + G+ P    Y+ +LD L 
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 483

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F   + ++ ++   G   +  T+N ++  LCK  ++  A ++  +M + GC+PD +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 137 SYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CK   V +A ++  AM        + +YN+LI+GL K  ++ E   LL EM
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 603

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+ PN++TY  +I   C  G ++ +     +M   G + NI   ++++ G    GR 
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 252 HEASDLWNRMIREGF--------------------------------LPNVVAYSTLIHG 279
            EA+ L  +M+  GF                                LPN + Y+  I G
Sbjct: 664 DEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAG 723

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G +D+A      +      P+  TY  LI G++ AGN+  A ++ + M+  G  PN
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           +V Y  ++  LC++    +A  L  K+  +   PN VT+NT I G C  G +D A KL D
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M +    P++ TY+ L++GL +   ++ + +L+ ++ K G+   ++ Y T++ G  R+G
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903

Query: 460 MVVEAFQLLGKMLIEGTKLDAIT 482
            + +  +L   M I      AI+
Sbjct: 904 EMQKIHKLYDMMHIRCLSTTAIS 926



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 212/445 (47%), Gaps = 38/445 (8%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            +G   L + +   G + S   F ++I+   ++G   +A ++F ++++ G  P    Y  
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D     +       +   M+R+ + P++  YN L+  L K+ R+     LL EMG +G
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
             P+ V+Y  ++   CK G +++A             + + + + +++GL +  +I+EA 
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667

Query: 186 WLLCEMVDRG--------------------------------IDPNVITYSTIISSLCDV 213
            L+ +MVD G                                + PN I Y+  I+ LC  
Sbjct: 668 LLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKT 727

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V+ +      + ++G  P+  ++ +L+ GY   G   EA  L + M+R G +PN+V Y
Sbjct: 728 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTY 787

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + LI+GLC + ++D A  + +++ +    PNV TY+ LIDG+ K GN+  A ++ ++MI 
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G SP+VV Y+ ++  LC++    ++  L+ +M         + + T ++G    G +  
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQK 907

Query: 394 AMKLLDQMKQYECLPNITTYNELLD 418
             KL D M    CL      ++ +D
Sbjct: 908 IHKLYDMM-HIRCLSTTAISHKQVD 931



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 203/430 (47%), Gaps = 13/430 (3%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           P+  SY  +V  + +    +E R          +  N L++ LCK        W     V
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETR----------AYLNQLVD-LCKFKDRGNVIWDELVGV 148

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            R    +   +  I+    + G  + +L +   M   G  P++ S  SLL   +  G TH
Sbjct: 149 YREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 208

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A  ++ +MIR G +P+V   S +++  C +G +DEA     +ME     PN+ TY +LI
Sbjct: 209 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 268

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC- 371
           +G+   G++  A  +   M   G S NVV YT ++K  C+     +A  ++  M  E   
Sbjct: 269 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 328

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   +   I G C  G++D A++LLD+M +     N+   N L++G  +   + EA  
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++T +    ++ +  +YNT+L G CR G   EAF L  KML EG +   +T+N ++   C
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           + G  ++A+Q+   +   G   PD + Y++LL G+      + A    + +L  G   + 
Sbjct: 449 RVGAFDDALQIWHLMMKRG-VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 507

Query: 552 ATWNVLVRSL 561
            T+N ++  L
Sbjct: 508 ITFNTMISGL 517



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 60/356 (16%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM---------------------EENSC 301
           ++ F PNV +Y  L+H L      DE  +   Q+                      E + 
Sbjct: 95  QQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAF 154

Query: 302 PPNV------------TTYSAL---------------------IDGFAKAGNLLGASQIW 328
            P V             T +AL                     ++   K G    A  ++
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            +MI  G  P+V   + MV   C++    +A   ++KM      PN VT+++ I G    
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVT 447
           G V+ A  +L  M +     N+ TY  L+ G  +  ++ EA +++  + E+  +  +   
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  ++ G CR G + +A +LL +ML  G K +    N +I  YCK+G+++ A  ++ R+ 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 508 GGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              +WN  PD  SY +LL G C  G   EAF    KML EGI P   T+N L++ L
Sbjct: 395 ---DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/141 (18%), Positives = 67/141 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D  Q L  ++  +G+  +   + ++I+ Y ++G  + A K+  ++ E G
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P+V  Y+ +++ L           + + M + G++  +  Y  L++   ++  +   +
Sbjct: 850 ISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIH 909

Query: 121 KLLVEMGNKGCAPDAVSYTTI 141
           KL   M  +  +  A+S+  +
Sbjct: 910 KLYDMMHIRCLSTTAISHKQV 930


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 169/570 (29%), Positives = 288/570 (50%), Gaps = 48/570 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++++L +   +  V  +++ ++ +   C E V ++VI +Y +  + +QAL +F R+ E F
Sbjct: 49  ILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIF 108

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P ++ YN +L+AL+  N++      +   +  G+ PN+ TYNIL+K  C+  + D A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE-------------------------- 153
            +LL  M  +G +PD  SY T+++S+ K G + +                          
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 154 ---------ARELAMRFGSGVSV------YNALINGLCKEHKIEEAF--WLLCEMVDRGI 196
                    A E+  R   G SV      YN +INGLCK  K +E+F  W   +  +RG 
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           D  + TYST+I  LC  GN++ +  +  +M   G +P++  + ++L GYL  GR  E  +
Sbjct: 289 D--LYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           LW  M +EG    VV+Y+ LI GL  N  +DEA+S+   + E  C  +  TY  L+ G  
Sbjct: 347 LWKVMEKEG-CRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 405

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G L  A  I     +     +  AY+ M+  LC+     +   ++++M    C PN  
Sbjct: 406 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPH 465

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
             N  I G     +++ A++    M    C P + TYN L++GL +  R  EA+ LV E+
Sbjct: 466 VCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM 525

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
              G + N++TY+ +++G+C+   +  A  L  + L +G K D    NIII+  C  GKV
Sbjct: 526 LHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 585

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
            +A+QL   ++   +  P+++++ +L+ G 
Sbjct: 586 EDALQLYSEMK-QRKCVPNLVTHNTLMEGF 614



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 193/365 (52%), Gaps = 3/365 (0%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G  P + +Y++++++L +    + +          G +PN+ ++  L+K      +  +A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
            +L N M  +GF P+V +Y TLI+ L  NG M +A+ +  +M E    P+V  Y+ LIDG
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228

Query: 315 FAKAGNLLGASQIWNRMISN-GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           F K G++L AS+IW R++      PN+ +Y  M+  LC+   F ++  +  +M       
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +  T++T I GLCG G +D A ++  +M +    P++  YN +L+G LR  R++E  EL 
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +EK G +  +V+YN ++ G+     V EA  +   +  +    D++T+ ++++  CK 
Sbjct: 349 KVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 407

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G +N A+ +L+     G  + D  +Y+S++ G+C  G + E    L +M   G  PN   
Sbjct: 408 GYLNKALSILEEAE-NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHV 466

Query: 554 WNVLV 558
            N ++
Sbjct: 467 CNAVI 471



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 201/472 (42%), Gaps = 75/472 (15%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K + D  + LL  M  +G S     + ++INS  + G    ALK+F  + E G+ P V 
Sbjct: 161 RKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVA 220

Query: 67  IYNHILDALLAEN------------------------------------RFSMINPIYSN 90
            YN ++D    +                                     +F     I+  
Sbjct: 221 CYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHR 280

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           MK++    +++TY+ L+  LC +  +DGA ++  EM   G +PD V Y T+++   + G+
Sbjct: 281 MKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGR 340

Query: 151 VEEAREL------------------------AMRFGSGVSV---------------YNAL 171
           +EE  EL                          +    +S+               Y  L
Sbjct: 341 IEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVL 400

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GLCK   + +A  +L E  +   D +   YS++I+ LC  G ++   G+L QM   GC
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN H   +++ G++   +  +A   +  M+ +G  P VV Y+TLI+GL       EA +
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M      PN+ TYS L++G  +   L  A  +W + +  G  P+V  +  ++  LC
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            +     A  L  +M    C PN VT NT ++G       + A K+ D + Q
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQ 632



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 184/342 (53%), Gaps = 8/342 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +DG   + ++M   GVS    V+ +++N Y R G  E+ L+++  + + G + TV  YN 
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L    +      I+  +       +  TY +L+  LCKN  ++ A  +L E  N  
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAF 185
              D  +Y+++++ +C+ G+++E     +   + G      V NA+ING  +  K+E+A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
                MV +G  P V+TY+T+I+ L        +  ++ +M  +G  PN+ +++ L+ G 
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             G +   A +LW + + +GF P+V  ++ +IHGLCS+G +++A+ +  +M++  C PN+
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN--VVAYTC 345
            T++ L++GF K  +   AS+IW+ ++ +  S N   + +TC
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCYYMEHTC 646



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 2/225 (0%)

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           P  VA T ++K   +N+M  QA  + ++M     C P   ++N+ +  L    + D A  
Sbjct: 77  PEDVALT-VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
                +     PN+ TYN L+    R  +  +A EL+  + + G   ++ +Y T+++ + 
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G + +A +L  +M   G   D   +NI+I  + K+G + NA ++ +R+  G    P+I
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            SY  ++ G+C  G   E+F    +M       +  T++ L+  L
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGL 300



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 30/244 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L  +  +D V  +L QM   G   +  V  +VIN + R    E AL+ F  +   G
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PTV  YN +++ L    RFS    +   M   G +PN+ TY++L+  LC+  ++D A 
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +   KG  PD   +  I+  +C  G                              K
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSG------------------------------K 584

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E+A  L  EM  R   PN++T++T++     V + E +  I   +     + N +    
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCYYMEH 644

Query: 241 LLKG 244
             +G
Sbjct: 645 TCQG 648


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 162/539 (30%), Positives = 284/539 (52%), Gaps = 14/539 (2%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++++ Y R G    A ++   +    + P    Y  ++ AL A  R +    +   M+R 
Sbjct: 88  AMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMRRR 144

Query: 95  GMEPNVFTYNILLKALCKNNRV---DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG-Q 150
           G  P    Y+++L+A C          A ++L ++  +GCA D  +   +++++C  G  
Sbjct: 145 GCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGS 204

Query: 151 VEEA----RELAMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           V+EA    R+L   FG    V  YNA++ GLC   +      L+ EMV  G  PNV+T++
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFN 264

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I  LC  G  E    +L QM   GC P+I  + ++L G    G    A ++ +RM   
Sbjct: 265 TLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSY 324

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  PNVV Y+T++ GLCS    ++A  +  +M +N CP +  T++ L+D F + G +   
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRV 384

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++  +M+ +GC P+V+ YT ++   C+  +  +A  L++ MA   C PNT+++   +KG
Sbjct: 385 IELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKG 444

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   R   A  L+ QM +  C PN  T+N +++ L +   V++A EL+ ++   G   +
Sbjct: 445 LCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPD 504

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +++Y+T++ G+ +AG   EA +LL  M+ +G   + I ++ I  A  K+G++N  IQ+ D
Sbjct: 505 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFD 564

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            I+       D + Y +++  +C  GG   A  +L  M++ G  PN +T+ +L+R L S
Sbjct: 565 NIQ-DVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLAS 622



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 224/468 (47%), Gaps = 31/468 (6%)

Query: 44  GLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           G  ++AL++   +   FG  P V  YN +L  L    R+  +  +   M R G  PNV T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           +N L+  LC+N   +  +++L +M + GC PD   Y T+                     
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATV--------------------- 301

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                    ++G+CKE  +E A  +L  M   G+ PNV+ Y+T++  LC     E +  +
Sbjct: 302 ---------LDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +MF   C  +  +F  L+  +   G  +   +L  +M+  G +P+V+ Y+T+I+G C 
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +DEAV +   M    C PN  +Y+ ++ G   A   + A  + ++MI  GCSPN V 
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +  ++  LC+  +  QA  L+++M    C P+ ++++T I GL   G+ D A++LL+ M 
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                PN   Y+ +   L +  R+    ++   I+   I+ + V YN ++  +C+ G   
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            A + L  M+  G   +  T+ I+I     +G V  A ++L  +   G
Sbjct: 593 RAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 225/470 (47%), Gaps = 81/470 (17%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YNA+++G C+  ++  A  L   +    + PN  TY  ++ +LC  G +  +L +L +M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASV---PVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 228 VRGCNPNIHSFTSLLKGYL-----------------LGGRTHEASDLWN----------- 259
            RGC P    +  +L+                    L GR   A D+ N           
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGC-ALDVGNCNLVLNAVCDQ 201

Query: 260 --------RMIRE-----GFLPNVVAYSTLIHG--------------------------- 279
                   R++R+     G  P+VV+Y+ ++ G                           
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261

Query: 280 --------LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
                   LC NG  +    V  QM ++ C P++  Y+ ++DG  K G+L  A +I +RM
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            S G  PNVV Y  ++K LC    + QA  L+ +M   +CP + VTFN  +   C  G V
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
              ++LL+QM ++ C+P++ TY  +++G  +   + EA  L+  +  CG + N ++Y  +
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIV 441

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L G+C A   V+A  L+ +M+ +G   + +TFN +I   CK+G V  AI+LL ++   G 
Sbjct: 442 LKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG- 500

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +PD+ISY++++ G+  +G   EA   L  M+N+G+ PN   ++ +  +L
Sbjct: 501 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 550



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 187/358 (52%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ +V++   + G  E A ++  R+  +GLKP V  YN +L 
Sbjct: 279 VHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLK 338

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + + M  +    +  T+NIL+   C+N  V    +LL +M   GC P
Sbjct: 339 GLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVP 398

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     +         Y  ++ GLC   +  +A  L+
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+++G  PN +T++T+I+ LC  G VE ++ +L QM + GC+P++ S+++++ G    
Sbjct: 459 SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKA 518

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G ++  + +   +++ +   +   Y
Sbjct: 519 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLY 578

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K G    A +    M+S+GC PN   YT +++ L       +A  ++ ++
Sbjct: 579 NAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 191/393 (48%), Gaps = 5/393 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           VQ L+++M   G   +   F ++I    R GL E+  ++  ++ + G  P +++Y  +LD
Sbjct: 244 VQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLD 303

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            +  E    + + I   M   G++PNV  YN +LK LC   R + A +LL EM +  C  
Sbjct: 304 GVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPL 363

Query: 134 DAVSYTTIVSSICKLG---QVEEARELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLL 188
           D V++  +V   C+ G   +V E  E  +  G    V  Y  +ING CKE  I+EA  LL
Sbjct: 364 DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLL 423

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M   G  PN I+Y+ ++  LC       +  ++ QM  +GC+PN  +F +++      
Sbjct: 424 KSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKK 483

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A +L  +M+  G  P++++YST+I GL   G  DEA+ +   M      PN   Y
Sbjct: 484 GLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 543

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S++    +K G +    Q+++ +       + V Y  ++  LC+     +A   +  M  
Sbjct: 544 SSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVS 603

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             C PN  T+   I+GL   G V  A ++L ++
Sbjct: 604 SGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 129/256 (50%), Gaps = 5/256 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+QM   G       + +VIN + + GL ++A+ +   +   G +P    Y  +L  L 
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC 446

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R+     + S M   G  PN  T+N ++  LCK   V+ A +LL +M   GC+PD +
Sbjct: 447 SAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLI 506

Query: 137 SYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           SY+T++  + K G+ +EA EL  +    G+S    +Y+++ + L KE +I     +   +
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            D  I  + + Y+ +ISSLC  G  + ++  L  M   GC PN  ++T L++G    G  
Sbjct: 567 QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFV 626

Query: 252 HEASDLWNRMIREGFL 267
            EA ++   +  +G L
Sbjct: 627 KEAQEMLTELCSKGAL 642



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 7/191 (3%)

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  + G C  G++  A +L          PN  TY  ++  L    R+ +A  ++ E+ 
Sbjct: 86  YNAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVV---EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           + G       Y+ IL   C  G       A ++L  +   G  LD    N+++ A C QG
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 495 -KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             V+ A++LL  +      +PD++SY ++L G+C +         +++M+  G  PN  T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 554 WNVLVRSLFSN 564
           +N L+  L  N
Sbjct: 263 FNTLIGYLCRN 273



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + D    LL  M  +G+S +  ++ S+ ++  + G   + ++MF  I++  
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT 570

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L             + M   G  PN  TY IL++ L     V  A 
Sbjct: 571 IRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630

Query: 121 KLLVEMGNKG 130
           ++L E+ +KG
Sbjct: 631 EMLTELCSKG 640


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 151/458 (32%), Positives = 242/458 (52%), Gaps = 32/458 (6%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           N LL A  +  +   AY L        C+PD+++Y+T                       
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYST----------------------- 38

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
                  LING CK    ++A+ LL EM  RGI P+   Y+TII  LCD G V+++L   
Sbjct: 39  -------LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  R C P++ ++T L+       R  +AS +   MI  G  PNVV Y+TLI+G C  
Sbjct: 92  RDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G+MDEAV +  QM ENSC P+V TY+ LIDG+ K       +++   M+  GC PN + Y
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  L ++  +  A +L + M   +C P+  TFN  I   C  G++D A +L   M  
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 270

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
             CLP+I TYN ++ G  R NR+ +A +L+  + + G   ++VTYN+I+ G+C+A  V E
Sbjct: 271 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 330

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A+++   +   G  LD +T + +I   CK  ++++A +LL  +   G   PD+++YT L+
Sbjct: 331 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA-PDVVAYTILI 389

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G C +  + ++  +  +ML++G  P   T+++++  L
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 427



 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 232/439 (52%), Gaps = 4/439 (0%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N +L A + + +      ++ N       P+  TY+ L+   CK      AY+LL EM  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           +G  P    Y TI+  +C  G+V+ A    R++       V  Y  L++ LCK  +I +A
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M++ G  PNV+TY+T+I+  C +GN++ ++ +  QM    C+P++ ++  L+ G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y    R  + + L   M++ G  PN + Y+TL+  L  +G   +A +++  M    C P+
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             T++ +ID F K G L  A +++  M   GC P++  Y  M+   C+ N    A  L+E
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M    CPP+ VT+N+ + GLC   +VD A ++ + ++      ++ T + L+DGL +  
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R+ +A +L+ E+E+ G   ++V Y  ++HG C+A  + ++     +ML +G     IT++
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 421

Query: 485 IIIYAYCKQGKVNNAIQLL 503
           I+I   CK  +V +   LL
Sbjct: 422 IVIDKLCKSARVRDGCMLL 440



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 214/415 (51%), Gaps = 6/415 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++IN + +    +QA ++   + + G+ P   +YN I+  L    R       Y +M
Sbjct: 35  TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 94

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +R    P+V TY IL+ ALCK+ R+  A  +L +M   GCAP+ V+Y T+++  CKLG +
Sbjct: 95  QR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 153

Query: 152 EEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA     + L       V  YN LI+G CK+ + ++   LL EMV  G +PN ITY+T+
Sbjct: 154 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 213

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           + SL   G    +  +   M  R C P+  +F  ++  +   G+   A +L+  M   G 
Sbjct: 214 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP++  Y+ +I G C    +D+A  +  +M E  CPP+V TY++++ G  KA  +  A +
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  + + G   +VV  + ++  LC++     A  L+ +M      P+ V +   I G C
Sbjct: 334 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
              ++D ++    +M    C+P + TY+ ++D L +  RV++   L+  + + G+
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 219/445 (49%), Gaps = 6/445 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +++++ R   A++A  +F         P    Y+ +++       F     +   M++ G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+   YN ++K LC N RVD A     +M  + CAP  ++YT +V ++CK  ++ +A 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS 122

Query: 156 ---ELAMRFGSG--VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
              E  +  G    V  YN LING CK   ++EA  L  +M++    P+V TY+ +I   
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C     +    +L +M   GC PN  ++ +L+   +  G+  +A +L   M+R    P+ 
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             ++ +I   C  G +D A  +   M +  C P++ TY+ +I G  +A  +  A Q+  R
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLER 302

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   GC P+VV Y  +V  LC+ +   +A+ + E +       + VT +T I GLC   R
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 362

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A KLL +M++    P++  Y  L+ G  + +++ ++    +E+   G    ++TY+ 
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++  +C++  V +   LL  ML  G
Sbjct: 423 VIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 169/340 (49%), Gaps = 5/340 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   I     +L+ M   G + +   + ++IN + ++G  ++A+ +F ++ E  
Sbjct: 108 LVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 167

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN ++D    + R      +   M + G EPN  TYN L+ +L K+ +   A+
Sbjct: 168 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 227

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L   M  + C P   ++  ++   CK+GQ++ A EL            +  YN +I+G 
Sbjct: 228 NLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGA 287

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+ ++I++A  LL  M + G  P+V+TY++I+S LC    V+ +  +   +   G   ++
Sbjct: 288 CRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 347

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + ++L+ G     R  +A  L   M R G  P+VVAY+ LIHG C    +D++++   +
Sbjct: 348 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 407

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           M +  C P V TYS +ID   K+  +     +   M+  G
Sbjct: 408 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 34/159 (21%)

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N +L    R     EA+ L    L      D+IT++ +I  +CK      A +LLD +  
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 509 GG---------------------------------EWNPDIISYTSLLWGICNSGGMQEA 535
            G                                    P +I+YT L+  +C S  + +A
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
            + L+ M+  G  PN  T+N L+   F  LG++    +L
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLING-FCKLGNMDEAVVL 159


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 277/518 (53%), Gaps = 12/518 (2%)

Query: 48  QALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNI 105
           +AL +  ++ R FG++P+ + YN +L  L   +  +    +Y  M  RD + P  FT+ +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MR 160
             +ALC+  R + A  LL  M   GC PDAV Y T++ ++C  G V EA  L      M 
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
             + V+ ++ ++ G+C   ++ EA  L+  M+ +G  P V+TY  ++  LC V   + + 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +LG    R    N+  F +++ G L  G+  EA++L+  M  +G  P+   YS L+HGL
Sbjct: 301 AMLG----RVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G +  AV +  +ME+    PNV TY+ ++  F K G       +   M + G + N 
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  M+  LC++    +A  LI++M  + C P+  ++NT I  LC   +++ A  + + 
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           + +   + N  TYN ++  LLR  R ++A  L  E+   G  L++V+YN ++  +C+ G 
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V  +  LL +M  +G K + +++NI+I   CK+ +V +A++L  ++   G   PDI++Y 
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG-LAPDIVTYN 595

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +L+ G+C  G M  A   L+K+ NE + P+  T+N+L+
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 250/476 (52%), Gaps = 11/476 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSICKLGQ 150
           +R G++P+  +YN++L  L + +    A  L   M ++    P   ++     ++C+LG+
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 151 VEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA  L     R G      +Y  +I+ LC +  + EA  LL EM+  G   +V T+  
Sbjct: 191 ANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  +C +G V  +  ++ +M  +GC P + ++  LL+G     +  EA  +  R+    
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL- 309

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              NVV ++T+I G  + G + EA  +   M    C P+  TYS L+ G  K G +  A 
Sbjct: 310 ---NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   M   G +PNVV YT ++   C+N M+    +L+E+M+ +    N+  +N  I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  GR+D AM L+ +M+   C P+I +YN ++  L    +++EA  +   + + G+  N 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TYNTI+H + R G   +A +L  +M++ G  LD +++N +I A CK G V+ ++ LL+ 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G   P+ +SY  L+  +C    +++A    ++MLN+G+ P+  T+N L+  L
Sbjct: 547 MAEKG-IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 234/500 (46%), Gaps = 36/500 (7%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C  D +    + +  + V  +   F     +  R+G A +AL +   +   G  P   +Y
Sbjct: 154 CHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLY 213

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++ AL  +   +    + + M   G   +V T++ +++ +C   RV  A +L+  M  
Sbjct: 214 QTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMT 273

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------------------------- 163
           KGC P  ++Y  ++  +C++ Q +EAR +  R                            
Sbjct: 274 KGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATEL 333

Query: 164 -----------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                          Y+ L++GLCK  +I  A  LL EM  +G  PNV+TY+ ++ S C 
Sbjct: 334 YETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  + +  +L +M  +G   N   +  ++      GR  EA  L   M  +G  P++ +
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+T+I+ LC+N  M+EA  +   + E     N  TY+ +I    + G    A ++   MI
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +GCS +VV+Y  ++K +C++    ++  L+E+MA +   PN V++N  I  LC   RV 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  QM      P+I TYN L++GL ++  +  A  L+ ++    +  +I+TYN ++
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 453 HGVCRAGMVVEAFQLLGKML 472
              C+  ++ +A  LL + +
Sbjct: 634 SWHCKVRLLDDAAMLLNRAM 653



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 173/348 (49%), Gaps = 7/348 (2%)

Query: 219 SLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTL 276
           +L +L Q+  R G  P+  S+  +L          +A  L+ RM+ R+   P    +   
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
              LC  G  +EA+++   M  + C P+   Y  +I      G +  A+ + N M+  GC
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + +V  +  +V+ +C      +A  L+++M  + C P  +T+   ++GLC   + D A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA 301

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +L ++ +     N+  +N ++ G L   ++ EA EL   +   G Q +  TY+ ++HG+C
Sbjct: 302 MLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G +  A +LL +M  +G   + +T+ I+++++CK G  ++   LL+ +   G    + 
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKG-LTLNS 416

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             Y  +++ +C  G M EA   +Q+M ++G  P+  ++N ++  L +N
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 464



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 6/126 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGV---SCSEGVFISVINSYRRVGLAEQALKMFYRIR 57
           +I+ + +   +D    LL++M  +G+   + S  + IS +   RRV     AL++  ++ 
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV---RDALELSKQML 583

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             GL P +  YN +++ L           +   +  + + P++ TYNIL+   CK   +D
Sbjct: 584 NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLD 643

Query: 118 GAYKLL 123
            A  LL
Sbjct: 644 DAAMLL 649


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 164/583 (28%), Positives = 292/583 (50%), Gaps = 22/583 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L ++M++  + C+   F  ++  +        AL  F +I + G  PTV  +N +
Sbjct: 98  DVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTL 157

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E+R S    ++  M +    PNV T+  L+  LC+  RV  A  LL  M   G 
Sbjct: 158 LHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 213

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAF 185
            P+ ++Y TIV  +CK+G    A  L  +          V +YN +I+GL K+ +  +A 
Sbjct: 214 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAH 273

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM ++ I P+++TY+ +I+  C  G    +  +L +M  R  NP++ +F++L+  +
Sbjct: 274 NLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAF 333

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA +L++ M+    +P+ V YS++I G C    +D A  + Y      C P++
Sbjct: 334 VKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDI 393

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LI G+ +A  +    ++ + M   G   N + YT ++   CQ    + A  L+++
Sbjct: 394 ITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 453

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-----------CLPNITTYN 414
           M      PN VT NT + GLC  G++  A+++   M++ +             P++ TYN
Sbjct: 454 MISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYN 513

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+   +  EA EL  E+   GI  + +TY++++ G+C+   + EA Q+   M  +
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 573

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               D +TFN +I  YCK G V++ ++L   +   G    D I+Y +L++G      +  
Sbjct: 574 SFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRG-IVADAITYITLIYGFRKVDNIDG 632

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           A    Q+M++ G+ P+  T   ++  L+S       V +L+D+
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 277/542 (51%), Gaps = 16/542 (2%)

Query: 31  GVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           G  + + + +  +   + A+ +F Y +R   L P+V  +  ++  ++   R  ++  ++ 
Sbjct: 47  GESLKLQSGFHEIKGLDDAIDLFGYMVRSRPL-PSVIDFCKLMGVVVRMGRPDVVISLHK 105

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            M+   M  N +++ IL+K  C  +++  A     ++   G  P  V++ T++  +C   
Sbjct: 106 KMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVED 165

Query: 150 QVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           ++ EA +L  +     V  +  L+NGLC+E ++ EA  LL  M++ G+ PN ITY TI+ 
Sbjct: 166 RISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 225

Query: 209 SLCDVGNVETSLGILGQM-FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +C +G+  ++L +L +M  V    PN+  + +++ G    GR  +A +L+  M  +   
Sbjct: 226 GMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIF 285

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P++V Y+ +I+G C +G   +A  +  +M E    P+V T+SALI+ F K G    A ++
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M+     P+ V Y+ M+   C+ N    A  +      + C P+ +TFNT I G C 
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCR 405

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             RVD  +KLL +M +   + N  TY  L+ G  +V  +  A +L+ E+   G+  N+VT
Sbjct: 406 AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVT 465

Query: 448 YNTILHGVCRAGMVVEAFQLL-----GKMLIE------GTKLDAITFNIIIYAYCKQGKV 496
            NT+L G+C  G + +A ++       KM I+      G + D  T+NI+I     +GK 
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKF 525

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A +L + +   G   PD I+Y+S++ G+C    + EA      M ++   P+  T+N 
Sbjct: 526 LEAEELYEEMPHRG-IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNT 584

Query: 557 LV 558
           L+
Sbjct: 585 LI 586



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 238/493 (48%), Gaps = 17/493 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+P    Y  I+D +    +  S +N +   
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   + PNV  YN ++  L K+ R   A+ L +EM  K   PD V+Y  +++  C  G+
Sbjct: 244 EEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGR 303

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L       +    V  ++ALIN   KE K  EA  L  EM+ R I P+ +TYS+
Sbjct: 304 WSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSS 363

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C    ++ +  +      +GC+P+I +F +L+ GY    R  +   L + M   G
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            + N + Y+TLIHG C  G ++ A  +  +M  +   PNV T + L+DG    G L  A 
Sbjct: 424 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDAL 483

Query: 326 QIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +++  M             NG  P+V  Y  ++  L     F +A  L E+M      P+
Sbjct: 484 EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+T+++ I GLC   R+D A ++ D M      P++ T+N L+ G  +   V +  EL  
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFC 603

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + GI  + +TY T+++G  +   +  A  +  +M+  G   D IT   ++     + 
Sbjct: 604 EMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 663

Query: 495 KVNNAIQLLDRIR 507
           ++  A+ +L+ ++
Sbjct: 664 ELERAVAMLEDLQ 676



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 211/430 (49%), Gaps = 41/430 (9%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L +G  +   +++A  L   MV     P+VI +  ++  +  +G  +  + +  +M +  
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
              N +SFT L+K +    +   A   + ++ + GF P VV ++TL+HGLC    + EA+
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            + +QM    C PNV T++ L++G  + G ++ A  + +RM+ +G  PN + Y  +V  +
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 351 CQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           C+      A +L+ KM    +  PN V +NT I GL   GR   A  L  +M++ E  P+
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TYN +++G     R  +A +L+ E+ +  I  ++VT++ +++   + G   EA +L  
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 470 KML-----------------------------------IEGTKLDAITFNIIIYAYCKQG 494
           +ML                                    +G   D ITFN +I  YC+  
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK 407

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           +V++ I+LL  +   G    + I+YT+L+ G C  G +  A   LQ+M++ G+CPN  T 
Sbjct: 408 RVDDGIKLLHEMTEAG-LVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTC 466

Query: 555 NVLVRSLFSN 564
           N L+  L  N
Sbjct: 467 NTLLDGLCDN 476



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 214/480 (44%), Gaps = 53/480 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDAL 75
           LL +M  +G+  ++  + ++++   ++G    AL +  ++ E   + P V IYN I+D L
Sbjct: 204 LLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGL 263

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD- 134
             + R S  + ++  M+   + P++ TYN ++   C + R   A +LL EM  +   PD 
Sbjct: 264 WKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDV 323

Query: 135 ----------------------------------AVSYTTIVSSICKLGQVEEAREL--- 157
                                              V+Y++++   CK  +++ A  +   
Sbjct: 324 VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                    +  +N LI G C+  ++++   LL EM + G+  N ITY+T+I   C VG+
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE----------- 264
           +  +  +L +M   G  PN+ +  +LL G    G+  +A +++  M +            
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+V  Y+ LI GL + G   EA  +  +M      P+  TYS++IDG  K   L  A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +Q+++ M S   SP+VV +  ++   C+  M      L  +M       + +T+ T I G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQL 443
                 +D A+ +  +M      P+  T   +L GL     ++ A  ++ +++   G QL
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMSVGYQL 683



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 24/322 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+   ++  +D  +++      +G S     F ++I  Y R    +  +K+ + + E G
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      Y  ++         +    +   M   G+ PNV T N LL  LC N ++  A 
Sbjct: 424 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDAL 483

Query: 121 KLLVEMGNK-----------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SG 164
           ++   M              G  PD  +Y  ++  +   G+  EA EL            
Sbjct: 484 EMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              Y+++I+GLCK+ +++EA  +   M  +   P+V+T++T+I+  C  G V+  L +  
Sbjct: 544 TITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFC 603

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RG   +  ++ +L+ G+        A D++  MI  G  P+ +    ++ GL S  
Sbjct: 604 EMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKE 663

Query: 285 SMDEAV--------SVSYQMEE 298
            ++ AV        SV YQ+E+
Sbjct: 664 ELERAVAMLEDLQMSVGYQLED 685


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 278/518 (53%), Gaps = 12/518 (2%)

Query: 48  QALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNI 105
           +AL +  ++ R FG++P+ + YN +L  L   +  +    +Y  M  RD + P  FT+ +
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MR 160
             +ALC+  R D A  LL  M   GC PDAV Y T++ ++C  G V EA  L      M 
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
             + V+ ++ ++ G+C   ++ EA  L+  M+ +G  P V+TY  ++  LC V   + + 
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +LG++       N+  F +++ G L  G+  EA++L+  M  +G  P+   YS L+HGL
Sbjct: 301 AMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G +  AV +  +ME+    PNV TY+ ++  F K G       +   M + G + N 
Sbjct: 357 CKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNS 416

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  M+  LC++    +A  LI++M  + C P+  ++NT I  LC   +++ A  + + 
Sbjct: 417 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 476

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           + +   + N  TYN ++  LLR  R ++A  L  E+   G  L++V+YN ++  +C+ G 
Sbjct: 477 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGN 536

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V  +  LL +M  +G K + +++NI+I   CK+ +V +A++L  ++   G   PDI++Y 
Sbjct: 537 VDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG-LAPDIVTYN 595

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +L+ G+C  G M  A   L+K+ NE + P+  T+N+L+
Sbjct: 596 TLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/476 (29%), Positives = 251/476 (52%), Gaps = 11/476 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSICKLGQ 150
           +R G++P+  +YN++L  L + +    A  L   M ++    P   ++     ++C+LG+
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGR 190

Query: 151 VEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            +EA  L     R G      +Y  +I+ LC +  + EA  LL EM+  G   +V T+  
Sbjct: 191 ADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDD 250

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  +C +G V  +  ++ +M  +GC P + ++  LL+G     +  EA  +  R+    
Sbjct: 251 VVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL- 309

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              NVV ++T+I G  + G + EA  +   M    C P+  TYS L+ G  K G +  A 
Sbjct: 310 ---NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 366

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   M   G +PNVV YT ++   C+N M+    +L+E+M+ +    N+  +N  I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  GR+D AM L+ +M+   C P+I +YN ++  L    +++EA  +   + + G+  N 
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TYNTI+H + R G   +A +L  +M++ G  LD +++N +I A CK G V+ ++ LL+ 
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G   P+ +SY  L+  +C    +++A    ++MLN+G+ P+  T+N L+  L
Sbjct: 547 MAEKG-IKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 601



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 235/500 (47%), Gaps = 36/500 (7%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C  D +    + +  + V  +   F     +  R+G A++AL +   +   G  P   +Y
Sbjct: 154 CHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLY 213

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++ AL  +   +    + + M   G   +V T++ +++ +C   RV  A +L+  M  
Sbjct: 214 QTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMT 273

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-------------------------- 162
           KGC P  ++Y  ++  +C++ Q +EAR +  R                            
Sbjct: 274 KGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATEL 333

Query: 163 ----------SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                          Y+ L++GLCK  +I  A  LL EM  +G  PNV+TY+ ++ S C 
Sbjct: 334 YETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCK 393

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  + +  +L +M  +G   N   +  ++      GR  EA  L   M  +G  P++ +
Sbjct: 394 NGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICS 453

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+T+I+ LC+N  M+EA  +   + E     N  TY+ +I    + G    A ++   MI
Sbjct: 454 YNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMI 513

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +GCS +VV+Y  ++K +C++    ++  L+E+MA +   PN V++N  I  LC   RV 
Sbjct: 514 LHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVR 573

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  QM      P+I TYN L++GL ++  +  A  L+ ++    +  +I+TYN ++
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 633

Query: 453 HGVCRAGMVVEAFQLLGKML 472
              C+  ++ +A  LL + +
Sbjct: 634 SWHCKVRLLDDAAMLLNRAM 653



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 162/338 (47%), Gaps = 41/338 (12%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNL 321
           R G  P+  +Y+ ++  L       +A+++  +M   +  PP   T+        + G  
Sbjct: 132 RFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRA 191

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +   M  +GC P+ V Y  ++  LC      +A +L+ +M    C  +  TF+  
Sbjct: 192 DEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDV 251

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           ++G+CG GRV  A +L+D+M    C+P + TY  LL GL RV +  EA  ++  +     
Sbjct: 252 VRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP---- 307

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           +LN+V +NT++ G    G + EA +L   M ++G + DA T++I+++  CK G++ +A++
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 367

Query: 502 LLDRIRGGGEWNPDIISYT-----------------------------------SLLWGI 526
           LL  +   G + P++++YT                                    +++ +
Sbjct: 368 LLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           C  G M EA   +Q+M ++G  P+  ++N ++  L +N
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNN 464



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 6/126 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGV---SCSEGVFISVINSYRRVGLAEQALKMFYRIR 57
           +I+ + +   +D    LL++M  +G+   + S  + IS +   RRV     AL++  ++ 
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV---RDALELSKQML 583

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             GL P +  YN +++ L           +   +  + + P++ TYNIL+   CK   +D
Sbjct: 584 NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLD 643

Query: 118 GAYKLL 123
            A  LL
Sbjct: 644 DAAMLL 649


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 149/489 (30%), Positives = 246/489 (50%), Gaps = 6/489 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           E  + P    Y  ++D L    + +    ++  +   G+ P+   Y  L+  LC  N  D
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALI 172
            A +L  +M  +GC P  V+Y  ++ + CK G +EEA +L  +         V  YN ++
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +GLCK  ++EEA  L  EM   G  PN  +++TII  LC    ++ +  +  +M  +   
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  S+  L+ G    G+ +EA  L+ RM+  G  P+ V Y+ +IHG+C   ++DEA+ +
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M    C P+  T++ LID   K G L  A ++  RM  +G  P+VV Y+ ++  LC 
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A  L+E M    C P  VT NT I GLC  GR+  A ++LD M      P++ T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+ G  R  + + A EL++++   G+  N+VTY  ++ G+C+A  + EA  +  +M 
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   +  T+  +I  +C  G+V+  ++L   +   G  +PD + Y +L   +C SG  
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG-ISPDHVVYGTLAAELCKSGRS 481

Query: 533 QEAFIYLQK 541
             A   L++
Sbjct: 482 ARALEILRE 490



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 274/552 (49%), Gaps = 10/552 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +++  + L Q++   GV+ S   + S+I+        + A ++F  +   G
Sbjct: 16  LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+   YN ++DA            +   M  DG  P+V TYN ++  LCK++RV+ A 
Sbjct: 76  CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L  EM   GC P+  S+ TI+  +C+  ++++A ++     A         Y  LI+GL
Sbjct: 136 LLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGL 195

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K+ EA+ L   M+D GI P+ +TY+ +I  +C    ++ +L +   M  +GC P+ 
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  L+  +   G+  EA  L  RM  +G +P+VV YSTLI GLCS   +D+A  +   
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +  C P V T + LI G  KAG +  A ++ + M+S+G SP+VV Y  +V   C+   
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L+  M      PN VT+   + GLC   R+  A  +  QMK   C PN+ TY  
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL--GKMLI 473
           L+ G     +V    +L  E+   GI  + V Y T+   +C++G    A ++L  G+  +
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 495

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGM 532
                    +   +    + GK+  A+  + D +RGG    P+  +  SL+ G+C SG  
Sbjct: 496 RSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCA--SLVAGLCKSGQG 553

Query: 533 QEAFIYLQKMLN 544
            EA   L+++++
Sbjct: 554 GEARAVLEEIMD 565



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 139/438 (31%), Positives = 245/438 (55%), Gaps = 6/438 (1%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHK 180
           M  +  +PD+ SY  ++  + K G++ +AR L  +   SGV+     Y +LI+GLC  + 
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            ++A  L  +M  RG  P+ +TY+ +I + C  G +E +  ++ +M   G  P++ ++ +
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++ G     R  EA  L+N M R G  PN  +++T+I GLC    +D+A  V ++ME   
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
            PP+  +Y  LIDG AKAG L  A +++ RM+ +G +P+ V Y  ++  +C      +A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L + M  + C P+  TFN  I   C  G++D A +LL +M     +P++ TY+ L+ GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             + RV +A  L+ ++ K   +  +VT NT++HG+C+AG + EA ++L  M+  G   D 
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N +++ +C+ G+   A +LL  +   G   P++++YT+L+ G+C +  + EA     
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARG-LAPNVVTYTALVSGLCKANRLPEACGVFA 419

Query: 541 KMLNEGICPNFATWNVLV 558
           +M + G  PN  T+  L+
Sbjct: 420 QMKSSGCAPNLFTYTALI 437



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 249/476 (52%), Gaps = 6/476 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M    + P+ ++Y IL+  L K  +++ A  L  ++ + G  P  V+YT+++  +C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 151 VEEARELAM---RFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            ++AREL     R G   S   YN +I+  CK   +EEA  L+ +M++ G  P+V+TY+T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  LC    VE +L +  +M   GC PN  S  +++ G     +  +A  +++ M  + 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+  +Y  LI GL   G ++EA  +  +M ++   P+  TY+ +I G   A  L  A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++  M S GC P+   +  ++   C+     +A  L+++M  +   P+ VT++T I GL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   RVD A  LL+ M + +C P + T N L+ GL +  R+KEA E++  +   G   ++
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 360

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYNT++HG CRAG    A +LL  M+  G   + +T+  ++   CK  ++  A  +  +
Sbjct: 361 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 420

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++  G   P++ +YT+L+ G C++G +        +M+  GI P+   +  L   L
Sbjct: 421 MKSSG-CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 475


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 281/539 (52%), Gaps = 11/539 (2%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S + G F S  N+   V  A  +      IR     P V ++N +L +L+ +  +S +  
Sbjct: 34  SITNGGFCSNYNNLHSVADAVASFNQLLGIRPL---PPVVVFNKLLGSLVKKKHYSTVIS 90

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNR--VDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           +   M    + PNV+T  IL+  LC +NR  V  A+  L +M   G  P  V++ T+++ 
Sbjct: 91  LCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNG 150

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +C   ++ +A +L      M F   +  Y  +I GLCK      A  LL +M ++G  P+
Sbjct: 151 LCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPD 210

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+ Y+T+I SLC       ++    +M  +G  PN+ +++S+L G+   G+ +EA+ L+ 
Sbjct: 211 VVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFK 270

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           +MI    +PN V ++ L+ GLC  G + EA  V   M EN   P+  TYSAL+DG+    
Sbjct: 271 QMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQS 330

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A ++++ M+  G +P+V  Y  ++   C++   ++A +L+ +M   +  P+TVT++
Sbjct: 331 QMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYS 390

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T ++G C  GR   A KL  +M  Y  LP+  TY+ LLDGL +   + EAF L+  +++ 
Sbjct: 391 TLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQES 450

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
            I+ +I  YN ++ G+C  G +  A +L   + ++G +   +T+ ++I    K+G  N A
Sbjct: 451 KIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEA 510

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            ++  ++   G   P+  +Y   + G   +G    A   +++M+  G   + +T+ +L+
Sbjct: 511 CEMFRKMVVNGCL-PNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 217/413 (52%), Gaps = 6/413 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID V+ L  ++   G + S   + ++I    ++G    AL++  ++ E G KP V  YN 
Sbjct: 158 IDAVK-LFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNT 216

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D+L  + R +     +S M   G+ PNV TY+ +L   C   +++ A  L  +M  + 
Sbjct: 217 VIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRN 276

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAF 185
             P+ V++T +V  +CK G + EAR +  M   +GV      Y+AL++G C + +++EA 
Sbjct: 277 VMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQ 336

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L   MV +G  P+V  Y+ +I+  C    +  +  +L +M+ R   P+  ++++L++G+
Sbjct: 337 KLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGF 396

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR   A  L+  M   G LP+ + YS L+ GLC +G +DEA  +   M+E+   P++
Sbjct: 397 CQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHI 456

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             Y+ LI G    G L  A ++++ +   G  P+VV YT M+  L +  + ++A  +  K
Sbjct: 457 CIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRK 516

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           M    C PN+ T+N  I+G    G    A++L+++M       + +T+  LLD
Sbjct: 517 MVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 223/453 (49%), Gaps = 20/453 (4%)

Query: 132 APDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
           +P +++     S+   L  V +A     + L +R    V V+N L+  L K+        
Sbjct: 31  SPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVIS 90

Query: 187 LLCEMVDRGIDPNVITYSTIISSLC--DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           L  +M    I PNV T + +I+ LC  +  +V  +   LG+MF  G  P   +F +LL G
Sbjct: 91  LCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNG 150

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  +A  L++ + + GF P+++ Y+T+I GLC  G    A+ +  +MEE  C P+
Sbjct: 151 LCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPD 210

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V  Y+ +ID   K      A   ++ M+  G  PNVV Y+ ++   C     ++A SL +
Sbjct: 211 VVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFK 270

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M   N  PNTVTF   + GLC  G +  A ++ + M +    P+  TY+ L+DG    +
Sbjct: 271 QMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQS 330

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           ++ EA +L   +   G   ++  YN +++G C++  + EA  LL +M       D +T++
Sbjct: 331 QMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYS 390

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            ++  +C+ G+   A +L   +   G   PD I+Y+ LL G+C  G + EAF  L+ M  
Sbjct: 391 TLMQGFCQAGRPQVAQKLFKEMCSYGLL-PDSITYSILLDGLCKHGHLDEAFRLLKAMQE 449

Query: 545 EGICPNFATWNVLV------------RSLFSNL 565
             I P+   +N+L+            R LFSNL
Sbjct: 450 SKIEPHICIYNILIQGMCNFGKLEAARELFSNL 482



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 45/419 (10%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I P+ IT     S+  ++ +V  ++    Q+      P +  F  LL   +         
Sbjct: 30  ISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89

Query: 256 DLWNRMIREGFLPNVVAYS-------------------------------------TLIH 278
            L  +M      PNV   +                                     TL++
Sbjct: 90  SLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLN 149

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLCS   + +AV +  ++ +    P++ TY+ +I G  K G+   A Q+  +M   GC P
Sbjct: 150 GLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKP 209

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +VVAY  ++  LC++   ++A     +M  +  PPN VT+++ + G C  G+++ A  L 
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLF 269

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEA---FELVTEIEKCGIQLNIVTYNTILHGV 455
            QM     +PN  T+  L+DGL +   + EA   FE++TE    G++ +  TY+ ++ G 
Sbjct: 270 KQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE---NGVEPDAYTYSALMDGY 326

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C    + EA +L   M+ +G       +NI+I  +CK  ++N A  LL  +    +  PD
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMY-DRDLTPD 385

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
            ++Y++L+ G C +G  Q A    ++M + G+ P+  T+++L+  L  + GHL   + L
Sbjct: 386 TVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKH-GHLDEAFRL 443


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 163/530 (30%), Positives = 278/530 (52%), Gaps = 11/530 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G A +AL+    + EF + P V I+N ++  L  +        ++ NM+   ++P + 
Sbjct: 74  KAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIV 133

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEA---RE 156
           TYN ++  LCK+  ++ A +LL EM  KG   APD V+Y T++++  +  ++ EA   RE
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFRE 193

Query: 157 LAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                G    V   N L++G+CK+  +EEA  +L  M   G  P+VITY++II +LC  G
Sbjct: 194 KMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAG 253

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            V  +  IL  M    C+P++ +F +LL G+   G    A ++   M RE  LP+V+ Y+
Sbjct: 254 KVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 310

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L++GLC  G +  A  +  ++      P+V  Y++L+DG  K+G +  A ++   M   
Sbjct: 311 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GC   VV Y+ +V   C+    H+A  ++ +M   N  P   T+N  + GL   G +  A
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 430

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           + L+  +     +P++ TYN L+DGL + NRV+EA +L  E+   G   N VT  +++ G
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG 490

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +CR G V +A+ L+ +M  +    + + +  +I   CK  ++++A  +LD +RG G    
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALD 550

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           D  +Y  L+  + + G + EA     +M+  G  P+ +T   L  +  SN
Sbjct: 551 D-FAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 599



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 160/577 (27%), Positives = 282/577 (48%), Gaps = 57/577 (9%)

Query: 41  RRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           RR    + A++ F +   + G K  V  YNH+LD L+          +Y ++   G  PN
Sbjct: 2   RRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPN 61

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-- 157
           + T+ IL++  CK  +   A + L  +     APD   +  ++  + K G  ++A +L  
Sbjct: 62  LVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFE 121

Query: 158 ---AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISSLCD 212
              + R    +  YN +I+GLCK   +E+A  LL EM+ +G    P+++TY+T+I++   
Sbjct: 122 NMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              +  +     +M   G NP++ +   L+ G    G   EA ++ + M   G +P+V+ 
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM- 331
           Y+++IH LC  G + EA  +   M   SC P++ T++ L+DGF KAG L  A ++   M 
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 298

Query: 332 ----------------------------------ISNGCSPNVVAYTCMVKVLCQNNMFH 357
                                             +  G  P+V+AYT +V  LC++    
Sbjct: 299 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIE 358

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +AH L+++M+   C    V +++ + G C  G V  A ++L +M     +P + TYN +L
Sbjct: 359 EAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVL 418

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL++   + +A  L++++   G   ++VTYNT++ G+C+A  V EA  L  +M   G  
Sbjct: 419 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCF 478

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQL---LDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            + +T   +++  C+ G+V++A  L   + R R      P+++ YTSL+ G+C S  M +
Sbjct: 479 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA----PNVVVYTSLIDGLCKSDRMDD 534

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           A + L  M  +G+    A  +   R L  ++ H G V
Sbjct: 535 ACMVLDAMRGQGV----ALDDFAYRKLIVSMSHGGRV 567



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 241/475 (50%), Gaps = 4/475 (0%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK--PTVKIYN 69
           D    L + M+   V      + +VI+   + G  E+A ++   +   G K  P +  YN
Sbjct: 114 DQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYN 173

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A    +R          MK  G+ P+V T NIL+  +CK+  V+ A ++L  M   
Sbjct: 174 TLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLA 233

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           G  PD ++Y +I+ ++C  G+V EA E+   M     +  +N L++G CK   +  A  +
Sbjct: 234 GPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEV 293

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L EM    I P+VITY+ +++ LC VG V+ +  +L ++  +G  P++ ++TSL+ G   
Sbjct: 294 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 353

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   EA  L   M   G    VV YS+L+ G C  G++ +A  +  +M   +  P + T
Sbjct: 354 SGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFT 413

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ ++ G  K G++  A  + + +++ G  P+VV Y  ++  LC+ N   +A  L ++MA
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 473

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
              C PN VT  + + GLC  GRVD A  L+ +M +    PN+  Y  L+DGL + +R+ 
Sbjct: 474 SRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 533

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           +A  ++  +   G+ L+   Y  ++  +   G V EA  +  +M+  G   D  T
Sbjct: 534 DACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 213/421 (50%), Gaps = 6/421 (1%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           +   V  YN L++ L K         +  +++  G  PN++T+  +I   C  G    +L
Sbjct: 23  YKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRAL 82

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
             L  +      P+++ F  L+ G    G   +A  L+  M      P +V Y+T+I GL
Sbjct: 83  EFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGL 142

Query: 281 CSNGSMDEAVSVSYQM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           C +G++++A  +  +M  +     P++ TY+ LI+ F +A  +  A     +M + G +P
Sbjct: 143 CKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINP 202

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V+    +V  +C++    +A  +++ M      P+ +T+N+ I  LC  G+V  A ++L
Sbjct: 203 DVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEIL 262

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M    C P++ T+N LLDG  +   +  A E++ E+ +  I  +++TY  +++G+CR 
Sbjct: 263 KTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G V  AF LL +++ +G   D I +  ++   CK G++  A +L+  +   G     ++ 
Sbjct: 320 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG-CRTGVVM 378

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           Y+SL+ G C +G + +A   L +M++  + P   T+N+++  L  +      V ++ D++
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438

Query: 579 A 579
           A
Sbjct: 439 A 439



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 200/403 (49%), Gaps = 8/403 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++MK  G++        +++   + G  E+AL++   ++  G  P V  YN I+ AL   
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA 252

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I   M      P++ T+N LL   CK   +  A ++L EM  +   PD ++Y
Sbjct: 253 GKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 309

Query: 139 TTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           T +V+ +C++GQV+ A    E  +R G    V  Y +L++GLCK  +IEEA  L+ EM  
Sbjct: 310 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV 369

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           RG    V+ YS+++S  C  GNV  +  IL +M      P + ++  +L G +  G   +
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISK 429

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L + ++  G++P+VV Y+TLI GLC    + EA  ++ +M    C PN  T  +++ 
Sbjct: 430 AVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVF 489

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  + G +  A  +   M     +PNVV YT ++  LC+++    A  +++ M  +    
Sbjct: 490 GLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVAL 549

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           +   +   I  +   GRV  AM + D+M     LP+ +T   L
Sbjct: 550 DDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 592



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 186/382 (48%), Gaps = 8/382 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L  MK+ G       + S+I++    G   +A ++   ++     P +  +N +LD   
Sbjct: 226 ILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFC 282

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +   M R+ + P+V TY IL+  LC+  +V  A+ LL E+  +G  PD +
Sbjct: 283 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 342

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT++V  +CK G++EEA +L          +GV +Y++L++G C+   + +A  +L EM
Sbjct: 343 AYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEM 402

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V   + P + TY+ ++  L   G++  ++ ++  +  RG  P++ ++ +L+ G     R 
Sbjct: 403 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 462

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA DL + M   G  PN V   +++ GLC  G +D+A S+  +M      PNV  Y++L
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 522

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+  +  A  + + M   G + +  AY  ++  +       +A ++ ++M     
Sbjct: 523 IDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGF 582

Query: 372 PPNTVTFNTFIKGLCGCGRVDW 393
            P+  T  T  +        +W
Sbjct: 583 LPDGSTSKTLEEAAMSNSVFEW 604



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 126/239 (52%), Gaps = 5/239 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  EI+    L+++M V G      ++ S+++ Y R G   +A ++   +    
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN +L  L+ +   S    + S++   G  P+V TYN L+  LCK NRV  A 
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 466

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGL 175
            L  EM ++GC P+ V+  ++V  +C++G+V++A  L +     R    V VY +LI+GL
Sbjct: 467 DLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 526

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           CK  ++++A  +L  M  +G+  +   Y  +I S+   G V  ++ +  +M  RG  P+
Sbjct: 527 CKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 285/542 (52%), Gaps = 7/542 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+  +   +  ++N + R      AL +  ++ + G
Sbjct: 87  LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLG 146

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   + +L+      R S    +   M   G +P+  T+N L+  L  +N+   A 
Sbjct: 147 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAV 206

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            L+  M  +GC PD  +Y T+V+ +CK G ++ A  L  +   G     V +YN +I+GL
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++AF L  +M  +GI P+V TY+++IS LC+ G    +  +L  M  R  NPN+
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F SL+  +   G+  EA  L++ MI+    PN+V Y++LI+G C +  +DEA  +   
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P+V TY+ LI GF KA  +    +++  M   G   N V Y  +++ L Q   
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + +KM  +  PP+ +T++  + GLC  G+++ A+ + + +++ +  PNI TYN 
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNI 506

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ N++ Y T++ G CR G+  EA  L  +M  +G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 566

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           T  D+  +N +I A  + G    + +L+  +R  G       S  S++  + + G ++++
Sbjct: 567 TLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD--ASTISMVINMLHDGRLEKS 624

Query: 536 FI 537
           ++
Sbjct: 625 YL 626



 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 278/528 (52%), Gaps = 10/528 (1%)

Query: 42  RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           R GL+E     A+ +F  + +    P++  ++ +L A+   N+F ++  +   M+  G+ 
Sbjct: 54  RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            N +TY+ILL   C+ +++  A  +L +M   G  PD V+ +++++  C   ++ EA  L
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 158 A-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                 M +      +N LI+GL   +K  EA  L+  MV RG  P++ TY T+++ LC 
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G+++ +L +L +M       N+  + +++ G        +A DL+N+M  +G  P+V  
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y++LI  LC+ G   +A  +   M E    PNV T+++LID FAK G L+ A ++++ MI
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                PN+V Y  ++   C ++   +A  +   M  ++C P+ VT+NT IKG C   RV+
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVE 413

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             M+L  +M Q   + N  TYN L+ GL +      A ++  ++   G+  +I+TY+ +L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+ G + +A  +   +     + +  T+NI+I   CK GKV +   L   +   G  
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-V 532

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            P++I YT+++ G C  G  +EA    ++M  +G  P+   +N L+R+
Sbjct: 533 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 580



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 209/394 (53%), Gaps = 1/394 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           ++ L++ + K +K +    L  +M + GI  N  TYS +++  C    +  +L +LG+M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  EA  L ++M+  G+ P+ V ++TLIHGL  +    
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M    C P++ TY  +++G  K G++  A  +  +M       NVV Y  ++
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A  L  KM  +   P+  T+N+ I  LC  GR   A +LL  M + +  
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKIN 323

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D   +  ++ EA +L  E+ +  I  NIVTYN++++G C    + EA Q+
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D +T+N +I  +CK  +V   ++L   +   G    + ++Y +L+ G+ 
Sbjct: 384 FTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLF 442

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +G    A    +KM+++G+ P+  T+++L+  L
Sbjct: 443 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 476



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 203/390 (52%), Gaps = 2/390 (0%)

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NGL  E K+++A  L  EMV     P++I +S ++S++  +   +  + +  QM   G  
Sbjct: 55  NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N ++++ LL  +    +   A  +  +M++ G+ P++V  S+L++G C    + EAV++
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QM E    P+  T++ LI G         A  + +RM++ GC P++  Y  +V  LC+
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A SL++KM       N V +NT I GLC    +D A  L ++M+     P++ T
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+  L    R  +A  L++++ +  I  N+VT+N+++    + G ++EA +L  +M+
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
                 + +T+N +I  +C   +++ A Q+   +    +  PD+++Y +L+ G C +  +
Sbjct: 354 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIF-TLMVSKDCLPDVVTYNTLIKGFCKAKRV 412

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +E     ++M   G+  N  T+N L++ LF
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLIQGLF 442



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 86/190 (45%), Gaps = 36/190 (18%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++D A+ L  +M +    P+I  +++LL  + ++N+      L  +++  GI  N  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +L+                                    +C++ ++  A+ +L ++   
Sbjct: 121 ILLN-----------------------------------CFCRRSQLPLALAVLGKMMKL 145

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++ +SLL G C+   + EA   + +M+  G  P+  T+N L+  LF +     
Sbjct: 146 G-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASE 204

Query: 570 PVYILDDIMA 579
            V ++D ++A
Sbjct: 205 AVALIDRMVA 214


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 277/517 (53%), Gaps = 6/517 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  FYR+     +P+V  +   L +   + ++S +  + + M   G+  NV++ N+L
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS 163
           +  LC+ N VD A  +L +M   G  P A ++  +++ +C  G+++EA EL    +R G 
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189

Query: 164 GVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             +V  YN +INGLCK      A  +  +M   G  P+V+TY+TII SLC    V  ++ 
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
            L +M  RG  PN+ ++  ++ G+ + G+ +EA+ L+  M+    +P+ V  + L+ GLC
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M E    PN++TY+AL+DG+     +  A +++  MI  GC+P V 
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   C++    +A SL+ +M  +   P+TVT++T ++GLC  GR   A+ +  +M
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             Y  LPN+ TY+ LLDG  +   + EA +L+  +++  ++ NIV +  ++ G+  AG +
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A +L  K+  +G +    T+ ++I    K+G  + A  L  ++   G + P+  SY  
Sbjct: 490 EVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG-FLPNSCSYNV 548

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++ G   +     A   + +M+ +    N +T+ +L+
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 245/488 (50%), Gaps = 5/488 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
             +K +   V  L  QM + GV+ +      +IN   R+   + A+ +  ++ + G+ PT
Sbjct: 98  FAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPT 157

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              +N +++ L  E +      +++ M R G EPNV +YN ++  LCK      A  +  
Sbjct: 158 ASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFK 217

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEH 179
           +M   GC PD V+Y TI+ S+CK   V +A E L+     G+      YN +++G C   
Sbjct: 218 KMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILG 277

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++ EA  L  EMV R + P+ +T + ++  LC  G V  +  +   M  +G  PNI ++ 
Sbjct: 278 QLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYN 337

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+ GY L    +EA  ++  MIR+G  P V +Y+ LI+G C +  MDEA S+  +M   
Sbjct: 338 ALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHK 397

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +  P+  TYS L+ G  + G    A  I+  M S G  PN+V Y+ ++   C++    +A
Sbjct: 398 ALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEA 457

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L++ M  +   PN V     I+G+   G+++ A +L  ++      P I TY  ++ G
Sbjct: 458 LKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG 517

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           LL+     EA++L  ++E  G   N  +YN ++ G  +      A +L+ +M+ +    +
Sbjct: 518 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSAN 577

Query: 480 AITFNIII 487
             TF +++
Sbjct: 578 LSTFQMLL 585



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 209/389 (53%), Gaps = 5/389 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN   + G    A+ +F ++ + G KP V  YN I+D+L  +   +      S M   
Sbjct: 198 TIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR 257

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ PNVFTYN ++   C   +++ A +L  EM  +   PD V+ T +V  +CK G V EA
Sbjct: 258 GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEA 317

Query: 155 R---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           R   E     G    +S YNAL++G C +  + EA  +   M+ +G  P V +Y+ +I+ 
Sbjct: 318 RLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILING 377

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C    ++ +  +L +M+ +  NP+  ++++L++G    GR  EA +++  M   G LPN
Sbjct: 378 FCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPN 437

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V YS L+ G C +G +DEA+ +   M+E    PN+  ++ LI+G   AG L  A ++++
Sbjct: 438 LVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFS 497

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           ++ ++G  P +  YT M+K L +  +  +A+ L  KM  +   PN+ ++N  I+G     
Sbjct: 498 KLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQ 557

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLD 418
               A++L+D+M       N++T+  LLD
Sbjct: 558 DSSTAIRLIDEMVGKRFSANLSTFQMLLD 586


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 262/507 (51%), Gaps = 10/507 (1%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R F + P+ + YN +L  L   +  +    +Y  M RD + P  FT+ +  +ALC+  R 
Sbjct: 137 RRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRA 196

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNAL 171
             A  LL  M   GC PDAV Y T++ ++   G V EA       L M   + V+ +N +
Sbjct: 197 RDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDV 256

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GLC    + EA  L+  M+  G  P+V+TY  ++  LC     + +  +LG    R  
Sbjct: 257 VLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLG----RVP 312

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             N+    ++++G L  G+   A++L+  M  +G  P+V  Y+ L+HGLC  G    AV 
Sbjct: 313 EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVR 372

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +MEE  C PN+ TYS L+  F + G    A  + ++M + G S N   Y  ++  L 
Sbjct: 373 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALG 432

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           ++    +A  L+++M  + C P+  T+NT I  LC   ++D A  +   + +   + N  
Sbjct: 433 KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGI 492

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L+  LL   R +E   L  E+   G  L++V+YN ++  +C+ G V  +  LL +M
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           + +G K +  ++N++I   CK GKV +A++L   +   G   PDI++Y +L+ G+C  G 
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG-LTPDIVTYNTLINGLCKVGW 611

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLV 558
              A   L+K+ NE + P+  T+N+L+
Sbjct: 612 THAALNLLEKLPNENVHPDIVTYNILI 638



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 239/480 (49%), Gaps = 38/480 (7%)

Query: 119 AYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALI 172
           A  LL +M  +    P   SY  ++S++ +     +A     R L  R       +    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
             LC+  +  +A  LL  M   G  P+ + Y T+I +L   G V  +  +L +M + GC 
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++++F  ++ G    G   EA+ L +RM+  G  P+VV Y  L+ GLC     DEA ++
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 293 SYQMEE-------------------------------NSCPPNVTTYSALIDGFAKAGNL 321
             ++ E                                 CPP+V TY+ L+ G  K G  
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++ + M   GC+PN+V Y+ ++   C+N M+  A +++++M+ +    N+  +N  
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I  L   G++D AM+L+ +MK   C P+I TYN ++  L   +++ EA  +   + + G+
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N +TYNT++H +  +G   E  +L  +M++ G  LD +++N +I A CK+G V+ ++ 
Sbjct: 488 VANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL+ +   G   P+  SY  L+  +C +G +++A    ++MLN+G+ P+  T+N L+  L
Sbjct: 548 LLEEMMTKG-IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 241/521 (46%), Gaps = 37/521 (7%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C  D +  L ++M  + V  +   F     +  R+G A  AL +   +   G  P   +Y
Sbjct: 160 CHADAL-LLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLY 218

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++ AL+A+   +    +   M   G   +V T+N ++  LC    V  A +L+  M  
Sbjct: 219 QTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMM 278

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA-------------------------------REL 157
            GC P  V+Y  ++  +C+  Q +EA                                EL
Sbjct: 279 HGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATEL 338

Query: 158 AMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               GS      V  YN L++GLCK  +   A  +L EM ++G  PN++TYST++ S C 
Sbjct: 339 YEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCR 398

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  + +  +L QM  +G + N   +  ++      G+  EA  L   M  +G  P++  
Sbjct: 399 NGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+T+I+ LC+N  MDEA  +   + E     N  TY+ LI     +G      ++ N M+
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV 518

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +GC  +VV+Y  ++K LC+     ++  L+E+M  +   PN  ++N  I  LC  G+V 
Sbjct: 519 LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVR 578

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  +M      P+I TYN L++GL +V     A  L+ ++    +  +IVTYN ++
Sbjct: 579 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
              C+  ++ +A  LL K +  G   +  T+ +++  + +Q
Sbjct: 639 SWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 171/347 (49%), Gaps = 6/347 (1%)

Query: 219 SLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
           +L +L QM  R    P+  S+ ++L          +A  L+ RM+R+   P    +    
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC  G   +A+++   M  + C P+   Y  +I      G +  A+ + + M+  GC+
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            +V  +  +V  LC      +A  L+++M    C P+ VT+   ++GLC   + D A  +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L ++ +     N+   N ++ G L   ++  A EL   +   G   ++ TYN ++HG+C+
Sbjct: 308 LGRVPEV----NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G    A ++L +M  +G   + +T++ +++++C+ G  ++A  +LD++   G ++ +  
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG-FSMNSQ 422

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            Y  +++ +   G + EA   +Q+M ++G  P+  T+N ++  L +N
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN 469



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 152/310 (49%), Gaps = 6/310 (1%)

Query: 253 EASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            A  L ++M R     P+  +Y+ ++  L       +A+ +  +M  +  PP   T+   
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
                + G    A  +   M  +GC P+ V Y  ++  L       +A +L+++M    C
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +  TFN  + GLCG G V  A +L+D+M  + C P++ TY  LL GL R  +  EA+ 
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++  +     ++N+V  NT++ G    G +  A +L   M  +G   D  T+NI+++  C
Sbjct: 307 MLGRVP----EVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G+  +A+++LD +   G   P+I++Y++LL   C +G   +A   L +M  +G   N 
Sbjct: 363 KLGRCGSAVRMLDEMEEKG-CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNS 421

Query: 552 ATWNVLVRSL 561
             +N ++ +L
Sbjct: 422 QGYNGIIYAL 431



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 5/251 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG+  ++D    L+Q+MK +G       + ++I         ++A  +F  + E G
Sbjct: 427 IIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEG 486

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++ ALL   R+     + + M   G   +V +YN L+KALCK   VD + 
Sbjct: 487 VVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSM 546

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
            LL EM  KG  P+  SY  +++ +CK G+V +A EL+           +  YN LINGL
Sbjct: 547 MLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 606

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK      A  LL ++ +  + P+++TY+ +IS  C V  ++ +  +L +    G  PN 
Sbjct: 607 CKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNE 666

Query: 236 HSFTSLLKGYL 246
            ++  +++ ++
Sbjct: 667 RTWGMMVQNFV 677



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 69/147 (46%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++  +D    LL++M  +G+  +   +  +IN   + G    AL++   +   G
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P +  YN +++ L           +   +  + + P++ TYNIL+   CK   +D A 
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAS 651

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICK 147
            LL +  + G  P+  ++  +V +  +
Sbjct: 652 MLLDKAVSGGIVPNERTWGMMVQNFVR 678


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 170/570 (29%), Positives = 290/570 (50%), Gaps = 26/570 (4%)

Query: 17  LLQQMKVEGVSC--SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           L Q +K     C  S  VF  V+ S  RV L  +AL +    + +G  P V  YN ILDA
Sbjct: 117 LFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDA 176

Query: 75  LL-AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           ++  +    +   I+  M   G+ PNV+TYNIL++  C    ++       EM   GC P
Sbjct: 177 VIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLP 236

Query: 134 DAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
           + V+Y TI+ + CKL ++ EA    R +A++     +  YN +INGLC+E +++E   +L
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEIL 296

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM  R   P+ +T++T+I+  C+VGN   +L +  +M   G +PN+ ++T+L+      
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G  + A +  ++M   G  PN   Y+TLI G    G + +A  +  +M EN   P + TY
Sbjct: 357 GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +ALI+G    G +  AS +   MI  G  P+VV+Y+ ++   C+N    +A  L  +M  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+  T+++ I+GLC   R+     L  +M      P+  TY  L++       + +
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDK 536

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII- 487
           A  L  E+ + G   +IVTYN +++G  +     EA +LL K+L E +  + IT+N +I 
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596

Query: 488 --------------YAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGM 532
                           +C +G +N A ++L+  ++ G + N ++  Y  ++ G    G +
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV--YNVIIHGHSKVGNI 654

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++A+   ++ML+ G  P+  T   L +SL+
Sbjct: 655 EKAYNLYKEMLHSGFAPHSVTIMALAKSLY 684



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 170/581 (29%), Positives = 268/581 (46%), Gaps = 61/581 (10%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV     +  +VI + + V +AE    +F  + E G+ P V  YN ++          M 
Sbjct: 166 GVLSYNAILDAVIRTKQSVKIAE---GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
              +  M+R+G  PNV TYN ++ A CK  ++  A+KLL  M  KG  P+ +SY  +++ 
Sbjct: 223 LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +C+ GQ++E  E+       R+      +N LING C      +A  L  EMV  G+ PN
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY-------------- 245
           V+TY+T+I+S+C  GN+  ++  L QM  RG +PN  ++T+L+ G+              
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 246 ---------------------LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                                 + GR  +AS L   MI  GF+P+VV+YST+I G C N 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +++A  +  +M      P+V TYS+LI G  K   L     ++  M+S G  P+ V YT
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C      +A  L ++M  +   P+ VT+N  I G     R   A +LL ++   
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 405 ECLPNITTYNELLD---------------GLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           E +PN  TYN L+D               G      + EA  ++  + + G +LN   YN
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            I+HG  + G + +A+ L  +ML  G    ++T   +  +   +GK     QLLD     
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKS 702

Query: 510 GEWNPDIISYTSLLWGI-CNSGGMQEAFIYLQKMLNEGICP 549
                  ++   +L GI    G M   F  L+ M   G+ P
Sbjct: 703 CRITEAALA--KVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 212/420 (50%), Gaps = 3/420 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG-NVETSLG 221
           S  +V++ ++    + + I +A  ++      G  P V++Y+ I+ ++     +V+ + G
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  +M   G +PN++++  L++G+   G        +  M R G LPNVV Y+T+I   C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               + EA  +   M      PN+ +Y+ +I+G  + G +   S+I   M      P+ V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++   C    FHQA  L  +M      PN VT+ T I  +C  G ++ AM+ LDQM
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +     PN  TY  L+DG  +   +K+A++++ E+ + G    I+TYN +++G C  G +
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  LL +M+  G   D ++++ II  +C+  ++  A QL   +   G  +PD+ +Y+S
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG-ISPDVATYSS 488

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           L+ G+C    + E     Q+ML+ G+ P+  T+  L+ + +   G L     L D M  K
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA-YCIEGDLDKALRLHDEMIQK 547



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 31/328 (9%)

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y + I  LCS+G    A      +  +  P  +T  S+     A + NLL  SQ  + ++
Sbjct: 8   YYSSIFTLCSSGDALLADKAIVYLRRH--PEQLTLLSSHFTPQA-SSNLLLKSQFDSSLV 64

Query: 333 SN----GCSPNVVAYTC---MVKVLCQNNMFHQAHSLIE------------------KMA 367
                   S    ++ C    + +L +  ++  A SL E                  K +
Sbjct: 65  LKFLDWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNS 124

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR-V 426
           +  C  ++  F+  +K       ++ A+ +++  K Y  +P + +YN +LD ++R  + V
Sbjct: 125 YYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSV 184

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           K A  +  E+ + G+  N+ TYN ++ G C AG +       G+M   G   + +T+N I
Sbjct: 185 KIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTI 244

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I AYCK  K+  A +LL R+      NP++ISY  ++ G+C  G M+E    L++M    
Sbjct: 245 IDAYCKLRKIGEAFKLL-RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYIL 574
             P+  T+N L+   + N+G+     +L
Sbjct: 304 YVPDRVTFNTLING-YCNVGNFHQALVL 330


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 157/534 (29%), Positives = 269/534 (50%), Gaps = 35/534 (6%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++AL  F R+      P+V  +  IL ++     +S +  +   M   G+  +V+T  I+
Sbjct: 56  DEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIV 115

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           + + C  NRVD  + +L ++   G  PD  ++TT                          
Sbjct: 116 INSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTT-------------------------- 149

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
               LI GLC E KI EA  L  +MV  G  PN +TY T+I  LC VGN   ++ +L  M
Sbjct: 150 ----LIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSM 205

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             + C PN+ ++ +++       + +EA ++++ MI +G  PNV  Y+++IHGLC     
Sbjct: 206 VQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEW 265

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
               ++  +M ++   PNV  ++ L+D   K G +  A  + + MI  G  P+VV YT +
Sbjct: 266 KHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTAL 325

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C  +   +A  + + M  + C PN ++++T I G C   R+D AM L ++M Q E 
Sbjct: 326 MDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +PNI TYN L+ GL  V R+++A  L  E+   G   ++VTY  +L  +C+   + +A  
Sbjct: 386 VPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMA 445

Query: 467 LLGKMLIEGTKL--DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           +L    IEG+ L  D  ++NI+I   C+ G++  A  L   +   G  +PD+ +YT ++ 
Sbjct: 446 MLKA--IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG-LHPDVWTYTIMIN 502

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           G+C  G + EA    ++M  +G  P+  T+N++ R    N   L  + +L +++
Sbjct: 503 GLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEML 556



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 248/495 (50%), Gaps = 5/495 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L +QM   G+         VINS+  +   +    +  +I + G +P    +  ++ 
Sbjct: 93  VLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIR 152

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  E +      ++  M  +G +PN  TY  L+  LCK      A +LL  M  K C P
Sbjct: 153 GLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEP 212

Query: 134 DAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           + ++Y TI+  + K  QV EA       +A      VS YN++I+GLCK  + +    L+
Sbjct: 213 NVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLM 272

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EMVD  I PNV+ ++T++ +LC  G V  +  ++  M  RG  P++ ++T+L+ G+ L 
Sbjct: 273 NEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLR 332

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               EA  +++ M+R+G  PNV++YSTLI+G C    +D+A+ +  +M +    PN+ TY
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LI G    G L  A  +++ M+++G  P++V Y  ++  LC+     QA ++++ +  
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEG 452

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            N  P+  ++N  I G+C  G ++ A  L   +      P++ TY  +++GL     + E
Sbjct: 453 SNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAE 512

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A +L  E+   G   +  TYN I  G  R    + A QLL +ML  G   DA T  +I+ 
Sbjct: 513 ATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVE 572

Query: 489 AYCKQGKVNNAIQLL 503
                G   +  Q+L
Sbjct: 573 MLSDDGLDQSVKQIL 587



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 188/370 (50%), Gaps = 5/370 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +++    +  +M  +G+S +   + S+I+   +    +    +   + +  
Sbjct: 220 IIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK 279

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V I+  ++DAL  E   ++ + +   M + G+EP+V TY  L+   C  + +D A 
Sbjct: 280 IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEAD 339

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           K+   M  KGCAP+ +SY+T+++  CK+ ++++A     E+  R     +  YN LI+GL
Sbjct: 340 KVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGL 399

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ +A  L  EMV  G  P+++TY  ++  LC   +++ ++ +L  +      P+I
Sbjct: 400 CHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDI 459

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+  ++ G    G    A DL++ +  +G  P+V  Y+ +I+GLC  G + EA  +  +
Sbjct: 460 QSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFRE 519

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  + C P+  TY+ +  GF +    L A Q+   M+  G S +    T +V++L  + +
Sbjct: 520 MNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGL 579

Query: 356 FHQAHSLIEK 365
                 ++ +
Sbjct: 580 DQSVKQILHE 589



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 60/126 (47%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VI+   RVG  E A  +F  +   GL P V  Y  +++ L  +   +    ++  M  DG
Sbjct: 465 VIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDG 524

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+  TYN++ +   +NN    A +LL EM  +G + DA + T IV  +   G  +  +
Sbjct: 525 CSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVK 584

Query: 156 ELAMRF 161
           ++   F
Sbjct: 585 QILHEF 590


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 267/509 (52%), Gaps = 7/509 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  ++ AL A  R +    +  +M R G  P    Y++ L+A C+ +   GA 
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFG--SGVSVYNALING 174
            +L ++  +GCA D  +   ++ ++C  G V+EA    R+L   FG    V  YNA++ G
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC   +      L+ EMV  G  PN++T+ST+I  LC  G  E    +  QM   GC P+
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +  + +++ G     R   A  + NRM   G  PNVV Y+TL+ GLCS    +EA  +  
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +  CP +  T++ L+D   + G +    ++  +M+ +GC P+V+ YT ++   C+  
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +A  L+  MA   C PNTV++   +KGLC   R   A +L+ QM Q  C PN  T+N
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++ L +   V++A EL+ ++   G   ++++Y+T++ G+ +AG   EA +LL  M+ +
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKK 526

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + I ++ I  A   +G++N  IQ+ + I+       D + Y +++  +C  G    
Sbjct: 527 GMSPNTIIYSSIASALSGEGRINKVIQMFENIQ-DTTVRSDAVLYNAVISSLCKRGETDR 585

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  +L  M++ G  PN +T+ +L+R L S
Sbjct: 586 AIEFLAYMVSSGCVPNESTYTILIRGLAS 614



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 140/462 (30%), Positives = 234/462 (50%), Gaps = 39/462 (8%)

Query: 138 YTTIVSSICKLGQV--EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           Y  +V+  C+ GQ+        ++        Y  L+  LC   +I +A  +L +M  RG
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRG 141

Query: 196 IDPNVITYST-----------------------------------IISSLCDVGNVETSL 220
             P    Y                                     ++ ++CD G V+ ++
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201

Query: 221 GILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
            +L  +    GC P++ S+ ++L+G  +  R     DL   M+  G  PN+V +STLI  
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC NG  +    V  QM E+ C P+V  Y+ +IDG  K   L  A  I NRM S G SPN
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           VV Y  ++K LC  + + +A  L+ +M  ++CP + VTFN  +  LC  G VD  +++L+
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLE 381

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           QM ++ C+P++ TY  +++G  +   + EA  L+  +  CG + N V+Y  +L G+C A 
Sbjct: 382 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAE 441

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
             V+A +L+ +M+ +G   + +TFN +I   CK+G V  AI+LL ++   G  +PD+ISY
Sbjct: 442 RWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLISY 500

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++++ G+  +G   EA   L  M+ +G+ PN   ++ +  +L
Sbjct: 501 STVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 218/430 (50%), Gaps = 5/430 (1%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G EP+V +YN +L+ LC   R      L+ EM   GC P+ V+++T++  +C+ G  E  
Sbjct: 212 GCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERV 271

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E+  +         V +Y  +I+G+CKE ++E A  +L  M   G+ PNV+ Y+T++  
Sbjct: 272 HEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKG 331

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC     E + G+L +MF + C  +  +F  L+      G      ++  +M+  G +P+
Sbjct: 332 LCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPD 391

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G   A   + A ++ +
Sbjct: 392 VITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMS 451

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +MI  GC PN V +  ++  LC+  +  QA  L+++M    C P+ ++++T I GL   G
Sbjct: 452 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 511

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
             D A++LL+ M +    PN   Y+ +   L    R+ +  ++   I+   ++ + V YN
Sbjct: 512 NTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYN 571

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++  +C+ G    A + L  M+  G   +  T+ I+I     +G V  A ++L  +   
Sbjct: 572 AVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSK 631

Query: 510 GEWNPDIISY 519
           G     ++ +
Sbjct: 632 GALRKHLMKH 641



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 192/393 (48%), Gaps = 5/393 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           VQ L+++M   G   +   F ++I    R GL E+  ++  ++ E G  P V++Y  I+D
Sbjct: 236 VQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIID 295

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            +  E R  +   I + M   G+ PNV  YN LLK LC  +R + A  LL EM +K C  
Sbjct: 296 GVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPL 355

Query: 134 DAVSYTTIVSSICKLGQVE---EARELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLL 188
           D V++  +V  +C+ G V+   E  E  +  G    V  Y  +ING CKE  I+EA  LL
Sbjct: 356 DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M   G  PN ++Y+ ++  LC       +  ++ QM  +GC PN  +F +L+      
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 475

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A +L  +M+  G  P++++YST+I GL   G+ DEA+ +   M +    PN   Y
Sbjct: 476 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIY 535

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S++    +  G +    Q++  +       + V Y  ++  LC+     +A   +  M  
Sbjct: 536 SSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVS 595

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             C PN  T+   I+GL   G V  A ++L ++
Sbjct: 596 SGCVPNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 132/262 (50%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  +L+QM   G       + +VIN + + GL ++A+ +   +   G +P    Y  
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G  PN  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G  +EA EL  +    G+S    +Y+++ + L  E +I +  
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  +  + + Y+ +ISSLC  G  + ++  L  M   GC PN  ++T L++G 
Sbjct: 553 QMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGL 612

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA ++   +  +G L
Sbjct: 613 ASEGFVKEAQEILTELCSKGAL 634



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 7/294 (2%)

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ ++ G C  G +  A  ++  +      PN  TY  L+      G +  A  + + M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASV---PVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC+P    Y   ++  C+ + F  A  ++  +    C  +    N  ++ +C  G VD
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 393 WAMKLL-DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
            A++LL D +  + C P++ +YN +L GL    R     +L+ E+   G   NIVT++T+
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +  +CR G+     ++  +M   G   D   +  II   CK+ ++  A  +L+R+   G 
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG- 317

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP-NFATWNVLVRSLFSN 564
            +P+++ Y +LL G+C++   +EA   L +M ++  CP +  T+N+LV  L  N
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD-CPLDDVTFNILVDFLCQN 370


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 167/553 (30%), Positives = 274/553 (49%), Gaps = 54/553 (9%)

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G +  V  YN +L  L  E+R    + ++  M     +P+ FT+ ILL+ LC++N+++ 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           A KLL  M   GC PD   Y  ++S   K     +A +             V  Y  +++
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  +  +A  LL EM D+G  PN+ TY+ I+  LC+   ++ +  +L +M VRG  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++ S +KG     R  EA     RM      P+VV+Y+T+I+GLC +G +D A  + 
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M    C P+V TYS+LIDGF K G +  A  + + M+  GC PN+VAY  ++  L + 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  ++ +M      P+ V++N  I GLC   RV  A  + D+M +  C PN ++Y
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 414 NE----------LLDGLLRVNRVKEAFELVTEI--EKC---------------------- 439
           +           LLDGL +  R  EA  L +++  EK                       
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 417

Query: 440 -GIQL----------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
             +Q+          N+VT+N ++HG+C    + +A  +L  M+ EG   D +T+  ++ 
Sbjct: 418 KALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVD 477

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A CK GK   A++L +    GG   PD+++Y++L+ G+ +    +EA++   K++     
Sbjct: 478 AMCKCGKSAAALELFEEAVKGG-CVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWV 536

Query: 549 PNFATWNVLVRSL 561
           P+  T  +L R L
Sbjct: 537 PDDKTLGLLHRKL 549



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 245/476 (51%), Gaps = 14/476 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + LL +MK  G    + ++ ++I+ Y +     QA K    + +    PTV  Y 
Sbjct: 57  QLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYT 116

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           +I+D L    R      +   M+  G  PN++TYN++++ LC+  ++D A K+L EM  +
Sbjct: 117 NIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVR 176

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF--GSGVSVYNALINGLCKEHKIEEAFWL 187
           G  PD V+Y + +  +CK  +V+EAR+   R      V  Y  +INGLCK   ++ A  +
Sbjct: 177 GYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRM 236

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L  M +RG  P+V+TYS++I   C  G VE ++G+L  M   GC PN+ ++ SLL     
Sbjct: 237 LDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   +A D+   M R GF P+VV+Y+  I GLC    + +A +V  +M E  C PN ++
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356

Query: 308 YSALI----------DGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMF 356
           YS LI          DG  K G    A  ++++++    C P+V  Y  M+   C+    
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  + ++M  +NC  N VT+N  + GLC   R+  A  +L  M     +P+  TY  L
Sbjct: 417 DKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +D + +  +   A EL  E  K G   ++VTY+ ++ G+    M  EA+ L  K++
Sbjct: 476 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLV 531



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G + N+ TYN +L  + R     +A  +  +M+ +  + DA TF I++   C+  ++  A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +LL R++  G   PD   Y +L+ G   +    +AF +L +M+     P   T+  +V 
Sbjct: 62  RKLLGRMKEMG-CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 560 SLFSNLGHLGPVYILDDI 577
            L         V +LD++
Sbjct: 121 GLCKAERTRDAVKLLDEM 138


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 270/543 (49%), Gaps = 46/543 (8%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 88  CTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 140

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK---GCAPDAVSYT 139
            ++ +   M   G  PNVF+YNILLK LC  NR   A +LL  M +    G  PD VSYT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 140 TIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           T+                              ING  KE   ++A+    EM+DRGI P+
Sbjct: 201 TV------------------------------INGFFKEGDSDKAYSTYHEMLDRGILPD 230

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY++II++LC    ++ ++ +L  M   G  P+  ++ S+L GY   G+  EA     
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           +M  +G  P+VV YS L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L+    + + M+ NG  P+   ++ ++    +     QA  +  KM  +   PN VT+ 
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I  LC  GRV+ AM   +QM      P    YN L+ GL   N+ + A EL+ E+   
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI LN + +N+I+   C+ G V+E+ +L   M+  G K + IT+N +I  YC  GK++ A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           ++LL  +   G   P+ ++Y++L+ G C    M++A +  ++M + G+ P+  T+N++++
Sbjct: 531 MKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589

Query: 560 SLF 562
            LF
Sbjct: 590 GLF 592



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 261/535 (48%), Gaps = 6/535 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + +VIN + + G +++A   ++ + + G+ P V  YN I+ AL           + + M 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           ++G+ P+  TYN +L   C + +   A   L +M + G  PD V+Y+ ++  +CK G+  
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 153 EAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EAR++            ++ Y  L+ G   +  + E   LL  MV  GI P+   +S +I
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +    G V+ ++ +  +M  +G NPN  ++ +++      GR  +A   + +MI EG  
Sbjct: 379 CAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P  + Y++LIHGLC+    + A  +  +M +     N   ++++ID   K G ++ + ++
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M+  G  PNV+ Y  ++   C      +A  L+  M      PNTVT++T I G C 
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R++ A+ L  +M+     P+I TYN +L GL +  R   A EL   I + G Q+ + T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN ILHG+C+  +  +A Q+   + +   KL+A TFNI+I A  K G+ + A  L     
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             G   P+  +Y  +   I   G ++E       M + G   +    N +VR L 
Sbjct: 679 SNG-LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 255/516 (49%), Gaps = 9/516 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD---GMEPNVFTYNILLKALC 111
           R+ E G  P V  YN +L  L  ENR      +   M  D   G  P+V +Y  ++    
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS---- 166
           K    D AY    EM ++G  PD V+Y +I++++CK   +++A E L     +GV     
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN++++G C   + +EA   L +M   G++P+V+TYS ++  LC  G    +  I   M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG  P I ++ +LL+GY   G   E   L + M+R G  P+   +S LI      G +
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+ V  +M +    PN  TY A+I    K+G +  A   + +MI  G SP  + Y  +
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC  N + +A  LI +M       NT+ FN+ I   C  GRV  + KL + M +   
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ TYN L++G     ++ EA +L++ +   G++ N VTY+T+++G C+   + +A  
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M   G   D IT+NII+    +  +   A +L  RI   G    ++ +Y  +L G+
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGL 626

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           C +    +A    Q +    +     T+N+++ +L 
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/422 (30%), Positives = 219/422 (51%), Gaps = 14/422 (3%)

Query: 152 EEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVITY 203
           E+AR +    +R G G S+Y  N  +  + ++     A      M   G D   P++ TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRMI 262
             +I   C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSALIDGFAKAG 319
             G +PNV +Y+ L+ GLC      EA+ + + M ++     PP+V +Y+ +I+GF K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +   A   ++ M+  G  P+VV Y  ++  LC+     +A  ++  M      P+ +T+N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M+     P++ TY+ L+D L +  R  EA ++   + K 
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   D   F+I+I AY KQGKV+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NP+ ++Y +++  +C SG +++A +Y ++M++EG+ P    +N L+ 
Sbjct: 391 MLVFSKMRQQG-LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 560 SL 561
            L
Sbjct: 450 GL 451



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 255/551 (46%), Gaps = 21/551 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L  M   GV      + S+++ Y   G  ++A+    ++R  G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++D L    R      I+ +M + G++P + TY  LL+       +   +
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            LL  M   G  PD   ++ ++ +  K G+V++A  +   MR          Y A+I  L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+A     +M+D G+ P  I Y+++I  LC     E +  ++ +M  RG   N 
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S++  +   GR  E+  L+  M+R G  PNV+ Y+TLI+G C  G MDEA+ +   
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TYS LI+G+ K   +  A  ++  M S+G SP+++ Y  +++ L Q   
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT---- 411
              A  L  ++          T+N  + GLC     D A+    QM Q  CL ++     
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEAR 652

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+N ++D LL+V R  EA +L       G+  N  TY  +   +   G++ E  QL   M
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNA---IQLLDRIRGGGEWNPDIISYTSLLWGICN 528
              G  +D+   N I+    ++G++  A   + ++D      E      S  SL   + +
Sbjct: 713 EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA-----STASLFIDLLS 767

Query: 529 SGGMQEAFIYL 539
            G  QE + +L
Sbjct: 768 GGKYQEYYRFL 778



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 130/244 (53%), Gaps = 8/244 (3%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +P++  Y  ++   C+        + +  +  +    + + F   +KG
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV---TEIEKCG 440
           LC   R   AM + L +M +  C+PN+ +YN LL GL   NR +EA EL+    +    G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              ++V+Y T+++G  + G   +A+    +ML  G   D +T+N II A CK   ++ A+
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++L+ +   G   PD ++Y S+L G C+SG  +EA  +L+KM ++G+ P+  T+++L+  
Sbjct: 252 EVLNTMVKNGVM-PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 561 LFSN 564
           L  N
Sbjct: 311 LCKN 314


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 277/539 (51%), Gaps = 8/539 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  V   ++++Y++ G  + A ++   +R+ GL P+++  N +L  LL  +  +++  + 
Sbjct: 46  SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR 105

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             M   G+ P+V+TY+ L++A CK    D A K+LVEM  +GC  + V+Y  +++ +C+ 
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165

Query: 149 GQVEEA---RELAMRFG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
           G VEEA   ++    +G    G + Y ALINGLCK  +  EA  LL EM    + PNV+ 
Sbjct: 166 GAVEEAFGFKKDMEDYGLVPDGFT-YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 224

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+ +I      GN + +  ++ +M   G  PN  ++ +L++G    G+   AS L  +M+
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R+   P+ + Y+ +I G   + +  +A  +  +ME     PNV TYS +I G  ++G   
Sbjct: 285 RDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 344

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            AS +   M + G  PN   Y  ++   C+      A  + +KM   N  P+   +N+ I
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GL   GRV+ + K   QM++   LPN  TY+ L+ G L+   ++ A +LV  +   G++
Sbjct: 405 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 464

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N V Y  +L    ++  + +       ML +G  LD   + I+I+     G +  A ++
Sbjct: 465 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 524

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L  I   G   PD+  Y+SL+ G+C +   ++AF  L +M  +G+ PN   +N L+  L
Sbjct: 525 LSEIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 582



 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 280/563 (49%), Gaps = 7/563 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   +  E D  + +L +M+  G   +   +  +I    R G  E+A      + ++G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  +++ L    R +    +   M    ++PNV  Y  L+    +    D A+
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 242

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           K++ EM   G  P+ ++Y  +V  +CK+GQ++ A  L  +            YN +I G 
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            + H  ++AF LL EM + GI PNV TYS +I  LC  G  E +  +L +M  +G  PN 
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  L+ GY   G    A +++++M +   LP++  Y++LI GL   G ++E+     Q
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E    PN  TYS LI G+ K G+L  A Q+  RM+  G  PN V Y  +++   +++ 
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +  S  + M  +    +   +   I  L   G ++ A ++L ++++   +P++  Y+ 
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +    ++AF ++ E+ K G+  NIV YN ++ G+C++G +  A  +   +L +G
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + +T+  +I   CK G ++NA  L + +   G   PD   Y+ L  G  ++G +++A
Sbjct: 603 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG-ITPDAFVYSVLTTGCSSAGDLEQA 661

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
              +++M   G   + +++N LV
Sbjct: 662 MFLIEEMFLRGHA-SISSFNNLV 683



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/533 (24%), Positives = 248/533 (46%), Gaps = 28/533 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  G+S +   +  +I+   + G  E+A  +   +   GLKP   +Y  ++    
Sbjct: 314 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   S+   I+  M +  + P+++ YN L+  L K  RV+ + K   +M  +G  P+  
Sbjct: 374 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 433

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++    K G +E A +L  R   +G+     +Y  L+    K   IE+       M
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D+G+  +   Y  +I +L   GN+E +  +L ++   G  P++H ++SL+ G       
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  + + M ++G  PN+V Y+ LI GLC +G +  A +V   +      PN  TY++L
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G++  A  ++N M++ G +P+   Y+ +           QA  LIE+M F   
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRG 672

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +  +FN  + G C  G++   +KLL  +     +PN  T   ++ GL    ++ E   
Sbjct: 673 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 732

Query: 432 LVTEIE--------------------KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +  E++                    +  I L++V  + ++   C+ G + +A  L   +
Sbjct: 733 IFVELQQKTSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVI 790

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           + +   +   ++  I+   C++GK++ A+ LL  +   G   P +++   + W
Sbjct: 791 VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFW 843



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 22/347 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L     ++    +L +++  G      V+ S+I+   +    E+A  +   + + G
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++D L      S    +++++   G+ PN  TY  L+   CK   +  A+
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            L  EM   G  PDA  Y+ + +     G +E+A     E+ +R  + +S +N L++G C
Sbjct: 628 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFC 687

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  K++E   LL  ++ RG+ PN +T   IIS L + G +     I  ++  +       
Sbjct: 688 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 747

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
            F+S                L+  MI +G +P  V    +I   C  G++D+A+ +   +
Sbjct: 748 HFSS----------------LFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVI 790

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVA 342
              S P   ++Y A++D   + G L  A  +   M   G   P +VA
Sbjct: 791 VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 9/237 (3%)

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           +R +S+    +      +V    ++     A  ++  M      P+    N  +K L   
Sbjct: 36  HRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLL-- 93

Query: 389 GRVDWAMKLLDQMKQYEC----LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            R D AM LL +++++       P++ TY+ L++   +V     A +++ E+ + G  LN
Sbjct: 94  -RAD-AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLN 151

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            VTYN ++ G+CR+G V EAF     M   G   D  T+  +I   CK  + N A  LLD
Sbjct: 152 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 211

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +    E  P+++ Y +L+ G    G   EAF  +++M+  G+ PN  T++ LVR L
Sbjct: 212 EM-SCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 267


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 290/556 (52%), Gaps = 15/556 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++++ I +Y R G    A+  F R+  F   P    YN I+DAL+        + +Y  M
Sbjct: 55  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+ P++ T+ I L++ C   R   A +LL  + ++G    AV+Y T+V  +   G  
Sbjct: 115 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 170

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +AR+     L       ++ +N +++ LCK   + EA  LL +++ RG+  N+ TY+  
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 230

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC+ G +  ++ ++  M      P++ ++ +L++G        EA     RM+ +G 
Sbjct: 231 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+   Y+T+I G C    + EA  +          P+  TY +LI+G    G++  A +
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++N   + G  P++V Y  +VK LC   +   A  ++ +MA E C P+  T+N  I GLC
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409

Query: 387 GCGRVDWAMKLLDQ--MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
             G +  A  +++   MK Y  LP++ T+N L+DG  +  ++  A +LV  + + GI  +
Sbjct: 410 KMGNISDATVVMNDAIMKGY--LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            +TYN++L+G+C+AG V E  +   +M+++G   + IT+NI+I  +C+  K+  A +++ 
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++   G  +PD +S+ +L++G C +G ++ A++  QK+  +G      T+N L+ +    
Sbjct: 528 KMSQEG-LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586

Query: 565 LGHLGPVYILDDIMAN 580
           L       I D++++ 
Sbjct: 587 LNMHMAEKIFDEMLSK 602



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 216/419 (51%), Gaps = 9/419 (2%)

Query: 94  DGME----PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           DGM     P+V TYN L++ LCK +    A   L  M N+GC PD  +Y TI+   CK+ 
Sbjct: 248 DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS 307

Query: 150 QVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            V+EA EL        F      Y +LINGLC E  +E A  L  E   +GI P+++ Y+
Sbjct: 308 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 367

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++  LC  G +  +L ++ +M   GC+P+I ++  ++ G    G   +A+ + N  I +
Sbjct: 368 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 427

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G+LP+V  ++TLI G C    +D A+ +  +M E    P+  TY+++++G  KAG +   
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 487

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           ++ +  MI  GC PN + Y  +++  C++N   +A  +I KM+ E   P+ V+FNT I G
Sbjct: 488 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 547

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G ++ A  L  ++++        T+N L+        +  A ++  E+   G + +
Sbjct: 548 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
             TY  ++ G C+   V  A+  L +M+ +G      TF  +I +     +V  A+ ++
Sbjct: 608 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 666



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 213/434 (49%), Gaps = 6/434 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   +A+++   +R + + P V  YN ++  L  ++           M   G  P+ FTY
Sbjct: 238 GRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 296

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----A 158
           N ++   CK + V  A +LL +   KG  PD V+Y ++++ +C  G VE A EL     A
Sbjct: 297 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 356

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                 + VYN+L+ GLC +  I  A  ++ EM + G  P++ TY+ +I+ LC +GN+  
Sbjct: 357 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 416

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  ++    ++G  P++ +F +L+ GY    +   A  L  RM   G  P+ + Y+++++
Sbjct: 417 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 476

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G ++E      +M    C PN  TY+ LI+ F ++  +  AS++  +M   G  P
Sbjct: 477 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 536

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           + V++  ++   C+N     A+ L +K+  +       TFNT I    G   +  A K+ 
Sbjct: 537 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIF 596

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D+M       +  TY  L+DG  +   V  A+  + E+ K G   ++ T+  +++ +   
Sbjct: 597 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 656

Query: 459 GMVVEAFQLLGKML 472
             V +A  ++  M+
Sbjct: 657 HRVFQAVGIIHIMV 670



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 232/462 (50%), Gaps = 14/462 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K       + L++M  +G    +  + ++I+ Y ++ + ++A ++       G
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  +++ L AE        +++  +  G++P++  YN L+K LC    +  A 
Sbjct: 324 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 383

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           +++ EM  +GC PD  +Y  +++ +CK+G + +A     +  M+ +   V  +N LI+G 
Sbjct: 384 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 443

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++ A  L+  M + GI P+ ITY+++++ LC  G V        +M ++GC+PN 
Sbjct: 444 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 503

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L++ +    +  EAS +  +M +EG  P+ V+++TLI+G C NG ++ A  +  +
Sbjct: 504 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 563

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +EE        T++ LI  F+   N+  A +I++ M+S G   +   Y  ++   C+   
Sbjct: 564 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 623

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A+  + +M  +   P+  TF   I  L    RV  A+ ++  M +   +P      E
Sbjct: 624 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP------E 677

Query: 416 LLDGLLRVNRVKEAFE--LVTEIEKCGIQLNIVTYNTILHGV 455
           ++D +L  ++ + A    LV ++ K G  ++  TY  +  GV
Sbjct: 678 VVDTILNADKKEIAAPKILVEDLMKKG-HISYPTYEVLHEGV 718


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 296/572 (51%), Gaps = 8/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +IEKLG   + + ++ +L  M+   G    EGV++  + +Y R G  ++A+ +F R+  +
Sbjct: 46  VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PTV  YN I+  L+    F   + +Y  M+  G+ P+V+++ I +K+ CK +R   A
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSV----YNALING 174
            +LL  M ++GC  + V+Y T+V    +     E  EL  +   SGVS+    +N L+  
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRV 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+  ++E   LL +++ RG+ PN+ TY+  I  LC  G ++ ++ ++G +  +G  P+
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +L+ G     +  EA     +M+ EG  P+   Y+TLI G C  G +  A  +  
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
               N   P+  TY +LIDG    G    A  ++N  +  G  PNV+ Y  ++K L    
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A  L  +M+ +   P   TFN  + GLC  G V  A  L+  M      P+I T+N
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G     +++ A E++  +   G+  ++ TYN++L+G+C+     +  +    M+ +
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   +  TFNI++ + C+  K++ A+ LL+ ++     NPD +++ +L+ G C +G +  
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS-VNPDAVTFGTLIDGFCKNGDLDG 584

Query: 535 AFIYLQKMLNE-GICPNFATWNVLVRSLFSNL 565
           A+   +KM     +  +  T+N+++ +    L
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/562 (27%), Positives = 275/562 (48%), Gaps = 17/562 (3%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D    +  +M+  G++     F   + S+ +      AL++   +   G +  V  Y  
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++     EN  +    ++  M   G+   + T+N LL+ LCK   V    KLL ++  +G
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKIEEAF 185
             P+  +Y   +  +C+ G+++ A R +      G    V  YN LI GLCK  K +EA 
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L +MV+ G++P+  TY+T+I+  C  G V+ +  I+G     G  P+  ++ SL+ G 
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL 366

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G T+ A  L+N  + +G  PNV+ Y+TLI GL + G + EA  ++ +M E    P V
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ L++G  K G +  A  +   MIS G  P++  +  ++           A  +++ 
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+  T+N+ + GLC   + +  M+    M +  C PN+ T+N LL+ L R  +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA--ITF 483
           + EA  L+ E++   +  + VT+ T++ G C+ G +  A+ L  KM  E  K+ +   T+
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME-EAYKVSSSTPTY 605

Query: 484 NIIIYAYCKQGKVNNAIQL----LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           NIII+A+ ++  V  A +L    +DR  G     PD  +Y  ++ G C +G +   + +L
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLG-----PDGYTYRLMVDGFCKTGNVNLGYKFL 660

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
            +M+  G  P+  T   ++  L
Sbjct: 661 LEMMENGFIPSLTTLGRVINCL 682



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/539 (25%), Positives = 259/539 (48%), Gaps = 7/539 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G   +   + +V+  +       +  ++F ++   G+   +  +N +L  L 
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        +   + + G+ PN+FTYN+ ++ LC+   +DGA +++  +  +G  PD +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287

Query: 137 SYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++  +CK  + +EA   L      G+      YN LI G CK   ++ A  ++ + 
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G  P+  TY ++I  LC  G    +L +  +   +G  PN+  + +L+KG    G  
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L N M  +G +P V  ++ L++GLC  G + +A  +   M      P++ T++ L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G++    +  A +I + M+ NG  P+V  Y  ++  LC+ + F       + M  + C
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  TFN  ++ LC   ++D A+ LL++MK     P+  T+  L+DG  +   +  A+ 
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587

Query: 432 LVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           L  ++E+   +  +  TYN I+H       V  A +L  +M+      D  T+ +++  +
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           CK G VN   + L  +   G + P + +   ++  +C    + EA   + +M+ +G+ P
Sbjct: 648 CKTGNVNLGYKFLLEMMENG-FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 248/551 (45%), Gaps = 68/551 (12%)

Query: 48  QALKMFYRIR-EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD-GMEPNVFTYNI 105
           +AL+MF  +R E G K T+  Y  +++ L    +F  +  +  +M+ + G       Y  
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVG 81

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
            +K   +  +V  A  +   M    C P   SY  I+S +   G  ++A ++ MR     
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMR----- 136

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
                                    M DRGI P+V +++  + S C       +L +L  
Sbjct: 137 -------------------------MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNN 171

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +GC  N+ ++ +++ G+       E  +L+ +M+  G    +  ++ L+  LC  G 
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           + E   +  ++ +    PN+ TY+  I G  + G L GA ++   +I  G  P+V+ Y  
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+N+ F +A   + KM  E   P++ T+NT I G C  G V  A +++       
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +P+  TY  L+DGL        A  L  E    GI+ N++ YNT++ G+   GM++EA 
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411

Query: 466 QLLGK-----------------------------------MLIEGTKLDAITFNIIIYAY 490
           QL  +                                   M+ +G   D  TFNI+I+ Y
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             Q K+ NA+++LD +   G  +PD+ +Y SLL G+C +   ++     + M+ +G  PN
Sbjct: 472 STQLKMENALEILDVMLDNG-VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530

Query: 551 FATWNVLVRSL 561
             T+N+L+ SL
Sbjct: 531 LFTFNILLESL 541



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 41/506 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   GVS     F  ++    + G  ++  K+  ++ + G+ P +  YN  +  L 
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +   +   G +P+V TYN L+  LCKN++   A   L +M N+G  PD+ 
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T+++  CK G V+ A  +        F      Y +LI+GLC E +   A  L  E 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +GI PNVI Y+T+I  L + G +  +  +  +M  +G  P + +F  L+ G    G  
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L   MI +G+ P++  ++ LIHG  +   M+ A+ +   M +N   P+V TY++L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ++G  K        + +  M+  GC+PN+  +  +++ LC+     +A  L+E+M  ++ 
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY--------------------------- 404
            P+ VTF T I G C  G +D A  L  +M++                            
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622

Query: 405 --------ECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                    CL P+  TY  ++DG  +   V   ++ + E+ + G   ++ T   +++ +
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAI 481
           C    V EA  ++ +M+ +G   +A+
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 220/482 (45%), Gaps = 41/482 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +K ++   + LL ++   GV  +   +   I    + G  + A++M   + E G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN+++  L   ++F         M  +G+EP+ +TYN L+   CK   V  A 
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
           +++ +    G  PD  +Y +++  +C  G+   A  L     G G+     +YN LI GL
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG--------------------- 214
             +  I EA  L  EM ++G+ P V T++ +++ LC +G                     
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 215 --------------NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
                          +E +L IL  M   G +P+++++ SLL G     +  +  + +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+ +G  PN+  ++ L+  LC    +DEA+ +  +M+  S  P+  T+  LIDGF K G+
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 321 LLGASQIWNRMI-SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           L GA  ++ +M  +   S +   Y  ++    +      A  L ++M      P+  T+ 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + G C  G V+   K L +M +   +P++TT   +++ L   +RV EA  ++  + + 
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 440 GI 441
           G+
Sbjct: 702 GL 703



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 209/450 (46%), Gaps = 7/450 (1%)

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVS------VYNALINGLCKEHKIEEAFWLLCE 190
           +Y +++  +   G+ E   E+ +     V       VY   +    ++ K++EA  +   
Sbjct: 42  TYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M     +P V +Y+ I+S L D G  + +  +  +M  RG  P+++SFT  +K +    R
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            H A  L N M  +G   NVVAY T++ G        E   +  +M  +     ++T++ 
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+    K G++    ++ +++I  G  PN+  Y   ++ LCQ      A  ++  +  + 
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+N  I GLC   +   A   L +M      P+  TYN L+ G  +   V+ A 
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            +V +    G   +  TY +++ G+C  G    A  L  + L +G K + I +N +I   
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             QG +  A QL + +   G   P++ ++  L+ G+C  G + +A   ++ M+++G  P+
Sbjct: 402 SNQGMILEAAQLANEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             T+N+L+    + L     + ILD ++ N
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDN 490



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 205/461 (44%), Gaps = 51/461 (11%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L +M  EG+      + ++I  Y + G+ + A ++       G  P    Y  ++D L  
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           E   +    +++     G++PNV  YN L+K L     +  A +L  EM  KG  P+  +
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           +  +V+ +CK+G V +A  L     +  +   +  +N LI+G   + K+E A  +L  M+
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           D G+DP+V TY+++++ LC     E  +     M  +GC PN+ +F  LL+      +  
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE-----NSCP----- 302
           EA  L   M  +   P+ V + TLI G C NG +D A ++  +MEE     +S P     
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608

Query: 303 --------------------------PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                                     P+  TY  ++DGF K GN+    +    M+ NG 
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++     ++  LC  +  ++A  +I +M  +   P  V  NT    +C   + + A  
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NT----ICDVDKKEVAAP 722

Query: 397 --LLDQMKQYECLPNITTYNELLDGLL-RVNRVKEAFELVT 434
             +L+ + +  C+     Y  L DGL  +  R K+ F +V 
Sbjct: 723 KLVLEDLLKKSCI-TYYAYELLFDGLRDKRLRKKKGFTVVA 762



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 138/274 (50%), Gaps = 9/274 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G   + DG   L++ M  +G       F  +I+ Y      E AL++   + + G+ P
Sbjct: 438 KMGCVSDADG---LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  YN +L+ L   ++F  +   Y  M   G  PN+FT+NILL++LC+  ++D A  LL
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL------AMRFGSGVSVYNALINGLCK 177
            EM NK   PDAV++ T++   CK G ++ A  L      A +  S    YN +I+   +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTE 614

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           +  +  A  L  EMVDR + P+  TY  ++   C  GNV      L +M   G  P++ +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
              ++    +  R +EA+ + +RM+++G +P  V
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 164/639 (25%), Positives = 305/639 (47%), Gaps = 76/639 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCS-EGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I +L     +D V   L   +      S + ++++ I +Y R G    A+  F R+  F
Sbjct: 41  LIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDLF 100

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
              P    YN I+DAL+        + +Y  M   G+ P+  T+ + LK+ C   R   A
Sbjct: 101 ACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVA 160

Query: 120 YKLLVEMGNKGCA-----------------------------------PDAVSYTTIVSS 144
            +LL  +  +GC                                    PD  ++  ++ +
Sbjct: 161 LRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHA 220

Query: 145 ICKLGQVEEARE-LAMRFGSGVSVY----NALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +C+ G V E+   LA     G+S      N  I GLC++ ++EEA  L+ E +   + P+
Sbjct: 221 LCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV-ERMGAYVAPD 279

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY+T++  LC    V+ +   LG+M  +GC P+  ++ +++ GY   G   EA++L  
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             + +GF+P+ V Y +LI+GLC+ G ++ A+ +  + +     P++  Y++L+ G  + G
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +L A Q+ N M+  GC P++  Y  ++  LC+      A  ++     +   P+  TFN
Sbjct: 400 LILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 459

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I G C   ++D A++L+++M  Y   P++ TYN +L+GL +  + KE  E   E+   
Sbjct: 460 TLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK 519

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G + N +TYN ++   C+   + EA  ++ +M  +G   DA++FN +I+ +C+ G ++ A
Sbjct: 520 GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579

Query: 500 -------------------------------IQLLDRIRG---GGEWNPDIISYTSLLWG 525
                                          +Q+ ++I G      + PD+ +Y  L+ G
Sbjct: 580 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDG 639

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +C +  +  A+ +L +M+++G  P+ AT+  ++  L  N
Sbjct: 640 LCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMN 678



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 266/538 (49%), Gaps = 7/538 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ +   G       + +V+      G    A  +F  +    + P V  +N++L AL 
Sbjct: 163 LLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALC 222

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        + + + + GM  N FT NI ++ LC++ R++ A  L+  MG    APD V
Sbjct: 223 QKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVV 281

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +CK  +V+EA +   R  +   +     YN +I+G CK   ++EA  LL + 
Sbjct: 282 TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDA 341

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G  P+ +TY ++I+ LC  G++E +L +  +   +   P++  + SL+KG    G  
Sbjct: 342 VFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLI 401

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  + N M+ EG  P++  Y+ +I+GLC  G++ +A  V          P+V T++ L
Sbjct: 402 LHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTL 461

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+ K   L  A Q+  RM + G +P+V+ Y  ++  LC+     + +   E+M  + C
Sbjct: 462 IDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGC 521

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T+N  I+  C   +++ A  ++ +M Q   +P+  ++N L+ G  R   +  A+ 
Sbjct: 522 RPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYL 581

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  ++++ G      T+N ++        +  A ++ G+M+ +G K D  T+ I++   C
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLC 641

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           K   V+ A   L  +   G + P + ++  +L  +  +  + EA   +  M+  G+ P
Sbjct: 642 KAANVDRAYAHLAEMISKG-FVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 197/414 (47%), Gaps = 8/414 (1%)

Query: 150 QVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT--YSTII 207
             E + EL     S +  Y ALI  L    ++++    L       + P+ +   Y   I
Sbjct: 23  HAEPSSELT---ASTIPAYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASI 78

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +    G +  ++    +M +  C P   ++ +++   +      +A  ++ RM+  G  
Sbjct: 79  QAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVA 138

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+   ++  +   C  G    A+ +   + E  C      Y  ++ G    G+   A  +
Sbjct: 139 PDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHL 198

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M+     P+V  +  ++  LCQ     ++ +L+ K+       N  T N +I+GLC 
Sbjct: 199 FDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCE 258

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GR++ A+ L+++M  Y   P++ TYN L+ GL + ++V+EA + +  +   G   +  T
Sbjct: 259 DGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFT 317

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YNTI+ G C++GM+ EA +LL   + +G   D +T+  +I   C +G +  A++L +  +
Sbjct: 318 YNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQ 377

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              +  PD++ Y SL+ G+C  G +  A   + +M+ EG  P+  T+N+++  L
Sbjct: 378 -AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGL 430



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 67/200 (33%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++DG   L Q++  +G S +   F  +I +Y      + A K+F  +   G KP      
Sbjct: 575 DLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP------ 628

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
                                        +++TY IL+  LCK   VD AY  L EM +K
Sbjct: 629 -----------------------------DLYTYRILVDGLCKAANVDRAYAHLAEMISK 659

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  P                               ++ +  ++N L   H++ EA  ++ 
Sbjct: 660 GFVP------------------------------SMATFGRMLNLLAMNHRVSEAVAIIH 689

Query: 190 EMVDRGIDPNVITYSTIISS 209
            MV  G+ P V+   TI+S+
Sbjct: 690 IMVRMGVVPEVV--DTILST 707


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/586 (28%), Positives = 289/586 (49%), Gaps = 8/586 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   +  +++  + ++++M+  G S +   + ++I    R G  E+A      + ++G
Sbjct: 249 LIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYG 308

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  I++ L    R      +   M   G+ PNV  Y+ L+    +    D A+
Sbjct: 309 LVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAF 368

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           K++ EM   G  P+ ++Y  ++  +CKLG++  A  +  +     + +    YN +I G 
Sbjct: 369 KIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGH 428

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            ++H  EEAF LL EM   GI PNV TYS II+ LC +G  E + G+L QM   G  PN 
Sbjct: 429 LRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNA 488

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  L+ GY   G    A +   +M RE   P++  Y++LI GL + G MDEA+    +
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    PN  TY  LI G++ AGNL  A Q+ ++M+++G +PN   Y  +++   +++ 
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDN 608

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +  S ++ M  +   P+   +   I  L   G +  A+ +L  +++   +P+   Y  
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  +   +++A  L+ E+ K GI+  I  YN ++ G C++  +  A  +   ++ +G
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKG 728

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + +T+  +I  YCK G + +AI L + +   G   PD   Y+ L  G  NSG +Q+A
Sbjct: 729 LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG-VAPDAFVYSVLAAGCSNSGDLQQA 787

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
               ++M+  G     +++N LV   F   G L        +M +K
Sbjct: 788 LFITEEMIARGYA-IISSFNTLVHG-FCKRGKLQETVKFLHVMMDK 831



 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 277/533 (51%), Gaps = 8/533 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V   ++++Y++ G      ++   +++ GL P+++  N +L  LL  +   ++  +   M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +  G+ P+V+TY+ L++A CK   ++ A K++ EM   GC+ + V+Y T++  +C+ G +
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 152 EEA---RELAMRFG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           EEA   ++    +G    G + Y A+INGLCK  + ++A  LL EM   G+ PNV+ YST
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFT-YGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I      GN + +  I+ +M   G  PN  ++ +L++G    GR   AS +  +M + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           ++ + + Y+ +I G     + +EA  +  +M +    PNV TYS +I+G  + G    AS
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +  +MI++G  PN   Y  ++   C+   F  A   ++KM  EN  P+   +N+ I GL
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G++D A++  D+M +    PN  TY  L+ G      +++A +L+ ++   G+  N 
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             Y  IL G  ++  + +    L  ML +G   D   + I+I+     G +  A+ +L  
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I   G   PD + Y SL+ G C +  M++A   L +M  +GI P  + +N L+
Sbjct: 654 IEKNG-LVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALI 705



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 251/535 (46%), Gaps = 6/535 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+    +   D    ++++M   GV  ++  + ++I    ++G   +A ++  ++ + G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                  YN +++  L ++       + + M++ G+ PNV+TY+I++  LC+    + A 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
            LL +M   G  P+A  Y  ++S  C+ G    A E   +         +  YN+LI GL
Sbjct: 474 GLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGL 533

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               K++EA     EM+++G  PN  TY  +I      GN+E +  +L QM   G NPN 
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPND 593

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  +L+GY       + S     M+ +G +P+   Y  +IH L S+G M  AVSV   
Sbjct: 594 FIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSV 653

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +E+N   P+   Y +LI GF KA ++  A  + + M   G  P +  Y  ++   C+++ 
Sbjct: 654 IEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDD 713

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A ++   +  +  PPN VT+ T I G C  G +  A+ L ++M      P+   Y+ 
Sbjct: 714 ISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSV 773

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L  G      +++A  +  E+   G  + I ++NT++HG C+ G + E  + L  M+ + 
Sbjct: 774 LAAGCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKD 832

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
                +T   I+    + GK++ A  +   ++     + D    +SL   + N G
Sbjct: 833 IVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQG 887



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 212/402 (52%), Gaps = 2/402 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           V + L++   K  ++ +   ++  M D G+ P++   + ++  L     ++    + G M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G +P+++++++L++ Y        A  +   M   G   NVV Y+TLI GLC  G++
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA     +ME+    P+  TY A+I+G  K G    A  + + M   G  PNVV Y+ +
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +    +     +A  ++++M+     PN +T++  I+GLC  GR+  A ++L QM +   
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           + +  TYN +++G LR +  +EAF L+ E+ K GI  N+ TY+ I++G+C+ G    A  
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASG 474

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL +M+ +G K +A  +  +I  YC++G  + A + L ++       PD+  Y SL+ G+
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMT-RENLTPDLYCYNSLIIGL 533

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            N G M EA  Y  +ML +G  PN  T+  L+   +S  G+L
Sbjct: 534 SNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHG-YSMAGNL 574



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 238/503 (47%), Gaps = 24/503 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  G+S +   +  +IN   ++G +E+A  +  ++   GLKP   +Y  ++    
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E  FS+       M R+ + P+++ YN L+  L    ++D A +   EM  KG  P+  
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++      G +E+A +L  +   SG++    +Y  ++ G  K   +E+    L  M
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++G+ P+   Y  +I +L   G+++ ++ +L  +   G  P+   + SL+ G+      
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADM 679

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L + M ++G  P +  Y+ LI G C +  +  A ++   +     PPN  TY+ L
Sbjct: 680 EKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+ KAG++  A  ++N M++ G +P+   Y+ +      +    QA  + E+M     
Sbjct: 740 IDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY 799

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              + +FNT + G C  G++   +K L  M   + +P++ T   ++ GL    ++ EA  
Sbjct: 800 AIIS-SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHT 858

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG-TKLDAITFNIIIYAY 490
           +  E++    Q N    +T                L   M+ +G   LD I  + +I ++
Sbjct: 859 IFVELQ----QKNASHRDT-----------DHLSSLFTDMINQGLVPLDVI--HNMIQSH 901

Query: 491 CKQGKVNNAIQLLDRIRGGGEWN 513
           CKQG ++ A+ L D +   G  N
Sbjct: 902 CKQGYLDKALMLHDALVAKGRAN 924



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 176/409 (43%), Gaps = 55/409 (13%)

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           +W    +      P+   +  +  SLC  G    + G+L QM      P +   +S+   
Sbjct: 107 YWSRTRLAPSAPAPDAFAHLAV--SLCAAGLYPQANGLLDQMIRAYPTPPL-VLSSV--- 160

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R    SD   R          V    L+      G + +   V   M++    P+
Sbjct: 161 ----HRALSGSDQGRR---------PVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPS 207

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +   + L+    +A  L    ++   M   G SP+V  Y+ +++  C+      A  ++E
Sbjct: 208 LRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVE 267

Query: 365 KMAFENCPPNTVTFNTFIKGLCGC-----------------------------------G 389
           +M    C  N VT+NT I GLC                                     G
Sbjct: 268 EMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRG 327

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R D A  LLD+M     +PN+  Y+ L+DG +R     EAF++V E+   G+Q N +TY+
Sbjct: 328 RPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYD 387

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G+C+ G +  A ++L +M   G   D +T+N++I  + +Q     A  LL+ +R G
Sbjct: 388 NLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKG 447

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G  +P++ +Y+ ++ G+C  G  + A   L++M+ +G+ PN   +  L+
Sbjct: 448 G-ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLI 495



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 134/294 (45%), Gaps = 20/294 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L     +     +L  ++  G+     ++ S+I+ + +    E+A+ +   + + G
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  YN ++D     +  S    I++++   G+ PN  TY  L+   CK   +  A 
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            L  EM  +G APDA  Y+ + +     G +++A     E+  R  + +S +N L++G C
Sbjct: 754 DLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFC 813

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  K++E    L  M+D+ I P+++T   I+  L + G +  +  I              
Sbjct: 814 KRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTI-------------- 859

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            F  L +       T   S L+  MI +G +P  V ++ +I   C  G +D+A+
Sbjct: 860 -FVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKAL 911


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 276/534 (51%), Gaps = 9/534 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++  Y R G  E A ++   +    + P    Y  ++ AL A  R +    +   M R 
Sbjct: 95  AMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 151

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P    Y+++L+A C+      A ++L ++  +GCA D  +   ++++IC  G V+EA
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L     S      V  YNA++ GLC   +      L+ EMV     PN++T++T+IS 
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G  E    +L QM   GC P+I  + +++ G    G    A ++ NRM   G  PN
Sbjct: 272 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 331

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+TL+ GLCS    +E   +  +M +  CP +  T++ L+D F + G +    ++  
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 391

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M+  GC P+V+ YT ++   C+  +  +A  L++ M    C PNT+++   +KGLC   
Sbjct: 392 QMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 451

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R   A  L+ QM Q  C  N  T+N L++ L +   V++A EL+ ++   G   ++++Y+
Sbjct: 452 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 511

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T++ G+ +AG   EA +LL  M+ +G   + I ++ I  A  ++G++N  IQ+ D I+  
Sbjct: 512 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ-D 570

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
                D + Y +++  +C  G  + A  +L  M++ G  PN +T+ +L+R L S
Sbjct: 571 TTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 624



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 257/464 (55%), Gaps = 9/464 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELA 158
           YN ++   C+  +++ A +L   +      P+A +Y  +V ++C  G++ +A     E+ 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 159 MRFGSGVS-VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            R  + +  +Y+ ++   C+      A  +L ++  RG   +V   + +++++CD G+V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +L  +   GC P++ S+ ++LKG  +  R     +L   M+R    PN+V ++TLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC NG  +    V  QM E+ C P++  Y+ +IDG  K G+L  A +I NRM S G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  ++K LC    + +   L+ +M  ++CP + VTFN  +   C  G VD  ++L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+QM +  C+P++ TY  +++G  +   + EA  L+  +  CG + N ++Y  +L G+C 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           A   V+A  L+ +M+ +G  L+ ITFN +I   CK+G V  AI+LL ++   G  +PD+I
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLI 508

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SY++++ G+  +G   EA   L  M+N+G+ PN   ++ +  +L
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 235/503 (46%), Gaps = 30/503 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ +   G +   G    V+N+    G  ++AL +   +  FG +P V  YN +L  L 
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  +   M R    PN+ T+N L+  LC+N   +  +++L +M   GC PD  
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 298

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y TI                              I+G+CKE  +E A  +L  M   G+
Sbjct: 299 MYATI------------------------------IDGICKEGHLEVAHEILNRMPSYGL 328

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNV+ Y+T++  LC     E +  +L +MF + C  +  +F  L+  +   G      +
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L  +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            A   + A  + ++MI  GC  N + +  ++  LC+  +  QA  L+++M    C P+ +
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +++T I GL   G+ D A++LL+ M      PN   Y+ +   L R  R+ +  ++   I
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +   I+ + V YN ++  +C+ G    A + L  M+  G   +  T+ I+I     +G V
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 497 NNAIQLLDRIRGGGEWNPDIISY 519
             A ++L  +   G     ++ +
Sbjct: 629 KEAQEMLTELCSKGALRKHLMKH 651



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 187/358 (52%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ ++I+   + G  E A ++  R+  +GLKP V  YN +L 
Sbjct: 281 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 340

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + + M       +  T+NIL+   C+N  VD   +LL +M  +GC P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMP 400

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     A         Y  ++ GLC   +  +A  L+
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G   N IT++T+I+ LC  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 461 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 520

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G +++ + +   +++ +   +   Y
Sbjct: 521 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 580

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K G    A +    M+S+GC PN   YT +++ L       +A  ++ ++
Sbjct: 581 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM   G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G   N  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ +EA EL  +    G+S    +Y+++ + L +E +I +  
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  I  + + Y+ +ISSLC  G  E ++  L  M   GC PN  ++T L++G 
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA ++   +  +G L
Sbjct: 623 ASEGFVKEAQEMLTELCSKGAL 644



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 81/157 (51%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  ++    LL+QM V G S     + +VI+   + G  ++AL++   +   G
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IY+ I  AL  E R + +  ++ N++   +  +   YN ++ +LCK    + A 
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           + L  M + GC P+  +YT ++  +   G V+EA+E+
Sbjct: 598 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEM 634



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + D    LL  M  +G+S +  ++ S+ ++  R G   + ++MF  I++  
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L             + M   G  PN  TY IL++ L     V  A 
Sbjct: 573 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632

Query: 121 KLLVEMGNKG 130
           ++L E+ +KG
Sbjct: 633 EMLTELCSKG 642


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 266/540 (49%), Gaps = 11/540 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           GL + A++   R+RE  + P  +  NHIL  L  +    ++  ++  +      PNVFT+
Sbjct: 136 GLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTF 191

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRF 161
           NI++  LCK   +  A  L   M   GC PD V++ +++    K G+++E  +L   MR 
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251

Query: 162 G---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
               + V  YNALIN  CK  ++E A+     M   G+  NV+T+ST + + C  G V  
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ +  QM VRG   N  ++T L+ G    GR  +A  L + M+R+G   NVV Y+ L+ 
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC    + EA  V   ME+     N   Y+ LI G     N   A  + + M + G   
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL 431

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++  Y  +++ LC  +   +A SL+ KM      PN + + T +      G+V  A+ +L
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++      PN+ TY  L+DGL +   + EA     ++   G+  N+  Y  ++ G+C+ 
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + EA QL  +M+ +G  LD + +  ++  Y KQG +++A  L  ++   G    D+  
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG-LQLDLFC 610

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           YT  + G CN   M EA     +M+  GI P+ A +N L+ S +  LG+L     L D M
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI-SKYQKLGNLEEAISLQDEM 669



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 247/499 (49%), Gaps = 11/499 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V+ L +Q+    V      F  VI+   + G   +A  +F R++E G  P V  +N ++D
Sbjct: 176 VRRLFEQLPAPNVF----TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                     +  +   M+R G + +V TYN L+   CK  R++ AY     M  +G   
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV----YNALINGLCKEHKIEEAFWL 187
           + V+++T V + CK G V EA +L   MR   G+++    Y  LI+G CK  ++++A  L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRV-RGMALNEFTYTCLIDGTCKAGRLDDAIVL 350

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L EMV +G+  NV+TY+ ++  LC    V  +  +L  M   G   N   +T+L+ G+ +
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
              + +A  L + M  +G   ++  Y  LI GLC+   +DEA S+  +M+E+   PN   
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ ++D   K+G +  A  +  +++ +G  PNV+ Y  ++  LC+     +A S   KM 
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                PN   +   + GLC  G ++ A++L ++M       +   Y  LLDG L+   + 
Sbjct: 531 DLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +AF L  ++   G+QL++  Y   + G C   M+ EA ++  +M+  G   D   +N +I
Sbjct: 591 DAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650

Query: 488 YAYCKQGKVNNAIQLLDRI 506
             Y K G +  AI L D +
Sbjct: 651 SKYQKLGNLEEAISLQDEM 669



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 222/443 (50%), Gaps = 5/443 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+  E+D V+ L+++M+  G       + ++IN + + G  E A   F  ++  G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  ++  +DA   E        +++ M+  GM  N FTY  L+   CK  R+D A 
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM  +G   + V+YT +V  +CK  +V EA + L M   +GV     +Y  LI+G 
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                 E+A  LL EM ++G++ ++  Y  +I  LC+V  ++ +  +L +M   G  PN 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+++      G+  EA  +  +++  GF PNV+ Y  LI GLC  GS+DEA+S   +
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    PNV  Y+AL+DG  K G L  A Q++N M+  G S + V YT ++    +   
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H A +L  KM       +   +  FI G C    +  A ++  +M  +   P+   YN 
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 416 LLDGLLRVNRVKEAFELVTEIEK 438
           L+    ++  ++EA  L  E+E+
Sbjct: 649 LISKYQKLGNLEEAISLQDEMER 671



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 165/324 (50%), Gaps = 17/324 (5%)

Query: 250 RTHEAS---DLWNRMI-----REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           R H A+   DL +R       R   L +VV   TL+  L   G +D+AV    ++ E   
Sbjct: 96  RPHLAASLVDLLHRAALALGPRRSALASVV--DTLLSVLADRGLLDDAVRAVARVRELRV 153

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           PPN  T + ++   A+      + ++  R+     +PNV  +  ++  LC+     +A S
Sbjct: 154 PPNTRTCNHILLRLARD----RSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARS 209

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M    C P+ VTFN+ I G   CG +D   +L+++M++  C  ++ TYN L++   
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +  R++ A+     +++ G+  N+VT++T +   C+ G+V EA +L  +M + G  L+  
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           T+  +I   CK G++++AI LLD  +R G   N  +++YT L+ G+C    + EA   L+
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN--VVTYTVLVDGLCKERKVAEAEDVLR 387

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
            M   G+  N   +  L+   F N
Sbjct: 388 MMEKAGVRANELLYTTLIHGHFMN 411


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 266/540 (49%), Gaps = 11/540 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           GL + A++   R+RE  + P  +  NHIL  L  +    ++  ++  +      PNVFT+
Sbjct: 136 GLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTF 191

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRF 161
           NI++  LCK   +  A  L   M   GC PD V++ +++    K G+++E  +L   MR 
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251

Query: 162 G---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
               + V  YNALIN  CK  ++E A+     M   G+  NV+T+ST + + C  G V  
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ +  QM VRG   N  ++T L+ G    GR  +A  L + M+R+G   NVV Y+ L+ 
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC    + EA  V   ME+     N   Y+ LI G     N   A  + + M + G   
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLEL 431

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++  Y  +++ LC  +   +A SL+ KM      PN + + T +      G+V  A+ +L
Sbjct: 432 DISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAML 491

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++      PN+ TY  L+DGL +   + EA     ++   G+  N+  Y  ++ G+C+ 
Sbjct: 492 QKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKN 551

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + EA QL  +M+ +G  LD + +  ++  Y KQG +++A  L  ++   G    D+  
Sbjct: 552 GCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG-LQLDLFC 610

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           YT  + G CN   M EA     +M+  GI P+ A +N L+ S +  LG+L     L D M
Sbjct: 611 YTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI-SKYQKLGNLEEAISLQDEM 669



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 247/499 (49%), Gaps = 11/499 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V+ L +Q+    V      F  VI+   + G   +A  +F R++E G  P V  +N ++D
Sbjct: 176 VRRLFEQLPAPNVF----TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLID 231

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                     +  +   M+R G + +V TYN L+   CK  R++ AY     M  +G   
Sbjct: 232 GYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV----YNALINGLCKEHKIEEAFWL 187
           + V+++T V + CK G V EA +L   MR   G+++    Y  LI+G CK  ++++A  L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRV-RGMALNEFTYTCLIDGTCKAGRLDDAIVL 350

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L EMV +G+  NV+TY+ ++  LC    V  +  +L  M   G   N   +T+L+ G+ +
Sbjct: 351 LDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFM 410

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
              + +A  L + M  +G   ++  Y  LI GLC+   +DEA S+  +M+E+   PN   
Sbjct: 411 NKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYII 470

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ ++D   K+G +  A  +  +++ +G  PNV+ Y  ++  LC+     +A S   KM 
Sbjct: 471 YTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMR 530

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                PN   +   + GLC  G ++ A++L ++M       +   Y  LLDG L+   + 
Sbjct: 531 DLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLH 590

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +AF L  ++   G+QL++  Y   + G C   M+ EA ++  +M+  G   D   +N +I
Sbjct: 591 DAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650

Query: 488 YAYCKQGKVNNAIQLLDRI 506
             Y K G +  AI L D +
Sbjct: 651 SKYQKLGNLEEAISLQDEM 669



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 222/443 (50%), Gaps = 5/443 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+  E+D V+ L+++M+  G       + ++IN + + G  E A   F  ++  G
Sbjct: 229 LIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREG 288

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  ++  +DA   E        +++ M+  GM  N FTY  L+   CK  R+D A 
Sbjct: 289 VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM  +G   + V+YT +V  +CK  +V EA + L M   +GV     +Y  LI+G 
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                 E+A  LL EM ++G++ ++  Y  +I  LC+V  ++ +  +L +M   G  PN 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+++      G+  EA  +  +++  GF PNV+ Y  LI GLC  GS+DEA+S   +
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    PNV  Y+AL+DG  K G L  A Q++N M+  G S + V YT ++    +   
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H A +L  KM       +   +  FI G C    +  A ++  +M  +   P+   YN 
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 416 LLDGLLRVNRVKEAFELVTEIEK 438
           L+    ++  ++EA  L  E+E+
Sbjct: 649 LISKYQKLGNLEEAISLQDEMER 671



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 165/324 (50%), Gaps = 17/324 (5%)

Query: 250 RTHEAS---DLWNRMI-----REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           R H A+   DL +R       R   L +VV   TL+  L   G +D+AV    ++ E   
Sbjct: 96  RPHLAASLVDLLHRAALALGPRRSALASVV--DTLLSVLADRGLLDDAVRAVARVRELRV 153

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           PPN  T + ++   A+      + ++  R+     +PNV  +  ++  LC+     +A S
Sbjct: 154 PPNTRTCNHILLRLARD----RSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARS 209

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M    C P+ VTFN+ I G   CG +D   +L+++M++  C  ++ TYN L++   
Sbjct: 210 LFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFC 269

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +  R++ A+     +++ G+  N+VT++T +   C+ G+V EA +L  +M + G  L+  
Sbjct: 270 KFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEF 329

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           T+  +I   CK G++++AI LLD  +R G   N  +++YT L+ G+C    + EA   L+
Sbjct: 330 TYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN--VVTYTVLVDGLCKERKVAEAEDVLR 387

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
            M   G+  N   +  L+   F N
Sbjct: 388 MMEKAGVRANELLYTTLIHGHFMN 411


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 170/570 (29%), Positives = 290/570 (50%), Gaps = 26/570 (4%)

Query: 17  LLQQMKVEGVSC--SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           L Q +K     C  S  VF  V+ S  RV L  +AL +    + +G  P V  YN ILDA
Sbjct: 117 LFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDA 176

Query: 75  LL-AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           ++  +    +   I+  M   G+ PNV+TYNIL++  C    ++       EM   GC P
Sbjct: 177 VIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLP 236

Query: 134 DAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
           + V+Y TI+ + CKL ++ EA    R +A++     +  YN +INGLC+E +++E   +L
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEIL 296

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM  R   P+ +T++T+I+  C+VGN   +L +  +M   G +PN+ ++T+L+      
Sbjct: 297 EEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKA 356

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G  + A +  ++M   G  PN   Y+TLI G    G + +A  +  +M EN   P + TY
Sbjct: 357 GNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +ALI+G    G +  AS +   MI  G  P+VV+Y+ ++   C+N    +A  L  +M  
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+  T+++ I+GLC   R+     L  +M      P+  TY  L++       + +
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDK 536

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII- 487
           A  L  E+ + G   +IVTYN +++G  +     EA +LL K+L E +  + IT+N +I 
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596

Query: 488 --------------YAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGM 532
                           +C +G +N A ++L+  ++ G + N ++  Y  ++ G    G +
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV--YNVIIHGHSKVGNI 654

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++A+   ++ML+ G  P+  T   L +SL+
Sbjct: 655 EKAYNLYKEMLHSGFAPHSVTIMALAKSLY 684



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 170/581 (29%), Positives = 268/581 (46%), Gaps = 61/581 (10%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV     +  +VI + + V +AE    +F  + E G+ P V  YN ++          M 
Sbjct: 166 GVLSYNAILDAVIRTKQSVKIAE---GIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
              +  M+R+G  PNV TYN ++ A CK  ++  A+KLL  M  KG  P+ +SY  +++ 
Sbjct: 223 LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +C+ GQ++E  E+       R+      +N LING C      +A  L  EMV  G+ PN
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY-------------- 245
           V+TY+T+I+S+C  GN+  ++  L QM  RG +PN  ++T+L+ G+              
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 246 ---------------------LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                                 + GR  +AS L   MI  GF+P+VV+YST+I G C N 
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +++A  +  +M      P+V TYS+LI G  K   L     ++  M+S G  P+ V YT
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C      +A  L ++M  +   P+ VT+N  I G     R   A +LL ++   
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 405 ECLPNITTYNELLD---------------GLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           E +PN  TYN L+D               G      + EA  ++  + + G +LN   YN
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            I+HG  + G + +A+ L  +ML  G    ++T   +  +   +GK     QLLD     
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKS 702

Query: 510 GEWNPDIISYTSLLWGI-CNSGGMQEAFIYLQKMLNEGICP 549
                  ++   +L GI    G M   F  L+ M   G+ P
Sbjct: 703 CRITEAALA--KVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 212/420 (50%), Gaps = 3/420 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG-NVETSLG 221
           S  +V++ ++    + + I +A  ++      G  P V++Y+ I+ ++     +V+ + G
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  +M   G +PN++++  L++G+   G        +  M R G LPNVV Y+T+I   C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               + EA  +   M      PN+ +Y+ +I+G  + G +   S+I   M      P+ V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++   C    FHQA  L  +M      PN VT+ T I  +C  G ++ AM+ LDQM
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +     PN  TY  L+DG  +   +K+A++++ E+ + G    I+TYN +++G C  G +
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  LL +M+  G   D ++++ II  +C+  ++  A QL   +   G  +PD+ +Y+S
Sbjct: 430 EDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG-ISPDVATYSS 488

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           L+ G+C    + E     Q+ML+ G+ P+  T+  L+ + +   G L     L D M  K
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA-YCIEGDLDKALRLHDEMIQK 547



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 31/328 (9%)

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y + I  LCS+G    A      +  +  P  +T  S+     A + NLL  SQ  + ++
Sbjct: 8   YYSSIFTLCSSGDALLADKAIVYLRRH--PEQLTLLSSHFTPQA-SSNLLLKSQFDSSLV 64

Query: 333 SN----GCSPNVVAYTC---MVKVLCQNNMFHQAHSLIE------------------KMA 367
                   S    ++ C    + +L +  ++  A SL E                  K +
Sbjct: 65  LKFLDWARSQQFFSFQCKCLALHILTRYKLYKTAQSLAEEVVVNTVDETGEDLFQCLKNS 124

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR-V 426
           +  C  ++  F+  +K       ++ A+ +++  K Y  +P + +YN +LD ++R  + V
Sbjct: 125 YYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSV 184

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           K A  +  E+ + G+  N+ TYN ++ G C AG +       G+M   G   + +T+N I
Sbjct: 185 KIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTI 244

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I AYCK  K+  A +LL R+      NP++ISY  ++ G+C  G M+E    L++M    
Sbjct: 245 IDAYCKLRKIGEAFKLL-RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYIL 574
             P+  T+N L+   + N+G+     +L
Sbjct: 304 YVPDRVTFNTLING-YCNVGNFHQALVL 330


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 173/627 (27%), Positives = 301/627 (48%), Gaps = 77/627 (12%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYNHIL 72
           V  ++  M+ +  +CSE V +S I +Y +  + +QAL +F  + + FG  P ++ +N +L
Sbjct: 62  VGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSML 121

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           +A +  N++      ++  +  GM PN+ TYNIL+K  CK  + +    LL  M   G  
Sbjct: 122 NAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLN 181

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL----------------------AMRFGS------- 163
           PD +SY T+++++ K G + +A EL                       +R G        
Sbjct: 182 PDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEI 241

Query: 164 ------------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                        V  YN +INGLCK  K++E+  +   M      P++ T+S++I  L 
Sbjct: 242 WKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLS 301

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             GN   +  +  +M   G +P++ ++ ++L G    G+ ++  +LWN M +     N+V
Sbjct: 302 KAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIV 360

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           +Y+ LI GL  N  +++A+     + E     + TTY  LI+G  K G L  A +I    
Sbjct: 361 SYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEA 420

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            + G   +  AY+ MV  LC+  M  QA  LI +M       N+  FN+ I G     ++
Sbjct: 421 ENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKL 480

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A+ +L +MK  +C P + +YN +++GL +  R  +A+  + E+ + G++ +++TY+ +
Sbjct: 481 EEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLL 540

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR---- 507
           + G+CR   V  A  L  + + +  K D    NIII+  C   KV+ A+++  ++R    
Sbjct: 541 IDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600

Query: 508 ---------------GGGE-------WN--------PDIISYTSLLWGICNSGGMQEAFI 537
                            G+       W+        PDIISY     G+C+   + +A  
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIE 660

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
           +L   L+ GI PN  TWNVLVR++  +
Sbjct: 661 FLYDALDRGILPNAPTWNVLVRAVVDD 687



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 215/460 (46%), Gaps = 74/460 (16%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  ++D    +  +MK    S     F S+I+   + G    A K+F  + E G
Sbjct: 261 MINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESG 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRD-------------------------- 94
           L P V+ YN +L  L    + +    +++ M ++                          
Sbjct: 321 LSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAIC 380

Query: 95  --------GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
                   G++ +  TY +L+  LCKN  ++ A ++L E  N+G   D  +Y+++V  +C
Sbjct: 381 YWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLC 440

Query: 147 KLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G +E+A EL  +           V+N+LING  +  K+EEA  +L EM  +   P V+
Sbjct: 441 KKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVV 500

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           +Y+TII+ LC       +   L +M   G  P++ +++ L+ G   G +   A +LW++ 
Sbjct: 501 SYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQC 560

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I +   P++  ++ +IHGLC+   +D A+ +  QM + +C P++ T++ +++G  KAG+ 
Sbjct: 561 INKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDC 620

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
           + A +IW+R++  G  P++++Y                                +TF   
Sbjct: 621 VEALKIWDRILEAGLQPDIISY-------------------------------NITF--- 646

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            KGLC C RV  A++ L        LPN  T+N L+  ++
Sbjct: 647 -KGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVV 685



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 133/277 (48%), Gaps = 5/277 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++ + EG       + S+++   + G+ EQA+++ +++++   K    ++N +++  +
Sbjct: 416 ILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYV 475

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +   MK     P V +YN ++  LCK  R   AY  L EM  +G  PD +
Sbjct: 476 RAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMI 535

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++  +C+  +V+ A  L       R    + ++N +I+GLC   K++ A  +  +M
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 P+++T++TI+  L   G+   +L I  ++   G  P+I S+    KG     R 
Sbjct: 596 RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARV 655

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            +A +     +  G LPN   ++ L+  +  +  + E
Sbjct: 656 SDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 171/543 (31%), Positives = 269/543 (49%), Gaps = 46/543 (8%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 88  CTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 140

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK---GCAPDAVSYT 139
            ++ +   M   G  PNVF+YNILLK LC  NR   A +LL  M +    G  PD VSYT
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 140 TIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           T+                              ING  KE   ++A+    EM+DRGI P+
Sbjct: 201 TV------------------------------INGFFKEGDSDKAYSTYHEMLDRGILPD 230

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY++II++LC    ++ ++ +L  M   G  P+  ++ S+L GY   G+  EA     
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           +M  +G  P+VV YS L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L+    + + M+ NG  P+   ++ ++          QA  +  KM  +   PN VT+ 
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYG 410

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I  LC  GRV+ AM   +QM      P    YN L+ GL   N+ + A EL+ E+   
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI LN + +N+I+   C+ G V+E+ +L   M+  G K + IT+N +I  YC  GK++ A
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           ++LL  +   G   P+ ++Y++L+ G C    M++A +  ++M + G+ P+  T+N++++
Sbjct: 531 MKLLSGMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 589

Query: 560 SLF 562
            LF
Sbjct: 590 GLF 592



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 262/535 (48%), Gaps = 6/535 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + +VIN + + G +++A   ++ + + G+ P V  YN I+ AL           + + M 
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           ++G+ P+  TYN +L   C + +   A   L +M + G  PD V+Y+ ++  +CK G+  
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318

Query: 153 EAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EAR++            ++ Y  L+ G   +  + E   LL  MV  GI P+   +S +I
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +  + G V+ ++ +  +M  +G NPN  ++ +++      GR  +A   + +MI EG  
Sbjct: 379 CAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS 438

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P  + Y++LIHGLC+    + A  +  +M +     N   ++++ID   K G ++ + ++
Sbjct: 439 PGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 498

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M+  G  PNV+ Y  ++   C      +A  L+  M      PNTVT++T I G C 
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCK 558

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R++ A+ L  +M+     P+I TYN +L GL +  R   A EL   I + G Q+ + T
Sbjct: 559 ISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELST 618

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN ILHG+C+  +  +A Q+   + +   KL+A TFNI+I A  K G+ + A  L     
Sbjct: 619 YNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             G   P+  +Y  +   I   G ++E       M + G   +    N +VR L 
Sbjct: 679 SNG-LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 732



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/516 (30%), Positives = 256/516 (49%), Gaps = 9/516 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD---GMEPNVFTYNILLKALC 111
           R+ E G  P V  YN +L  L  ENR      +   M  D   G  P+V +Y  ++    
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFF 207

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS---- 166
           K    D AY    EM ++G  PD V+Y +I++++CK   +++A E L     +GV     
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN++++G C   + +EA   L +M   G++P+V+TYS ++  LC  G    +  I   M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG  P I ++ +LL+GY   G   E   L + M+R G  P+   +S LI    + G +
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKV 387

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+ V  +M +    PN  TY A+I    K+G +  A   + +MI  G SP  + Y  +
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC  N + +A  LI +M       NT+ FN+ I   C  GRV  + KL + M +   
Sbjct: 448 IHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGV 507

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ TYN L++G     ++ EA +L++ +   G++ N VTY+T+++G C+   + +A  
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M   G   D IT+NII+    +  +   A +L  RI   G    ++ +Y  +L G+
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG-TQIELSTYNIILHGL 626

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           C +    +A    Q +    +     T+N+++ +L 
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 218/422 (51%), Gaps = 14/422 (3%)

Query: 152 EEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVITY 203
           E+AR +    +R G G S+Y  N  +  + ++     A      M   G D   P++ TY
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSP-AAAVSRYNRMARAGADEVTPDLCTY 90

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRMI 262
             +I   C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM 
Sbjct: 91  GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSALIDGFAKAG 319
             G +PNV +Y+ L+ GLC      EA+ + + M ++     PP+V +Y+ +I+GF K G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +   A   ++ M+  G  P+VV Y  ++  LC+     +A  ++  M      P+ +T+N
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M+     P++ TY+ L+D L +  R  EA ++   + K 
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   D   F+I+I AY  QGKV+ A
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQA 390

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NP+ ++Y +++  +C SG +++A +Y ++M++EG+ P    +N L+ 
Sbjct: 391 MLVFSKMRQQG-LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 560 SL 561
            L
Sbjct: 450 GL 451



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 254/551 (46%), Gaps = 21/551 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L  M   GV      + S+++ Y   G  ++A+    ++R  G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++D L    R      I+ +M + G++P + TY  LL+       +   +
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            LL  M   G  PD   ++ ++ +    G+V++A  +   MR          Y A+I  L
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+A     +M+D G+ P  I Y+++I  LC     E +  ++ +M  RG   N 
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S++  +   GR  E+  L+  M+R G  PNV+ Y+TLI+G C  G MDEA+ +   
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TYS LI+G+ K   +  A  ++  M S+G SP+++ Y  +++ L Q   
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT---- 411
              A  L  ++          T+N  + GLC     D A+    QM Q  CL ++     
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL----QMFQNLCLMDLKLEAR 652

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+N ++D LL+V R  EA +L       G+  N  TY  +   +   G++ E  QL   M
Sbjct: 653 TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNA---IQLLDRIRGGGEWNPDIISYTSLLWGICN 528
              G  +D+   N I+    ++G++  A   + ++D      E      S  SL   + +
Sbjct: 713 EDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA-----STASLFIDLLS 767

Query: 529 SGGMQEAFIYL 539
            G  QE + +L
Sbjct: 768 GGKYQEYYRFL 778



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 130/244 (53%), Gaps = 8/244 (3%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +P++  Y  ++   C+        + +  +  +    + + F   +KG
Sbjct: 72  YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV---TEIEKCG 440
           LC   R   AM + L +M +  C+PN+ +YN LL GL   NR +EA EL+    +    G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              ++V+Y T+++G  + G   +A+    +ML  G   D +T+N II A CK   ++ A+
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++L+ +   G   PD ++Y S+L G C+SG  +EA  +L+KM ++G+ P+  T+++L+  
Sbjct: 252 EVLNTMVKNGVM-PDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310

Query: 561 LFSN 564
           L  N
Sbjct: 311 LCKN 314


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/539 (29%), Positives = 277/539 (51%), Gaps = 8/539 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  V   ++++Y++ G  + A ++   +R+ G+ P+++  N +L  LL  +  +++  + 
Sbjct: 173 SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVR 232

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             M   G+ P+V+TY+ L++A CK    D A K+LVEM  +GC  + V+Y  +++ +C+ 
Sbjct: 233 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 292

Query: 149 GQVEEA---RELAMRFG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
           G VEEA   ++    +G    G + Y ALINGLCK  +  EA  LL EM    + PNV+ 
Sbjct: 293 GAVEEAFGFKKDMEDYGLVPDGFT-YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 351

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+ +I      GN + +  ++ +M   G  PN  ++ +L++G    G+   AS L  +M+
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R+   P+ + Y+ +I G   + S  +A  +  +ME     PNV TYS +I G  ++G   
Sbjct: 412 RDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPE 471

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            AS +   M + G  PN   Y  ++   C+      A  + +KM   N  P+   +N+ I
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GL   GRV+ + K   QM++   LPN  TY+ L+ G L+   ++ A +LV  +   G++
Sbjct: 532 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 591

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N V Y  +L    ++  + +       ML +G  LD   + I+I+     G +  A ++
Sbjct: 592 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 651

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L  I   G   PD+  Y+SL+ G+C +   ++AF  L +M  +G+ PN   +N L+  L
Sbjct: 652 LSGIEKNGSV-PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 709



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/563 (27%), Positives = 279/563 (49%), Gaps = 7/563 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   +  E D  + +L +M+  G   +   +  +I    R G  E+A      + ++G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  +++ L    R +    +   M    ++PNV  Y  L+    +    D A+
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 369

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           K++ EM   G  P+ ++Y  +V  +CK+GQ++ A  L  +            YN +I G 
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            + H  ++AF LL EM + GI PNV TYS +I  LC  G  E +  +L +M  +G  PN 
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  L+ GY   G    A +++++M +   LP++  Y++LI GL   G ++E+     Q
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E    PN  TYS LI G+ K G+L  A Q+  RM+  G  PN V Y  +++   +++ 
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +  S  + M  +    +   +   I  L   G ++ A ++L  +++   +P++  Y+ 
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +    ++AF ++ E+ K G+  NIV YN ++ G+C++G +  A  +   +L +G
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + +T+  +I   CK G ++NA  L + +   G   PD   Y+ L  G  ++G +++A
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG-ITPDAFVYSVLTTGCSSAGDLEQA 788

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
              +++M   G   + +++N LV
Sbjct: 789 MFLIEEMFLRGHA-SISSFNNLV 810



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 260/554 (46%), Gaps = 26/554 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  G+S +   +  +I+   + G  E+A  +   +   GLKP   +Y  ++    
Sbjct: 441 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   S+   I+  M +  + P+++ YN L+  L K  RV+ + K   +M  +G  P+  
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 560

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++    K G +E A +L  R   +G+     +Y  L+    K   IE+       M
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D+G+  +   Y  +I +L   GN+E +  +L  +   G  P++H ++SL+ G       
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  + + M ++G  PN+V Y+ LI GLC +G +  A +V   +      PN  TY++L
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G++  A  ++N M++ G +P+   Y+ +           QA  LIE+M F   
Sbjct: 741 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRG 799

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +  +FN  + G C  G++   +KLL  +     +PN  T   ++ GL    ++ E   
Sbjct: 800 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 859

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  E+++   +     ++++   +   G +                LD +  + +I  +C
Sbjct: 860 IFVELQQKTSESAARHFSSLFMDMINQGKI---------------PLDVV--DDMIRDHC 902

Query: 492 KQGKVNNAIQLLDRIRGGGEWNP-DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           K+G ++ A+ L D I    +  P    SY +++  +C  G + EA   L++M   GICP+
Sbjct: 903 KEGNLDKALMLRDVIV--AKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPS 960

Query: 551 FATWNVLVRSLFSN 564
                +L+ +L ++
Sbjct: 961 ENQCLILLTNLHTS 974



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 151/343 (44%), Gaps = 21/343 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L     ++    +L  ++  G      V+ S+I+   +    E+A  +   + + G
Sbjct: 635 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 694

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++D L      S    +++++   G+ PN  TY  L+   CK   +  A+
Sbjct: 695 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 754

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            L  EM   G  PDA  Y+ + +     G +E+A     E+ +R  + +S +N L++G C
Sbjct: 755 YLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFC 814

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  K++E   LL  ++ RG+ PN +T   IIS L + G +     I  ++  +       
Sbjct: 815 KRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAAR 874

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
            F+S                L+  MI +G +P  V    +I   C  G++D+A+ +   +
Sbjct: 875 HFSS----------------LFMDMINQGKIPLDVV-DDMIRDHCKEGNLDKALMLRDVI 917

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
              S P   ++Y A++D   + G L  A  +   M   G  P+
Sbjct: 918 VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPS 960



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/303 (20%), Positives = 114/303 (37%), Gaps = 57/303 (18%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M  +GV  +   + ++I+   + G    A  +F  I   GL P    Y  ++D   
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNIL------------------------------ 106
                S    +Y+ M   G+ P+ F Y++L                              
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISS 805

Query: 107 ----LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
               +   CK  ++    KLL  +  +G  P+A++   I+S + + G++ E   +     
Sbjct: 806 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 865

Query: 158 -------AMRFGS-----------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                  A  F S            + V + +I   CKE  +++A  L   +V +     
Sbjct: 866 QKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMG 925

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             +Y  I+ +LC  G +  +L +L +M  RG  P+ +    LL      G   E + + +
Sbjct: 926 CSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTVLD 985

Query: 260 RMI 262
            M+
Sbjct: 986 NML 988


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 160/528 (30%), Positives = 275/528 (52%), Gaps = 24/528 (4%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           +QAL++F  +      P    YN ++       +      ++S+MK  G+ PN  T N L
Sbjct: 14  DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 73

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELAM 159
           L  LC+  ++  A KL  EM      P + S+  ++      G+V +A       R+ + 
Sbjct: 74  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSS 133

Query: 160 RFGSGVSVYNALINGLCKEHK----IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              +G   YN ++ GLC E+K    +E+A     EM   G++P++ +Y  ++S+L D G 
Sbjct: 134 SVATGT--YNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGR 191

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  +  +   M    C+P+I ++  L+ GY   G+T+EA  L   +++ G+ PNV  YS 
Sbjct: 192 MAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSI 248

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +I+  C    ++EA  V  +M E++C PN  T++ LI GF KAG L  A +++  M   G
Sbjct: 249 IINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIG 308

Query: 336 CSPNVVAYTCMVKVLCQNNM-FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           C   +V Y  ++  LC+     + A  L  K+      P  VT+N+ I+G C   R+  A
Sbjct: 309 CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEA 368

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           M+  D+M + +C PN+ TY+ L+DGL +V R+KEA + + +++  G    +VTY  +++G
Sbjct: 369 MQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLING 427

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+ G +  A     KM + G   + + FN +I   CK  + N+ ++LL  +   G   P
Sbjct: 428 FCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG-CKP 486

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
           D+I+Y  L+ G+C++  +++A    Q++ +   C PN  T+N L+R L
Sbjct: 487 DVITYNCLISGLCSANRVEDA----QRLFDGMACAPNVTTFNFLIRGL 530



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 236/495 (47%), Gaps = 11/495 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +   MK  G+  +     +++     +G    ALK+F  ++     PT   +N +L    
Sbjct: 54  VFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFF 113

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC----KNNRVDGAYKLLVEMGNKGCA 132
              R         +M++        TYN++LK LC      NR++ A +   EM   G  
Sbjct: 114 MAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           PD  SY  ++S++   G++ EA  L  AM     +  YN L++G CK  +  EA  L+ E
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           ++  G +PNV TYS II+  C +  VE +  +  +M    C PN  +F +L+ G+   G 
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSN-GSMDEAVSVSYQMEENSCPPNVTTYS 309
             +A  L+  M + G    +V Y+TLI  LC   G +  AV +  ++E     P + TY+
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +LI GF  A  L  A Q ++ M    C+PNV+ Y+ ++  LC+     +A   +E M   
Sbjct: 354 SLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAH 412

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P  VT+   I G C CG +  A+   ++MK   C PN   +N L+DGL +  R  + 
Sbjct: 413 GYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDG 472

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L+  +   G + +++TYN ++ G+C A  V +A +L   M       +  TFN +I  
Sbjct: 473 LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRG 529

Query: 490 YCKQGKVNNAIQLLD 504
            C Q KV  A  +LD
Sbjct: 530 LCAQKKVEEARNILD 544



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 206/399 (51%), Gaps = 12/399 (3%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           NAL++GL    K ++A  L  E++     PN  TY+ +I   C  G +  ++ +   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  PN  +  +LL G    G+   A  L+  M    FLP   +++ L+ G    G + +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGF----AKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           A++    M ++S      TY+ ++ G       A  L  A + +  M ++G  P++ +Y 
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  L  +    +AH+L   M    C P+ +T+N  + G C  G+   A  L+ ++ + 
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+ TY+ +++   ++++V+EA+E+  ++ +     N VT+NT++ G C+AGM+ +A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQ-GKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
            +L  +M   G K   +T+N +I + CK+ G V  A+ L +++ G G   P I++Y SL+
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG-LTPTIVTYNSLI 356

Query: 524 WGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
            G C++  + EA  Y  +M  EG C PN  T+++L+  L
Sbjct: 357 QGFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGL 393



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 161/333 (48%), Gaps = 12/333 (3%)

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +LL G +   +  +A  L+  ++   F PN   Y+ LI G C  G M +AVSV   M+ +
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PN +T + L+ G  + G +  A +++  M +    P   ++  +++          A
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLC----GCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            + ++ M   +    T T+N  +KGLC       R++ AM+   +MK     P++ +Y+ 
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           LL  L    R+ EA  L + +       +I+TYN ++ G C+ G   EA  L+ ++L  G
Sbjct: 182 LLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQ 533
            + +  T++III  YCK  KV  A ++  ++    E N  P+ +++ +L+ G C +G ++
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI---ESNCVPNAVTFNTLIAGFCKAGMLE 295

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           +A     +M   G      T+N L+ SL    G
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRG 328



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 160/331 (48%), Gaps = 11/331 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G+  E    Q L++++   G   +   +  +IN Y ++   E+A ++F ++ E    P
Sbjct: 220 KIGQTYE---AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVP 276

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN-RVDGAYKL 122
               +N ++              +++ M++ G +  + TYN L+ +LCK    V  A  L
Sbjct: 277 NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDL 336

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKE 178
             ++   G  P  V+Y +++   C   ++ EA     E+  +    V  Y+ LI+GLCK 
Sbjct: 337 FNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKV 396

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +++EA   L +M   G  P V+TY  +I+  C  G ++++L    +M + GC PN   F
Sbjct: 397 RRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIF 456

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G     R ++   L   M  EG  P+V+ Y+ LI GLCS   +++A  +   M  
Sbjct: 457 NTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM-- 514

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            +C PNVTT++ LI G      +  A  I +
Sbjct: 515 -ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 277/534 (51%), Gaps = 9/534 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++  Y R G  E A ++   +    + P    Y  ++ AL A  R +    +   M R 
Sbjct: 132 AMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 188

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P    Y+++L+A C+      A ++L ++  +GCA D  +   ++++IC  G V+EA
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L     S      V  YNA++ GLC   +      L+ EMV     PN++T++T+IS 
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 308

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G  E    +L QM   GC P+I  + +++ G    G    A ++ NRM   G  PN
Sbjct: 309 LCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPN 368

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+TL+ GLCS    +E   +  +M +  CP +  T++ L+D F + G +    ++  
Sbjct: 369 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 428

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M+ +GC P+V+ YT ++   C+  +  +A  L++ M    C PNT+++   +KGLC   
Sbjct: 429 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 488

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R   A  L+ QM Q  C  N  T+N L++ L +   V++A EL+ ++   G   ++++Y+
Sbjct: 489 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 548

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T++ G+ +AG   EA +LL  M+ +G   + I ++ I  A  ++G++N  IQ+ D I+  
Sbjct: 549 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ-D 607

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
                D + Y +++  +C  G  + A  +L  M++ G  PN +T+ +L+R L S
Sbjct: 608 TTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 661



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 258/464 (55%), Gaps = 9/464 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELA 158
           YN ++   C+  +++ A +L   +      P+A +Y  +V ++C  G++ +A     E+ 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 159 MRFGSGVS-VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            R  + +  +Y+ ++   C+      A  +L ++  RG   +V   + +++++CD G+V+
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +L  +   GC P++ S+ ++LKG  +  R     +L   M+R    PN+V ++TLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC NG  +    V  QM E+ C P++  Y+ +IDG  K G+L  A +I NRM S G  
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  ++K LC    + +   L+ +M  ++CP + VTFN  +   C  G VD  ++L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+QM ++ C+P++ TY  +++G  +   + EA  L+  +  CG + N ++Y  +L G+C 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           A   V+A  L+ +M+ +G  L+ ITFN +I   CK+G V  AI+LL ++   G  +PD+I
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLI 545

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SY++++ G+  +G   EA   L  M+N+G+ PN   ++ +  +L
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 235/503 (46%), Gaps = 30/503 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ +   G +   G    V+N+    G  ++AL +   +  FG +P V  YN +L  L 
Sbjct: 216 VLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLC 275

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  +   M R    PN+ T+N L+  LC+N   +  +++L +M   GC PD  
Sbjct: 276 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR 335

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y TI                              I+G+CKE  +E A  +L  M   G+
Sbjct: 336 MYATI------------------------------IDGICKEGHLEVAHEILNRMPSYGL 365

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNV+ Y+T++  LC     E +  +L +MF + C  +  +F  L+  +   G      +
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L  +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            A   + A  + ++MI  GC  N + +  ++  LC+  +  QA  L+++M    C P+ +
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +++T I GL   G+ D A++LL+ M      PN   Y+ +   L R  R+ +  ++   I
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +   I+ + V YN ++  +C+ G    A + L  M+  G   +  T+ I+I     +G V
Sbjct: 606 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 665

Query: 497 NNAIQLLDRIRGGGEWNPDIISY 519
             A ++L  +   G     ++ +
Sbjct: 666 KEAQEMLTELCSKGALRKHLMKH 688



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 186/358 (51%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ ++I+   + G  E A ++  R+  +GLKP V  YN +L 
Sbjct: 318 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 377

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + + M       +  T+NIL+   C+N  VD   +LL +M   GC P
Sbjct: 378 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 437

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     A         Y  ++ GLC   +  +A  L+
Sbjct: 438 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 497

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G   N IT++T+I+ LC  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 498 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 557

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G +++ + +   +++ +   +   Y
Sbjct: 558 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 617

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K G    A +    M+S+GC PN   YT +++ L       +A  ++ ++
Sbjct: 618 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 675



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 133/262 (50%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM   G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G   N  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 480 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 539

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ +EA EL  +    G+S    +Y+++ + L +E +I +  
Sbjct: 540 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 599

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  I  + + Y+ +ISSLC  G  E ++  L  M   GC PN  ++T L++G 
Sbjct: 600 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 659

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA ++   +  +G L
Sbjct: 660 ASEGFVKEAQEMLTELCSKGAL 681



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 81/157 (51%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  ++    LL+QM V G S     + +VI+   + G  ++AL++   +   G
Sbjct: 515 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 574

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IY+ I  AL  E R + +  ++ N++   +  +   YN ++ +LCK    + A 
Sbjct: 575 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 634

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           + L  M + GC P+  +YT ++  +   G V+EA+E+
Sbjct: 635 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEM 671



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + D    LL  M  +G+S +  ++ S+ ++  R G   + ++MF  I++  
Sbjct: 550 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 609

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L             + M   G  PN  TY IL++ L     V  A 
Sbjct: 610 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 669

Query: 121 KLLVEMGNKG 130
           ++L E+ +KG
Sbjct: 670 EMLTELCSKG 679


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 290/555 (52%), Gaps = 15/555 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++++ I +Y R G    A+  F R+  F   P    YN I+DAL+        + +Y  M
Sbjct: 53  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+ P++ T+ I L++ C   R   A +LL  + ++G    AV+Y T+V  +   G  
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 168

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +AR+     L       ++ +N +++ LCK   + EA  LL +++ RG+  N+ TY+  
Sbjct: 169 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 228

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC+ G +  ++ ++  M      P++ ++ +L++G        EA     RM+ +G 
Sbjct: 229 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+   Y+T+I G C    + EA  +          P+  TY +LI+G    G++  A +
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++N   + G  P++V Y  +VK LC   +   A  ++ +MA E C P+  T+N  I GLC
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 407

Query: 387 GCGRVDWAMKLLDQ--MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
             G +  A  +++   MK Y  LP++ T+N L+DG  +  ++  A +LV  + + GI  +
Sbjct: 408 KMGNISDATVVMNDAIMKGY--LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            +TYN++L+G+C+AG V E  +   +M+++G   + IT+NI+I  +C+  K+  A +++ 
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++   G  +PD +S+ +L++G C +G ++ A++  QK+  +G      T+N L+ +    
Sbjct: 526 KMSQEG-LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584

Query: 565 LGHLGPVYILDDIMA 579
           L       I D++++
Sbjct: 585 LNMHMAEKIFDEMLS 599



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 216/419 (51%), Gaps = 9/419 (2%)

Query: 94  DGME----PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           DGM     P+V TYN L++ LCK +    A   L  M N+GC PD  +Y TI+   CK+ 
Sbjct: 246 DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS 305

Query: 150 QVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            V+EA EL        F      Y +LINGLC E  +E A  L  E   +GI P+++ Y+
Sbjct: 306 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 365

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++  LC  G +  +L ++ +M   GC+P+I ++  ++ G    G   +A+ + N  I +
Sbjct: 366 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 425

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G+LP+V  ++TLI G C    +D A+ +  +M E    P+  TY+++++G  KAG +   
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 485

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           ++ +  MI  GC PN + Y  +++  C++N   +A  +I KM+ E   P+ V+FNT I G
Sbjct: 486 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 545

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G ++ A  L  ++++        T+N L+        +  A ++  E+   G + +
Sbjct: 546 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
             TY  ++ G C+   V  A+  L +M+ +G      TF  +I +     +V  A+ ++
Sbjct: 606 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 664



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 213/435 (48%), Gaps = 6/435 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
            G   +A+++   +R + + P V  YN ++  L  ++           M   G  P+ FT
Sbjct: 235 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 293

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           YN ++   CK + V  A +LL +   KG  PD V+Y ++++ +C  G VE A EL     
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           A      + VYN+L+ GLC +  I  A  ++ EM + G  P++ TY+ +I+ LC +GN+ 
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 413

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +  ++    ++G  P++ +F +L+ GY    +   A  L  RM   G  P+ + Y++++
Sbjct: 414 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 473

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +GLC  G ++E      +M    C PN  TY+ LI+ F ++  +  AS++  +M   G  
Sbjct: 474 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 533

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ V++  ++   C+N     A+ L +K+  +       TFNT I    G   +  A K+
Sbjct: 534 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 593

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            D+M       +  TY  L+DG  +   V  A+  + E+ K G   ++ T+  +++ +  
Sbjct: 594 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 653

Query: 458 AGMVVEAFQLLGKML 472
              V +A  ++  M+
Sbjct: 654 NHRVFQAVGIIHIMV 668



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 232/462 (50%), Gaps = 14/462 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K       + L++M  +G    +  + ++I+ Y ++ + ++A ++       G
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  +++ L AE        +++  +  G++P++  YN L+K LC    +  A 
Sbjct: 322 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 381

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           +++ EM  +GC PD  +Y  +++ +CK+G + +A     +  M+ +   V  +N LI+G 
Sbjct: 382 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 441

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++ A  L+  M + GI P+ ITY+++++ LC  G V        +M ++GC+PN 
Sbjct: 442 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 501

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L++ +    +  EAS +  +M +EG  P+ V+++TLI+G C NG ++ A  +  +
Sbjct: 502 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 561

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +EE        T++ LI  F+   N+  A +I++ M+S G   +   Y  ++   C+   
Sbjct: 562 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 621

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A+  + +M  +   P+  TF   I  L    RV  A+ ++  M +   +P      E
Sbjct: 622 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP------E 675

Query: 416 LLDGLLRVNRVKEAFE--LVTEIEKCGIQLNIVTYNTILHGV 455
           ++D +L  ++ + A    LV ++ K G  ++  TY  +  GV
Sbjct: 676 VVDTILNADKKEIAAPKILVEDLMKKG-HISYPTYEVLHEGV 716


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/474 (31%), Positives = 262/474 (55%), Gaps = 8/474 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNR--VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           M    + P+V+T  IL+   C +N      A+ +L  M   G  P+ V+++T+++ +   
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 149 GQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
            ++ +A +L      M +   V  Y+ +INGLCK      A  LL +M ++G  PNV+ Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           STII SLC    +  ++  L +M  RG +PN+ +++S+L G+   GR++EA+ L+ +M+ 
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
              +P+ V ++ L+ GL   G + EA  V   M E    PNV TY+AL+DG+     +  
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++N M+  GC+P+V +Y  ++K  C++    +A  L+ +M+ +   P+TVT++T +K
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMK 300

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  GR   A KLL++M+ Y  LP++ TY+ +LDGL +   + EAFEL+  +++  I+ 
Sbjct: 301 GFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEP 360

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           NI  Y  ++ G+C  G +  A +L   + ++G + D +T+ ++I    K G  N A +L 
Sbjct: 361 NIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELF 420

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
             +   G   P+  +Y  ++ G   +G    A   +++M+  G   + +T+ +L
Sbjct: 421 RDMAVHGCL-PNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 142/438 (32%), Positives = 232/438 (52%), Gaps = 5/438 (1%)

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
            + F     +  NM + G++PN  T++ LL  L    ++  A KL  EM   G  PD ++
Sbjct: 25  HDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVIT 84

Query: 138 YTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y+TI++ +CK+G    A +L  +         V VY+ +I+ LCK+  I EA   L EMV
Sbjct: 85  YSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMV 144

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           +RGI PNV+TYS+I+   C++G    +  +  QM  R   P+  +F  L+ G    G   
Sbjct: 145 NRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMIL 204

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA  ++  MI +G  PNV  Y+ L+ G CS   MDEA  +   M    C P+V +Y+ LI
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G  K+G +  A  +   M     +P+ V Y+ ++K  CQ+     A  L+E+M      
Sbjct: 265 KGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLL 324

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +T++  + GLC  G +D A +LL  M++ +  PNI  Y  L+ G+    +++ A EL
Sbjct: 325 PDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
            + +   GIQ ++VTY  ++ G+ + G+  EA +L   M + G   ++ T+N+II  + +
Sbjct: 385 FSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLR 444

Query: 493 QGKVNNAIQLLDRIRGGG 510
            G  +NA +L++ + G G
Sbjct: 445 NGDTSNAGRLIEEMVGRG 462



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 209/384 (54%), Gaps = 15/384 (3%)

Query: 196 IDPNVITYSTIISSLC--DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           I P+V T + +I+  C  +  +   +  +LG MF  G  PN  +F++LL G     +  +
Sbjct: 6   IRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L++ M++ G+ P+V+ YST+I+GLC  GS   A+ +  +MEE  C PNV  YS +ID
Sbjct: 66  AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
              K   +  A +  + M++ G SPNVV Y+ ++   C     ++A SL ++M   N  P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +TVTFN  + GL   G +  A  + + M +    PN+ TYN L+DG    +++ EA +L 
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             + + G   ++ +YN ++ G C++G + EA  LL +M  +    D +T++ ++  +C+ 
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G+  +A +LL+ +R  G   PD+++Y+ +L G+C  G + EAF  L+ M    I PN   
Sbjct: 306 GRPQDAQKLLEEMRSYGLL-PDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFI 364

Query: 554 WNVLV------------RSLFSNL 565
           + +L+            R LFSNL
Sbjct: 365 YTILIQGMCNFGKLEAARELFSNL 388



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 212/432 (49%), Gaps = 5/432 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G+  +   F +++N          A+K+F  + + G +P V  Y+ I++ L      +M 
Sbjct: 42  GLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMA 101

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   M+  G +PNV  Y+ ++ +LCK+  +  A + L EM N+G +P+ V+Y++I+  
Sbjct: 102 IQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHG 161

Query: 145 ICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            C LG+  EA  L  +            +N L++GL KE  I EA  +   M+++G++PN
Sbjct: 162 FCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPN 221

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V TY+ ++   C    ++ +  +   M  +GC P++ S+  L+KG+   GR  EA  L  
Sbjct: 222 VNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLA 281

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  +   P+ V YSTL+ G C +G   +A  +  +M      P++ TYS ++DG  K G
Sbjct: 282 EMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQG 341

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L  A ++   M  +   PN+  YT +++ +C       A  L   +  +   P+ VT+ 
Sbjct: 342 HLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYT 401

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I GL   G  + A +L   M  + CLPN  TYN ++ G LR      A  L+ E+   
Sbjct: 402 VMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR 461

Query: 440 GIQLNIVTYNTI 451
           G   +  T+  +
Sbjct: 462 GFSADSSTFQML 473



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 214/423 (50%), Gaps = 5/423 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L  K +I     L  +M   G       + ++IN   ++G    A+++  ++ E G
Sbjct: 53  LLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG 112

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V +Y+ I+D+L  +   +      S M   G+ PNV TY+ +L   C   R + A 
Sbjct: 113 CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEAT 172

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGL 175
            L  +M  +   PD V++  +V  + K G + EA+   E  +  G    V+ YNAL++G 
Sbjct: 173 SLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGY 232

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C + +++EA  L   MV +G  P+V +Y+ +I   C  G ++ + G+L +M  +   P+ 
Sbjct: 233 CSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++L+KG+   GR  +A  L   M   G LP+++ YS ++ GLC  G +DEA  +   
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E+   PN+  Y+ LI G    G L  A ++++ +   G  P+VV YT M+  L +  +
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            ++A  L   MA   C PN+ T+N  I+G    G    A +L+++M       + +T+  
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQM 472

Query: 416 LLD 418
           L D
Sbjct: 473 LSD 475



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 3/198 (1%)

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGR--VDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           M   N  P+  T    I   C        +A  +L  M +    PN  T++ LL+GL   
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            ++ +A +L  E+ K G + +++TY+TI++G+C+ G    A QLL KM  +G K + + +
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           + II + CK   +  A++ L  +   G  +P++++Y+S+L G CN G   EA    ++M+
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRG-ISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179

Query: 544 NEGICPNFATWNVLVRSL 561
              + P+  T+N+LV  L
Sbjct: 180 ERNVMPDTVTFNILVDGL 197


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 281/563 (49%), Gaps = 17/563 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +ID    LL +M   G+  +  +  S+IN Y + G   +A  +  R+ ++ LKP    YN
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD    E   S    +   M ++G+EP V TYN LLK LC+    D A ++   M   
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKX 466

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G APD V Y+T++  + K+   E A       LA  F      +N +I+GLCK  K+ EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M D G  P+ ITY T+I   C   NV  +  + G M     +P+I  + SL+ G
Sbjct: 527 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISG 586

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  E +DL   M   G  PN+V Y  LI G C  G +D+A S  ++M EN    N
Sbjct: 587 LFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 646

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +   S ++ G  + G +  A+ +  +M+ +G  P+   + C +K    +++ + A   I 
Sbjct: 647 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLK----SDIRYAAIQKIA 699

Query: 365 KMAFENCP----PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
               E+C     PN + +N  I GLC  G+VD A +    +     +P+  TY  L+ G 
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                V EAF L  E+ + G+  NIVTYN +++G+C++  V  A +L  K+  +G   + 
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N +I  YCK G ++ A +L D++   G  +P +++Y++L+ G+C  G ++ +   L 
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEEG-ISPSVVTYSALINGLCKHGDIERSMKLLN 878

Query: 541 KMLNEGICPNFATWNVLVRSLFS 563
           +M+  G+      +  LV+  F 
Sbjct: 879 QMIKAGVDSKLIEYCTLVQGGFK 901



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 158/529 (29%), Positives = 278/529 (52%), Gaps = 9/529 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  VF  ++  Y   GL + AL +F  + + G  P+++  N +L+ L+        + +Y
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             M R G+ P+VF  +I++ A CK+ +VD A   + +M N G  P+ V+Y ++++    L
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 149 GQVEEARELAMRFGS--GVS----VYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVI 201
           G VE A+ + ++F S  GVS     Y  LI G CK+ K++EA  +L  M +   + P+  
Sbjct: 275 GDVEAAKGV-LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            Y  +I   C  G ++ ++ +L +M   G   N+    SL+ GY   G  HEA  +  RM
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +     P+  +Y+TL+ G C  G   EA ++  +M +    P V TY+ L+ G  + G  
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 453

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A QIW+ M+  G +P+ V Y+ ++  L +   F  A +L + +       + +TFNT 
Sbjct: 454 DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 513

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC  G++  A ++ D+MK   C P+  TY  L+DG  + + V +AF++   +E+  I
Sbjct: 514 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXI 573

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             +I  YN+++ G+ ++  +VE   LL +M I G   + +T+  +I  +CK+G ++ A  
Sbjct: 574 SPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 633

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
               +   G  + +II  ++++ G+   G + EA + +QKM++ G  P+
Sbjct: 634 SYFEMTENG-LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 158/599 (26%), Positives = 284/599 (47%), Gaps = 39/599 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  E     Y+ QQM   G+     +   ++N++ + G  ++A     ++   G
Sbjct: 197 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 256

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  Y+ +++  ++         +   M   G+  NV TY +L+K  CK  ++D A 
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 316

Query: 121 KLLVEMGNKGC-APDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSVY--NALING 174
           K+L  M  +    PD  +Y  ++   C+ G++++A  L    +R G   +++  N+LING
Sbjct: 317 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 376

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK  +I EA  ++  MVD  + P+  +Y+T++   C  G+   +  +  +M   G  P 
Sbjct: 377 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 436

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +LLKG    G   +A  +W+ M++ G  P+ V YSTL+ GL    + + A ++  
Sbjct: 437 VLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWK 496

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +       +  T++ +I G  K G ++ A +I+++M   GCSP+ + Y  ++   C+ +
Sbjct: 497 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 556

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              QA  +   M  E   P+   +N+ I GL    R+     LL +M      PNI TY 
Sbjct: 557 NVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYG 616

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   + +AF    E+ + G+  NI+  +T++ G+ R G + EA  L+ KM+  
Sbjct: 617 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 676

Query: 475 G----------------------TKLDA----------ITFNIIIYAYCKQGKVNNAIQL 502
           G                        LD           I +NI I   CK GKV++A + 
Sbjct: 677 GFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 736

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              +   G + PD  +Y +L+ G   +G + EAF    +ML  G+ PN  T+N L+  L
Sbjct: 737 FSMLSLKG-FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 203/430 (47%), Gaps = 13/430 (3%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           P+  SY  +V  + +    +E R          +  N L++ LCK        W     V
Sbjct: 100 PNVKSYCKLVHILSRGRMYDETR----------AYLNQLVD-LCKFKDRGNVIWDELVGV 148

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            R    +   +  I+    + G  + +L +   M   G  P++ S  SLL   +  G TH
Sbjct: 149 YREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 208

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A  ++ +MIR G +P+V   S +++  C +G +DEA     +ME     PN+ TY +LI
Sbjct: 209 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 268

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC- 371
           +G+   G++  A  +   M   G S NVV YT ++K  C+     +A  ++  M  E   
Sbjct: 269 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 328

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   +   I G C  G++D A++LLD+M +     N+   N L++G  +   + EA  
Sbjct: 329 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 388

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++T +    ++ +  +YNT+L G CR G   EAF L  KML EG +   +T+N ++   C
Sbjct: 389 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           + G  ++A+Q+   +   G   PD + Y++LL G+      + A    + +L  G   + 
Sbjct: 449 RVGAFDDALQIWHLMMKXG-VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 507

Query: 552 ATWNVLVRSL 561
            T+N ++  L
Sbjct: 508 ITFNTMISGL 517



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 223/484 (46%), Gaps = 72/484 (14%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  EG+  +   + +++    RVG  + AL++++ + + G+ P    Y+ +LD L 
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLF 483

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F   + ++ ++   G   +  T+N ++  LCK  ++  A ++  +M + GC+PD +
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 137 SYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CK   V +A ++  AM        + +YN+LI+GL K  ++ E   LL EM
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEM 603

Query: 192 VDRGIDPNVITY-----------------------------------STIISSLCDVGNV 216
             RG+ PN++TY                                   ST++S L  +G +
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 663

Query: 217 ETSLGILGQMFVRGCNPNIHSF----------------------TSLLK----------G 244
           + +  ++ +M   G  P+   F                      T LL           G
Sbjct: 664 DEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAG 723

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A   ++ +  +GF+P+   Y TLIHG  + G++DEA  +  +M      PN
Sbjct: 724 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 783

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+ALI+G  K+ N+  A ++++++   G  PNVV Y  ++   C+      A  L +
Sbjct: 784 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 843

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM  E   P+ VT++  I GLC  G ++ +MKLL+QM +      +  Y  L+ G  + +
Sbjct: 844 KMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTS 903

Query: 425 RVKE 428
              E
Sbjct: 904 NYNE 907



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 60/356 (16%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM---------------------EENSC 301
           ++ F PNV +Y  L+H L      DE  +   Q+                      E + 
Sbjct: 95  QQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAF 154

Query: 302 PPNV------------TTYSAL---------------------IDGFAKAGNLLGASQIW 328
            P V             T +AL                     ++   K G    A  ++
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            +MI  G  P+V   + MV   C++    +A   ++KM      PN VT+++ I G    
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVT 447
           G V+ A  +L  M +     N+ TY  L+ G  +  ++ EA +++  + E+  +  +   
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  ++ G CR G + +A +LL +ML  G K +    N +I  YCK+G+++ A  ++ R+ 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 508 GGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              +WN  PD  SY +LL G C  G   EAF    KML EGI P   T+N L++ L
Sbjct: 395 ---DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 447


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 155/490 (31%), Positives = 259/490 (52%), Gaps = 7/490 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           PN FTY IL++       +D A +LL EM + G   +AV +TT++  +C  G+V EA   
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 155 -RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            R +A      V  Y AL++ LCK  K +EA  +L EM+ RG  P+ +T+ST+I  LC  
Sbjct: 67  FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE-ASDLWNRMIREGFLPNVVA 272
           G+ E +  +L  +  RG   +  +F ++++       + E AS +   +I +GF P V+ 
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           ++ +I+G C    +D A  +   M E  C PNV T++ LI G  KA  +  A Q+  +M+
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           + GCSPNVV Y+ ++  LC+      A+ L + M   NCPPN VT N  I GLC   R++
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ-LNIVTYNTI 451
            A +L  +M++  C P+I TYN L+DGL +  +V EAF+L   I + G+   N VTY+T+
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 366

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
            HG    G + +A ++   ++ +G   D  T+  +I  YCK  +    ++L++ +   G 
Sbjct: 367 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG- 425

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           + P + + +++L G+      + A      M   G   +   +N++V  +     H   +
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKAL 485

Query: 572 YILDDIMANK 581
            +L+ ++  +
Sbjct: 486 AVLEQVIDKR 495



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/567 (26%), Positives = 283/567 (49%), Gaps = 11/567 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  + D  Q +L++M   G +     F ++I+   + G  EQA ++   + + G
Sbjct: 84  LVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 143

Query: 61  LKPTVKIYNHILDALLAE-NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           +  +   +  I+  L  + N   + + +   +   G  P V  +N+++   CK   +D A
Sbjct: 144 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 203

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALING 174
           YKLL  M  KGC P+  ++T +++ +CK  +V EA++L  +  +G     V  Y+ +ING
Sbjct: 204 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVING 263

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+ ++++A+ L   M  R   PNV+T++ +I  LC    +E +  +  +M   GC P+
Sbjct: 264 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 323

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           I ++ SL+ G     +  EA  L+  +   G    N V YSTL HG  + G M +A  + 
Sbjct: 324 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 383

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             + +    P++ TY++LI  + K    +   ++   M S G  P V   + ++  L + 
Sbjct: 384 SMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEG 443

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM---KQYECLPNI 410
           N   +A  L + MA   C  + + +N  ++G+    + + A+ +L+Q+   +  +  P+ 
Sbjct: 444 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSS 503

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           +  + L++ L +V R  +A +L+ ++ + G    + +YN +L G+ R     EA Q+   
Sbjct: 504 SAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEA 563

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M+  G   +  T N++I   C   KV++A +L+ R+   G   PDI +  +L+ G C SG
Sbjct: 564 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG-CCPDIETCNTLIGGYCKSG 622

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVL 557
               A   L++M   G+ PN  T ++L
Sbjct: 623 RADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 190/391 (48%), Gaps = 40/391 (10%)

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            R C PN  ++  L++G+   G    A  L   M   GF  N V ++TL+ GLC  G + 
Sbjct: 2   ARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVV 61

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA+     M ++ C P+V TY+AL+    KAG    A  +   MI+ GC+P+ V ++ ++
Sbjct: 62  EALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120

Query: 348 KVLCQNNMFHQAHSLIEKM----------AFENC-------------------------- 371
             LC+     QA  ++E +          AFE                            
Sbjct: 121 DGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P  + FN  I G C    +D A KLL+ M +  C+PN+ T+  L+ GL + NRV EA +
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ ++   G   N+VTY+T+++G+C+ G V +A++L   M       + +T NI+I   C
Sbjct: 241 LLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 300

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI-CPN 550
           K  ++  A QL  R+R  G   PDII+Y SL+ G+C S  + EAF   Q +   G+   N
Sbjct: 301 KAKRIEEARQLYHRMRETG-CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             T++ L    ++ LG +     +  ++ +K
Sbjct: 360 AVTYSTLFHG-YAALGRMADACRIFSMLVDK 389


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 162/519 (31%), Positives = 267/519 (51%), Gaps = 7/519 (1%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N  LD L   NR      ++ N       PN FTY IL++       +D A +LL EM +
Sbjct: 26  NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
            G   +AV +TT++  +C  G+V EA    R +A      V  Y AL++ LCK  K +EA
Sbjct: 86  SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEA 145

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L EMV +G  P+ +T+ST+I  LC  G+ E +  +L  +  RG   +  +F ++++ 
Sbjct: 146 QGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQR 205

Query: 245 YLLGGRTHE-ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                 + E AS +   +I +GF P V+ ++ +I+G C    +D A  +   M E  C P
Sbjct: 206 LCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVP 265

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           NV T++ LI G  KA  +  A Q+  +M+  GCSPNVV Y+ ++  LC+      A+ L 
Sbjct: 266 NVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELF 325

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           + M   NCPPN VT N  I GLC   R++ A +L  +M++  C P+I TYN L+DGL + 
Sbjct: 326 QLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKS 385

Query: 424 NRVKEAFELVTEIEKCGIQ-LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            +V EAF+L   I + G+   N VTY+T+ HG    G + +A ++   ++ +G   D  T
Sbjct: 386 FQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLAT 445

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  +I  YCK  +    ++L++ +   G + P + + +++L G+      + A      M
Sbjct: 446 YTSLILEYCKTSRAVEVVELVEEMASKG-FPPRVNTLSAVLGGLFEGNHTERAIQLFDSM 504

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
              G   +   +N++V  +     H   + +L+ ++  +
Sbjct: 505 AARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKR 543



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/567 (26%), Positives = 283/567 (49%), Gaps = 11/567 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  + D  Q +L++M  +G +     F ++I+   + G  EQA ++   + + G
Sbjct: 132 LVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG 191

Query: 61  LKPTVKIYNHILDALLAE-NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           +  +   +  I+  L  + N   + + +   +   G  P V  +N+++   CK   +D A
Sbjct: 192 MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSA 251

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALING 174
           YKLL  M  KGC P+  ++T +++ +CK  +V EA++L  +   G     V  Y+ +ING
Sbjct: 252 YKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVING 311

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+ ++++A+ L   M  R   PNV+T++ +I  LC    +E +  +  +M   GC P+
Sbjct: 312 LCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPD 371

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           I ++ SL+ G     +  EA  L+  +   G    N V YSTL HG  + G M +A  + 
Sbjct: 372 IITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 431

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             + +    P++ TY++LI  + K    +   ++   M S G  P V   + ++  L + 
Sbjct: 432 SMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEG 491

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM---KQYECLPNI 410
           N   +A  L + MA   C  + + +N  ++G+    + D A+ +L+Q+   +  +  P+ 
Sbjct: 492 NHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSS 551

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           +  + L++ L +V +  +A +L+ ++ + G    + +YN +L G+ R     EA Q+   
Sbjct: 552 SAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEA 611

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M+  G   +  T N++I   C   KV++A +L+ R+   G   PDI +  +L+ G C SG
Sbjct: 612 MVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLG-CCPDIETCNTLIGGYCKSG 670

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVL 557
               A   L++M   G+ PN  T ++L
Sbjct: 671 RADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 262/564 (46%), Gaps = 45/564 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R+   ++AL +F         P    Y  ++    +     +   +   MK  G E N  
Sbjct: 34  RLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAV 93

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
            +  L+K LC   RV  A +    M  K CAPD ++YT +V ++CK G+ +EA    RE+
Sbjct: 94  VHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREM 152

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI-------------------- 196
            A         ++ LI+GLCK    E+AF +L +++ RG+                    
Sbjct: 153 VAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNS 212

Query: 197 ----------------DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                            P V+ ++ +I+  C   +++++  +L  M  +GC PN+ +FT 
Sbjct: 213 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G     R  EA  L  +M+  G  PNVV YST+I+GLC  G +D+A  +   ME  +
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           CPPNV T++ LIDG  KA  +  A Q+++RM   GC+P+++ Y  ++  LC++    +A 
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392

Query: 361 SLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            L + +        N VT++T   G    GR+  A ++   +      P++ TY  L+  
Sbjct: 393 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 452

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             + +R  E  ELV E+   G    + T + +L G+        A QL   M   G   D
Sbjct: 453 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 512

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           A+ +N+++    +  K + A+ +L+++  +   ++NP   +  +L+  +C  G   +A  
Sbjct: 513 ALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQ 572

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
            L KM   G     +++N L+  L
Sbjct: 573 LLHKMSERGFAAAVSSYNRLLSGL 596



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 216/424 (50%), Gaps = 5/424 (1%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R G  V   N  ++ LC+ ++ +EA  L    + R   PN  TY  +I      G+++ +
Sbjct: 17  RVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIA 76

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +L +M   G   N    T+L+KG    GR  EA + +  M ++   P+V+ Y+ L+H 
Sbjct: 77  IQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHA 135

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G  DEA  +  +M    C P+  T+S LIDG  K G+   A ++   +I  G   +
Sbjct: 136 LCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS 195

Query: 340 VVAYTCMVKVLCQN-NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
             A+  +++ LC   N    A  ++  +  +   P  + FN  I G C    +D A KLL
Sbjct: 196 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 255

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           + M +  C+PN+ T+  L+ GL + NRV EA +L+ ++   G   N+VTY+T+++G+C+ 
Sbjct: 256 EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQ 315

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G V +A++L   M       + +T NI+I   CK  ++  A QL  R+R  G   PDII+
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG-CAPDIIT 374

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGI-CPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           Y SL+ G+C S  + EAF   Q +   G+   N  T++ L    ++ LG +     +  +
Sbjct: 375 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG-YAALGRMADACRIFSM 433

Query: 578 MANK 581
           + +K
Sbjct: 434 LVDK 437


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 267/520 (51%), Gaps = 6/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P++  +  +L ++     +S +  + + M   G+ PNV+T NIL
Sbjct: 38  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 97

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C  NRV  A+ +L ++   G  PD  ++TT++  +C  G++ EA  L  +     F
Sbjct: 98  INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 157

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      P+V+ Y++II SLC    V  +  
Sbjct: 158 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 217

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  QM  +G +P+I ++TSL+            + L N+M+    LP+VV +ST++  LC
Sbjct: 218 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 277

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  +   M +    P+V TY+ L+DG      +  A ++++ M+  G +P+V+
Sbjct: 278 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 337

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +YT ++   C+ +   +A  L E+M  +   P+T T+NT + GLC  GR+  A+ L  +M
Sbjct: 338 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEM 397

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P++ TY+ LLD L +   ++EA  L+  IE   +  +I  YN I+ G+CRAG +
Sbjct: 398 VARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 457

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  L   +  +G      T+NI+I+  CK+G +N A +L   +  G + +PD  +Y +
Sbjct: 458 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM-DGNDCSPDGCTYNT 516

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  G   +     A   L++ML  G   + +T  +LV  L
Sbjct: 517 IARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 245/486 (50%), Gaps = 5/486 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L  QM   GV  +      +INS+  +     A  +  +I + G +P    +  ++ 
Sbjct: 75  VLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIR 134

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  E +      ++  M  +G +PNV TY  L+  LCK      A +LL  M    C P
Sbjct: 135 GLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 194

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           D V YT+I+ S+CK  QV EA  L +   G G+S     Y +L++ LC   + +    LL
Sbjct: 195 DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLL 254

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +MV+  I P+V+ +ST++ +LC  G V  +  I+  M  RG  P++ ++T+L+ G+ L 
Sbjct: 255 NQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQ 314

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               EA  +++ M+R+GF P+V++Y+TLI+G C    +D+A+ +  +M      P+  TY
Sbjct: 315 SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTY 374

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + L+ G    G L  A  +++ M++ G  P++V Y+ ++  LC+N    +A +L++ +  
Sbjct: 375 NTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEA 434

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            N  P+   +N  I G+C  G ++ A  L   +      P++ TYN ++ GL +   + E
Sbjct: 435 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 494

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A +L  E++      +  TYNTI  G  +    + A QLL +ML  G   D  T  +++ 
Sbjct: 495 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVE 554

Query: 489 AYCKQG 494
                G
Sbjct: 555 MLSDDG 560


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 290/555 (52%), Gaps = 15/555 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++++ I +Y R G    A+  F R+  F   P    YN I+DAL+        + +Y  M
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+ P++ T+ I L++ C   R   A +LL  + ++G    AV+Y T+V  +   G  
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHT 167

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +AR+     L       ++ +N +++ LCK   + EA  LL +++ RG+  N+ TY+  
Sbjct: 168 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIW 227

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC+ G +  ++ ++  M      P++ ++ +L++G        EA     RM+ +G 
Sbjct: 228 IRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+   Y+T+I G C    + EA  +          P+  TY +LI+G    G++  A +
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++N   + G  P++V Y  +VK LC   +   A  ++ +MA E C P+  T+N  I GLC
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 406

Query: 387 GCGRVDWAMKLLDQ--MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
             G +  A  +++   MK Y  LP++ T+N L+DG  +  ++  A +LV  + + GI  +
Sbjct: 407 KMGNISDATVVMNDAIMKGY--LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            +TYN++L+G+C+AG V E  +   +M+++G   + IT+NI+I  +C+  K+  A +++ 
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++   G  +PD +S+ +L++G C +G ++ A++  QK+  +G      T+N L+ +    
Sbjct: 525 KMSQEG-LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583

Query: 565 LGHLGPVYILDDIMA 579
           L       I D++++
Sbjct: 584 LNMHMAEKIFDEMLS 598



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 216/419 (51%), Gaps = 9/419 (2%)

Query: 94  DGME----PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           DGM     P+V TYN L++ LCK +    A   L  M N+GC PD  +Y TI+   CK+ 
Sbjct: 245 DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKIS 304

Query: 150 QVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            V+EA EL        F      Y +LINGLC E  +E A  L  E   +GI P+++ Y+
Sbjct: 305 MVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYN 364

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++  LC  G +  +L ++ +M   GC+P+I ++  ++ G    G   +A+ + N  I +
Sbjct: 365 SLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMK 424

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G+LP+V  ++TLI G C    +D A+ +  +M E    P+  TY+++++G  KAG +   
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 484

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           ++ +  MI  GC PN + Y  +++  C++N   +A  +I KM+ E   P+ V+FNT I G
Sbjct: 485 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 544

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G ++ A  L  ++++        T+N L+        +  A ++  E+   G + +
Sbjct: 545 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
             TY  ++ G C+   V  A+  L +M+ +G      TF  +I +     +V  A+ ++
Sbjct: 605 SYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 663



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 213/435 (48%), Gaps = 6/435 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
            G   +A+++   +R + + P V  YN ++  L  ++           M   G  P+ FT
Sbjct: 234 AGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFT 292

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           YN ++   CK + V  A +LL +   KG  PD V+Y ++++ +C  G VE A EL     
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           A      + VYN+L+ GLC +  I  A  ++ EM + G  P++ TY+ +I+ LC +GN+ 
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +  ++    ++G  P++ +F +L+ GY    +   A  L  RM   G  P+ + Y++++
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +GLC  G ++E      +M    C PN  TY+ LI+ F ++  +  AS++  +M   G  
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLH 532

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ V++  ++   C+N     A+ L +K+  +       TFNT I    G   +  A K+
Sbjct: 533 PDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKI 592

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            D+M       +  TY  L+DG  +   V  A+  + E+ K G   ++ T+  +++ +  
Sbjct: 593 FDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTV 652

Query: 458 AGMVVEAFQLLGKML 472
              V +A  ++  M+
Sbjct: 653 NHRVFQAVGIIHIMV 667



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 232/462 (50%), Gaps = 14/462 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K       + L++M  +G    +  + ++I+ Y ++ + ++A ++       G
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  +++ L AE        +++  +  G++P++  YN L+K LC    +  A 
Sbjct: 321 FVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHAL 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           +++ EM  +GC PD  +Y  +++ +CK+G + +A     +  M+ +   V  +N LI+G 
Sbjct: 381 QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGY 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++ A  L+  M + GI P+ ITY+++++ LC  G V        +M ++GC+PN 
Sbjct: 441 CKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNP 500

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L++ +    +  EAS +  +M +EG  P+ V+++TLI+G C NG ++ A  +  +
Sbjct: 501 ITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQK 560

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +EE        T++ LI  F+   N+  A +I++ M+S G   +   Y  ++   C+   
Sbjct: 561 LEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTAN 620

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A+  + +M  +   P+  TF   I  L    RV  A+ ++  M +   +P      E
Sbjct: 621 VDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP------E 674

Query: 416 LLDGLLRVNRVKEAFE--LVTEIEKCGIQLNIVTYNTILHGV 455
           ++D +L  ++ + A    LV ++ K G  ++  TY  +  GV
Sbjct: 675 VVDTILNADKKEIAAPKILVEDLMKKG-HISYPTYEVLHEGV 715


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 271/507 (53%), Gaps = 7/507 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R      AL +  ++ + G +P +   + +L+      R S    +   M   G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +P+  T+N L+  L  +N+   A  L+ +M  +GC PD V+Y  +V+ +CK G ++ A 
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 156 ELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L  +   G     V +YN +I+GLCK   I++AF L  +M  +GI P+V TY+++IS L
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C+ G    +  +L  M  R  NPN+ +F++L+  ++  G+  EA  L++ MI+    P++
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             YS+LI+G C +  +DEA  +   M    C PNV TY+ LI GF KA  +    +++  
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G   N V Y  +++ L Q      A  + +KM  +  PP+ +T++  + GLC  G+
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+ + + +++ +  P+I TYN +++G+ +  +V++ ++L   +   G++ N++ Y T
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G CR G+  EA  L  +M  +GT  D+  +N +I A  + G    + +L+  +R  G
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFI 537
                  S  S++  + + G ++++++
Sbjct: 601 FVGD--ASTISMVINMLHDGRLEKSYL 625



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 273/519 (52%), Gaps = 6/519 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  + +    P++  +N +L A+    +F ++  +   M+   +  ++++YNIL
Sbjct: 62  DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRF 161
           +   C+ +++  A  +L +M   G  PD V+ +++++  C   ++ +A  L      M +
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 +N LI+GL   +K  EA  L+ +MV RG  P+++TY  +++ LC  G+++ +L 
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M       ++  + +++ G        +A  L+N+M  +G  P+V  Y++LI  LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           + G   +A  +   M E    PNV T+SALID F K G L+ A ++++ MI     P++ 
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++   C ++   +A  + E M  ++C PN VT+NT IKG C   RV+  M+L  +M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            Q   + N  TYN L+ GL +      A ++  ++   G+  +I+TY+ +L G+C+ G +
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  +   +     + D  T+NI+I   CK GKV +   L   +   G   P++I YT+
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTT 540

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++ G C  G  +EA    ++M  +G  P+   +N L+R+
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 239/486 (49%), Gaps = 41/486 (8%)

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSV 167
           N ++D A  L  EM      P  V +  ++S+I K+ + +    L      +R    +  
Sbjct: 58  NLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN LIN  C+  ++  A  +L +M+  G +P+++T S++++  C    +  ++ ++ QM 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +F +L+ G  L  +  EA  L ++M++ G  P++V Y  +++GLC  G +D
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+S+  +ME+     +V  Y+ +IDG  K  ++  A  ++N+M + G  P+V  Y  ++
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTF----------------------------- 378
             LC    +  A  L+  M      PN VTF                             
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 379 ------NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
                 ++ I G C   R+D A  + + M   +C PN+ TYN L+ G  +  RV+E  EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             E+ + G+  N VTYNT++ G+ +AG    A ++  KM+ +G   D IT++I++   CK
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            GK+  A+ + + ++   +  PDI +Y  ++ G+C +G +++ +     +  +G+ PN  
Sbjct: 478 YGKLEKALVVFEYLQ-KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536

Query: 553 TWNVLV 558
            +  ++
Sbjct: 537 IYTTMI 542



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 214/442 (48%), Gaps = 5/442 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  ++ + G +P +  Y  +++ L 
Sbjct: 172 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLC 231

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +   M++  +E +V  YN ++  LCK   +D A+ L  +M  KG  PD  
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVF 291

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++S +C  G+  +A  L       +    V  ++ALI+   KE K+ EA  L  EM
Sbjct: 292 TYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TYS++I+  C    ++ +  +   M  + C PN+ ++ +L+KG+    R 
Sbjct: 352 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 411

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E  +L+  M + G + N V Y+TLI GL   G  D A  +  +M  +  PP++ TYS L
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K G L  A  ++  +  +   P++  Y  M++ +C+         L   ++ +  
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN + + T I G C  G  + A  L  +MK+   LP+   YN L+   LR      + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAE 591

Query: 432 LVTEIEKCGIQLNIVTYNTILH 453
           L+ E+  CG   +  T + +++
Sbjct: 592 LIKEMRSCGFVGDASTISMVIN 613



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 216/414 (52%), Gaps = 6/414 (1%)

Query: 148 LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            G++ ++R L       +  +N L++ + K  K +    L   M +  I  ++ +Y+ +I
Sbjct: 68  FGEMVQSRPLP-----SIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILI 122

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C    +  +L +LG+M   G  P+I + +SLL GY    R  +A  L ++M+  G+ 
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 182

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+ V ++TLIHGL  +    EAV++  QM +  C P++ TY A+++G  K G++  A  +
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSL 242

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
             +M       +VV Y  ++  LC+      A +L  KM  +   P+  T+N+ I  LC 
Sbjct: 243 LKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCN 302

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GR   A +LL  M + +  PN+ T++ L+D  ++  ++ EA +L  E+ K  I  +I T
Sbjct: 303 YGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y+++++G C    + EA  +   M+ +    + +T+N +I  +CK  +V   ++L   + 
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G    + ++Y +L+ G+  +G    A    +KM+++G+ P+  T+++L+  L
Sbjct: 423 QRGLVG-NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 202/394 (51%), Gaps = 6/394 (1%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           NAL+N      K+++A  L  EMV     P+++ ++ ++S++  +   +  + +  +M  
Sbjct: 54  NALLN-----LKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQN 108

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
              + +++S+  L+  +    +   A  +  +M++ G+ P++V  S+L++G C +  + +
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISD 168

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           AV++  QM E    P+  T++ LI G         A  + ++M+  GC P++V Y  +V 
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN 228

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+      A SL++KM       + V +NT I GLC    +D A  L ++M+     P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ TYN L+  L    R  +A  L++ + +  I  N+VT++ ++    + G +VEA +L 
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            +M+      D  T++ +I  +C   +++ A  + + +    +  P++++Y +L+ G C 
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCK 407

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +  ++E     ++M   G+  N  T+N L++ LF
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 176/340 (51%), Gaps = 5/340 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ID    L  +M+ +G+      + S+I+     G    A ++   + E  
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++DA + E +      +Y  M +  ++P++FTY+ L+   C ++R+D A 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
            +   M +K C P+ V+Y T++   CK  +VEE     RE++ R   G +V YN LI GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +    + A  +  +MV  G+ P++ITYS ++  LC  G +E +L +   +      P+I
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  +++G    G+  +  DL+  +  +G  PNV+ Y+T+I G C  G  +EA ++  +
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           M+E+   P+   Y+ LI    + G+   ++++   M S G
Sbjct: 561 MKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCG 600



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 180/367 (49%), Gaps = 5/367 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L ++ +ID    LL++M+   +     ++ ++I+   +    + A  +F ++   G++P 
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPD 289

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN ++  L    R+S  + + SNM    + PNV T++ L+ A  K  ++  A KL  
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
           EM  +   PD  +Y+++++  C   +++EA+ +     S      V  YN LI G CK  
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++EE   L  EM  RG+  N +TY+T+I  L   G+ + +  I  +M   G  P+I +++
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            LL G    G+  +A  ++  + +    P++  Y+ +I G+C  G +++   +   +   
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PNV  Y+ +I GF + G    A  ++  M  +G  P+   Y  +++   ++     +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAAS 589

Query: 360 HSLIEKM 366
             LI++M
Sbjct: 590 AELIKEM 596



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 169/318 (53%), Gaps = 1/318 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L +  LL  +  +A  L+  M++   LP++V ++ L+  +      D  +S+  +M+   
Sbjct: 51  LSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLR 110

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ +Y+ LI+ F +   L  A  +  +M+  G  P++V  + ++   C +     A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 170

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L+++M      P+TVTFNT I GL    +   A+ L+DQM Q  C P++ TY  +++GL
Sbjct: 171 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGL 230

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +   +  A  L+ ++EK  I+ ++V YNTI+ G+C+   + +AF L  KM  +G + D 
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+N +I   C  G+ ++A +LL  +    + NP+++++++L+      G + EA     
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 541 KMLNEGICPNFATWNVLV 558
           +M+   I P+  T++ L+
Sbjct: 350 EMIKRSIDPDIFTYSSLI 367


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 159/572 (27%), Positives = 298/572 (52%), Gaps = 8/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +IEKLG   + + ++ +L  M+   G    EGV++  + +Y R G  ++A+ +F R+  +
Sbjct: 46  IIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +PTV  YN I+  L+    F   + +Y  M+  G+ P+V+++ I +K+ C+ +R   A
Sbjct: 106 DCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSV----YNALING 174
            +LL  M ++GC  + V+Y T+V    +    +E  EL  +   SGVS+    +N L++ 
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHV 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+  ++E   LL +++ RG+ PN+ TY+  I  LC  G ++ ++ ++G++  +G  P+
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++  L+ G     +  EA     +++ EG  P+   Y+TLI G C  G +  A  +  
Sbjct: 286 VVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILV 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
               N   P+  TY +LIDG    G    A  ++N  +  G  PNV+ Y  ++K L    
Sbjct: 346 NAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +A  L  +M+ +   P   TFN  + GLC  G V  A  L+  M      P+I T+N
Sbjct: 406 LILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G     +++ A E++  +   G+  ++ TYN++L+G+C+     +  +    M+ +
Sbjct: 466 ILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   +  TFNI++ + C+  K++ A+ LL+ ++     NPD +++ +L+ G C +G +  
Sbjct: 526 GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKS-VNPDAVTFGTLIDGFCKNGDLDG 584

Query: 535 AFIYLQKMLNEGICP-NFATWNVLVRSLFSNL 565
           A+   +KM    +   +  T+N+++ +    L
Sbjct: 585 AYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKL 616



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 269/561 (47%), Gaps = 15/561 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D    +  +M+  G++     F   + S+ R      AL++   +   G +  V  Y  
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCT 186

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++     EN       ++  M   G+   + T+N LL  LCK   V    KLL ++  +G
Sbjct: 187 VVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRG 246

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
             P+  +Y   +  +C+ G+++ A  +  R         V  YN LI GLCK  K +EA 
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAE 306

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L ++V+ G++P+  TY+T+I+  C  G V+ +  IL      G  P+  ++ SL+ G 
Sbjct: 307 VYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGL 366

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G T+ A  L+N  + +G  PNV+ Y+TLI GL + G + EA  ++ +M E    P V
Sbjct: 367 CHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEV 426

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ L++G  K G +  A  +   MIS G  P++  +  ++           A  +++ 
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+  T+N+ + GLC   + +  M+    M +  C PN+ T+N LL+ L R ++
Sbjct: 487 MMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHK 546

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLDAITFN 484
           + +A  L+ E++   +  + VT+ T++ G C+ G +  A+ L  KM  +        T+N
Sbjct: 547 LDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYN 606

Query: 485 IIIYAYCKQGKVNNAIQL----LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           III+A+ ++  V  A +L    +DR  G     PD  +Y  ++ G C +G +   + +L 
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLG-----PDGYTYRLMVDGFCKTGNVDLGYKFLL 661

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           +M+  G  P+  T   ++  L
Sbjct: 662 EMMENGFIPSLTTLGRVINCL 682



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/539 (24%), Positives = 258/539 (47%), Gaps = 7/539 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G   +   + +V+  +      ++  ++F ++   G+   +  +N +L  L 
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        +   + + G+ PN+FTYN  ++ LC+   +D A +++  + ++G  PD V
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVV 287

Query: 137 SYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++  +CK  + +EA   L      G+      YN LI G CK   ++ A  +L   
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNA 347

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G  P+  TY ++I  LC  G    +L +  +   +G  PN+  + +L+KG    G  
Sbjct: 348 VFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLI 407

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L + M  +G +P V  ++ L++GLC  G + +A  +   M      P++ T++ L
Sbjct: 408 LEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G++    +  A +I + M+ NG  P+V  Y  ++  LC+ + +       + M  + C
Sbjct: 468 IHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGC 527

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  TFN  ++ LC   ++D A+ LL++MK     P+  T+  L+DG  +   +  A+ 
Sbjct: 528 APNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587

Query: 432 LVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           L  ++E+   +  +  TYN I+H       V  A +L  +M+      D  T+ +++  +
Sbjct: 588 LFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           CK G V+   + L  +   G + P + +   ++  +C    + EA   + +M+ +G+ P
Sbjct: 648 CKTGNVDLGYKFLLEMMENG-FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 238/514 (46%), Gaps = 42/514 (8%)

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM--------------------GN 128
           S  K DG +  + TY  +++ L    + +   ++LV+M                    G 
Sbjct: 29  SMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGR 88

Query: 129 KG----------------CAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSVYN 169
           KG                C P   SY  I+S +   G  ++A ++ MR    G    VY+
Sbjct: 89  KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYS 148

Query: 170 ALI--NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
             I     C+  +   A  LL  M  +G + NV+ Y T++    +    +    + G+M 
Sbjct: 149 FTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKML 208

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G +  + +F  LL      G   E   L +++I+ G LPN+  Y+  I GLC  G +D
Sbjct: 209 ASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELD 268

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            AV +  ++ +    P+V TY+ LI G  K      A     ++++ G  P+   Y  ++
Sbjct: 269 AAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLI 328

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+  M   A  ++    F    P+  T+ + I GLC  G  + A+ L ++       
Sbjct: 329 AGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+  YN L+ GL     + EA +L +E+ + G+   + T+N +++G+C+ G V +A  L
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           +  M+ +G   D  TFNI+I+ Y  Q K+ NA+++LD +   G  +PD+ +Y SLL G+C
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG-VDPDVYTYNSLLNGLC 507

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +   ++     + M+ +G  PN  T+N+L+ SL
Sbjct: 508 KTSKYEDVMETYKTMVEKGCAPNLFTFNILLESL 541



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/506 (25%), Positives = 238/506 (47%), Gaps = 41/506 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   GVS     F  +++   + G  ++  K+  ++ + G+ P +  YN  +  L 
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        +   +   G +P+V TYN L+  LCKN++   A   L ++ N+G  PD+ 
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T+++  CK G V+ A  + +      F      Y +LI+GLC E +   A  L  E 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +GI PNVI Y+T+I  L + G +  +  +  +M  +G  P + +F  L+ G    G  
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L   MI +G+ P++  ++ LIHG  +   M+ A+ +   M +N   P+V TY++L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSL 502

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ++G  K        + +  M+  GC+PN+  +  +++ LC+ +   +A  L+E+M  ++ 
Sbjct: 503 LNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSV 562

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY--------------------------- 404
            P+ VTF T I G C  G +D A  L  +M++                            
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAE 622

Query: 405 --------ECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                    CL P+  TY  ++DG  +   V   ++ + E+ + G   ++ T   +++ +
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCL 682

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAI 481
           C    V EA  ++ +M+ +G   +A+
Sbjct: 683 CVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 222/482 (46%), Gaps = 41/482 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +K ++   + LL ++   GV  +   +   I    + G  + A++M  R+ + G
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN+++  L   ++F         +  +G+EP+ FTYN L+   CK   V  A 
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
           ++LV     G  PD  +Y +++  +C  G+   A  L     G G+     +YN LI GL
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             +  I EA  L  EM ++G+ P V T++ +++ LC +G V  + G++  M  +G  P+I
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  L+ GY    +   A ++ + M+  G  P+V  Y++L++GLC     ++ +     
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E  C PN+ T++ L++   +   L  A  +   M +   +P+ V +  ++   C+N  
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 356 FHQAHSLIEKM------------------AF-----------------ENC-PPNTVTFN 379
              A++L  KM                  AF                 + C  P+  T+ 
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + G C  G VD   K L +M +   +P++TT   +++ L   +RV EA  ++  + + 
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 440 GI 441
           G+
Sbjct: 702 GL 703



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 209/450 (46%), Gaps = 7/450 (1%)

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVS------VYNALINGLCKEHKIEEAFWLLCE 190
           +Y +I+  +   G+ E   E+ +     V       VY   +    ++ K++EA  +   
Sbjct: 42  TYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFER 101

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M     +P V +Y+ I+S L D G  + +  +  +M  RG  P+++SFT  +K +    R
Sbjct: 102 MDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSR 161

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            H A  L N M  +G   NVVAY T++ G       DE   +  +M  +     ++T++ 
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNK 221

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+    K G++    ++ +++I  G  PN+  Y   ++ LCQ      A  ++ ++  + 
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+N  I GLC   +   A   L ++      P+  TYN L+ G  +   V+ A 
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++      G   +  TY +++ G+C  G    A  L  + L +G K + I +N +I   
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             QG +  A QL   +   G   P++ ++  L+ G+C  G + +A   ++ M+++G  P+
Sbjct: 402 SNQGLILEAAQLASEMSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             T+N+L+    + L     + ILD +M N
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMMDN 490



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 138/274 (50%), Gaps = 9/274 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G   + DG   L++ M  +G       F  +I+ Y      E AL++   + + G+ P
Sbjct: 438 KMGCVSDADG---LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  YN +L+ L   +++  +   Y  M   G  PN+FT+NILL++LC+ +++D A  LL
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLL 554

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCK 177
            EM NK   PDAV++ T++   CK G ++ A  L  +             YN +I+   +
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTE 614

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           +  +  A  L  EMVDR + P+  TY  ++   C  GNV+     L +M   G  P++ +
Sbjct: 615 KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTT 674

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
              ++    +  R +EA+ + +RM+++G +P  V
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 36/173 (20%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++E L    ++D    LL++MK + V+     F ++I+ + + G  + A  +F ++ E +
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            +  +   YN I+ A   +   +M   ++  M    + P+ +TY +++   CK   VD  
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLG 656

Query: 120 YKLLVEMG-----------------------------------NKGCAPDAVS 137
           YK L+EM                                     KG  P+AV+
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 162/529 (30%), Positives = 277/529 (52%), Gaps = 30/529 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P+V  YN +L AL ++   +     + +M  DG+ PNV+TYNIL++ALC       A
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFG---SGVSVYNALING 174
             +L +M   GC P+ V+Y T+V++  + G+V+ A  L   MR G     +  +N+++NG
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +CK  K+E+A  +  EMV  G+ P+ ++Y+T++   C  G    +L +  +M  +G  P+
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +FTSL+      G    A  L  +M   G   N V ++ LI G C  G +D+A+    
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M++    P+V  Y+ALI+G+   G +  A ++ + M + G  P+VV Y+ ++   C+N 
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             H A  L ++M  +   P+ +T+++ I+ LCG  R+  A  L   M +    P+  TY 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   V+ A  L  ++ K G+  ++VTY+ +++G+ ++   +EA QLL K+  E
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569

Query: 475 -----GTKLDAI----------TFNIIIYAYCKQGKVNNAIQ----LLDRIRGGGEWNPD 515
                 TK DA+          +   ++  +C +G +N A +    +LDR      WN D
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR-----NWNLD 624

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              Y+ L+ G C +G + +A  + ++ML  G  PN  +   L+R LF N
Sbjct: 625 GSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFEN 673



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/518 (30%), Positives = 268/518 (51%), Gaps = 23/518 (4%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A + F  +   G+ P V  YN ++ AL           I  +M+  G  PNV TYN L+
Sbjct: 173 SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 232

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG-- 162
            A  +   VDGA +L+  M   G  P+ V++ ++V+ +CK G++E+AR++    +R G  
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLA 292

Query: 163 -SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             GVS YN L+ G CK     EA  +  EM  +GI P+V+T++++I  +C  GN+E ++ 
Sbjct: 293 PDGVS-YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVT 351

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++ QM  RG   N  +FT+L+ G+   G   +A      M +    P+VV Y+ LI+G C
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYC 411

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G MDEA  + ++ME     P+V TYS +I  + K  +   A ++  +M+  G  P+ +
Sbjct: 412 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 471

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ +++VLC       AH L + M      P+  T+ + I G C  G V+ A+ L D+M
Sbjct: 472 TYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKM 531

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEA----FELVTE-----------IEKCGIQLNIV 446
            +   LP++ TY+ L++GL +  R  EA    F+L  E           +  C  +  + 
Sbjct: 532 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELK 591

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +   +L G C  G++ EA ++   ML     LD   ++++I+ +C+ G V  A+    ++
Sbjct: 592 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 651

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
             GG + P+  S  SL+ G+  +G + EA   +Q++LN
Sbjct: 652 LQGG-FAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 688



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 250/509 (49%), Gaps = 24/509 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M+  G   +   + +++ ++ R G  + A ++   +RE GLKP +  +N +++ + 
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      ++  M R+G+ P+  +YN L+   CK      A  +  EM  KG  PD V
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 137 SYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           ++T+++  +CK G +E A       RE  ++       + ALI+G CK+  +++A   + 
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNE--VTFTALIDGFCKKGFLDDALLAVR 389

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M    I P+V+ Y+ +I+  C VG ++ +  +L +M  +G  P++ ++++++  Y    
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            TH A +L  +M+ +G LP+ + YS+LI  LC    + +A  +   M +    P+  TY+
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYT 509

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +LIDG  K GN+  A  + ++M+  G  P+VV Y+ ++  L ++    +A  L+ K+  E
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 569

Query: 370 NCPPNTVTFN---------------TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  P    ++                 +KG C  G ++ A K+   M       + + Y+
Sbjct: 570 DPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 629

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G  R   V +A     ++ + G   N  +  +++ G+   GMVVEA Q++ ++L  
Sbjct: 630 VLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNY 689

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +  DA     +I     +G V+  + +L
Sbjct: 690 CSLADAEASKALIDLNLNEGNVDAVLDVL 718



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 231/488 (47%), Gaps = 36/488 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+DG + L+  M+  G+  +   F S++N   + G  E A K+F  +   GL P    YN
Sbjct: 240 EVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYN 299

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++              +++ M + G+ P+V T+  L+  +CK   ++ A  L+ +M  +
Sbjct: 300 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRER 359

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGLCKEHKIEEA 184
           G   + V++T ++   CK G +++A    R +   R    V  YNALING C   +++EA
Sbjct: 360 GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEA 419

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM  +G+ P+V+TYSTIIS+ C   +  ++  +  QM  +G  P+  +++SL++ 
Sbjct: 420 RELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRV 479

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  +A  L+  MI+ G  P+   Y++LI G C  G+++ A+S+  +M +    P+
Sbjct: 480 LCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPD 539

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT---------------CMVKV 349
           V TYS LI+G +K+   + A Q+  ++      P    Y                 ++K 
Sbjct: 540 VVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKG 599

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C   + ++A  + + M   N   +   ++  I G C  G V  A+    QM Q    PN
Sbjct: 600 FCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPN 659

Query: 410 ITTYNELLDGLLRVNRVKEAFELV-----------TEIEKCGIQLNIVTYNT-----ILH 453
            T+   L+ GL     V EA +++            E  K  I LN+   N      +LH
Sbjct: 660 STSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLH 719

Query: 454 GVCRAGMV 461
           G+ + G++
Sbjct: 720 GMAKDGLL 727



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 170/378 (44%), Gaps = 55/378 (14%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++QM+  G+  +E  F ++I+ + + G  + AL     +++  +KP+V  YN +++   
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYC 411

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   M+  G++P+V TY+ ++ A CKN     A++L  +M  KG  PDA+
Sbjct: 412 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 471

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++  +C   ++ +A  L    ++ G       Y +LI+G CKE  +E A  L  +M
Sbjct: 472 TYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKM 531

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP---------------NIH 236
           V  G+ P+V+TYS +I+ L        +  +L +++     P                + 
Sbjct: 532 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELK 591

Query: 237 SFTSLLKGYLLGGRTHEASDL--------WN---------------------------RM 261
           S  +LLKG+ + G  +EA  +        WN                           +M
Sbjct: 592 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 651

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           ++ GF PN  +  +LI GL  NG + EA  V  Q+       +     ALID     GN+
Sbjct: 652 LQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNV 711

Query: 322 LGASQIWNRMISNGCSPN 339
                + + M  +G  P+
Sbjct: 712 DAVLDVLHGMAKDGLLPS 729



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 143/315 (45%), Gaps = 20/315 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D  + LL +M+ +G+      + ++I++Y +      A ++  ++ E G+ P    Y+
Sbjct: 415 RMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYS 474

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E R S  + ++ NM + G++P+ FTY  L+   CK   V+ A  L  +M   
Sbjct: 475 SLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF--------------------GSGVSVYN 169
           G  PD V+Y+ +++ + K  +  EA++L  +                      + +    
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVL 594

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           AL+ G C +  + EA  +   M+DR  + +   YS +I   C  GNV  +L    QM   
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQG 654

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN  S  SL++G    G   EA  +  +++    L +  A   LI    + G++D  
Sbjct: 655 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAV 714

Query: 290 VSVSYQMEENSCPPN 304
           + V + M ++   P+
Sbjct: 715 LDVLHGMAKDGLLPS 729


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 175/602 (29%), Positives = 287/602 (47%), Gaps = 45/602 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +LG+   +   Q +  Q+   GV  S   F ++IN   + G  ++A+ +F +I +F 
Sbjct: 168 LLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD 227

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++       +      ++  M +DG  PN  TY+ L+  LC   R+  A 
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +L EM  KG  P   +YT  +SS+C +G+V++A  L    G       V  Y A+I+GL
Sbjct: 288 DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  K+E A  +  +M+  G+ PN +TY+ +I+ LC  G    +L I   M   G   N 
Sbjct: 348 FRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANA 407

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST-------------------- 275
            ++  ++KG        +A  ++N+M+++G  P VV Y+T                    
Sbjct: 408 QTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYM 467

Query: 276 ---------------LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
                          LI G C  G +D A S  Y+M +    PN  TY+A+IDG+ K G 
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  ++ RM  NGCS ++  Y  ++  L + N F +A     KM  +   PNT+T+ +
Sbjct: 528 IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLC     + A K+  +M++  CLPN  TY  L+ GL +  +V +A E +TE    G
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV-DAAERLTE---NG 643

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
            +  I TY+T++ G+CR G   EA QL+  M  +G       +  ++ A+CK  KV+ A+
Sbjct: 644 CEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCAL 703

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++ + +   G + P +  Y  L+  +C     +EA    Q +L +    +   W VLV  
Sbjct: 704 EIFNLMAVKG-FQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDG 762

Query: 561 LF 562
           L 
Sbjct: 763 LL 764



 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 160/570 (28%), Positives = 269/570 (47%), Gaps = 45/570 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + S+I  + R    ++A ++F R+ + G  P    Y+ +++ L  E R      +   M
Sbjct: 234 TYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEM 293

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+EP V+TY + + +LC   RVD A  L+  MG KGC+P   +YT I+S + + G++
Sbjct: 294 TEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKM 353

Query: 152 EEA-----RELAMRFGSGVSVYNALINGLCKEHK-------------------------- 180
           E A     + L          YNALIN LC E +                          
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413

Query: 181 ---------IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
                    IE+A  +  +M+  G  P V+TY+T+I      G +  +   L  M    C
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNC 473

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+  ++  L+ G+  GG+   A+  +  M++ G  PN   Y+ +I G C  G +D A+S
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALS 533

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +MEEN C  ++ TY+A+I G +K      A +   +M   G  PN + YT ++  LC
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +N   + A  +  +M  +NC PN  T+ + I GLC  G+VD A +L +      C P I 
Sbjct: 594 KNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTID 649

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY+ L+ GL R  R  EA +LV  +++ G+  ++  Y ++L   C++  V  A ++   M
Sbjct: 650 TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
            ++G +     + ++I A C   +   A+ +   +    +WN D+I +T L+ G+   G 
Sbjct: 710 AVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLL-KKQWNSDLIVWTVLVDGLLQEGD 768

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                 +L  M +    P+  T+ +L R L
Sbjct: 769 SDLCMKFLYLMESRNCTPSLHTYIILAREL 798



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 273/547 (49%), Gaps = 43/547 (7%)

Query: 23  VEGVSCSE-GVFISVINSYR-------RVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           + G+S S+ G+F   + S+        +  +   A  ++ +I   G+KP++  +N +++ 
Sbjct: 147 LHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINI 206

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L  + +      +++ + +  + P+ FTY  L+   C+N ++D A+++   M   GC P+
Sbjct: 207 LCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPN 266

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           +V+Y+T+++ +C  G++ EA +                              +L EM ++
Sbjct: 267 SVTYSTLINGLCNEGRIGEAMD------------------------------MLEEMTEK 296

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI+P V TY+  ISSLCD+G V+ ++ ++  M  +GC+P++ ++T+++ G    G+   A
Sbjct: 297 GIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELA 356

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             ++++M++EG +PN V Y+ LI+ LC+ G    A+ +   ME +    N  TY+ +I G
Sbjct: 357 IGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKG 416

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
                ++  A  ++N+M+ +G SP VV Y  ++    +    + A   +  M   NC P+
Sbjct: 417 LFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPD 476

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+   I G C  G++D A     +M +    PN  TY  ++DG  +  ++  A  L  
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE 536

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            +E+ G   +I TYN I+ G+ +     EA +   KM  +G + + IT+  +I   CK  
Sbjct: 537 RMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNT 596

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
             N A ++   +       P+  +YTSL++G+C  G +  A    +++   G  P   T+
Sbjct: 597 ATNLAFKIFHEMEKKNCL-PNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTY 651

Query: 555 NVLVRSL 561
           + LV  L
Sbjct: 652 STLVSGL 658



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 215/439 (48%), Gaps = 36/439 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           FG  +  +N L+  L K   +  A  +  ++   G+ P+++T++T+I+ LC  G V+ ++
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  ++F     P+  ++TSL+ G+    +  +A ++++RM+++G  PN V YSTLI+GL
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C+ G + EA+ +  +M E    P V TY+  I      G +  A  +   M   GCSP+V
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             YT ++  L +      A  +  KM  E   PNTVT+N  I  LC  GR   A+K+ D 
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW 397

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT---------- 450
           M+ +  L N  TYN+++ GL  ++ +++A  +  ++ K G    +VTYNT          
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 451 -------------------------ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
                                    ++ G C+ G +  A     +ML  G   +  T+  
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  YCK+GK++ A+ L +R+   G  +  I +Y +++ G+       EA  +  KM  +
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENG-CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ 576

Query: 546 GICPNFATWNVLVRSLFSN 564
           G+ PN  T+  L+  L  N
Sbjct: 577 GLQPNTITYTSLINGLCKN 595



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 210/457 (45%), Gaps = 36/457 (7%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I  L +   +D    L++ M  +G S S   + ++I+   R G  E A+ M++++ + GL
Sbjct: 309 ISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGL 368

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P    YN +++ L  E RF +   I+  M+  G   N  TYN ++K L   + ++ A  
Sbjct: 369 VPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMV 428

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLC 176
           +  +M   G +P  V+Y T++    K G +  A R L M   S        Y  LI+G C
Sbjct: 429 VFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  K++ A     EM+  GI PN  TY+ +I   C  G ++ +L +  +M   GC+ +I 
Sbjct: 489 KGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIE 548

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ +++ G   G R  EA     +M  +G  PN + Y++LI+GLC N + + A  + ++M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608

Query: 297 E-------------------------------ENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           E                               EN C P + TYS L+ G  + G    AS
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEAS 668

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           Q+   M   G SP++  Y  ++   C++     A  +   MA +   P+   +   I  L
Sbjct: 669 QLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICAL 728

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           CG  R + A+ +   + + +   ++  +  L+DGLL+
Sbjct: 729 CGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQ 765



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 184/384 (47%), Gaps = 9/384 (2%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A+ +F ++ + G  PTV  YN ++   L     +        MK    EP+  TY  L
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           +   CK  ++D A     EM   G +P+  +YT ++   CK G+++ A  L  R      
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
            + +  YNA+I+GL K ++  EA     +M ++G+ PN ITY+++I+ LC       +  
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFK 603

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  +M  + C PN H++TSL+ G    G+     D   R+   G  P +  YSTL+ GLC
Sbjct: 604 IFHEMEKKNCLPNAHTYTSLIYGLCQEGKV----DAAERLTENGCEPTIDTYSTLVSGLC 659

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G  +EA  +   M+E    P++  Y +L+    K+  +  A +I+N M   G  P++ 
Sbjct: 660 REGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLF 719

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++  LC  +   +A ++ + +  +    + + +   + GL   G  D  MK L  M
Sbjct: 720 IYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLM 779

Query: 402 KQYECLPNITTYNELLDGLLRVNR 425
           +   C P++ TY  L   L +V +
Sbjct: 780 ESRNCTPSLHTYIILARELSKVGK 803



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 170/323 (52%), Gaps = 1/323 (0%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       +M   G+S ++  + ++I+ Y + G  + AL +F R+ E G   +++ YN
Sbjct: 492 KLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYN 551

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+  L   NRFS      + M   G++PN  TY  L+  LCKN   + A+K+  EM  K
Sbjct: 552 AIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK 611

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
            C P+A +YT+++  +C+ G+V+ A  L        +  Y+ L++GLC+E +  EA  L+
Sbjct: 612 NCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLV 671

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M ++G+ P++  Y +++ + C    V+ +L I   M V+G  P++  +  L+      
Sbjct: 672 ENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGV 731

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  EA +++  ++++ +  +++ ++ L+ GL   G  D  +   Y ME  +C P++ TY
Sbjct: 732 SRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTY 791

Query: 309 SALIDGFAKAGNLLGASQIWNRM 331
             L    +K G  +G  QI NR+
Sbjct: 792 IILARELSKVGKSIGTDQIGNRL 814


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 254/460 (55%), Gaps = 9/460 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGS 163
           L+ L +N  ++  +K L  M  +G  PD +  T+++   C++G+ ++A    E+  + G+
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 164 --GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN LI+G CK  +I+ A  +L  M    + P+V+TY+TI+ +LCD G ++ ++ 
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +   + C P++ ++T L++         +A  L + M  +G  P+VV Y+ LI+G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA+     M    C PNV T++ ++      G  + A ++ + M+  GCSP+VV
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++  LC+  +  +A  ++EKM    C PN++++N  + G C   ++D A++ LD M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               C P+I TYN LL  L +  +V  A E++ ++   G    ++TYNT++ G+ + G  
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A +LL +M  +G K D IT++ ++    ++GKV+ AI+    + G G   P+ I+Y S
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG-IRPNAITYNS 479

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G+C S     A  +L  M+++   P  AT+ +L+  +
Sbjct: 480 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 234/421 (55%), Gaps = 8/421 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +++ G  P+V TYN+L+   CK+  +D A ++L  M     APD V+Y TI+ ++C  G+
Sbjct: 118 LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGK 174

Query: 151 VEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++A     R+L       V  Y  LI   CKE  + +A  LL EM ++G  P+V+TY+ 
Sbjct: 175 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 234

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+ +C  G ++ ++  L  M   GC PN+ +   +L+     GR  +A  L + M+R+G
Sbjct: 235 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV ++ LI+ LC  G +  A+ +  +M  + C PN  +Y+ L+ GF K   +  A 
Sbjct: 295 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 354

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +  + M+S GC P++V Y  ++  LC++     A  ++ +++ + C P  +T+NT I GL
Sbjct: 355 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 414

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+ + A+KLLD+M++    P+I TY+ L+ GL R  +V EA +   ++E  GI+ N 
Sbjct: 415 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 474

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TYN+I+ G+C++     A   L  M+ +  K    T+ I+I     +G    A+ LL+ 
Sbjct: 475 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 534

Query: 506 I 506
           +
Sbjct: 535 L 535



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 240/464 (51%), Gaps = 3/464 (0%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P++     L++  C+  +   A  ++  +   G  PD ++Y  ++S  CK G+++ A ++
Sbjct: 90  PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              M     V  YN ++  LC   K+++A  +L   + +   P+VITY+ +I + C    
Sbjct: 150 LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 209

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  ++ +L +M  +G  P++ ++  L+ G    GR  EA    N M   G  PNV+ ++ 
Sbjct: 210 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 269

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++  +CS G   +A  +   M    C P+V T++ LI+   + G L  A  I  +M  +G
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C+PN ++Y  ++   C+     +A   ++ M    C P+ VT+NT +  LC  G+VD A+
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 389

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++L+Q+    C P + TYN ++DGL +V + + A +L+ E+ + G++ +I+TY++++ G+
Sbjct: 390 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 449

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            R G V EA +    +   G + +AIT+N I+   CK  + + AI  L  +       P 
Sbjct: 450 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMI-SKRCKPT 508

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             +YT L+ GI   G  +EA   L ++ + G+    +   V V+
Sbjct: 509 EATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 552



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 207/406 (50%), Gaps = 8/406 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+ Y + G  + AL++  R+    + P V  YN IL  L    +      +     +  
Sbjct: 133 LISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 189

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+V TY IL++A CK + V  A KLL EM NKG  PD V+Y  +++ ICK G+++EA 
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 249

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +      S      V  +N ++  +C   +  +A  LL +M+ +G  P+V+T++ +I+ L
Sbjct: 250 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 309

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G +  ++ IL +M + GC PN  S+  LL G+    +   A +  + M+  G  P++
Sbjct: 310 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 369

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+TL+  LC +G +D AV +  Q+    C P + TY+ +IDG +K G    A ++ + 
Sbjct: 370 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 429

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  P+++ Y+ +V  L +     +A      +      PN +T+N+ + GLC   +
Sbjct: 430 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 489

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            D A+  L  M    C P   TY  L++G+      KEA +L+ E+
Sbjct: 490 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 208/368 (56%), Gaps = 5/368 (1%)

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +E     L  M  RG  P+I   TSL++G+   G+T +A+ +   + + G +P+V+ Y
Sbjct: 71  GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 130

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + LI G C +G +D A+ V  +M   +  P+V TY+ ++     +G L  A ++ +R + 
Sbjct: 131 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 187

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             C P+V+ YT +++  C+ +   QA  L+++M  +   P+ VT+N  I G+C  GR+D 
Sbjct: 188 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 247

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+K L+ M  Y C PN+ T+N +L  +    R  +A +L++++ + G   ++VT+N +++
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +CR G++  A  +L KM + G   +++++N +++ +CK+ K++ AI+ LD +   G + 
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY- 366

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           PDI++Y +LL  +C  G +  A   L ++ ++G  P   T+N ++  L S +G       
Sbjct: 367 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL-SKVGKTERAIK 425

Query: 574 LDDIMANK 581
           L D M  K
Sbjct: 426 LLDEMRRK 433



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 193/397 (48%), Gaps = 43/397 (10%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EID    +L +M V     +   + +++ +    G  +QA+++  R  +    P V  Y 
Sbjct: 142 EIDNALQVLDRMNVAPDVVT---YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYT 198

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A   E+       +   M+  G +P+V TYN+L+  +CK  R+D A K L  M + 
Sbjct: 199 ILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 258

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV------------------- 167
           GC P+ +++  I+ S+C  G+  +A +L    +R G   SV                   
Sbjct: 259 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 318

Query: 168 ------------------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                             YN L++G CKE K++ A   L  MV RG  P+++TY+T++++
Sbjct: 319 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 378

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G V+ ++ IL Q+  +GC+P + ++ +++ G    G+T  A  L + M R+G  P+
Sbjct: 379 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 438

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ YS+L+ GL   G +DEA+   + +E     PN  TY++++ G  K+     A     
Sbjct: 439 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 498

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            MIS  C P    YT +++ +    +  +A  L+ ++
Sbjct: 499 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 178/354 (50%), Gaps = 5/354 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   ++  +     LL +M+ +G       +  +IN   + G  ++A+K    +  +G
Sbjct: 200 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 259

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  +N IL ++ +  R+     + S+M R G  P+V T+NIL+  LC+   +  A 
Sbjct: 260 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 319

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGL 175
            +L +M   GC P+++SY  ++   CK  +++ A E L +    G    +  YN L+  L
Sbjct: 320 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 379

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+ K++ A  +L ++  +G  P +ITY+T+I  L  VG  E ++ +L +M  +G  P+I
Sbjct: 380 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    G+  EA   ++ +   G  PN + Y++++ GLC +   D A+     
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 499

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           M    C P   TY+ LI+G A  G    A  + N + S G      A    VK+
Sbjct: 500 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 553



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 90/165 (54%), Gaps = 5/165 (3%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L  L+R   +++ F+ +  +   G   +I+   +++ G CR G   +A  ++  +   G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D IT+N++I  YCK G+++NA+Q+LDR+       PD+++Y ++L  +C+SG +++A 
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAM 179

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             L + L +   P+  T+ +L+ +     G +G    L D M NK
Sbjct: 180 EVLDRQLQKECYPDVITYTILIEATCKESG-VGQAMKLLDEMRNK 223


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 254/460 (55%), Gaps = 9/460 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGS 163
           L+ L +N  ++  +K L  M  +G  PD +  T+++   C++G+ ++A    E+  + G+
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 164 --GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN LI+G CK  +I+ A  +L  M    + P+V+TY+TI+ +LCD G ++ ++ 
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +   + C P++ ++T L++         +A  L + M  +G  P+VV Y+ LI+G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA+     M    C PNV T++ ++      G  + A ++ + M+  GCSP+VV
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++  LC+  +  +A  ++EKM    C PN++++N  + G C   ++D A++ LD M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               C P+I TYN LL  L +  +V  A E++ ++   G    ++TYNT++ G+ + G  
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A +LL +M  +G K D IT++ ++    ++GKV+ AI+    + G G   P+ I+Y S
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG-IRPNAITYNS 536

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G+C S     A  +L  M+++   P  AT+ +L+  +
Sbjct: 537 IMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 234/421 (55%), Gaps = 8/421 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +++ G  P+V TYN+L+   CK+  +D A ++L  M     APD V+Y TI+ ++C  G+
Sbjct: 175 LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGK 231

Query: 151 VEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++A     R+L       V  Y  LI   CKE  + +A  LL EM ++G  P+V+TY+ 
Sbjct: 232 LKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNV 291

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+ +C  G ++ ++  L  M   GC PN+ +   +L+     GR  +A  L + M+R+G
Sbjct: 292 LINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV ++ LI+ LC  G +  A+ +  +M  + C PN  +Y+ L+ GF K   +  A 
Sbjct: 352 CSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAI 411

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +  + M+S GC P++V Y  ++  LC++     A  ++ +++ + C P  +T+NT I GL
Sbjct: 412 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 471

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+ + A+KLLD+M++    P+I TY+ L+ GL R  +V EA +   ++E  GI+ N 
Sbjct: 472 SKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNA 531

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TYN+I+ G+C++     A   L  M+ +  K    T+ I+I     +G    A+ LL+ 
Sbjct: 532 ITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNE 591

Query: 506 I 506
           +
Sbjct: 592 L 592



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 240/464 (51%), Gaps = 3/464 (0%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P++     L++  C+  +   A  ++  +   G  PD ++Y  ++S  CK G+++ A ++
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              M     V  YN ++  LC   K+++A  +L   + +   P+VITY+ +I + C    
Sbjct: 207 LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 266

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  ++ +L +M  +G  P++ ++  L+ G    GR  EA    N M   G  PNV+ ++ 
Sbjct: 267 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 326

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++  +CS G   +A  +   M    C P+V T++ LI+   + G L  A  I  +M  +G
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C+PN ++Y  ++   C+     +A   ++ M    C P+ VT+NT +  LC  G+VD A+
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 446

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++L+Q+    C P + TYN ++DGL +V + + A +L+ E+ + G++ +I+TY++++ G+
Sbjct: 447 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 506

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            R G V EA +    +   G + +AIT+N I+   CK  + + AI  L  +       P 
Sbjct: 507 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMI-SKRCKPT 565

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             +YT L+ GI   G  +EA   L ++ + G+    +   V V+
Sbjct: 566 EATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 609



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 207/406 (50%), Gaps = 8/406 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+ Y + G  + AL++  R+    + P V  YN IL  L    +      +     +  
Sbjct: 190 LISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE 246

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+V TY IL++A CK + V  A KLL EM NKG  PD V+Y  +++ ICK G+++EA 
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAI 306

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +      S      V  +N ++  +C   +  +A  LL +M+ +G  P+V+T++ +I+ L
Sbjct: 307 KFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFL 366

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G +  ++ IL +M + GC PN  S+  LL G+    +   A +  + M+  G  P++
Sbjct: 367 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 426

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+TL+  LC +G +D AV +  Q+    C P + TY+ +IDG +K G    A ++ + 
Sbjct: 427 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 486

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  P+++ Y+ +V  L +     +A      +      PN +T+N+ + GLC   +
Sbjct: 487 MRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQ 546

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            D A+  L  M    C P   TY  L++G+      KEA +L+ E+
Sbjct: 547 TDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 208/368 (56%), Gaps = 5/368 (1%)

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +E     L  M  RG  P+I   TSL++G+   G+T +A+ +   + + G +P+V+ Y
Sbjct: 128 GELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITY 187

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + LI G C +G +D A+ V  +M   +  P+V TY+ ++     +G L  A ++ +R + 
Sbjct: 188 NVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQ 244

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             C P+V+ YT +++  C+ +   QA  L+++M  +   P+ VT+N  I G+C  GR+D 
Sbjct: 245 KECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDE 304

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+K L+ M  Y C PN+ T+N +L  +    R  +A +L++++ + G   ++VT+N +++
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +CR G++  A  +L KM + G   +++++N +++ +CK+ K++ AI+ LD +   G + 
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCY- 423

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           PDI++Y +LL  +C  G +  A   L ++ ++G  P   T+N ++  L S +G       
Sbjct: 424 PDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL-SKVGKTERAIK 482

Query: 574 LDDIMANK 581
           L D M  K
Sbjct: 483 LLDEMRRK 490



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 193/397 (48%), Gaps = 43/397 (10%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EID    +L +M V     +   + +++ +    G  +QA+++  R  +    P V  Y 
Sbjct: 199 EIDNALQVLDRMNVAPDVVT---YNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYT 255

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A   E+       +   M+  G +P+V TYN+L+  +CK  R+D A K L  M + 
Sbjct: 256 ILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 315

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV------------------- 167
           GC P+ +++  I+ S+C  G+  +A +L    +R G   SV                   
Sbjct: 316 GCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRA 375

Query: 168 ------------------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                             YN L++G CKE K++ A   L  MV RG  P+++TY+T++++
Sbjct: 376 IDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTA 435

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G V+ ++ IL Q+  +GC+P + ++ +++ G    G+T  A  L + M R+G  P+
Sbjct: 436 LCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPD 495

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ YS+L+ GL   G +DEA+   + +E     PN  TY++++ G  K+     A     
Sbjct: 496 IITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLA 555

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            MIS  C P    YT +++ +    +  +A  L+ ++
Sbjct: 556 YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 178/354 (50%), Gaps = 5/354 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   ++  +     LL +M+ +G       +  +IN   + G  ++A+K    +  +G
Sbjct: 257 LIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYG 316

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  +N IL ++ +  R+     + S+M R G  P+V T+NIL+  LC+   +  A 
Sbjct: 317 CQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAI 376

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGL 175
            +L +M   GC P+++SY  ++   CK  +++ A E L +    G    +  YN L+  L
Sbjct: 377 DILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTAL 436

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+ K++ A  +L ++  +G  P +ITY+T+I  L  VG  E ++ +L +M  +G  P+I
Sbjct: 437 CKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    G+  EA   ++ +   G  PN + Y++++ GLC +   D A+     
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 556

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           M    C P   TY+ LI+G A  G    A  + N + S G      A    VK+
Sbjct: 557 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAVKM 610



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 90/165 (54%), Gaps = 5/165 (3%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L  L+R   +++ F+ +  +   G   +I+   +++ G CR G   +A  ++  +   G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D IT+N++I  YCK G+++NA+Q+LDR+       PD+++Y ++L  +C+SG +++A 
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILRTLCDSGKLKQAM 236

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             L + L +   P+  T+ +L+ +     G +G    L D M NK
Sbjct: 237 EVLDRQLQKECYPDVITYTILIEATCKESG-VGQAMKLLDEMRNK 280


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 172/539 (31%), Positives = 265/539 (49%), Gaps = 15/539 (2%)

Query: 39  SYRRVGLAEQAL--KMFYR-IREFGLK--PTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           S RR    E  L   +F R IRE  +K  P +  Y+ ++       R       +  + +
Sbjct: 63  SGRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILK 122

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVE 152
            G   N    N LLK LC   R+  A  +L++ M   GC PD VSY T++   C   + E
Sbjct: 123 SGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAE 182

Query: 153 EARELAMRFGSG--------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           EA EL               V  Y  +ING   E ++++A+ L  EM+DRGI PNV+TY+
Sbjct: 183 EALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYT 242

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I  LC    V+ + G+  QM  +G  P+  ++  L+ GYL  G+  E   +   M   
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+   Y +L++ LC+NG   EA      M      PNV  Y  LI G+A  G L   
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             + N M+ NG SP+   +  +     +  M  +A  +  KM  +   P+ V F   I  
Sbjct: 363 HDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDA 422

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC  GRVD A+   +QM      PNI  +N L+ GL  V++ ++A E   E+   GI+ +
Sbjct: 423 LCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPD 482

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +V +NTIL  +C  G V++A +L+  M   GT+ D I++  +I  +C  G+++ A + LD
Sbjct: 483 VVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLD 542

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            +   G   PD  +Y +LL G C +G + +A+   ++ML  GI P   T++ ++  LF+
Sbjct: 543 VMLSVG-LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/574 (27%), Positives = 276/574 (48%), Gaps = 47/574 (8%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRD 94
           +I  + R+G  E     F  I + G +    + N +L  L    R    ++ +   M   
Sbjct: 100 LIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPEL 159

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN---KGCAPDAVSYTTIVSSICKLGQV 151
           G  P+V +YN LLK  C   R + A +LL  M +   + C P+ VSY T+++     GQV
Sbjct: 160 GCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQV 219

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A  L +          V  Y  +I+GLCK   ++ A  +  +M+D+G+ P+  TY+ +
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCL 279

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I     +G  +  + +L +M   G  P+ +++ SLL      GR  EA   ++ MIR+G 
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGI 339

Query: 267 LPNVVAYSTLIHGLCSNGSM-----------------------------------DEAVS 291
            PNV  Y  LIHG  + G++                                   DEA+ 
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M++    P+V  + ALID   K G +  A   +N+M++ G +PN+  +  +V  LC
Sbjct: 400 IFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
             + + +A     +M  +   P+ V FNT +  LC  G+V  A +L+D M++    P++ 
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVI 519

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +Y  L+ G   V R+ EA + +  +   G++ +  TYNT+LHG CRAG + +A+ +  +M
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSG 530
           L  G     +T++ I++      + + A +L L+ I  G +WN  I  Y  +L G+  + 
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN--IWIYNIILNGLSKNN 637

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            + EAF   Q + ++       T+N+++ +LF +
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKS 671



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 248/560 (44%), Gaps = 44/560 (7%)

Query: 46  AEQALKMFYRIREF---GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           AE+AL++ + + +       P V  Y  +++    E +      ++  M   G++PNV T
Sbjct: 181 AEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVT 240

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRF 161
           Y  ++  LCK   VD A  +  +M +KG  PD  +Y  ++     +G+ +E  R L    
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
             G+      Y +L+N LC   +  EA +    M+ +GI PNV  Y  +I      G + 
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALS 360

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
               +L  M   G +P+ H F  +   Y       EA  ++N+M ++G  P+VV +  LI
Sbjct: 361 EMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALI 420

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC  G +D+AV    QM      PN+  +++L+ G         A + +  M++ G  
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+VV +  ++  LC      +A  LI+ M      P+ +++ T I G C  GR+D A K 
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKS 540

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH---- 453
           LD M      P+  TYN LL G  R  R+ +A+ +  E+ + GI   +VTY+TILH    
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 454 -------------------------------GVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
                                          G+ +   V EAF+L   +  +  +L+  T
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           FNI+I A  K G+  +A+ L   I   G   PD+ +Y  +   +   G ++E       M
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYG-LVPDVFTYCLIAENLIEEGYLEEFDDLFSAM 719

Query: 543 LNEGICPNFATWNVLVRSLF 562
              G  PN    N LVR L 
Sbjct: 720 EKSGTTPNSRMLNALVRRLL 739



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 248/499 (49%), Gaps = 5/499 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L++M   G+      + S++N     G   +A   F  +   G+KP V IY  ++ 
Sbjct: 292 VVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIH 351

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               +   S ++ + + M  +G+ P+   +NI+  A  K   +D A  +  +M  +G +P
Sbjct: 352 GYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSP 411

Query: 134 DAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           D V++  ++ ++CKLG+V++A  +       GV+    V+N+L+ GLC   K E+A    
Sbjct: 412 DVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFY 471

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM+++GI P+V+ ++TI+ +LC  G V  +  ++  M   G  P++ S+T+L+ G+ L 
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLV 531

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR  EA+   + M+  G  P+   Y+TL+HG C  G +D+A  V  +M  N   P V TY
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S ++ G         A +++  MI++G   N+  Y  ++  L +NN   +A  L + +  
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           ++      TFN  I  L   GR + AM L   +  Y  +P++ TY  + + L+    ++E
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
             +L + +EK G   N    N ++  +   G +  A   L K+  +   L+A T  ++I 
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771

Query: 489 AYCKQGKVNNAIQLLDRIR 507
              +    ++A  L ++ R
Sbjct: 772 LLSRDEYHHHATSLPEKYR 790



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 258/563 (45%), Gaps = 6/563 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L  +M   G+  +   + +VI+   +  + ++A  +F ++ + G+KP    YN
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++   L+  ++  +  +   M   G++P+ +TY  LL  LC N R   A      M  K
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRK 337

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEA 184
           G  P+   Y  ++      G + E  +L  +   +G+S    ++N +     K+  I+EA
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M  +G+ P+V+ +  +I +LC +G V+ ++    QM   G  PNI  F SL+ G
Sbjct: 398 MHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  +A + +  M+ +G  P+VV ++T++  LC+ G + +A  +   ME     P+
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPD 517

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V +Y+ LI G    G +  A++  + M+S G  P+   Y  ++   C+      A+ +  
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P  VT++T + GL    R   A +L   M       NI  YN +L+GL + N
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V EAF+L   +     QL I T+N ++  + ++G   +A  L   +   G   D  T+ 
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYC 697

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           +I     ++G +     L   +   G   P+     +L+  + + G +  A  YL K+  
Sbjct: 698 LIAENLIEEGYLEEFDDLFSAMEKSGT-TPNSRMLNALVRRLLHRGDITRAGAYLSKLDE 756

Query: 545 EGICPNFATWNVLVRSLFSNLGH 567
           +      +T  +L+  L  +  H
Sbjct: 757 KNFSLEASTTAMLISLLSRDEYH 779



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 195/408 (47%), Gaps = 5/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     K  +  +  LL  M   G+S    +F  +  +Y +  + ++A+ +F ++++ G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +  ++DAL    R       ++ M  +G+ PN+F +N L+  LC  ++ + A 
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVSV--YNALINGL 175
           +   EM N+G  PD V + TI+ ++C  GQV +A+   +L  R G+   V  Y  LI G 
Sbjct: 469 EFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGH 528

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +I+EA   L  M+  G+ P+  TY+T++   C  G ++ + G+  +M   G  P +
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++++L G     R  EA +L+  MI  G   N+  Y+ +++GL  N  +DEA  +   
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +        +TT++ +I    K+G    A  ++  + S G  P+V  Y  + + L +   
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             +   L   M      PN+   N  ++ L   G +  A   L ++ +
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDE 756


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 164/557 (29%), Positives = 271/557 (48%), Gaps = 29/557 (5%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+  F R+      P+   +N +L ++      S +  +   M   G+ PN++T +IL+ 
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGS 163
           + C  NRV  A+ +L ++   G  PD  ++TT++  IC  G++ EA  L  +     F  
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            V  Y  LINGLCK      A  LL  MV +   PNV  Y+TII SLC    V  +  + 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M  +G +P+I ++ SL+            + L N M+    +P+VV+++T++  LC  
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G + EA  V  +M +    PNV TY+AL+DG      +  A ++++ M+  GC PNV++Y
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 344 TCMVKVLCQ----NNMFH---------------QAHSLIEKMAFENCPPNTVTFNTFIKG 384
             ++   C+    +   H               +A  + + M  + C PN +++NT I G
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C   R+D AM L  +M + E +P+  TY+ L+ GL  V R+++A  L  E+  C    N
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA--ITFNIIIYAYCKQGKVNNAIQL 502
           +VTY  +L  +C+   + EA  LL    IEG+ LD      NI I   C+ G++  A  L
Sbjct: 465 LVTYRILLDYLCKNRYLAEAMALLKA--IEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              +   G   PD+ +Y+ ++ G+C  G + EA    ++M   G   N   +N + R   
Sbjct: 523 FSNLSSKG-LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 581

Query: 563 SNLGHLGPVYILDDIMA 579
            N      + +L +++A
Sbjct: 582 RNNETSRAIQLLQEMVA 598



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 272/550 (49%), Gaps = 22/550 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM   G+  +      +INS+  +     A  +  +I + G +P    +  ++  + 
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIC 142

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G  P+V TY  L+  LCK      A +LL  M  K C P+  
Sbjct: 143 VEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF 202

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y TI+ S+CK  QV EA  L +     G+S     YN+LI+ LC   + +    LL EM
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           VD  I P+V++++T++ +LC  G V  +  ++ +M  RG  PN+ ++T+L+ G+ L    
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ M+ +G +PNV++Y+TLI+G C    +D+A+                 Y+ L
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH----------------YTXL 366

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +D      N+  A ++++ M+  GC PNV++Y  ++   C+     +A  L  +M  +  
Sbjct: 367 MDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 426

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+TVT++T I GLC   R+  A+ L  +M     +PN+ TY  LLD L +   + EA  
Sbjct: 427 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMA 486

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+  IE   +  +I   N  + G+CRAG +  A  L   +  +G + D  T++I+I   C
Sbjct: 487 LLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLC 546

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           ++G ++ A +L   +   G      I Y ++  G   +     A   LQ+M+  G   + 
Sbjct: 547 RRGLLDEASKLFREMDENGCTLNGCI-YNTITRGFLRNNETSRAIQLLQEMVARGFSADA 605

Query: 552 ATWNVLVRSL 561
           +T  + V+ L
Sbjct: 606 STMTLFVKML 615



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 256/528 (48%), Gaps = 27/528 (5%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
             F ++I      G   +AL +F ++   G +P V  Y  +++ L      S    +  +
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M +   +PNVF YN ++ +LCK+ +V  A+ L  EM  KG +PD  +Y +++ ++C L +
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            +    L       +    V  +N +++ LCKE K+ EA  ++ +M+ RG++PNV+TY+ 
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH------------- 252
           ++   C +  ++ ++ +   M  +GC PN+ S+ +L+ GY    R               
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC 371

Query: 253 ------EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                 EA  +++ M+ +G +PNV++Y+TLI+G C    +D+A+ +  +M      P+  
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TYS LI G      L  A  +++ M++    PN+V Y  ++  LC+N    +A +L++ +
Sbjct: 432 TYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI 491

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
              N  P+    N  I G+C  G ++ A  L   +      P++ TY+ +++GL R   +
Sbjct: 492 EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLL 551

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA +L  E+++ G  LN   YNTI  G  R      A QLL +M+  G   DA T  + 
Sbjct: 552 DEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLF 611

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           +      G   +  Q+L   R G +W     S +S    I   G   E
Sbjct: 612 VKMLSDDGLDQSLKQIL---RNGCKWISTFDSSSSTGLHILQKGISHE 656



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 227/477 (47%), Gaps = 24/477 (5%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M  EG       + ++IN   +VG    A+++   + +   +P V  YN I+D+L
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + + +    ++S M   G+ P++FTYN L+ ALC          LL EM +    PD 
Sbjct: 212 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           VS+ T+V ++CK G+V EA ++  +         V  Y AL++G C   +++EA  +   
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331

Query: 191 MVDRGIDPNVITYSTIISSLCDVG-------------------NVETSLGILGQMFVRGC 231
           MV +G  PNVI+Y+T+I+  C +                    N++ ++ +   M  +GC
Sbjct: 332 MVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGC 391

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN+ S+ +L+ GY    R  +A  L+  M R+  +P+ V YSTLIHGLC    + +A++
Sbjct: 392 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 451

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           + ++M   S  PN+ TY  L+D   K   L  A  +   +  +   P++      +  +C
Sbjct: 452 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 511

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +      A  L   ++ +   P+  T++  I GLC  G +D A KL  +M +  C  N  
Sbjct: 512 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 571

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            YN +  G LR N    A +L+ E+   G   +  T    +  +   G+     Q+L
Sbjct: 572 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 628



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 30/382 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L   CE   V  LL +M    +      F +V+++  + G   +A  +  ++ + G
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG-- 118
           ++P V  Y  ++D     +       ++  M   G  PNV +YN L+   CK  R+D   
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAI 361

Query: 119 -----------------AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
                            A K+   M  KGC P+ +SY T+++  CK+ ++++A  L   F
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL---F 418

Query: 162 GS--------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           G             Y+ LI+GLC   ++++A  L  EMV     PN++TY  ++  LC  
Sbjct: 419 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 478

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             +  ++ +L  +     +P+I      + G    G    A DL++ +  +G  P+V  Y
Sbjct: 479 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 538

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S +I+GLC  G +DEA  +  +M+EN C  N   Y+ +  GF +      A Q+   M++
Sbjct: 539 SIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 598

Query: 334 NGCSPNVVAYTCMVKVLCQNNM 355
            G S +    T  VK+L  + +
Sbjct: 599 RGFSADASTMTLFVKMLSDDGL 620



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 138/274 (50%), Gaps = 1/274 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++D A+S   +M     PP+   ++ L+   AK  +      + ++M S G  PN+    
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C  N    A S++ K+      P+T TF T I+G+C  G++  A+ L D+M   
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE 160

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P++ TY  L++GL +V     A  L+  + +   Q N+  YNTI+  +C+   V EA
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           F L  +M+ +G   D  T+N +I+A C   +  +   LL+ +    +  PD++S+ +++ 
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV-DSKIMPDVVSFNTVVD 279

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +C  G + EA   + KM+  G+ PN  T+  L+
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALM 313



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 1/208 (0%)

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           N    A S   +M     PP+TV FN  +  +         + L  QM  +   PNI T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + L++    +NRV  AF ++ +I K G Q +  T+ T++ G+C  G + EA  L  KM+ 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIG 159

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           EG + D +T+  +I   CK G  + AI+LL  +       P++ +Y +++  +C    + 
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN-CQPNVFAYNTIIDSLCKDRQVT 218

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           EAF    +M+ +GI P+  T+N L+ +L
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHAL 246



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 113/257 (43%), Gaps = 13/257 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID   YL  +M  + +      + ++I+    V   + A+ +F+ +      P +  Y 
Sbjct: 410 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 469

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD L      +    +   ++   ++P++   NI +  +C+   ++ A  L   + +K
Sbjct: 470 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEA 184
           G  PD  +Y+ +++ +C+ G ++EA +L      +G +    +YN +  G  + ++   A
Sbjct: 530 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 589

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN--PNIHSFTSLL 242
             LL EMV RG   +  T +  +  L D G  ++    L Q+   GC       S +S  
Sbjct: 590 IQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS----LKQILRNGCKWISTFDSSSSTG 645

Query: 243 KGYLLGGRTHE--ASDL 257
              L  G +HE   SDL
Sbjct: 646 LHILQKGISHERNESDL 662


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 156/520 (30%), Positives = 266/520 (51%), Gaps = 6/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P+   +N +L ++    ++  +  + + M   G+ P+V+T NIL
Sbjct: 49  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 108

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C  NR   A+ +L ++   G  PD  ++TT++  +C  G++ +A  L  +     F
Sbjct: 109 INSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 168

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      P+V+ Y++II SLC    V  +  
Sbjct: 169 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 228

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G +P+I ++TSL+            + L N+MI    +P+VV +ST++  LC
Sbjct: 229 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 288

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M      PNV TY+AL+DG      +  A ++++ M+ NG +PNV+
Sbjct: 289 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 348

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   C+     +A  L E+M  +   PNTVT+NT + GLC  GR+  A+ L  +M
Sbjct: 349 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM 408

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             +  +P++ TY  LLD L + + + EA  L+  IE   +  +I  Y  ++ G+CRAG +
Sbjct: 409 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 468

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  +   +  +G + +  T+ I+I   C++G ++ A +L   + G G  +PD  +Y +
Sbjct: 469 EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG-CSPDGCTYNT 527

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  G+  +     A   LQ+ML  G   + +T  +LV  L
Sbjct: 528 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 247/492 (50%), Gaps = 5/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM   G+         +INS+  +     A  +  +I + GL+P    +  ++  L 
Sbjct: 89  LSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLC 148

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G +PNV TY  L+  LCK    + A +LL  M    C PD V
Sbjct: 149 VEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV 208

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            YT+I+ S+CK  QV EA  L  +  G G+S     Y +LI+ LC   + +    LL +M
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 268

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++  I P+V+ +ST++ +LC  G +  +  ++  M +RG  PN+ ++ +L+ G+ L    
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ M+  G+ PNV++Y+TLI+G C    MD+A  +  +M +    PN  TY+ L
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G    G L  A  +++ M+++G  P++  Y  ++  LC+ +   +A +L++ +   N 
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   +   I G+C  G ++ A  +   +      PN+ TY  +++GL R   + EA +
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 508

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E++  G   +  TYNTI  G+ +    + A QLL +ML  G   D  T  +++   C
Sbjct: 509 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 568

Query: 492 KQGKVNNAIQLL 503
                 +  Q+L
Sbjct: 569 DDKLDQSVKQIL 580



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 245/480 (51%), Gaps = 6/480 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN 114
           ++  FG+ P V   N ++++    NR      + + + + G++P+  T+  L++ LC   
Sbjct: 92  QMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEG 151

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYN 169
           ++  A  L  +M  +G  P+ V+Y T+++ +CK+G    A  L      G     V VY 
Sbjct: 152 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYT 211

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           ++I+ LCK+ ++ EAF L  +MV +GI P++ TY+++I SLC++   +    +L QM   
Sbjct: 212 SIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS 271

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
              P++  F++++      G+  EA D+ + MI  G  PNVV Y+ L+ G C    MDEA
Sbjct: 272 KIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEA 331

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           V V   M  N   PNV +Y+ LI+G+ K   +  A+ ++  M      PN V Y  ++  
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC       A +L  +M      P+  T+   +  LC    +D AM LL  ++     P+
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPD 451

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I  Y  ++DG+ R   ++ A ++ + +   G++ N+ TY  +++G+CR G++ EA +L  
Sbjct: 452 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 511

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M   G   D  T+N I     +  +   AIQLL  +   G ++ D+ + T L+  +C+ 
Sbjct: 512 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG-FSADVSTTTLLVEMLCDD 570



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 214/406 (52%), Gaps = 5/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + +I    +L  +M  EG   +   + ++IN   +VG    A+++   + +  
Sbjct: 143 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 202

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V +Y  I+D+L  + + +    ++S M   G+ P++FTY  L+ +LC         
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGL 175
            LL +M N    PD V ++T+V ++CK G++ EA ++  M    GV      YNAL++G 
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C + +++EA  +   MV  G  PNVI+Y+T+I+  C +  ++ +  +  +M  +   PN 
Sbjct: 323 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G    GR  +A  L++ M+  G +P++  Y  L+  LC    +DEA+++   
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +E ++  P++  Y+ +IDG  +AG L  A  I++ + S G  PNV  YT M+  LC+  +
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 502

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             +A+ L  +M    C P+  T+NT  +GL        A++LL +M
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 171/361 (47%), Gaps = 1/361 (0%)

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++++   S   +   ++ +L    +M      P+   F  LL       +      L N+
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M   G  P+V   + LI+  C       A SV  ++ +    P+  T++ LI G    G 
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  ++++MI  G  PNVV Y  ++  LC+    + A  L+  M   NC P+ V + +
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC   +V  A  L  +M      P+I TY  L+  L  +   K    L+ ++    
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I  ++V ++T++  +C+ G + EA  ++  M+I G + + +T+N ++  +C Q +++ A+
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++ D +   G + P++ISY +L+ G C    M +A    ++M  + + PN  T+N L+  
Sbjct: 333 KVFDTMVHNG-YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391

Query: 561 L 561
           L
Sbjct: 392 L 392



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 96/226 (42%), Gaps = 36/226 (15%)

Query: 372 PP--NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           PP  ++++ N F         +D A+   ++M      P+   +N LL  + +  +    
Sbjct: 27  PPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTV 86

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           F L  +++  GI  ++ T N +++  C       AF +L K+L  G + D  TF  +I  
Sbjct: 87  FSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRG 146

Query: 490 YCKQGKVNNAIQLLDRIRG----------------------------------GGEWNPD 515
            C +GK+ +A+ L D++ G                                   G   PD
Sbjct: 147 LCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 206

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ YTS++  +C    + EAF    KM+ +GI P+  T+  L+ SL
Sbjct: 207 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 74/161 (45%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K  +D    LL+ ++   +     ++  VI+   R G  E A  +F  +   G
Sbjct: 423 LLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG 482

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P V+ Y  +++ L         N ++  M  +G  P+  TYN + + L +N     A 
Sbjct: 483 LRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAI 542

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +LL EM  +G + D  + T +V  +C     +  +++   F
Sbjct: 543 QLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEF 583


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  271 bits (692), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 261/512 (50%), Gaps = 8/512 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L +     G + +L+ M   G+  S   F  V+ SY R G+   AL++   +++ G
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + I N  +  L+  N+          MK  G+EP++ +YN L+K  C  +R+D A 
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +L+ EM  KGC PD VSY T+++ +CK  +VEE + L        ++      YN LI  
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYA 382

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K    ++A   L E  ++G   + + YS ++ S C   N++ +  ++  M+ +GCNP+
Sbjct: 383 LSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPD 442

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+++ G+   G+  EA  +  +M + G  PN V Y+ L++GLC NG   EA  +  
Sbjct: 443 VVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN 502

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             EE+   PN  TYSA++ G  + G L  A  +   MI  G  PN V    +++ LC+N 
Sbjct: 503 VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQ 562

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A   +E+   + C  N V F + I G C  G +D A+ +L+ M      P+  TY 
Sbjct: 563 NVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYT 622

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L D L + +R+ EA EL+ ++   GI    VTY  ++H  C+ G V +  +LL KM+  
Sbjct: 623 TLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI-- 680

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
             +     +N +I   C  G    A +LL ++
Sbjct: 681 ARQPFKTVYNQVIEKLCYFGNREEAEKLLGKV 712



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 243/468 (51%), Gaps = 11/468 (2%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC--APDAVSYTTIVSSICKLGQVEEA-R 155
           +   Y  +L  L K     GA ++L  M  +G   +P+A SY  +  S  + G +  A R
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMV--SYSRAGMLRNALR 253

Query: 156 ELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
            L +   +GV    S+ N  I  L K +K+E+A   L  M   GI+P++++Y+ +I   C
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNV 270
           DV  ++ +L ++ +M  +GC P+  S+ +++       +  E   L   M++    +P+ 
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQ 373

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+TLI+ L  +G  D+A+    + EE     +   YSA++D F K  N+  A  +   
Sbjct: 374 VTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVID 433

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M S GC+P+VV YT ++   C+     +A  ++++M    C PNTVT+   + GLC  G+
Sbjct: 434 MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              A ++++  +++   PN  TY+ ++ GL R  ++ EA +L  E+ + G   N V  N 
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINL 553

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++  +CR   VV A + L + L +G  ++ + F  +IY +C+ G ++ A+ +L+ +    
Sbjct: 554 LIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSN 613

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + +PD I+YT+L   +     + EA   + KML +GI P   T+  ++
Sbjct: 614 K-HPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVI 660



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 210/434 (48%), Gaps = 7/434 (1%)

Query: 134 DAVSYTTIVSSICKLGQVEEARE---LAMRFG--SGVSVYNALINGLCKEHKIEEAFWLL 188
           DA+ Y T++  + K    + AR    L  R G       ++ ++    +   +  A  +L
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M   G++P++   +T I  L     +E +L  L +M V G  P+I S+  L+KGY   
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS-CPPNVTT 307
            R  +A +L   M  +G  P+ V+Y T++  LC +  ++E   +   M +NS   P+  T
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVT 375

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ LI   +K G+   A          G   + V Y+ +V   C+N    +A SL+  M 
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY 435

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            + C P+ VT+   I G C  G++D A K+L QM ++ C PN  TY  LL+GL    +  
Sbjct: 436 SKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSL 495

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA E++   E+     N +TY+ ++HG+ R G + EA  L  +M+ +G   + +  N++I
Sbjct: 496 EAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLI 555

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            + C+   V  A + L+     G    +++++TS+++G C  G +  A   L+ M     
Sbjct: 556 QSLCRNQNVVGAKKYLEECLHKG-CAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNK 614

Query: 548 CPNFATWNVLVRSL 561
            P+  T+  L  +L
Sbjct: 615 HPDAITYTTLFDAL 628



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 184/381 (48%), Gaps = 2/381 (0%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           + I Y T++  L      + +  IL  M  RG   +  +F+ ++  Y   G    A  + 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRIL 255

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M + G  P++   +T I+ L     +++A+    +M+     P++ +Y+ LI G+   
Sbjct: 256 TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDV 315

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF-ENCPPNTVT 377
             +  A ++   M   GC P+ V+Y  ++  LC++    +   L+E M    N  P+ VT
Sbjct: 316 HRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVT 375

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +NT I  L   G  D A+  L + ++     +   Y+ ++D   +   + +A  LV ++ 
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY 435

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             G   ++VTY  I+ G CR G + EA ++L +M   G K + +T+ +++   C  GK  
Sbjct: 436 SKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSL 495

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A ++++ +     W P+ I+Y++++ G+   G + EA    ++M+ +G  PN    N+L
Sbjct: 496 EAREMIN-VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLL 554

Query: 558 VRSLFSNLGHLGPVYILDDIM 578
           ++SL  N   +G    L++ +
Sbjct: 555 IQSLCRNQNVVGAKKYLEECL 575



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 155/360 (43%), Gaps = 44/360 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +ID  + +LQQM   G   +   +  ++N     G + +A +M     E    P    Y+
Sbjct: 458 KIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYS 517

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E + S    +   M   G  PN    N+L+++LC+N  V GA K L E  +K
Sbjct: 518 AVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHK 577

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE------LAMRFGSGVSVYNALINGLCKEHKIEE 183
           GCA + V++T+++   C++G ++ A        L+ +    ++ Y  L + L K+ +++E
Sbjct: 578 GCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAIT-YTTLFDALGKKSRLDE 636

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ +M+ +GIDP  +TY  +I   C  G V+  + +L +M  R              
Sbjct: 637 ASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ------------- 683

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                                   P    Y+ +I  LC  G+ +EA  +  ++   +   
Sbjct: 684 ------------------------PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKL 719

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  T   LI+ +   GN L A ++  +M      P++     + K L  + M  +A  L+
Sbjct: 720 DAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLM 779



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/161 (19%), Positives = 71/161 (44%), Gaps = 2/161 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           + + LG+K  +D    L+ +M  +G+  +   + +VI+ + + G  +  +K+  ++    
Sbjct: 624 LFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKM--IA 681

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P   +YN +++ L           +   + R   + +  T +IL+++   +     AY
Sbjct: 682 RQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNALSAY 741

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           K+  +M  +   PD      +   +   G   EA +L +RF
Sbjct: 742 KVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRF 782


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 262/482 (54%), Gaps = 12/482 (2%)

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           +PI  N  R   E   F  NI L+ L +N  ++   K L  M  +G  PD ++ T+++  
Sbjct: 94  SPIGVNGSRSFEE---FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRG 150

Query: 145 ICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            C+ G+ ++A R + +   SG    V  YN LI G CK  +I++A  +L  M    + P+
Sbjct: 151 FCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPD 207

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY+TI+ SLCD G ++ ++ +L +   R C P++ ++T L++         +A  L +
Sbjct: 208 VVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLD 267

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M ++G  P+VV Y+ LI+G+C  G +DEA+     M    C PNV T++ ++      G
Sbjct: 268 EMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTG 327

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             + A ++ + M+  GCSP+VV +  ++  LC+  +  +A  ++EKM    C PN++++N
Sbjct: 328 RWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYN 387

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + G C   ++D A++ L+ M    C P+I TYN LL  L +  +V  A E++ ++   
Sbjct: 388 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G    ++TYNT++ G+ + G    A +LL +M  +G K D IT++ ++    ++GKV+ A
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEA 507

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           I++   + G     P  ++Y +++ G+C +     A  +L  M+ +G  P  AT+ +L+ 
Sbjct: 508 IKIFHDMEGLS-IKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566

Query: 560 SL 561
            +
Sbjct: 567 GI 568



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 238/451 (52%), Gaps = 8/451 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+ LK   R+   G  P V     ++       +      I   ++  G  P+V 
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RE 156
           TYN+L+   CK+  +D A ++L  M     APD V+Y TI+ S+C  G+++EA     R+
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L       V  Y  LI   C +  + +A  LL EM  +G  P+V+TY+ +I+ +C  G +
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M   GC PN+ +   +L+     GR  +A  L + M+R+G  P+VV ++ L
Sbjct: 295 DEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNIL 354

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+ LC    +  A+ V  +M ++ C PN  +Y+ L+ GF +   +  A +    M+S GC
Sbjct: 355 INFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 414

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  ++  LC++     A  ++ +++ + C P  +T+NT I GL   G+ ++A++
Sbjct: 415 YPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL++M++    P+I TY+ LL GL R  +V EA ++  ++E   I+ + VTYN I+ G+C
Sbjct: 475 LLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 534

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A     A   L  M+ +G K    T+ I+I
Sbjct: 535 KAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 186/349 (53%), Gaps = 9/349 (2%)

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G   + +G+ G         NIH     L+  +  G   E      RMI +G +P+V+A
Sbjct: 89  IGMESSPIGVNGSRSFEEFASNIH-----LRKLVRNGELEEGLKFLERMIYQGDIPDVIA 143

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            ++LI G C +G   +A  +   +E +   P+V TY+ LI G+ K+G +  A ++  RM 
Sbjct: 144 CTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM- 202

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
               +P+VV Y  +++ LC +    +A  ++++     C P+ +T+   I+  C    V 
Sbjct: 203 --SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVG 260

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            AMKLLD+M++  C P++ TYN L++G+ +  R+ EA + +  +   G + N++T+N IL
Sbjct: 261 QAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIIL 320

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C  G  ++A +LL  ML +G     +TFNI+I   C++  +  AI +L+++   G  
Sbjct: 321 RSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG-C 379

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            P+ +SY  LL G C    M  A  YL+ M++ G  P+  T+N L+ +L
Sbjct: 380 VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTAL 428



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 188/379 (49%), Gaps = 43/379 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EID    +L++M    V+     + +++ S    G  ++A+++  R  +    P V  Y 
Sbjct: 191 EIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYT 247

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A   ++       +   M++ G +P+V TYN+L+  +CK  R+D A K L  M + 
Sbjct: 248 ILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSY 307

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV------------------- 167
           GC P+ +++  I+ S+C  G+  +A  L    +R G   SV                   
Sbjct: 308 GCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRA 367

Query: 168 ------------------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                             YN L++G C+E K++ A   L  MV RG  P+++TY+T++++
Sbjct: 368 IDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 427

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G V+ ++ IL Q+  +GC+P + ++ +++ G    G+T  A +L   M R+G  P+
Sbjct: 428 LCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPD 487

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ YSTL+ GL   G +DEA+ + + ME  S  P+  TY+A++ G  KA     A     
Sbjct: 488 IITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLA 547

Query: 330 RMISNGCSPNVVAYTCMVK 348
            M+  GC P    YT +++
Sbjct: 548 YMVEKGCKPTEATYTILIE 566



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 160/305 (52%), Gaps = 5/305 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G       +  +IN   + G  ++A+K    +  +G KP V  +N IL ++ 
Sbjct: 265 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMC 324

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R+     + S+M R G  P+V T+NIL+  LC+   +  A  +L +M   GC P+++
Sbjct: 325 STGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSL 384

Query: 137 SYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  ++   C+  +++ A E L +    G    +  YN L+  LCK+ K++ A  +L ++
Sbjct: 385 SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQL 444

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G  P +ITY+T+I  L  VG  E ++ +L +M  +G  P+I ++++LL+G    G+ 
Sbjct: 445 SSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKV 504

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ M      P+ V Y+ ++ GLC       A+     M E  C P   TY+ L
Sbjct: 505 DEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTIL 564

Query: 312 IDGFA 316
           I+G A
Sbjct: 565 IEGIA 569



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 126/232 (54%), Gaps = 4/232 (1%)

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ L +N    +    +E+M ++   P+ +   + I+G C  G+   A ++++ ++    
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ TYN L+ G  +   + +A E+   +E+  +  ++VTYNTIL  +C +G + EA +
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAME 229

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L + L      D IT+ I+I A C    V  A++LLD +R  G   PD+++Y  L+ GI
Sbjct: 230 VLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG-CKPDVVTYNVLINGI 288

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           C  G + EA  +L  M + G  PN  T N+++RS+ S    +    +L D++
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDML 340



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 68/136 (50%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    +L Q+  +G S     + +VI+   +VG  E A+++   +R  GLKP +  Y+
Sbjct: 433 KVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYS 492

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L  E +      I+ +M+   ++P+  TYN ++  LCK  +   A   L  M  K
Sbjct: 493 TLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 552

Query: 130 GCAPDAVSYTTIVSSI 145
           GC P   +YT ++  I
Sbjct: 553 GCKPTEATYTILIEGI 568


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/534 (29%), Positives = 277/534 (51%), Gaps = 9/534 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++  Y R G  E A ++   +    + P    Y  ++ AL A  R +    +   M R 
Sbjct: 95  AMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 151

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P    Y+++L+A C+      A ++L ++  +GCA D  +   ++++IC  G V++A
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKA 211

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L     S      V  YNA++ GLC   +      L+ EMV     PN++T++T+IS 
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G  E    +L QM   GC P+I  + +++ G    G    A ++ NRM   G  PN
Sbjct: 272 LCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPN 331

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+TL+ GLCS    +E   +  +M +  CP +  T++ L+D F + G +    ++  
Sbjct: 332 VVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLE 391

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M+ +GC P+V+ YT ++   C+  +  +A  L++ M    C PNT+++   +KGLC   
Sbjct: 392 QMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAE 451

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R   A  L+ QM Q  C  N  T+N L++ L +   V++A EL+ ++   G   ++++Y+
Sbjct: 452 RWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYS 511

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T++ G+ +AG   EA +LL  M+ +G   + I ++ I  A  ++G++N  IQ+ D I+  
Sbjct: 512 TVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ-D 570

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
                D + Y +++  +C  G  + A  +L  M++ G  PN +T+ +L+R L S
Sbjct: 571 TTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLAS 624



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 257/464 (55%), Gaps = 9/464 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELA 158
           YN ++   C+  +++ A +L   +      P+A +Y  +V ++C  G++ +A     E+ 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 159 MRFGSGVS-VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            R  + +  +Y+ ++   C+      A  +L ++  RG   +V   + +++++CD G+V+
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +L  +   GC P++ S+ ++LKG  +  R     +L   M+R    PN+V ++TLI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC NG  +    V  QM E+ C P++  Y+ +IDG  K G+L  A +I NRM S G  
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  ++K LC    + +   L+ +M  ++CP + VTFN  +   C  G VD  ++L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+QM  + C+P++ TY  +++G  +   + EA  L+  +  CG + N ++Y  +L G+C 
Sbjct: 390 LEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           A   V+A  L+ +M+ +G  L+ ITFN +I   CK+G V  AI+LL ++   G  +PD+I
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLI 508

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SY++++ G+  +G   EA   L  M+N+G+ PN   ++ +  +L
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 235/503 (46%), Gaps = 30/503 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ +   G +   G    V+N+    G  ++AL +   +  FG +P V  YN +L  L 
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC 238

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  +   M R    PN+ T+N L+  LC+N   +  +++L +M   GC PD  
Sbjct: 239 MAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIR 298

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y TI                              I+G+CKE  ++ A  +L  M   G+
Sbjct: 299 MYATI------------------------------IDGICKEGHLKVAHEILNRMPSYGL 328

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNV+ Y+T++  LC     E +  +L +MF + C  +  +F  L+  +   G      +
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L  +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            A   + A  + ++MI  GC  N + +  ++  LC+  +  QA  L+++M    C P+ +
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +++T I GL   G+ D A++LL+ M      PN   Y+ +   L R  R+ +  ++   I
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +   I+ + V YN ++  +C+ G    A + L  M+  G   +  T+ I+I     +G V
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 497 NNAIQLLDRIRGGGEWNPDIISY 519
             A ++L  +   G     ++ +
Sbjct: 629 KEAQEMLTELCSKGALRKHLMKH 651



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 186/358 (51%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ ++I+   + G  + A ++  R+  +GLKP V  YN +L 
Sbjct: 281 VHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLK 340

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + + M       +  T+NIL+   C+N  VD   +LL +M   GC P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMP 400

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     A         Y  ++ GLC   +  +A  L+
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G   N IT++T+I+ LC  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 461 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 520

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G +++ + +   +++ +   +   Y
Sbjct: 521 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 580

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K G    A +    M+S+GC PN   YT +++ L       +A  ++ ++
Sbjct: 581 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTEL 638



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 134/262 (51%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM V G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G   N  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ +EA EL  +    G+S    +Y+++ + L +E +I +  
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  I  + + Y+ +ISSLC  G  E ++  L  M   GC PN  ++T L++G 
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA ++   +  +G L
Sbjct: 623 ASEGFVKEAQEMLTELCSKGAL 644



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 81/157 (51%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  ++    LL+QM V G S     + +VI+   + G  ++AL++   +   G
Sbjct: 478 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 537

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IY+ I  AL  E R + +  ++ N++   +  +   YN ++ +LCK    + A 
Sbjct: 538 MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAI 597

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           + L  M + GC P+  +YT ++  +   G V+EA+E+
Sbjct: 598 EFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEM 634



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + D    LL  M  +G+S +  ++ S+ ++  R G   + ++MF  I++  
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L             + M   G  PN  TY IL++ L     V  A 
Sbjct: 573 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632

Query: 121 KLLVEMGNKG 130
           ++L E+ +KG
Sbjct: 633 EMLTELCSKG 642


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 288/543 (53%), Gaps = 7/543 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   Q++   M + GV+     +  +IN + ++   ++AL +F  +      P ++ +N
Sbjct: 253 EVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FN 311

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ILD+      +S    +   ++  G++P++FT NIL+   C   ++   + +L ++  +
Sbjct: 312 KILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKR 371

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P  V+  T++  +C  GQV++A     + LA  F      Y  LING+CK      A
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL ++  R   PNV  YSTII +LC    V  + G+  +M V+G + ++ ++++L+ G
Sbjct: 432 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 491

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           + + G+  EA  L N M+ +   P+V  Y+ L+  L   G + EA SV   M +    P+
Sbjct: 492 FCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPD 551

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY+ L++G+     +  A  ++N M   G +P+V  YT ++   C++ M  +A +L +
Sbjct: 552 VFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFK 611

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +N  P+TVT+++ + GLC  GR+ +   L+D+M+      ++ TYN L+DGL +  
Sbjct: 612 EMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNG 671

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            + +A  L  +++  GI+ N  T+  +L G+C+ G + +A ++   +L +G  LD   +N
Sbjct: 672 HLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYN 731

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           ++IY +CKQG +  A+ +L ++   G   P+ +++  ++  +       +A   L++M+ 
Sbjct: 732 VMIYGHCKQGLLEEALTMLSKMEENG-CIPNAVTFDIIINALFKKDENDKAEKLLRQMIA 790

Query: 545 EGI 547
            G+
Sbjct: 791 RGL 793



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/635 (25%), Positives = 293/635 (46%), Gaps = 75/635 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++    +   ++  +G   ++  + ++IN   R+G    A+K   +I    
Sbjct: 69  LIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRL 128

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V++YN I+DAL      S    ++S M   G+  NV TY+ L+   C   ++  A 
Sbjct: 129 AKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEAL 188

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---------------------- 158
            LL  M  K   P+  +Y  +V ++CK G+V+EA+ +                       
Sbjct: 189 GLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGY 248

Query: 159 ------------------MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD------- 193
                             M     V  YN +ING CK  ++++A  L  EM+        
Sbjct: 249 FLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPII 308

Query: 194 ---------------------------RGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
                                      +GI P++ T + +I+  C +G +     +L ++
Sbjct: 309 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKI 368

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG  P+  +  +L+KG  L G+  +A    ++++ +GF  N V+Y+TLI+G+C  G  
Sbjct: 369 LKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 428

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
             A+ +  +++     PNV  YS +ID   K   +  A  +++ M   G S +VV Y+ +
Sbjct: 429 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 488

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C      +A  L+ +M  +   P+  T+   +  L   G+V  A  +L  M +   
Sbjct: 489 IYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACV 548

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P++ TYN L++G L V  VK+A  +   +   G+  ++ TY  +++G C++ MV EA  
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALN 608

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M  +    D +T++ ++   CK G+++    L+D +R  G+   D+I+Y SL+ G+
Sbjct: 609 LFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ-PADVITYNSLIDGL 667

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +G + +A     KM ++GI PN  T+ +L+  L
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/535 (27%), Positives = 267/535 (49%), Gaps = 23/535 (4%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
            + V +SV+    + G     + +   I+   LK  VK   H  D LLA+          
Sbjct: 43  DDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQ---------- 92

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
                 G + N  +Y  L+  +C+      A K L ++  +   P+   Y TI+ ++CK 
Sbjct: 93  ------GFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKY 146

Query: 149 GQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
             V EA     E+ ++   + V  Y+ LI G C   K++EA  LL  MV + I+PNV TY
Sbjct: 147 QLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTY 206

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + ++ +LC  G V+ +  +L  M       N+ ++++L+ GY L     +A  ++N M  
Sbjct: 207 NILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSL 266

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G  P+V +Y+ +I+G C    +D+A+++  +M  +  PP +  ++ ++D FAK  +   
Sbjct: 267 MGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYST 325

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  + +R+   G  P++     ++   C         S++ K+     PP+TVT NT IK
Sbjct: 326 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIK 385

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G+V  A+   D++       N  +Y  L++G+ ++   + A +L+ +I+    + 
Sbjct: 386 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKP 445

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+  Y+TI+  +C+  +V EA+ L  +M ++G   D +T++ +IY +C  GK+  AI LL
Sbjct: 446 NVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLL 505

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + +      NPD+ +YT L+  +   G ++EA   L  ML   + P+  T+N L+
Sbjct: 506 NEMV-LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 235/487 (48%), Gaps = 42/487 (8%)

Query: 116 VDGAYKL--LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVY 168
           VD A  L  L ++  +G  PD V+  T++  +C  GQV+EA     + LA  F      Y
Sbjct: 42  VDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSY 101

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
             LING+C+      A   L ++  R   PNV  Y+TII +LC    V  + G+  +M V
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTV 161

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +G + N+ ++++L+ G+ + G+  EA  L N M+ +   PNV  Y+ L+  LC  G + E
Sbjct: 162 KGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKE 221

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A SV   M +     NV TYS L+DG+     +  A  ++N M   G +P+V +Y  M+ 
Sbjct: 222 AKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMIN 281

Query: 349 VLCQNNMFHQAHSLIEKMAFENCP----------------------------------PN 374
             C+     +A +L ++M     P                                  P+
Sbjct: 282 GFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPD 341

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T N  I   C  G++ +   +L ++ +    P+  T N L+ GL    +VK+A     
Sbjct: 342 LFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHD 401

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++   G QLN V+Y T+++GVC+ G    A +LL K+    TK +   ++ II A CK  
Sbjct: 402 KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQ 461

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            V+ A  L   +   G  + D+++Y++L++G C  G ++EA   L +M+ + I P+  T+
Sbjct: 462 LVSEAYGLFSEMTVKG-ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520

Query: 555 NVLVRSL 561
            +LV +L
Sbjct: 521 TILVDAL 527



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 131/272 (48%), Gaps = 5/272 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ LG++ ++   + +L  M    V      + +++N Y  V   ++A  +F  +   G
Sbjct: 523 LVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG 582

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  +++             ++  M +  M P+  TY+ L+  LCK+ R+   +
Sbjct: 583 VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVW 642

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
            L+ EM ++G   D ++Y +++  +CK G +++A  L  +    G+      +  L++GL
Sbjct: 643 DLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGL 702

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A  +  +++ +G   +V  Y+ +I   C  G +E +L +L +M   GC PN 
Sbjct: 703 CKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNA 762

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +F  ++          +A  L  +MI  G L
Sbjct: 763 VTFDIIINALFKKDENDKAEKLLRQMIARGLL 794


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 163/562 (29%), Positives = 284/562 (50%), Gaps = 12/562 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D    + ++MK +GV  S     ++I  Y ++   E+A  ++  +   G+ P V   +
Sbjct: 239 DADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLS 298

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L  + RFS    ++  M + G+ PN  TY   + +L K  RV+ +  LL EM ++
Sbjct: 299 ALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSR 358

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G A D V YTT++  + K G++EEA++     L+         Y  L++  C+   I+ A
Sbjct: 359 GVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGA 418

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M ++ + PNV+T+S+I++ L   G +  + G + +M   G  PN+ ++ +L+ G
Sbjct: 419 EQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDG 478

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +        A D++  M+ EG   N     +L++GL  NG+++EA ++   M E     +
Sbjct: 479 FFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLD 538

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+ L+DG  K GN+  A ++   ++    SP+ V Y   +  LC+   F +A S ++
Sbjct: 539 HVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLK 598

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+  T+NT I   C  G    A+KLL++MK     PN+ TY  L+ GLL   
Sbjct: 599 EMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAG 658

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILH---GVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
            V++A  L+ E+   G     +TY  +L    G     +++E  +L   M+  G   D  
Sbjct: 659 VVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHEL---MMGAGLHADIT 715

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +N +++  C  G    A  +LD + G G   PD I++ +L+ G C S  +  AF    +
Sbjct: 716 VYNTLVHVLCCHGMTRKATIVLDEMLGRG-IAPDTITFNALILGHCKSSHLDNAFATYAQ 774

Query: 542 MLNEGICPNFATWNVLVRSLFS 563
           ML++G+ PN AT+N L+  L S
Sbjct: 775 MLHQGLSPNIATFNTLLGGLES 796



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 255/516 (49%), Gaps = 15/516 (2%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N ++D        +    +   M   G+  +V  YN L+     +   D A+++   M 
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIE 182
             G  P  V++TT++   CK+ ++EEA  L    +R G    V   +AL++GLC++ +  
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA+ L  EM   G+ PN +TY T I SL  V  V  SLG+LG+M  RG   ++  +T+++
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                 G+  EA D+    + +   PN V Y+ L+   C  G++D A  +  QMEE S  
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PNV T+S++++G  K G +  A+    +M  +G +PNVV Y  ++    +      A  +
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
              M  E    N    ++ + GL   G ++ A  L   M +   L +   Y  L+DGL +
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              +  A ++  E+ +  +  + V YN  ++ +CR G   EA   L +M   G + D  T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN---PDIISYTSLLWGICNSGGMQEAFIYL 539
           +N +I A C++G  + A++LL+ ++    W+   P++I+YT+L+ G+  +G +++A   L
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMK----WSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
            +M + G  P   T+    R L +  G   P  IL+
Sbjct: 668 NEMASAGFTPTPLTYR---RVLQACSGSRSPYVILE 700



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 154/625 (24%), Positives = 279/625 (44%), Gaps = 77/625 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M   GV+ +   + + I+S  +V    ++L +   +   G+   + +Y  ++D L 
Sbjct: 316 LFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLG 375

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      +  +   D + PN  TY +L+ A C+   +DGA ++L++M  K  +P+ V
Sbjct: 376 KEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVV 435

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----------------------------- 166
           ++++I++ + K G + +A     +   SG++                             
Sbjct: 436 TFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDM 495

Query: 167 ----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                     + ++L+NGL K   IEEA  L  +M +RG+  + + Y+T++  L   GN+
Sbjct: 496 LHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNM 555

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +L +  ++  R  +P+   +   +      G+  EA      M   G  P+   Y+T+
Sbjct: 556 PAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTM 615

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I   C  G+  +A+ +  +M+ +S  PN+ TY+ L+ G  +AG +  A  + N M S G 
Sbjct: 616 ISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGF 675

Query: 337 SP-----------------------------------NVVAYTCMVKVLCQNNMFHQAHS 361
           +P                                   ++  Y  +V VLC + M  +A  
Sbjct: 676 TPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATI 735

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++++M      P+T+TFN  I G C    +D A     QM      PNI T+N LL GL 
Sbjct: 736 VLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLE 795

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
              R+ EA  ++ E++K G++ N +TY+ ++ G  +    VEA +L  +M+ +G    A 
Sbjct: 796 SAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 855

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N +I  + K G +N A +L   ++  G  +    +Y  LL G        E  I L+ 
Sbjct: 856 TYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTS-STYDILLNGWSKLRNGTEVRILLKD 914

Query: 542 MLNEGICPNFATWNVLVRSLFSNLG 566
           M   G  P+  T + + R+ FS  G
Sbjct: 915 MKELGFKPSKGTISSMSRA-FSKPG 938



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 233/480 (48%), Gaps = 16/480 (3%)

Query: 95  GMEPNV----FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           G +P V     +YNI L  L +      A  +L EM  +G   D V+ +T +  + + G 
Sbjct: 108 GPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGL 167

Query: 151 VEEARELAMRF-------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           V EA  LA          G GV  +NALI+G CK   +  A  ++  M  +G+  +V+ Y
Sbjct: 168 VGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGY 227

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +T+++     G+ + +  +  +M   G  P++ + T+L+  Y    R  EA  L+  M+R
Sbjct: 228 NTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVR 287

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G LP+VV  S L+ GLC +G   EA ++  +M++    PN  TY   ID  AK   +  
Sbjct: 288 SGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNE 347

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           +  +   M+S G + ++V YT ++  L +     +A  ++     +N  PN VT+   + 
Sbjct: 348 SLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVD 407

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
             C  G +D A ++L QM++    PN+ T++ +L+GL++   + +A   + +++  GI  
Sbjct: 408 AHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAP 467

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+VTY T++ G  +      A  +   ML EG + +    + ++    K G +  A  L 
Sbjct: 468 NVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALF 527

Query: 504 DRIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +   GE     D ++Y +L+ G+  +G M  A    Q+++   + P+   +NV +  L
Sbjct: 528 KDM---GERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCL 584



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 244/536 (45%), Gaps = 40/536 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           IDG + +L QM+ + VS +   F S++N   + G   +A     ++++ G+ P V  Y  
Sbjct: 415 IDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGT 474

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D             +Y +M  +G+E N F  + L+  L KN  ++ A  L  +MG +G
Sbjct: 475 LIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
              D V+Y T++  + K G +  A    +EL  R       VYN  IN LC+  K  EA 
Sbjct: 535 LLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAK 594

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L EM + G++P+  TY+T+IS+ C  GN   +L +L +M      PN+ ++T+L+ G 
Sbjct: 595 SFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGL 654

Query: 246 LLGGRTHEASDLWNRMIREGFLP-----------------------------------NV 270
           L  G   +A  L N M   GF P                                   ++
Sbjct: 655 LEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADI 714

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+TL+H LC +G   +A  V  +M      P+  T++ALI G  K+ +L  A   + +
Sbjct: 715 TVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQ 774

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+  G SPN+  +  ++  L       +A ++I +M      PN +T++  + G      
Sbjct: 775 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSN 834

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              A++L  +M     +P  +TYN L+    +   + +A EL +E+++ G+     TY+ 
Sbjct: 835 KVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 894

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +L+G  +     E   LL  M   G K    T + +  A+ K G    A +LL  +
Sbjct: 895 LLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 30/247 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M   G++     F ++I  + +    + A   + ++   GL P +  +N +L  L 
Sbjct: 736 VLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLE 795

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R    + +   MK+ G+EPN  TY+IL+    K +    A +L  EM +KG  P A 
Sbjct: 796 SAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKA- 854

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
                                        S YN+LI+   K   + +A  L  EM  RG+
Sbjct: 855 -----------------------------STYNSLISDFAKAGMMNQAKELFSEMKRRGV 885

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
                TY  +++    + N      +L  M   G  P+  + +S+ + +   G T EA  
Sbjct: 886 LHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARR 945

Query: 257 LWNRMIR 263
           L   + +
Sbjct: 946 LLKTLFK 952



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/270 (21%), Positives = 104/270 (38%), Gaps = 49/270 (18%)

Query: 299 NSCPPNVTTYSA----LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            + PP  T  ++    L   F +AG L  AS + + + +    P       ++  L  + 
Sbjct: 9   QALPPAPTLQASFLCSLALAFLRAGRLSAASHVVSSLPA---PPPARLLRRLIPALASSG 65

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK--QYECLPNITT 412
           +   A        F   P + +T N+ I   C    +  A+ LL      Q +   +  +
Sbjct: 66  LVAAASR------FRPVPGDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAADTVS 119

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN  L GL      + A  +++E+ K G+  + VT +T L G+ R G+V EA   L +ML
Sbjct: 120 YNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEA-AALAEML 178

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           + G  +D +                                  ++ + +L+ G C    M
Sbjct: 179 VRGRGIDGL---------------------------------GVVGWNALIDGYCKVQDM 205

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             A   +++M  +G+  +   +N LV   F
Sbjct: 206 AAALAVVERMTTQGLSLDVVGYNTLVAGFF 235


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 267/524 (50%), Gaps = 6/524 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           V   + AL +F R+      P++  ++ +L ++     +S +  +Y  M   G+  N +T
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-- 160
            NIL+ + C  NR+  A+ +L ++   G  P   ++TT++  +C  G++ EA +L  +  
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 161 ---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
              F   V  Y  LINGLCK      A   L  M  R   P V+ YSTII SLC    + 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +   M  +G +PN  +++SL+ G  + G   EA  L+  MI    +P+ + ++TL+
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC  G + +A  V   M ++   P+V TY++L+DG      +     +++ M+  GC 
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+V++YT ++   C+  +  +A  L E+M+ +   P+TVT+NT I GLC  GR+  A+ L
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 391

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M  Y  +P++ TY  L D L + +R+ EA  L+  IE   +  +I  Y+ ++ G+CR
Sbjct: 392 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 451

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           AG +  A  L  K+  +G   D  T+ I+I   C+QG +  A +L   +   G  +P+  
Sbjct: 452 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG-CSPNAC 510

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Y  +  G   +     A    Q+ML+ G   + +T  +LV  L
Sbjct: 511 TYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEML 554



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 245/492 (49%), Gaps = 5/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM   G+  +      +INS+  +     A  +   I + G +P+   +  ++  L 
Sbjct: 76  LYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLC 135

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G +P+V TY  L+  LCK      A + L  M  + C P  V
Sbjct: 136 VEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVV 195

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y+TI+ S+CK  Q+ EA  L +     G+S     Y++LI+GLC     +EA  L   M
Sbjct: 196 VYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 255

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R I P+ +T++T++ +LC  G V  +  ++  M      P++ ++ SL+ G+ L    
Sbjct: 256 IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM 315

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +  ++++ M+R+G +P+V++Y+TLI+G C    MD+A+ +  +M +    P+  TY+ L
Sbjct: 316 GKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTL 375

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G    G L  A  +++ M+  G  P++V Y  +   LC+N+   +A  L++ +   N 
Sbjct: 376 IHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   ++  + G+C  G ++ A  L  ++      P++ TY  +++GL +   + EA +
Sbjct: 436 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 495

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+++ G   N  TYN I  G  R    + A QL  +ML  G  +D  T  +++    
Sbjct: 496 LFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLS 555

Query: 492 KQGKVNNAIQLL 503
             G   +  Q+L
Sbjct: 556 DDGLDQSVKQIL 567



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 257/508 (50%), Gaps = 7/508 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  R+      L ++ ++  FG+       N ++++    NR      +  ++ 
Sbjct: 57  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 116

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+  T+  L++ LC   ++  A +L  +M  +G  PD ++Y T+++ +CK+G   
Sbjct: 117 KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTS 176

Query: 153 EA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A    R +  R     V VY+ +I+ LCK+ ++ EA  L  +M+ +GI PN  TYS++I
Sbjct: 177 TAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLI 236

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC +G+ + ++ +   M  R   P+  +F +L+      G   +A  + + MI+    
Sbjct: 237 HGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLK 296

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+VV Y++L+ G C    M + V+V   M    C P+V +Y+ LI+G+ K   +  A  +
Sbjct: 297 PDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGL 356

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M   G  P+ V Y  ++  LC       A +L  +M      P+ VT+      LC 
Sbjct: 357 FEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK 416

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R+  AM LL  ++     P+I  Y+ ++DG+ R   ++ A +L +++   G+  ++ T
Sbjct: 417 NHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRT 476

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  +++G+C+ G++ EA +L G+M   G   +A T+N+I   + +  +   AIQL   + 
Sbjct: 477 YTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEML 536

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEA 535
             G ++ D +S T+LL  + +  G+ ++
Sbjct: 537 SRG-FSID-VSTTTLLVEMLSDDGLDQS 562



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 182/360 (50%), Gaps = 5/360 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++     L   M  +G+S +   + S+I+    +G  ++A+++FY +    
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    +N ++DAL  E      + +   M +  ++P+V TYN L+   C  + +    
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTV 319

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +   M  KGC P  +SYTT+++  CK+  +++A  L               YN LI+GL
Sbjct: 320 NVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGL 379

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ +A  L  EMV  G  P+++TY  +   LC    +  ++ +L  +     +P+I
Sbjct: 380 CHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDI 439

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           H ++ ++ G    G    A DL++++  +G  P+V  Y+ +I+GLC  G + EA  +  +
Sbjct: 440 HIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+EN C PN  TY+ +  GF +    L A Q++  M+S G S +V   T +V++L  + +
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGL 559



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 1/141 (0%)

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           L VN + +A  L   + +     +IV ++ +L  + R         L  +M   G   + 
Sbjct: 30  LNVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNT 89

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T NI+I ++C   ++  A  +L  I   G + P   ++T+L+ G+C  G + EA     
Sbjct: 90  YTLNILINSFCHLNRLGFAFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEALQLFD 148

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           KM  EG  P+  T+  L+  L
Sbjct: 149 KMTGEGFQPDVLTYGTLINGL 169



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 2/141 (1%)

Query: 23  VEGVSCSEGVFIS--VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           +EG +    + I   V++   R G  E A  +F ++   GL P V+ Y  +++ L  +  
Sbjct: 430 IEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 489

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
            +  + ++  M  +G  PN  TYN++ +   +NN    A +L  EM ++G + D  + T 
Sbjct: 490 LAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTL 549

Query: 141 IVSSICKLGQVEEARELAMRF 161
           +V  +   G  +  +++   F
Sbjct: 550 LVEMLSDDGLDQSVKQILCEF 570


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 276/517 (53%), Gaps = 6/517 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  FYR+     +P+V  +   L ++  + ++S    + + M   G+  NV++ N+L
Sbjct: 78  DDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           +  LC+ + VD A  ++ +M   G  PDA+++ T+++ +C  G+++EA  L         
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN +INGLCK      A  +  +M      PNV+TY+TII SLC    V  ++ 
Sbjct: 198 EPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVE 257

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
            L +M  RG  P++ ++ ++L G+   G+ +EA+ L+  M+    +P+ V ++ L+ GLC
Sbjct: 258 FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLC 317

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  VS  M E    PN  TY+AL+DG+     +  A ++   MI  GC+PN+ 
Sbjct: 318 KEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLS 377

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   C++   ++A  L+ +M+ +N  P+TVT++T ++GLC  GR   A+ L  +M
Sbjct: 378 SYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEM 437

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                LP++  Y+ LLDG  +   + EA +L+ E+ +  I+ NI+ Y  ++ G+  AG +
Sbjct: 438 CSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKL 497

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A +L  K+  +G + D  T+N++I    K+G  + A +   ++   G + PD  SY  
Sbjct: 498 EVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG-FLPDSCSYNV 556

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++ G   +     A   + +M+ +    + +T+ +L+
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 241/452 (53%), Gaps = 6/452 (1%)

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVY--NA 170
           +D A      M      P  V +   + SI K  Q   A  L  +   FG   +VY  N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LIN LC+   ++ A  ++ +M   GI P+ IT++T+I+ LC+ G ++ ++G+  +M   G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             PN+ S+ +++ G    G T  A  ++ +M +    PNVV Y+T+I  LC +  ++EAV
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
               +M +   PP+V TY+ ++ GF   G L  A++++  M+     P+ V +  +V  L
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+  M  +A  + E M  +   PN  T+N  + G C   ++D A+K+L  M    C PN+
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           ++YN L++G  +  R+ EA  L++E+ +  +  + VTY+T++ G+C+ G   EA  L  +
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G   D + ++I++  +CK G ++ A++LL  +       P+II YT L+ G+  +G
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH-ERRIKPNIILYTILIRGMFIAG 495

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++ A     K+  +GI P+  T+NV+++ L 
Sbjct: 496 KLEVAKELFSKLSADGIRPDIWTYNVMIKGLL 527



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 246/488 (50%), Gaps = 5/488 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           + +K +      L  QM + GV+ +      +IN   R+   + A+ +  ++ + G++P 
Sbjct: 106 IAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPD 165

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              +N +++ L  E +      +++ M   G EPNV +YN ++  LCKN     A ++  
Sbjct: 166 AITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFR 225

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEH 179
           +M      P+ V+Y TI+ S+CK   V EA E             V  YN +++G C   
Sbjct: 226 KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLG 285

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++ EA  L  EMV R + P+ +T++ ++  LC  G V  +  +   M  +G  PN +++ 
Sbjct: 286 QLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYN 345

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+ GY L  +  EA  +   MI +G  PN+ +Y+ LI+G C +  M+EA  +  +M E 
Sbjct: 346 ALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +  P+  TYS L+ G  + G    A  ++  M S+G  P+++AY+ ++   C++    +A
Sbjct: 406 NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEA 465

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L+++M      PN + +   I+G+   G+++ A +L  ++      P+I TYN ++ G
Sbjct: 466 LKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKG 525

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           LL+     EA+E   ++E  G   +  +YN I+ G  +      A QL+ +M+ +    D
Sbjct: 526 LLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585

Query: 480 AITFNIII 487
           + TF +++
Sbjct: 586 SSTFQMLL 593



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 176/347 (50%), Gaps = 1/347 (0%)

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           +++ +L    +M      P++  F   L       +   A  L N+M   G   NV + +
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI+ LC    +D AVSV  +M +    P+  T++ LI+G    G +  A  ++N M+ +
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PNV++Y  ++  LC+N     A  +  KM      PN VT+NT I  LC    V+ A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           ++ L +M      P++ TYN +L G   + ++ EA  L  E+    +  + VT+N ++ G
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ GMV EA  +   M  +G + +A T+N ++  YC   +++ AI++L  + G G   P
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG-CAP 374

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ SY  L+ G C S  M EA   L +M  + + P+  T++ L++ L
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGL 421


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/526 (29%), Positives = 262/526 (49%), Gaps = 6/526 (1%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           + Y      + AL  F R+      P++  +  IL ++    R+S +  +   M   G+ 
Sbjct: 47  SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            NV+T N+L+ + C  NRV+ A+ +L ++   GC PD  S+TT++  +C  GQ+ EA  L
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 158 AMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             +     F   V +Y  LINGLCK      A  LL  M      P+V+ Y T+I SLC 
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
                 +  +  +M  +G +PNI +  SL+      G     + L N M+    +PN ++
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            +T++  LC  G + +A  V   M ++   P+V TY+ALIDG      +  A ++++ M+
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC+PNV +Y  ++   C+     +A  L E+M  +   PNTVT+NT I GLC  GR+ 
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+ L  +M     +P++ TY  LLD L +   + +A  L+  IE   +  +I  Y  ++
Sbjct: 407 DAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVI 466

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+CRAG + +A  L   +  +G K +  T+NI+ +  CK+G ++ A +L   +      
Sbjct: 467 DGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA-C 525

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + D  +Y ++  G   +     A   L++ML  G   + +T  +LV
Sbjct: 526 SADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLV 571



 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 255/508 (50%), Gaps = 7/508 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  +V      L +  ++  FG+   V   N ++++    NR +    + + + 
Sbjct: 77  FAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKIL 136

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+  ++  L+K LC   ++  A  L  +M  +G  PD V Y T+++ +CK G   
Sbjct: 137 KLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS 196

Query: 153 EARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  L      G     V VY  LI+ LCK+ +  +AF L  EM+ +GI PN++T ++++
Sbjct: 197 AAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV 256

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +LC++G  +    +L +M      PN  S T+++      G   +A D+ + M + G  
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+VV Y+ LI G C    MDEAV V   M    C PNV +Y+ LI+G+ K   +  A  +
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      PN V Y  ++  LC       A +L  +M      P+ VT+   +  LC 
Sbjct: 377 FEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCK 436

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
              +D AM LL  ++     P+I  Y  ++DG+ R   +++A +L + +   G++ N+ T
Sbjct: 437 NCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWT 496

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN + HG+C+ G++ EA +L  +M       D  T+N I   + +  + + AIQLL+ + 
Sbjct: 497 YNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEA 535
             G ++ D +S T+LL G+ +  G+ ++
Sbjct: 557 ARG-FSCD-VSTTTLLVGMLSDDGLDQS 582



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 222/494 (44%), Gaps = 69/494 (13%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R L M     +  +  ++  + K  +      L  +M   GI  NV T + +I+S C + 
Sbjct: 64  RMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLN 123

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            V  +  +L ++   GC P+  SFT+L+KG  L G+  EA  L+++MI EGF P+VV Y+
Sbjct: 124 RVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYA 183

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI+GLC  G    A+ +   ME+ +C P+V  Y  LI    K      A  +++ MI+ 
Sbjct: 184 TLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK 243

Query: 335 GCSPNVV-----------------------------------AYTCMVKVLCQNNMFHQA 359
           G SPN+V                                   + T +V  LC+  M  QA
Sbjct: 244 GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQA 303

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           H +++ M      P+ VT+   I G C    +D A+K+ D M    C PN+ +YN L++G
Sbjct: 304 HDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             ++ R+ +A  L  E+ +  +  N VTYNT++HG+C  G + +A  L  +M+  G   D
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRG-------------------GGEW-------- 512
            +T+ I++   CK   ++ A+ LL  I G                    GE         
Sbjct: 424 LVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFS 483

Query: 513 -------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
                   P++ +Y  +  G+C  G + EA     +M       +  T+N + +    N 
Sbjct: 484 NLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543

Query: 566 GHLGPVYILDDIMA 579
                + +L++++A
Sbjct: 544 ETSRAIQLLEEMLA 557



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 231/482 (47%), Gaps = 33/482 (6%)

Query: 9   CEIDGVQY---LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C ++ V +   +L ++   G       F ++I      G   +AL +F ++   G +P V
Sbjct: 120 CHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDV 179

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
            IY  +++ L      S    +  +M++   +P+V  Y  L+ +LCK+ +   A+ L  E
Sbjct: 180 VIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSE 239

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           M  KG +P+ V+  ++V ++C LG+ +                N L+N            
Sbjct: 240 MITKGISPNIVTCNSLVYALCNLGEWKHV--------------NTLLN------------ 273

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               EMVD  I PN I+ +T++ +LC  G V  +  ++  MF  G  P++ ++T+L+ G+
Sbjct: 274 ----EMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGH 329

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L     EA  +++ M+ +G  PNV +Y+TLI+G C    MD+A+ +  +M      PN 
Sbjct: 330 CLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNT 389

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LI G    G L  A  ++  M++ G  P++V Y  ++  LC+N    +A +L++ 
Sbjct: 390 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +   N  P+   +   I G+C  G ++ A  L   +      PN+ TYN +  GL +   
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + EA +L  E+++     +  TYNTI  G  R      A QLL +ML  G   D  T  +
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTL 569

Query: 486 II 487
           ++
Sbjct: 570 LV 571



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 221/428 (51%), Gaps = 10/428 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  + +I    +L  +M  EG      ++ ++IN   + G    A+++   + +  
Sbjct: 150 LIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN 209

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V +Y  ++ +L  + + +    ++S M   G+ PN+ T N L+ ALC         
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN 269

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGL 175
            LL EM +    P+A+S TT+V ++CK G V +A ++  M F SGV      Y ALI+G 
Sbjct: 270 TLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGH 329

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +++EA  +   MV +G  PNV +Y+T+I+  C +  ++ ++ +  +M  +   PN 
Sbjct: 330 CLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNT 389

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G    GR  +A  L+  M+  G +P++V Y  L+  LC N  +D+A+++   
Sbjct: 390 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +E ++  P++  Y+ +IDG  +AG L  A  +++ + S G  PNV  Y  M   LC+  +
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNITTY 413
             +A  L  +M    C  +  T+NT  +G         A++LL++M  + + C  + TT 
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTT- 568

Query: 414 NELLDGLL 421
             LL G+L
Sbjct: 569 --LLVGML 574



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 179/352 (50%), Gaps = 6/352 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+S +     S++ +   +G  +    +   + +  + P       ++DAL 
Sbjct: 236 LFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALC 295

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   +  + +   M + G+EP+V TY  L+   C  + +D A K+   M +KGCAP+  
Sbjct: 296 KEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVF 355

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T+++  CK+ ++++A  L       +       YN LI+GLC   ++++A  L  EM
Sbjct: 356 SYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREM 415

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G  P+++TY  ++  LC   +++ ++ +L  +     +P+I  +T ++ G    G  
Sbjct: 416 VACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGEL 475

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A DL++ +  +G  PNV  Y+ + HGLC  G +DEA  +  +M+EN+C  +  TY+ +
Sbjct: 476 EDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTI 535

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH-QAHSL 362
             GF +      A Q+   M++ G S +V   T +V +L  + +   +AH L
Sbjct: 536 TQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKL 587



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 44/262 (16%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           + E+D    +   M  +G  C+  VF   ++IN Y ++   ++A+ +F  +    L P  
Sbjct: 332 RSEMDEAVKVFDMMVHKG--CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNT 389

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             YN ++  L    R      ++  M   G  P++ TY ILL  LCKN  +D A  LL  
Sbjct: 390 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHK 180
           +      PD   YT ++  +C+ G++E+AR+L     S      V  YN + +GLCK   
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 181 IEEA-----------------------------------FWLLCEMVDRGIDPNVITYST 205
           ++EA                                     LL EM+ RG   +V T + 
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTL 569

Query: 206 IISSLCDVGNVETSLGILGQMF 227
           ++  L D G  ++    L  MF
Sbjct: 570 LVGMLSDDGLDQSEAHKLEDMF 591


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/512 (29%), Positives = 270/512 (52%), Gaps = 12/512 (2%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           IR+ GL P     N IL  L      +    ++  M   G   +   YN L+  LCK   
Sbjct: 37  IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLCKARL 95

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNAL 171
           +D A  LL++M ++G  P  + +  ++  +C+ G++  A    R++          Y  L
Sbjct: 96  LDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKL 155

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GL K  ++ +A  +L EMV     P+  T + ++ SLC    V+ +  ++ +M  RG 
Sbjct: 156 VHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215

Query: 232 NPNIHSFTSLLKGYLLGGRTHEA-SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             N  ++++L+ G     R  EA + L   + R GF P++V YST+I GLC  G + +AV
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +    EE SC P   TY++LI G+ +AG++  A ++  +M+ + C+P+V+ YT ++   
Sbjct: 276 DI---FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAF 332

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+      A+ L ++M      P+ VTF + + GLCG GR++ A++LL+++ +  C P I
Sbjct: 333 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 392

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN ++DG  + N+V++A ELV +    G   N VTYN ++ G CRAG   +A Q L +
Sbjct: 393 YTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 452

Query: 471 MLIEG--TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
           +  EG         + II+ A C+ G+ ++A+Q  + +   G + P   ++ ++++ +C 
Sbjct: 453 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRG-YVPAAATFATVVFALCK 511

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +   Q+A   L++M+  G  P   T + +V +
Sbjct: 512 AHQPQQAHELLEEMIKYGHTPGPGTCDAVVSA 543



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 242/484 (50%), Gaps = 12/484 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+   +  L ++A+ +   ++  G+ P   ++N ++  L    R      +Y  M
Sbjct: 82  TYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM 141

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             D   P+  TY  L+  L K  R+  A ++L EM +    PD  + T +V S+C   +V
Sbjct: 142 N-DAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRV 200

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLC-EMVDRGIDPNVITYST 205
           ++AREL          +    Y+AL++GLCK  +++EA  LL  E+  RG  P+++TYST
Sbjct: 201 DDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYST 260

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC  G +  ++ I  +M    C P   ++ SL+ GY   G   EA  L  +M+ + 
Sbjct: 261 VIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V+ Y+TL+   C  G +D+A  +  QM  N   P+V T+++L+DG    G +  A 
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 377

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   +   GC P +  Y C+V   C++N   +A  L+         PNTVT+N  + G 
Sbjct: 378 ELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGC 437

Query: 386 CGCGRVDWAMKLLDQMKQY--ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           C  GR D A++ LDQ+      C  ++  Y  +LD L R  R  +A +   E+ + G   
Sbjct: 438 CRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 497

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
              T+ T++  +C+A    +A +LL +M+  G      T + ++ AYC+ G +  A +L 
Sbjct: 498 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 557

Query: 504 DRIR 507
             +R
Sbjct: 558 SELR 561



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/499 (28%), Positives = 248/499 (49%), Gaps = 13/499 (2%)

Query: 71  ILDALLAENRFSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           +L  L A  +   + P+  +  RD G+ P+    N +L  LC       A  L  +M   
Sbjct: 16  VLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAEL 75

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G A +  +Y  ++  +CK   ++EA  L +   S     G  ++N +I GLC+  ++  A
Sbjct: 76  G-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHA 134

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M D    P+ +TY+ ++  L   G +  ++ +L +M      P+  + T +++ 
Sbjct: 135 LGVYRQMND-AHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQS 193

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY-QMEENSCPP 303
             LG R  +A +L   M+  G   N + YS L+ GLC    +DEAV++   ++      P
Sbjct: 194 LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTP 253

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ TYS +IDG  KAG L  A  I+  M    C+P  + Y  ++   C+     +A  L+
Sbjct: 254 DIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLL 310

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            KM  +NC P+ +T+ T +   C  GR+D A +L  QM   +  P++ T+  L+DGL   
Sbjct: 311 GKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R+++A EL+ EI + G    I TYN ++ G C++  V +A +L+      G   + +T+
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRG-GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           NI++   C+ G+ + A+Q LD++   GG     +  Y  +L  +C  G   +A  + ++M
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490

Query: 543 LNEGICPNFATWNVLVRSL 561
           +  G  P  AT+  +V +L
Sbjct: 491 IQRGYVPAAATFATVVFAL 509



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 217/400 (54%), Gaps = 8/400 (2%)

Query: 161 FGSGVSVYNALINGLCKEHKIEE-AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           + S  S +  ++ GL    K+      LL E+ DRG+ P+ +  +TI++ LCD  +  T+
Sbjct: 6   YPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTA 65

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +  +M   G   N  ++ +L+          EA  L   M   G  P  + ++ +I G
Sbjct: 66  MALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGG 124

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G +  A+ V  QM  ++ PP+  TY+ L+ G +KAG L  A Q+   M+S    P+
Sbjct: 125 LCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPD 183

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK-LL 398
               T +V+ LC  +    A  L+E+M       N +T++  + GLC C R+D A+  LL
Sbjct: 184 NTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLL 243

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++ +    P+I TY+ ++DGL +  R+++A ++  E+  C      +TYN+++ G CRA
Sbjct: 244 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM-SCAP--TAITYNSLIGGYCRA 300

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + EA +LLGKM+ +    D IT+  ++ A+CK G++++A +L  ++    + +PD+++
Sbjct: 301 GDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMV-ANKLSPDVVT 359

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +TSL+ G+C  G M++A   L+++   G  P   T+N +V
Sbjct: 360 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 399



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 188/401 (46%), Gaps = 12/401 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D VQ L + +    V         V+ S       + A ++   +   G+      Y+ +
Sbjct: 167 DAVQVLQEMVSARHVP-DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225

Query: 72  LDALLAENRFS-MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +D L    R    +  +   + R G  P++ TY+ ++  LCK  R+  A  +  EM    
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS--- 282

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
           CAP A++Y +++   C+ G ++EA  L  +         V  Y  L++  CK  ++++A+
Sbjct: 283 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  +MV   + P+V+T+++++  LC  G +E +L +L ++  RGC P I+++  ++ GY
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM--EENSCPP 303
               +  +A +L       GF+PN V Y+ L+ G C  G  D+A+    Q+  E   CP 
Sbjct: 403 CKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 462

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +V  Y+ ++D   + G    A Q +  MI  G  P    +  +V  LC+ +   QAH L+
Sbjct: 463 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELL 522

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
           E+M      P   T +  +   C  G +  A +L  +++ Y
Sbjct: 523 EEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 563



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 130/259 (50%), Gaps = 7/259 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL +M  +  +     + ++++++ ++G  + A ++F ++    L P V  + 
Sbjct: 302 DMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFT 361

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L  E R      +   + R G  P ++TYN ++   CK+N+V  A +L+ +  ++
Sbjct: 362 SLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSR 421

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-------GVSVYNALINGLCKEHKIE 182
           G  P+ V+Y  +V+  C+ G+ ++A +   +  S        V++Y  +++ LC++ + +
Sbjct: 422 GFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTD 481

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A     EM+ RG  P   T++T++ +LC     + +  +L +M   G  P   +  +++
Sbjct: 482 DAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVV 541

Query: 243 KGYLLGGRTHEASDLWNRM 261
             Y   G   +A +L + +
Sbjct: 542 SAYCRAGMIQKADELASEL 560


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 261/478 (54%), Gaps = 37/478 (7%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M R G  PN  T+N L+    K  R     +LL  M  +G  P+ VSY            
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSY------------ 48

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIIS 208
                             N L+ GLCK  +  EA  L+ +M+ RG    P+++TYST++S
Sbjct: 49  ------------------NGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLS 90

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G VE S  +L ++  RG  P+   +T ++       R  EA +L   MIR G  P
Sbjct: 91  GYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP 150

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
            ++ ++TLI G C   +++ A S+   M  +    +V TY+ L+DG  KAG L  A Q+ 
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            RM ++GC+P+VVAY+  V  LC++     AH ++E+M   +  PN VT+NT + GLC  
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270

Query: 389 GRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
           G++D A+++++QM   + C  N+  Y+ ++DGL ++ R +EA  ++  + + G + ++VT
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVT 330

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI- 506
           Y+++++G+C+AG + EA + + +M +EG K +A+T+  +++  C  G++  A ++++ + 
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMS 390

Query: 507 ---RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               GG    P + +Y +L+ G+C +G + +A  + Q+M ++G  P+  +++ +V  L
Sbjct: 391 SGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 148/453 (32%), Positives = 245/453 (54%), Gaps = 13/453 (2%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P    +N +++    + R      +   M   G++PNV +YN LL+ LCK  R   A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 120 YKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALI 172
            +L+ +M ++G    PD V+Y+T++S  CK G+VEE+REL     S        +Y  ++
Sbjct: 65  EELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVM 124

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
             LCK  ++ EA  LL EM+  G  P +IT++T+IS  C   N+E +  +L  M   G  
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVK 184

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++ ++ +L+ G    GR  EA  L  RM   G  P+VVAYS+ ++GLC +G +  A  V
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQV 244

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYTCMVKVLC 351
             QM ++   PNV TY+ ++DG  K+G +  A ++  +M  S+GC  NVV Y+ +V  LC
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A S++E MA   C P+ VT+++ + GLC  G+++ A++ + +M    C PN  
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN-----IVTYNTILHGVCRAGMVVEAFQ 466
           TY  L+ GL    R+ EA  +V E+   G   +     + TYN ++ G+C+AG + +A +
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALK 424

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
              +M  +G   D ++++ I+    + G+   A
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 242/446 (54%), Gaps = 13/446 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F +++N + + G      ++   +   G++P V  YN +L+ L    R+     +  +M
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 92  -KRDGME-PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
             R G   P++ TY+ LL   CK  +V+ + +LL E+ ++G  PDA+ YT +++S+CK  
Sbjct: 72  ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131

Query: 150 QVEEARELA---MRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           ++ EA EL    +R G   ++  +N LI+G C+E  +E A  LL  M   G+  +V+TY+
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYN 191

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T++  LC  G ++ +  +L +M   GC P++ +++S + G    G+   A  +  +M   
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLG 323
              PNVV Y+T++ GLC +G +D A+ +  QM   + C  NV  YS ++DG  K G    
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  +   M   GC P+VV Y+ +V  LC+     +A   + +MA E C PN VT+ + + 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 384 GLCGCGRVDWAMKLLDQMKQY-----ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           GLC CGR+  A +++++M         C P+++TYN L+ GL +  R+ +A +    +  
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEA 464
            G   + V+Y+TI+ G+ R+G  ++A
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 200/376 (53%), Gaps = 5/376 (1%)

Query: 192 VDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +DR G  PN +T++ +++     G       +L  M  RG  PN+ S+  LL+G     R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 251 THEASDLWNRMIREG--FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            HEA +L   MI  G    P++V YSTL+ G C  G ++E+  +  ++      P+   Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++    K+  L  A ++   MI  GC P ++ +  ++   C+      A SL++ MA 
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
                + VT+NT + GLC  GR+  A +LL++MK   C P++  Y+  + GL +  +V  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI-EGTKLDAITFNIII 487
           A +++ ++       N+VTYNTIL G+C++G +  A +++ +M   +G  L+ + ++ ++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              CK G+   A  +++ +   G   PD+++Y+SL+ G+C +G ++EA   +++M  EG 
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAG-CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359

Query: 548 CPNFATWNVLVRSLFS 563
            PN  T+  LV  L S
Sbjct: 360 KPNAVTYCSLVHGLCS 375



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 11/252 (4%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL++MK  G +     + S +    + G    A ++  ++R+    P V  YN ILD
Sbjct: 206 AEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILD 265

Query: 74  ALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
            L    +      +   M   DG   NV  Y+ ++  LCK  R   A  ++  M   GC 
Sbjct: 266 GLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR 325

Query: 133 PDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHKIEEAFWL 187
           PD V+Y+++V+ +CK G++EEA    RE+AM      +V Y +L++GLC   ++ EA  +
Sbjct: 326 PDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERM 385

Query: 188 LCEMVDRGI-----DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           + EM   G       P+V TY+ +I  LC  G ++ +L    +M  +GC+P+  S+++++
Sbjct: 386 VEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIV 445

Query: 243 KGYLLGGRTHEA 254
           +G    GR  +A
Sbjct: 446 EGLARSGRALQA 457


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 177/627 (28%), Positives = 297/627 (47%), Gaps = 87/627 (13%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREF-GLKPTVKIYNHILDALLAENRFSMINPI 87
           SE   + V++++ R  + + AL  F R+  F G  P V+ +N +LDA +   RFS  +  
Sbjct: 83  SESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAF 142

Query: 88  YSNMKRDG----MEPNVFTYNILLKALC-------------------------------- 111
           ++++        + PN+ TYNI+L++LC                                
Sbjct: 143 FASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMS 202

Query: 112 ---KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSG 164
              KNNR+D A  LL EM +    PDAV Y  ++    + G+ E+A     +L    G+ 
Sbjct: 203 GFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGAS 262

Query: 165 --VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             ++ YN +++GLCK    +EA  +   MV     P++ITY T+I  LC   +V+++  +
Sbjct: 263 PNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARV 322

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M   G  P++  + SLLKG+   GR  EA   W+ M   G + NV +Y+ ++ GL  
Sbjct: 323 YSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFD 381

Query: 283 NGSMDEAVSVSYQME-ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
            G +D+A  +   +E ++S  P++ T+S +I G  + G    + QI     ++G   +  
Sbjct: 382 GGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEF 441

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y+ M+  LC++     A  L EK++ ++  PN+  +N  I G C   +   A+++  QM
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            + +C P   TYN L+ GL +  +  EA     E+ + G  L++ TY +++ G+CR   +
Sbjct: 502 AENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKI 561

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR-------------- 507
             A  L  ++L +G + D +  NI+I+  C  GKV+ A QLL  ++              
Sbjct: 562 DGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNT 621

Query: 508 -------------GGGEWN--------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
                            W         PDIISY + + G+C+     E    L +ML  G
Sbjct: 622 LMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASG 681

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYI 573
           I P   TWN+LVR++       GP+ I
Sbjct: 682 IIPTAITWNILVRAVIK----YGPIQI 704



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/496 (30%), Positives = 249/496 (50%), Gaps = 9/496 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFGLKPTVKIY 68
            +D   YLL +M    V      + +++    R G  E+A++++ + +R+ G  P +  Y
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N +LD L     F     ++  M  +  +P++ TY  ++  LC++  VD A ++  EM  
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
            G  PD V Y +++   C  G+V EA      +++     V+ YN ++ GL     +++A
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKA 388

Query: 185 --FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
              W L E  D  + P+++T+ST+I  LC+ G    SL IL +    G   +  S++S++
Sbjct: 389 TDLWELLEK-DDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    GR  +A  L+ ++  + F PN   Y+ LI+G C      +A+ V  QM EN C 
Sbjct: 448 SGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCS 507

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P   TY+ LI G  KA   L AS+    M+  GC  +V  Y  +++ LC++     A +L
Sbjct: 508 PTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALAL 567

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLL 421
             ++  +    + V  N  I GLC  G+VD A +LL +MK+   C PN+ TYN L+DG  
Sbjct: 568 WNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFY 627

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
                 +A  L   I + G+  +I++YNT + G+C      E  QLL +ML  G    AI
Sbjct: 628 ETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAI 687

Query: 482 TFNIIIYAYCKQGKVN 497
           T+NI++ A  K G + 
Sbjct: 688 TWNILVRAVIKYGPIQ 703



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 202/398 (50%), Gaps = 8/398 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L    ++D    +  +M   G+     ++ S++  +   G   +A K +  +   G
Sbjct: 306 MIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG 365

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGA 119
           ++  V  YN +L  L           ++  + K D + P++ T++ ++  LC+    + +
Sbjct: 366 IR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKS 424

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALING 174
            ++L E    G   D  SY++++S +CK G++++A +L  +     F     +YNALING
Sbjct: 425 LQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALING 484

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+  K  +A  +  +M +    P  ITY+T+I  LC       +     +M  +GC  +
Sbjct: 485 FCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLD 544

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           ++++ SL++G     +   A  LWN+++ +G   +VV ++ LIHGLCS G +DEA  +  
Sbjct: 545 VNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLS 604

Query: 295 QMEE-NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           +M+E N+C PNV TY+ L+DGF + G    A+ +W  ++ NG  P++++Y   +K LC  
Sbjct: 605 EMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSC 664

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           N   +   L+ +M      P  +T+N  ++ +   G +
Sbjct: 665 NRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 157/541 (29%), Positives = 284/541 (52%), Gaps = 13/541 (2%)

Query: 29  SEGVFISV------INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS 82
           ++GVF +V      ++S  +    E++  +F  +R+ G+ P V +++  ++A     +  
Sbjct: 272 NKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVE 330

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
               ++ +M++ G+ PNV TYN L+  LCK+  +D A++   +M   G     ++Y+ ++
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 390

Query: 143 SSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           + + KL +  EA       L   F     VYN LI+G CK   + +A  +  +MV +GI+
Sbjct: 391 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 450

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           PN +T ++II   C +G +E +  IL +M  RG + N  +FT+++    +  R   A   
Sbjct: 451 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 510

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              M+     PN    +TL+ GLC  G   +AV + +++ E     N+ T +ALI G  K
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            GN+  A ++  +M+  G   + + Y  ++   C+     +   L  +M  +   P+T T
Sbjct: 571 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  I G+C  G++D A+ L ++ K  + +PN+ TY  ++DG  + ++++E  +L TE+ 
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              ++LN V YNT++   CR G  VEAF+L   M  +G      T++ +I+  C  G++ 
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 750

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A  L+D +R  G   P+++ YT+L+ G C  G M +    LQ+M +  I PN  T+ V+
Sbjct: 751 DAKCLIDEMRKEGLL-PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 809

Query: 558 V 558
           +
Sbjct: 810 I 810



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 161/578 (27%), Positives = 274/578 (47%), Gaps = 48/578 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  E++   ++ + M+ +GVS    +F + IN++ + G  E A+++F+ + + G
Sbjct: 285 LLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG 343

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN+++  L               M +DG+   + TY++L+  L K  + + A 
Sbjct: 344 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 403

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
            +L E   KG  P+ V Y T++   CK+G + +A  L +R G  VS          N++I
Sbjct: 404 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA--LRIR-GDMVSKGINPNSVTLNSII 460

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G CK  ++E+A  +L EM+ RG   N   ++TII  LC     E++L  L +M +R   
Sbjct: 461 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMR 520

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA-------------------- 272
           PN    T+L+ G    G+  +A +LW R++ +GF  N+V                     
Sbjct: 521 PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRL 580

Query: 273 ---------------YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
                          Y+TLI G C  G ++E   +  +M +    P+  TY+ LI G  +
Sbjct: 581 LKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR 640

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G L  A  +WN   S    PNV  Y  M+   C+ +   +   L  ++  +N   N+V 
Sbjct: 641 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 700

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +NT I+  C  G    A KL D M+     P   TY+ L+ G+  + R+++A  L+ E+ 
Sbjct: 701 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 760

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K G+  N+V Y  ++ G C+ G + +   +L +M       + IT+ ++I  Y K G + 
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            A +LL  + G G   PD ++Y  L  G C  G ++E 
Sbjct: 821 TAAKLLHEMVGKG-IVPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/489 (29%), Positives = 254/489 (51%), Gaps = 9/489 (1%)

Query: 100 VFTYNILLKALCKNNRVDG---AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           V   ++L+   C   R  G   A  +   + NKG  P   + T ++SS+ K  ++E++  
Sbjct: 241 VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYW 300

Query: 157 LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           +      GVS    +++  IN  CK  K+E+A  L  +M   G+ PNV+TY+ +I  LC 
Sbjct: 301 VFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCK 360

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            GN++ +     +M   G N  + +++ L+ G +   + +EA+ +    + +GF PN V 
Sbjct: 361 HGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVV 420

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+TLI G C  G++ +A+ +   M      PN  T +++I GF K G +  A  I   M+
Sbjct: 421 YNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEML 480

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S G S N  A+T ++  LC N+ F  A   + +M   N  PN     T + GLC  G+  
Sbjct: 481 SRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHS 540

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  ++ +     N+ T N L+ GL +   ++EA  L+ ++ + G  L+ +TYNT++
Sbjct: 541 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLI 600

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G C+ G V E F+L G+M+ +G + D  T+N++I+  C+ GK++ A+ L +  +   + 
Sbjct: 601 SGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK-SRDL 659

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P++ +Y  ++ G C +  ++E      ++L + +  N   +N L+R+   N G+    +
Sbjct: 660 VPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRN-GNTVEAF 718

Query: 573 ILDDIMANK 581
            L D M +K
Sbjct: 719 KLHDDMRSK 727



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 139/477 (29%), Positives = 233/477 (48%), Gaps = 14/477 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++   +G + +E V+ ++I+ Y ++G    AL++   +   G+ P     N I+    
Sbjct: 405 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 464

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      I   M   G   N   +  ++  LC N+R + A + L EM  +   P+  
Sbjct: 465 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 524

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
             TT+V  +CK G+  +A EL  R     FG+ +   NALI+GLCK   ++EA  LL +M
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++RG   + ITY+T+IS  C  G VE    + G+M  +G  P+  ++  L+ G    G+ 
Sbjct: 585 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 644

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +LWN       +PNV  Y  +I G C    ++E   +  ++   +   N   Y+ L
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 704

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I  + + GN + A ++ + M S G  P    Y+ ++  +C       A  LI++M  E  
Sbjct: 705 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 764

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN V +   I G C  G++D  + +L +M  Y+  PN  TY  ++DG  +   +K A +
Sbjct: 765 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 824

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           L+ E+   GI  + VTYN + +G C+ G + E     GK+L E    D + FN  ++
Sbjct: 825 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEE-----GKLLAE----DGVGFNSPLF 872


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 263/495 (53%), Gaps = 17/495 (3%)

Query: 80  RFSMINPIYSNMKRDGMEPNV--------FTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +F  ++  YSN   +G   +V           N  L+ + +   ++  +K L  M   G 
Sbjct: 74  KFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGN 133

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGLCKEHKIEEAFW 186
            PD +  TT++   C+LG+  +A + L +  GSG    V  YN +I+G CK  +I  A  
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +L  M    + P+V+TY+TI+ SLCD G ++ ++ +L +M  R C P++ ++T L++   
Sbjct: 194 VLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                  A  L + M   G  P+VV Y+ L++G+C  G +DEA+     M  + C PNV 
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T++ ++      G  + A ++   M+  G SP+VV +  ++  LC+  +  +A  ++EKM
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
               C PN++++N  + G C   ++D A++ L++M    C P+I TYN +L  L +  +V
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           ++A E++ ++   G    ++TYNT++ G+ +AG   +A +LL +M  +  K D IT++ +
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +    ++GKV+ AI+        G   P+ +++ S++ G+C S     A  +L  M+N G
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549

Query: 547 ICPNFATWNVLVRSL 561
             PN  ++ +L+  L
Sbjct: 550 CKPNETSYTILIEGL 564



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 244/470 (51%), Gaps = 8/470 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+  K    +   G  P +     ++       +      I   ++  G  P+V 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TYN+++   CK   ++ A  +L  M     +PD V+Y TI+ S+C  G++++A E+  R 
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y  LI   C++  +  A  LL EM DRG  P+V+TY+ +++ +C  G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M   GC PN+ +   +L+     GR  +A  L   M+R+GF P+VV ++ L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+ LC  G +  A+ +  +M ++ C PN  +Y+ L+ GF K   +  A +   RM+S GC
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  M+  LC++     A  ++ +++ + C P  +T+NT I GL   G+   A+K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LLD+M+  +  P+  TY+ L+ GL R  +V EA +   E E+ GI+ N VT+N+I+ G+C
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLC 530

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           ++     A   L  M+  G K +  ++ I+I     +G    A++LL+ +
Sbjct: 531 KSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 232/446 (52%), Gaps = 8/446 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  + R+G   +A K+   +   G  P V  YN ++       +   IN   S + R 
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC---KAGEINNALSVLDRM 198

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + P+V TYN +L++LC + ++  A ++L  M  + C PD ++YT ++ + C+   V  A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258

Query: 155 REL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +L   MR       V  YN L+NG+CKE +++EA   L +M   G  PNVIT++ I+ S
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +C  G    +  +L  M  +G +P++ +F  L+      G    A D+  +M + G  PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            ++Y+ L+HG C    MD A+    +M    C P++ TY+ ++    K G +  A +I N
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           ++ S GCSP ++ Y  ++  L +     +A  L+++M  ++  P+T+T+++ + GL   G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +VD A+K   + ++    PN  T+N ++ GL +  +   A + +  +   G + N  +Y 
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEG 475
            ++ G+   GM  EA +LL ++  +G
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 199/397 (50%), Gaps = 8/397 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+    +L +M    VS     + +++ S    G  +QA+++  R+ +    P V  Y 
Sbjct: 187 EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A   ++       +   M+  G  P+V TYN+L+  +CK  R+D A K L +M + 
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           GC P+ +++  I+ S+C  G+  +A +L        F   V  +N LIN LC++  +  A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M   G  PN ++Y+ ++   C    ++ ++  L +M  RGC P+I ++ ++L  
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A ++ N++  +G  P ++ Y+T+I GL   G   +A+ +  +M      P+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TYS+L+ G ++ G +  A + ++     G  PN V +  ++  LC++    +A   + 
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            M    C PN  ++   I+GL   G    A++LL+++
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 181/361 (50%), Gaps = 33/361 (9%)

Query: 9   CEIDGVQY---LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C   GV +   LL +M+  G +     +  ++N   + G  ++A+K    +   G +P V
Sbjct: 250 CRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             +N IL ++ +  R+     + ++M R G  P+V T+NIL+  LC+   +  A  +L +
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           M   GC P+++SY                              N L++G CKE K++ A 
Sbjct: 370 MPQHGCQPNSLSY------------------------------NPLLHGFCKEKKMDRAI 399

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L  MV RG  P+++TY+T++++LC  G VE ++ IL Q+  +GC+P + ++ +++ G 
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+T +A  L + M  +   P+ + YS+L+ GL   G +DEA+   ++ E     PN 
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T+++++ G  K+     A      MI+ GC PN  +YT +++ L    M  +A  L+ +
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579

Query: 366 M 366
           +
Sbjct: 580 L 580



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 170/365 (46%), Gaps = 40/365 (10%)

Query: 230 GCNPNIHSFTSLLKGYL-LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           G N     F +L  GY    G  H +S      +   F    V  +  +  +   G ++E
Sbjct: 67  GLNGRAQKFETLSSGYSNSNGNGHYSS------VNSSFALEDVESNNHLRQMVRTGELEE 120

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV- 347
                  M  +   P++   + LI GF + G    A++I   +  +G  P+V+ Y  M+ 
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180

Query: 348 -------------------------------KVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
                                          + LC +    QA  ++++M   +C P+ +
Sbjct: 181 GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+   I+  C    V  AMKLLD+M+   C P++ TYN L++G+ +  R+ EA + + ++
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
              G Q N++T+N IL  +C  G  ++A +LL  ML +G     +TFNI+I   C++G +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLL 360

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             AI +L+++   G   P+ +SY  LL G C    M  A  YL++M++ G  P+  T+N 
Sbjct: 361 GRAIDILEKMPQHG-CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419

Query: 557 LVRSL 561
           ++ +L
Sbjct: 420 MLTAL 424



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 5/264 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL  M  +G S S   F  +IN   R GL  +A+ +  ++ + G +P    YN +L 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLH 387

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +          M   G  P++ TYN +L ALCK+ +V+ A ++L ++ +KGC+P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
             ++Y T++  + K G+  +A +L     A         Y++L+ GL +E K++EA    
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E    GI PN +T+++I+  LC     + ++  L  M  RGC PN  S+T L++G    
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567

Query: 249 GRTHEASDLWNRMIREGFLPNVVA 272
           G   EA +L N +  +G +    A
Sbjct: 568 GMAKEALELLNELCNKGLMKKSSA 591



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 124/232 (53%), Gaps = 4/232 (1%)

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ + +     +    +E M +    P+ +   T I+G C  G+   A K+L+ ++    
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ TYN ++ G  +   +  A  +   +++  +  ++VTYNTIL  +C +G + +A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L +ML      D IT+ I+I A C+   V +A++LLD +R  G   PD+++Y  L+ GI
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG-CTPDVVTYNVLVNGI 284

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           C  G + EA  +L  M + G  PN  T N+++RS+ S    +    +L D++
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 92/164 (56%), Gaps = 4/164 (2%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N  L  ++R   ++E F+ +  +   G   +I+   T++ G CR G   +A ++L  +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G   D IT+N++I  YCK G++NNA+ +LDR+      +PD+++Y ++L  +C+SG ++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLK 221

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +A   L +ML     P+  T+ +L+ +   + G    + +LD++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 78/157 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  +++    +L Q+  +G S     + +VI+   + G   +A+K+   +R   
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y+ ++  L  E +       +   +R G+ PN  T+N ++  LCK+ + D A 
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
             LV M N+GC P+  SYT ++  +   G  +EA EL
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 291/566 (51%), Gaps = 9/566 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+    K E+      L      G       + +++    ++ +    +  +++I   G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P + IYN +++AL  +        I + + + GM+P+ FTY  ++   C+N  +D A+
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
           ++   M  +GC P+A +Y+T+++ +C  G+V EA +      R G    V  + A I  L
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +IE+A+ +  +M  +G  PNV TY+++IS          ++G+  +M   G  PN 
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNT 400

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+   +       A  ++N M + G LPN  +Y+ LI G C+ G  ++A+S+   
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P + TY+ +I G+  +G+   A ++   M +NGC P+  +YT ++   C+ + 
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  +  +M      PN VT+   I G C   ++D A ++L++MK+  C PN+ TYN 
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL + N    A EL   + +  I  ++VTY+T+++G+C  G +  A ++  KM+  G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              +  T++ +I A  ++G+V  A ++   ++  G   PD ++Y  ++     SG +  A
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG-LIPDEVTYVKMIEVCVMSGKVDRA 699

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
           F +L +M+N G  P   T++VL++ L
Sbjct: 700 FDFLGEMINAGCQPTLQTYDVLIKGL 725



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 259/574 (45%), Gaps = 33/574 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            + +M   GV  +   F + I +   +G  E A K+F  +++ G KP V  Y     +L+
Sbjct: 320 FISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYT----SLI 375

Query: 77  AENRFS-MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +  R S M   ++  M RDG+ PN  TYN L+  L +N  +D A  +   MG  GC P+ 
Sbjct: 376 SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNT 435

Query: 136 VSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            SY  ++   C +G  E+A       L  R    +  YN +I G C     + A  +L  
Sbjct: 436 SSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLEL 495

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M   G  P+  +Y+ +IS  C +  +E + G+  +M  RG  PN  ++T+L+ GY    +
Sbjct: 496 MKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEK 555

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A+ +  RM R G  PNV  Y+ LIHGL    +   A  +   M E    P+V TYS 
Sbjct: 556 LDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYST 615

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I+G    G +  A +++N+M+ +GC PN+  Y+ +++ L Q     +A  +  ++  + 
Sbjct: 616 VINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQG 675

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL---------- 420
             P+ VT+   I+     G+VD A   L +M    C P + TY+ L+ GL          
Sbjct: 676 LIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLV 735

Query: 421 -LRVNRVKEAFE-----------LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            L        F+           L +++ +   +L+   Y+ +L  + R+G   EA  L 
Sbjct: 736 ALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLY 795

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M+ +    +  T+   + +  +  KV+ A+ +   +         +  Y  L+  +C 
Sbjct: 796 RSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHM-SDQRCELHLTGYKELICTLCQ 854

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
               +EA    +KML+  +  +   W +L+  L 
Sbjct: 855 LHRRKEARFVFEKMLSRALNADEIVWTILINGLL 888



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 232/482 (48%), Gaps = 27/482 (5%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L E  EID    +   M   G   +   +  +I  Y  +G  E+A+ M   + +    PT
Sbjct: 410 LMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPT 469

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           +  YN I+          +   +   MK +G +P+ ++Y  L+   CK ++++ A  +  
Sbjct: 470 LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFN 529

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVE-EARELAMRFGSG----VSVYNALINGLCKEH 179
           EM ++G  P+ V+YT ++S  CK  +++  AR L     SG    V  YN LI+GL K++
Sbjct: 530 EMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQN 589

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
               A  L   M++  I P+V+TYST+I+ LC+ G +  +L +  +M   GC PN+H+++
Sbjct: 590 NFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYS 649

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL++     GR  EA ++++ + ++G +P+ V Y  +I     +G +D A     +M   
Sbjct: 650 SLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINA 709

Query: 300 SCPPNVTTYSALIDG------FAKAGNLLGAS-------QIWNRMISNGCSPNVVA---- 342
            C P + TY  LI G      + K   L  A+       QI N+ + +  S  +      
Sbjct: 710 GCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFE 769

Query: 343 -----YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
                Y  ++  L ++  + +A++L   M  ++  PN  T+  F+  L    +VD AM +
Sbjct: 770 LSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDV 829

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
              M    C  ++T Y EL+  L +++R KEA  +  ++    +  + + +  +++G+  
Sbjct: 830 FKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLG 889

Query: 458 AG 459
           AG
Sbjct: 890 AG 891



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 180/420 (42%), Gaps = 27/420 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D    +L+ MK  G    E  +  +I+ + ++   E A  MF  + + GL P    Y 
Sbjct: 485 DTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYT 544

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     + +      +   MKR G  PNV TYN+L+  L K N   GA +L   M  +
Sbjct: 545 ALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEE 604

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEA 184
             +PD V+Y+T+++ +C  G +  A E+    ++ G    +  Y++LI  L +E ++EEA
Sbjct: 605 KISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEA 664

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  E+  +G+ P+ +TY  +I      G V+ +   LG+M   GC P + ++  L+KG
Sbjct: 665 EEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVV----------------------AYSTLIHGLCS 282
                  H+   L N      F   ++                       Y  L+  L  
Sbjct: 725 LQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSR 784

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           +G   EA ++   M   S  PN  TY   +    +A  +  A  ++  M    C  ++  
Sbjct: 785 SGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTG 844

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++  LCQ +   +A  + EKM       + + +   I GL G G  D  M+ L  M+
Sbjct: 845 YKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIME 904



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 27/331 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++    G + L + M  E +S     + +VIN     G    AL+MF ++ + G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  Y+ ++ AL  E R      ++S +K+ G+ P+  TY  +++    + +VD A+
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSI------CKLGQVEEARELA---------------- 158
             L EM N GC P   +Y  ++  +       KL  +  A   +                
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS 760

Query: 159 -----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                + F     +Y+AL++ L +  +  EA  L   MV +   PN  TY   + SL   
Sbjct: 761 SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRA 820

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             V+ ++ +   M  + C  ++  +  L+       R  EA  ++ +M+      + + +
Sbjct: 821 LKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVW 880

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           + LI+GL   G  D  +   + ME N   P+
Sbjct: 881 TILINGLLGAGYKDLCMEFLHIMETNRRNPS 911


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 170/639 (26%), Positives = 306/639 (47%), Gaps = 78/639 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++KL    ++     + ++M  +GV  +   +  ++ S      +++A++ F  + + G
Sbjct: 135 LLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKG 194

Query: 61  LKPTVKIYNHILDALLA---ENRFSMI--------------------------------N 85
            KP+  +Y  + + L A   E  FS +                                +
Sbjct: 195 FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS 254

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP-DAVSYTTIVSS 144
            ++  M + G +P+   Y+ ++ A CK   +D A+KL +EM  +  AP + V++T  +S 
Sbjct: 255 KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSG 314

Query: 145 ICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +CK G++E+A    R +     S   VY+ LI  L +  +I++A     E+  R I P+ 
Sbjct: 315 LCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSS 374

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI--HS--------------------- 237
            T  ++I  LC  G V+++L +L  M  RG  P++  HS                     
Sbjct: 375 GTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 434

Query: 238 --------------FTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCS 282
                         + SLL       + H+A  +++ M+ E  F+P+VV+YS LI G C 
Sbjct: 435 MDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCK 494

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              +  A  +  QM + +C PNVTTY+A ++G  + G +  A  ++  M++ GCSP+V+ 
Sbjct: 495 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVIT 554

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y+ ++          QAH L E M    C PN VT+N  + GLC   + D A +L  +M 
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +  C P+  TY  LL G   V ++++A E+  E+   G   ++V YN +L G  RAG   
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 674

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           EA QL   M+    K D ++ NI+I    K  ++++A+++ +R+      +PD+++Y SL
Sbjct: 675 EAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 734

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++G+C    + EA    +++    + P+   +NVL+ ++
Sbjct: 735 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/599 (26%), Positives = 270/599 (45%), Gaps = 51/599 (8%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           SC E V  +VI   R  G   +AL  F  ++    K  V  YN +LD L+          
Sbjct: 95  SCRETVG-AVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQ 150

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++  M   G+ PN FTY +L+++ C     D A +   EM +KG  P +  Y  +   + 
Sbjct: 151 VFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLK 210

Query: 147 KLGQVEE-----ARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
             G+  E      R+L  R    + +  AL+     + K  EA  L   MV  G  P+  
Sbjct: 211 ATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDAT 270

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNP-NIHSFTSLLKGYLLGGRTHEASDLWNR 260
            YS ++ + C + N++ +  +  +M V    P N  ++T+ L G    G+  +A +   R
Sbjct: 271 IYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEAC-R 329

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
            ++E    +   Y  LI  L  +G +D+A     ++   +  P+  T  ++I    KAG 
Sbjct: 330 TMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGR 389

Query: 321 LLGASQIWNRMISNGCSPNVVA-------------------------------------Y 343
           +  A  +   MI  G  P++                                       Y
Sbjct: 390 VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSY 449

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENC-PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
             ++  LC+    HQA ++   M  E    P+ V+++  I G C    +  A KL  QM 
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
              C+PN+TTYN  L+GL+R  R+ +A  +  E+   G   +++TY+T++HG   A    
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A +L   M+  G + +A+T+N +++  CK+ K + A +L  ++   G  +PD ++YT+L
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG-CDPDRVTYTTL 628

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           L+G CN G +++A     +M+++G  P+   +N L++  F   G  G    L  +M ++
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF-RAGKPGEAKQLFQVMVSR 686



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 120/250 (48%), Gaps = 6/250 (2%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L  K  I   Q + ++M   G S     + ++I+ +      +QA ++F  +   G +P 
Sbjct: 527 LMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPN 586

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              YN +L  L  E++    + ++  M   G +P+  TY  LL   C   +++ A ++  
Sbjct: 587 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFD 646

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
           EM +KG  PD V+Y  ++    + G+  EA++L     + +       +N +I+GL K  
Sbjct: 647 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAK 706

Query: 180 KIEEAFWLLCEM-VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
           ++++A  +   M  D G  P+++TY+++I  LC    +  ++ +  ++     +P+ H+F
Sbjct: 707 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 766

Query: 239 TSLLKGYLLG 248
             LL+    G
Sbjct: 767 NVLLEAIKCG 776


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/568 (27%), Positives = 288/568 (50%), Gaps = 11/568 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     +  +D    LL +MK   +     ++   I+ + + G  + A K F+ I+  G
Sbjct: 239 VIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHG 298

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++  L   NR      I+  M+++   P  + YN ++       + D AY
Sbjct: 299 LLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAY 358

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            LL     +GC P  ++Y  I++ + K G++ EA     E+       +S YN LI+ LC
Sbjct: 359 SLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLC 418

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  ++E AF +   M + G+ PNV+T + +I  LC    ++ +  I   M  + C+P+  
Sbjct: 419 KAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEV 478

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F SL+ G    GR  +A  L+ +M+    +PN V Y++LI      G  ++   +  +M
Sbjct: 479 TFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEM 538

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
               C P++   +A +D   KAG       ++  + S G  P+V++Y+ ++  L +    
Sbjct: 539 IHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFA 598

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            + + L   M  + C  +T  +NTFI G C  G+V+ A +LL++MK     P + TY  +
Sbjct: 599 RETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSV 658

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +  G++LN+V Y++++ G  + G + EA+ ++ +++ +G 
Sbjct: 659 IDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGL 718

Query: 477 KLDAITFNIIIYAYCKQGKVNNAI---QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
             +  T+N ++ A  K  ++N A+   Q +  ++G     P+ I+Y+ L+ G+C      
Sbjct: 719 TPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKG----TPNHITYSILINGLCRVRKFN 774

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +AF++ Q+M  +G+ PN  T+  ++  L
Sbjct: 775 KAFVFWQEMQKQGLKPNTITYTTMIAGL 802



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 275/550 (50%), Gaps = 7/550 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+Q M+      +   + ++I +   V  ++  L +F++++E G + +V ++  ++    
Sbjct: 185 LIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFA 244

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   MK + +  ++  YN+ +    K  +VD A+K   E+ + G  PD V
Sbjct: 245 REGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDV 304

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++  +CK  +++EA E+  +     +V     YN +I G     K +EA+ LL   
Sbjct: 305 TYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQ 364

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG  P+VI Y+ I++ L   G +  +L    +M  +   PN+ ++  L+      G  
Sbjct: 365 KARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLSTYNVLIDMLCKAGEV 423

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  + + M   G  PNV+  + +I  LC    +DEA S+   M    C P+  T+ +L
Sbjct: 424 EAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSL 483

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A +++ +M+ +   PN V YT ++K   +       H + ++M    C
Sbjct: 484 IDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGC 543

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    N ++  +   G       L +++K    +P++ +Y+ L+ GL++    +E +E
Sbjct: 544 SPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYE 603

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +++ G  L+   YNT + G C++G V +A+QLL +M  +G +   +T+  +I    
Sbjct: 604 LFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLA 663

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  +++ A  L +  +  G    +++ Y+SL+ G    G + EA++ +++++ +G+ PN 
Sbjct: 664 KIDRLDEAYMLFEEAKSNG-LELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 722

Query: 552 ATWNVLVRSL 561
            TWN L+ +L
Sbjct: 723 YTWNCLLDAL 732



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 263/540 (48%), Gaps = 8/540 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + V+   Q  +   V C+   + ++I  Y   G  ++A  +  R +  G  P+V  YN I
Sbjct: 321 EAVEIFEQMEQNRNVPCAYA-YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCI 379

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  + R       +  MK+D   PN+ TYN+L+  LCK   V+ A+K+   M   G 
Sbjct: 380 LTCLGKKGRLGEALRTFEEMKKDAA-PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGL 438

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFW 186
            P+ ++   ++  +CK  +++EA  +       +       + +LI+GL K+ ++++A+ 
Sbjct: 439 FPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYR 498

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  +M+D    PN + Y+++I S    G  E    I  +M  RGC+P++    + +    
Sbjct: 499 LYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVF 558

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T +   L+  +   GF+P+V++YS LIHGL   G   E   + Y M+E  C  +  
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTH 618

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            Y+  IDGF K+G +  A Q+   M + G  P VV Y  ++  L + +   +A+ L E+ 
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  N V +++ I G    GR+D A  +++++ Q    PN+ T+N LLD L++   +
Sbjct: 679 KSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 738

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA      ++      N +TY+ +++G+CR     +AF    +M  +G K + IT+  +
Sbjct: 739 NEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTM 798

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I    K G +  A  L +R +  G   PD  SY +++ G+  S    EA+   ++   +G
Sbjct: 799 IAGLAKAGNIAEASSLFERFKANGGV-PDSASYNAIIEGLSYSRRAMEAYKIFEETRMKG 857



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/622 (24%), Positives = 277/622 (44%), Gaps = 84/622 (13%)

Query: 36  VINSYRRVGLAEQALKMFY---RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           VI   RR     QA+  F    R  +  L P  + Y+ +L  +    +F     I   M 
Sbjct: 98  VIGVLRRAKDVNQAISYFRWTERKTDQALCP--EAYDSLLLVMAKNVKFDYFEQILGEMS 155

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL---- 148
             G  P+  T   L+ +  K+N++   + L+  M      P   +YTT++ ++  +    
Sbjct: 156 IAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESD 215

Query: 149 -------------------------------GQVEEARELAMRFGSG-----VSVYNALI 172
                                          G+++ A  L     S      + +YN  I
Sbjct: 216 IMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCI 275

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +   K  K++ A+    E+   G+ P+ +TY+++I  LC    ++ ++ I  QM      
Sbjct: 276 DCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNV 335

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P  +++ +++ GY   G+  EA  L  R    G +P+V+AY+ ++  L   G + EA+  
Sbjct: 336 PCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRT 395

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M++++  PN++TY+ LID   KAG +  A ++ + M   G  PNV+    M+  LC+
Sbjct: 396 FEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCK 454

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A S+ E M  + C P+ VTF + I GL   GRVD A +L +QM   + +PN   
Sbjct: 455 AKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVV 514

Query: 413 YNELLDGLLRVNRVKEAFE-----------------------------------LVTEIE 437
           Y  L+    +  R ++  +                                   L  EI+
Sbjct: 515 YTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK 574

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             G   ++++Y+ ++HG+ +AG   E ++L   M  +G  LD   +N  I  +CK GKVN
Sbjct: 575 SRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVN 634

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A QLL+ ++  G   P +++Y S++ G+     + EA++  ++  + G+  N   ++ L
Sbjct: 635 KAYQLLEEMKTKGR-QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSL 693

Query: 558 VRSLFSNLGHLGPVY-ILDDIM 578
           +   F  +G +   Y I++++M
Sbjct: 694 IDG-FGKVGRIDEAYLIMEELM 714



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 229/522 (43%), Gaps = 41/522 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G   + D    LL++ K  G   S   +  ++    + G   +AL+ F  +++  
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-D 402

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN ++D L           +   MK  G+ PNV T NI++  LCK  ++D A 
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            +   M +K C+PD V++ +++  + K G+V++A  L  +           VY +LI   
Sbjct: 463 SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSF 522

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPN-----------------------------------V 200
            K  + E+   +  EM+ RG  P+                                   V
Sbjct: 523 FKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDV 582

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++YS +I  L   G    +  +   M  +GC  + H++ + + G+   G+ ++A  L   
Sbjct: 583 MSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE 642

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P VV Y ++I GL     +DEA  +  + + N    NV  YS+LIDGF K G 
Sbjct: 643 MKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGR 702

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  I   ++  G +PNV  + C++  L +    ++A    + M      PN +T++ 
Sbjct: 703 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSI 762

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLC   + + A     +M++    PN  TY  ++ GL +   + EA  L    +  G
Sbjct: 763 LINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              +  +YN I+ G+  +   +EA+++  +  ++G  +   T
Sbjct: 823 GVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKT 864



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 227/513 (44%), Gaps = 42/513 (8%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG+K  +       ++MK +    +   +  +I+   + G  E A K+   ++E GL P 
Sbjct: 383 LGKKGRLGEALRTFEEMKKDAAP-NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPN 441

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V   N ++D L    +      I+  M      P+  T+  L+  L K  RVD AY+L  
Sbjct: 442 VMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYE 501

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR----------------FGSG 164
           +M +    P+AV YT+++ S  K G+ E+     +E+  R                F +G
Sbjct: 502 QMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAG 561

Query: 165 --------------------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
                               V  Y+ LI+GL K     E + L   M ++G   +   Y+
Sbjct: 562 ETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYN 621

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T I   C  G V  +  +L +M  +G  P + ++ S++ G     R  EA  L+      
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   NVV YS+LI G    G +DEA  +  ++ +    PNV T++ L+D   KA  +  A
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              +  M +   +PN + Y+ ++  LC+   F++A    ++M  +   PNT+T+ T I G
Sbjct: 742 LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G +  A  L ++ K    +P+  +YN +++GL    R  EA+++  E    G  ++
Sbjct: 802 LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIH 861

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             T   +L  + +    +E   ++G +L E  K
Sbjct: 862 TKTCIALLDAL-QKDECLEQAAIVGAVLREIAK 893



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/519 (23%), Positives = 230/519 (44%), Gaps = 41/519 (7%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
            Y+ LL  + KN + D   ++L EM   G  P   +   ++ S  K  ++ E  +L    
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              +F    S Y  LI  L    + +    L  +M + G + +V  ++T+I      G +
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +L +L +M     + +I  +   +  +   G+   A   ++ +   G LP+ V Y+++
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC    +DEAV +  QME+N   P    Y+ +I G+  AG    A  +  R  + GC
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+V+AY C++  L +     +A    E+M  ++  PN  T+N  I  LC  G V+ A K
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFK 428

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + D MK+    PN+ T N ++D L +  ++ EA  +   +       + VT+ +++ G+ 
Sbjct: 429 VRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLG 488

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-------------- 502
           + G V +A++L  +ML      +A+ +  +I ++ K G+  +  ++              
Sbjct: 489 KQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLR 548

Query: 503 -----LDRIRGGGE---------------WNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
                +D +   GE               + PD++SY+ L+ G+  +G  +E +     M
Sbjct: 549 LLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM 608

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             +G   +   +N  +   F   G +   Y L + M  K
Sbjct: 609 KEQGCVLDTHAYNTFIDG-FCKSGKVNKAYQLLEEMKTK 646


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  269 bits (687), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 274/538 (50%), Gaps = 12/538 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I  +    + E A+ +F + ++ GL+ + +  N +L  L   NR   +  ++  M
Sbjct: 181 VFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEM 240

Query: 92  KRDGMEPNVFTYNILLKALCKNN------RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           K  G  PNVFTY I++   CK N          A ++L EM   G +P  V+Y+T +  +
Sbjct: 241 KSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGL 300

Query: 146 CKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C++G VE A +      S      V  YNA+I+GLCK+ +++EA  +L EM   GI P+V
Sbjct: 301 CRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDV 360

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            TYS +I   C  G+VE  L ++ +M      P++ S++SL  G      +  + D++  
Sbjct: 361 YTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRD 420

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           +   G+  +  AYS LI G C  G +D A  +  +M  N+  P+ + + +L+ GF K G 
Sbjct: 421 LGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGL 480

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
            + A + +N M+  G  P++     ++   C+     +A +L+ +M  +   PN  T+N 
Sbjct: 481 WVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNA 540

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC   + + A++L   M +   LP++  Y+ L+DG  + +  ++A  L   + K G
Sbjct: 541 VINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIG 600

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  ++V Y  +++ +C    + EA+ L  KM   G   D I++  +I  +C+ G +  A 
Sbjct: 601 VTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAW 660

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            L + +   G   P +++YTSL+ G C    +  A + + +M  +GI P+  T+NVL+
Sbjct: 661 ALFNEMLQRGHL-PTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLI 717



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 241/486 (49%), Gaps = 7/486 (1%)

Query: 8   KCEIDGVQY--LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           + +ID  Q   +L++M+  G S +   + + I    RVG  E AL     +        V
Sbjct: 266 EADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNV 325

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             YN I+  L  +        +   MK  G+ P+V+TY+IL+   CK   V+    L+ E
Sbjct: 326 YCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEE 385

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHK 180
           M      P  VSY+++   +CK    + + ++    G+       + Y+ LI G C +  
Sbjct: 386 MKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++ A  L+ EMV   + P+   + +++   C +G    +L     M   G  P+I +   
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++  +   GR  EA +L N M  +G  PN+  Y+ +I+ LC     + A+ +   M + +
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V  YS LIDGFAK  N   A  ++ RM+  G +P++VAYT ++ +LC  +   +A+
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L +KM      P+ +++ + I G C  G +  A  L ++M Q   LP + TY  L+DG 
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            ++NR+  A  L+ E+++ GI  ++VTYN ++    R G + +A ++L +M   G   D 
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDH 745

Query: 481 ITFNII 486
           +T+ ++
Sbjct: 746 MTYMML 751



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 182/409 (44%), Gaps = 10/409 (2%)

Query: 162 GSGVSVYNALINGLCKEHKIE-EAFWLLCEMVDRGIDP--NVITYSTIISSLCDVGNVET 218
           G  + VY  L + +C  +K+  +AF L   +++   D   +VI +  +I        +E 
Sbjct: 138 GMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLEN 197

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ +  Q    G   +  S   LLK      R      L+  M   G  PNV  Y+ +++
Sbjct: 198 AVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMN 257

Query: 279 GLCSN--GSMD----EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
             C    G  D    +A  +  +ME N   P V TYS  I G  + G +  A      +I
Sbjct: 258 FYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLI 317

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S     NV  Y  ++  LC+     +A  ++E+M      P+  T++  I G C  G V+
Sbjct: 318 SANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVE 377

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             + L+++MK     P++ +Y+ L  GL +      + ++  ++   G + +   Y+ ++
Sbjct: 378 KGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILI 437

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G C  G +  A +L+ +M+      D   F  +++ +CK G   NA++  + +  GG  
Sbjct: 438 KGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGIL 497

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            P I +   ++   C  G ++EA   + +M  +GI PN  T+N ++  L
Sbjct: 498 -PSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRL 545


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 272/502 (54%), Gaps = 6/502 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A+  F R+      P +  +  IL +L+    + ++  ++  M+  G++ N  T NIL+
Sbjct: 32  DAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILI 91

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS 166
            + C   +++ A+ +  ++   G  PD ++YTT++  +C  GQV+E+     R  S G+ 
Sbjct: 92  NSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIK 151

Query: 167 V----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           +    Y  LINGLCK  +   A  LL ++      P+V+ Y+TII  LC    V  +  +
Sbjct: 152 LDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDL 211

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +MF +   PN+ ++TSL+ G+ + G+  +A  L N M+ +   PNV  ++TL+ GLC 
Sbjct: 212 YCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCK 271

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G M EA S+   M +    P+V TY+AL+DG+        A  ++N M   G + +V +
Sbjct: 272 EGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHS 331

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y+ M+  L +  M  +A  L E M  EN  P+ V +++ I GLC  GR++ A+K +D+M 
Sbjct: 332 YSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMH 391

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                PN+ TY  L+D L + ++V +A  L+ +I+  GIQ N+ TYN ++ G+C+ G + 
Sbjct: 392 DRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLT 451

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A ++   +L++G  +D +T++I+I   CK+   + A+ LL ++   G   PD I+Y ++
Sbjct: 452 DAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG-CVPDAIAYETI 510

Query: 523 LWGICNSGGMQEAFIYLQKMLN 544
           +          +A   L++M++
Sbjct: 511 INAFFEKDMNDKAEKLLREMID 532



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 239/464 (51%), Gaps = 5/464 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V +L Q+M++ G+  +      +INSY  +     A  +F +I + G +P +  Y  ++ 
Sbjct: 68  VIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIR 127

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    +       +  +   G++ +  +Y  L+  LCK  +   A +LL ++  + C P
Sbjct: 128 GLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRP 187

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D V Y TI+  +CK   V +A +L       R    V  Y +LI G C   ++++AF LL
Sbjct: 188 DVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLL 247

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EMV + ++PNV T++T++  LC  G +  +  ++  M   G  P++ ++ +L+ GY L 
Sbjct: 248 NEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLV 307

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               +A +++N M + G   +V +YS +I GL     +DEA+ +   M   +  P+V  Y
Sbjct: 308 KEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAY 367

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S+LIDG  K+G +  A +  + M   G  PNV+ YT ++  LC+++   +A +L++K+  
Sbjct: 368 SSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKD 427

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +    N  T+N  + GLC  GR+  A K+   +       ++ TY+ +++GL + +   E
Sbjct: 428 QGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDE 487

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           A  L++++E  G   + + Y TI++      M  +A +LL +M+
Sbjct: 488 ALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 211/407 (51%), Gaps = 1/407 (0%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R L MR    +  +  ++  L K         L   M   GI  N IT + +I+S C + 
Sbjct: 39  RMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLR 98

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            + ++  +  ++   G  P+I ++T+L++G  L G+  E+ +  +R++ +G   + V+Y 
Sbjct: 99  QINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYG 158

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI+GLC  G    A+ +  ++E   C P+V  Y+ +IDG  K   +  A  ++  M   
Sbjct: 159 TLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEK 218

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
              PNVV YT ++   C      +A  L+ +M  +N  PN  TFNT + GLC  G++  A
Sbjct: 219 RVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREA 278

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             L+  M +    P++ TYN L+DG   V    +A  +   + + G+  ++ +Y+ ++ G
Sbjct: 279 KSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISG 338

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           + +  M+ EA  L   M  E    D + ++ +I   CK G++N+A++ +D +   G+  P
Sbjct: 339 LSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQ-PP 397

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++I+YTSL+  +C S  + +A   L+K+ ++GI  N  T+N+LV  L
Sbjct: 398 NVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGL 444



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 166/313 (53%), Gaps = 7/313 (2%)

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A D +NRM+R    P ++ +  ++  L         + +  +ME +    N  T + L
Sbjct: 31  NDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNIL 90

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ +     +  A  ++ +++  G  P+++ YT +++ LC N    ++ +  +++  +  
Sbjct: 91  INSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGI 150

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + V++ T I GLC  G+   A++LL +++   C P++  YN ++DGL +   V++AF+
Sbjct: 151 KLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFD 210

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+ +  +  N+VTY ++++G C  G + +AF LL +M+++    +  TFN ++   C
Sbjct: 211 LYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLC 270

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG---ICNSGGMQEAFIYLQKMLNEGIC 548
           K+GK+  A  L+  +   G   PD+ +Y +L+ G   +  +G  +  F  + +M   G+ 
Sbjct: 271 KEGKMREAKSLVAVMMKEGV-GPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQM---GVT 326

Query: 549 PNFATWNVLVRSL 561
            +  +++V++  L
Sbjct: 327 CDVHSYSVMISGL 339



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 147/303 (48%), Gaps = 2/303 (0%)

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           R      +PN     +  H   S  ++++A+    +M     PP +  +  ++    K  
Sbjct: 5   RFRFHSIIPNSTLLLSHTH-FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTK 63

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +      ++ RM  +G   N +    ++   C     + A S+  K+      P+ +T+ 
Sbjct: 64  HYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYT 123

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I+GLC  G+V  ++   D++       +  +Y  L++GL ++ +   A  L+ +IE  
Sbjct: 124 TLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGE 183

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
             + ++V YNTI+ G+C+  +V +AF L  +M  +    + +T+  +IY +C  G+++ A
Sbjct: 184 ICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKA 243

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             LL+ +      NP++ ++ +L+ G+C  G M+EA   +  M+ EG+ P+  T+N L+ 
Sbjct: 244 FGLLNEMVLKNV-NPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMD 302

Query: 560 SLF 562
             F
Sbjct: 303 GYF 305



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 147/292 (50%), Gaps = 5/292 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL +M ++ V+ +   F ++++   + G   +A  +   + + G+ P V  YN
Sbjct: 239 QLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYN 298

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D             +++ M + G+  +V +Y++++  L K   +D A  L   M N+
Sbjct: 299 ALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNE 358

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
              PD V+Y++++  +CK G++  A +             V  Y +LI+ LCK H++++A
Sbjct: 359 NVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKA 418

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL ++ D+GI  N+ TY+ ++  LC  G +  +  +   + ++G N ++ +++ ++ G
Sbjct: 419 IALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMING 478

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
                   EA  L ++M  +G +P+ +AY T+I+        D+A  +  +M
Sbjct: 479 LCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 142/267 (53%), Gaps = 5/267 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++ ++   + L+  M  EGV      + ++++ Y  V  A +A  +F  + + G
Sbjct: 265 LVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMG 324

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  Y+ ++  L           ++  M+ + + P+V  Y+ L+  LCK+ R++ A 
Sbjct: 325 VTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSAL 384

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           K + EM ++G  P+ ++YT+++ ++CK  QV++A  L  +       + +  YN L++GL
Sbjct: 385 KYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGL 444

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+ ++ +A  +  +++ +G + +V+TYS +I+ LC     + +L +L +M  +GC P+ 
Sbjct: 445 CKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDA 504

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI 262
            ++ +++  +       +A  L   MI
Sbjct: 505 IAYETIINAFFEKDMNDKAEKLLREMI 531


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 288/559 (51%), Gaps = 12/559 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +   +M+  G   +   +  +I+   + GL  +AL+M+ R+   GLKP++K ++ ++ A 
Sbjct: 180 FAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVAT 239

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                   +  +   M+  G++PN++TY I ++ L +  R+D A +++  M + GC PD 
Sbjct: 240 GKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDV 299

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGL--CKEHKIEEAFWLL 188
           V+YT ++ ++C  G++++A EL ++  +         Y  +++    C +    + FW  
Sbjct: 300 VTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFW-- 357

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM   G  P+VIT++ ++++LC  GN++ +  +L  M  +G  PN+H++ +L+ G L  
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  +A DL+N M   G +P    Y   I     +G  D+A+    +M+     PN+   
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +A +   A+ G L  A  I+NR+ SNG +P+ V Y  M+K   +     +A  L+  M+ 
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
             C P+ +  N+ I  L   GRVD A K+  ++K  +  P + TYN L+ GL +  +V+ 
Sbjct: 538 NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A EL   +   G   N +T+NTIL  +C+   V  A ++L KM       D +TFN II+
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE-GI 547
               + +V++AI L  +++      PD ++  +LL G+  +G M++AF   +  ++  G+
Sbjct: 658 GLVIEKRVSDAIWLFHQMK--KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGV 715

Query: 548 CPNFATWNVLVRSLFSNLG 566
             +   W  L+  + +  G
Sbjct: 716 YVDRRFWEDLMGGILTQAG 734



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 164/620 (26%), Positives = 272/620 (43%), Gaps = 77/620 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           + ++M +EG+  S   F +++ +  +    E    +   +   GLKP +  Y   +  L 
Sbjct: 216 MYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLG 275

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      I   M+ DG  P+V TY +L+ ALC   ++D A +L V+M      PD V
Sbjct: 276 RAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV 335

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++      G +   +E      A  +   V  +  L+N LCK   I+EAF LL  M
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILG--------------------------- 224
             +G+ PN+ TY+T+IS L  V  ++ +L +                             
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455

Query: 225 --------QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                   +M +RG  PNI +  + L      GR  EA  ++NR+   G  P+ V Y+ +
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +      G +DEA+ +   M EN C P++   ++LI+   KAG +  A +++ R+     
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKL 575

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P VV Y  ++  L +     +A  L   M    CPPNT+TFNT +  LC    VD A+K
Sbjct: 576 APTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALK 635

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +L +M    C+P++ T+N ++ GL+   RV +A  L  +++K  +  + VT  T+L GV 
Sbjct: 636 MLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVV 694

Query: 457 RAGMVVEAFQ--------------------LLGKMLIEGTKLDAITFN------------ 484
           + G++ +AF+                    L+G +L +      I F             
Sbjct: 695 KNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDG 754

Query: 485 ----IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
                II   CK  +   A  +  R        P + SY  L+ G       + A+    
Sbjct: 755 SVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFT 814

Query: 541 KMLNEGICPNFATWNVLVRS 560
           +M N G  P+  T+N+L+ +
Sbjct: 815 EMKNAGCAPDVFTYNLLLDA 834



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 159/599 (26%), Positives = 284/599 (47%), Gaps = 54/599 (9%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             +D    L   M+  GV  +   +I  I+ Y + G +++AL+ F +++  G+ P +   N
Sbjct: 419  RLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACN 478

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
              L +L    R      I++ +K +G+ P+  TYN+++K   K  +VD A +LL +M   
Sbjct: 479  ASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSEN 538

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
             C PD +   ++++++ K G+V+EA     R   M+    V  YN LI GL KE +++ A
Sbjct: 539  QCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRA 598

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L   M   G  PN IT++TI+  LC    V+ +L +L +M    C P++ +F +++ G
Sbjct: 599  MELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHG 658

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPP 303
             ++  R  +A  L+++M ++   P+ V   TL+ G+  NG M++A  ++           
Sbjct: 659  LVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYV 717

Query: 304  NVTTYSALIDG-FAKAGN----LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
            +   +  L+ G   +AG     L G   +  R+  +G          ++KVLC++     
Sbjct: 718  DRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGS-----VLMPIIKVLCKHKQALV 772

Query: 359  AHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A S+  +   E    P   ++N  I+G  G    + A  L  +MK   C P++ TYN LL
Sbjct: 773  AQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLL 832

Query: 418  DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI-------------------------- 451
            D   +  ++ E FEL  ++     + N +T+N I                          
Sbjct: 833  DAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFS 892

Query: 452  ---------LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
                     L G+ ++G + EA +L  +M+  G + +   +NI+I  + K G VN A +L
Sbjct: 893  PTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACEL 952

Query: 503  LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              R+   G   PD+ SYTSL+  +C +G + +A  Y +K+   G+  +   +N+++  L
Sbjct: 953  FKRMVREG-IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGL 1010



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 272/558 (48%), Gaps = 11/558 (1%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++D    LL  M          V  S+IN+  + G  ++A KMF R+++  L PTV  YN
Sbjct: 524  QVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYN 583

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++  L  E +      ++++M  +G  PN  T+N +L  LCKN+ VD A K+L +M   
Sbjct: 584  TLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTM 643

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             C PD +++ TI+  +    +V +A     ++             L+ G+ K   +E+AF
Sbjct: 644  NCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAF 703

Query: 186  WLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFV--RGCNPNIHSFTSLL 242
             +  + V R G+  +   +  ++  +      E ++ + G   V  R C         ++
Sbjct: 704  KIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTI-LFGDRLVCGRVCKDG-SVLMPII 761

Query: 243  KGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
            K      +   A  ++ R  +E G  P + +Y+ LI G     + + A ++  +M+   C
Sbjct: 762  KVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGC 821

Query: 302  PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
             P+V TY+ L+D   K+G +    +++ +MI + C PN + +  ++  L ++N   +A  
Sbjct: 822  APDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALD 881

Query: 362  LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            L   +   +  P   T+   + GL   GR++ A +L ++M  Y C PN   YN L++G  
Sbjct: 882  LFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941

Query: 422  RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
            +   V  A EL   + + GI+ ++ +Y +++  +C AG V +A     K+   G  LD+I
Sbjct: 942  KTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI 1001

Query: 482  TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
             +N++I    +  ++  A+ L D ++  G  NPD+ +Y SL+  +  +G +++A    ++
Sbjct: 1002 AYNLMIDGLGRSHRIEEALTLYDEMQSRG-INPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060

Query: 542  MLNEGICPNFATWNVLVR 559
            +   G+ PN  T+N L+R
Sbjct: 1061 LQFIGLEPNVFTYNALIR 1078



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 232/525 (44%), Gaps = 43/525 (8%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  LG++ ++     L   M   G   +   F ++++   +    + ALKM Y++    
Sbjct: 585  LIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN 644

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P V  +N I+  L+ E R S    ++  MK+  + P+  T   LL  + KN  ++ A+
Sbjct: 645  CMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMEDAF 703

Query: 121  KL------------------------LVEMGNKGC------------APDAVSYTTIVSS 144
            K+                        L + G +                D      I+  
Sbjct: 704  KIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKV 763

Query: 145  ICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            +CK  Q   A+ + +RF   + V      YN LI G    H  E A+ L  EM + G  P
Sbjct: 764  LCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAP 823

Query: 199  NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
            +V TY+ ++ +    G +     +  QM    C PN  +   ++   +      +A DL+
Sbjct: 824  DVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLF 883

Query: 259  NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
              ++   F P    Y  L+ GL  +G ++EA  +  +M +  C PN   Y+ LI+GF K 
Sbjct: 884  YDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKT 943

Query: 319  GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
            G++  A +++ RM+  G  P++ +YT +V  LC+      A    EK+       +++ +
Sbjct: 944  GDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAY 1003

Query: 379  NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            N  I GL    R++ A+ L D+M+     P++ TYN L+  L     V++A +L  E++ 
Sbjct: 1004 NLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQF 1063

Query: 439  CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             G++ N+ TYN ++ G   +G    A+ +  +M++ G   +  TF
Sbjct: 1064 IGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 190/441 (43%), Gaps = 71/441 (16%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++ I  ++ TY  I   L   G +  +    G+M   G + N +S+  L+   L  G 
Sbjct: 150 MQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGL 209

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +++ RM+ EG  P++  +S L+         +   S+  +ME     PN+ TY+ 
Sbjct: 210 CREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTI 269

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM---- 366
            I    +AG +  A +I  RM  +GC P+VV YT ++  LC       A  L  KM    
Sbjct: 270 CIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS 329

Query: 367 -------------AFENC------------------PPNTVTFNTFIKGLCGCGRVDWAM 395
                         F +C                   P+ +TF   +  LC  G +D A 
Sbjct: 330 HKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAF 389

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC---------------- 439
            LLD M++   LPN+ TYN L+ GLLRVNR+ +A +L   +E                  
Sbjct: 390 HLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFY 449

Query: 440 -------------------GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                              GI  NIV  N  L+ +   G + EA  +  ++   G   D+
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDS 509

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N+++  Y K G+V+ AI+LL  +    +  PDII   SL+  +  +G + EA+    
Sbjct: 510 VTYNMMMKCYSKAGQVDEAIELLSDM-SENQCEPDIIVINSLINTLYKAGRVDEAWKMFC 568

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           ++ +  + P   T+N L+  L
Sbjct: 569 RLKDMKLAPTVVTYNTLIAGL 589



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 142/634 (22%), Positives = 265/634 (41%), Gaps = 77/634 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    ++D    L  +MK          +I++++ +   G   +  + +  +   G
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  +  +++AL           +   M++ G+ PN+ TYN L+  L + NR+D A 
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGL 175
            L   M   G  P A +Y   +    K G+ ++A E    + +R     +   NA +  L
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  ++ EA  +   +   G+ P+ +TY+ ++      G V+ ++ +L  M    C P+I
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDI 544

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
               SL+      GR  EA  ++ R+      P VV Y+TLI GL   G +  A+ +   
Sbjct: 545 IVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFAS 604

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N CPPN  T++ ++D   K   +  A ++  +M +  C P+V+ +  ++  L     
Sbjct: 605 MTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPNITTYN 414
              A  L  +M  +   P+ VT  T + G+   G ++ A K+  D + +     +   + 
Sbjct: 665 VSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWE 723

Query: 415 ELLDGLL------------------RVNR------------VKEAFELVTE------IEK 438
           +L+ G+L                  RV +             K    LV +       ++
Sbjct: 724 DLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE 783

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G++  + +YN ++ G         A+ L  +M   G   D  T+N+++ A+ K GK+N 
Sbjct: 784 LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINE 843

Query: 499 AIQL----------------------------LDRIRG------GGEWNPDIISYTSLLW 524
             +L                            LD+          G+++P   +Y  LL 
Sbjct: 844 LFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLD 903

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G+  SG ++EA    ++M++ G  PN A +N+L+
Sbjct: 904 GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILI 937



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 174/361 (48%), Gaps = 11/361 (3%)

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            L P +K+      AL+A++ F          K  G++P + +YN L++     +  + A+
Sbjct: 757  LMPIIKVLCKHKQALVAQSVFIRFT------KELGVKPTLESYNFLIEGFLGVHNDEMAW 810

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
             L  EM N GCAPD  +Y  ++ +  K G++ E  EL  +            +N +I  L
Sbjct: 811  NLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANL 870

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             K + +++A  L  ++V     P   TY  ++  L   G +E +  +  +M   GC PN 
Sbjct: 871  VKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNN 930

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
              +  L+ G+   G  + A +L+ RM+REG  P++ +Y++L+  LC  G +D+A+    +
Sbjct: 931  AIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEK 990

Query: 296  MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            +++     +   Y+ +IDG  ++  +  A  +++ M S G +P++  Y  ++  L    M
Sbjct: 991  LKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGM 1050

Query: 356  FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              QA  L E++ F    PN  T+N  I+G    G  D A  +  +M    C PN  T+ +
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQ 1110

Query: 416  L 416
            L
Sbjct: 1111 L 1111



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 141/302 (46%), Gaps = 1/302 (0%)

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           ++N M  +    ++  Y  +  GL   G + +      +M E     N  +Y+ LI    
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           ++G    A +++ RM+  G  P++  ++ ++    +        SL+E+M      PN  
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+   I+ L   GR+D A +++ +M+   C P++ TY  L+D L    ++ +A EL  ++
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +    + + VTY T+L      G +    +   +M  +G   D ITF I++ A CK G +
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNI 385

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A  LLD +R  G   P++ +Y +L+ G+     + +A      M   G+ P   T+ +
Sbjct: 386 DEAFHLLDVMRKQGVL-PNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL 444

Query: 557 LV 558
            +
Sbjct: 445 FI 446



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%)

Query: 5    LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
            L E   +D   +  +++K  G+      +  +I+   R    E+AL ++  ++  G+ P 
Sbjct: 975  LCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPD 1034

Query: 65   VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
            +  YN ++  L           +Y  ++  G+EPNVFTYN L++    +   D AY +  
Sbjct: 1035 LFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYK 1094

Query: 125  EMGNKGCAPDAVSYTTI 141
             M   GC+P+  ++  +
Sbjct: 1095 RMMVGGCSPNTGTFAQL 1111


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 164/559 (29%), Positives = 275/559 (49%), Gaps = 33/559 (5%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           G +  V    R +G     +++F  + R+ G + +V  YN  LDAL   N   +    + 
Sbjct: 3   GRYTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQ 62

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            M+R G  P+ FTY+I+L+ LCK   +D A +LL ++   G   + ++Y+ ++   CK  
Sbjct: 63  QMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKAS 122

Query: 150 QVEEARELAMRFGSG------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           +V++A E+     SG      V  +N+L+ GLC   ++ EAF L   M   G +PNVI+Y
Sbjct: 123 RVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY 182

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           ST++  LC  G ++ +  +  +M  + C P++ ++TS + G     R  EA D   +M+ 
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 264 EGFLPNVVAYST-----------------LIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           +G   + VA+ST                 +I  LC +G +DEA     +M   + PP+  
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNG---CSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            ++ LI    K+  L     ++ RM S     C PN+  Y  MV  LC+     +A  L+
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +MA     P+ VT++  + GLC  G++D A  LL++M +    P+  T   +L+ L + 
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +V  A   +  ++  G   ++VTYNT+L G+C+AG + EA   L KM+      D  ++
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            III A C+ G+   A  +   +   G   PD + Y SLL G+  +G    A     ++L
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVL-PDTVLYHSLLDGLARNGLEDLAL----ELL 537

Query: 544 NEGIC-PNFATWNVLVRSL 561
              +C P+F    +++  L
Sbjct: 538 KTSLCKPDFVMHKMVLDGL 556



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 158/563 (28%), Positives = 274/563 (48%), Gaps = 35/563 (6%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            QQM+  G    +  +  V+    + G  ++A ++  ++RE G+K  V  Y+ ++D    
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120

Query: 78  ENRFSMINPIYSNMKR-DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +R      I+  M    G  P+V T+N LLK LC   R+  A+ L   M   GC P+ +
Sbjct: 121 ASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVI 180

Query: 137 SYTTIVSSICKLGQVEEAREL--AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEM 191
           SY+T++  +CK G+++EA  L   M   S V     Y + + GLCK +++ EA     +M
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G   + + +ST+I  LC  G+ E +     QM    C                 G  
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEA---QNQMIEHLCR---------------SGML 282

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ---MEENSCPPNVTTY 308
            EA   +  MI     P+   ++TLIH +C +  + + V +  +   M+E  CPPN+ TY
Sbjct: 283 DEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETY 342

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++D   KA  L  A ++ N M + G SP+VV Y+ +V  LC+     +A  L+E+M+ 
Sbjct: 343 NIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E   P++ T  + +  L   G+VD+A+  L+ MK     P++ TYN LLDGL +  R+ E
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDE 462

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A   + ++       ++ +Y  I+  +CR+G    A  +  +M+  G   D + ++ ++ 
Sbjct: 463 AITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLD 522

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
              + G  + A++LL          PD + +  +L G+C +G  ++A   +++M + G  
Sbjct: 523 GLARNGLEDLALELLKT----SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFP 578

Query: 549 PNFATWNVLVRSLFSNLGHLGPV 571
            +  T+     S+ S L  LG V
Sbjct: 579 ADAFTYI----SVVSGLRKLGKV 597



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 247/520 (47%), Gaps = 64/520 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIY 68
           E+D  + LL Q++  GV  +   +  VI+   +    + AL++F  +   G   P V  +
Sbjct: 88  ELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTF 147

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N +L  L +  R S    ++  M + G EPNV +Y+ LL  LCK  R+D A +L  EM  
Sbjct: 148 NSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVE 207

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEE------------ARELAMRF----------GSGVS 166
           K C PD V+YT+ V+ +CK  +V E            ++  A+ F          G    
Sbjct: 208 KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEE 267

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDR------------------------GI------ 196
             N +I  LC+   ++EA     EM+ R                        G+      
Sbjct: 268 AQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRM 327

Query: 197 --------DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
                    PN+ TY+ ++ +LC    ++ +  ++ +M   G +P++ ++++L+ G    
Sbjct: 328 KSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKL 387

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+   A DL   M +EG  P+    +++++ L   G +D A+S    M+     P++ TY
Sbjct: 388 GKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTY 447

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + L+DG  KAG +  A     +M++  C+P+V +YT ++  LC++     AH++ ++M  
Sbjct: 448 NTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVK 507

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+TV +++ + GL   G  D A++LL   K   C P+   +  +LDGL +  + ++
Sbjct: 508 RGVLPDTVLYHSLLDGLARNGLEDLALELL---KTSLCKPDFVMHKMVLDGLCKAGKAED 564

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           A E+V  +   G   +  TY +++ G+ + G V +A QL+
Sbjct: 565 ACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLV 604



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 200/448 (44%), Gaps = 63/448 (14%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A  +F  + + G +P V  Y+ +LD L    R      ++  M      P++  Y   +
Sbjct: 162 EAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFV 221

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV-----------------SSICKLGQ 150
             LCK NRV  A     +M  KG   DAV+++T++                   +C+ G 
Sbjct: 222 TGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGM 281

Query: 151 VEEA---------------REL----------AMRFGSGV------------------SV 167
           ++EA                EL          + R   GV                    
Sbjct: 282 LDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLET 341

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN +++ LCK  +++EA  L+ EM + G+ P+V+TYS ++  LC +G ++ +  +L +M 
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +  S+L      G+   A      M   G  P++V Y+TL+ GLC  G +D
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA++   +M    C P+V +Y+ +I    ++G   GA  I+  M+  G  P+ V Y  ++
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             L +N +   A   +E +    C P+ V     + GLC  G+ + A +++++M      
Sbjct: 522 DGLARNGLEDLA---LELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFP 578

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTE 435
            +  TY  ++ GL ++ +V +A +LV +
Sbjct: 579 ADAFTYISVVSGLRKLGKVDKARQLVDD 606



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 33/289 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L +  ++D  Q L+ +M   G+S     + ++++   ++G  ++A  +   + + G
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P       IL+AL    +          MK  G  P++ TYN LL  LCK  R+D A 
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
             L +M    C PD  SYT I++++C+ GQ   A                        H 
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA------------------------HA 500

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I +      EMV RG+ P+ + Y +++  L   G  + +L +L       C P+      
Sbjct: 501 IFQ------EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKM 551

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           +L G    G+  +A ++  RM   GF  +   Y +++ GL   G +D+A
Sbjct: 552 VLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKA 600


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 265/507 (52%), Gaps = 9/507 (1%)

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           TV  Y  ++D      R  +    ++ + R G+  +    N  LK LC   R D A  +L
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML 223

Query: 124 VE-MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG------VSVYNALINGLC 176
           +  M   GC PDA SY T++ S+C   + +EA ++ +R   G      V  Y  +I+GL 
Sbjct: 224 LHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLF 283

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
            E +I +A  L  EMV +G+ PNV+TY++I+ +LC    ++ +  +L QMF     P+  
Sbjct: 284 MEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEV 343

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++T+++ GY   GR  EA+ ++  M REG +P++V +++L+  LC +    EA  + + +
Sbjct: 344 TYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSI 403

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
                 P++ +YS L+ G+A  G  +  + +++ M  NG   +   +  ++    +  M 
Sbjct: 404 ATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMM 463

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  +  +M  +   PN VT+ T I  LC  GR+  AM+ L QM      PN   Y+ L
Sbjct: 464 DEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSL 523

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           + G      + +A ELV+E+   GI + NI  +++I+H +C  G V+ A  +   ++  G
Sbjct: 524 IQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIG 583

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + D  TFN +I  YC  GK++ A  +LD +   G   PD+++Y++L+ G   SG + + 
Sbjct: 584 DRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGT-EPDVVTYSTLINGYFKSGRIDDG 642

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLF 562
            I  ++ML + + P   T+++++  LF
Sbjct: 643 LILFREMLCKRVKPTTVTYSLVLDGLF 669



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 263/495 (53%), Gaps = 10/495 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           + ++M  EG+      F S+++S  +   +++A ++F+ I   G KP +  Y+ +L    
Sbjct: 364 MFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYA 423

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E RF  +N ++ +M  +G+  +   +NIL+ A  K   +D A  +  EM  +G +P+ V
Sbjct: 424 TEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVV 483

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T+++++C++G++ +A E     +++       VY++LI G C    + +A  L+ EM
Sbjct: 484 TYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEM 543

Query: 192 VDRGID-PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +D+GI  PN+  +S+II SLC+ G V  +  +   +   G  P+I +F SL+ GY L G+
Sbjct: 544 MDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGK 603

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A  + + M+  G  P+VV YSTLI+G   +G +D+ + +  +M      P   TYS 
Sbjct: 604 MDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSL 663

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++DG  +AG    A ++++ MI +G + ++  YT +++ LC+NN   +A +L  K+   N
Sbjct: 664 VLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMN 723

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
                   NT I  L    R + A  L   +     +PN +TY  ++  LL+   V+EA 
Sbjct: 724 LKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEAD 783

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT--KLDAITFNIIIY 488
            + + +EK G   +    N I+  + + G +V+A   + K  ++GT   L+A T +++I 
Sbjct: 784 IMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSK--VDGTIISLEASTTSLLIS 841

Query: 489 AYCKQGKVNNAIQLL 503
            +  +G+    I+ L
Sbjct: 842 LFASKGRYREQIKFL 856



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 266/525 (50%), Gaps = 11/525 (2%)

Query: 47  EQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNVFTYN 104
           ++AL M  +R+ E G  P    YN ++ +L   +R    ++ +    K DG  P+V +Y 
Sbjct: 217 DEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYT 276

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--FG 162
           +++  L     +  A  L  EM  KG  P+ V+Y +IV ++CK   +++A EL +R  F 
Sbjct: 277 MVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA-ELVLRQMFD 335

Query: 163 SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           + +      Y A+I+G     + +EA  +  EM   G+ P+++T+++++ SLC     + 
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKE 395

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  I   +  +G  P+I S++ LL GY   GR  + ++L++ M   G + +   ++ LI+
Sbjct: 396 AAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
                G MDEA+ +  +M      PNV TY+ +I    + G L  A +  ++MIS G  P
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKP 515

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP-PNTVTFNTFIKGLCGCGRVDWAMKL 397
           N V Y  +++  C +    +A  L+ +M  +  P PN   F++ I  LC  GRV  A  +
Sbjct: 516 NTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDV 575

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            + +      P+I T+N L+DG   V ++ +AF ++  +   G + ++VTY+T+++G  +
Sbjct: 576 FNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFK 635

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           +G + +   L  +ML +  K   +T+++++    + G+ + A ++   +   G     I 
Sbjct: 636 SGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM-SIS 694

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +YT +L G+C +    EA     K+    +    A  N ++ +L+
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALY 739



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 271/593 (45%), Gaps = 43/593 (7%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNH 70
           + +  LL +M   G       + +VI S      +++AL M  R+ +  G  P V  Y  
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTM 277

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L  E   S    +++ M + G+ PNV TYN ++ ALCK   +D A  +L +M +  
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAF 185
             PD V+YT ++     LG+ +EA ++     R G    +  +N+L++ LCK  + +EA 
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397

Query: 186 WLLCEMVDRGIDPNVITYSTIIS----------------SLCDVGNVETS---------- 219
            +   +  +G  P++I+YS ++                 S+ D G V  S          
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 220 ---------LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
                    L I  +M  +G +PN+ ++ +++      GR  +A +  ++MI  G  PN 
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTYSALIDGFAKAGNLLGASQIWN 329
           V Y +LI G C++G + +A  +  +M +   P PN+T +S++I      G ++ A  ++N
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            +I  G  P++  +  ++   C      +A  +++ M      P+ VT++T I G    G
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D  + L  +M      P   TY+ +LDGL R  R   A ++  E+ + G  ++I TY 
Sbjct: 638 RIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYT 697

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            IL G+CR     EA  L  K+     K +    N +I+A  K  +   A  L   +   
Sbjct: 698 IILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSAS 757

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G   P+  +Y  ++  +   G ++EA I    M   G  P+    N ++R L 
Sbjct: 758 G-LVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLL 809



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 269/563 (47%), Gaps = 8/563 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI     L  +M  +GV  +   + S++++  +    ++A  +  ++ +  ++P    Y 
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++       R+     ++  M R+G+ P++ T+N L+ +LCK+ R   A ++   +  K
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEA 184
           G  PD +SY+ ++      G+  +   L         V     +N LIN   K   ++EA
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EM  +G+ PNV+TY+T+I++LC +G +  ++  L QM   G  PN   + SL++G
Sbjct: 467 LLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQG 526

Query: 245 YLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           +   G   +A +L + M+ +G   PN+  +S++IH LC+ G +  A  V   +      P
Sbjct: 527 FCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRP 586

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ T+++LIDG+   G +  A  + + M+S G  P+VV Y+ ++    ++        L 
Sbjct: 587 DIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILF 646

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M  +   P TVT++  + GL   GR   A K+  +M +     +I+TY  +L GL R 
Sbjct: 647 REMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRN 706

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           N   EA  L  ++    ++  I   NT++H + +     EA  L   +   G   +A T+
Sbjct: 707 NCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTY 766

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            ++I    K+G V  A  +   +   G   P       ++  +   G + +A  Y+ K+ 
Sbjct: 767 GVMIINLLKEGSVEEADIMFSSMEKTG-CAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVD 825

Query: 544 NEGICPNFATWNVLVRSLFSNLG 566
              I    +T ++L+ SLF++ G
Sbjct: 826 GTIISLEASTTSLLI-SLFASKG 847



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 13/237 (5%)

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC------GCGRV 391
           P V       +V         AH L +++  ++ P +    N F+  L        C   
Sbjct: 81  PQVAFVAAKARVRAGTFSTEDAHHLFDELLRQDTPVHGRALNGFLAALARARDSVACSDA 140

Query: 392 D-WAMKLLDQMKQYECLPNIT-----TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              A+ L +++ + E  P +      TY  L+D   R  R          + + G++ + 
Sbjct: 141 PALAVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDG 200

Query: 446 VTYNTILHGVCRAGMVVEAFQ-LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +  NT L  +C A    EA   LL +M   G   DA ++N +I + C   +   A+ +L 
Sbjct: 201 IVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLL 260

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           R+  G   +PD++SYT ++ G+   G + +A     +M+ +G+ PN  T+N +V +L
Sbjct: 261 RMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHAL 317


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 155/495 (31%), Positives = 254/495 (51%), Gaps = 23/495 (4%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN ++    +          +  M+R+G  PNV TYN L+ A CK  R+D A+
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
            LL  M +KG  P+ +SY  I++ +C+ G ++EA E+    G  G +     YN L+NG 
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE    +A  +  EMV  G+ P+V+TY+ +I+S+C   N+  ++    QM +RG  PN 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G+   G  +EA  + N M   GF P+VV Y+  IHG C    M+EA+ V  +
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P+V +YS +I GF + G L  A Q+   M+  G SP+ V Y+ +++ LC+   
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L ++M     PP+  T+ T I   C  G ++ A+ L D+M     LP+  TY+ 
Sbjct: 306 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 365

Query: 416 LLDGLLRVNRVKEA----FELVTE------------IEKCGIQLNIVTYNTILHGVCRAG 459
           L++GL +  R +EA    F+L+ E            IE C   +   +   ++ G C  G
Sbjct: 366 LINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS-NIEFKSVVALIKGFCMKG 424

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
           ++ EA ++   M+    K     +N+II+ +C+ G +  A  L   +   G + P  ++ 
Sbjct: 425 LMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSG-FVPHTVTV 483

Query: 520 TSLLWGICNSGGMQE 534
            +L+  +   G  +E
Sbjct: 484 ITLIKALFKEGMNEE 498



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 204/371 (54%), Gaps = 1/371 (0%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+   + PNV TY+ +I   C VG ++  LG  G+M   GC PN+ ++ +L+  Y   GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA  L   M  +G  PN+++Y+ +I+GLC  GSM EA  +  +M      P+  TY+ 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L++G+ K GN   A  I   M+ NG SP+VV YT ++  +C+    ++A    ++M    
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+ T I G    G ++ A ++L++M +    P++ TYN  + G   + R++EA 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            +V E+ + G+  ++V+Y+TI+ G CR G +  AFQ+  +M+ +G   DA+T++ +I   
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C+  ++  A  L   +   G   PD  +YT+L+   C  G + +A     +M+++G  P+
Sbjct: 301 CEMRRLTEACDLSQEMLDMG-LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPD 359

Query: 551 FATWNVLVRSL 561
             T++VL+  L
Sbjct: 360 AVTYSVLINGL 370



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 216/401 (53%), Gaps = 1/401 (0%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R    V  YN LI G C   ++++      EM   G  PNV+TY+T+I + C +G ++ +
Sbjct: 5   RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
            G+L  M  +G  PN+ S+  ++ G    G   EA ++   M  +GF P+ V Y+TL++G
Sbjct: 65  FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C  G+  +A+ +  +M  N   P+V TY+ALI+   KA NL  A + +++M   G  PN
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
              YT ++    +  + ++A+ ++ +M      P+ VT+N FI G C   R++ A+ ++ 
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M +    P++ +Y+ ++ G  R   +  AF++  E+ + G+  + VTY++++ G+C   
Sbjct: 245 EMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR 304

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA  L  +ML  G   D  T+  +I AYC +G +N A+ L D +   G + PD ++Y
Sbjct: 305 RLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG-FLPDAVTY 363

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           + L+ G+      +EA   L K++ E   P+  T++ L+ +
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIEN 404



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 223/461 (48%), Gaps = 20/461 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I++Y ++G  ++A  +   +   G++P +  YN I++ L  E        I   M
Sbjct: 47  TYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM 106

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G  P+  TYN LL   CK      A  +  EM   G +P  V+YT +++S+CK   +
Sbjct: 107 GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNL 166

Query: 152 EEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A E    MR          Y  LI+G  ++  + EA+ +L EM + G  P+V+TY+  
Sbjct: 167 NRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAF 226

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C +  +E +LG++ +M  +G  P++ S+++++ G+   G    A  +   M+ +G 
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+ V YS+LI GLC    + EA  +S +M +   PP+  TY+ LI+ +   G+L  A  
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT------ 380
           + + MI  G  P+ V Y+ ++  L +     +A  L+ K+ +E   P+ VT++T      
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406

Query: 381 ---------FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
                     IKG C  G +  A ++ + M +    P    YN ++ G  R   + +AF 
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           L  E+   G   + VT  T++  + + GM  E  +++G  L
Sbjct: 467 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 211/445 (47%), Gaps = 20/445 (4%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    LL+ M  +G+  +   +  +IN   R G  ++A ++   +   G  P    YN 
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+    E  F     I++ M R+G+ P+V TY  L+ ++CK   ++ A +   +M  +G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
             P+  +YTT++    + G + EA  +        F   V  YNA I+G C   ++EEA 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            ++ EMV++G+ P+V++YSTIIS  C  G ++ +  +  +M  +G +P+  +++SL++G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               R  EA DL   M+  G  P+   Y+TLI+  C  G +++A+ +  +M      P+ 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY---------------TCMVKVL 350
            TYS LI+G  K      A ++  ++I     P+ V Y                 ++K  
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C   + H+A  + E M   N  P    +N  I G C  G +  A  L  +M     +P+ 
Sbjct: 421 CMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHT 480

Query: 411 TTYNELLDGLLRVNRVKEAFELVTE 435
            T   L+  L +    +E  E++ +
Sbjct: 481 VTVITLIKALFKEGMNEEMSEVIGD 505



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 138/321 (42%), Gaps = 27/321 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++Q+M  +G++     + ++I+ + R G  ++A +M   + E G+ P    Y+ ++  L 
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R +    +   M   G+ P+ FTY  L+ A C    ++ A  L  EM +KG  PDAV
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYN--------------------ALINGLC 176
           +Y+ +++ + K  +  EA+ L  +     SV +                    ALI G C
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFC 421

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
            +  + EA  +   MV+R   P    Y+ II   C  GN+  +  +  +M   G  P+  
Sbjct: 422 MKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTV 481

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +  +L+K     G   E S++    +R   L        L+      G+M+  ++VS   
Sbjct: 482 TVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVSRLY 541

Query: 297 EE-------NSCPPNVTTYSA 310
            +       +S PP   T ++
Sbjct: 542 NKLSLKCVASSVPPGALTQTS 562


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 265/464 (57%), Gaps = 12/464 (2%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHK 180
           M   GC P++V++  +V+   K G+  +   L     A      V  YN L+ GLCK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 181 IEEAFWLLCEMVDRG--IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             EA  L+ +M+ RG    P+++TYST++S  C  G VE S  +L ++  RG  P+   +
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T ++       R  EA +L   MIR G  P ++ ++TLI G C   +++ A S+  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +    +V TY+ L+DG  KAG L  A Q+  RM ++GC+P+VVAY+  V  LC++     
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNELL 417
           AH ++E+M   +  PN VT+NT + GLC  G++D A+++++QM   + C  N+  Y+ ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL ++ R +EA  ++  + + G + ++VTY+++++G+C+AG + EA + + +M +EG K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN----PDIISYTSLLWGICNSGGMQ 533
            +A+T+  +++  C  G++  A ++++ +  GG       P + +Y +L+ G+C +G + 
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +A  + Q+M ++G  P+  +++ +V  L  +   L    IL ++
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 146/465 (31%), Positives = 250/465 (53%), Gaps = 14/465 (3%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M R G  PN  T+N L+    K  R     +LL  M  +   P+ VSY  ++  +CKL +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 151 VEEARELAM-------RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
             EA EL         R    +  Y+ L++G CK  K+EE+  LL E++ RG+ P+ + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + +++SLC    +  +L +L +M   GC P + +F +L+ G         A  L  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G   +VV Y+TL+ GLC  G + EA  +  +M+ + C P+V  YS+ + G  K+G +L 
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFI 382
           A Q+  +M  +   PNVV Y  ++  LC++     A  ++E+MA  + C  N V ++T +
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  GR   A  +++ M +  C P++ TY+ L++GL +  +++EA E V E+   G +
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL-----DAITFNIIIYAYCKQGKVN 497
            N VTY +++HG+C  G + EA +++ +M   G           T+N +I   CK G+++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +A++   R+R  G  +PD +SY++++ G+  SG   +A + L ++
Sbjct: 421 DALKFFQRMRSQG-CDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 149/461 (32%), Positives = 250/461 (54%), Gaps = 13/461 (2%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P    +N +++    + R      +   M    ++PNV +YN LL+ LCK  R   A
Sbjct: 5   GCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEA 64

Query: 120 YKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALI 172
            +L+ +M ++G    PD V+Y+T++S  CK G+VEE+REL     S        +Y  ++
Sbjct: 65  EELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVV 124

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
             LCK  ++ EA  LL EM+  G  P +IT++T+IS  C   N+E +  +L +M   G  
Sbjct: 125 ASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVK 184

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++ ++ +L+ G    GR  EA  L  RM   G  P+VVAYS+ ++GLC +G + +A  V
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQV 244

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS-NGCSPNVVAYTCMVKVLC 351
             QM ++   PNV TY+ ++DG  K+G +  A ++  +M S +GC  NVV Y+ +V  LC
Sbjct: 245 LEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A S++E MA   C P+ VT+++ + GLC  G+++ A++ + +M    C PN  
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-----NIVTYNTILHGVCRAGMVVEAFQ 466
           TY  L+ GL    R+ EA  +V E+   G        ++ TYN ++ G+C+AG + +A +
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALK 424

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
              +M  +G   D ++++ I+    + G+   A  +L  +R
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/453 (30%), Positives = 248/453 (54%), Gaps = 13/453 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F +++N + + G      ++   +    ++P V  YN +L+ L    R+     +  +M
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 92  -KRDGME-PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
             R G   P++ TY+ LL   CK  +V+ + +LL E+ ++G  PDA+ YT +V+S+CK  
Sbjct: 72  ISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSA 131

Query: 150 QVEEARELA---MRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           ++ EA EL    +R G   ++  +N LI+G C+E  +E A  LL +M   G+  +V+TY+
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYN 191

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T++  LC  G ++ +  +L +M   GC P++ +++S + G    G+  +A  +  +M   
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLG 323
              PNVV Y+T++ GLC +G +D A+ +  QM   + C  NV  YS ++DG  K G    
Sbjct: 252 HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  +   M   GC P+VV Y+ +V  LC+     +A   + +MA E C PN VT+ + + 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 384 GLCGCGRVDWAMKLLDQM-----KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           GLC CGR+  A +++++M       + C P+++TYN L+ GL +  R+ +A +    +  
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            G   + V+Y+TI+ G+ R+G  ++A  +L ++
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 198/382 (51%), Gaps = 11/382 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++++ Y + G  E++ ++   +   GL+P   +Y  ++ +L    R      +   M
Sbjct: 84  TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEM 143

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G  P + T+N L+   C+   ++ A  LL +M   G   D V+Y T++  +CK G++
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRL 203

Query: 152 EEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA +L  R  +      V  Y++ + GLCK  K+ +A  +L +M D   DPNV+TY+TI
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTI 263

Query: 207 ISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +  LC  G ++T+L ++ QM    GC  N+  +++++ G    GRT EA  +   M R G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV YS+L++GLC  G ++EAV    +M    C PN  TY +L+ G    G L  A 
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383

Query: 326 QIWNRM-----ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           ++   M       + C P+V  Y  ++  LC+      A    ++M  + C P+ V+++T
Sbjct: 384 RMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443

Query: 381 FIKGLCGCGRVDWAMKLLDQMK 402
            ++GL   GR   A  +L +++
Sbjct: 444 IVEGLARSGRALQAEMILSEVR 465



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 11/252 (4%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL++MK  G +     + S +    + G    A ++  ++R+    P V  YN ILD
Sbjct: 206 AEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILD 265

Query: 74  ALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
            L    +      +   M   DG   NV  Y+ ++  LCK  R   A  ++  M   GC 
Sbjct: 266 GLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCR 325

Query: 133 PDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHKIEEAFWL 187
           PD V+Y+++V+ +CK G++EEA    RE+AM      +V Y +L++GLC   ++ EA  +
Sbjct: 326 PDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERM 385

Query: 188 LCEMVDRGI-----DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           + EM   G       P+V TY+ +I  LC  G ++ +L    +M  +GC+P+  S+++++
Sbjct: 386 VEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIV 445

Query: 243 KGYLLGGRTHEA 254
           +G    GR  +A
Sbjct: 446 EGLARSGRALQA 457


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 268/511 (52%), Gaps = 24/511 (4%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G+ P V  YN ++ AL A  R      +  +M+  G  PN  TYN L+ A C+   +DGA
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 120 YKLLVEMGNKGCA-PDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALIN 173
            +++  M  +G A P+ V++ ++V+ +CK G++E AR++    +R G    V  YN L++
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CK   + E+  +  EM  RG+ P+V+T++++I + C  GN+E ++ ++ QM  RG   
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N  +FT+L+ G+   G   +A      M + G  P+VV Y+ LI+G C  G MD A  + 
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +ME     P+V TYS +I G+ K GNL  A Q+  +M+  G  P+ + Y+ +++ LC+ 
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              + A  L E M      P+  T+ T I G C  G V+ A+ L D+M +   LP++ TY
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTY 364

Query: 414 NELLDGLLRVNRVKEAFELVTEIEK---------------CGIQLNIVTYNTILHGVCRA 458
           + L++GL +  R KEA  L+ ++                 C  +    +   +L G C  
Sbjct: 365 SVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMK 424

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G++ EA ++   ML    KLD   ++I+I+ +C+ G V  A+    ++   G ++P+  S
Sbjct: 425 GLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG-FSPNSTS 483

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             SL+ G+   G + EA   +Q +L    CP
Sbjct: 484 TISLVRGLFEEGMVVEADNAIQDLLT--CCP 512



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/497 (30%), Positives = 266/497 (53%), Gaps = 30/497 (6%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M R G+ PNV+TYNIL++ALC   R++ A  ++ +M   GCAP+AV+Y T+V++ C+ G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 151 VEEARELA--MR----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           ++ A  +   MR        +  +N+++NGLCK  ++E A  +  EMV  G+ P+V++Y+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T++S  C VG +  SL +  +M  RG  P++ +FTSL+      G   +A  L  +M   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   N V ++ LI G C  G +D+A+    +M +    P+V  Y+ALI+G+ K G +  A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++   M +    P+VV Y+ ++   C+      A  L +KM  +   P+ +T+++ I+G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   R++ A +L + M Q    P+  TY  L+DG  +   V++A  L  E+ + G+  +
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN---------------IIIYA 489
           +VTY+ +++G+ ++    EA +LL K+  E    D I ++                ++  
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 490 YCKQGKVNNAIQ----LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +C +G +  A +    +LDR      W  D   Y+ L+ G C  G +++A  + ++ML  
Sbjct: 421 FCMKGLMKEADKVYQSMLDR-----NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 475

Query: 546 GICPNFATWNVLVRSLF 562
           G  PN  +   LVR LF
Sbjct: 476 GFSPNSTSTISLVRGLF 492



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 251/507 (49%), Gaps = 25/507 (4%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDALLAE 78
            M+  G + +   + +++ ++ R G  + A ++   +RE G  KP +  +N +++ L   
Sbjct: 35  DMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKA 94

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R      ++  M R+G+ P+V +YN LL   CK   +  +  +  EM  +G  PD V++
Sbjct: 95  GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 154

Query: 139 TTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           T+++ + CK G +E+A       RE  +R       + ALI+G CK+  +++A   + EM
Sbjct: 155 TSLIHATCKAGNLEQAVALVAQMRERGLRMNE--VTFTALIDGFCKKGFLDDALLAVEEM 212

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              GI P+V+ Y+ +I+  C +G ++ +  ++ +M  +   P++ ++++++ GY   G  
Sbjct: 213 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 272

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L  +M+++G LP+ + YS+LI GLC    +++A  +   M +    P+  TY+ L
Sbjct: 273 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTL 332

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K GN+  A  + + MI  G  P+VV Y+ ++  L ++    +AH L+ K+  E+ 
Sbjct: 333 IDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDP 392

Query: 372 PPNTVTFN---------------TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            P+ + ++                 +KG C  G +  A K+   M       + + Y+ L
Sbjct: 393 VPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSIL 452

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  R   V++A     ++ + G   N  +  +++ G+   GMVVEA   +  +L    
Sbjct: 453 IHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 512

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLL 503
             DA     +I    K+G V+  I +L
Sbjct: 513 LADAEASKALIDLNRKEGNVDALIDVL 539



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 206/444 (46%), Gaps = 25/444 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +   ++G + +  +M  EG++     + ++++ Y +VG   ++L +F  + + G
Sbjct: 87  MVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRG 146

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +  ++ A            + + M+  G+  N  T+  L+   CK   +D A 
Sbjct: 147 LVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL 206

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
             + EM   G  P  V Y  +++  CKLG+++ AREL     A R    V  Y+ +I+G 
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   ++ AF L  +M+ +G+ P+ ITYS++I  LC+   +  +  +   M   G  P+ 
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G+   G   +A  L + MIR+G LP+VV YS LI+GL  +    EA  + ++
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+   Y AL+   +KA                    +VVA   ++K  C   +
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKAE-----------------FKSVVA---LLKGFCMKGL 426

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  + + M   N   +   ++  I G C  G V  A+    QM +    PN T+   
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 486

Query: 416 LLDGLLRVNRVKEAFELVTEIEKC 439
           L+ GL     V EA   + ++  C
Sbjct: 487 LVRGLFEEGMVVEADNAIQDLLTC 510



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 46/371 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM+  G+  +E  F ++I+ + + G  + AL     +R+ G++P+V  YN +++   
Sbjct: 173 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 232

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R  +   +   M+   ++P+V TY+ ++   CK   +D A++L  +M  KG  PDA+
Sbjct: 233 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +Y++                              LI GLC+E ++ +A  L   M+  G+
Sbjct: 293 TYSS------------------------------LIRGLCEEKRLNDACELFENMLQLGV 322

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+  TY+T+I   C  GNVE +L +  +M  +G  P++ +++ L+ G     RT EA  
Sbjct: 323 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 382

Query: 257 LWNRMIREGFLPNVVAYS---------------TLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L  ++  E  +P+ + Y                 L+ G C  G M EA  V   M + + 
Sbjct: 383 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 442

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
             + + YS LI G  + GN+  A     +M+ +G SPN  +   +V+ L +  M  +A +
Sbjct: 443 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADN 502

Query: 362 LIEKMAFENCP 372
            I+ +    CP
Sbjct: 503 AIQDL-LTCCP 512



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 23/321 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG    +D  + L+++M+ + V      + ++I+ Y +VG  + A ++  ++ + G+ P
Sbjct: 233 KLGR---MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 289

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               Y+ ++  L  E R +    ++ NM + G++P+ FTY  L+   CK   V+ A  L 
Sbjct: 290 DAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLH 349

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-------------- 169
            EM  KG  PD V+Y+ +++ + K  + +EA  L  +      V +              
Sbjct: 350 DEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA 409

Query: 170 ------ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
                 AL+ G C +  ++EA  +   M+DR    +   YS +I   C  GNV  +L   
Sbjct: 410 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFH 469

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            QM   G +PN  S  SL++G    G   EA +    ++    L +  A   LI      
Sbjct: 470 KQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKE 529

Query: 284 GSMDEAVSVSYQMEENSCPPN 304
           G++D  + V   M  +   P+
Sbjct: 530 GNVDALIDVLCGMARDGLLPS 550


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 271/525 (51%), Gaps = 6/525 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R+G+    +  ++R+   G++P + IYN +++AL  +   +    I   +    M P+ F
Sbjct: 192 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 251

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
           TY  ++   C+ + +D A ++  +M  +GC P+ V+Y+T+++ +C  G+V EA    RE+
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311

Query: 158 AMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            +             I  LC     E+A+ L  +M ++G +PNV TY+ +IS LC  G +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGIL 371

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++G+  +M   G  PN  ++ +L+   +   R   A  + N M R G  PN+V Y+ +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G   +A+ V   M +     N+ TY+ +I G+  +GN   A +I + M   GC
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+  +YT ++   C+ +    A  L  +M  +   PN VT+   I G C   ++D A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL+ MK+  C PN+ TYN L+ GL + N    A EL   + + GI  N+VTY  ++ G+C
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G    A ++  KM+ +G   + +T++ +I A  ++GKV  A  L   +   G   PD 
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG-LIPDE 670

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I+Y  ++     SG ++ AF +L +M+  G  P   T+ VL++ L
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 268/561 (47%), Gaps = 17/561 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K ++D    +  QM  EG   +   + ++IN     G   +A  +   +   G+ PT  
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
                + AL     +     ++ +MK  G EPNV+TY  L+  LC +  +  A  L   M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKI 181
              G  P+ V+Y  +++ + +  +++ A     L  R G    +  YN +I G C     
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A  ++  M+ RG   N++TY+TII   CD GN  ++L IL  M   GC P+  S+T L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G+    +   A  L+N M+ +G  PN V Y+ LI G C +  +D A S+   M+ + C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV TY+ LI G  K  N  GA ++   MI  G  PNVV YT M+  LC+N     A  
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +  KM  + C PN +T+++ I+ L   G+V+ A  L  +++++  +P+  TY ++++  +
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
              +V+ AF  +  + K G Q  + TY  ++ G            L  + L+   +L A+
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------------LKNEYLLADQRLAAL 729

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
              +   ++  Q    +A+ ++       +    +    +L+  +  +G   EA   L  
Sbjct: 730 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           M+++G+CP+   +N L+ SL 
Sbjct: 790 MISQGLCPDQEAYNSLLCSLL 810



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 215/433 (49%), Gaps = 6/433 (1%)

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++  + +LG      +   R  S GV     +YNA+IN LCK+  + +A  ++ ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  + P+  TY+++I   C   +++++L +  QM   GC PN  ++++L+ G    GR 
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           +EA DL   MI  G LP     +  I  LC  G  ++A  +   M+   C PNV TY+AL
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G   +G L  A  +++RM  +G  PN V Y  ++ +L +N     A  ++  M    C
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+N  IKG C  G    AM +++ M Q     N+ TYN ++ G         A  
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++  +   G + +  +Y  ++ G C+   +  AF L  +M+ +G   + +T+  +I  YC
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  K++ A  LL+ ++  G   P++ +Y  L+ G+        A    + M+ EGI PN 
Sbjct: 542 KDEKLDTATSLLEHMKRSG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 552 ATWNVLVRSLFSN 564
            T+  ++  L  N
Sbjct: 601 VTYTAMIDGLCKN 613



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 176/364 (48%), Gaps = 1/364 (0%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+   +  YS ++  L  +G     +    +M   G  PN+  + +++      G   +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             +  ++      P+   Y+++I G C    +D A+ V  QM +  C PN  TYS LI+G
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING 294

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
              +G +  A  +   MI +G  P     T  +  LC    +  A  L   M  + C PN
Sbjct: 295 LCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 354

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+   I GLC  G +  A+ L  +M +    PN  TYN L++ L+   R+K AF ++ 
Sbjct: 355 VYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            + + G   NIVTYN ++ G C  G   +A  ++  ML  G   + +T+N II  YC  G
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
              +A+++LD +R GG   PD  SYT L+ G C    M+ AF    +M+++G+CPN  T+
Sbjct: 475 NTTSALRILDLMRDGG-CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 555 NVLV 558
             L+
Sbjct: 534 TALI 537



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 235/565 (41%), Gaps = 54/565 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   I     +L  M   G S +   +  +I  Y  +G  ++A+ +   + + G
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +  YN I+         +    I   M+  G +P+ ++Y  L+   CK ++++ A+
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
            L  EM + G  P+ V+YT ++   CK  +++ A  L     R G    V  YN LI+GL
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K++    A  L   M++ GI PNV+TY+ +I  LC  G+   +L +  +M  +GC PN+
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL++     G+  EA +L+  + R G +P+ + Y  +I     +G ++ A +   +
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +  C P + TY  LI G  K   LL   ++          P+VV   C       +  
Sbjct: 696 MIKAGCQPTLWTYGVLIKGL-KNEYLLADQRL-------AALPDVVP-NCSFGYQTTD-- 744

Query: 356 FHQAHSLIEKMAFENCPPNTVTF-NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              A S++     E  P  +V   N  +  L   GR   A +LL  M      P+   YN
Sbjct: 745 -QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LL  LLRV  V  A  +   +   G ++++  Y  ++  +C+     EA      ML+ 
Sbjct: 804 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 863

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
                                                WNPD +    L+ G+   G    
Sbjct: 864 ------------------------------------TWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 535 AFIYLQKMLNEGICPNFATWNVLVR 559
              +L  M      P+F  + +L R
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTILAR 912



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 1/313 (0%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           + G    + AYS L+  L   G     +   ++M      PN+  Y+A+I+   K GN+ 
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 232

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  I  ++  +  SP+   YT M+   C+ +    A  +  +MA E C PNTVT++T I
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  GRV+ A  L+ +M  +  LP   T    +  L  +   ++A+ L  +++  G +
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N+ TY  ++ G+C +G++  A  L  +M  +G   + +T+N +I    +  ++  A  +
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           L+ + G    +P+I++Y  ++ G C  G  ++A + +  ML  G   N  T+N +++   
Sbjct: 413 LN-LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 563 SNLGHLGPVYILD 575
            +      + ILD
Sbjct: 472 DSGNTTSALRILD 484


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 271/525 (51%), Gaps = 6/525 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R+G+    +  ++R+   G++P + IYN +++AL  +   +    I   +    M P+ F
Sbjct: 192 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 251

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
           TY  ++   C+ + +D A ++  +M  +GC P+ V+Y+T+++ +C  G+V EA    RE+
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311

Query: 158 AMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            +             I  LC     E+A+ L  +M ++G +PNV TY+ +IS LC  G +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++G+  +M   G  PN  ++ +L+   +   R   A  + N M R G  PN+V Y+ +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G   +A+ V   M +     N+ TY+ +I G+  +GN   A +I + M   GC
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+  +YT ++   C+ +    A  L  +M  +   PN VT+   I G C   ++D A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL+ MK+  C PN+ TYN L+ GL + N    A EL   + + GI  N+VTY  ++ G+C
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G    A ++  KM+ +G   + +T++ +I A  ++GKV  A  L   +   G   PD 
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG-LIPDE 670

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I+Y  ++     SG ++ AF +L +M+  G  P   T+ VL++ L
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 268/561 (47%), Gaps = 17/561 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K ++D    +  QM  EG   +   + ++IN     G   +A  +   +   G+ PT  
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
                + AL     +     ++ +MK  G EPNV+TY  L+  LC +  +  A  L   M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKI 181
              G  P+ V+Y  +++ + +  +++ A     L  R G    +  YN +I G C     
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A  ++  M+ RG   N++TY+TII   CD GN  ++L IL  M   GC P+  S+T L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G+    +   A  L+N M+ +G  PN V Y+ LI G C +  +D A S+   M+ + C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV TY+ LI G  K  N  GA ++   MI  G  PNVV YT M+  LC+N     A  
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +  KM  + C PN +T+++ I+ L   G+V+ A  L  +++++  +P+  TY ++++  +
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
              +V+ AF  +  + K G Q  + TY  ++ G            L  + L+   +L A+
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------------LKNEYLLADQRLAAL 729

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
              +   ++  Q    +A+ ++       +    +    +L+  +  +G   EA   L  
Sbjct: 730 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           M+++G+CP+   +N L+ SL 
Sbjct: 790 MISQGLCPDQEAYNSLLCSLL 810



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 215/433 (49%), Gaps = 6/433 (1%)

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++  + +LG      +   R  S GV     +YNA+IN LCK+  + +A  ++ ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  + P+  TY+++I   C   +++++L +  QM   GC PN  ++++L+ G    GR 
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           +EA DL   MI  G LP     +  I  LC  G  ++A  +   M+   C PNV TY+AL
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G   +G L  A  +++RM  +G  PN V Y  ++ +L +N     A  ++  M    C
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+N  IKG C  G    AM +++ M Q     N+ TYN ++ G         A  
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++  +   G + +  +Y  ++ G C+   +  AF L  +M+ +G   + +T+  +I  YC
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  K++ A  LL+ ++  G   P++ +Y  L+ G+        A    + M+ EGI PN 
Sbjct: 542 KDEKLDTATSLLEHMKRSG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 552 ATWNVLVRSLFSN 564
            T+  ++  L  N
Sbjct: 601 VTYTAMIDGLCKN 613



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 176/364 (48%), Gaps = 1/364 (0%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+   +  YS ++  L  +G     +    +M   G  PN+  + +++      G   +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             +  ++      P+   Y+++I G C    +D A+ V  QM +  C PN  TYS LI+G
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING 294

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
              +G +  A  +   MI +G  P     T  +  LC    +  A  L   M  + C PN
Sbjct: 295 LCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 354

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+   I GLC  G +  A+ L  +M +    PN  TYN L++ L+   R+K AF ++ 
Sbjct: 355 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            + + G   NIVTYN ++ G C  G   +A  ++  ML  G   + +T+N II  YC  G
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
              +A+++LD +R GG   PD  SYT L+ G C    M+ AF    +M+++G+CPN  T+
Sbjct: 475 NTTSALRILDLMRDGG-CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 555 NVLV 558
             L+
Sbjct: 534 TALI 537



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 235/565 (41%), Gaps = 54/565 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   I     +L  M   G S +   +  +I  Y  +G  ++A+ +   + + G
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRG 455

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +  YN I+         +    I   M+  G +P+ ++Y  L+   CK ++++ A+
Sbjct: 456 HSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAF 515

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
            L  EM + G  P+ V+YT ++   CK  +++ A  L     R G    V  YN LI+GL
Sbjct: 516 GLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGL 575

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K++    A  L   M++ GI PNV+TY+ +I  LC  G+   +L +  +M  +GC PN+
Sbjct: 576 TKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNL 635

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL++     G+  EA +L+  + R G +P+ + Y  +I     +G ++ A +   +
Sbjct: 636 LTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGR 695

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +  C P + TY  LI G  K   LL   ++          P+VV   C       +  
Sbjct: 696 MIKAGCQPTLWTYGVLIKGL-KNEYLLADQRL-------AALPDVVP-NCSFGYQTTD-- 744

Query: 356 FHQAHSLIEKMAFENCPPNTVTF-NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              A S++     E  P  +V   N  +  L   GR   A +LL  M      P+   YN
Sbjct: 745 -QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYN 803

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LL  LLRV  V  A  +   +   G ++++  Y  ++  +C+     EA      ML+ 
Sbjct: 804 SLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMR 863

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
                                                WNPD +    L+ G+   G    
Sbjct: 864 ------------------------------------TWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 535 AFIYLQKMLNEGICPNFATWNVLVR 559
              +L  M      P+F  + +L R
Sbjct: 888 CMEFLHIMETRRYMPSFHIYTILAR 912



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 1/313 (0%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           + G    + AYS L+  L   G     +   ++M      PN+  Y+A+I+   K GN+ 
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 232

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  I  ++  +  SP+   YT M+   C+ +    A  +  +MA E C PNTVT++T I
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  GRV+ A  L+ +M  +  LP   T    +  L  +   ++A+ L  +++  G +
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N+ TY  ++ G+C +G++  A  L  +M  +G   + +T+N +I    +  ++  A  +
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           L+ + G    +P+I++Y  ++ G C  G  ++A + +  ML  G   N  T+N +++   
Sbjct: 413 LN-LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 563 SNLGHLGPVYILD 575
            +      + ILD
Sbjct: 472 DSGNTTSALRILD 484


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  268 bits (684), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 170/568 (29%), Positives = 278/568 (48%), Gaps = 10/568 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L +     G + +L  MK  G+  +   F+ V+ SY R G    ALK+   ++  G
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + I N  +D  +  NR          M+  G+ PNV TYN +++  C  +RV+ A 
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +LL +M +KGC PD VSY TI+  +CK  ++ E R+L  +      +      YN LI+ 
Sbjct: 336 ELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHM 395

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNP 233
           L K    +EA W L +  ++G   + + YS I+ +LC  G +  +  ++ +M  +G C P
Sbjct: 396 LTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 455

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++T+++ G+   G   +A  L   M   G+ PN V+Y+ L++GLC  G   EA  + 
Sbjct: 456 DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMM 515

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
              EE    PN  TYS L+ G  K G L  A  +   M+  G  P  V    +++ LC++
Sbjct: 516 NMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 575

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H+A   +E+   + C  N V F T I G C    +D A+ +LD M       ++ TY
Sbjct: 576 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 635

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+D L +  R+ EA EL+ ++   GI    VTY T++H  C+   V +   +L KM++
Sbjct: 636 TTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMIL 695

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
              K   I +N +I   C  GK+  A +LL ++      + D  +  +L+ G    G   
Sbjct: 696 R-QKCKTI-YNQVIEKLCGLGKLEEADKLLGKVLRTASRS-DAKTCYALMEGYLKIGVPL 752

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            A+    +M N  + P+      L + L
Sbjct: 753 LAYKVACRMFNRNLIPDVKMCEKLSKRL 780



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 242/468 (51%), Gaps = 10/468 (2%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-REL 157
           +   Y  +L+ L K     GA ++LV M  +G      ++  ++ S  + GQ+ +A + L
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 158 AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            +   +GV     + N  I+   + +++E+A   L  M   GI PNV+TY+ +I   CD+
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG-GRTHEASDLWNRMIRE-GFLPNVV 271
             VE ++ +L  M  +GC P+  S+ +++ GYL    R  E  DL  +M +E G + + V
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIM-GYLCKEKRIVEVRDLMKKMAKEHGLVRDQV 387

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TLIH L  +   DEA+      EE     +   YSA++    K G +  A  + N M
Sbjct: 388 TYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEM 447

Query: 332 ISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +S G C P+VV YT +V   C+     +A  L++ M      PNTV++   + GLC  G+
Sbjct: 448 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGK 507

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              A ++++  ++    PN  TY+ L+ GL +  ++ EA ++V E+   G     V  N 
Sbjct: 508 SLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINL 567

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L  +CR G   EA + + + L +G  ++ + F  +I+ +C+  +++ A+ +LD +    
Sbjct: 568 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 627

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + + D+ +YT+L+  +   G + EA   ++KML++GI P   T+  ++
Sbjct: 628 K-HADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVI 674



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 180/367 (49%), Gaps = 5/367 (1%)

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           DP V  Y +++  L      + +  +L  M  RG      +F  ++  Y   G+  +A  
Sbjct: 209 DPMV--YYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALK 266

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +   M R G  PN++  +T I        +++A+    +M+     PNV TY+ +I G+ 
Sbjct: 267 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 326

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNT 375
               +  A ++ + M S GC P+ V+Y  ++  LC+     +   L++KMA E+    + 
Sbjct: 327 DLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQ 386

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+NT I  L      D A+  L   ++     +   Y+ ++  L +  R+ EA +L+ E
Sbjct: 387 VTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINE 446

Query: 436 -IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            + K     ++VTY  +++G CR G V +A +LL  M   G K + +++  ++   C+ G
Sbjct: 447 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTG 506

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K   A ++++ +     W+P+ I+Y+ L+ G+   G + EA   +++M+ +G  P     
Sbjct: 507 KSLEAREMMN-MSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEI 565

Query: 555 NVLVRSL 561
           N+L++SL
Sbjct: 566 NLLLQSL 572



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 38/314 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D  + LLQ M   G   +   + +++N   R G + +A +M     E    P    Y+
Sbjct: 472 EVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYS 531

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E + S    +   M   G  P     N+LL++LC++ R   A K + E  NK
Sbjct: 532 VLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 591

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEA 184
           GCA + V++TT++   C+  +++ A  +      +   + V  Y  L++ L K+ +I EA
Sbjct: 592 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEA 651

Query: 185 FWLLCEMVDRGIDPNVITYSTII---------------------------------SSLC 211
             L+ +M+ +GIDP  +TY T+I                                   LC
Sbjct: 652 TELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTIYNQVIEKLC 711

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            +G +E +  +LG++       +  +  +L++GYL  G    A  +  RM     +P+V 
Sbjct: 712 GLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVK 771

Query: 272 AYSTLIHGLCSNGS 285
               L   L   G+
Sbjct: 772 MCEKLSKRLVVEGA 785


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 295/591 (49%), Gaps = 42/591 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D ++ +L++M V G   S  V + ++ S+ +    ++A  +   +R+F  +P    Y  
Sbjct: 149 LDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTT 208

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN-- 128
           ++ AL A NR   +  ++  M+  G E NV  +  L++   +  R+D A  LL EM +  
Sbjct: 209 LIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNS 268

Query: 129 ---------------------------------KGCAPDAVSYTTIVSSICKLGQVEEAR 155
                                            +G  PD V+YTT++  +CK  +++EA 
Sbjct: 269 FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAV 328

Query: 156 ELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           EL        SV     YN +I G     K +EA+ LL     +G  P+VI Y+ I++ L
Sbjct: 329 ELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCL 388

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
              G VE +L I  +M  +   PN+ ++  L+      G    A  + + M   G  PN+
Sbjct: 389 GRKGKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNI 447

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           +  + +I  LC    +DEA S+   ++   C P+  T+ +LIDG  + G +  A  ++ +
Sbjct: 448 MTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEK 507

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+ +   PNVV YT +++   +       H + ++M    C P+ +  N+++  +   G 
Sbjct: 508 MLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGE 567

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V+    L +++K    +P++ +Y+ L+ GL++    +E ++L  E+++ G+ L+++ YNT
Sbjct: 568 VEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNT 627

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G C++G V +A+QLL +M  +G +   +T+  ++    K  +++ A  L +  +  G
Sbjct: 628 VIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIG 687

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             + +++ Y+SL+ G    G + EA++ L++++ +G+ PN  TWN L+ +L
Sbjct: 688 -VDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDAL 737



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 285/565 (50%), Gaps = 5/565 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++     +  ID    LL +MK    +    ++   I+ + +VG  + A K F+ ++  G
Sbjct: 244 LVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQG 303

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++  L    R      ++  +  +   P V+ YN ++       + D AY
Sbjct: 304 LVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAY 363

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            LL     KGC P  ++Y  I++ + + G+VEEA     E+       ++ YN LI+ LC
Sbjct: 364 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLC 423

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  ++E A  +   M + G+ PN++T + +I  LC    ++ +  I   +  + C+P+  
Sbjct: 424 KAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSR 483

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F SL+ G    GR  +A  L+ +M+    +PNVV Y++LI      G  ++   +  +M
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEM 543

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
               C P++   ++ +D   KAG +     ++  + + G  P+V +Y+ ++  L +    
Sbjct: 544 VHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFS 603

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            + + L  +M  +    + + +NT I G C  G+VD A +LL++MK     P + TY  +
Sbjct: 604 RETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSV 663

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +  G+ LN+V Y++++ G  + G + EA+ +L +++ +G 
Sbjct: 664 VDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             ++ T+N ++ A  K  +++ A      ++   + +P+ ++Y+ ++ G+C      +AF
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMK-NLKCSPNAMTYSIMINGLCMIRKFNKAF 782

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
           ++ Q+M  +G+ PN  T+  ++  L
Sbjct: 783 VFWQEMQKQGLKPNNITYTTMIAGL 807



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 261/532 (49%), Gaps = 7/532 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  Y   G  ++A  +  R +  G  P+V  YN IL  L  + +      I+  M++D
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQD 407

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
              PN+ TYNIL+  LCK   ++ A K+   M   G  P+ ++   ++  +CK  +++EA
Sbjct: 408 AA-PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466

Query: 155 RELAMRFGSGV-----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             + +     V       + +LI+GL +  ++++A+ L  +M+D    PNV+ Y+++I +
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQN 526

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
               G  E    I  +M  RGC+P++    S +      G   +   L+  +  +G +P+
Sbjct: 527 FFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPD 586

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V +YS LIHGL   G   E   + Y+M+E     +V  Y+ +IDGF K+G +  A Q+  
Sbjct: 587 VRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLE 646

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M + G  P VV Y  +V  L + +   +A+ L E+        N V +++ I G    G
Sbjct: 647 EMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVG 706

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A  +L+++ Q    PN  T+N LLD L++   + EA      ++      N +TY+
Sbjct: 707 RIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYS 766

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++G+C      +AF    +M  +G K + IT+  +I    K G V  A  L DR +  
Sbjct: 767 IMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKAS 826

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G   PD   Y +++ G+ ++    +A+I  ++   +G   N  T  VL+ +L
Sbjct: 827 G-GVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL 877



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 243/532 (45%), Gaps = 41/532 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G   + D    LL++ K +G   S   +  ++    R G  E+AL++   +R+  
Sbjct: 349 MIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-D 407

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN ++D L           +   MK  G+ PN+ T NI++  LCK  ++D A 
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            + + + +K C+PD+ ++ +++  + + G+V++A  L  +         V VY +LI   
Sbjct: 468 SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  + E+   +  EMV RG  P+++  ++ +  +   G VE    +  ++  +G  P++
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDV 587

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S++ L+ G +  G + E   L+  M  +G   +V+AY+T+I G C +G +D+A  +  +
Sbjct: 588 RSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE 647

Query: 296 MEENSCPPNVTTY-----------------------------------SALIDGFAKAGN 320
           M+     P V TY                                   S+LIDGF K G 
Sbjct: 648 MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  I   ++  G +PN   + C++  L +     +A    + M    C PN +T++ 
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSI 767

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLC   + + A     +M++    PN  TY  ++ GL +   V EA  L    +  G
Sbjct: 768 MINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASG 827

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              +   YN ++ G+  A   ++A+ +  +  ++G ++++ T  +++ A  K
Sbjct: 828 GVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHK 879



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 202/420 (48%), Gaps = 6/420 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P  + +  ++D L    R      +Y  M      PNV  Y  L++   K  R +  +K+
Sbjct: 480 PDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI 539

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCK 177
             EM ++GC+PD +   + +  + K G+VE+ R L     A      V  Y+ LI+GL K
Sbjct: 540 YKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVK 599

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
                E + L  EM ++G+  +V+ Y+T+I   C  G V+ +  +L +M  +G  P + +
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + S++ G     R  EA  L+      G   NVV YS+LI G    G +DEA  +  ++ 
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELM 719

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    PN  T++ L+D   KA  +  A   +  M +  CSPN + Y+ M+  LC    F+
Sbjct: 720 QKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFN 779

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A    ++M  +   PN +T+ T I GL   G V  A  L D+ K    +P+   YN ++
Sbjct: 780 KAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMI 839

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +GL   N+  +A+ +  E    G ++N  T   +L  + +A  + +A  ++G +L E  K
Sbjct: 840 EGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA-AIVGAVLREMAK 898



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 197/403 (48%), Gaps = 2/403 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           FG    V   L+    K HK++EAF ++  M      P    Y+T+I +L      +  L
Sbjct: 164 FGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPML 223

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM   G   N+H FT+L++ +   GR   A  L + M    F  ++V Y+  I   
Sbjct: 224 TLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCF 283

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              G +D A    ++M+     P+  TY+ LI    KA  L  A +++  +  N   P V
Sbjct: 284 GKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCV 343

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
            AY  M+        F +A+SL+E+   + C P+ + +N  +  L   G+V+ A+++ D+
Sbjct: 344 YAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDE 403

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M+Q +  PN+TTYN L+D L +   ++ A ++   +++ G+  NI+T N ++  +C+A  
Sbjct: 404 MRQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQK 462

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + EA  +   +  +    D+ TF  +I    ++G+V++A  L +++    +  P+++ YT
Sbjct: 463 LDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQI-PNVVVYT 521

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           SL+      G  ++     ++M++ G  P+    N  +  +F 
Sbjct: 522 SLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFK 564



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 192/401 (47%), Gaps = 8/401 (1%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
            VYNA +  + +   ++    +L EM   G   +      +++S      ++ + G++  
Sbjct: 134 EVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEM 193

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M      P   ++T+L+       R      L+++M   G+  NV  ++TL+      G 
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D A+S+  +M+ NS   ++  Y+  ID F K G +  A + ++ M + G  P+ V YT 
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++ VLC+     +A  L E++      P    +NT I G    G+ D A  LL++ K+  
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C+P++  YN +L  L R  +V+EA  +  E+ +     N+ TYN ++  +C+AG +  A 
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLTTYNILIDMLCKAGELEAAL 432

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL---LDRIRGGGEWNPDIISYTSL 522
           ++   M   G   + +T NI+I   CK  K++ A  +   LD        +PD  ++ SL
Sbjct: 433 KVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDH----KVCSPDSRTFCSL 488

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + G+   G + +A+   +KML+    PN   +  L+++ F 
Sbjct: 489 IDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 273/549 (49%), Gaps = 17/549 (3%)

Query: 25  GVSCSEGVFISVINSYRRVGL--------AEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           G  C E  F S    YR +           + A+ +F  + +    P++  +N +L A+ 
Sbjct: 35  GSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA 94

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N+F ++  +   M+  G+  +++TY+I +   C+ +++  A  +L +M   G  PD V
Sbjct: 95  KMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIV 154

Query: 137 SYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + +++++  C   ++ +A  L      M +      +  LI+GL   +K  EA  L+ +M
Sbjct: 155 TLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQM 214

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V RG  P+++TY T+++ LC  G+++ +L +L +M       N+  F +++         
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A DL+  M  +G  PNVV Y++LI+ LC+ G   +A  +   M E    PNV T++AL
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ID F K G L+ A ++   MI     P+ + Y  ++   C +N   +A  + + M  ++C
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+NT I G C C RV+  ++L  +M Q   + N  TY  ++ G  +      A  
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++    +  +I+TY+ +LHG+C  G +  A  +   +     +L+   +N +I   C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K GKV  A  L   +       PD+++Y +++ G+C+   +QEA    +KM  +G  PN 
Sbjct: 515 KAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570

Query: 552 ATWNVLVRS 560
            T+N L+R+
Sbjct: 571 GTYNTLIRA 579



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 268/524 (51%), Gaps = 10/524 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +QM+  G+S     +   IN + R      AL +  ++ + G +P +   + +L+     
Sbjct: 107 EQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R S    +   M   G +P+ FT+  L+  L  +N+   A  L+ +M  +GC PD V+Y
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226

Query: 139 TTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T+V+ +CK G ++ A  L     A R  + V ++N +I+ LCK   +E A  L  EM  
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +GI PNV+TY+++I+ LC+ G    +  +L  M  +  NPN+ +F +L+  +   G+  E
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L   MI+    P+ + Y+ LI+G C +  +DEA  +   M    C PN+ TY+ LI+
Sbjct: 347 AEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLIN 406

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF K   +    +++  M   G   N V YT +++   Q      A  + ++M     P 
Sbjct: 407 GFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT 466

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + +T++  + GLC  G++D A+ +   +++ E   NI  YN +++G+ +  +V EA++L 
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +    I+ ++VTYNT++ G+C   ++ EA  L  KM  +GT  ++ T+N +I A  + 
Sbjct: 527 CSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
                + +L+  +R  G       S  SL+  + + G + ++F+
Sbjct: 584 CDRAASAELIKEMRSSGFVGD--ASTISLVTNMLHDGRLDKSFL 625



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 206/430 (47%), Gaps = 8/430 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  ++ + G +P +  Y  +++ L 
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   ++ NV  +N ++ +LCK   V+ A  L  EM  KG  P+ V
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y ++++ +C  G+  +A       L  +    V  +NALI+   KE K+ EA  L  EM
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP+ ITY+ +I+  C    ++ +  +   M  + C PNI ++ +L+ G+    R 
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +  +L+  M + G + N V Y+T+I G    G  D A  V  QM  N  P ++ TYS L
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G    G L  A  I+  +  +    N+  Y  M++ +C+     +A  L   ++ +  
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK-- 532

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ VT+NT I GLC    +  A  L  +MK+   LPN  TYN L+   LR      + E
Sbjct: 533 -PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE 591

Query: 432 LVTEIEKCGI 441
           L+ E+   G 
Sbjct: 592 LIKEMRSSGF 601



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 210/420 (50%), Gaps = 11/420 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       + +V+N   + G  + AL +  ++    +K  V I+N I+D+L 
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   +++ M+  G+ PNV TYN L+  LC   R   A +LL  M  K   P+ V
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++ +  K G++ EA +L               YN LING C  ++++EA  +   M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +   PN+ TY+T+I+  C    VE  + +  +M  RG   N  ++T++++G+   G  
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ +M+      +++ YS L+HGLCS G +D A+ +   ++++    N+  Y+ +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  KAG +    + W+   S    P+VV Y  M+  LC   +  +A  L  KM  +  
Sbjct: 510 IEGMCKAGKV---GEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566

Query: 372 PPNTVTFNTFIKG-LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            PN+ T+NT I+  L  C R   A +L+ +M+    + + +T + L+  +L   R+ ++F
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASA-ELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSF 624


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  267 bits (683), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 151/484 (31%), Positives = 268/484 (55%), Gaps = 6/484 (1%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N IL +L+  N F         M+   ++P++FT+NIL+   C    ++ A+ +L ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIE 182
             G  PD V+ TT++  +C  G+V EA       +A  F      Y  LINGLCK  +  
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  +L ++    + PNV+ Y+TII SLC    V  +  +  +M V+   P++ ++T+L+
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G L+ GR  EA  L+N+M+ +   P+V  ++ L+ GLC  G M +A +V   M +    
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            N+ TY++L+DG+        A+ ++N M   G +P+V +Y+ M+  LC+  M  +A +L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            ++M  ++  PNTVT+N+ I GL   GR+  A  L+++M       ++ TY+ LLD L +
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCK 426

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            ++V +A  L+T+I+  GIQ NI TY  ++ G+C+ G + +A  +   +LI+G  LD   
Sbjct: 427 NHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKM 486

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N+++   CK+G  + A+ L+ ++   G   PD ++Y +L+  +  +    +A   L++M
Sbjct: 487 YNVMVNGLCKEGLFDEALSLVSKMEDNG-CIPDAVTYETLVRALFENDKNDKAVKLLREM 545

Query: 543 LNEG 546
           + +G
Sbjct: 546 IVQG 549



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 232/465 (49%), Gaps = 9/465 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +QM+++ +      F  +IN +  +G    A  +  +I + G  P       ++  L   
Sbjct: 88  KQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLN 147

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +       + ++   G   +  +Y  L+  LCK      A ++L ++      P+ V Y
Sbjct: 148 GKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMY 207

Query: 139 TTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            TI+ S+CK   V  A +L       R    V  Y  LI G     +++EA  L  +M+ 
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           + I P+V T++ ++  LC  G ++ +  +L  M  +G + NI ++ SL+ GY L  + ++
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+ ++N M R G  P+V +YS +I+GLC    +DEAV++  +M   S  PN  TY++LID
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G +  A  + N M + G   +V+ Y+ ++  LC+N+   +A +LI K+  +   P
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP 447

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           N  T+   + GLC  GR+  A  +   +  K Y    ++  YN +++GL +     EA  
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHL--DVKMYNVMVNGLCKEGLFDEALS 505

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           LV+++E  G   + VTY T++  +       +A +LL +M+++G+
Sbjct: 506 LVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGS 550



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 194/400 (48%), Gaps = 36/400 (9%)

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +  ++ I+SSL  + +  T++    QM ++   P++ +F  L+  +   G  + A  +  
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           ++ + GF P+ V  +TLI GLC NG + EA+     +       +  +Y  LI+G  K G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A Q+  ++      PNVV Y  ++  LC++ +   A  L  +M  +   P+ VT+ 
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I G    GR+  A+ L +QM      P++ T+N L+DGL +   +K+A  ++  + K 
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ 303

Query: 440 GIQLNIVTYNTIL-----------------------------------HGVCRAGMVVEA 464
           G+  NIVTYN+++                                   +G+C+  MV EA
Sbjct: 304 GVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEA 363

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L  +M  +    + +T+N +I    K G++++A  L++ +   G+   D+I+Y+SLL 
Sbjct: 364 VNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQ-PADVITYSSLLD 422

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +C +  + +A   + K+ ++GI PN  T+ +LV  L  N
Sbjct: 423 ALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 160/300 (53%), Gaps = 5/300 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           VG  ++A+ +F ++    +KP V  +N ++D L  E        + + M + G++ N+ T
Sbjct: 252 VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVT 311

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           YN L+       + + A  +   M  +G  PD  SY+ +++ +CK   V+EA  L     
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           +         YN+LI+GL K  +I +A+ L+ EM +RG   +VITYS+++ +LC    V+
Sbjct: 372 SKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVD 431

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ ++ ++  +G  PNI+++T L+ G    GR  +A  ++  ++ +G+  +V  Y+ ++
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +GLC  G  DEA+S+  +ME+N C P+  TY  L+    +      A ++   MI  G +
Sbjct: 492 NGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSA 551



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 158/302 (52%), Gaps = 7/302 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM ++ +      F  +++   + G  ++A  +   + + G+   +  YN ++D   
Sbjct: 261 LFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYF 320

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    +++ M R G+ P+V +Y+I++  LCK   VD A  L  EM +K  AP+ V
Sbjct: 321 LVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTV 380

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  + K G++ +A +L          + V  Y++L++ LCK H++++A  L+ ++
Sbjct: 381 TYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKI 440

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            D+GI PN+ TY+ ++  LC  G ++ +  +   + ++G + ++  +  ++ G    G  
Sbjct: 441 KDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLF 500

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM--EENSCPPNVTTYS 309
            EA  L ++M   G +P+ V Y TL+  L  N   D+AV +  +M  + ++   N+++ S
Sbjct: 501 DEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNS 560

Query: 310 AL 311
            L
Sbjct: 561 ML 562



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 177/380 (46%), Gaps = 5/380 (1%)

Query: 203 YSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           Y+  + S  D  NV+ ++     +  +R     I  F  +L   +     H A     +M
Sbjct: 33  YTQPLPSFID--NVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQM 90

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +   P++  ++ LI+  C  G ++ A SV  ++ +    P+  T + LI G    G +
Sbjct: 91  ELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKV 150

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A    + +I+ G   + V+Y  ++  LC+      A  ++ K+      PN V +NT 
Sbjct: 151 REALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTI 210

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I  LC    V  A  L  +M      P++ TY  L+ G L V R+KEA  L  ++    I
Sbjct: 211 IDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNI 270

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + ++ T+N ++ G+C+ G + +A  +L  M+ +G   + +T+N ++  Y    + N A  
Sbjct: 271 KPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATF 330

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + + +   G   PD+ SY+ ++ G+C +  + EA    ++M ++ + PN  T+N L+  L
Sbjct: 331 VFNTMARRG-VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389

Query: 562 FSNLGHLGPVYILDDIMANK 581
               G +   + L + M N+
Sbjct: 390 LK-YGRISDAWDLVNEMHNR 408



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 119/220 (54%), Gaps = 5/220 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           ++   M   GV+     +  +IN   +  + ++A+ +F  +    + P    YN ++D L
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           L   R S    + + M   G   +V TY+ LL ALCKN++VD A  L+ ++ ++G  P+ 
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNI 449

Query: 136 VSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            +YT +V  +CK G++++A+      L   +   V +YN ++NGLCKE   +EA  L+ +
Sbjct: 450 YTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSK 509

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           M D G  P+ +TY T++ +L +    + ++ +L +M V+G
Sbjct: 510 MEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 137/270 (50%), Gaps = 5/270 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++ E+   + +L  M  +GV  +   + S+++ Y  V    +A  +F  +   G
Sbjct: 280 LVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRG 339

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V+ Y+ +++ L           ++  M    M PN  TYN L+  L K  R+  A+
Sbjct: 340 VTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAW 399

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L+ EM N+G   D ++Y++++ ++CK  QV++A  L  +         +  Y  L++GL
Sbjct: 400 DLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A  +  +++ +G   +V  Y+ +++ LC  G  + +L ++ +M   GC P+ 
Sbjct: 460 CKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDA 519

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            ++ +L++      +  +A  L   MI +G
Sbjct: 520 VTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 69/132 (52%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++D    L+ ++K +G+  +   +  +++   + G  + A  ++  +   G
Sbjct: 420 LLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKG 479

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               VK+YN +++ L  E  F     + S M+ +G  P+  TY  L++AL +N++ D A 
Sbjct: 480 YHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAV 539

Query: 121 KLLVEMGNKGCA 132
           KLL EM  +G A
Sbjct: 540 KLLREMIVQGSA 551


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 253/464 (54%), Gaps = 31/464 (6%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN +T+  +++ LC   R+  A ++L EM  KGCAP    Y  I+ + C+ G        
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGG------- 161

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
              F + V V  A                    M  +G   +    + +++++C+ G V+
Sbjct: 162 ---FRNSVRVLEA--------------------MHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++G+L ++   GC  +I S+ ++LKG  +  R  +  +L + M+R    PN+V ++TLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC NG  +    V  QM E+ C P++  Y+ +IDG  K G+L  A++I NRM S G  
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  ++K LC    + +A  L+ +M  ++CP + VTFN  +   C  G VD  ++L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+QM  + C+P++ TY  +++G  +   + EA  L+  +  CG + N V+Y  +L G+C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           AG  V+A +L+ +M+ +G   + +TFN +I   CK+G V  AI+LL ++   G  +PD+I
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLI 497

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SY++++ G+  +G  +EA   L  M+N+GI PN   ++ +  +L
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 270/509 (53%), Gaps = 8/509 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    +  ++  L    R +    +   M   G  P    Y+++L+A C++     + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV--YNALING 174
           ++L  M  KGC  D  +   ++++IC+ G V+EA    R+LA  FG    +  YNA++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKG 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC   +  +   L+ EMV     PN++T++T+I  LC  G  E    +L QM   GC P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I  + +++ G    G    A+++ NRM   G  PNVV Y+T++ GLCS     EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +  CP +  T++ L+D F + G +    ++  +M+S+GC P+V+ YT ++   C+  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +A  L++ M+   C PNTV++   +KGLC  GR   A +L+ QM Q  C PN  T+N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++ L +   V++A EL+ ++   G   ++++Y+T++ G+ +AG   EA +LL  M+ +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + I ++ I  A  ++G+VN  IQ+ D I+       D + Y +++  +C       
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIK-DTTIRSDAVLYNAVISSLCKRWETDR 584

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  +   M++ G  PN +T+ +L++ L S
Sbjct: 585 AIDFFAYMVSNGCMPNESTYTMLIKGLAS 613



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/532 (30%), Positives = 267/532 (50%), Gaps = 11/532 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  V+      G    AL++   +   G  P   +Y+ IL+A      F     +   M 
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KLG 149
             G   +    N++L A+C+   VD A  LL ++   GC  D VSY  ++  +C   + G
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233

Query: 150 QVEEARELAMRF--GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            VEE  +  +R      +  +N LI  LC+    E    +L +M + G  P++  Y+TII
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             +C  G++E +  IL +M   G  PN+  + ++LKG     R  EA +L + M ++   
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            + V ++ L+   C NG +D  + +  QM  + C P+V TY+ +I+GF K G +  A  +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              M S GC PN V+YT ++K LC    +  A  L+ +M  + CPPN VTFNT I  LC 
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G V+ A++LL QM    C P++ +Y+ ++DGL +  + +EA EL+  +   GI  N + 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y++I   + R G V +  Q+   +     + DA+ +N +I + CK+ + + AI     + 
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             G   P+  +YT L+ G+ + G  +EA    Q++L+E +C   A    L+R
Sbjct: 594 SNG-CMPNESTYTMLIKGLASEGLAKEA----QELLSE-LCSRGALRKHLMR 639



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 235/503 (46%), Gaps = 30/503 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M  +G +   G    V+N+    G  ++A+ +  ++  FG +  +  YN +L  L 
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  +   M R    PN+ T+N L+  LC+N   +  +++L +M   GC PD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y TI                              I+G+CKE  +E A  +L  M   G+
Sbjct: 288 MYATI------------------------------IDGICKEGHLEVANEILNRMPSYGL 317

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNV+ Y+T++  LC     + +  +L +MF + C  +  +F  L+  +   G      +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L  +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            AG  + A ++ ++MI  GC PN V +  ++  LC+  +  QA  L+++M    C P+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +++T I GL   G+ + A++LL+ M      PN   Y+ +   L R  RV +  ++   I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +   I+ + V YN ++  +C+      A      M+  G   +  T+ ++I     +G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 497 NNAIQLLDRIRGGGEWNPDIISY 519
             A +LL  +   G     ++ +
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH 640



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 189/358 (52%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ ++I+   + G  E A ++  R+  +GLKP V  YN +L 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + S M +     +  T+NIL+   C+N  VD   +LL +M + GC P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     S         Y  ++ GLC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G  PN +T++T+I+ LC  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G +++ + +   +++ +   +   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K      A   +  M+SNGC PN   YT ++K L    +  +A  L+ ++
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 206/423 (48%), Gaps = 30/423 (7%)

Query: 168 YNALINGLCKEHKIEE---------------AFWLLCEMVDRG--------------IDP 198
            +ALI  LC   +  E               A+  +     R               + P
Sbjct: 50  LSALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  T+  ++  LC  G +  +L +L +M  +GC P    +  +L+     G    +  + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +G   +    + +++ +C  G +DEAV +  ++    C  ++ +Y+A++ G   A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                  ++ + M+   C+PN+V +  ++  LC+N +F + H ++ +M+   C P+   +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            T I G+C  G ++ A ++L++M  Y   PN+  YN +L GL    R KEA EL++E+ +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
               L+ VT+N ++   C+ G+V    +LL +ML  G   D IT+  +I  +CK+G ++ 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ LL  +   G   P+ +SYT +L G+C++G   +A   + +M+ +G  PN  T+N L+
Sbjct: 410 AVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 559 RSL 561
             L
Sbjct: 469 NFL 471



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM   G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G  PN  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ EEA EL  +    G+S    +Y+++   L +E ++ +  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  I  + + Y+ +ISSLC     + ++     M   GC PN  ++T L+KG 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA +L + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V +N  + G C  G++  A +L   +      PN  T+  ++ GL    R+ +A E++ E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G       Y+ IL   CR+G    + ++L  M  +G  LD    N+++ A C+QG 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+ A+ LL ++   G    DI+SY ++L G+C +    +    + +M+     PN  T+N
Sbjct: 197 VDEAVGLLRKLAFFG-CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 556 VLVRSLFSN 564
            L+  L  N
Sbjct: 256 TLIGYLCRN 264



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 78/157 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  ++    LL+QM V G S     + +VI+   + G  E+AL++   +   G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IY+ I  AL  E R + +  ++ N+K   +  +   YN ++ +LCK    D A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
                M + GC P+  +YT ++  +   G  +EA+EL
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + +    LL  M  +G+S +  ++ S+  +  R G   + ++MF  I++  
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L            ++ M  +G  PN  TY +L+K L        A 
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621

Query: 121 KLLVEMGNKG 130
           +LL E+ ++G
Sbjct: 622 ELLSELCSRG 631


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 253/464 (54%), Gaps = 31/464 (6%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN +T+  +++ LC   R+  A ++L EM  KGCAP    Y  I+ + C+ G        
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGG------- 161

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
              F + V V  A                    M  +G   +    + +++++C+ G V+
Sbjct: 162 ---FRNSVRVLEA--------------------MHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++G+L ++   GC  +I S+ ++LKG  +  R  +  +L + M+R    PN+V ++TLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC NG  +    V  QM E+ C P++  Y+ +IDG  K G+L  A++I NRM S G  
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  ++K LC    + +A  L+ +M  ++CP + VTFN  +   C  G VD  ++L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+QM  + C+P++ TY  +++G  +   + EA  L+  +  CG + N V+Y  +L G+C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           AG  V+A +L+ +M+ +G   + +TFN +I   CK+G V  AI+LL ++   G  +PD+I
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLI 497

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SY++++ G+  +G  +EA   L  M+N+GI PN   ++ +  +L
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 270/509 (53%), Gaps = 8/509 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    +  ++  L    R +    +   M   G  P    Y+++L+A C++     + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV--YNALING 174
           ++L  M  KGC  D  +   ++++IC+ G V+EA    R+LA  FG    +  YNA++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKG 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC   +  +   L+ EMV     PN++T++T+I  LC  G  E    +L QM   GC P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I  + +++ G    G    A+++ NRM   G  PNVV Y+T++ GLCS     EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +  CP +  T++ L+D F + G +    ++  +M+S+GC P+V+ YT ++   C+  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +A  L++ M+   C PNTV++   +KGLC  GR   A +L+ QM Q  C PN  T+N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++ L +   V++A EL+ ++   G   ++++Y+T++ G+ +AG   EA +LL  M+ +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + I ++ I  A  ++G+VN  IQ+ D I+       D + Y +++  +C       
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIK-DTTIRSDAVLYNAVISSLCKRWETDR 584

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  +   M++ G  PN +T+ +L++ L S
Sbjct: 585 AIDFFAYMVSNGCMPNESTYTMLIKGLAS 613



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/532 (30%), Positives = 267/532 (50%), Gaps = 11/532 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  V+      G    AL++   +   G  P   +Y+ IL+A      F     +   M 
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KLG 149
             G   +    N++L A+C+   VD A  LL ++   GC  D VSY  ++  +C   + G
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233

Query: 150 QVEEARELAMRF--GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            VEE  +  +R      +  +N LI  LC+    E    +L +M + G  P++  Y+TII
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             +C  G++E +  IL +M   G  PN+  + ++LKG     R  EA +L + M ++   
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            + V ++ L+   C NG +D  + +  QM  + C P+V TY+ +I+GF K G +  A  +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              M S GC PN V+YT ++K LC    +  A  L+ +M  + CPPN VTFNT I  LC 
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G V+ A++LL QM    C P++ +Y+ ++DGL +  + +EA EL+  +   GI  N + 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y++I   + R G V +  Q+   +     + DA+ +N +I + CK+ + + AI     + 
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             G   P+  +YT L+ G+ + G  +EA    Q++L+E +C   A    L+R
Sbjct: 594 SNG-CMPNESTYTMLIKGLASEGLAKEA----QELLSE-LCSRGALRKHLMR 639



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 235/503 (46%), Gaps = 30/503 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M  +G +   G    V+N+    G  ++A+ +  ++  FG +  +  YN +L  L 
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  +   M R    PN+ T+N L+  LC+N   +  +++L +M   GC PD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y TI                              I+G+CKE  +E A  +L  M   G+
Sbjct: 288 MYATI------------------------------IDGICKEGHLEVANEILNRMPSYGL 317

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNV+ Y+T++  LC     + +  +L +MF + C  +  +F  L+  +   G      +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L  +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            AG  + A ++ ++MI  GC PN V +  ++  LC+  +  QA  L+++M    C P+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +++T I GL   G+ + A++LL+ M      PN   Y+ +   L R  RV +  ++   I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +   I+ + V YN ++  +C+      A      M+  G   +  T+ ++I     +G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 497 NNAIQLLDRIRGGGEWNPDIISY 519
             A +LL  +   G     ++ +
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH 640



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 189/358 (52%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ ++I+   + G  E A ++  R+  +GLKP V  YN +L 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + S M +     +  T+NIL+   C+N  VD   +LL +M + GC P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     S         Y  ++ GLC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G  PN +T++T+I+ LC  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G +++ + +   +++ +   +   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K      A   +  M+SNGC PN   YT ++K L    +  +A  L+ ++
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 206/423 (48%), Gaps = 30/423 (7%)

Query: 168 YNALINGLCKEHKIEE---------------AFWLLCEMVDRG--------------IDP 198
            +ALI  LC   +  E               A+  +     R               + P
Sbjct: 50  LSALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  T+  ++  LC  G +  +L +L +M  +GC P    +  +L+     G    +  + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +G   +    + +++ +C  G +DEAV +  ++    C  ++ +Y+A++ G   A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                  ++ + M+   C+PN+V +  ++  LC+N +F + H ++ +M+   C P+   +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            T I G+C  G ++ A ++L++M  Y   PN+  YN +L GL    R KEA EL++E+ +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
               L+ VT+N ++   C+ G+V    +LL +ML  G   D IT+  +I  +CK+G ++ 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ LL  +   G   P+ +SYT +L G+C++G   +A   + +M+ +G  PN  T+N L+
Sbjct: 410 AVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 559 RSL 561
             L
Sbjct: 469 NFL 471



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM   G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G  PN  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ EEA EL  +    G+S    +Y+++   L +E ++ +  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  I  + + Y+ +ISSLC     + ++     M   GC PN  ++T L+KG 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA +L + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V +N  + G C  G++  A +L   +      PN  T+  ++ GL    R+ +A E++ E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G       Y+ IL   CR+G    + ++L  M  +G  LD    N+++ A C+QG 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+ A+ LL ++   G    DI+SY ++L G+C +    +    + +M+     PN  T+N
Sbjct: 197 VDEAVGLLRKLAFFG-CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 556 VLVRSLFSN 564
            L+  L  N
Sbjct: 256 TLIGYLCRN 264



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 78/157 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  ++    LL+QM V G S     + +VI+   + G  E+AL++   +   G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IY+ I  AL  E R + +  ++ N+K   +  +   YN ++ +LCK    D A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
                M + GC P+  +YT ++  +   G  +EA+EL
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + +    LL  M  +G+S +  ++ S+  +  R G   + ++MF  I++  
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L            ++ M  +G  PN  TY +L+K L        A 
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621

Query: 121 KLLVEMGNKG 130
           +LL E+ ++G
Sbjct: 622 ELLSELCSRG 631


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 242/443 (54%), Gaps = 12/443 (2%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           +R+ G  P    YN +L  L    R S    +Y  M + G  P+V TYN LL   CK   
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNA 170
           +D A K+      +G  PD V+Y  +++  CK  +++EA+ +  R  S      V  YN+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETSLGILGQMFVR 229
           L+NGLCK  +++EA  L+   VD+G  PNVITYST+IS LC ++  V  +L + G +  +
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  P + ++  L+ G L   R +EA +L++ +++ G  P+ + Y+  I GLC  G +++A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           + +   M+E  C P+V +++A+I+G  K   +  A  + + M + GCSPN +++  ++  
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC---GRVDWAMKLLDQMKQYEC 406
            C+   + +A +  ++M      P  VT+N  + GLC     GR+  A+ L D M +   
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ TY+ L+DGL +  ++ +A  L+  +E  G   N+ TYN+++ G+C    V EA +
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALE 417

Query: 467 LLGKMLIEGTKLDAITFNIIIYA 489
           L   M+ +G   D IT+  II A
Sbjct: 418 LFVAMVEKGCVPDTITYGTIISA 440



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/444 (32%), Positives = 242/444 (54%), Gaps = 17/444 (3%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M++ G  PN  TYN LL  LC   R+  A  L   M   G +PD V+Y T++   CK+G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 151 VEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++EA ++   A++ G    V  YNALING CK  K++EA  +L  MV   + P+V+TY++
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 206 IISSLCDVGNVETSLGILGQMFV--RGCNPNIHSFTSLLKGYLLGGR-THEASDLWNRMI 262
           +++ LC  G V+ +     +M +  +G +PN+ ++++L+ G     R   EA  L+  ++
Sbjct: 121 LVNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVL 175

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G+ P V  Y+ LI GL     ++EA  +   + ++   P+  TY+  IDG  KAG + 
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  +   M   GC P+VV++  ++  LC+     +A  L+  M  + C PN ++FNT I
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN---RVKEAFELVTEIEKC 439
            G C  G+   AM    +M +    P + TYN L+DGL +     R+KEA  L   + + 
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   ++VTY+ ++ G+ +AG + +A +LLG M  +G   +  T+N +I   C   KV+ A
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEA 415

Query: 500 IQLLDRIRGGGEWNPDIISYTSLL 523
           ++L   +   G   PD I+Y +++
Sbjct: 416 LELFVAMVEKG-CVPDTITYGTII 438



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 222/400 (55%), Gaps = 12/400 (3%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YNAL++GLC   ++ +A  L   M+  G  P+V+TY+T++   C VG ++ +L I     
Sbjct: 13  YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            RG  P++ ++ +L+ G+    +  EA  +  RM+ E  +P+VV Y++L++GLC NG +D
Sbjct: 73  KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ---IWNRMISNGCSPNVVAYT 344
           EA  +   + +    PNV TYS LI G  +   L G S+   ++  ++  G  P V  Y 
Sbjct: 133 EARML---IVDKGFSPNVITYSTLISGLCR--ELRGVSEALKLFGSVLKQGYEPEVPTYN 187

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  L + +  ++A  L   +      P+ +T+  FI GLC  GRV+ A+ +L  M + 
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C+P++ ++N +++GL +  RV EA  L++ +E  G   N +++NT++ G CRAG   +A
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 307

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCK---QGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
                +ML  G K   +T+NI++   CK   +G++  AI L D +   G   PD+++Y++
Sbjct: 308 MTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV-PDVVTYSA 366

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L+ G+  +G + +A   L  M  +G  PN  T+N L+  L
Sbjct: 367 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 406



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/415 (33%), Positives = 223/415 (53%), Gaps = 18/415 (4%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q L ++M   G S     + ++++ + +VG  ++ALK+F    + G  P V  YN +++ 
Sbjct: 30  QALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALING 89

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
               ++      I   M  + + P+V TYN L+  LCKN RVD A  L+V   +KG +P+
Sbjct: 90  FCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPN 146

Query: 135 AVSYTTIVSSICK-LGQVEEARELAMRFGS--------GVSVYNALINGLCKEHKIEEAF 185
            ++Y+T++S +C+ L  V EA +L   FGS         V  YN LI+GL KE ++ EAF
Sbjct: 147 VITYSTLISGLCRELRGVSEALKL---FGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAF 203

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L   +V  G++P+ ITY+  I  LC  G VE +L +L  M  +GC P++ S  +++ G 
Sbjct: 204 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               R  EA  L + M  +G  PN ++++TLI G C  G   +A++   +M +    P V
Sbjct: 264 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 323

Query: 306 TTYSALIDGFAKA---GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            TY+ L+DG  KA   G +  A  +++ MI  G  P+VV Y+ ++  L +      A  L
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 383

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +  M  + C PN  T+N+ I GLCG  +VD A++L   M +  C+P+  TY  ++
Sbjct: 384 LGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 233/444 (52%), Gaps = 13/444 (2%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHK 180
           M   G  P+ ++Y  ++S +C  G++ +A+ L  R     +   V  YN L++G CK  +
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA  +    V RG  P+V+TY+ +I+  C    ++ +  IL +M      P++ ++ S
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN-GSMDEAVSVSYQMEEN 299
           L+ G    GR  EA  L   ++ +GF PNV+ YSTLI GLC     + EA+ +   + + 
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P V TY+ LIDG  K   +  A ++++ ++ +G  P+ + YT  +  LC+      A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             +++ M  + C P+ V+ N  I GLC   RVD A  LL  M+   C PN  ++N L+ G
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 297

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA---GMVVEAFQLLGKMLIEGT 476
             R  + K+A     E+ K G++  +VTYN ++ G+C+A   G + EA  L   M+ +G 
Sbjct: 298 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 357

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D +T++ +I    K GK+++A +LL  +   G   P++ +Y SL+ G+C    + EA 
Sbjct: 358 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG-CIPNVYTYNSLISGLCGLEKVDEAL 416

Query: 537 IYLQKMLNEGICPNFATWNVLVRS 560
                M+ +G  P+  T+  ++ +
Sbjct: 417 ELFVAMVEKGCVPDTITYGTIISA 440



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/330 (37%), Positives = 190/330 (57%), Gaps = 5/330 (1%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN  ++ +LL G   GGR  +A  L+ RMI+ G+ P+VV Y+TL+HG C  G +DEA+ +
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
                +    P+V TY+ALI+GF KA  L  A +I  RM+S    P+VV Y  +V  LC+
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR-VDWAMKLLDQMKQYECLPNIT 411
           N    +A  LI    F    PN +T++T I GLC   R V  A+KL   + +    P + 
Sbjct: 128 NGRVDEARMLIVDKGFS---PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L+DGLL+ +RV EAFEL + + K G++ + +TY   + G+C+AG V +A  +L  M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
             +G   D ++ N +I   CK+ +V+ A  LL  +   G  +P+ IS+ +L+ G C +G 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG-CSPNAISFNTLICGQCRAGK 303

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            ++A    ++ML  G+ P   T+N+LV  L
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGL 333



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 212/415 (51%), Gaps = 6/415 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G    A  ++ R+ + G  P V  YN +L              I+    + G  P+V TY
Sbjct: 24  GRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTY 83

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--F 161
           N L+   CK +++D A ++L  M ++   PD V+Y ++V+ +CK G+V+EAR L +   F
Sbjct: 84  NALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGF 143

Query: 162 GSGVSVYNALINGLCKEHK-IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
              V  Y+ LI+GLC+E + + EA  L   ++ +G +P V TY+ +I  L     V  + 
Sbjct: 144 SPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAF 203

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +   +   G  P+  ++T  + G    GR  +A  +   M  +G +P+VV+++ +I+GL
Sbjct: 204 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 263

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    +DEA  +   ME   C PN  +++ LI G  +AG    A   +  M+  G  P V
Sbjct: 264 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 323

Query: 341 VAYTCMVKVLC---QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           V Y  +V  LC   Q     +A +L + M  +   P+ VT++  I GL   G++D A +L
Sbjct: 324 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 383

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           L  M+   C+PN+ TYN L+ GL  + +V EA EL   + + G   + +TY TI+
Sbjct: 384 LGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 33/212 (15%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  +D  + LL  M+ +G S +   F ++I    R G  ++A+  F  + + G
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318

Query: 61  LKPTVKIYNHILDALLA---ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           +KPTV  YN ++D L     E R      ++  M   G  P+V TY+ L+  L K  ++D
Sbjct: 319 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 378

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCK 177
            A +LL  M  KGC P+  +Y +++S +C L                             
Sbjct: 379 DARRLLGAMEAKGCIPNVYTYNSLISGLCGL----------------------------- 409

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             K++EA  L   MV++G  P+ ITY TIIS+
Sbjct: 410 -EKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 76/129 (58%), Gaps = 1/129 (0%)

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + K G   N +TYN +L G+C  G + +A  L  +M+  G   D +T+N +++ +CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           ++ A+++ D     G + PD+++Y +L+ G C +  + EA   LQ+M++E + P+  T+N
Sbjct: 61  LDEALKIFDGAVKRG-FVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119

Query: 556 VLVRSLFSN 564
            LV  L  N
Sbjct: 120 SLVNGLCKN 128


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 271/525 (51%), Gaps = 6/525 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R+G+    +  ++R+   G++P + IYN +++AL  +   +    I   +    M P+ F
Sbjct: 192 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 251

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
           TY  ++   C+ + +D A ++  +M  +GC P+ V+Y+T+++ +C  G+V EA    RE+
Sbjct: 252 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311

Query: 158 AMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            +             I  LC     E+A+ L  +M ++G +PNV TY+ +IS LC  G +
Sbjct: 312 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 371

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++G+  +M   G  PN  ++ +L+   +   R   A  + N M R G  PN+V Y+ +
Sbjct: 372 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEM 431

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G   +A+ V   M +     N+ TY+ +I G+  +GN   A +I + M   GC
Sbjct: 432 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 491

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+  +YT ++   C+ +    A  L  +M  +   PN VT+   I G C   ++D A  
Sbjct: 492 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 551

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL+ MK+  C PN+ TYN L+ GL + N    A EL   + + GI  N+VTY  ++ G+C
Sbjct: 552 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 611

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G    A ++  KM+ +G   + +T++ +I A  ++GKV  A  L   +   G   PD 
Sbjct: 612 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG-LIPDE 670

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I+Y  ++     SG ++ AF +L +M+  G  P   T+ VL++ L
Sbjct: 671 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 267/561 (47%), Gaps = 17/561 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K ++D    +  QM  EG   +   + ++IN     G   +A  +   +   G+ PT  
Sbjct: 262 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 321

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
                + AL     +     ++ +MK  G EPNV+TY  L+  LC +  +  A  L   M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKI 181
              G  P+ V+Y  +++ + +  +++ A  +    G       +  YN +I G C     
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A  ++  M+ RG   N++TY+TII   CD GN  ++L IL  M   GC P+  S+T L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G+    +   A  L+N M+ +G  PN V Y+ LI G C +  +D A S+   M+ + C
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV TY+ LI G  K  N  GA ++   MI  G  PNVV YT M+  LC+N     A  
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +  KM  + C PN +T+++ I+ L   G+V+ A  L  +++++  +P+  TY ++++  +
Sbjct: 622 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 681

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
              +V+ AF  +  + K G Q  + TY  ++ G            L  + L+   +L A+
Sbjct: 682 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------------LKNEYLLADQRLAAL 729

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
              +   ++  Q    +A+ ++       +    +    +L+  +  +G   EA   L  
Sbjct: 730 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 789

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           M+++G+CP+   +N L+ SL 
Sbjct: 790 MISQGLCPDQEAYNSLLCSLL 810



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 215/433 (49%), Gaps = 6/433 (1%)

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++  + +LG      +   R  S GV     +YNA+IN LCK+  + +A  ++ ++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  + P+  TY+++I   C   +++++L +  QM   GC PN  ++++L+ G    GR 
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           +EA DL   MI  G LP     +  I  LC  G  ++A  +   M+   C PNV TY+AL
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G   +G L  A  +++RM  +G  PN V Y  ++ +L +N     A  ++  M    C
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+N  IKG C  G    AM +++ M Q     N+ TYN ++ G         A  
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 481

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++  +   G + +  +Y  ++ G C+   +  AF L  +M+ +G   + +T+  +I  YC
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  K++ A  LL+ ++  G   P++ +Y  L+ G+        A    + M+ EGI PN 
Sbjct: 542 KDEKLDTATSLLEHMKRSG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNV 600

Query: 552 ATWNVLVRSLFSN 564
            T+  ++  L  N
Sbjct: 601 VTYTAMIDGLCKN 613



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 176/364 (48%), Gaps = 1/364 (0%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+   +  YS ++  L  +G     +    +M   G  PN+  + +++      G   +A
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADA 234

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             +  ++      P+   Y+++I G C    +D A+ V  QM +  C PN  TYS LI+G
Sbjct: 235 ETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLING 294

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
              +G +  A  +   MI +G  P     T  +  LC    +  A  L   M  + C PN
Sbjct: 295 LCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPN 354

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+   I GLC  G +  A+ L  +M +    PN  TYN L++ L+   R+K AF ++ 
Sbjct: 355 VYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLN 414

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            + + G   NIVTYN ++ G C  G   +A  ++  ML  G   + +T+N II  YC  G
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
              +A+++LD +R GG   PD  SYT L+ G C    M+ AF    +M+++G+CPN  T+
Sbjct: 475 NTTSALRILDLMRDGG-CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 555 NVLV 558
             L+
Sbjct: 534 TALI 537



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 157/642 (24%), Positives = 242/642 (37%), Gaps = 135/642 (21%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+++M + G+  +       I +   +G  E A ++F  ++  G +P V  Y  ++  L 
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   ++  M RDG+ PN  TYN L+  L +N R+  A+ +L  MG  GC+P+ V
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 137 SYTTIVSSICKLGQVEEA------------------------------------RELAMR 160
           +Y  ++   C LG  ++A                                    R L + 
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              G       Y  LI G CK  K+E AF L  EMVD G+ PN +TY+ +I   C    +
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +T+  +L  M   GC PN+ ++  L+ G         A +L   MI EG  PNVV Y+ +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-------- 328
           I GLC NGS   A+ +  +M E  C PN+ TYS+LI    + G +  A  ++        
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 329 ---------------------------NRMISNGCSPNVVAYTCMVKVLCQNNMF----- 356
                                       RMI  GC P +  Y  ++K L    +      
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRL 726

Query: 357 ------------------HQAHSLIEKMAFENCPPNTVTF-NTFIKGLCGCGRVDWAMKL 397
                               A S++     E  P  +V   N  +  L   GR   A +L
Sbjct: 727 AALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANEL 786

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L  M      P+   YN LL  LLRV  V  A  +   +   G ++++  Y  ++  +C+
Sbjct: 787 LGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQ 846

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
                EA      ML+                                      WNPD +
Sbjct: 847 LHRRKEARITFENMLMR------------------------------------TWNPDDV 870

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
               L+ G+   G       +L  M      P+F  + +L R
Sbjct: 871 VQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 191/451 (42%), Gaps = 29/451 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L  M+  G    E  +  +I  + ++   E A  +F  + + GL P    Y  ++D   
Sbjct: 482 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 541

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      +  +MKR G  PNV TYN+L+  L K N   GA +L   M  +G  P+ V
Sbjct: 542 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVV 601

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +CK G    A E+  +         +  Y++LI  L +E K+EEA  L  E+
Sbjct: 602 TYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL 661

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG----YLL 247
              G+ P+ ITY  +I +    G VE +   LG+M   GC P + ++  L+KG    YLL
Sbjct: 662 ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLL 721

Query: 248 GGRT--------------HEASDLWNRMIREGFLP------NVVAYSTLIHGLCSNGSMD 287
             +               ++ +D     +    L       +V   + L+  L + G   
Sbjct: 722 ADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWF 781

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA  +   M      P+   Y++L+    +  N+  A  ++  M + GC  ++  Y  ++
Sbjct: 782 EANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELI 841

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LCQ +   +A    E M      P+ V     I GL   G  D  M+ L  M+    +
Sbjct: 842 CALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYM 901

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           P+   Y  L     +    K     +T++++
Sbjct: 902 PSFHIYTILAREASKKRSWKHVAGCITKVKR 932



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 1/313 (0%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           + G    + AYS L+  L   G     +   ++M      PN+  Y+A+I+   K GN+ 
Sbjct: 173 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 232

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  I  ++  +  SP+   YT M+   C+ +    A  +  +MA E C PNTVT++T I
Sbjct: 233 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 292

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  GRV+ A  L+ +M  +  LP   T    +  L  +   ++A+ L  +++  G +
Sbjct: 293 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 352

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N+ TY  ++ G+C +G++  A  L  +M  +G   + +T+N +I    +  ++  A  +
Sbjct: 353 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 412

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           L+ + G    +P+I++Y  ++ G C  G  ++A + +  ML  G   N  T+N +++   
Sbjct: 413 LN-LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471

Query: 563 SNLGHLGPVYILD 575
            +      + ILD
Sbjct: 472 DSGNTTSALRILD 484



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 161/374 (43%), Gaps = 38/374 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++    G + L + M  EG+  +   + ++I+   + G    AL+MF ++ E G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  Y+ ++ AL  E +      +++ ++R G+ P+  TY  +++A   + +V+ A+
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSI--------------------CKLG---------QV 151
             L  M   GC P   +Y  ++  +                    C  G          V
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 750

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             A+   +  G  V V NAL++ L    +  EA  LL  M+ +G+ P+   Y++++ SL 
Sbjct: 751 MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 810

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            V NV+ ++G+   M  +GC  +++ +  L+       R  EA   +  M+   + P+ V
Sbjct: 811 RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 870

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
             + LI GL  +G  D  +   + ME     P+   Y+ L    +K        + W  +
Sbjct: 871 VQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK-------KRSWKHV 923

Query: 332 ISNGCSPNVVAYTC 345
              GC   V   TC
Sbjct: 924 A--GCITKVKRATC 935


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 253/464 (54%), Gaps = 31/464 (6%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN +T+  +++ LC   R+  A ++L EM  KGCAP    Y  I+ + C+ G        
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGG------- 161

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
              F + V V  A                    M  +G   +    + +++++C+ G V+
Sbjct: 162 ---FRNSVRVLEA--------------------MHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++G+L ++   GC  +I S+ ++LKG  +  R  +  +L + M+R    PN+V ++TLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC NG  +    V  QM E+ C P++  Y+ +IDG  K G+L  A++I NRM S G  
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  ++K LC    + +A  L+ +M  ++CP + VTFN  +   C  G VD  ++L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+QM  + C+P++ TY  +++G  +   + EA  L+  +  CG + N V+Y  +L G+C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           AG  V+A +L+ +M+ +G   + +TFN +I   CK+G V  AI+LL ++   G  +PD+I
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLI 497

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SY++++ G+  +G  +EA   L  M+N+GI PN   ++ +  +L
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 270/509 (53%), Gaps = 8/509 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    +  ++  L    R +    +   M   G  P    Y+++L+A C++     + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV--YNALING 174
           ++L  M  KGC  D  +   ++++IC+ G V+EA    R+LA  FG    +  YNA++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKG 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC   +  +   L+ EMV     PN++T++T+I  LC  G  E    +L QM   GC P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I  + +++ G    G    A+++ NRM   G  PNVV Y+T++ GLCS     EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +  CP +  T++ L+D F + G +    ++  +M+S+GC P+V+ YT ++   C+  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +A  L++ M+   C PNTV++   +KGLC  GR   A +L+ QM Q  C PN  T+N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++ L +   V++A EL+ ++   G   ++++Y+T++ G+ +AG   EA +LL  M+ +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + I ++ I  A  ++G+VN  IQ+ D I+       D + Y +++  +C       
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIK-DTTIRSDAVLYNAVISSLCKRWETDR 584

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  +   M++ G  PN +T+ +L++ L S
Sbjct: 585 AIDFFAYMVSNGCMPNESTYTMLIKGLAS 613



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/520 (30%), Positives = 260/520 (50%), Gaps = 6/520 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  V+      G    AL++   +   G  P   +Y+ IL+A      F     +   M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KL 148
              G   +    N++L A+C+   VD A  LL ++   GC  D VSY  ++  +C   + 
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 149 GQVEEARELAMRF--GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           G VEE  +  +R      +  +N LI  LC+    E    +L +M + G  P++  Y+TI
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATI 292

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  +C  G++E +  IL +M   G  PN+  + ++LKG     R  EA +L + M ++  
Sbjct: 293 IDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC 352

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             + V ++ L+   C NG +D  + +  QM  + C P+V TY+ +I+GF K G +  A  
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M S GC PN V+YT ++K LC    +  A  L+ +M  + CPPN VTFNT I  LC
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G V+ A++LL QM    C P++ +Y+ ++DGL +  + +EA EL+  +   GI  N +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y++I   + R G V +  Q+   +     + DA+ +N +I + CK+ + + AI     +
Sbjct: 533 IYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
              G   P+  +YT L+ G+ + G  +EA   L ++ + G
Sbjct: 593 VSNG-CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 239/512 (46%), Gaps = 34/512 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M  +G +   G    V+N+    G  ++A+ +  ++  FG +  +  YN +L  L 
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  +   M R    PN+ T+N L+  LC+N   +  +++L +M   GC PD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y TI                              I+G+CKE  +E A  +L  M   G+
Sbjct: 288 MYATI------------------------------IDGICKEGHLEVANEILNRMPSYGL 317

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNV+ Y+T++  LC     + +  +L +MF + C  +  +F  L+  +   G      +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L  +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            AG  + A ++ ++MI  GC PN V +  ++  LC+  +  QA  L+++M    C P+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +++T I GL   G+ + A++LL+ M      PN   Y+ +   L R  RV +  ++   I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +   I+ + V YN ++  +C+      A      M+  G   +  T+ ++I     +G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             A +LL  +   G     ++ +    +GI N
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH----FGISN 645



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 189/358 (52%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ ++I+   + G  E A ++  R+  +GLKP V  YN +L 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + S M +     +  T+NIL+   C+N  VD   +LL +M + GC P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     S         Y  ++ GLC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G  PN +T++T+I+ LC  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G +++ + +   +++ +   +   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K      A   +  M+SNGC PN   YT ++K L    +  +A  L+ ++
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 206/423 (48%), Gaps = 30/423 (7%)

Query: 168 YNALINGLCKEHKIEE---------------AFWLLCEMVDRG--------------IDP 198
            +ALI  LC   +  E               A+  +     R               + P
Sbjct: 50  LSALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  T+  ++  LC  G +  +L +L +M  +GC P    +  +L+     G    +  + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +G   +    + +++ +C  G +DEAV +  ++    C  ++ +Y+A++ G   A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                  ++ + M+   C+PN+V +  ++  LC+N +F + H ++ +M+   C P+   +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            T I G+C  G ++ A ++L++M  Y   PN+  YN +L GL    R KEA EL++E+ +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
               L+ VT+N ++   C+ G+V    +LL +ML  G   D IT+  +I  +CK+G ++ 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ LL  +   G   P+ +SYT +L G+C++G   +A   + +M+ +G  PN  T+N L+
Sbjct: 410 AVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 559 RSL 561
             L
Sbjct: 469 NFL 471



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM   G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G  PN  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ EEA EL  +    G+S    +Y+++   L +E ++ +  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  I  + + Y+ +ISSLC     + ++     M   GC PN  ++T L+KG 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA +L + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V +N  + G C  G++  A +L   +      PN  T+  ++ GL    R+ +A E++ E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G       Y+ IL   CR+G    + ++L  M  +G  LD    N+++ A C+QG 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+ A+ LL ++   G    DI+SY ++L G+C +    +    + +M+     PN  T+N
Sbjct: 197 VDEAVGLLRKLAFFG-CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 556 VLVRSLFSN 564
            L+  L  N
Sbjct: 256 TLIGYLCRN 264



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 78/157 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  ++    LL+QM V G S     + +VI+   + G  E+AL++   +   G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IY+ I  AL  E R + +  ++ N+K   +  +   YN ++ +LCK    D A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
                M + GC P+  +YT ++  +   G  +EA+EL
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + +    LL  M  +G+S +  ++ S+  +  R G   + ++MF  I++  
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L            ++ M  +G  PN  TY +L+K L        A 
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621

Query: 121 KLLVEMGNKG 130
           +LL E+ ++G
Sbjct: 622 ELLSELCSRG 631


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 270/527 (51%), Gaps = 30/527 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P+V  YN +L AL ++         + +M  DG+ PNV+TYNIL++ALC       A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFG---SGVSVYNALING 174
             +L +M   GC P+AV+Y T+V++ C+ G+V+ A  L   MR G     +  +N+++NG
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +CK  ++E+A  +  EMV  G+ P+ ++Y+T++   C VG    +L +  +M  +G  P+
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +FTSL+      G    A  L   M   G   N + ++ LI G C  G +D+A+    
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +    P+V  Y+ALI+G+   G +  A ++   M + G  P+VV Y+ ++   C+N 
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             H A  L ++M      P+ +T+++ I+ LC   R+  A  L   M      P+  TY 
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   V+ A  L  E+ K G+  ++VTY+ +++G+ ++    EA +LL K+  E
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536

Query: 475 -----GTKLDAI----------TFNIIIYAYCKQGKVNNAIQ----LLDRIRGGGEWNPD 515
                  K DA+          +   ++  +C +G +N A +    +LDR      WN D
Sbjct: 537 EPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDR-----NWNLD 591

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              Y+ L+ G C  G + +A  + ++ML  G  PN  +   L+R LF
Sbjct: 592 GSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLF 638



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 256/516 (49%), Gaps = 46/516 (8%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  ++AL +   +R  G  P    YN ++ A            +   M+  G++PN+ T+
Sbjct: 171 GHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTF 230

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           N ++  +CK  R++ A K+  EM  +G APD VSY T+V   CK+G              
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVG-------------- 276

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
                       C      EA  +  EM  +GI P+V+T++++I  +C  GN+E ++G++
Sbjct: 277 ------------CS----HEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M  RG   N  +FT+L+ G+   G   +A      M +    P+VV Y+ LI+G C  
Sbjct: 321 REMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMV 380

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G MDEA  +  +ME     P+V TYS ++  + K G+   A Q+  +M+ NG  P+ + Y
Sbjct: 381 GRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY 440

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           + +++VLC+      AH L + M      P+ VT+ + I G C  G V+ A+ L D+M +
Sbjct: 441 SSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK 500

Query: 404 YECLPNITTYNELLDGLLRVNRVKEA----FELVTE-----------IEKCGIQLNIVTY 448
              LP++ TY+ L++GL +  R KEA    F+L  E           + +C     + + 
Sbjct: 501 AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSV 560

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             +L G C  G++ EA ++   +L     LD   ++++I+ +C++G V  A+    ++  
Sbjct: 561 LALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            G + P+  S  SL+ G+   G + EA   +Q++LN
Sbjct: 621 CG-FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLN 655



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 251/507 (49%), Gaps = 20/507 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M+  G   +   + +++ ++ R G  ++A ++   +RE GLKP +  +N +++ + 
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      ++  M ++G+ P+  +YN L+   CK      A  +  EM  KG  PD V
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++T+++  +CK G +E A    RE+  R        + ALI+G CK+  +++A   + EM
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               I P+V+ Y+ +I+  C VG ++ +  ++ +M  +G  P++ +++++L  Y   G T
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H A  L  +M+  G LP+ + YS+LI  LC    + +A  +   M      P+  TY++L
Sbjct: 419 HSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSL 478

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K GN+  A  + + M+  G  P+VV Y+ ++  L ++    +A  L+ K+  E  
Sbjct: 479 IDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP 538

Query: 372 PPNTVTFN---------------TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            P  + ++                 +KG C  G ++ A K+   +       + + Y+ L
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVL 598

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  R   V +A     ++ +CG   N  +  +++ G+   GMVVEA Q++ ++L   +
Sbjct: 599 IHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCS 658

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLL 503
             DA     +I    K+G V+  + +L
Sbjct: 659 LADAEASKALIDLNLKEGNVDAVLDVL 685



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 20/315 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D  + L+++M+ +GV      + +++++Y + G    A ++  ++ E G+ P    Y+
Sbjct: 382 RMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYS 441

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E R    + ++ NM   G++P+  TY  L+   CK   V+ A  L  EM   
Sbjct: 442 SLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKA 501

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNAL------------- 171
           G  PD V+Y+ +++ + K  + +EA+ L  +      V     Y+AL             
Sbjct: 502 GVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVL 561

Query: 172 --INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
             + G C +  + EA  +   ++DR  + +   YS +I   C  GNV  +L    QM   
Sbjct: 562 ALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQC 621

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN  S  SL++G    G   EA  +  +++    L +  A   LI      G++D  
Sbjct: 622 GFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAV 681

Query: 290 VSVSYQMEENSCPPN 304
           + V + M  +   P+
Sbjct: 682 LDVLHGMARDGLLPS 696


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 149/464 (32%), Positives = 253/464 (54%), Gaps = 31/464 (6%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN +T+  +++ LC   R+  A ++L EM  KGCAP    Y  I+ + C+ G        
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGG------- 161

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
              F + V V  A                    M  +G   +    + +++++C+ G V+
Sbjct: 162 ---FRNSVRVLEA--------------------MHAKGCTLDTGNCNLVLNAICEQGCVD 198

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++G+L ++   GC  +I S+ ++LKG  +  R  +  +L + M+R    PN+V ++TLI
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC NG  +    V  QM E+ C P++  Y+ +IDG  K G+L  A++I NRM S G  
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  ++K LC    + +A  L+ +M  ++CP + VTFN  +   C  G VD  ++L
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIEL 378

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+QM  + C+P++ TY  +++G  +   + EA  L+  +  CG + N V+Y  +L G+C 
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           AG  V+A +L+ +M+ +G   + +TFN +I   CK+G V  AI+LL ++   G  +PD+I
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-CSPDLI 497

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SY++++ G+  +G  +EA   L  M+N+GI PN   ++ +  +L
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACAL 541



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/509 (30%), Positives = 270/509 (53%), Gaps = 8/509 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    +  ++  L    R +    +   M   G  P    Y+++L+A C++     + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV--YNALING 174
           ++L  M  KGC  D  +   ++++IC+ G V+EA    R+LA  FG    +  YNA++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAF-FGCEADIVSYNAVLKG 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC   +  +   L+ EMV     PN++T++T+I  LC  G  E    +L QM   GC P+
Sbjct: 226 LCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I  + +++ G    G    A+++ NRM   G  PNVV Y+T++ GLCS     EA  +  
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +  CP +  T++ L+D F + G +    ++  +M+S+GC P+V+ YT ++   C+  
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +A  L++ M+   C PNTV++   +KGLC  GR   A +L+ QM Q  C PN  T+N
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++ L +   V++A EL+ ++   G   ++++Y+T++ G+ +AG   EA +LL  M+ +
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + I ++ I  A  ++G+VN  IQ+ D I+       D + Y +++  +C       
Sbjct: 526 GISPNTIIYSSIACALSREGRVNKVIQMFDNIK-DTTIRSDAVLYNAVISSLCKRWETDR 584

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  +   M++ G  PN +T+ +L++ L S
Sbjct: 585 AIDFFAYMVSNGCMPNESTYTMLIKGLAS 613



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/532 (30%), Positives = 267/532 (50%), Gaps = 11/532 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  V+      G    AL++   +   G  P   +Y+ IL+A      F     +   M 
Sbjct: 114 FFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMH 173

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KLG 149
             G   +    N++L A+C+   VD A  LL ++   GC  D VSY  ++  +C   + G
Sbjct: 174 AKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWG 233

Query: 150 QVEEARELAMRF--GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            VEE  +  +R      +  +N LI  LC+    E    +L +M + G  P++  Y+TII
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             +C  G++E +  IL +M   G  PN+  + ++LKG     R  EA +L + M ++   
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            + V ++ L+   C NG +D  + +  QM  + C P+V TY+ +I+GF K G +  A  +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              M S GC PN V+YT ++K LC    +  A  L+ +M  + CPPN VTFNT I  LC 
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G V+ A++LL QM    C P++ +Y+ ++DGL +  + +EA EL+  +   GI  N + 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y++I   + R G V +  Q+   +     + DA+ +N +I + CK+ + + AI     + 
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             G   P+  +YT L+ G+ + G  +EA    Q++L+E +C   A    L+R
Sbjct: 594 SNG-CMPNESTYTMLIKGLASEGLAKEA----QELLSE-LCSRGALRKHLMR 639



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 239/512 (46%), Gaps = 34/512 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M  +G +   G    V+N+    G  ++A+ +  ++  FG +  +  YN +L  L 
Sbjct: 168 VLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  +   M R    PN+ T+N L+  LC+N   +  +++L +M   GC PD  
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y TI                              I+G+CKE  +E A  +L  M   G+
Sbjct: 288 MYATI------------------------------IDGICKEGHLEVANEILNRMPSYGL 317

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PNV+ Y+T++  LC     + +  +L +MF + C  +  +F  L+  +   G      +
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L  +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            AG  + A ++ ++MI  GC PN V +  ++  LC+  +  QA  L+++M    C P+ +
Sbjct: 438 SAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 497

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +++T I GL   G+ + A++LL+ M      PN   Y+ +   L R  RV +  ++   I
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +   I+ + V YN ++  +C+      A      M+  G   +  T+ ++I     +G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             A +LL  +   G     ++ +    +GI N
Sbjct: 618 KEAQELLSELCSRGALRKHLMRH----FGISN 645



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 189/358 (52%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L QM   G +    ++ ++I+   + G  E A ++  R+  +GLKP V  YN +L 
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + S M +     +  T+NIL+   C+N  VD   +LL +M + GC P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G ++EA  L     S         Y  ++ GLC   +  +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G  PN +T++T+I+ LC  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EA +L N M+ +G  PN + YS++   L   G +++ + +   +++ +   +   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +A+I    K      A   +  M+SNGC PN   YT ++K L    +  +A  L+ ++
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 206/423 (48%), Gaps = 30/423 (7%)

Query: 168 YNALINGLCKEHKIEE---------------AFWLLCEMVDRG--------------IDP 198
            +ALI  LC   +  E               A+  +     R               + P
Sbjct: 50  LSALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPP 109

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  T+  ++  LC  G +  +L +L +M  +GC P    +  +L+     G    +  + 
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +G   +    + +++ +C  G +DEAV +  ++    C  ++ +Y+A++ G   A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                  ++ + M+   C+PN+V +  ++  LC+N +F + H ++ +M+   C P+   +
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMY 289

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            T I G+C  G ++ A ++L++M  Y   PN+  YN +L GL    R KEA EL++E+ +
Sbjct: 290 ATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ 349

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
               L+ VT+N ++   C+ G+V    +LL +ML  G   D IT+  +I  +CK+G ++ 
Sbjct: 350 KDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDE 409

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ LL  +   G   P+ +SYT +L G+C++G   +A   + +M+ +G  PN  T+N L+
Sbjct: 410 AVMLLKSMSSCG-CKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 559 RSL 561
             L
Sbjct: 469 NFL 471



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM   G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L +  R+     + S M + G  PN  T+N L+  LCK   V+ A +LL +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ EEA EL  +    G+S    +Y+++   L +E ++ +  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  I  + + Y+ +ISSLC     + ++     M   GC PN  ++T L+KG 
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
              G   EA +L + +   G L
Sbjct: 612 ASEGLAKEAQELLSELCSRGAL 633



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V +N  + G C  G++  A +L   +      PN  T+  ++ GL    R+ +A E++ E
Sbjct: 80  VAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLDE 136

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G       Y+ IL   CR+G    + ++L  M  +G  LD    N+++ A C+QG 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+ A+ LL ++   G    DI+SY ++L G+C +    +    + +M+     PN  T+N
Sbjct: 197 VDEAVGLLRKLAFFG-CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 556 VLVRSLFSN 564
            L+  L  N
Sbjct: 256 TLIGYLCRN 264



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 78/157 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  ++    LL+QM V G S     + +VI+   + G  E+AL++   +   G
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IY+ I  AL  E R + +  ++ N+K   +  +   YN ++ +LCK    D A 
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAI 586

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
                M + GC P+  +YT ++  +   G  +EA+EL
Sbjct: 587 DFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQEL 623



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 63/130 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + +    LL  M  +G+S +  ++ S+  +  R G   + ++MF  I++  
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L            ++ M  +G  PN  TY +L+K L        A 
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQ 621

Query: 121 KLLVEMGNKG 130
           +LL E+ ++G
Sbjct: 622 ELLSELCSRG 631


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 265/508 (52%), Gaps = 9/508 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PTV  Y+ ++D      R  +    +  + R GM+ +V   + LL+ LC   R D A  +
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160

Query: 123 LVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEARE---LAMRFGSG----VSVYNALING 174
           L   M   GC PDA+SY+T++ S+C  G+ + A +   +A++ G G    V VY+ +++G
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L KE K+ EA  L  EM  +G+ PNV+TY+++I +LC    V+ + GIL QM   G  P+
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++ +L+ GY   G+  +A  ++  M   G +PN V  ST +  LC +G ++EA     
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M       N+ +YS L+ G+A AG L+  S ++N M+ +G  PN   +  +V    +  
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A  + E M      P+ +T+   I   C  G +D AM   + M      PN   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G      + +A ELV EI   G+   I+++ ++++ +C+ G V EA ++   ++  
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G K D   F  +I  YC  GK++ A ++ D +   G   PDI++Y +L+ G C +G + +
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG-IEPDIVTYGTLVNGCCKNGRIDD 579

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLF 562
             I  +++L++G+ P   T+ +++  LF
Sbjct: 580 GLILFRELLHKGVKPTTFTYGIILDGLF 607



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 263/518 (50%), Gaps = 8/518 (1%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEP-NVFTYNILLKA 109
           +F+R+ E G  P    Y+ +L ++  + R    ++ +   +K+ G  P NV  Y+ ++  
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS-- 166
           L K  +V  A  L  EM  +G  P+ V+Y +++ ++CK   V++A+  L    G+GV   
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280

Query: 167 --VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN LI+G     + ++A  +  EM  RG+ PN +T ST ++ LC  G +E +     
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFD 340

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M  +G   NI S+++LL GY   G   + S+L+N M+R+G +PN   ++ L++G    G
Sbjct: 341 SMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCG 400

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            + EA+ +   M++    P+V TY A+I  F + G++  A   +N MI  G  PN   Y 
Sbjct: 401 MVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQ 460

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
           C+++  C +    +A  L+ ++  +   P  ++F + I  LC  GRV  A ++ D + + 
Sbjct: 461 CLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRT 520

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               ++  +  L+DG   + ++ EAF +   +   GI+ +IVTY T+++G C+ G + + 
Sbjct: 521 GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDG 580

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L  ++L +G K    T+ II+      G+   A ++   +   G     I +Y+ LL 
Sbjct: 581 LILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG-IAVTIPTYSILLT 639

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G+C +   +EA    QK+    +  +    N+++  +F
Sbjct: 640 GLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMF 677



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 257/545 (47%), Gaps = 6/545 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G  C+  V+ +V++   + G   +A  +F+ + + G+ P V  YN ++ AL         
Sbjct: 206 GCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKA 265

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             I   M  +G++P+  TYN L+       +   A ++  EM ++G  P+ V+ +T V+ 
Sbjct: 266 QGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAF 325

Query: 145 ICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK G++EEARE     LA      +  Y+ L++G      + +   L   MV  GI PN
Sbjct: 326 LCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
              ++ +++     G V  ++ I   M  RG NP++ ++ +++  +   G   +A D +N
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MI +G  PN   Y  LI G C++G + +A  + Y++      P + ++++LI+   K G
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A +I++ +I  G   +V  +T ++   C      +A  + + M      P+ VT+ 
Sbjct: 506 RVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYG 565

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T + G C  GR+D  + L  ++      P   TY  +LDGL    R   A E+  E+ + 
Sbjct: 566 TLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIES 625

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI + I TY+ +L G+CR     EA  +  K+     K D +  NI+I    K  +   A
Sbjct: 626 GIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEA 685

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             L   I   G   P + +YT ++  +   G ++EA      ML  G+ P     NV+VR
Sbjct: 686 EGLFASIPDYG-LVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVR 744

Query: 560 SLFSN 564
           +L   
Sbjct: 745 TLLEK 749



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/553 (24%), Positives = 264/553 (47%), Gaps = 43/553 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D  Q +L+QM   GV      + ++I+ Y  +G  +QA++MF  +   G
Sbjct: 252 VIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRG 311

Query: 61  LKPT----------------VKIYNHILDALLAE-NRFSMIN------------------ 85
           + P                 ++      D++LA+ ++ ++I+                  
Sbjct: 312 VIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMS 371

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +++ M RDG+ PN   +NIL+    K   V  A  +  +M  +G  PD ++Y  ++ + 
Sbjct: 372 NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAF 431

Query: 146 CKLGQVEEARE-LAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C++G +++A +        GV    +VY  LI G C    + +A  L+ E+ ++G+ P +
Sbjct: 432 CRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCI 491

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++++++I+ LC  G V  +  I   +   G   +++ FTSL+ GY L G+  EA  + + 
Sbjct: 492 LSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDA 551

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G  P++V Y TL++G C NG +D+ + +  ++      P   TY  ++DG   AG 
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A +++  MI +G +  +  Y+ ++  LC+NN   +A ++ +K+   N   + V  N 
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  +    R + A  L   +  Y  +P + TY  +++ L++   V+EA  + + + K G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +       N I+  +   G +V+A   + ++  +    +A T ++++  +  +GK    +
Sbjct: 732 LSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHL 791

Query: 501 QLLD---RIRGGG 510
            LL    +  GGG
Sbjct: 792 NLLPAKYQFFGGG 804



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 161/385 (41%), Gaps = 78/385 (20%)

Query: 254 ASDLWNRMIR----EGFLPNVVAYSTLI-------------------------------- 277
           A  L+NRM         LP V  YS LI                                
Sbjct: 83  AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142

Query: 278 ---HGLCSNGSMDEAVSVSY-QMEE----------------------------------- 298
               GLC     DEAV V + +M E                                   
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202

Query: 299 --NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
               CP NV  YS ++ G  K G +  A  +++ M   G  PNVV Y  ++  LC+    
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  ++ +M      P+ VT+NT I G    G+   A+++  +M     +PN  T +  
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +  L +  R++EA E    +   G +LNI++Y+T+LHG   AG +V+   L   M+ +G 
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +   FNI++  Y K G V  A+ + + ++  G  NPD+++Y +++   C  G M +A 
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG-LNPDVLTYLAVIHAFCRMGSMDDAM 441

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
                M+++G+ PNFA +  L++  
Sbjct: 442 DKFNHMIDKGVEPNFAVYQCLIQGF 466


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/524 (29%), Positives = 272/524 (51%), Gaps = 23/524 (4%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P++  YN +L AL ++        + ++M RDG+ PNV+TYNIL++ALC   + + A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 120 YKLL-VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFGS---GVSVYNALIN 173
             ++  +M   GCAP+ V+Y T+V++ C+ G+V+ A  L   MR G     +  +N ++N
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  ++E+A  +  EM   G+ P+ ++Y+T++S  C  G +  +L +  +M  +G  P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ +FTSL+      G    A  L  +M   G   N   ++ LI G C NG +D+A+   
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M E    P+V  Y+ LI+G+ K G +  A ++ + M + G  P+VV Y+ ++   C+ 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  L  KM  +   P+ +T+++ I+GLC   R+  A +L ++M Q    P+  TY
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+DG  +   V++A  L  E+ K G+  ++VTY+ ++ G+ ++    EA +LL K+  
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYY 533

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG---------------EWNPDIIS 518
           E    D I +  +++  C+  +  + + LL      G                W  D   
Sbjct: 534 EDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSV 592

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           Y+ L+ G C  G + +A  + +++L  G  PN  +   LVR LF
Sbjct: 593 YSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLF 636



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 251/496 (50%), Gaps = 26/496 (5%)

Query: 23  VEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           + G  C+  V  + +++ ++ R G  + A ++   +RE G++P++  +N +++ L    R
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 ++  M R+G+ P+  +YN L+   CK   +  A  +  EM  KG  PD V++T+
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300

Query: 141 IVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           ++ ++C+ G +E A       RE  +R       + ALI+G C+   +++A   + EM +
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNE--FTFTALIDGFCRNGFLDDALLAMKEMRE 358

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
             I P+V+ Y+ +I+  C +G ++ +  ++ +M  +G  P++ +++++L GY   G T  
Sbjct: 359 CRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDS 418

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A +L  +M+++G +P+ + YS+LI GLC    + +A  +  +M +    P+  TY+ LID
Sbjct: 419 AFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLID 478

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K GN+  A  + + MI  G  P+VV Y+ ++  L ++    +A  L+ K+ +E+  P
Sbjct: 479 GHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVP 538

Query: 374 NTVTFN---------------TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           + + +                  +KG    G ++ A K+   M       + + Y+ L+ 
Sbjct: 539 DNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIH 598

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G  R   + +A     ++ +CG   N  +  +++ G+   GM VEA  ++ ++L   +  
Sbjct: 599 GHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLA 658

Query: 479 DAITFNIIIYAYCKQG 494
           DA T   +I    K+G
Sbjct: 659 DAETSKALIDLNRKEG 674



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 173/365 (47%), Gaps = 45/365 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM+  G+  +E  F ++I+ + R G  + AL     +RE  ++P+V  YN +++   
Sbjct: 317 LVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYC 376

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   M+  GM+P+V TY+ +L   CK    D A++L  +M  KG  PDA+
Sbjct: 377 KLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI 436

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +Y++                              LI GLC+E ++ +A  L  +M+  G+
Sbjct: 437 TYSS------------------------------LIRGLCEERRLGDACELFEKMLQLGL 466

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+  TY+T+I   C  GNV+ +L +  +M  +G  P++ +++ L+ G     RT EA  
Sbjct: 467 QPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQR 526

Query: 257 LWNRMIREGFLPNVVAYSTLIH---------------GLCSNGSMDEAVSVSYQMEENSC 301
           L  ++  E  +P+ + Y  L+H               G    G M++A  V   M +   
Sbjct: 527 LLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHW 586

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
             + + YS LI G  + GN++ A     +++  G SPN  +   +V+ L +  M  +A +
Sbjct: 587 KLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADN 646

Query: 362 LIEKM 366
           +I+++
Sbjct: 647 VIQEL 651



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G +P+++AY  ++  L   ++   A  L+  M  +   PN  T+N  ++ LC  G+ + A
Sbjct: 115 GYAPSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 395 MKLL-DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           + ++ D M+   C PN+ TYN L+    R   V  A  LV  + + G++ ++VT+NT+++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C+AG + +A ++  +M  EG   D +++N ++  YCK G ++ A+ +   +   G   
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV- 292

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           PD++++TSL+  +C +G ++ A   + +M   G+  N  T+  L+     N
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRN 343



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 126/279 (45%), Gaps = 23/279 (8%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG    +D  + L+ +M+ +G+      + ++++ Y ++G  + A ++  ++ + G+ P
Sbjct: 377 KLGR---MDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               Y+ ++  L  E R      ++  M + G++P+ FTY  L+   CK   V  A  L 
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-------------- 169
            EM  KG  PD V+Y+ ++  + K  + +EA+ L  +      V +              
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTA 553

Query: 170 ------ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
                 AL+ G   +  + +A  +   M+DR    +   YS +I   C  GN+  +L   
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFH 613

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
            Q+   G +PN  S  SL++G    G T EA ++   ++
Sbjct: 614 KQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/583 (27%), Positives = 309/583 (53%), Gaps = 9/583 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I+KLG       ++ +L + +++   S  EGV+I  + SY R G  ++A+ +F R+  +
Sbjct: 46  IIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFY 105

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             +P+V  YN I++ L+    F   + ++  MK  G+ P+V+T+ I +K+ C+  R   A
Sbjct: 106 NCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSA 165

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALING 174
            +LL  M ++GC  +AV+Y T+V+   +     EA EL    +R G    VS +N L++ 
Sbjct: 166 LRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHT 225

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+ +++E+  LL +++ +G+  N+ T++  I  LC  G +  ++ +L  +   G  P+
Sbjct: 226 LCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPD 285

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +L+ G        EA    ++++  G  P+   Y+TLI G C  G +  A  +  
Sbjct: 286 VVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ 345

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
                   P+  TY +LI+G  +   +  A  ++N  +  G  P V+ Y  ++K LCQ  
Sbjct: 346 GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEG 405

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  QA  ++ +M+   C  +  T+N  I GLC  G V  A  L++       +P++ T+N
Sbjct: 406 LILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFN 465

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +  +++   +++ ++   G+  +++TYN++L+G+ +A    +  +    M+ +
Sbjct: 466 TLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEK 525

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + IT+NI+  + CK GKVN A+ L+D I   G   PD +S+ +++ G  N+G ++ 
Sbjct: 526 GCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG-ITPDTVSFATIISGFANNGDLKG 584

Query: 535 AFIYLQKMLNE-GICPNFATWNVLVRSLFSNLG-HLGPVYILD 575
           A+   ++M  +  +    AT+N+++ +    L  H+G    L+
Sbjct: 585 AYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLE 627



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/493 (25%), Positives = 246/493 (49%), Gaps = 6/493 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M   G+      F  ++++  + G  +++ ++  ++ + G+   +  +N  +  L 
Sbjct: 203 LFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   S    +  ++ R+G+ P+V TYN L+  LCKN+ V  A K L ++ N G  PD  
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CK+G ++ A ++        F      Y +LINGLC+  +I+ A  L    
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G+ P VI Y+ +I  LC  G +  +L ++ +M   GC+ +I ++  ++ G    G  
Sbjct: 383 LGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCV 442

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A++L N  I +G++P+V  ++TLI G C    M+  + +  +M  +   P+V TY+++
Sbjct: 443 SDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSV 502

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ++G +KA       + +  M+  GC PN + Y  + + LC+    ++A  L++++  +  
Sbjct: 503 LNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGI 562

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P+TV+F T I G    G +  A +L  +M +QY+      TYN +++       +    
Sbjct: 563 TPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGE 622

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  E+   G   +  TY  ++ G C  G     ++ L +M+ +G      TF  +I   
Sbjct: 623 KLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682

Query: 491 CKQGKVNNAIQLL 503
           C Q +V+ A+ ++
Sbjct: 683 CVQHRVHEAVDII 695



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 212/451 (47%), Gaps = 6/451 (1%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I+ L  K  + G   +L  +  EG++     + ++I    +     +A K  +++   GL
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P    YN ++D             I       G  P+ FTY  L+  LC+N+ +D A  
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLC 176
           L      KG  P  + Y  ++  +C+ G + +A ++          S +  YN +INGLC
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K   + +A  L+ + + +G  P+V T++T+I   C    +ET++ IL +M+  G  P++ 
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ S+L G     +  +  + +  M+ +G +PN + Y+ L   LC  G ++EA+ +  ++
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN-GCSPNVVAYTCMVKVLCQNNM 355
                 P+  +++ +I GFA  G+L GA Q++ RM      S     Y  M+    +   
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLD 617

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H    L  +M    C P+T T+   I G C  G  D   K L +M +   +P++TT+  
Sbjct: 618 LHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGR 677

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
           +++ L   +RV EA +++  +   GI   +V
Sbjct: 678 VINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 274/543 (50%), Gaps = 19/543 (3%)

Query: 39  SYR---RVGL----AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           SYR   R GL    A+ A+ +F  +      PTV  ++ +  A+    ++ ++  +   M
Sbjct: 55  SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +  G+  N++T +I++   C+  ++  A+  + ++   G  P+ ++++T+++ +C  G+V
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 174

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA EL  R         +   N L+NGLC   K  EA  L+ +MV+ G  PN +TY  +
Sbjct: 175 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 234

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++ +C  G    ++ +L +M  R    +   ++ ++ G    G    A +L+N M  +G 
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N++ Y+ LI G C+ G  D+   +   M +    PNV T+S LID F K G L  A +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   MI  G +P+ + YT ++   C+ N   +A+ +++ M  + C PN  TFN  I G C
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R+D  ++L  +M     + +  TYN L+ G   + ++  A EL  E+    +  NIV
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY  +L G+C  G   +A ++  K+     +LD   +NIII+  C   KV++A  L   +
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 534

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G   P + +Y  ++ G+C  G + EA +  +KM  +G  P+  T+N+L+R+      
Sbjct: 535 PLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA------ 587

Query: 567 HLG 569
           HLG
Sbjct: 588 HLG 590



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 276/533 (51%), Gaps = 7/533 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D V  L +QM+++G++ +      +IN + R      A     +I + G +P    ++
Sbjct: 103 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 162

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E R S    +   M   G +P++ T N L+  LC + +   A  L+ +M   
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+AV+Y  +++ +CK GQ   A EL  +            Y+ +I+GLCK   ++ A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EM  +GI  N+ITY+ +I   C+ G  +    +L  M  R  NPN+ +F+ L+  
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           ++  G+  EA +L   MI  G  P+ + Y++LI G C    +D+A  +   M    C PN
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ LI+G+ KA  +    +++ +M   G   + V Y  +++  C+    + A  L +
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M     PPN VT+   + GLC  G  + A+++ +++++ +   +I  YN ++ G+   +
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +V +A++L   +   G++  + TYN ++ G+C+ G + EA  L  KM  +G   D  T+N
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 582

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           I+I A+   G    +++L++ ++  G ++ D  S   ++  + + G ++++F+
Sbjct: 583 ILIRAHLGDGDATKSVKLIEELKRCG-FSVD-ASTIKMVIDMLSDGRLKKSFL 633



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 170/360 (47%), Gaps = 5/360 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G++ +   +  +I  +   G  +   K+   + +  
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D+ + E +      ++  M   G+ P+  TY  L+   CK N +D A 
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           +++  M +KGC P+  ++  +++  CK  ++++  EL  +       +    YN LI G 
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  L  EMV R + PN++TY  ++  LCD G  E +L I  ++       +I
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G  P V  Y+ +I GLC  G + EA  +  +
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE+   P+  TY+ LI      G+   + ++   +   G S +      ++ +L    +
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 270/516 (52%), Gaps = 10/516 (1%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRDGM 96
           +S+R +   + AL  F  +      P +  +  +L A++   ++  ++  +   M+  G+
Sbjct: 68  SSFRNI---DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGL 124

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            PN++T +I +   C+  RVD  + +L ++   G  P  V++TT+++ +CK+G+  +A E
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184

Query: 157 L-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L     A      V  YN +INGLCK  +   A  LL +M + G  PN++TYST+I SLC
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC 244

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               V  +L I   M  +G +P+I ++TSL++G     R  EAS L N M     +P++V
Sbjct: 245 RDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV 304

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++ L+   C  G + EA+ V   M E    PNV TYS+L+ G++   +++ A ++++ M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           I+ GC PN+ +Y  ++   C+     +A  L  +M  +   PN V++NT I G C  G++
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  L   M     LP++ TY+ LLDG  +   + +AF L   ++   ++ N+V Y  +
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTIL 484

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +H +C++G   +A +L  ++ ++G +     +  II   CK+G ++ A++    +   G 
Sbjct: 485 VHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG- 543

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             PD ISY  ++ G+        A + + +M + G 
Sbjct: 544 CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGF 579



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 240/501 (47%), Gaps = 45/501 (8%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I K+G+    D V  L +QM++ G+S +       +N + ++   +    +  ++ + GL
Sbjct: 102 IVKMGQY--YDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGL 159

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +PT+  +  +++ L     F+    ++ +M   G +P+V+TYN ++  LCK      A  
Sbjct: 160 QPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAG 219

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLC 176
           LL +M   GC P+ V+Y+T++ S+C+   V EA ++     A      +  Y +LI GLC
Sbjct: 220 LLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLC 279

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ----------- 225
           K  + +EA  LL EM    I P+++T++ ++ + C  G V  +LG+L             
Sbjct: 280 KFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVV 339

Query: 226 ------------------------MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
                                   M  +GC PNI S+  L+ GY    R  EA  L+N M
Sbjct: 340 TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM 399

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I +G  PN V+Y+TLIHG C  G + EA  +   M  N   P++ TYS L+DGF K G L
Sbjct: 400 IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYL 459

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A +++  M S    PN+V YT +V  +C++     A  L  ++  +   P+   + T 
Sbjct: 460 GKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTI 519

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC  G +D A++    M+   C P+  +YN ++ GLL+      A  LV E+   G 
Sbjct: 520 INGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGF 579

Query: 442 QLNIVTYNTILHGVCRAGMVV 462
              I      L  VC+   V+
Sbjct: 580 ---IADVRPCLSEVCQGKKVM 597



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 228/452 (50%), Gaps = 30/452 (6%)

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGL 175
           +D A      M ++   P  + +  ++S+I K+GQ                 Y  ++  L
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQ-----------------YYDVVISL 115

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K+           E+V  G+ PN+ T S  ++  C +  V+    +L ++   G  P I
Sbjct: 116 SKQM----------ELV--GLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTI 163

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT+L+ G    G   +A +L++ M+ +G  P+V  Y+T+I+GLC  G    A  +  +
Sbjct: 164 VTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKK 223

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE  C PN+ TYS LID   +   +  A  I++ M + G SP++  YT +++ LC+ + 
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           + +A +L+ +M   N  P+ VTFN  +   C  G+V  A+ +L  M +    PN+ TY+ 
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G      V EA +L   +   G + NI +YN +++G C+A  + EA QL  +M+ +G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + +++N +I+ +C+ GK+  A  L   +   G   PD+ +Y+ LL G C  G + +A
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNL-PDLFTYSILLDGFCKQGYLGKA 462

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
           F   + M +  + PN   + +LV ++  +  H
Sbjct: 463 FRLFRAMQSTYLKPNLVMYTILVHAMCKSGNH 494



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 3/355 (0%)

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS-DLWNRMIREGFLPNVVAY 273
           N++ +L     M  R   P I  F  LL   +  G+ ++    L  +M   G  PN+   
Sbjct: 72  NIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTL 131

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S  ++  C    +D   SV  ++ +    P + T++ LI+G  K G    A ++++ M++
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            GC P+V  Y  ++  LC+      A  L++KM    C PN VT++T I  LC    V+ 
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ +   MK     P+I TY  L+ GL + +R KEA  L+ E+    I  +IVT+N ++ 
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             C+ G V EA  +L  M   G + + +T++ ++Y Y     V  A +L   +   G   
Sbjct: 312 TFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKG-CK 370

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           P+I SY  L+ G C +  + EA     +M+++G+ PN  ++N L+   F  LG L
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG-FCQLGKL 424



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 2/256 (0%)

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH-SLIEK 365
           TY    D  +   N+  A   +N M+     P ++ +  ++  + +   ++    SL ++
Sbjct: 59  TYQHKNDASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQ 118

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      PN  T + F+   C   RVD    +L ++ +    P I T+  L++GL +V  
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             +A EL  ++   G Q ++ TYNTI++G+C+ G    A  LL KM   G + + +T++ 
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I + C+   VN A+ +   ++  G  +PDI +YTSL+ G+C     +EA   L +M + 
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKG-ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 546 GICPNFATWNVLVRSL 561
            I P+  T+NVLV + 
Sbjct: 298 NIMPDIVTFNVLVDTF 313


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 177/583 (30%), Positives = 273/583 (46%), Gaps = 57/583 (9%)

Query: 36  VINSYRRVGL--AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF------SMINPI 87
           +I +  R G    + ALK+F          ++  +N +L A+ + +R        ++   
Sbjct: 19  IIGARARAGSLSVDDALKLFDEFLHHARPASIIAFNQLLAAVSSASRRGSSSTSELVVSC 78

Query: 88  YSNMKRD---GMEPNVFTYNIL------------------------------------LK 108
           ++ M RD    + P+VFTY+IL                                    LK
Sbjct: 79  FNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLK 138

Query: 109 ALCKNNRVDGAYK-LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG--- 164
            LC   RV  A   LL  M   GC P+ VSY T++   C   + EEA EL      G   
Sbjct: 139 GLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR 198

Query: 165 -----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                +  YN +ING   E ++++A+ L  +M D+GI PNV+TY+ +I  LC    V+ +
Sbjct: 199 SCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRA 258

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
            G+  QM  +G  PNI ++T L+ GYL  G+  E   +   M   G  P+   Y  L+  
Sbjct: 259 EGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDY 318

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G   EA  +   M      P+V+ Y  ++ G+A  G L       + M+ NG SPN
Sbjct: 319 LCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPN 378

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
              +  +     +  M  +A  +  KM  +   PN V + T I  LC  GRVD A    +
Sbjct: 379 HYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFN 438

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           QM      PNI  +  L+ GL  +++ ++A EL  E+   GI  N+V +NTI+  +C  G
Sbjct: 439 QMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            V++A +L+  M   GT+ D I++N +I  +C  GK + A +LLD +   G   P+  +Y
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG-LKPNECTY 557

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +LL G C  G + +A+   Q+ML+ GI P   T+N ++  LF
Sbjct: 558 NTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLF 600



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 271/589 (46%), Gaps = 44/589 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK---PTVKIYNHILD 73
           LL++M   G + +   + +++  +     AE+AL++ + + +  ++   P +  YN +++
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +      ++ +M   G+ PNV TY I++  LCK   VD A  +  +M +KG  P
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272

Query: 134 DAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           + V+YT ++     +GQ +E  R L      G+      Y  L++ LCK+ K  EA  L 
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M+ +GI P+V  Y  I+      G +      L  M   G +PN + F  +   +   
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKK 392

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               EA D++N+M ++G  PNVV Y+TLI  LC  G +D+A     QM      PN+  +
Sbjct: 393 AMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVF 452

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           ++L+ G         A +++  M++ G  PNVV +  ++  LC      +A  LI+ M  
Sbjct: 453 TSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER 512

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+ +++N  I+G C  G+ D A KLLD M      PN  TYN LL G  R  R+ +
Sbjct: 513 VGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDD 572

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT------------ 476
           A+ +  E+   GI   +VTYNTILHG+ +     EA +L   M+  G             
Sbjct: 573 AYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILN 632

Query: 477 -----------------------KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
                                  ++D ITFNI+I A  K G+  +A+ L   I   G   
Sbjct: 633 GLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG-LV 691

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           PD+ +Y  +   +   G ++E      +M   G  PN    N LVR L 
Sbjct: 692 PDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 253/485 (52%), Gaps = 5/485 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L++M   G+      +  +++   + G   +A K+F  +   G+KP V IY  IL 
Sbjct: 293 VVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILH 352

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               +   S ++     M  +G+ PN + +NI+  A  K   +  A  +  +M  +G +P
Sbjct: 353 GYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSP 412

Query: 134 DAVSYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           + V+Y T++ ++CKLG+V++A  +       GV+    V+ +L+ GLC   K E+A  L 
Sbjct: 413 NVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELF 472

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EMV++GI PNV+ ++TI+ +LC  G V  +  ++  M   G  P+I S+ +L++G+ L 
Sbjct: 473 FEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLV 532

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+T EAS L + M+  G  PN   Y+TL+HG C +G +D+A SV  +M  N   P V TY
Sbjct: 533 GKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTY 592

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++ G  K      A +++  MI++G   ++  Y  ++  L +NN   +A  + + +  
Sbjct: 593 NTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCS 652

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           ++   + +TFN  I  L   GR + AM L   +     +P++TTY  + + L+    ++E
Sbjct: 653 KDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEE 712

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
              + +E+EK G   N +  N ++  +   G +  A   L K+  +   L+A T +++I 
Sbjct: 713 FDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLIS 772

Query: 489 AYCKQ 493
            + ++
Sbjct: 773 LFSRE 777



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 241/511 (47%), Gaps = 5/511 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + + QQM  +GV  +   +  +I+ Y  +G  ++ ++M   +   G
Sbjct: 245 VIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHG 304

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P    Y  +LD L  + + +    ++ +M R G++P+V  Y I+L        +   +
Sbjct: 305 LEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMH 364

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
             L  M   G +P+   +  +  +  K   + EA ++   MR       V  Y  LI+ L
Sbjct: 365 SFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDAL 424

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A     +M++ G+ PN++ +++++  LC +   E +  +  +M  +G +PN+
Sbjct: 425 CKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNV 484

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F +++      GR  +A  L + M R G  P++++Y+ LI G C  G  DEA  +   
Sbjct: 485 VFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDI 544

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ L+ G+ + G +  A  ++  M+SNG +P VV Y  ++  L +   
Sbjct: 545 MLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A  L   M       +  T+N  + GL     VD A+K+   +   +   +I T+N 
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++  LL+  R ++A  L   I   G+  ++ TY  I   +   G + E   +  +M   G
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
              +++  N ++     +G ++ A   L +I
Sbjct: 725 CAPNSLMLNFLVRRLLLRGDISRAGAYLSKI 755


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 251/460 (54%), Gaps = 9/460 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG- 164
           L+ L +   ++  +K L  M   G  PD +  TT++   C++G+  +A + L +  GSG 
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 165 ---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN +I+G CK  +I  A  +L  M    + P+V+TY+TI+ SLCD G ++ ++ 
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M  R C P++ ++T L++         +A  L + M   G  P+VV Y+ L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA+     M  + C PNV T++ ++      G  + A ++   M+  G SP+VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++  LC+  +  +A  ++EKM    C PN++++N  + G C   ++D A++ L++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               C P+I TYN +L  L +  +V++A E++ ++   G    ++TYNT++ G+ +AG  
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A +LL +M  +  K D IT++ ++    ++GKV+ AI+        G   P+ +++ S
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG-VRPNAVTFNS 524

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G+C +     A  +L  M+N G  P   ++ +L+  L
Sbjct: 525 IMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGL 564



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 243/470 (51%), Gaps = 8/470 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+  K    +   G  P +     ++       +      I   ++  G  P+V 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TYN+++   CK   ++ A  +L  M     +PD V+Y TI+ S+C  G++++A E+  R 
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y  LI   C++  + +A  LL EM DRG  P+V+TY+ +++ +C  G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M   GC PN+ +   +L+     GR  +A  L   M+R+GF P+VV ++ L
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+ LC  G +  A+ +  +M ++ C PN  +Y+ L+ GF K   +  A +   RM+S GC
Sbjct: 351 INFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  M+  LC++     A  ++ +++ + C P  +T+NT I GL   G+   A+K
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LLD+M+  +  P+  TY+ L+ GL R  +V EA +   E E+ G++ N VT+N+I+ G+C
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLC 530

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +      A   L  M+  G K    ++ I+I     +G    A++LL+ +
Sbjct: 531 KTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 237/460 (51%), Gaps = 3/460 (0%)

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           NM   G  P++     L++  C+  +   A K+L  +   G  PD ++Y  ++S  CK G
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAG 186

Query: 150 QVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           ++  A  +   M     V  YN ++  LC   K+++A  +L  M+ R   P+VITY+ +I
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            + C    V  ++ +L +M  RGC P++ ++  L+ G    GR  EA    N M   G  
Sbjct: 247 EATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNV+ ++ ++  +CS G   +A  +   M      P+V T++ LI+   + G L  A  I
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
             +M  +GC PN ++Y  ++   C+     +A   +E+M    C P+ VT+NT +  LC 
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G+V+ A+++L+Q+    C P + TYN ++DGL +  +  +A +L+ E+    ++ + +T
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y++++ G+ R G V EA +   +    G + +A+TFN I+   CK  + + AI  L  + 
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMI 546

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             G   P   SYT L+ G+   G  +EA   L ++ N+G+
Sbjct: 547 NRG-CKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 232/446 (52%), Gaps = 8/446 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  + R+G   +A K+   +   G  P V  YN ++       +   IN   S + R 
Sbjct: 142 TLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYC---KAGEINNALSVLDRM 198

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + P+V TYN +L++LC + ++  A ++L  M  + C PD ++YT ++ + C+   V +A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQA 258

Query: 155 REL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +L   MR       V  YN L+NG+CKE +++EA   L +M   G  PNVIT++ I+ S
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +C  G    +  +L  M  +G +P++ +F  L+      G    A D+  +M + G  PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPN 378

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            ++Y+ L+HG C    MD A+    +M    C P++ TY+ ++    K G +  A +I N
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           ++ S GCSP ++ Y  ++  L +     +A  L+++M  ++  P+T+T+++ + GL   G
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREG 498

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +VD A+K   + ++    PN  T+N ++ GL +  +   A + +  +   G +    +Y 
Sbjct: 499 KVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYT 558

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEG 475
            ++ G+   GM  EA +LL ++  +G
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 214/374 (57%), Gaps = 6/374 (1%)

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +  L   G +E     L  M   G  P+I   T+L++G+   G+T +A+ +   +   G 
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+V+ Y+ +I G C  G ++ A+SV  +M   S  P+V TY+ ++     +G L  A +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + +RM+   C P+V+ YT +++  C+++   QA  L+++M    C P+ VT+N  + G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             GR+D A+K L+ M    C PN+ T+N +L  +    R  +A +L+ ++ + G   ++V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T+N +++ +CR G++  A  +L KM   G + +++++N +++ +CK+ K++ AI+ L+R+
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G + PDI++Y ++L  +C  G +++A   L ++ ++G  P   T+N ++  L +  G
Sbjct: 406 VSRGCY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL-AKAG 463

Query: 567 HLG-PVYILDDIMA 579
             G  + +LD++ A
Sbjct: 464 KTGKAIKLLDEMRA 477



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 210/425 (49%), Gaps = 33/425 (7%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N  +  L +  ++EE F  L  MV  G  P++I  +T+I   C +G    +  IL  +  
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 229 RGCNPNIHSFTSLLKGYLLG--------------------------------GRTHEASD 256
            G  P++ ++  ++ GY                                   G+  +A +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + +RM++    P+V+ Y+ LI   C +  + +A+ +  +M +  C P+V TY+ L++G  
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G L  A +  N M S+GC PNV+ +  +++ +C    +  A  L+  M  +   P+ V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           TFN  I  LC  G +  A+ +L++M ++ C PN  +YN LL G  +  ++  A E +  +
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
              G   +IVTYNT+L  +C+ G V +A ++L ++  +G     IT+N +I    K GK 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             AI+LLD +R   +  PD I+Y+SL+ G+   G + EA  +  +    G+ PN  T+N 
Sbjct: 466 GKAIKLLDEMR-AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNS 524

Query: 557 LVRSL 561
           ++  L
Sbjct: 525 IMLGL 529



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 197/397 (49%), Gaps = 8/397 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+    +L +M    VS     + +++ S    G  +QA+++  R+ +    P V  Y 
Sbjct: 187 EINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A   ++       +   M+  G  P+V TYN+L+  +CK  R+D A K L +M + 
Sbjct: 244 ILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           GC P+ +++  I+ S+C  G+  +A +L        F   V  +N LIN LC++  +  A
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M   G  PN ++Y+ ++   C    ++ ++  L +M  RGC P+I ++ ++L  
Sbjct: 364 IDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A ++ N++  +G  P ++ Y+T+I GL   G   +A+ +  +M      P+
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TYS+L+ G ++ G +  A + ++     G  PN V +  ++  LC+     +A   + 
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLV 543

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            M    C P   ++   I+GL   G    A++LL+++
Sbjct: 544 YMINRGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 131/264 (49%), Gaps = 5/264 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL  M  +G S S   F  +IN   R GL  +A+ +  ++ + G +P    YN +L 
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +          M   G  P++ TYN +L ALCK+ +V+ A ++L ++ +KGC+P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
             ++Y T++  + K G+  +A +L     A         Y++L+ GL +E K++EA    
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E    G+ PN +T+++I+  LC     + ++  L  M  RGC P   S+T L++G    
Sbjct: 508 HEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYE 567

Query: 249 GRTHEASDLWNRMIREGFLPNVVA 272
           G   EA +L N +  +G +    A
Sbjct: 568 GMAKEALELLNELCNKGLMKRSSA 591



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 100/183 (54%), Gaps = 4/183 (2%)

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V  N  ++ L   G ++   K L+ M  +  +P+I     L+ G  R+ + ++A +++  
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +E  G   +++TYN ++ G C+AG +  A  +L +M +     D +T+N I+ + C  GK
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGK 219

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           +  A+++LDR+     + PD+I+YT L+   C   G+ +A   L +M + G  P+  T+N
Sbjct: 220 LKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYN 278

Query: 556 VLV 558
           VLV
Sbjct: 279 VLV 281



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 92/164 (56%), Gaps = 4/164 (2%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N  L  L+R   ++E F+ +  +   G   +I+   T++ G CR G   +A ++L  +  
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G   D IT+N++I  YCK G++NNA+ +LDR+      +PD+++Y ++L  +C+SG ++
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLK 221

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +A   L +ML     P+  T+ +L+ +   + G    + +LD++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM 265



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 76/157 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  +++    +L Q+  +G S     + +VI+   + G   +A+K+   +R   
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y+ ++  L  E +       +   +R G+ PN  T+N ++  LCK  + D A 
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
             LV M N+GC P   SYT ++  +   G  +EA EL
Sbjct: 540 DFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALEL 576



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 4/119 (3%)

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           L  V  N  L  + R G + E F+ L  M+  G   D I    +I  +C+ GK   A ++
Sbjct: 100 LEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKI 159

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L+ + G G   PD+I+Y  ++ G C +G +  A   L +M    + P+  T+N ++RSL
Sbjct: 160 LEVLEGSGAV-PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSL 214


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 280/536 (52%), Gaps = 6/536 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GV+  V NS+ + G  E+ L     + E GL P +   N IL  L   N+  + +  +  
Sbjct: 206 GVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M R G  PN+ T++ L+   CK  R+D A+ L   M  KG  PD V Y+ +++ + + G+
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325

Query: 151 VEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +EE   L +M    GV     +++++++   +   + +A  +   M+  GI PNV+TYS 
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+ LC  G V  + G+ GQ+  +G  P++ +++SL+ G+       +   L+  M+R+G
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            +P+VV  S LI+GL   G MDEA+   +Q  +     N   ++ALIDG  +        
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++  M      P+VV YT +VK L +     +A +L  ++  +   P+ + + T I G 
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C        +++   M+     P+I  YN L++   R   V+   EL+ EI K G++ +I
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYNT++ G C   +  +A +L   +    T+ +AITF I+I AYCK G++++A+ +   
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G   P+I++Y+ L+ G   +   + AF   +KML + + PN  ++++L+  L
Sbjct: 686 MLERGP-EPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 259/532 (48%), Gaps = 13/532 (2%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           ++  +D    L   M  +G+     ++  +IN   R G  E+   +F      G+K  V 
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           I++ I+DA +          +Y+ M ++G+ PNV TY+IL+  LC+N RV  A  +  ++
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKI 181
             +G  P  ++Y++++   CK   + +   L    +R G    V V + LINGL ++  +
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +EA     + V RG+  N   ++ +I     +      L +   M +    P++ ++T L
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVL 526

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +KG    GR  EA  L+ +++++GF P+ + Y TLI G C        + +   M+ N  
Sbjct: 527 VKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGI 586

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P++  Y+ LI+ F + G +    ++   +I  G  P++V Y  M+   C   +F +A  
Sbjct: 587 FPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK 646

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L E +      PN +TF   I   C  GR+D AM +   M +    PNI TY+ L+DG  
Sbjct: 647 LFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYF 706

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE---AFQ-LLGKMLIEGTK 477
           +    + AFEL  ++    +  NIV+Y+ ++ G+C+ G++ E   AFQ  +G+ L+    
Sbjct: 707 KTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLP--- 763

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            D I + I+I  YCK G++  A+ L D +   G    D++      +G  +S
Sbjct: 764 -DVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDS 814



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 263/539 (48%), Gaps = 6/539 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
               M   G S +   F ++IN Y +    ++A  ++  + E G+ P + IY+ +++ L 
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    N ++S     G++ +V  ++ ++ A  +   +  A ++   M  +G +P+ V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ +++ +C+ G+V EA     + L       V  Y++LI+G CK   + + F L   M
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G  P+V+  S +I+ L   G ++ +L    Q   RG   N + F +L+ G     RT
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +   ++  M     +P+VV Y+ L+ GL   G +DEA+++ +Q+ +    P+   Y  L
Sbjct: 502 RDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTL 561

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDGF K  +     QI+  M SNG  P++  Y  ++ +  +         L+ ++     
Sbjct: 562 IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGL 621

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ VT+NT I G C       A+KL + +K     PN  T+  L+D   +  R+ +A  
Sbjct: 622 EPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAML 681

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           + + + + G + NI+TY+ ++ G  +      AF+L  KML +    + ++++I+I   C
Sbjct: 682 IFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLC 741

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           K+G +  A  L  +   G    PD+I+Y  L+ G C  G + EA +    ML  GI P+
Sbjct: 742 KKGLMEEA-SLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 203/429 (47%), Gaps = 32/429 (7%)

Query: 161 FGSGVS-VYNALINGLCKEHKIEEAF----WL-----------LCEMVDRGIDPNVI--- 201
           +GS  S VY+ L++  C+   ++ A     W+             EM+D  ID + I   
Sbjct: 135 YGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 202 ------------TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
                        Y  + +S    G VE  L     +  RG  P I     +LKG  +G 
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +   ASD ++ M+R G  PN+V +STLI+  C    +DEA S+   M E    P++  YS
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI+G  +AG L   + +++  ++ G   +VV ++ ++    +     +A  +  +M  E
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN VT++  I GLC  GRV  A  +  Q+ +    P++ TY+ L+DG  +   +++ 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           F L   + + G   ++V  + +++G+ R GM+ EA +   + +  G  L+   FN +I  
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +  + +++   + G  +  PD+++YT L+ G+   G + EA     ++L +G  P
Sbjct: 495 CFRLKRTRDGLKMY-ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553

Query: 550 NFATWNVLV 558
           +   +  L+
Sbjct: 554 DHIIYCTLI 562



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 31/319 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L E+  +D    L  Q+  +G S    ++ ++I+ + +       L++F  ++  G
Sbjct: 526 LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNG 585

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P + IYN +++    E     +  +   + + G+EP++ TYN ++   C       A 
Sbjct: 586 IFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAI 645

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL   +      P+A+++T ++ + CK G                              +
Sbjct: 646 KLFEVLKCGRTQPNAITFTILIDAYCKDG------------------------------R 675

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A  +   M++RG +PN++TYS +I       N E++  +  +M     +PNI S++ 
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G   EAS  +   I    LP+V+AY  LI G C  G + EA+ +   M  N 
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 301 CPPNVTTYSALID-GFAKA 318
             P+     AL + GF  +
Sbjct: 796 IMPDDLLQKALAEYGFQDS 814


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/507 (30%), Positives = 262/507 (51%), Gaps = 11/507 (2%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRV 116
            F + P+ + YN +L A    +  + +  +Y  M  RD + P  FT++I  +ALC+  R 
Sbjct: 129 RFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRA 188

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNAL 171
           D A  +L  M   GC PD V Y T++ ++C  G V EA  L      M   + V+ +N +
Sbjct: 189 DEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDI 248

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GLC   ++ EA  L+  M+ RG  PN ITY  ++  LC    VE +  +LG    R  
Sbjct: 249 VHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLG----RVP 304

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             N+  F +++   LL G+  EA++L+  M  +G  P+   YS LIHGLC  G +  A+ 
Sbjct: 305 ELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMK 364

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +ME+    P++ TY+ L+  F + G       +   M   G S N+  Y  M+  +C
Sbjct: 365 LLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVC 424

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           ++     A   +++M  +   P+  T+NT I  LC   +++ A  L + +     + N  
Sbjct: 425 KDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAI 484

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L+  LLR    ++A  L  ++   G  L+IV+YN ++  +CR G V  +  LL +M
Sbjct: 485 TYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEM 544

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
             +G K + +++N++I   CK  +V +A++L   +    E  PDI++Y +L+ G+C  G 
Sbjct: 545 AEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQ-ELTPDIVTYNTLINGLCKMGW 603

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLV 558
           M  A   L+K+ NE +  +  T+N+L+
Sbjct: 604 MHAALNLLEKLHNEDVHADIITYNILI 630



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 247/522 (47%), Gaps = 36/522 (6%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C  D +    + +  + V  +   F     +  R+G A++AL M   +   G  P   +Y
Sbjct: 151 CHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLY 210

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++ AL A+   +    +   M   G   +V T+N ++  LC   R+  A +L+  M  
Sbjct: 211 QTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMI 270

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAR-------------------------------EL 157
           +GC P+A++Y  ++  +C   QVEEAR                               EL
Sbjct: 271 RGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAEL 330

Query: 158 AMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               GS         Y+ LI+GLCK  ++  A  LL EM D+G  P+++TY+ ++ S C 
Sbjct: 331 YETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCR 390

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  +    +L  M  +G + N+  +  ++       R  +A      M  +G+ P++  
Sbjct: 391 NGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICT 450

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+T+I+ LC+N  M+EA  +   +       N  TY+ LI    + G+   A  + N M+
Sbjct: 451 YNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMV 510

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +GCS ++V+Y  ++K LC++    ++  L+ +MA +   PN V++N  I  LC   RV 
Sbjct: 511 LHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVR 570

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  +M   E  P+I TYN L++GL ++  +  A  L+ ++    +  +I+TYN ++
Sbjct: 571 DALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILI 630

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
              C+A ++ +A  LL + +  G   +  T+ I++  + ++ 
Sbjct: 631 SWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 201/384 (52%), Gaps = 7/384 (1%)

Query: 183 EAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTS 240
            A  LL ++  R  + P+  +Y+T++++          L +  +M  R    P   +F+ 
Sbjct: 118 RALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSI 177

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
             +     GR  EA  +   M R G +P+ V Y T+IH LC+ G ++EA ++  +M    
Sbjct: 178 AARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMG 237

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C  +V T++ ++ G    G L  A+++ +RM+  GC PN + Y  ++K LC  +   +A 
Sbjct: 238 CSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR 297

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +++ ++       N V FNT I      G++  A +L + M    C P+  TY+ L+ GL
Sbjct: 298 TMLGRVP----ELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGL 353

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            ++ R+  A +L+ E+E  G   +IVTY  +LH  CR GM      +L  M  +G  ++ 
Sbjct: 354 CKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNL 413

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
             +N +I A CK  ++++A++ +  ++  G + PDI +Y ++++ +CN+  M+EA    +
Sbjct: 414 EGYNGMICAVCKDRRMDDAMRFMQEMKSQG-YKPDICTYNTIIYHLCNNNQMEEAEYLFE 472

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
            +L+EG+  N  T+N L+ +L  N
Sbjct: 473 NLLHEGVVANAITYNTLIHALLRN 496


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 291/562 (51%), Gaps = 14/562 (2%)

Query: 13  GVQYLL--QQMKVEGVSC---SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
            + YLL   Q     VSC   S+ +    I +Y   G   QA ++F R++  G++PT+  
Sbjct: 102 SLHYLLLHPQKTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLT 161

Query: 68  YNHILDALL---AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
            N +L+AL+   + +   +   ++++  + G++ N  ++NIL+   C  NR   A ++L 
Sbjct: 162 CNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLG 221

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
           +M + GC PD ++Y TI+  +CK G++ EAR+L +   +       + +N L+ G C+  
Sbjct: 222 KMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLG 281

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            ++EA  ++  M    + P+  TY+ +IS  C  G +  ++ +  +M     +P++ ++ 
Sbjct: 282 WLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYN 341

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+ G    G + E   L   M   G  PN V Y+ ++      G MDE      +MEE+
Sbjct: 342 TLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEES 401

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C P++ TY+ LI    K G +  A ++ + M   G   + V    M++ LC+     +A
Sbjct: 402 GCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEA 461

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           H L+          + V++ T I G     +   A++L D+MK+ E +P+I TYN ++ G
Sbjct: 462 HDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAG 521

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L ++ +  +A + + E+ + G+  + +TYNTI+HG C+ G V +AFQ   KM+ +  K D
Sbjct: 522 LCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPD 581

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +T N ++   CK+G +  A++L +     G+ + D +SY +++  +C      EAF  L
Sbjct: 582 VVTCNTLLCGLCKEGMLEKALKLFNTWISKGK-DVDAVSYNTIILSLCKEKRFGEAFDLL 640

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
           ++M  + + P+  T+N ++  L
Sbjct: 641 EEMEEKKLGPDCYTYNAILGGL 662



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 248/515 (48%), Gaps = 29/515 (5%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A+++  ++R++G  P    YN ILD L  + R +    +  +MK  G+ PN  T+NIL+
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILV 274

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFG 162
              C+   +  A  ++  M      PDA +Y  ++S  CK G++ EA  L      ++  
Sbjct: 275 VGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLS 334

Query: 163 SGVSVYNALINGLCKEH-KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             V  YN LING C EH   EE F L+ EM  RG+ PN +TY+ ++      G ++    
Sbjct: 335 PDVVTYNTLING-CFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
            + +M   GC P+I ++ +L+  +   G+  EA  L + M R+G   + V  +T++  LC
Sbjct: 394 TVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALC 453

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +DEA  +           +  +Y  LI G+ K      A ++W+ M      P+++
Sbjct: 454 RERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSII 513

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  M+  LCQ    +QA   ++++      P+ +T+NT I G C  G+V+ A +  ++M
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            +    P++ T N LL GL +   +++A +L       G  ++ V+YNTI+  +C+    
Sbjct: 574 VEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRF 633

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----------- 510
            EAF LL +M  +    D  T+N I+      G++ +A + + +I   G           
Sbjct: 634 GEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGK 693

Query: 511 -----------EWNPDIISYTSLLWGICNSGGMQE 534
                      E +P+ I+Y++ +  +C+ G  ++
Sbjct: 694 RQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 226/449 (50%), Gaps = 5/449 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K  ++  + LL  MK +G+  +   F  ++    R+G  ++A  +   + +  
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN ++     + R +    +   M+   + P+V TYN L+    ++   +  +
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGF 357

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           KL+ EM  +G  P++V+Y  +V    K G+++E  +   +         +  YN LI+  
Sbjct: 358 KLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWH 417

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++EAF L+ EM  +G+  + +T +T++ +LC    ++ +  +L     RG   + 
Sbjct: 418 CKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDE 477

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ GY    +  +A  LW+ M  +  +P+++ Y+++I GLC  G  ++A+    +
Sbjct: 478 VSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDE 537

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E+   P+  TY+ +I G+ + G +  A Q  N+M+     P+VV    ++  LC+  M
Sbjct: 538 LLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGM 597

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L      +    + V++NT I  LC   R   A  LL++M++ +  P+  TYN 
Sbjct: 598 LEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNA 657

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           +L GL    R+K+A E +++I + G   N
Sbjct: 658 ILGGLTDAGRMKDAEEFISKIAEKGKSEN 686



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 37/220 (16%)

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV---NRVKEAFELVTEIEK 438
           I     CGR   A ++ ++MK+    P + T N LL+ L+R    + ++ +  + T+  K
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+++N  ++N ++HG C      EA ++LGKM   G   D IT+N I+   CK+G++N 
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 499 AIQLLDRIRGGGEWN----------------------------------PDIISYTSLLW 524
           A  LL  ++  G +                                   PD  +Y  ++ 
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G C  G + EA    ++M N  + P+  T+N L+   F +
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 23/135 (17%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G+ E+ALK+F      G       YN I+ +L  E RF     +   M+   + P+ +
Sbjct: 594 KEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCY 653

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCA-----------------------PDAVSY 138
           TYN +L  L    R+  A + + ++  KG +                       P+A++Y
Sbjct: 654 TYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAY 713

Query: 139 TTIVSSICKLGQVEE 153
           +  ++ +C  G+ ++
Sbjct: 714 SNKINELCSQGRYKD 728


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 280/536 (52%), Gaps = 6/536 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GV+  V NS+ + G  E+ L     + E GL P +   N IL  L   N+  + +  +  
Sbjct: 206 GVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M R G  PN+ T++ L+   CK  R+D A+ L   M  KG  PD V Y+ +++ + + G+
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325

Query: 151 VEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +EE   L +M    GV     +++++++   +   + +A  +   M+  GI PNV+TYS 
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+ LC  G V  + G+ GQ+  +G  P++ +++SL+ G+       +   L+  M+R+G
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            +P+VV  S LI+GL   G MDEA+   +Q  +     N   ++ALIDG  +        
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGL 505

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++  M      P+VV YT +VK L +     +A +L  ++  +   P+ + + T I G 
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C        +++   M+     P+I  YN L++   R   V+   EL+ EI K G++ +I
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYNT++ G C   +  +A +L   +    T+ +AITF I+I AYCK G++++A+ +   
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSS 685

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G   P+I++Y+ L+ G   +   + AF   +KML + + PN  ++++L+  L
Sbjct: 686 MLERGP-EPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGL 740



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/560 (27%), Positives = 272/560 (48%), Gaps = 13/560 (2%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           ++  +D    L   M  +G+     ++  +IN   R G  E+   +F      G+K  V 
Sbjct: 287 KELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVV 346

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           I++ I+DA +          +Y+ M ++G+ PNV TY+IL+  LC+N RV  A  +  ++
Sbjct: 347 IFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI 406

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKI 181
             +G  P  ++Y++++   CK   + +   L    +R G    V V + LINGL ++  +
Sbjct: 407 LKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMM 466

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +EA     + V RG+  N   ++ +I     +      L +   M +    P++ ++T L
Sbjct: 467 DEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVL 526

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +KG    GR  EA  L+ +++++GF P+ + Y TLI G C        + +   M+ N  
Sbjct: 527 VKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGI 586

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P++  Y+ LI+ F + G +    ++   +I  G  P++V Y  M+   C   +F +A  
Sbjct: 587 FPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIK 646

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L E +      PN +TF   I   C  GR+D AM +   M +    PNI TY+ L+DG  
Sbjct: 647 LFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYF 706

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE---AFQ-LLGKMLIEGTK 477
           +    + AFEL  ++    +  NIV+Y+ ++ G+C+ G++ E   AFQ  +G+ L+    
Sbjct: 707 KTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLP--- 763

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D I + I+I  YCK G++  A+ L D +   G    D++      +G  +S     + +
Sbjct: 764 -DVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTV 822

Query: 538 YLQKMLNEGICPNFATWNVL 557
           + +  LN  +CP  +  ++L
Sbjct: 823 FPESPLNLLVCPVSSMGDIL 842



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 263/539 (48%), Gaps = 6/539 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
               M   G S +   F ++IN Y +    ++A  ++  + E G+ P + IY+ +++ L 
Sbjct: 262 FFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLF 321

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    N ++S     G++ +V  ++ ++ A  +   +  A ++   M  +G +P+ V
Sbjct: 322 RAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVV 381

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ +++ +C+ G+V EA     + L       V  Y++LI+G CK   + + F L   M
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G  P+V+  S +I+ L   G ++ +L    Q   RG   N + F +L+ G     RT
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +   ++  M     +P+VV Y+ L+ GL   G +DEA+++ +Q+ +    P+   Y  L
Sbjct: 502 RDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTL 561

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDGF K  +     QI+  M SNG  P++  Y  ++ +  +         L+ ++     
Sbjct: 562 IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGL 621

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ VT+NT I G C       A+KL + +K     PN  T+  L+D   +  R+ +A  
Sbjct: 622 EPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAML 681

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           + + + + G + NI+TY+ ++ G  +      AF+L  KML +    + ++++I+I   C
Sbjct: 682 IFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLC 741

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           K+G +  A  L  +   G    PD+I+Y  L+ G C  G + EA +    ML  GI P+
Sbjct: 742 KKGLMEEA-SLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 203/429 (47%), Gaps = 32/429 (7%)

Query: 161 FGSGVS-VYNALINGLCKEHKIEEAF----WL-----------LCEMVDRGIDPNVI--- 201
           +GS  S VY+ L++  C+   ++ A     W+             EM+D  ID + I   
Sbjct: 135 YGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 202 ------------TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
                        Y  + +S    G VE  L     +  RG  P I     +LKG  +G 
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGN 254

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +   ASD ++ M+R G  PN+V +STLI+  C    +DEA S+   M E    P++  YS
Sbjct: 255 QIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYS 314

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI+G  +AG L   + +++  ++ G   +VV ++ ++    +     +A  +  +M  E
Sbjct: 315 ILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE 374

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN VT++  I GLC  GRV  A  +  Q+ +    P++ TY+ L+DG  +   +++ 
Sbjct: 375 GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDG 434

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           F L   + + G   ++V  + +++G+ R GM+ EA +   + +  G  L+   FN +I  
Sbjct: 435 FGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDG 494

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +  + +++   + G  +  PD+++YT L+ G+   G + EA     ++L +G  P
Sbjct: 495 CFRLKRTRDGLKMY-ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSP 553

Query: 550 NFATWNVLV 558
           +   +  L+
Sbjct: 554 DHIIYCTLI 562



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 31/319 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L E+  +D    L  Q+  +G S    ++ ++I+ + +       L++F  ++  G
Sbjct: 526 LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNG 585

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P + IYN +++    E     +  +   + + G+EP++ TYN ++   C       A 
Sbjct: 586 IFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAI 645

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL   +      P+A+++T ++ + CK G                              +
Sbjct: 646 KLFEVLKCGRTQPNAITFTILIDAYCKDG------------------------------R 675

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A  +   M++RG +PN++TYS +I       N E++  +  +M     +PNI S++ 
Sbjct: 676 MDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSI 735

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G   EAS  +   I    LP+V+AY  LI G C  G + EA+ +   M  N 
Sbjct: 736 LIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNG 795

Query: 301 CPPNVTTYSALID-GFAKA 318
             P+     AL + GF  +
Sbjct: 796 IMPDDLLQKALAEYGFQDS 814


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 284/588 (48%), Gaps = 42/588 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+  GV  S      +     RVG      K+F  +   G +P    ++ I+    
Sbjct: 218 ILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFC 277

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    +   +   M +   EPN F YNI++ A C   R   A      M  +GC P  V
Sbjct: 278 RKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVV 337

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ T++++ CK G V EAR+L      M F     +YN L+NG  K  +I++A  L  EM
Sbjct: 338 TFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 397

Query: 192 VDRGIDPNVITYSTIISS-----------------------------------LCDVGNV 216
             +GI P+ IT++ ++S                                    LC  G +
Sbjct: 398 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 457

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M  +G +P+I +F S++  Y   G   +A + +  M+  G  P+    S+L
Sbjct: 458 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 517

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GL  NG + EA  +  QM E     N   ++ L+D F K G+++GA  +W  M   G 
Sbjct: 518 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 577

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VVA++  +  L +  +  +A+++  +M  +   PN   +N+ I G C CG+++ A+K
Sbjct: 578 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 637

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L   M+    LP+I T N ++ GL +  R++ A  +  ++ + G+  +I+TYNT+++G C
Sbjct: 638 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 697

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +A  +V A  L+ +M   G+  D  T+NI I+ +C   ++N A+ +LD +   G   P+ 
Sbjct: 698 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG-IVPNT 756

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++Y S+L G+C S  +  A I   ++L     PN  T N+L+   +  
Sbjct: 757 VTYNSMLNGVC-SDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQ 803



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 208/428 (48%), Gaps = 6/428 (1%)

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           RE+ +R   SGV++   L   L +       + L  +++ RG  P   T+S II   C  
Sbjct: 223 REVGVRPSASGVAI---LFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRK 279

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +     +L  M    C PN  ++  ++    + GRT +A   +N MI  G  P VV +
Sbjct: 280 GCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTF 339

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +T+I+  C  G++ EA  +   ++E    PN   Y+ L++G+ K   +  A+ ++  M  
Sbjct: 340 NTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRK 399

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G +P+ + +  +V    +         L++ ++     P+   F+  + GLC  GR+D 
Sbjct: 400 KGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDE 459

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM+ L  M +    P+I  +N ++    +     +AFE    +   G+  +  T +++L 
Sbjct: 460 AMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLM 519

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+   G + EA +L+G+M+ +G  ++ + F +++  + K+G V  A  L   +   G + 
Sbjct: 520 GLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF- 578

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           PD++++++ + G+   G ++EA+    +ML +G+ PN   +N L+   F   G L     
Sbjct: 579 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICG-FCKCGKLNEALK 637

Query: 574 LDDIMANK 581
           L+ +M ++
Sbjct: 638 LEKVMRHR 645



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 166/352 (47%), Gaps = 8/352 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D     L  M  +G+S S   F SVI +Y + GL ++A + +  +  FGL P+    +
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 515

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L    R      +   M   G+  N   + +LL    K   V GA  L  EM  +
Sbjct: 516 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 575

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEA 184
           G  PD V+++  +  + K G VEEA  +    +R G       YN+LI G CK  K+ EA
Sbjct: 576 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 635

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M  RG+ P++ T + II  LC  G + +++ +   M   G +P+I ++ +L+ G
Sbjct: 636 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 695

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y        A +L NRM   G  P++  Y+  IHG CS+  M+ AV +  ++      PN
Sbjct: 696 YCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPN 755

Query: 305 VTTYSALIDGFAKAGNLLGASQIWN-RMISNGCSPNVVAYTCMVKVLCQNNM 355
             TY+++++G     ++L  + I   R++     PNVV    ++    +  M
Sbjct: 756 TVTYNSMLNGV--CSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGM 805



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 135/270 (50%), Gaps = 9/270 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K  ++ ++ G Q L  +M+  G+      F + I+   + GL E+A  +F  +   G
Sbjct: 552 LLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG 611

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++       + +    +   M+  G+ P++FT N+++  LCK  R+  A 
Sbjct: 612 LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 671

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSG----VSVYNALINGL 175
            + ++M   G +PD ++Y T+++  CK   +  A  L  R + SG    ++ YN  I+G 
Sbjct: 672 NVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 731

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETSLGILGQMFVRGCNPN 234
           C   ++  A  +L E+V  GI PN +TY+++++ +C D+  ++ ++ +  ++      PN
Sbjct: 732 CSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSDI--LDRAMILTARLLKMAFVPN 789

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           + +   LL  +   G   E + +W   + E
Sbjct: 790 VVTANLLLSQFYKQGMP-ERTLMWGHKLSE 818


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 162/541 (29%), Positives = 276/541 (51%), Gaps = 17/541 (3%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A  +F  + +    P +  +N +L A+    R+  +  +Y  M   G+ P+  T NIL+
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFG 162
              C  N+VD    +L EM  +G +P+ V++T++V  +C   ++ EA     + + M + 
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG------IDPNVITYSTIISSLCDVGNV 216
             V  Y  L+NGLC       A  L  EM++        I PN++ Y TII SLC  G +
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +    +  +M  RG +P++ +++S++ G    GR   A  L+N M+ EG  PNVV ++ L
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC  G M+EA  +   M +    P+  TY+ LIDGF   G +  A  ++  M S G 
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             + V+Y  ++   C++    +A  L  +M  +   P  +T+NT + GL   G+V  A  
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  +MK ++  P   TYN LLDGL + N + EA EL   +E    Q +I  +N ++ G+C
Sbjct: 435 LFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLC 494

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +A  +  A +L  ++  EG + + IT+ ++I+  CK G++ NA  L   +   G   P++
Sbjct: 495 KARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG-CAPNL 553

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL-----FSNLGHLGPV 571
           +++ +L+ G C +  MQ+    LQ+M  +   P+ +T +++V  L     +    HL P 
Sbjct: 554 VTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPT 613

Query: 572 Y 572
           +
Sbjct: 614 F 614



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/494 (27%), Positives = 249/494 (50%), Gaps = 12/494 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F +++ +  ++      + ++ R+   GL P     N +++     N+      +   M 
Sbjct: 95  FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G  PN  T+  L+K LC  +R+  A  LL +M   G  P+ V+Y T+++ +C  G   
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214

Query: 153 EARELAMRF-----GSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            A +L         G GV++      Y  +I+ LCK+  I++   L  EM  RGI P+V+
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            YS+II  +C  G  E + G+  +M   G +PN+ +F  L+      G+  EA+ L   M
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM 334

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I+ G  P+   Y+TLI G C  G +D+A  +   ME      +  +Y+ LI+G+ K+G +
Sbjct: 335 IQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
           + A +++  M+     P V+ Y  ++  L +      A +L  +M   +  P + T+N  
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNIL 454

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GLC    +  AM+L   ++ ++  P+I  +N L+DGL +  +++ A EL   +   G+
Sbjct: 455 LDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGL 514

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N++TY  ++HG+C++G +  A  L   M  +G   + +TFN ++  +C+  ++   ++
Sbjct: 515 EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVE 574

Query: 502 LLDRIRGGGEWNPD 515
           LL  +    +++PD
Sbjct: 575 LLQEM-AEKDFSPD 587



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/463 (30%), Positives = 232/463 (50%), Gaps = 26/463 (5%)

Query: 132 APDAVSYTTIVSSICKLGQVEEARELA-------MRFGSGVSVYNALINGLCKEHKIEEA 184
           APD       + S CK G ++ +   +       M+    +S +N L+  + K  +  + 
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M   G+ P+ IT + +I+  C++  V+  L +LG+M  RG +PN  +FTSL+KG
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN----- 299
             LG R  EA+ L  +M+R G+ PNVV Y TL++GLC  G+   AV +  +M        
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231

Query: 300 -SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
            +  PN+  Y  +ID   K G +    +++  M   G SP+VVAY+ ++  +C    +  
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  L  +M  E   PN VTFN  I  LC  G+++ A  LL  M Q    P+  TYN L+D
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G     R+ +A +L   +E  GI+ + V+YN +++G C++G +VEA +L  +M+ +    
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP 411

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             IT+N ++    ++GKV +A  L   ++   +  P+  +Y  LL G+C +  + EA   
Sbjct: 412 TVITYNTLLTGLFREGKVRDAWNLFGEMK-VHDLTPESCTYNILLDGLCKNNHLSEAMEL 470

Query: 539 LQKMLNEGICPNFATWNVLV------------RSLFSNLGHLG 569
              + N    P+   +N L+            R LF+ L H G
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEG 513



 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 251/506 (49%), Gaps = 11/506 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M + G++        +IN Y  +   +  L +   +   G  P    +  ++  L 
Sbjct: 114 LYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLC 173

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM--GNKG---- 130
             +R S    +   M R G  PNV TY  LL  LC       A KL  EM  GN G    
Sbjct: 174 LGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVT 233

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAF 185
             P+ V Y TI+ S+CK G +++ +EL +   G G+S     Y+++I+G+C   + E A 
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EMVD G+ PNV+T++ +I +LC  G +E +  +L  M  RG +P+  ++ +L+ G+
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L GR  +A DL+  M  +G   + V+Y+ LI+G C +G M EA  +  +M      P V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ L+ G  + G +  A  ++  M  +  +P    Y  ++  LC+NN   +A  L   
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +   +  P+   FN  I GLC   +++ A +L +++      PN+ TY  ++ GL +  +
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           ++ A +L   +E+ G   N+VT+NT++ G C+   + +  +LL +M  +    DA T +I
Sbjct: 534 LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGE 511
           ++    K  K    + LL      G+
Sbjct: 594 VVDLLSKDEKYREYLHLLPTFPAQGQ 619



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 179/363 (49%), Gaps = 5/363 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ID  + L  +MK  G+S     + S+I+     G  E A  +F  + + G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++DAL    +    N +   M + G  P+ FTYN L+   C   R+D A 
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L V M +KG   DAVSY  +++  CK G++ EA++L            V  YN L+ GL
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +E K+ +A+ L  EM    + P   TY+ ++  LC   ++  ++ +   +      P+I
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F  L+ G     +   A +L+NR+  EG  PNV+ Y+ +IHGLC +G ++ A  +   
Sbjct: 484 QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLG 543

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE  C PN+ T++ L+ GF +   +    ++   M     SP+    + +V +L ++  
Sbjct: 544 MEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603

Query: 356 FHQ 358
           + +
Sbjct: 604 YRE 606


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 256/517 (49%), Gaps = 6/517 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++AL  F R+      P+   +N +L ++      S +  +   M   G+ P+V+T  I+
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + +LC  NRVD A+  L ++   G  PDA ++TT++  +C  G++ EA  L  +     F
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      PNV+ +ST+I SLC    V  +  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  +M  +G +PNI ++ SL+ G          + L N M+    +P+V   +T++  LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M      PNV TY+AL+DG      +  A ++++ M+   C  NV+
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   C+     +A  L E+M+ +   PNTVT+NT I GLC  GR+  A+ L  +M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P++ TY  L D L +   + +A  L+  IE      +I  Y TIL G+CRAG +
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  L   +  +G + +  T+NI+I+  CKQG +  A +L   +   G  +P+  +Y  
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG-CSPNDCTYNL 530

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +  G   +         L++ML  G   + +T  +LV
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 243/492 (49%), Gaps = 5/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM   G+         VINS   +   + A     +I + G +P    +  ++  L 
Sbjct: 92  LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G +PNV TY  L+  LCK      A +LL  M    C P+ V
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            ++T++ S+CK  QV EA  + +     G+S     YN+LI+GLCK  + +    L+ EM
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           VD  I P+V T +T++ +LC  G V  +  ++  M  RG  PN+ ++ +L+ G+ L    
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +++ M+ +  + NV++Y+TLI+G C   S+D+A+ +  +M      PN  TY+ L
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G    G L  A  +++ M++ G  P++V Y  +   LC+N    +A +L++ +   N 
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   + T + G+C  G ++ A  L   +      PN+ TYN ++ GL +   + EA +
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L +E+ K G   N  TYN I  G  R    +   +LL +ML  G  +D  T  +++    
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 492 KQGKVNNAIQLL 503
             G   +  Q+L
Sbjct: 572 DDGLDQSVKQIL 583



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 204/391 (52%), Gaps = 5/391 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M  EG   +   + ++IN   +VG    A+++   + +   +P V +++ ++D+L
Sbjct: 161 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSL 220

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + + +    I+S M   G+ PN+ TYN L+  LCK         L+ EM +    PD 
Sbjct: 221 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 280

Query: 136 VSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
            +  T+V ++CK G V EA ++  M    GV      YNAL++G C  ++++ A  +   
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV +    NVI+Y+T+I+  C + +V+ ++ +  +M  +   PN  ++ +L+ G    GR
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A  L++ M+  G +P++V Y TL   LC N  +D+A+++   +E ++  P++  Y+ 
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++DG  +AG L  A  +++ + S G  PNV  Y  M+  LC+  +  +A  L  +M    
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           C PN  T+N   +G          ++LL++M
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEM 551



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 193/384 (50%), Gaps = 1/384 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA      M+ +   P+ + ++ +++S+    +  T L +  QM   G  P++++   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++       R   A     ++++ G  P+   ++TLI GLC  G + EA+ +  +M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV TY  LI+G  K GN   A ++   M    C PNVV ++ ++  LC++    +A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           ++  +M  +   PN VT+N+ I GLC          L+++M   + +P++ T N ++D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +   V EA ++V  +   G++ N+VTYN ++ G C    V  A ++   M+ +    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           I++N +I  YCK   V+ A+ L + +    E  P+ ++Y +L+ G+C+ G +Q+A     
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEM-SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
           +M+  G  P+  T+  L   L  N
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKN 433



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 139/274 (50%), Gaps = 1/274 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++DEA+S   +M     PP+   ++ L+   AK  +      +  +M S G  P+V    
Sbjct: 50  TLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 109

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC  N    A S + K+      P+  TF T I+GLC  G++  A+ L D+M   
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+ TY  L++GL +V     A  L+  +E+   Q N+V ++T++  +C+   V EA
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           F +  +M+ +G   + +T+N +I+  CK  +  +   L++ +    +  PD+ +  +++ 
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDVFTLNTVVD 288

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +C  G + EA   +  M++ G+ PN  T+N L+
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 1/208 (0%)

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           N   +A S   +M  +  PP+TV FN  +  +         + L  QM  +   P++ T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             +++ L  +NRV  AF  + +I K G Q +  T+ T++ G+C  G + EA  L  KM+ 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           EG + + +T+  +I   CK G  + AI+LL R    G   P+++ +++L+  +C    + 
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           EAF    +M+ +GI PN  T+N L+  L
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGL 255



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 5/193 (2%)

Query: 372 PPN--TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           PP   + + NTF         +D A+   ++M   +  P+   +N LL  + +       
Sbjct: 30  PPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTL 89

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L  +++  GI  ++ T   +++ +C    V  AF  L K+L  G + DA TF  +I  
Sbjct: 90  LSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRG 149

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC- 548
            C +GK+  A+ L D++ G G + P++++Y +L+ G+C  G    A I L + + +G C 
Sbjct: 150 LCVEGKIGEALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTSAA-IRLLRSMEQGNCQ 207

Query: 549 PNFATWNVLVRSL 561
           PN   ++ L+ SL
Sbjct: 208 PNVVVFSTLIDSL 220



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 72/152 (47%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    LL+ ++         ++ ++++   R G  E A  +F  +   GL+P V  YN
Sbjct: 435 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 494

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  +   +  + ++S M ++G  PN  TYN++ +   +NN      +LL EM  +
Sbjct: 495 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           G + D  + T +V  +   G  +  +++  ++
Sbjct: 555 GFSVDVSTTTLLVGMLSDDGLDQSVKQILCKY 586


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 167/566 (29%), Positives = 286/566 (50%), Gaps = 48/566 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  E++   ++ + M+ +GVS    +F + IN++ + G  E A+++F+ + + G
Sbjct: 218 LLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG 276

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN+++  L               M +DG+   + TY++L+  L K  + + A 
Sbjct: 277 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 336

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
            +L E   KG  P+ V Y T++   CK+G + +A  L +R G  VS          N++I
Sbjct: 337 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA--LRIR-GDMVSKGINPNSVTLNSII 393

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G CK  ++E+A  +L EM+ RG   N   ++TII  LC     E++L  L +M +R   
Sbjct: 394 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMR 453

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN    T+L+ G    G+  +A +LW R++ +GF  N+V  + LIHGLC  G+M EAV +
Sbjct: 454 PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRL 513

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M E     +  TY+ LI G  K G +    ++   M+  G  P+             
Sbjct: 514 LKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPD------------- 560

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                                 T T+N  I G+C  G++D A+ L ++ K  + +PN+ T
Sbjct: 561 ----------------------TFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 598

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  ++DG  + ++++E  +L TE+    ++LN V YNT++   CR G  VEAF+L   M 
Sbjct: 599 YGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMR 658

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G      T++ +I+  C  G++ +A  L+D +R  G   P+++ YT+L+ G C  G M
Sbjct: 659 SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL-PNVVCYTALIGGYCKLGQM 717

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
            +    LQ+M +  I PN  T+ V++
Sbjct: 718 DKVVNVLQEMSSYDIHPNKITYTVMI 743



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 240/487 (49%), Gaps = 5/487 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++   +G + +E V+ ++I+ Y ++G    AL++   +   G+ P     N I+    
Sbjct: 338 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 397

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      I   M   G   N   +  ++  LC N+R + A + L EM  +   P+  
Sbjct: 398 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 457

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
             TT+V  +CK G+  +A EL  R     FG+ +   NALI+GLCK   ++EA  LL +M
Sbjct: 458 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 517

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++RG   + ITY+T+IS  C  G VE    + G+M  +G  P+  ++  L+ G    G+ 
Sbjct: 518 LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKL 577

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +LWN       +PNV  Y  +I G C    ++E   +  ++   +   N   Y+ L
Sbjct: 578 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 637

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I  + + GN + A ++ + M S G  P    Y+ ++  +C       A  LI++M  E  
Sbjct: 638 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 697

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN V +   I G C  G++D  + +L +M  Y+  PN  TY  ++DG  +   +K A +
Sbjct: 698 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 757

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ E+   GI  + VTYN + +G C+ G + E F++   M  EG  LD IT+  +++ + 
Sbjct: 758 LLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQ 817

Query: 492 KQGKVNN 498
           +   + N
Sbjct: 818 QPSALTN 824



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 247/468 (52%), Gaps = 9/468 (1%)

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS----VYNALIN 173
           G ++ L    NKG  P   + T ++SS+ K  ++E++  +      GVS    +++  IN
Sbjct: 198 GVFRFL---ANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAIN 254

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             CK  K+E+A  L  +M   G+ PNV+TY+ +I  LC  GN++ +     +M   G N 
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
            + +++ L+ G +   + +EA+ +    + +GF PN V Y+TLI G C  G++ +A+ + 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M      PN  T +++I GF K G +  A  I   M+S G S N  A+T ++  LC N
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           + F  A   + +M   N  PN     T + GLC  G+   A++L  ++ +     N+ T 
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 494

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+ GL +   ++EA  L+ ++ + G  L+ +TYNT++ G C+ G V E F+L G+M+ 
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G + D  T+N++I+  C+ GK++ A+ L +  +   +  P++ +Y  ++ G C +  ++
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECK-SRDLVPNVYTYGVMIDGYCKADKIE 613

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           E      ++L + +  N   +N L+R+   N G+    + L D M +K
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRN-GNTVEAFKLHDDMRSK 660


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/517 (30%), Positives = 256/517 (49%), Gaps = 6/517 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++AL  F R+      P+   +N +L ++      S +  +   M   G+ P+V+T  I+
Sbjct: 52  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + +LC  NRVD A+  L ++   G  PDA ++TT++  +C  G++ EA  L  +     F
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      PNV+ +ST+I SLC    V  +  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  +M  +G +PNI ++ SL+ G          + L N M+    +P+V   +T++  LC
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M      PNV TY+AL+DG      +  A ++++ M+   C  NV+
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   C+     +A  L E+M+ +   PNTVT+NT I GLC  GR+  A+ L  +M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P++ TY  L D L +   + +A  L+  IE      +I  Y TIL G+CRAG +
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  L   +  +G + +  T+NI+I+  CKQG +  A +L   +   G  +P+  +Y  
Sbjct: 472 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG-CSPNDCTYNL 530

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +  G   +         L++ML  G   + +T  +LV
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 245/495 (49%), Gaps = 5/495 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM   G+         VINS   +   + A     +I + G +P    +  ++  L 
Sbjct: 92  LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 151

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G +PNV TY  L+  LCK      A +LL  M    C P+ V
Sbjct: 152 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVV 211

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            ++T++ S+CK  QV EA  + +     G+S     YN+LI+GLCK  + +    L+ EM
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           VD  I P+V T +T++ +LC  G V  +  ++  M  RG  PN+ ++ +L+ G+ L    
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +++ M+ +  + NV++Y+TLI+G C   S+D+A+ +  +M      PN  TY+ L
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G    G L  A  +++ M++ G  P++V Y  +   LC+N    +A +L++ +   N 
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   + T + G+C  G ++ A  L   +      PN+ TYN ++ GL +   + EA +
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L +E+ K G   N  TYN I  G  R    +   +LL +ML  G  +D  T  +++    
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 492 KQGKVNNAIQLLDRI 506
             G   +  Q+L +I
Sbjct: 572 DDGLDQSVKQILCKI 586



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 204/391 (52%), Gaps = 5/391 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M  EG   +   + ++IN   +VG    A+++   + +   +P V +++ ++D+L
Sbjct: 161 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSL 220

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + + +    I+S M   G+ PN+ TYN L+  LCK         L+ EM +    PD 
Sbjct: 221 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 280

Query: 136 VSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
            +  T+V ++CK G V EA ++  M    GV      YNAL++G C  ++++ A  +   
Sbjct: 281 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 340

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV +    NVI+Y+T+I+  C + +V+ ++ +  +M  +   PN  ++ +L+ G    GR
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A  L++ M+  G +P++V Y TL   LC N  +D+A+++   +E ++  P++  Y+ 
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++DG  +AG L  A  +++ + S G  PNV  Y  M+  LC+  +  +A  L  +M    
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           C PN  T+N   +G          ++LL++M
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEM 551



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 193/384 (50%), Gaps = 1/384 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA      M+ +   P+ + ++ +++S+    +  T L +  QM   G  P++++   
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++       R   A     ++++ G  P+   ++TLI GLC  G + EA+ +  +M    
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV TY  LI+G  K GN   A ++   M    C PNVV ++ ++  LC++    +A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           ++  +M  +   PN VT+N+ I GLC          L+++M   + +P++ T N ++D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +   V EA ++V  +   G++ N+VTYN ++ G C    V  A ++   M+ +    + 
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           I++N +I  YCK   V+ A+ L + +    E  P+ ++Y +L+ G+C+ G +Q+A     
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEM-SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
           +M+  G  P+  T+  L   L  N
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLCKN 433



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 139/274 (50%), Gaps = 1/274 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++DEA+S   +M     PP+   ++ L+   AK  +      +  +M S G  P+V    
Sbjct: 50  TLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 109

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC  N    A S + K+      P+  TF T I+GLC  G++  A+ L D+M   
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+ TY  L++GL +V     A  L+  +E+   Q N+V ++T++  +C+   V EA
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           F +  +M+ +G   + +T+N +I+  CK  +  +   L++ +    +  PD+ +  +++ 
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV-DSKIMPDVFTLNTVVD 288

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +C  G + EA   +  M++ G+ PN  T+N L+
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 322



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 1/208 (0%)

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           N   +A S   +M  +  PP+TV FN  +  +         + L  QM  +   P++ T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             +++ L  +NRV  AF  + +I K G Q +  T+ T++ G+C  G + EA  L  KM+ 
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           EG + + +T+  +I   CK G  + AI+LL R    G   P+++ +++L+  +C    + 
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLL-RSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           EAF    +M+ +GI PN  T+N L+  L
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGL 255



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 3/192 (1%)

Query: 372 PPN--TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           PP   + + NTF         +D A+   ++M   +  P+   +N LL  + +       
Sbjct: 30  PPPFLSSSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTL 89

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L  +++  GI  ++ T   +++ +C    V  AF  L K+L  G + DA TF  +I  
Sbjct: 90  LSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRG 149

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            C +GK+  A+ L D++ G G + P++++Y +L+ G+C  G    A   L+ M      P
Sbjct: 150 LCVEGKIGEALHLFDKMIGEG-FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 208

Query: 550 NFATWNVLVRSL 561
           N   ++ L+ SL
Sbjct: 209 NVVVFSTLIDSL 220


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 173/572 (30%), Positives = 267/572 (46%), Gaps = 52/572 (9%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKR------D 94
           R +GL + ALK+F  +       +V+ +NH+L A+      S      S+  R      D
Sbjct: 26  RSLGL-DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSD 84

Query: 95  GMEPNVFTYNIL-----------------------------------LKALCKNNRVDGA 119
            + PN+ TY+IL                                   LK LC   RV  A
Sbjct: 85  KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 120 YKLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--------AMRFGSGVSVYNA 170
             +L++ M   GC PD VSYT ++  +C   + EEA EL          R    V  Y+ 
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +ING   E ++++ + L  EM+DRGI P+V+TY+T+I  LC     + + G+  QM   G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             PN +++  L+ GYL  G+  E   +   M   G  P+   Y +L++ LC NG   EA 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
                M      P V+TY  LI G+A  G L       + M+ NG SP+   +       
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +  M  +A  +  KM      PN V +   I  LC  GRVD A    +QM      PNI
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             +N L+ GL  V++ + A ELV E+   GI  N V +NT++  +C  G V+E  +L+  
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G + DA ++  +I  YC  G+ + A ++ D +   G  +P  ++Y +LL G C++ 
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG-LSPTEVTYNTLLHGYCSAS 563

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + +A+   ++ML +G+ P   T+N ++  LF
Sbjct: 564 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 595



 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 269/563 (47%), Gaps = 8/563 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           EK   + ++ L       G  C   V  +  VIN +   G  ++   +F  + + G+ P 
Sbjct: 174 EKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPD 233

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  Y  ++D L     F     ++  M  +G +PN +TYN L+       +     ++L 
Sbjct: 234 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLE 293

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEH 179
           EM  +G  PD  +Y ++++ +CK G+  EAR   +  +R G    VS Y  LI+G   + 
Sbjct: 294 EMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            + E    L  MV+ G+ P+   ++   S+    G ++ ++ I  +M   G +PN+ ++ 
Sbjct: 354 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+      GR  +A   +N+MI EG  PN+V +++L++GLC+    + A  + Y+M + 
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 473

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PN   ++ LI      G ++   ++ + M   G  P+  +YT ++   C      +A
Sbjct: 474 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEA 533

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             + + M      P  VT+NT + G C   R+D A  L  +M +    P + TYN +L G
Sbjct: 534 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L +  R  EA EL   +   G + +I TYN IL+G+C++  V EAF++   +  +G +L+
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            ITF I+I A  K G+  +A+ L   I   G   P++++Y  +   +   G ++E     
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANG-LVPNVVTYRLVAENLIEEGSLEEFDSLF 712

Query: 540 QKMLNEGICPNFATWNVLVRSLF 562
             M   G  PN    N LVR L 
Sbjct: 713 SAMEKNGTAPNSQMLNALVRRLL 735



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 245/505 (48%), Gaps = 5/505 (0%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L++M   G+      + S++N   + G   +A   F  +   G+KP V  Y  ++ 
Sbjct: 288 VVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIH 347

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               +   S ++     M  +G+ P+   +NI   A  K   +D A  +  +M   G +P
Sbjct: 348 GYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSP 407

Query: 134 DAVSYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           + V+Y  ++ ++CKLG+V++A  +       GV+    V+N+L+ GLC   K E A  L+
Sbjct: 408 NVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELV 467

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM+D+GI PN + ++T+I +LC+VG V     ++  M   G  P+  S+T L+ GY L 
Sbjct: 468 YEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLT 527

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GRT EA  +++ M+  G  P  V Y+TL+HG CS   +D+A  +  +M      P V TY
Sbjct: 528 GRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTY 587

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++ G  +      A +++  MI++G   ++  Y  ++  LC++N   +A  + + +  
Sbjct: 588 NTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCS 647

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +    N +TF   I  L   GR + AM L   +     +PN+ TY  + + L+    ++E
Sbjct: 648 KGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEE 707

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
              L + +EK G   N    N ++  +   G +  A   L K+      ++A T ++++ 
Sbjct: 708 FDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMS 767

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWN 513
            +      ++A  L ++     E N
Sbjct: 768 IFTSDEYQHHAKSLPEKYHFLNEAN 792



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/530 (26%), Positives = 234/530 (44%), Gaps = 9/530 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D  + + QQM   G   +   +  +I+ Y  +G  ++ ++M   +   GLKP    Y  
Sbjct: 250 FDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGS 309

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+ L    R       + +M R G++P V TY IL+        +   +  L  M   G
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAF 185
            +PD   +    S+  K G +++A ++   MR       V  Y ALI+ LCK  ++++A 
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +M++ G+ PN++ +++++  LC V   E +  ++ +M  +G  PN   F +L+   
Sbjct: 430 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNL 489

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  E   L + M   G  P+  +Y+ LI G C  G  DEA  V   M      P  
Sbjct: 490 CNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTE 549

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ L+ G+  A  +  A  ++  M+  G +P VV Y  ++  L Q   F +A  L   
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M       +  T+N  + GLC    VD A K+   +       NI T+  ++  LL+  R
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            ++A +L   I   G+  N+VTY  +   +   G + E   L   M   GT  ++   N 
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI-ISYTSLLWGICNSGGMQE 534
           ++     +G ++ A   L ++    E N  +  S TSLL  I  S   Q 
Sbjct: 730 LVRRLLHRGDISRAGAYLSKL---DERNFSVEASTTSLLMSIFTSDEYQH 776



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/409 (25%), Positives = 196/409 (47%), Gaps = 7/409 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     K  +  +   L  M   G+S    +F    ++Y + G+ ++A+ +F ++R+ G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y  ++DAL    R       ++ M  +G+ PN+  +N L+  LC  ++ + A 
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 464

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +L+ EM ++G  P+AV + T++ ++C +G+V E R L +     V V      Y  LI+G
Sbjct: 465 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRL-IDLMEHVGVRPDAFSYTPLISG 523

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C   + +EA  +   MV  G+ P  +TY+T++   C    ++ +  +  +M  +G  P 
Sbjct: 524 YCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPG 583

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ ++L G     R  EA +L+  MI  G   ++  Y+ +++GLC +  +DEA  +  
Sbjct: 584 VVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQ 643

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +       N+ T++ +I    K G    A  ++  + +NG  PNVV Y  + + L +  
Sbjct: 644 SLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEG 703

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +  SL   M      PN+   N  ++ L   G +  A   L ++ +
Sbjct: 704 SLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 752



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 50/290 (17%)

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI----WNRMI---SNGCSP 338
           +D+A+ +  ++  ++ P +V  ++ L+   ++A     AS++    +NRM+   S+  +P
Sbjct: 30  LDDALKLFDELLHHARPASVRAFNHLLTAVSRA-RCSSASELAVSHFNRMVRECSDKVAP 88

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           N+  Y+ ++   C+  M H  H                 F   +K         W M  +
Sbjct: 89  NLCTYSILIGRFCR--MGHLEHGF-------------AAFGLILK-------TGWRMDHI 126

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFE-LVTEIEKCGIQLNIVTYNTILHGVCR 457
                          N+LL GL    RV EA + L+  + + G   + V+Y  +L G+C 
Sbjct: 127 -------------AINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCN 173

Query: 458 AGMVVEAFQLLGKMLIEGTKL---DAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWN 513
                EA +LL  M  +  +    + ++++I+I  +  +G+V+    L L+ I  G    
Sbjct: 174 EKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRG--IP 231

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           PD+++YT+++ G+C +     A    Q+M++ G  PN  T+N L+    S
Sbjct: 232 PDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLS 281


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 260/526 (49%), Gaps = 13/526 (2%)

Query: 49  ALKMFYRIREFG---LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+  + R+   G   + PTV  Y  ++       R  +      N+ + G      T+  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 106 LLKALCKNNRVDGAYKL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMR 160
           LLK LC + R   A  + L  M    C PD  S T ++  +C   + +EA EL    A  
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187

Query: 161 FGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            G G    V  Y  +ING  KE   ++A+    EM+DR I P+V+TYS+II++LC    +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++ +L  M   G  PN  ++ S+L GY    +  EA     +M  +G  P+VV Y++L
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSL 307

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  LC NG   EA  +   M +    P++ TY  L+ G+A  G L+    + + M+ NG 
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+   +  ++    +     +A  +  KM      PN VT+   I  LC  G VD AM 
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
             +QM      PNI  Y  L+  L   ++  +A EL+ E+   GI LN + +N+I+H  C
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHC 487

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G V+E+ +L   M+  G K + IT++ +I  YC  GK++ A +LL  +   G   PD 
Sbjct: 488 KEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG-MKPDC 546

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++Y +L+ G C    M +A    ++M++ G+ PN  T+N++++ LF
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 261/551 (47%), Gaps = 44/551 (7%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD---GMEPNVFTYNILLKALC 111
           R+ E    P V     +L  L  ENR      +   M  D   G  P+V +Y  ++    
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS---- 166
           K    D AY    EM ++  +PD V+Y++I++++CK   +++A E L     +GV     
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +  I   M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG  P+I ++ +LL+GY   G   E   L + M+R G  P+   ++ LI        +
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV 387

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           DEA+ V  +M ++   PNV TY A+I    K+G++  A   + +MI  G +PN++ YT +
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447

Query: 347 VKVLCQNNMFHQAHSLIEKM---------------AFENCP------------------- 372
           +  LC  + + +A  LI +M                  +C                    
Sbjct: 448 IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507

Query: 373 -PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T++T I G C  G++D A KLL  M      P+  TYN L++G  RV+R+ +A  
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+   G+  NI+TYN IL G+        A +L   +   GT+L+  T+NII++  C
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K    + A+++   +    +   +  ++  ++  +   G   EA      +   G+ P+ 
Sbjct: 628 KNNLTDEALRMFQNL-CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 686

Query: 552 ATWNVLVRSLF 562
            T++++  +L 
Sbjct: 687 RTYSLMAENLI 697



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 214/423 (50%), Gaps = 16/423 (3%)

Query: 152 EEAR---ELAMRFGSGVSVY---NALINGLCKEHKIEEAFWLLCEMVDRG---IDPNVIT 202
           E+AR   E  +R G G S+Y    AL +     H    A      M   G   + P V T
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALAD--VARHSPAAAVSRYNRMARAGAGKVTPTVHT 89

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y  +I   C  G ++     LG +  +G      +FT LLKG     RT +A D+   RM
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSALIDGFAKA 318
                +P+V + + L+ GLC      EA+ + + M ++      P+V +Y+ +I+GF K 
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+   A   ++ M+    SP+VV Y+ ++  LC+     +A  ++  M      PN +T+
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N+ + G C   +   A+  L +M+     P++ TYN L+D L +  R  EA ++   + K
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G++ +I TY T+L G    G +VE   LL  M+  G   D   FNI+I AY KQ KV+ 
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ +  ++R  G  NP++++Y +++  +C SG + +A +Y ++M++EG+ PN   +  L+
Sbjct: 390 AMLVFSKMRQHG-LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 559 RSL 561
            SL
Sbjct: 449 HSL 451



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 237/475 (49%), Gaps = 5/475 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L++M+ +GV      + S+++   + G + +A K+F  + + GL+P +  Y  +L    
Sbjct: 288 FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYA 347

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +     ++ +   M R+G+ P+   +NIL+ A  K  +VD A  +  +M   G  P+ V
Sbjct: 348 TKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVV 407

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++  +CK G V++A     + +       + VY +LI+ LC   K ++A  L+ EM
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +DRGI  N I +++II S C  G V  S  +   M   G  PN+ ++++L+ GY L G+ 
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ L + M   G  P+ V Y+TLI+G C    MD+A+++  +M  +   PN+ TY+ +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G         A +++  +  +G    +  Y  ++  LC+NN+  +A  + + +   + 
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDL 647

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              T TFN  I  L   GR D A  L   +     +P++ TY+ + + L+    ++E  +
Sbjct: 648 QLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDD 707

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           L   +E+ G   N    N+I+  + + G +  A   L  +  +   L+A T +++
Sbjct: 708 LFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 232/494 (46%), Gaps = 5/494 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +L  M   GV  +   + S+++ Y      ++A+    ++R  G++P V  YN 
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L    R +    I+ +M + G+EP++ TY  LL+       +   + LL  M   G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAF 185
             PD   +  ++ +  K  +V+EA  +   MR       V  Y A+I  LCK   +++A 
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +M+D G+ PN+I Y+++I SLC     + +  ++ +M  RG   N   F S++  +
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  E+  L++ M+R G  PNV+ YSTLI G C  G MDEA  +   M      P+ 
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LI+G+ +   +  A  ++  M+S+G SPN++ Y  +++ L        A  L   
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +          T+N  + GLC     D A+++   +   +      T+N ++  LL+V R
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             EA +L   +   G+  ++ TY+ +   +   G++ E   L   M   G   ++   N 
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 726

Query: 486 IIYAYCKQGKVNNA 499
           I+    ++G +  A
Sbjct: 727 IVRKLLQRGDITRA 740


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 269/531 (50%), Gaps = 33/531 (6%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F +++    +  + + A  M+ ++   G++P++  +N +++ L  + R      I S++ 
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R    PN FTY  L+   C+N+ +D A+ +   M   GC P++V+Y+T            
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYST------------ 277

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                             LINGLC E ++EEA  +L EMV +GI+P V TY+  + SLCD
Sbjct: 278 ------------------LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G    ++ +LG+M  RGC PNI +FT+L+ G    G+   A  L+++M+ +G +P  V 
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ LC  G  + A ++   M  +   P+  TY+ +I  F   G++  A  I+++M+
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G SPNV+ Y  ++   C+    + A  L+E M      P+  T+   I G    G+++
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  L   M ++   PN  TY  ++DG   + +V +A  L  ++ + G   +  TYN ++
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G  +   + EA    GKM+ +G   + IT+   I   C+ G+   A ++   +     +
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN-Y 618

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIY--LQKMLNEGICPNFATWNVLVRSL 561
            P++ +Y+SL++G+C  G  ++A +Y  L ++ + G  PN  T+  LV+ L
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 162/601 (26%), Positives = 283/601 (47%), Gaps = 43/601 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           +LG+   +D  + +  +M   G+  S   F ++IN   + G  ++A  +   I  +   P
Sbjct: 176 QLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP 235

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               Y  ++      +   +   ++  M +DG +PN  TY+ L+  LC   R++ A  +L
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKE 178
            EM  KG  P   +YT  + S+C  G   EA EL  +         +  + ALI+GL ++
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            K E A  L  +M+  G+ P  +TY+ +I+ LC  G  ET+  I   M   G  P+  ++
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++K + L G   +A  ++++M++ G  PNV+ Y+TLI+G C  G+++ A+ +   M+ 
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC------------- 345
           N   P+  TY+ LI GF++ G L  A+ ++  M+ +G SPN V YT              
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 346 ----------------------MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
                                 M+    + N   +A +   KM  +   PN +T+ +FI 
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA--FELVTEIEKCGI 441
           GLC  GR   A K+  +M++    PN+ TY+ L+ GL +  R ++A  + L+  +   G 
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+ TY T++ G+C  G   EA QL+  M  +G +     +  ++   CK  KV +A+ 
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   +   G +   +  Y +L+  +C    ++EA    Q ML +    +   W VL+  L
Sbjct: 716 IFYSMDTLG-FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774

Query: 562 F 562
            
Sbjct: 775 L 775



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 173/603 (28%), Positives = 281/603 (46%), Gaps = 43/603 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +K  +   + ++  +       +   + S+I  + R    + A  MF R+ + G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y+ +++ L +E R      +   M + G+EP V+TY I L +LC       A 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           +LL +M  +GC P+  ++T ++S + + G+ E A     + LA         YNALIN L
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 176 CKEHKIEEAF----WLLC-------------------------------EMVDRGIDPNV 200
           C E + E AF    W+L                                +M+  G  PNV
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ITY+T+I   C  GN+  ++ +L  M   G  P+  ++T L+ G+  GG+   A+ L+  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G  PN V Y+ +I G  +   +D+A+++ ++M E+   P+  TY+ +I GF+K  +
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A     +M+  G  PNV+ YT  +  LC+N     A  +  +M   N  PN  T+++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 381 FIKGLCGCGRVDWA--MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            I GLC  GR + A    LL ++  Y C PN+ TY  L+ GL    R  EA +LV  ++K
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+Q +   Y  +L G C+   V  A  +   M   G +L    +  +I A CK+  +  
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A Q + +      WN D +++T LL G+   G        L  M +     NF T+ +L 
Sbjct: 748 A-QCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLA 806

Query: 559 RSL 561
           R L
Sbjct: 807 REL 809



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 179/362 (49%), Gaps = 1/362 (0%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           +++T++  L     V+ +  +  +M   G  P++ +F +++      GR  EA  + + +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            R    PN   Y++LI G C N ++D A ++  +M ++ C PN  TYS LI+G    G L
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +   M+  G  P V  YT  +  LC      +A  L+ KM    C PN  TF   
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GL   G+ + A+ L  +M     +P   TYN L++ L    R + AF +   +   G 
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             +  TYN I+   C  G + +A  +  KML  G+  + IT+N +IY YCKQG +NNA++
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL+ ++G G   PD  +YT L+ G    G ++ A      M+  GI PN  T+  ++   
Sbjct: 469 LLEIMKGNG-LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 562 FS 563
           F+
Sbjct: 528 FN 529



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 216/515 (41%), Gaps = 85/515 (16%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C  + V+ LL +MK  G   +   F ++I+   R G  E A+ +++++   GL PT   Y
Sbjct: 322 CSSEAVE-LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 69  NHILDALLAENRFS--------MINP---------------------------IYSNMKR 93
           N +++ L  E RF         M++                            I+  M +
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            G  PNV TYN L+   CK   ++ A +LL  M   G  PDA +YT ++S   + G++E 
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 154 AREL---AMRFG-------------------------------------SGVSVYNALIN 173
           A  L    M  G                                          YN +I+
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K + I EA     +MV +G+ PNVITY++ I  LC  G    +  I  +M  R   P
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP 620

Query: 234 NIHSFTSLLKGYLLGGRTHEAS--DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           N+++++SL+ G    GR  +A   +L  R+   G  PNV  Y+TL+ GLC  G   EA  
Sbjct: 621 NLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQ 680

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   M++    P+   Y AL+ G  K   +  A  I+  M + G   ++  Y  ++  LC
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC 740

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           + N   +A  + + M  ++   + V +   + GL   G  D  +KLL  M+   C  N  
Sbjct: 741 KENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQ 800

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
           TY       + + R   A +   +I +   QL IV
Sbjct: 801 TY-------VMLARELSALDCAIKIPQISQQLGIV 828



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%)

Query: 425 RVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            VK   + ++EI  K      + ++ T+L  + +  MV  A  +  KML  G +   +TF
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTF 205

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N +I   CK+G+V  A  ++  I     + P+  +YTSL+ G C +  +  AF    +M+
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAY-PNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 544 NEGICPNFATWNVLVRSLFS 563
            +G  PN  T++ L+  L S
Sbjct: 265 KDGCDPNSVTYSTLINGLCS 284


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 251/525 (47%), Gaps = 37/525 (7%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A QA + F+ +      P +  + H+L  L     +S +  +Y+ M+  G+ P+  T NI
Sbjct: 77  ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           LL  LC  NRV     ++  +  +G  PD V+YTT                         
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTT------------------------- 171

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
                LI GLC EH+I +A  L   M   G  PN ITY T++  LC  GN+  +L +  +
Sbjct: 172 -----LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQE 226

Query: 226 MF----VRGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           M     + G N  P + S++ ++       R  EA DL+  M  +G  P V++Y++LIHG
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHG 286

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C  G  +EA  +  +M      PNV T++ LID   K G ++ A  +   MI  G  PN
Sbjct: 287 FCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 346

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           ++ Y  +++  C     + A  L   M  + C P+ + +   I G C   +V+ AMKL +
Sbjct: 347 LLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 406

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M Q    P++ TY  LL GL +  +V +A +L   ++  GI  ++  Y   L+G+C+ G
Sbjct: 407 GMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 466

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA +L  K+     KLD   FN +I   CK GK+  A +L +++    E  PD+++Y
Sbjct: 467 CLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQE-ELQPDVVTY 525

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             ++   C  G + +A I  QKM   G  P+  T+  L+R  F +
Sbjct: 526 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 570



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 244/482 (50%), Gaps = 11/482 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++   ++    Q   ++ ++R  G+ P     N +L+ L   NR      + + + 
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G  P++ TY  L+K LC  +R+  A  L   M   GC P+A++Y T++  +C+ G + 
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218

Query: 153 EAREL-----------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            A +L            + F   V  Y+ +I+ LCK+ + +EA  L  EM  +G+ P VI
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           +Y+++I   C  G  E +  +  +M  +G  PN+ +F  L+      G+  EA DL   M
Sbjct: 279 SYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 338

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I+ G +PN++ Y++LI G C  G ++ A  +   M    C P+V  Y+ LI+G+ K   +
Sbjct: 339 IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKV 398

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A +++N M+  G  P+V  Y  ++  L Q      A  L   M     P +   +  F
Sbjct: 399 EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIF 458

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GLC  G +  AM+L +++K Y    +I  +N L+DGL +  +++ A+EL  ++ +  +
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           Q ++VTYN ++H  CR G VV+A  L  KM   G   D IT+  +I  + +  K+   ++
Sbjct: 519 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVE 578

Query: 502 LL 503
           LL
Sbjct: 579 LL 580



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 244/480 (50%), Gaps = 17/480 (3%)

Query: 14  VQYLLQQMKVEGVS---CSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           V YL  QM++ G+S   C+  + ++ + +  RVG   + L +   I   G  P +  Y  
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVG---EGLAVMAGILRRGYIPDIVTYTT 171

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L  E+R S    +++ M++ G  PN  TY  L+K LC+   +  A KL  EM N  
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231

Query: 131 C------APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
                   P  +SY+ I+ ++CK  + +EAR+L            V  Y +LI+G C   
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGG 291

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K EEA  L  EMV++G+ PNV+T++ +I  LC  G V  +  +L  M  RG  PN+ ++ 
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL++G+ L G  + A +L+  M  +G  P+V+ Y+ LI+G C    ++EA+ +   M + 
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P+V TY AL+ G  + G +  A +++  M   G   ++  Y   +  LC+N    +A
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L  K+   N   +   FN  I GLC  G+++ A +L +++ Q E  P++ TYN ++  
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             R  +V +A  L  ++EK G   + +TY T++ G   +  + +  +LL  M+     LD
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 178/345 (51%), Gaps = 5/345 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +    D  + L ++MKV+G++ +   + S+I+ +   G  E+A ++F  +   G
Sbjct: 248 IIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG 307

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  +N ++D L  E +      +   M + G+ PN+ TYN L++  C    ++ A 
Sbjct: 308 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAR 367

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS--GVSVYNALINGL 175
           +L V M +KGC PD + YT +++  CK  +VEEA +L    ++ G    V  Y AL+ GL
Sbjct: 368 ELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 427

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  K+ +A  L   M   GI  ++  Y   ++ LC  G +  ++ +  ++       +I
Sbjct: 428 FQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDI 487

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F  L+ G    G+   A +L+ ++ +E   P+VV Y+ +IH  C  G + +A  +  +
Sbjct: 488 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           ME+N C P+  TY+ LI GF ++  L    ++ + M+    S +V
Sbjct: 548 MEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 142/295 (48%), Gaps = 12/295 (4%)

Query: 274 STLIHGLCSNGSMDEAVSVSY---QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           S  +H  C  G++    +  +    M  N  PP +++++ L+ G AK  +      ++N+
Sbjct: 64  SMFLHN-CKTGNITATQAFQFFHLMMYSNPTPP-LSSFTHLLSGLAKIKHYSQVFYLYNQ 121

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  +G SP+      ++  LC  N   +  +++  +      P+ VT+ T IKGLC   R
Sbjct: 122 MRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHR 181

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI----EKCGIQLN-- 444
           +  A  L  +M++  C PN  TY  L+ GL R   +  A +L  E+       GI     
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +++Y+ I+  +C+     EA  L  +M ++G     I++  +I+ +C  GK   A +L +
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +   G   P+++++  L+  +C  G + EA   L+ M+  GI PN  T+N L+ 
Sbjct: 302 EMVNQG-VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIE 355


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/511 (30%), Positives = 254/511 (49%), Gaps = 10/511 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV  Y  ++       R  +      N+ + G      T+  LLK LC + R   A 
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 121 KL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMRFGSG----VSVYNAL 171
            + L  M    C PD  S T ++  +C   + +EA EL    A   G G    V  Y  +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTV 202

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ING  KE   ++A+    EM+DR I P+V+TYS+II++LC    ++ ++ +L  M   G 
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGV 262

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN  ++ S+L GY    +  EA     +M  +G  P+VV Y++L+  LC NG   EA  
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   M +    P++ TY  L+ G+A  G L+    + + M+ NG  P+   +  ++    
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  +  KM      PN VT+   I  LC  G VD AM   +QM      PNI 
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            Y  L+  L   ++  +A EL+ E+   GI LN + +N+I+H  C+ G V+E+ +L   M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +  G K + IT++ +I  YC  GK++ A +LL  +   G   PD ++Y +L+ G C    
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG-MKPDCVTYNTLINGYCRVSR 561

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           M +A    ++M++ G+ PN  T+N++++ LF
Sbjct: 562 MDDALALFKEMVSSGVSPNIITYNIILQGLF 592



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 261/550 (47%), Gaps = 44/550 (8%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD---GMEPNVFTYNILLKALC 111
           R+ E    P V     +L  L  ENR      +   M  D   G  P+V +Y  ++    
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS---- 166
           K    D AY    EM ++  +PD V+Y++I++++CK   +++A E L     +GV     
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +  I   M
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG  P+I ++ +LL+GY   G   E   L + M+R G  P+   ++ LI        +
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV 387

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           DEA+ V  +M ++   PNV TY A+I    K+G++  A   + +MI  G +PN++ YT +
Sbjct: 388 DEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSL 447

Query: 347 VKVLCQNNMFHQAHSLIEKM---------------AFENCP------------------- 372
           +  LC  + + +A  LI +M                  +C                    
Sbjct: 448 IHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGV 507

Query: 373 -PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T++T I G C  G++D A KLL  M      P+  TYN L++G  RV+R+ +A  
Sbjct: 508 KPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALA 567

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+   G+  NI+TYN IL G+        A +L   +   GT+L+  T+NII++  C
Sbjct: 568 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLC 627

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K    + A+++   +    +   +  ++  ++  +   G   EA        + G+ PN+
Sbjct: 628 KNNLTDEALRMFQNL-CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNY 686

Query: 552 ATWNVLVRSL 561
            T+ ++  ++
Sbjct: 687 WTYRLMAENI 696



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 214/423 (50%), Gaps = 16/423 (3%)

Query: 152 EEAREL---AMRFGSGVSVY---NALINGLCKEHKIEEAFWLLCEMVDRG---IDPNVIT 202
           E+AR +    +R G G S+Y    AL +     H    A      M   G   + P V T
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALAD--VARHSPAAAVSRYNRMARAGAGKVTPTVHT 89

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y  +I   C  G ++     LG +  +G      +FT LLKG     RT +A D+   RM
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSALIDGFAKA 318
                +P+V + + L+ GLC      EA+ + + M ++      P+V +Y+ +I+GF K 
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+   A   ++ M+    SP+VV Y+ ++  LC+     +A  ++  M      PN +T+
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N+ + G C   +   A+  L +M+     P++ TYN L+D L +  R  EA ++   + K
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G++ +I TY T+L G    G +VE   LL  M+  G   D   FNI+I AY KQ KV+ 
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ +  ++R  G  NP++++Y +++  +C SG + +A +Y ++M++EG+ PN   +  L+
Sbjct: 390 AMLVFSKMRQHG-LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 448

Query: 559 RSL 561
            SL
Sbjct: 449 HSL 451



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 247/537 (45%), Gaps = 13/537 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +L  M   GV  +   + S+++ Y      ++A+    ++R  G++P V  YN 
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L    R +    I+ +M + G+EP++ TY  LL+       +   + LL  M   G
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAF 185
             PD   +  ++ +  K  +V+EA  +   MR       V  Y A+I  LCK   +++A 
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +M+D G+ PN+I Y+++I SLC     + +  ++ +M  RG   N   F S++  +
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  E+  L++ M+R G  PNV+ YSTLI G C  G MDEA  +   M      P+ 
Sbjct: 487 CKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDC 546

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LI+G+ +   +  A  ++  M+S+G SPN++ Y  +++ L        A  L   
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +          T+N  + GLC     D A+++   +   +      T+N ++  LL+V R
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             EA +L       G+  N  TY  +   +   G++ E  QL   M   G  +D+   N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNF 726

Query: 486 IIYAYCKQGKVNNA---IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           I+    ++G++  A   + ++D      E      S  SL   + + G  QE   +L
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEA-----STASLFIDLLSGGKYQEYHRFL 778



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 227/484 (46%), Gaps = 5/484 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + S+I +  +    ++A+++   + + G+ P    YN IL    +  +          M
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM 292

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + DG+EP+V TYN L+  LCKN R   A K+   M  +G  PD  +Y T++      G +
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352

Query: 152 EEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            E     +L +R G      V+N LI    K+ K++EA  +  +M   G++PNV+TY  +
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC  G+V+ ++    QM   G  PNI  +TSL+    +  +  +A +L   M+  G 
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N + ++++IH  C  G + E+  +   M      PNV TYS LIDG+  AG +  A++
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + + M S G  P+ V Y  ++   C+ +    A +L ++M      PN +T+N  ++GL 
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R   A +L   + +      ++TYN +L GL + N   EA  +   +    +QL   
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETR 652

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T+N ++  + + G   EA  L       G   +  T+ ++      QG +    QL   +
Sbjct: 653 TFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSM 712

Query: 507 RGGG 510
              G
Sbjct: 713 EDNG 716



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 194/428 (45%), Gaps = 40/428 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G+     VF  +I +Y +    ++A+ +F ++R+ GL P V  Y  ++  L 
Sbjct: 358 LLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC 417

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M  +G+ PN+  Y  L+ +LC  ++ D A +L++EM ++G   + +
Sbjct: 418 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            + +I+ S CK G+V E+    +L +R G    V  Y+ LI+G C   K++EA  LL  M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ P+ +TY+T+I+  C V  ++ +L +  +M   G +PNI ++  +L+G     RT
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV-------SYQME------- 297
             A +L+  + + G    +  Y+ ++HGLC N   DEA+ +         Q+E       
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 298 ---------------------ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                                 N   PN  TY  + +     G L    Q++  M  NGC
Sbjct: 658 IGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGC 717

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + +      +V+ L Q     +A + +  +  ++      T + FI  L G    ++   
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKYQEYHRF 777

Query: 397 LLDQMKQY 404
           L ++ K +
Sbjct: 778 LPEKYKSF 785



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 8/249 (3%)

Query: 323 GASQIWNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            A   +NRM   G    +P V  Y  ++   C+        + +  +  +      +TF 
Sbjct: 67  AAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFT 126

Query: 380 TFIKGLCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV---TE 435
             +KGLC   R   AM + L +M +  C+P++ +   LL GL   NR +EA EL+    +
Sbjct: 127 PLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMAD 186

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
               G   ++V+Y T+++G  + G   +A+    +ML      D +T++ II A CK   
Sbjct: 187 DRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQA 246

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           ++ A+++L  +   G   P+ ++Y S+L G C+S   +EA  +L+KM ++G+ P+  T+N
Sbjct: 247 MDKAMEVLTTMVKNGVM-PNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYN 305

Query: 556 VLVRSLFSN 564
            L+  L  N
Sbjct: 306 SLMDYLCKN 314


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 269/531 (50%), Gaps = 33/531 (6%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F +++    +  + + A  M+ ++   G++P++  +N +++ L  + R      I S++ 
Sbjct: 170 FTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIF 229

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R    PN FTY  L+   C+N+ +D A+ +   M   GC P++V+Y+T            
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYST------------ 277

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                             LINGLC E ++EEA  +L EMV +GI+P V TY+  + SLCD
Sbjct: 278 ------------------LINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCD 319

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G    ++ +LG+M  RGC PNI +FT+L+ G    G+   A  L+++M+ +G +P  V 
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ LC  G  + A ++   M  +   P+  TY+ +I  F   G++  A  I+++M+
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G SPNV+ Y  ++   C+    + A  L+E M      P+  T+   I G    G+++
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  L   M ++   PN  TY  ++DG   + +V +A  L  ++ + G   +  TYN ++
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G  +   + EA    GKM+ +G   + IT+   I   C+ G+   A ++   +     +
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN-Y 618

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIY--LQKMLNEGICPNFATWNVLVRSL 561
            P++ +Y+SL++G+C  G  ++A +Y  L ++ + G  PN  T+  LV+ L
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGL 669



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/601 (26%), Positives = 283/601 (47%), Gaps = 43/601 (7%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           +LG+   +D  + +  +M   G+  S   F ++IN   + G  ++A  +   I  +   P
Sbjct: 176 QLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP 235

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               Y  ++      +   +   ++  M +DG +PN  TY+ L+  LC   R++ A  +L
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKE 178
            EM  KG  P   +YT  + S+C  G   EA EL  +         +  + ALI+GL ++
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            K E A  L  +M+  G+ P  +TY+ +I+ LC  G  ET+  I   M   G  P+  ++
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTY 415

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++K + L G   +A  ++++M++ G  PNV+ Y+TLI+G C  G+++ A+ +   M+ 
Sbjct: 416 NEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKG 475

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC------------- 345
           N   P+  TY+ LI GF++ G L  A+ ++  M+ +G SPN V YT              
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535

Query: 346 ----------------------MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
                                 M+    + N   +A +   KM  +   PN +T+ +FI 
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA--FELVTEIEKCGI 441
           GLC  GR   A K+  +M++    PN+ TY+ L+ GL +  R ++A  + L+  +   G 
Sbjct: 596 GLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGC 655

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+ TY T++ G+C  G   EA QL+  M  +G +     +  ++   CK  KV +A+ 
Sbjct: 656 EPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALN 715

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   +   G +   +  Y +L+  +C    ++EA    Q ML +    +   W VL+  L
Sbjct: 716 IFYSMDTLG-FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774

Query: 562 F 562
            
Sbjct: 775 L 775



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 173/603 (28%), Positives = 280/603 (46%), Gaps = 43/603 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +K  +   + ++  +       +   + S+I  + R    + A  MF R+ + G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y+ +++ L +E R      +   M + G+EP V+TY I L +LC       A 
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           +LL +M  +GC P+  ++T ++S + + G+ E A     + LA         YNALIN L
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 176 CKEHKIEEAF----WLLC-------------------------------EMVDRGIDPNV 200
           C E + E AF    W+L                                +M+  G  PNV
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ITY+T+I   C  GN+  ++ +L  M   G  P+  ++T L+ G+  GG+   A+ L+  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G  PN V Y+ +I G  +   +D+A+++ ++M E+   P+  TY+ +I GF+K  +
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A     +M+  G  PNV+ YT  +  LC+N     A  +  +M   N  PN  T+++
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627

Query: 381 FIKGLCGCGRVDWA--MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            I GLC  GR + A    LL ++  Y C PN+ TY  L+ GL    R  EA +LV  ++K
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+Q +   Y  +L G C+   V  A  +   M   G +L    +  +I A CK+  +  
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A Q + +      WN D + +T LL G+   G        L  M +     NF T+ +L 
Sbjct: 748 A-QCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLA 806

Query: 559 RSL 561
           R L
Sbjct: 807 REL 809



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 179/362 (49%), Gaps = 1/362 (0%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           +++T++  L     V+ +  +  +M   G  P++ +F +++      GR  EA  + + +
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI 228

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            R    PN   Y++LI G C N ++D A ++  +M ++ C PN  TYS LI+G    G L
Sbjct: 229 FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +   M+  G  P V  YT  +  LC      +A  L+ KM    C PN  TF   
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GL   G+ + A+ L  +M     +P   TYN L++ L    R + AF +   +   G 
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             +  TYN I+   C  G + +A  +  KML  G+  + IT+N +IY YCKQG +NNA++
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL+ ++G G   PD  +YT L+ G    G ++ A      M+  GI PN  T+  ++   
Sbjct: 469 LLEIMKGNG-LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGY 527

Query: 562 FS 563
           F+
Sbjct: 528 FN 529



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 216/515 (41%), Gaps = 85/515 (16%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C  + V+ LL +MK  G   +   F ++I+   R G  E A+ +++++   GL PT   Y
Sbjct: 322 CSSEAVE-LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 69  NHILDALLAENRFS--------MINP---------------------------IYSNMKR 93
           N +++ L  E RF         M++                            I+  M +
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            G  PNV TYN L+   CK   ++ A +LL  M   G  PDA +YT ++S   + G++E 
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 154 AREL---AMRFG-------------------------------------SGVSVYNALIN 173
           A  L    M  G                                          YN +I+
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K + I EA     +MV +G+ PNVITY++ I  LC  G    +  I  +M  R   P
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP 620

Query: 234 NIHSFTSLLKGYLLGGRTHEAS--DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           N+++++SL+ G    GR  +A   +L  R+   G  PNV  Y+TL+ GLC  G   EA  
Sbjct: 621 NLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQ 680

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   M++    P+   Y AL+ G  K   +  A  I+  M + G   ++  Y  ++  LC
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC 740

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           + N   +A  + + M  ++   + V +   + GL   G  D  +KLL  M+   C  N  
Sbjct: 741 KENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQ 800

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
           TY       + + R   A +   +I +   QL IV
Sbjct: 801 TY-------VMLARELSALDCAIKIPQISQQLGIV 828



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 2/140 (1%)

Query: 425 RVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            VK   + ++EI  K      + ++ T+L  + +  MV  A  +  KML  G +   +TF
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTF 205

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N +I   CK+G+V  A  ++  I     + P+  +YTSL+ G C +  +  AF    +M+
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAY-PNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 544 NEGICPNFATWNVLVRSLFS 563
            +G  PN  T++ L+  L S
Sbjct: 265 KDGCDPNSVTYSTLINGLCS 284


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 270/525 (51%), Gaps = 6/525 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R+G+    +  ++R+   G++P + IYN +++AL  +   +    I   +    M P+ F
Sbjct: 362 RLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTF 421

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
           TY  ++   C+ + +D A ++  +M  +GC P+ V+Y+T+++ +C  G+V EA    RE+
Sbjct: 422 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481

Query: 158 AMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            +             I  LC     E+A+ L  +M ++G +PNV TY+ +IS LC  G +
Sbjct: 482 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 541

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++G+  +M   G  PN  ++ +L+   +   R   A  + N M R G   N+V Y+ +
Sbjct: 542 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEM 601

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G   +A+ V   M +     N+ TY+ +I G+  +GN   A +I + M   GC
Sbjct: 602 IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGC 661

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+  +YT ++   C+ +    A  L  +M  +   PN VT+   I G C   ++D A  
Sbjct: 662 KPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATS 721

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL+ MK+  C PN+ TYN L+ GL + N    A EL   + + GI  N+VTY  ++ G+C
Sbjct: 722 LLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLC 781

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G    A ++  KM+ +G   + +T++ +I A  ++GKV  A  L   +   G   PD 
Sbjct: 782 KNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG-LIPDE 840

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I+Y  ++     SG ++ AF +L +M+  G  P   T+ VL++ L
Sbjct: 841 ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/561 (27%), Positives = 269/561 (47%), Gaps = 17/561 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K ++D    +  QM  EG   +   + ++IN     G   +A  +   +   G+ PT  
Sbjct: 432 RKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAH 491

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
                + AL     +     ++ +MK  G EPNV+TY  L+  LC +  +  A  L   M
Sbjct: 492 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKI 181
              G  P+ V+Y  +++ + +  +++ A     L  R G  + +  YN +I G C     
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A  ++  M+ RG   N++TY+TII   CD GN  ++L IL  M   GC P+  S+T L
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G+    +   A  L+N M+ +G  PN V Y+ LI G C +  +D A S+   M+ + C
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV TY+ LI G  K  N  GA ++   MI  G  PNVV YT M+  LC+N     A  
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +  KM  + C PN +T+++ I+ L   G+V+ A  L  +++++  +P+  TY ++++  +
Sbjct: 792 MFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYI 851

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
              +V+ AF  +  + K G Q  + TY  ++ G            L  + L+   +L A+
Sbjct: 852 MSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG------------LKNEYLLADQRLAAL 899

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
              +   ++  Q    +A+ ++       +    +    +L+  +  +G   EA   L  
Sbjct: 900 PDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGS 959

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           M+++G+CP+   +N L+ SL 
Sbjct: 960 MISQGLCPDQEAYNSLLCSLL 980



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 228/465 (49%), Gaps = 41/465 (8%)

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++  + +LG      +   R    GV     +YNA+IN LCK+  + +A  ++ ++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  + P+  TY+++I   C   +++++L +  QM   GC PN  ++++L+ G    GR 
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           +EA DL   MI  G LP     +  I  LC  G  ++A  +   M+   C PNV TY+AL
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA---- 367
           I G   +G L  A  +++RM  +G  PN V Y  ++ +L +N     A  ++  M     
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591

Query: 368 FENC-------------------------------PPNTVTFNTFIKGLCGCGRVDWAMK 396
           F N                                  N VT+NT IKG C  G    A++
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +LD M+   C P+  +Y EL+ G  ++++++ AF L  E+   G+  N VTY  ++ G C
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYC 711

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +   +  A  LL  M   G + +  T+N++I+   KQ   + A +L   +   G + P++
Sbjct: 712 KDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF-PNV 770

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++YT+++ G+C +G    A     KM+ +G  PN  T++ L+R+L
Sbjct: 771 VTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 131/530 (24%), Positives = 223/530 (42%), Gaps = 54/530 (10%)

Query: 36   VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            +I  Y  +G  ++A+ +   + + G    +  YN I+         +    I   M+  G
Sbjct: 601  MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 660

Query: 96   MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             +P+ ++Y  L+   CK ++++ A+ L  EM + G  P+ V+YT ++   CK  +++ A 
Sbjct: 661  CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 720

Query: 156  EL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
             L     R G    V  YN LI+GL K++    A  L   M++ GI PNV+TY+ +I  L
Sbjct: 721  SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGL 780

Query: 211  CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
            C  G+   +L +  +M  +GC PN+ +++SL++     G+  EA +L+  + R G +P+ 
Sbjct: 781  CKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840

Query: 271  VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
            + Y  +I     +G ++ A +   +M +  C P + TY  LI G  K   LL   ++   
Sbjct: 841  ITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL-KNEYLLADQRL--- 896

Query: 331  MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF-NTFIKGLCGCG 389
                   P+VV   C       +     A S++     E  P  +V   N  +  L   G
Sbjct: 897  ----AALPDVVP-NCSFGYQTTD---QDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 948

Query: 390  RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            R   A +LL  M      P+   YN LL  LLRV  V  A  +   +   G ++++  Y 
Sbjct: 949  RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 1008

Query: 450  TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
             ++  +C+     EA      ML+                                    
Sbjct: 1009 ELICALCQLHRRKEARITFENMLMR----------------------------------- 1033

Query: 510  GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              WNPD +    L+ G+   G       +L  M      P+F  + +L R
Sbjct: 1034 -TWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 1082



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 190/435 (43%), Gaps = 29/435 (6%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            ++  M   G S +   + ++I  Y   G    AL++   +R+ G KP    Y  ++    
Sbjct: 617  VMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFC 676

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              ++      +++ M  DG+ PN  TY  L+   CK+ ++D A  LL  M   GC P+  
Sbjct: 677  KISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQ 736

Query: 137  SYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            +Y  ++  + K      A EL            V  Y A+I+GLCK      A  +  +M
Sbjct: 737  TYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +++G  PN++TYS++I +L   G VE +  +  ++   G  P+  ++  +++ Y++ G+ 
Sbjct: 797  IEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKV 856

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLIHGL--------------------CSNG---SMDE 288
              A +   RMI+ G  P +  Y  LI GL                    CS G   +  +
Sbjct: 857  EHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQD 916

Query: 289  AVSV-SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            AVSV S ++ E     +V   +AL+   + AG    A+++   MIS G  P+  AY  ++
Sbjct: 917  AVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLL 976

Query: 348  KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              L +      A  + + M+ + C  +   +   I  LC   R   A    + M      
Sbjct: 977  CSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWN 1036

Query: 408  PNITTYNELLDGLLR 422
            P+      L+DGLLR
Sbjct: 1037 PDDVVQAVLIDGLLR 1051



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 153/313 (48%), Gaps = 1/313 (0%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           + G    + AYS L+  L   G     +   ++M      PN+  Y+A+I+   K GN+ 
Sbjct: 343 QSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVA 402

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  I  ++  +  SP+   YT M+   C+ +    A  +  +MA E C PNTVT++T I
Sbjct: 403 DAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLI 462

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  GRV+ A  L+ +M  +  LP   T    +  L  +   ++A+ L  +++  G +
Sbjct: 463 NGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCE 522

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N+ TY  ++ G+C +G++  A  L  +M  +G   + +T+N +I    +  ++  A  +
Sbjct: 523 PNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVV 582

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           L+ +   G +  +I++Y  ++ G C  G  ++A + +  ML  G   N  T+N +++   
Sbjct: 583 LNLMGRNGLFT-NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 641

Query: 563 SNLGHLGPVYILD 575
            +      + ILD
Sbjct: 642 DSGNTTSALRILD 654



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 173/429 (40%), Gaps = 64/429 (14%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L  +M  +G+  +E  + ++I+ Y +    + A  +   ++  G +P V+ YN ++  L 
Sbjct: 687  LFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT 746

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +N FS    +   M  +G+ PNV TY  ++  LCKN     A ++  +M  +GC P+ +
Sbjct: 747  KQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLL 806

Query: 137  SYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            +Y++++ ++ + G+VEEA  L     R G       Y  +I       K+E AF  L  M
Sbjct: 807  TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 866

Query: 192  VDRGIDPNVITYSTIISSL--------------------CDVGNVETSLGILGQMFVR-- 229
            +  G  P + TY  +I  L                    C  G   T    +  M  +  
Sbjct: 867  IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 926

Query: 230  GCNP--NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
              +P  ++    +L+      GR  EA++L   MI +G  P+  AY++L+  L    ++D
Sbjct: 927  ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 986

Query: 288  EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
             A+ V                                   +  M + GC  ++  Y  ++
Sbjct: 987  LAMGV-----------------------------------FKHMSTQGCEVHLNGYKELI 1011

Query: 348  KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              LCQ +   +A    E M      P+ V     I GL   G  D  M+ L  M+    +
Sbjct: 1012 CALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYM 1071

Query: 408  PNITTYNEL 416
            P+   Y  L
Sbjct: 1072 PSFHIYTIL 1080



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 153/346 (44%), Gaps = 29/346 (8%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  L ++    G + L + M  EG+  +   + ++I+   + G    AL+MF ++ E G
Sbjct: 741  LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P +  Y+ ++ AL  E +      +++ ++R G+ P+  TY  +++A   + +V+ A+
Sbjct: 801  CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 860

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSI--------------------CKLG---------QV 151
              L  M   GC P   +Y  ++  +                    C  G          V
Sbjct: 861  NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSV 920

Query: 152  EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
              A+   +  G  V V NAL++ L    +  EA  LL  M+ +G+ P+   Y++++ SL 
Sbjct: 921  MSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLL 980

Query: 212  DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             V NV+ ++G+   M  +GC  +++ +  L+       R  EA   +  M+   + P+ V
Sbjct: 981  RVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDV 1040

Query: 272  AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              + LI GL  +G  D  +   + ME     P+   Y+ L    +K
Sbjct: 1041 VQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASK 1086


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 167/557 (29%), Positives = 276/557 (49%), Gaps = 9/557 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF ++ ++   +G+ E+A + F ++R+F + P  +  N +L  L    R  +    + +
Sbjct: 186 GVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKD 245

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G++ +VFTYNI++  LCK   ++ A  L  +M   G  PD V+Y +++    KLG 
Sbjct: 246 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 305

Query: 151 VEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++E   +  +         V  YNALIN  CK  ++ +AF  L EM   G+ PNV+TYST
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            I + C  G ++ ++     M      PN  ++TSL+      G   EA  L   +++ G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              NVV Y+ L+ GLC  G M EA  V   M      PN  TY+AL+ GF KA  +  A 
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 485

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            I   M      P+++ Y  ++  LC  +   +A  LI ++       N V + T +   
Sbjct: 486 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 545

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+   A+ LL++M     +    TY  L+DGL +   V+EA      + + G+Q N+
Sbjct: 546 FKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNV 605

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             Y  ++ G+C+      A +L  +ML +G   D I +  +I    K G +  A+ L DR
Sbjct: 606 AVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDR 665

Query: 506 -IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            I  G E   D+ +YT+L+WG+ +SG +Q+A   L +M+ +G+ P+   +  L++  ++ 
Sbjct: 666 MIEIGMEL--DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA- 722

Query: 565 LGHLGPVYILDDIMANK 581
           LG +     L + MA +
Sbjct: 723 LGKVDEALELQNEMAKR 739



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 255/520 (49%), Gaps = 15/520 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +L +    D  +   + M   G+  S   +  +I+   + G  E A  +F +++E G
Sbjct: 226 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 285

Query: 61  LKPTVKIYNHILDALLAENRFSMINP---IYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             P +  YN ++D      +  +++    I+  MK    +P+V TYN L+   CK  R+ 
Sbjct: 286 FTPDIVTYNSLIDG---HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMP 342

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNA 170
            A++ L EM   G  P+ V+Y+T + + CK G ++EA       R +A+        Y +
Sbjct: 343 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALT--PNEFTYTS 400

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI+  CK   + EA  L+ E++  GI  NV+TY+ ++  LC+ G ++ +  +   M   G
Sbjct: 401 LIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAG 460

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             PN  ++T+L+ G++       A D+   M  +   P+++ Y T++ GLC+   ++EA 
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 520

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  +++E+    N   Y+ L+D + K+G    A  +   M+  G     V Y  ++  L
Sbjct: 521 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGL 580

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C++ +  +A     +M+     PN   +   + GLC     + A KL D+M     +P+ 
Sbjct: 581 CKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDK 640

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             Y  L+DG ++   ++EA  L   + + G++L++  Y  ++ G+  +G V +A  LL +
Sbjct: 641 IAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDE 700

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           M+ +G   D + +  +I  Y   GKV+ A++L + +   G
Sbjct: 701 MIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 228/466 (48%), Gaps = 6/466 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P    ++ L  AL +   ++ A +  ++M      P   S   ++  + K+G+ + +R+ 
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242

Query: 158 AMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               G+      V  YN +I+ LCKE  +E A  L  +M + G  P+++TY+++I     
Sbjct: 243 FKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGK 302

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G ++  + I  QM    C+P++ ++ +L+  +    R  +A +  + M   G  PNVV 
Sbjct: 303 LGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVT 362

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YST I   C  G + EA+     M   +  PN  TY++LID   KAGNL  A ++   ++
Sbjct: 363 YSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEIL 422

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   NVV YT ++  LC+     +A  +   M      PN  T+   + G      ++
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           +A  +L +MK+    P++  Y  +L GL   +R++EA  L+ EI++ GI  N V Y T++
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
               ++G   EA  LL +ML  G     +T+  +I   CK G V  A+    R+   G  
Sbjct: 543 DAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG-L 601

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            P++  YT+L+ G+C +   + A     +ML++G+ P+   +  L+
Sbjct: 602 QPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 647



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 216/431 (50%), Gaps = 7/431 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           + +QMK          + ++IN + +     +A +  + ++  GLKP V  Y+  +DA  
Sbjct: 312 IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFC 371

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E         + +M+R  + PN FTY  L+ A CK   +  A KL+ E+   G   + V
Sbjct: 372 KEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 431

Query: 137 SYTTIVSSICKLGQVEEAREL--AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           +YT ++  +C+ G+++EA E+  AM   +GV+     Y AL++G  K  ++E A  +L E
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAM-LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 490

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++ I P+++ Y TI+  LC+   +E +  ++G++   G N N   +T+L+  Y   G+
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA  L   M+  G +   V Y  LI GLC +G + EA+    +M E    PNV  Y+A
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTA 610

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+DG  K      A ++++ M+  G  P+ +AYT ++    ++    +A +L ++M    
Sbjct: 611 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              +   +   I GL   G+V  A  LLD+M     LP+   Y  L+     + +V EA 
Sbjct: 671 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730

Query: 431 ELVTEIEKCGI 441
           EL  E+ K G+
Sbjct: 731 ELQNEMAKRGM 741



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 173/382 (45%), Gaps = 34/382 (8%)

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C P    F +L    +  G   EAS+ + +M +    P   + + L+H L   G  D + 
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
                M       +V TY+ +ID   K G+L  A  ++ +M   G +P++V Y  ++   
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +  +  +   + E+M   +C P+ +T+N  I   C   R+  A + L +MK     PN+
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY+  +D   +   ++EA +   ++ +  +  N  TY +++   C+AG + EA +L+ +
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-------------------- 510
           +L  G KL+ +T+  ++   C++G++  A ++   +   G                    
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480

Query: 511 -EW-------------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
            E+              PD++ Y ++LWG+CN   ++EA + + ++   GI  N   +  
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 540

Query: 557 LVRSLFSNLGHLGPVYILDDIM 578
           L+ + F +      + +L++++
Sbjct: 541 LMDAYFKSGQATEALTLLEEML 562



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 30/264 (11%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  + L+ ++K  G++ +  ++ +++++Y + G A +AL +   + + GL  T   Y  
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L            +  M   G++PNV  Y  L+  LCKNN  + A KL  EM +KG
Sbjct: 576 LIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
             PD ++YT                              ALI+G  K   ++EA  L   
Sbjct: 636 MMPDKIAYT------------------------------ALIDGNMKHGNLQEALNLRDR 665

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M++ G++ ++  Y+ +I  L   G V+ +  +L +M  +G  P+   +  L+K Y   G+
Sbjct: 666 MIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGK 725

Query: 251 THEASDLWNRMIREGFLPNVVAYS 274
             EA +L N M + G +  +  ++
Sbjct: 726 VDEALELQNEMAKRGMITGLSDHA 749



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 129/298 (43%), Gaps = 18/298 (6%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R GF     AY  L+H L       +A +V   ++E  C   V     + D       LL
Sbjct: 125 RIGFQHTSEAYCILVHILFCARFYSDANAV---LKELICLRRVLPSWDVFD-------LL 174

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A++       N C P    +  +   L +  M  +A     KM      P   + N  +
Sbjct: 175 WATR-------NVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALL 227

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
             L   GR D + K    M       ++ TYN ++D L +   ++ A  L T++++ G  
Sbjct: 228 HRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFT 287

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            +IVTYN+++ G  + G++ E   +  +M       D IT+N +I  +CK  ++  A + 
Sbjct: 288 PDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEF 347

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           L  ++  G   P++++Y++ +   C  G +QEA  +   M    + PN  T+  L+ +
Sbjct: 348 LHEMKANG-LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 274/529 (51%), Gaps = 30/529 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P+V  YN +L AL ++   +     + +M  DG+ PNV+TYNIL++ALC       A
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALING 174
             +L +M   GC P+ V+Y T+V++  + G+V+ A  L  M    G+      +N+++NG
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +CK  K+E+A  +  EM+  G+ P+ ++Y+T++   C  G    +L +  +M  +G  P+
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +FTSL+      G    A  L  +M   G   N V ++ LI G C  G +D+A+    
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M +    P+V  Y+ALI+G+   G +  A ++ + M + G  P+VV Y+ ++   C+N 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             H A  L ++M  +   P+ +T+++ I+ LC   R+  A  L   M +    P+  TY 
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   V+ A  L  ++ K G+  ++VTY+ +++G+ ++   +EA QLL K+  E
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529

Query: 475 -----GTKLDAI----------TFNIIIYAYCKQGKVNNAIQ----LLDRIRGGGEWNPD 515
                 TK DA+          +   ++  +C +G +N A +    +LDR      WN D
Sbjct: 530 EPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR-----NWNLD 584

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              Y+ L+ G C +G + +A  + ++ML  G  PN  +   L+R LF N
Sbjct: 585 GSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFEN 633



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/518 (30%), Positives = 269/518 (51%), Gaps = 23/518 (4%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A + F  +   G+ P V  YN ++ AL           I  +M+  G  PNV TYN L+
Sbjct: 133 SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLV 192

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG-- 162
            A  +   VDGA +L+  M + G  P+ V++ ++V+ +CK G++E+AR++    MR G  
Sbjct: 193 AAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLA 252

Query: 163 -SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             GVS YN L+ G CK     EA  +  EM  +GI P+V+T++++I  +C  GN+E ++ 
Sbjct: 253 PDGVS-YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVT 311

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++ QM  RG   N  +FT+L+ G+   G   +A      M +    P+VV Y+ LI+G C
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G MDEA  + ++ME     P+V TYS +I  + K  +   A ++  +M+  G  P+ +
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 431

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ +++VLC+      AH L + M      P+  T+ + I G C  G V+ A+ L D+M
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKM 491

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEA----FELVTE-----------IEKCGIQLNIV 446
            +   LP++ TY+ L++GL +  R  EA    F+L  E           +  C  +  + 
Sbjct: 492 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELK 551

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +   +L G C  G++ EA ++   ML     LD   ++++I+ +C+ G V  A+    ++
Sbjct: 552 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 611

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
              G + P+  S  SL+ G+  +G + EA   +Q++LN
Sbjct: 612 LQRG-FAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 648



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 250/516 (48%), Gaps = 24/516 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M+  G   +   + +++ ++ R G  + A ++   + + GLKP +  +N +++ + 
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      ++  M R+G+ P+  +YN L+   CK      A  +  EM  KG  PD V
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 137 SYTTIVSSICKLGQVE-------EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           ++T+++  +CK G +E       + RE  ++       + ALI+G CK+  +++A   + 
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE--VTFTALIDGFCKKGFLDDALLAVR 349

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M    I P+V+ Y+ +I+  C VG ++ +  +L +M  +G  P++ ++++++  Y    
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            TH A +L  +M+ +G LP+ + YS+LI  LC    + +A  +   M +    P+  TY+
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYT 469

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +LIDG  K GN+  A  + ++M+  G  P+VV Y+ ++  L ++    +A  L+ K+  E
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE 529

Query: 370 NCPPNTVTFN---------------TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              P    ++                 +KG C  G ++ A K+   M       + + Y+
Sbjct: 530 EPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYS 589

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G  R   V +A     ++ + G   N  +  +++ G+   GMVVEA Q++ ++L  
Sbjct: 590 VLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNC 649

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            +  DA     +I     +G V+  + +L  +   G
Sbjct: 650 CSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDG 685



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 231/489 (47%), Gaps = 38/489 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+DG + L+  M   G+  +   F S++N   + G  E A K+F  +   GL P    YN
Sbjct: 200 EVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYN 259

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++              +++ M + G+ P+V T+  L+  +CK   ++ A  L+ +M  +
Sbjct: 260 TLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRER 319

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAM------RFGSGVSVYNALINGLCKEHKIEE 183
           G   + V++T ++   CK G +++A  LA+      R    V  YNALING C   +++E
Sbjct: 320 GLQMNEVTFTALIDGFCKKGFLDDAL-LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDE 378

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  LL EM  +G+ P+V+TYSTIIS+ C   +  ++  +  QM  +G  P+  +++SL++
Sbjct: 379 ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIR 438

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                 R  +A  L+  MI+ G  P+   Y++LI G C  G+++ A+S+  +M +    P
Sbjct: 439 VLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP 498

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT---------------CMVK 348
           +V TYS LI+G +K+   + A Q+  ++      P    Y                 ++K
Sbjct: 499 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLK 558

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C   + ++A  + + M   N   +   ++  I G C  G V  A+    QM Q    P
Sbjct: 559 GFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAP 618

Query: 409 NITTYNELLDGLLRVNRVKEAFELV-----------TEIEKCGIQLNIVTYNT-----IL 452
           N T+   L+ GL     V EA +++            E  K  I LN+   N      +L
Sbjct: 619 NSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVL 678

Query: 453 HGVCRAGMV 461
           HG+ + G++
Sbjct: 679 HGMAKDGLL 687



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 171/378 (45%), Gaps = 55/378 (14%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++QM+  G+  +E  F ++I+ + + G  + AL     +R+  +KP+V  YN +++   
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   M+  G++P+V TY+ ++ A CKN     A++L  +M  KG  PDA+
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 431

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++  +C+  ++ +A  L    ++ G       Y +LI+G CKE  +E A  L  +M
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKM 491

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP---------------NIH 236
           V  G+ P+V+TYS +I+ L        +  +L +++     P                + 
Sbjct: 492 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELK 551

Query: 237 SFTSLLKGYLLGGRTHEASDL--------WN---------------------------RM 261
           S  +LLKG+ + G  +EA  +        WN                           +M
Sbjct: 552 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 611

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           ++ GF PN  +  +LI GL  NG + EA  V  Q+       +     ALID     GN+
Sbjct: 612 LQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNV 671

Query: 322 LGASQIWNRMISNGCSPN 339
                + + M  +G  P+
Sbjct: 672 DAVLDVLHGMAKDGLLPS 689



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 20/315 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D  + LL +M+ +G+      + ++I++Y +      A ++  ++ E G+ P    Y+
Sbjct: 375 RMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYS 434

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E R S  + ++ NM + G++P+ FTY  L+   CK   V+ A  L  +M   
Sbjct: 435 SLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKA 494

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF--------------------GSGVSVYN 169
           G  PD V+Y+ +++ + K  +  EA++L  +                      + +    
Sbjct: 495 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVL 554

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           AL+ G C +  + EA  +   M+DR  + +   YS +I   C  GNV  +L    QM  R
Sbjct: 555 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQR 614

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN  S  SL++G    G   EA  +  +++    L +  A   LI    + G++D  
Sbjct: 615 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAV 674

Query: 290 VSVSYQMEENSCPPN 304
           + V + M ++   P+
Sbjct: 675 LDVLHGMAKDGLLPS 689


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 255/478 (53%), Gaps = 6/478 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+  F R+      P +  +N ILD+      +S    +   ++  G++P++ T NIL
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           +   C   ++   + +L ++  +G  PD V+  T++  +C  GQV++A     + LA  F
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y  LING+CK      A  LL ++  R   PNV+ YSTII +LC    V  + G
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M V+G + ++ ++++L+ G+ + G+  EA  L N M+ +   PNV  Y+ L+  LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA SV   M +    P+V TYS L+DG+     +  A  ++N M   G +P+V 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++   C+N M  +A +L ++M  +N  P  VT+++ I GLC  GR+ +   L+D+M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                  N+ TY+ L+DGL +   +  A  L  +++  GI+ N  T+  +L G+C+ G +
Sbjct: 401 HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 460

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +A ++   +L +G  L+  T+N++I  +CKQG +  A+ +L ++   G   PD +++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG-CIPDAVTF 517



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 224/441 (50%), Gaps = 5/441 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +++++G+         +IN +  +G       +  +I + G  P     N ++  L 
Sbjct: 81  LSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC 140

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +       +  +   G + N  +Y  L+  +CK      A KLL ++  +   P+ V
Sbjct: 141 LKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVV 200

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+TI+ ++CK   V EA     E+ ++   + V  Y+ LI G C E K++EA  LL EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V + I+PNV TY+ ++ +LC  G V+ +  +L  M      P++ ++++L+ GY L    
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++N M   G  P+V  Y+ LI+G C N  +DEA+++  +M + +  P + TYS+L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +     + + M   G   NV+ Y+ ++  LC+N    +A +L  KM  +  
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGI 440

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PNT TF   + GLC  GR+  A ++   +       N+ TYN ++DG  +   ++EA  
Sbjct: 441 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALT 500

Query: 432 LVTEIEKCGIQLNIVTYNTIL 452
           +++++E  G   + VT+  I+
Sbjct: 501 MLSKMEDNGCIPDAVTFEIII 521



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 206/407 (50%), Gaps = 1/407 (0%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R L MR    +  +N +++   K      A  L   +  +GI P++IT + +I+  C +G
Sbjct: 49  RMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +     +L ++  RG  P+  +  +L+KG  L G+  +A    ++++ +GF  N V+Y 
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYG 168

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI+G+C  G    A+ +  +++     PNV  YS +ID   K   +  A  +++ M   
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G S +VV Y+ ++   C      +A  L+ +M  +   PN  T+N  +  LC  G+V  A
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             +L  M +    P++ TY+ L+DG   V  VK+A  +   +   G+  ++ TY  +++G
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+  MV EA  L  +M  +      +T++ +I   CK G++     L+D +   G+   
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQ-PA 407

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++I+Y+SL+ G+C +G +  A     KM ++GI PN  T+ +L+  L
Sbjct: 408 NVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGL 454



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 200/390 (51%), Gaps = 5/390 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++    +   ++  +G   ++  + ++IN   ++G    A+K+  +I    
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRL 194

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V +Y+ I+DAL      S    ++S M   G+  +V TY+ L+   C   ++  A 
Sbjct: 195 TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM  K   P+  +Y  +V ++CK G+V+EA+  LA+   + V      Y+ L++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
              +++++A  +   M   G+ P+V TY+ +I+  C    V+ +L +  +M  +   P I
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    GR     DL + M   G   NV+ YS+LI GLC NG +D A+++  +
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNK 434

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++    PN  T++ L+DG  K G L  A +++  +++ G   NV  Y  M+   C+  +
Sbjct: 435 MKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGL 494

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
             +A +++ KM    C P+ VTF   I  L
Sbjct: 495 LEEALTMLSKMEDNGCIPDAVTFEIIIIAL 524



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 147/278 (52%), Gaps = 1/278 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++D+AVS   +M      P +  ++ ++D FAK  +   A  + +R+   G  P+++   
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C         S++ K+     PP+TVT NT IKGLC  G+V  A+   D++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               N  +Y  L++G+ ++   + A +L+ +I+    + N+V Y+TI+  +C+  +V EA
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           + L  +M ++G   D +T++ +IY +C +GK+  AI LL+ +      NP++ +Y  L+ 
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV-LKTINPNVYTYNILVD 277

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +C  G ++EA   L  ML   + P+  T++ L+   F
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 140/263 (53%), Gaps = 7/263 (2%)

Query: 80   RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
             +S    +   ++  G++P++FT NIL+   C   ++   + +L ++  +G  PD +++T
Sbjct: 941  HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFT 1000

Query: 140  TIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
            T+++ +C  GQV +A     + LA  F      Y  LING+CK      A  LL ++  R
Sbjct: 1001 TLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGR 1060

Query: 195  GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
               P+V+ Y+TII +LC    V  + G+  +M V+G + ++ ++ +L+ G+ + G+  EA
Sbjct: 1061 LTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEA 1120

Query: 255  SDLWNRMIREGFLPNVVAYSTLIHGLCSNGS--MDEAVSVSYQMEENSCPPNVTTYSALI 312
              L N+M+ +   PNV  Y+ L+  LC  G   +DE++S+  +ME+N C  N  T+  +I
Sbjct: 1121 IGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIII 1180

Query: 313  DGFAKAGNLLGASQIWNRMISNG 335
                +        ++ + MI+ G
Sbjct: 1181 SALFEKDENDKVEKLLHEMIARG 1203



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 175/380 (46%), Gaps = 2/380 (0%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           ++S   S    + NV+ ++    +M      P I  F  +L  +        A  L +R+
Sbjct: 26  SHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G  P+++  + LI+  C  G +    SV  ++ +   PP+  T + LI G    G +
Sbjct: 86  ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQV 145

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A    +++++ G   N V+Y  ++  +C+      A  L++K+      PN V ++T 
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTI 205

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I  LC    V  A  L  +M       ++ TY+ L+ G     ++KEA  L+ E+    I
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N+ TYN ++  +C+ G V EA  +L  ML    K D IT++ ++  Y    +V  A  
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + + +   G   PD+ +YT L+ G C +  + EA    ++M  + + P   T++ L+  L
Sbjct: 326 VFNAMSLMG-VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 562 FSNLGHLGPVYILDDIMANK 581
             + G +  V+ L D M ++
Sbjct: 385 CKS-GRIPYVWDLIDEMHDR 403



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 126/245 (51%), Gaps = 2/245 (0%)

Query: 194  RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
            +GI P++ T + +I+  C +G +  +  IL ++  RG +P+  +FT+L+ G  L G+ ++
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 254  ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
            A    ++++ +GF  N V+Y TLI+G+C  G    A+ +  +++     P+V  Y+ +ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 314  GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
               K   +  A  ++  M   G S +VV Y  ++   C      +A  L+ KM  +   P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 374  NTVTFNTFIKGLCGCGR--VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            N  T+N  +  LC  G+  +D ++ +L +M+   C  N  T+  ++  L   +   +  +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 432  LVTEI 436
            L+ E+
Sbjct: 1195 LLHEM 1199



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 122/224 (54%), Gaps = 2/224 (0%)

Query: 289  AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
            AVS+S+++E     P++ T + LI+ F   G +     I  +++  G  P+ + +T ++ 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 349  VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             LC     ++A    +K+  +    N V++ T I G+C  G    A+KLL ++      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 409  NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            ++  YN ++D L +   V +A+ L  E+   GI  ++VTYNT+++G C  G + EA  LL
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 469  GKMLIEGTKLDAITFNIIIYAYCKQGK--VNNAIQLLDRIRGGG 510
             KM+++    +  T+NI++ A CK+GK  ++ ++ +L ++   G
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG 1168



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 2/235 (0%)

Query: 169  NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
            N LIN  C   +I   F +L +++ RG  P+ IT++T+I+ LC  G V  +L    ++  
Sbjct: 965  NILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLA 1024

Query: 229  RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            +G   N  S+ +L+ G    G T  A  L  ++      P+VV Y+T+I  LC +  + +
Sbjct: 1025 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSK 1084

Query: 289  AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
            A  + ++M       +V TY+ LI GF   G L  A  + N+M+    +PNV  Y  +V 
Sbjct: 1085 AYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVD 1144

Query: 349  VLCQ--NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             LC+   ++  ++ S++ KM    C  N VTF   I  L      D   KLL +M
Sbjct: 1145 ALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEM 1199



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 136/260 (52%), Gaps = 2/260 (0%)

Query: 218  TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            T++ +  ++ ++G  P++ +   L+  +   G+      +  ++++ G+ P+ + ++TLI
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 278  HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            +GLC  G +++A+    ++       N  +Y  LI+G  K G+   A ++  ++      
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 338  PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            P+VV Y  ++  LC++ +  +A+ L  +M  +    + VT+NT I G C  G++  A+ L
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 398  LDQMKQYECLPNITTYNELLDGLLRVNR--VKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L++M      PN+ TYN L+D L +  +  + E+  +++++E  G + N VT+  I+  +
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183

Query: 456  CRAGMVVEAFQLLGKMLIEG 475
                   +  +LL +M+  G
Sbjct: 1184 FEKDENDKVEKLLHEMIARG 1203



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 3/212 (1%)

Query: 352  QNNMFH--QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
             N M H   A SL  ++  +   P+  T N  I   C  G++ +   +L ++ +    P+
Sbjct: 936  HNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPD 995

Query: 410  ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              T+  L++GL    +V +A     ++   G QLN V+Y T+++GVC+ G    A +LL 
Sbjct: 996  TITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLR 1055

Query: 470  KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            K+    TK D + +N II A CK   V+ A  L   +   G  + D+++Y +L++G C  
Sbjct: 1056 KIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKG-ISADVVTYNTLIYGFCIV 1114

Query: 530  GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G ++EA   L KM+ + I PN  T+N+LV +L
Sbjct: 1115 GKLKEAIGLLNKMVLKTINPNVRTYNILVDAL 1146



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 2/259 (0%)

Query: 254  ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
            A  L +R+  +G  P++   + LI+  C  G +    S+  ++ +    P+  T++ LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 314  GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
            G    G +  A    +++++ G   N V+Y  ++  +C+      A  L+ K+      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 374  NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
            + V +NT I  LC    V  A  L  +M       ++ TYN L+ G   V ++KEA  L+
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 434  TEIEKCGIQLNIVTYNTILHGVCRAG--MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
             ++    I  N+ TYN ++  +C+ G  ++ E+  +L KM   G K +A+TF III A  
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 492  KQGKVNNAIQLLDRIRGGG 510
            ++ + +   +LL  +   G
Sbjct: 1185 EKDENDKVEKLLHEMIARG 1203



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 7/258 (2%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L  +++++G+         +IN +  +G       +  +I + G  P    +  +++ L 
Sbjct: 948  LSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLC 1007

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             + + +     +  +   G + N  +Y  L+  +CK      A KLL ++  +   PD V
Sbjct: 1008 LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVV 1067

Query: 137  SYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
             Y TI+ ++CK   V +A  L          + V  YN LI G C   K++EA  LL +M
Sbjct: 1068 MYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKM 1127

Query: 192  VDRGIDPNVITYSTIISSLCDVGN--VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            V + I+PNV TY+ ++ +LC  G   ++ SL +L +M   GC  N  +F  ++       
Sbjct: 1128 VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKD 1187

Query: 250  RTHEASDLWNRMIREGFL 267
               +   L + MI  G L
Sbjct: 1188 ENDKVEKLLHEMIARGLL 1205



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 28/230 (12%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  L  K +++   +   ++  +G   ++  + ++IN   ++G    A+K+  +I    
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             KP V +YN I+DAL      S    ++  M   G+  +V TYN L+   C   ++  A 
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
             LL +M  K   P+  +Y  +V ++CK     E ++L                       
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCK-----EGKDL----------------------- 1153

Query: 181  IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
            ++E+  +L +M D G   N +T+  IIS+L +    +    +L +M  RG
Sbjct: 1154 LDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 77/147 (52%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I  V  L+ +M   G   +   + S+I+   + G  ++A+ +F ++++ G
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    +  +LD L    R      ++ ++   G   NV+TYN+++   CK   ++ A 
Sbjct: 440 IRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEAL 499

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICK 147
            +L +M + GC PDAV++  I+ ++ K
Sbjct: 500 TMLSKMEDNGCIPDAVTFEIIIIALFK 526


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 166/572 (29%), Positives = 274/572 (47%), Gaps = 42/572 (7%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
            ++F  +   GL P++K  N +L +L+  N   M   ++  M   G+ P+V+ ++ ++ A
Sbjct: 147 FELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNA 206

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSG 164
            C   RVD A +L  +M   G AP+ V+Y  I+  +CK G+++EA +        R    
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           +  Y  LINGL K  + +EA  +L EM DRG  PN + Y+T+I   C +GN+ T+L I  
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRD 326

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG------------------- 265
            M   G +PN  +  SL++GY    +   A  L   M+  G                   
Sbjct: 327 DMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386

Query: 266 ----------------FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
                           F PN    + L+ GLC NG   EA+ + Y++ E     N  T +
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ALI G  +AG+   A+++   M+  G   + ++Y  ++   C+     +   L E+M   
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+  T+N  + GLC  G+++ A  L  + K+    P+  TY  ++DG  + NRV+E 
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            +L  E+    I+ N V Y T++   C  G + EAF+L   M   G    + T++ +I+ 
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
               G V++A QLLD +R  G  +P+++ YT+L+ G C  G M +    LQ+M    + P
Sbjct: 627 LSNIGLVDSANQLLDEMRKEG-LSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHP 685

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           N  T+ +++      LG++     L + MA K
Sbjct: 686 NKITYTIMING-HCKLGNMKAAAKLLNEMAQK 716



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 162/574 (28%), Positives = 274/574 (47%), Gaps = 41/574 (7%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV+    +F +++N++   G  + A+++F ++ + G+ P V  YN+I+  L    R    
Sbjct: 192 GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEA 251

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                 M+++ ++P++ TY +L+  L K  R D A  +L EM ++G AP+ V Y T++  
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311

Query: 145 ICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            C++G +  A ++      +G+S      N+LI G CK +++E A  LL EM+  G   N
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             T++++I  LC     +++L  + +M +R   PN    T L+ G    G+  EA +LW 
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWY 431

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAV--------------SVSY----------- 294
           R++ +GF  N V  + LIHGLC  GS +EA               S+SY           
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491

Query: 295 ----------QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
                     +M      P++ TY+ L+ G    G +  A  +W+    NG  P+   Y 
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            M+   C+ N   +   L ++M       N V + T I+  C  G +  A +L D M+  
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
                  TY+ L+ GL  +  V  A +L+ E+ K G+  N+V Y  ++ G C+ G + + 
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +L +M I     + IT+ I+I  +CK G +  A +LL+ +   G   PD ++Y +L  
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKG-IVPDAVTYNALTN 730

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G C  G M+EA      M   GI  +  T+  L+
Sbjct: 731 GFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/556 (25%), Positives = 272/556 (48%), Gaps = 41/556 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    L ++M+  GV+ +   + ++I+   + G  ++A +   ++ +  +KP++  Y 
Sbjct: 212 RVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYG 271

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L+   RF   N I   M   G  PN   YN L+   C+   +  A ++  +M + 
Sbjct: 272 VLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISN 331

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA------------------- 170
           G +P++V+  +++   CK  Q+E A  L     +G  V N                    
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA 391

Query: 171 ---------------------LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                                L++GLC+  K  EA  L   ++++G   N +T + +I  
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC+ G+ E +  +L +M  RG   +  S+ +L+      G+  E   L   M+R G  P+
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +  Y+ L+HGLC+ G ++EA  + ++ ++N   P+  TY  +IDG+ KA  +    +++ 
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M++     N V Y  +++  C+N    +A  L + M     P  + T+++ I GL   G
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            VD A +LLD+M++    PN+  Y  L+ G  ++ ++ +   ++ E+    +  N +TY 
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++G C+ G +  A +LL +M  +G   DA+T+N +   +CK+GK+  A+++ D +  G
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751

Query: 510 GEWNPDIISYTSLLWG 525
           G  + D I+YT+L+ G
Sbjct: 752 G-ISLDDITYTTLIDG 766



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 230/488 (47%), Gaps = 5/488 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             D    +L++M   G + +  V+ ++I+ Y R+G    AL++   +   G+ P     N
Sbjct: 282 RFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCN 341

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++      N+      +   M   G   N  T+  ++  LC   R D A   ++EM  +
Sbjct: 342 SLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLR 401

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
              P+    T +VS +C+ G+  EA EL  R     F +     NALI+GLC+    EEA
Sbjct: 402 NFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEA 461

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM++RG+  + I+Y+T+I + C  G VE    +  +M  RG  P+++++  LL G
Sbjct: 462 AKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG 521

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  EA  LW+   + G  P+   Y  +I G C    ++E   +  +M       N
Sbjct: 522 LCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQN 581

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y  LI  + + GN+  A ++ + M S G       Y+ ++  L    +   A+ L++
Sbjct: 582 AVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLD 641

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  E   PN V +   I G C  G++     +L +M      PN  TY  +++G  ++ 
Sbjct: 642 EMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLG 701

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +K A +L+ E+ + GI  + VTYN + +G C+ G + EA ++   M   G  LD IT+ 
Sbjct: 702 NMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYT 761

Query: 485 IIIYAYCK 492
            +I  + K
Sbjct: 762 TLIDGWHK 769


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/543 (29%), Positives = 275/543 (50%), Gaps = 15/543 (2%)

Query: 36  VINSYRRVGLA--EQALKMFYRIREFGLKPTVKIYNHILDALL---AENRFSMINPIYSN 90
           VI S  R G    ++ALK+F  +       +V+ +N +L  +      +    +  +++ 
Sbjct: 18  VIASRARSGSLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTR 77

Query: 91  MKRD---GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           M R+    + PN  TY+IL+   C+  R++  +     +   G   + +  + ++  +C 
Sbjct: 78  MARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCD 137

Query: 148 LGQVEEARELAM----RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
             +V+EA ++ +     FG    V  YN +ING  +E ++E+A+ L  EM+D+GI PNV+
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+T+I  LC    V+ + G+  QM  RG  P+  ++  L+ GYL  G+  E   +   M
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              G  P+ + Y+ L+  LC NG   EA      M      P+V  Y+ L+ G+A  G L
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
                  + M+ NG SPN   +  M     +  M  +A  +  KM  +   P+ V+F   
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I  LC  GRVD A+   +QM      PNI  ++ L+ GL  V + ++A EL  E+   GI
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGI 437

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            ++ V +NT++  +C  G V+EA +L+  M+  G + + I++N ++  +C  G+++ A +
Sbjct: 438 CVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAK 497

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LLD +   G   P+  +YT LL G C +  + +A+   ++ML +G+ P  AT+N ++  L
Sbjct: 498 LLDVMVSNG-LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556

Query: 562 FSN 564
           F  
Sbjct: 557 FQT 559



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 265/556 (47%), Gaps = 6/556 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +    LL +M   G       + +VIN + R G  E+A  +F  + + G+ P V  Y  +
Sbjct: 143 EATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTV 202

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D L           ++  M   G++P+  TYN L+       +     ++L EM   G 
Sbjct: 203 IDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGL 262

Query: 132 APDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFW 186
            PD ++Y  ++  +CK G+  EAR   +   R G    V++Y  L++G   +  + E   
Sbjct: 263 EPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHS 322

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L  MV  G+ PN   ++ +  +      +E ++ I  +M  +G +P++ SF +L+    
Sbjct: 323 FLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALC 382

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  +A   +N+MI EG  PN+  +S+L++GLC+ G  ++A  + +++ +     +  
Sbjct: 383 KLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV 442

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            ++ L+      G ++ A ++ + MI  G  PNV++Y  +V   C      +A  L++ M
Sbjct: 443 FFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVM 502

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 PN  T+   ++G C   RVD A  L  +M      P + TYN +L GL +  R 
Sbjct: 503 VSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRF 562

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA EL   +     + +I TYN IL+G+C+   V EAF++  ++  +  +LD++TFNI+
Sbjct: 563 SEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIM 622

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I A  K G+  +A+ L   I   G   PD+++Y  +   +   G + E       M   G
Sbjct: 623 IGALLKGGRKEDAMDLFATISAYG-LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681

Query: 547 ICPNFATWNVLVRSLF 562
             PN    N LVR L 
Sbjct: 682 TAPNSHMLNALVRRLL 697



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 267/589 (45%), Gaps = 46/589 (7%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           KV   +C+  +   +I  + R+G  E     F  I + G +  V + + +L  L    R 
Sbjct: 85  KVAPNACTYSI---LIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRV 141

Query: 82  SMINPIYS-NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                I    M   G  P+V  YN ++    +  +V+ AY L +EM ++G  P+ V+YTT
Sbjct: 142 DEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTT 201

Query: 141 IVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++  +CK   V+ A+ +  +    GV      YN LI+G     K +E   +L EM   G
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR----- 250
           ++P+ ITY+ ++  LC  G    +      MF +G  P++  +  LL GY   G      
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321

Query: 251 ------------------------------THEASDLWNRMIREGFLPNVVAYSTLIHGL 280
                                           EA  ++N+M ++G  P+VV++  LI  L
Sbjct: 322 SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G +D+AV    QM      PN+  +S+L+ G    G    A +++  ++  G   + 
Sbjct: 382 CKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDA 441

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V +  ++  LC      +A  LI+ M      PN +++NT + G C  GR+D A KLLD 
Sbjct: 442 VFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDV 501

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M      PN  TY  LL G  +  RV +A+ L  E+   G+   + TYNTILHG+ + G 
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
             EA +L   M+   TK D  T+NII+   CK   V+ A ++  R+    +   D +++ 
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL-CSKDPQLDSVTFN 620

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
            ++  +   G  ++A      +   G+ P+  T+ ++  +L    G LG
Sbjct: 621 IMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEE-GSLG 668



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/559 (26%), Positives = 272/559 (48%), Gaps = 7/559 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    L  +M  +G+  +   + +VI+   +  + ++A  +F ++ + G+KP    YN
Sbjct: 176 QVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYN 235

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++   L+  ++  +  +   M   G+EP+  TY +LL  LCKN R   A      M  K
Sbjct: 236 CLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRK 295

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEA 184
           G  PD   Y  ++      G + E    L +  G+GVS    ++N +     K+  IEEA
Sbjct: 296 GIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEA 355

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M  +G+ P+V+++  +I +LC +G V+ ++    QM   G  PNI  F+SL+ G
Sbjct: 356 MHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYG 415

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A +L+  ++ +G   + V ++TL+  LC+ G + EA  +   M      PN
Sbjct: 416 LCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPN 475

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V +Y+ L+ G    G +  A+++ + M+SNG  PN   YT +++  C+      A+SL  
Sbjct: 476 VISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFR 535

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   P   T+NT + GL   GR   A +L   M       +I TYN +L+GL + N
Sbjct: 536 EMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNN 595

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V EAF++   +     QL+ VT+N ++  + + G   +A  L   +   G   D +T+ 
Sbjct: 596 FVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYR 655

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           +I     ++G +     L   +   G   P+     +L+  + + G +  A +YL K+  
Sbjct: 656 LIAENLIEEGSLGEFDGLFSAMEKSGTA-PNSHMLNALVRRLLHRGDISRAGVYLYKLDE 714

Query: 545 EGICPNFATWNVLVRSLFS 563
           +      +T ++L+ SL+S
Sbjct: 715 KNFSLEASTTSMLI-SLYS 732



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/547 (25%), Positives = 258/547 (47%), Gaps = 40/547 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + + QQM   GV    G +  +I+ Y   G  ++ ++M   +   G
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK------------ 108
           L+P    Y  +LD L    R       + +M R G++P+V  Y ILL             
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321

Query: 109 -----------------------ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                  A  K   ++ A  +  +M  +G +PD VS+  ++ ++
Sbjct: 322 SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381

Query: 146 CKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CKLG+V++A  +       GV+    V+++L+ GLC   K E+A  L  E++D+GI  + 
Sbjct: 382 CKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDA 441

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + ++T++ +LC+ G V  +  ++  M   G  PN+ S+ +L+ G+ L GR  EA+ L + 
Sbjct: 442 VFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDV 501

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G  PN   Y+ L+ G C    +D+A S+  +M      P V TY+ ++ G  + G 
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A++++  MI++    ++  Y  ++  LC+NN   +A  +  ++  ++   ++VTFN 
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  L   GR + AM L   +  Y  +P++ TY  + + L+    + E   L + +EK G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              N    N ++  +   G +  A   L K+  +   L+A T +++I  Y +     +A 
Sbjct: 682 TAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAK 741

Query: 501 QLLDRIR 507
            L ++ R
Sbjct: 742 SLPEKYR 748



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 176/377 (46%), Gaps = 13/377 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D       QM  EGV+ +  VF S++     VG  E+A ++F+ + + G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      +N ++  L  E R      +   M R G+ PNV +YN L+   C   R+D A 
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KLL  M + G  P+  +YT ++   CK  +V++A    RE+ M+     V+ YN +++GL
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC--NP 233
            +  +  EA  L   M++     ++ TY+ I++ LC    V+ +     +MF R C  +P
Sbjct: 557 FQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAF----KMFRRLCSKDP 612

Query: 234 NIHS--FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            + S  F  ++   L GGR  +A DL+  +   G +P+VV Y  +   L   GS+ E   
Sbjct: 613 QLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDG 672

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   ME++   PN    +AL+      G++  A     ++     S      + ++ +  
Sbjct: 673 LFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYS 732

Query: 352 QNNMFHQAHSLIEKMAF 368
           +      A SL EK  F
Sbjct: 733 RGEYQPHAKSLPEKYRF 749


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 172/612 (28%), Positives = 287/612 (46%), Gaps = 71/612 (11%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +  K++ V C++     +I+      L ++A+   +R+R     P V  Y  +L   L +
Sbjct: 268 EDFKLDTVLCTQ-----MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKK 322

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I S M  +G  PN   +N L+ + C       AYKLL  M   GC P  V Y
Sbjct: 323 KQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVY 382

Query: 139 TTIVSSICK-----------------------------------------LGQVEEARE- 156
              + SIC                                          +G+ ++A + 
Sbjct: 383 NIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQI 442

Query: 157 --LAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             L MR  F    S Y+ +I  LC+  K+E+AF L  EM   G+ P+V TY+ +I S C 
Sbjct: 443 IKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCK 502

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           VG +E +     +M   GC+P++ ++T+LL  YL   +  +ASD+++RM+  G  PN + 
Sbjct: 503 VGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTIT 562

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQM----------------EENSCPPNVTTYSALIDGFA 316
           YS L+ GLC  G   +A  V  +M                  +S  PNV TY ALIDG  
Sbjct: 563 YSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLC 622

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA  ++ A ++ + M SNGC PN + Y  ++   C+      A  +  +M+     P   
Sbjct: 623 KAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVH 682

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ + I  +    R+D A+K+L QM +  C PN+ TY  ++DGL R+   ++A +L++ +
Sbjct: 683 TYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 742

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           EK G   N+VTY +++ G+ ++G V  + QL  +M+ +G   + +T+ ++I   C  G +
Sbjct: 743 EKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLL 802

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A  LL  ++    W   +  Y S++ G   S     +   L+++ + G+      + +
Sbjct: 803 DEAHSLLSEMK-QTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGL 859

Query: 557 LVRSLFSNLGHL 568
           L+ S FS  G L
Sbjct: 860 LIDS-FSKAGRL 870



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 246/517 (47%), Gaps = 26/517 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D    +++ M  +G       +  VI         E+A  +F  ++  G+ P V  Y 
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D+             +  M+  G  P+V TY  LL A  K  +V  A  +   M + 
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF---------------------GSGVSVY 168
           GCAP+ ++Y+ +V  +CK G+ ++A E+  +                         V  Y
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
            ALI+GLCK HK+ +A  LL  M   G +PN I Y  +I   C VG ++ +  +  +M  
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  P +H++TSL+       R   A  + ++M+     PNVV Y+ +I GLC  G   +
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQK 734

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ +   ME+  C PNV TY++LIDG  K+G +  + Q++ +MI+ GC+PN V Y  ++ 
Sbjct: 735 ALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLIN 794

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C   +  +AHSL+ +M     P     + + ++G     +   ++ LL++++ +  + 
Sbjct: 795 HCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVS 852

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV---TYNTILHGVCRAGMVVEAF 465
               Y  L+D   +  R+++A EL  E+ +    LNI    TY +++  +C A  + +AF
Sbjct: 853 IAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAF 912

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +L  ++  +G   +   F  +I    K  K N A+QL
Sbjct: 913 ELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQL 949



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 281/618 (45%), Gaps = 64/618 (10%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K ++   + ++  M  EG + +  +F S+++SY        A K+  R+   G  P   
Sbjct: 321 KKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYV 380

Query: 67  IYNHIL------DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +YN  +      + L + +  ++   +Y  M       N        + LC   + D A+
Sbjct: 381 VYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAF 440

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +++  M  KG  PD  +Y+ +++ +C+  +VE+A  L     S      V  Y  LI+  
Sbjct: 441 QIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSF 500

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   IE+A     EM   G  P+V+TY+ ++ +      V  +  I  +M   GC PN 
Sbjct: 501 CKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNT 560

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI----------------REGFLPNVVAYSTLIHG 279
            ++++L+ G    G + +A +++ +MI                 +   PNVV Y  LI G
Sbjct: 561 ITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDG 620

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC    + +A  +   M  N C PN   Y ALIDGF K G L  A +++ RM   G  P 
Sbjct: 621 LCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPT 680

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++  + ++     A  ++ +M   +C PN VT+   I GLC  G    A+KLL 
Sbjct: 681 VHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLS 740

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M++  C PN+ TY  L+DGL +  +V  + +L T++   G   N VTY  +++  C AG
Sbjct: 741 MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAG 800

Query: 460 MVVEAFQLLGKM----------------------------LIE-----GTKLDAITFNII 486
           ++ EA  LL +M                            L+E     G    A  + ++
Sbjct: 801 LLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLL 860

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS---YTSLLWGICNSGGMQEAFIYLQKML 543
           I ++ K G++  A++L   +      + +I S   YTSL+  +C +  +++AF    ++ 
Sbjct: 861 IDSFSKAGRLEKALELHKEMMEVSS-SLNITSKDTYTSLIQALCLASQLEKAFELYSEIT 919

Query: 544 NEGICPNFATWNVLVRSL 561
            +G+ P  + +  L++ L
Sbjct: 920 RKGVVPELSAFICLIKGL 937



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 251/530 (47%), Gaps = 29/530 (5%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           +G  ++A ++   +   G  P    Y+ ++  L    +      ++  MK  G+ P+V+T
Sbjct: 433 MGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYT 492

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF- 161
           Y IL+ + CK   ++ A     EM + GC+P  V+YT ++ +  K  QV +A ++  R  
Sbjct: 493 YTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMV 552

Query: 162 ----GSGVSVYNALINGLCKEHKIEEA-----------------FWLLCEMVDRGIDPNV 200
                     Y+AL++GLCK  + ++A                 F+   E  D  I PNV
Sbjct: 553 DAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTD-SIAPNV 611

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY  +I  LC    V  +  +L  M   GC PN   + +L+ G+   G+   A +++ R
Sbjct: 612 VTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFR 671

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M + G+LP V  Y++LI  +  +  +D A+ V  QM E+SC PNV TY+A+IDG  + G 
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A ++ + M   GC+PNVV YT ++  L ++     +  L  +M  + C PN VT+  
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRV 791

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I   C  G +D A  LL +MKQ      +  Y  ++ G  +  +   +  L+ E+E  G
Sbjct: 792 LINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHG 849

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI---TFNIIIYAYCKQGKVN 497
           +      Y  ++    +AG + +A +L  +M+   + L+     T+  +I A C   ++ 
Sbjct: 850 MVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLE 909

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            A +L   I   G   P++ ++  L+ G+       EA      M +EG+
Sbjct: 910 KAFELYSEITRKGVV-PELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 262/611 (42%), Gaps = 95/611 (15%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G   +AL+   R+++FG +P+   YN ++  L    +  M   +   M   G   + F
Sbjct: 184 RHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243

Query: 102 TYNILLKALCKNNR--------------------------------VDGAYKLLVEMGNK 129
           T     +ALCK  R                                 D A   L  M   
Sbjct: 244 TVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCN 303

Query: 130 GCAPDAVSYTTIVSSICKLGQVEE-ARELAMRFGSGV----SVYNALINGLCKEHKIEEA 184
            C P+ V+Y T+++   K  Q+    R ++M    G     S++N+L++  C       A
Sbjct: 304 SCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYA 363

Query: 185 FWLLCEMVDRGIDPNVITYSTIISS----------------------------------- 209
           + LL  M   G  P  + Y+  I S                                   
Sbjct: 364 YKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNT 423

Query: 210 ------LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
                 LC +G  + +  I+  M  +G  P+  +++ ++       +  +A  L+  M  
Sbjct: 424 ANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 483

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G +P+V  Y+ LI   C  G +++A S   +ME   C P+V TY+AL+  + K   +  
Sbjct: 484 VGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQ 543

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA-----------FE--- 369
           AS I++RM+  GC+PN + Y+ +V  LC+     +A  +  KM            FE   
Sbjct: 544 ASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEH 603

Query: 370 --NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
             +  PN VT+   I GLC   +V  A +LLD M    C PN   Y+ L+DG  +V ++ 
Sbjct: 604 TDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLD 663

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A E+   + KCG    + TY +++  + +   +  A ++L +ML      + +T+  +I
Sbjct: 664 NAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMI 723

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              C+ G+   A++LL  +   G  NP++++YTSL+ G+  SG +  +     +M+ +G 
Sbjct: 724 DGLCRIGECQKALKLLSMMEKRG-CNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGC 782

Query: 548 CPNFATWNVLV 558
            PN+ T+ VL+
Sbjct: 783 APNYVTYRVLI 793



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 228/491 (46%), Gaps = 61/491 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E  +++    L Q+MK  GV      +  +I+S+ +VGL EQA   F  +   G
Sbjct: 461 VITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR----- 115
             P+V  Y  +L A L   +    + I+  M   G  PN  TY+ L+  LCK        
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580

Query: 116 -------------------------------------VDG---------AYKLLVEMGNK 129
                                                +DG         A +LL  M + 
Sbjct: 581 EVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+ + Y  ++   CK+G+++ A+E+  R         V  Y +LI+ + K+ +++ A
Sbjct: 641 GCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 700

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L +M++    PNV+TY+ +I  LC +G  + +L +L  M  RGCNPN+ ++TSL+ G
Sbjct: 701 IKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDG 760

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+   +  L+ +MI +G  PN V Y  LI+  C+ G +DEA S+  +M++   P  
Sbjct: 761 LGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKY 820

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V  Y +++ GF+K    + +  +   + S+G       Y  ++    +     +A  L +
Sbjct: 821 VQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHK 878

Query: 365 KMAFENCPPNTV---TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +M   +   N     T+ + I+ LC   +++ A +L  ++ +   +P ++ +  L+ GL+
Sbjct: 879 EMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLI 938

Query: 422 RVNRVKEAFEL 432
           +VN+  EA +L
Sbjct: 939 KVNKWNEALQL 949



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 140/595 (23%), Positives = 238/595 (40%), Gaps = 64/595 (10%)

Query: 30  EGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           + V ++V+ S R     E  ++ F +  R+ G   T   YN + + L  ++R      + 
Sbjct: 104 DAVVVAVLRSVRT---PELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLL 160

Query: 89  SNMKRDGMEPNVFTYNILLKALCKN----------------------------------- 113
             +  D  E      N++++  C++                                   
Sbjct: 161 REIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATA 220

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--FGSGVSVYNAL 171
            ++D  +++  EM   G   D  +      ++CK G+  +A  +  R  F     +   +
Sbjct: 221 GQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQM 280

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+GL +    +EA   L  M      PNV+TY T+++       +     I+  M   GC
Sbjct: 281 ISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGC 340

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE--- 288
           NPN   F SL+  Y        A  L NRM   G  P  V Y+  I  +CS   +     
Sbjct: 341 NPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDL 400

Query: 289 ---AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
              A  V  +M  +SC  N    +         G    A QI   M+  G  P+   Y+ 
Sbjct: 401 LALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSK 460

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+     +A  L ++M      P+  T+   I   C  G ++ A    D+M+   
Sbjct: 461 VITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C P++ TY  LL   L+  +V +A ++   +   G   N +TY+ ++ G+C+AG   +A 
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580

Query: 466 QLLGKML-----------IEGTKLDAITFNIIIY-----AYCKQGKVNNAIQLLDRIRGG 509
           ++  KM+            EG   D+I  N++ Y       CK  KV +A +LLD +   
Sbjct: 581 EVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G   P+ I Y +L+ G C  G +  A     +M   G  P   T+  L+ ++F +
Sbjct: 641 G-CEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKD 694



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 35/372 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++   Q LL  M   G   +  ++ ++I+ + +VG  + A ++F+R+ + G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PTV  Y  ++DA+  + R  +   + S M      PNV TY  ++  LC+      A 
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLL  M  +GC P+ V+YT+                              LI+GL K  K
Sbjct: 737 KLLSMMEKRGCNPNVVTYTS------------------------------LIDGLGKSGK 766

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++ +  L  +M+ +G  PN +TY  +I+  C  G ++ +  +L +M        +  + S
Sbjct: 767 VDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCS 826

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +++G+    +   +  L   +   G +     Y  LI      G +++A+ +  +M E S
Sbjct: 827 VVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVS 884

Query: 301 CPPNVT---TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              N+T   TY++LI     A  L  A ++++ +   G  P + A+ C++K L + N ++
Sbjct: 885 SSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWN 944

Query: 358 QAHSLIEKMAFE 369
           +A  L   M  E
Sbjct: 945 EALQLCYSMCDE 956



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 41/273 (15%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ + +   +D    +L QM     + +   + ++I+   R+G  ++ALK+   + + G
Sbjct: 687 LIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRG 746

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L    +  M   +++ M   G  PN  TY +L+   C    +D A+
Sbjct: 747 CNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAH 806

Query: 121 KLLVEMG---------------------------------NKGCAPDAVSYTTIVSSICK 147
            LL EM                                  + G    A  Y  ++ S  K
Sbjct: 807 SLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSK 866

Query: 148 LGQVEEAREL---AMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            G++E+A EL    M   S +++     Y +LI  LC   ++E+AF L  E+  +G+ P 
Sbjct: 867 AGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPE 926

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +  +  +I  L  V     +L +   M   G N
Sbjct: 927 LSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN 959


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 280/565 (49%), Gaps = 43/565 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++ +VIN + + G  +QA ++   ++E G+K  V +++ ++  L  + R   I+      
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGR---IDEALEQF 57

Query: 92  KRDGME--PNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-----GCAPDAVSYTTIVSS 144
           K  G E  PNV TYN ++  LCK NR+D   +L  +M  +     GC PD +SY+T++ +
Sbjct: 58  KSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDA 117

Query: 145 ICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK  +V++A E   R         V  Y++LI+GLCK  +++EA+ LL ++    + P 
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            + Y+ +++     G     L +L  M  +G   NI  F ++L          +A   + 
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           R+++ G  PNVV Y+  +HGLC  G +DEA  +  +M E+   P+V TYS++IDGF KAG
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A  ++ RM+ + C P+ V +  ++    ++    +A  + E M      P   T+N
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             +  +CG   V+ A+++  +MK+ +  P+  TY  L+  L R  RV EA E +  +E  
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVME-- 415

Query: 440 GIQLNIVTYNTILHG-----------------------VCRAGMVVEAFQLLGKMLIEGT 476
               N+V    I H                        +C+AG   EA +++ +M+++G 
Sbjct: 416 --ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGV 473

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + D  T+  ++ + C   +V++AI   +++   G   P +++YT L+   C++    +AF
Sbjct: 474 RPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRG-CAPGLVTYTLLIGEACSADMADDAF 532

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
              + M+  G  P   T   L   L
Sbjct: 533 RIFEAMVAAGFTPQAQTMRTLSSCL 557



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 192/416 (46%), Gaps = 24/416 (5%)

Query: 9   CEIDGVQ---YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C++D V     LL Q+K E +      + +V+N ++R G   + L++   ++E G    +
Sbjct: 154 CKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINI 213

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             +N +L AL   +        +  + + G +PNV TYN+ +  LCK  +VD AY++L+E
Sbjct: 214 IDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLE 273

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHK 180
           M      PD ++Y++I+   CK G++++A ++  R      +     +  L++G  +  K
Sbjct: 274 MVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKK 333

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             EAF +  +MV+ G  P + TY+ ++  +C   +VE++L I  +M  +   P+ +++  
Sbjct: 334 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAP 393

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L++      R  EA +  + M  +  +PN      L+  LC  G +DEA SV   + E  
Sbjct: 394 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE-- 451

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
                           KAG    A ++  +M+  G  P+   Y  +++ LC  +    A 
Sbjct: 452 --------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAI 497

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           +  EKMA   C P  VT+   I   C     D A ++ + M      P   T   L
Sbjct: 498 AEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/486 (23%), Positives = 219/486 (45%), Gaps = 46/486 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D      ++M+  G + +   + S+I+   +V   ++A  +  +++   
Sbjct: 114 VIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGED 173

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN +++    + + S    +  +MK  G   N+  +N +L AL KN+  + A 
Sbjct: 174 MVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKAC 233

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +    +   G  P+ V+Y   V  +CK G+V+EA                          
Sbjct: 234 QFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEA-------------------------- 267

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
               + +L EMV+  + P+VITYS+II   C  G ++ +  +  +M V  C P+  +F +
Sbjct: 268 ----YRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL G+    ++ EA  +   M+  GF+P +  Y+ L+  +C   S++ A+ + ++M+   
Sbjct: 324 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  TY+ LI    +A  +  A +  + M ++   PN      +V+VLC+     +A 
Sbjct: 384 RQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 443

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           S+++         N V        +C  G  D A+++++QM      P+  TY  +L  L
Sbjct: 444 SVLD---------NVVE-------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSL 487

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             ++RV  A     ++   G    +VTY  ++   C A M  +AF++   M+  G    A
Sbjct: 488 CGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQA 547

Query: 481 ITFNII 486
            T   +
Sbjct: 548 QTMRTL 553



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 11/255 (4%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F+++++ +     + +A ++   +   G  P ++ YN ++D +   +       IY  MK
Sbjct: 321 FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 380

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R   +P+  TY  L++ LC+  RVD A + L  M      P+      +V  +CK G+V+
Sbjct: 381 RKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 440

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           EA           SV + ++  +CK  + +EA  ++ +MV +G+ P+  TY  ++ SLC 
Sbjct: 441 EA----------CSVLDNVVE-ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCG 489

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +  V++++    +M  RGC P + ++T L+          +A  ++  M+  GF P    
Sbjct: 490 LDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQT 549

Query: 273 YSTLIHGLCSNGSMD 287
             TL   L   G  D
Sbjct: 550 MRTLSSCLRDAGYQD 564


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 171/539 (31%), Positives = 264/539 (48%), Gaps = 15/539 (2%)

Query: 39  SYRRVGLAEQAL--KMFYR-IREFGLK--PTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           S RR    E  L   +F R IRE  +K  P    Y+ ++       R       +  + +
Sbjct: 63  SGRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILK 122

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVE 152
            G   N    N LLK LC   R+  A  +LV+ M   GC PD VSY T++   C   + E
Sbjct: 123 SGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAE 182

Query: 153 EARELAMRFGSG--------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           EA EL               V  Y  +ING   E ++++A+ L  EM+DRGI PNV+TY+
Sbjct: 183 EALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYT 242

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I  LC    V+ + G+  QM  +G  P+  ++  L+ GYL  G+  E   +   M   
Sbjct: 243 TVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAH 302

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+   Y +L++ LC+NG   EA  +   M      PNV  Y  LI G+A  G L   
Sbjct: 303 GLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEM 362

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             + N M+ NG SP+   +  +     +  M  +A  +  KM  +   P+ V +   I  
Sbjct: 363 HDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDA 422

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC  GRVD A+   +QM      PNI  +N L+ GL  V++ ++A E   E+   GI+ +
Sbjct: 423 LCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPD 482

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +V +NTIL  +C  G V++A +L+  M   GT+   I++  +I  +C  G+++ A + LD
Sbjct: 483 VVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLD 542

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            +   G   PD  +Y +LL G C +G + +A+   ++ML  GI P   T++ ++  LF+
Sbjct: 543 VMLSVG-LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 281/589 (47%), Gaps = 50/589 (8%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           +KV    C+  +   +I  + R+G  E     F  I + G +    + N +L  L    R
Sbjct: 88  IKVTPDPCTYSI---LIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKR 144

Query: 81  F-SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN---KGCAPDAV 136
               ++ +   M   G  P+V +YN LLK  C   R + A +LL  M +   + C P+ V
Sbjct: 145 LCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVV 204

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  +++     GQV++A  L +          V  Y  +I+GLCK   ++ A  +  +M
Sbjct: 205 SYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM 264

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D+G+ P+  TY+ +I     +G  +  + +L +M   G  P+ +++ SLL      GR 
Sbjct: 265 IDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM------------------------- 286
            EA  L++ MIR+G  PNV  Y  LIHG  + G++                         
Sbjct: 325 REARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384

Query: 287 ----------DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                     DEA+ +  +M++    P+V  Y ALID   K G +  A   +N+M++ G 
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV 444

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +PN+  +  +V  LC  + + +A     +M  +   P+ V FNT +  LC  G+V  A +
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+D M++    P + +Y  L+ G   V R+ EA + +  +   G++ +  TYNT+LHG C
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWNPD 515
           RAG + +A+ +  +ML  G     +T++ I++      + + A +L L+ I  G +WN  
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWN-- 622

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           I  Y  +L G+  +  + EAF   Q + ++       T+N+++ +LF +
Sbjct: 623 IWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKS 671



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 248/560 (44%), Gaps = 44/560 (7%)

Query: 46  AEQALKMFYRIREF---GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           AE+AL++ + + +       P V  Y  +++    E +      ++  M   G++PNV T
Sbjct: 181 AEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVT 240

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRF 161
           Y  ++  LCK   VD A  +  +M +KG  PD  +Y  ++     +G+ +E  R L    
Sbjct: 241 YTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMS 300

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
             G+      Y +L+N LC   +  EA +L   M+ +GI PNV  Y  +I      G + 
Sbjct: 301 AHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALS 360

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
               +L  M   G +P+ H F  +   Y       EA  ++N+M ++G  P+VV Y  LI
Sbjct: 361 EMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALI 420

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC  G +D+AV    QM      PN+  +++L+ G         A + +  M++ G  
Sbjct: 421 DALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIR 480

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+VV +  ++  LC      +A  LI+ M      P  +++ T I G C  GR+D A K 
Sbjct: 481 PDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKS 540

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH---- 453
           LD M      P+  TYN LL G  R  R+ +A+ +  E+ + GI   +VTY+TILH    
Sbjct: 541 LDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFT 600

Query: 454 -------------------------------GVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
                                          G+ +   V EAF+L   +  +  +L+  T
Sbjct: 601 TRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           FNI+I A  K G+  +A+ L   I   G   PD+ +Y  +   +   G ++E       M
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYG-LVPDVFTYCLIAENLIEEGYLEEFDDLFSAM 719

Query: 543 LNEGICPNFATWNVLVRSLF 562
              G  PN    N LVR L 
Sbjct: 720 EKSGTTPNSRMLNALVRRLL 739



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 248/499 (49%), Gaps = 5/499 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +L++M   G+      + S++N     G   +A  +F  +   G+KP V IY  ++ 
Sbjct: 292 VVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIH 351

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               +   S ++ + + M  +G+ P+   +NI+  A  K   +D A  +  +M  +G +P
Sbjct: 352 GYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSP 411

Query: 134 DAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           D V+Y  ++ ++CKLG+V++A  +       GV+    V+N+L+ GLC   K E+A    
Sbjct: 412 DVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFY 471

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM+++GI P+V+ ++TI+ +LC  G V  +  ++  M   G  P + S+T+L+ G+ L 
Sbjct: 472 FEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLV 531

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR  EA+   + M+  G  P+   Y+TL+HG C  G +D+A  V  +M  N   P V TY
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S ++ G         A +++  MI++G   N+  Y  ++  L +NN   +A  L + +  
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           ++      TFN  I  L   GR + AM L   +  Y  +P++ TY  + + L+    ++E
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
             +L + +EK G   N    N ++  +   G +  A   L K+  +   L+A T  ++I 
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771

Query: 489 AYCKQGKVNNAIQLLDRIR 507
              +    ++A  L ++ R
Sbjct: 772 LLSRDEYHHHATSLPEKYR 790



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/563 (24%), Positives = 258/563 (45%), Gaps = 6/563 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L  +M   G+  +   + +VI+   +  + ++A  +F ++ + G+KP    YN
Sbjct: 218 QVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYN 277

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++   L+  ++  +  +   M   G++P+ +TY  LL  LC N R   A  L   M  K
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRK 337

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEA 184
           G  P+   Y  ++      G + E  +L  +   +G+S    ++N +     K+  I+EA
Sbjct: 338 GIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEA 397

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M  +G+ P+V+ Y  +I +LC +G V+ ++    QM   G  PNI  F SL+ G
Sbjct: 398 MHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  +A + +  M+ +G  P+VV ++T++  LC+ G + +A  +   ME     P 
Sbjct: 458 LCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPG 517

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V +Y+ LI G    G +  A++  + M+S G  P+   Y  ++   C+      A+ +  
Sbjct: 518 VISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFR 577

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P  VT++T + GL    R   A +L   M       NI  YN +L+GL + N
Sbjct: 578 EMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNN 637

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V EAF+L   +     QL I T+N ++  + ++G   +A  L   +   G   D  T+ 
Sbjct: 638 CVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYC 697

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           +I     ++G +     L   +   G   P+     +L+  + + G +  A  YL K+  
Sbjct: 698 LIAENLIEEGYLEEFDDLFSAMEKSGT-TPNSRMLNALVRRLLHRGDITRAGAYLCKLDE 756

Query: 545 EGICPNFATWNVLVRSLFSNLGH 567
           +      +T  +L+  L  +  H
Sbjct: 757 KNFSLEASTTAMLISLLSRDEYH 779



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 192/399 (48%), Gaps = 5/399 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     K  +  +  LL  M   G+S    +F  +  +Y +  + ++A+ +F ++++ G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y  ++DAL    R       ++ M  +G+ PN+F +N L+  LC  ++ + A 
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGS--GVSVYNALINGL 175
           +   EM N+G  PD V + TI+ ++C  GQV +A+   +L  R G+  GV  Y  LI G 
Sbjct: 469 EFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGH 528

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +I+EA   L  M+  G+ P+  TY+T++   C  G ++ + G+  +M   G  P +
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++++L G     R  EA +L+  MI  G   N+  Y+ +++GL  N  +DEA  +   
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +        +TT++ +I    K+G    A  ++  + S G  P+V  Y  + + L +   
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
             +   L   M      PN+   N  ++ L   G +  A
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  265 bits (676), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 169/528 (32%), Positives = 275/528 (52%), Gaps = 7/528 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL-AENRFSMINPIYSNMKRDGMEP 98
           Y +  L E+ L +FY++   GL P VK  N +L  L   +N   +   +Y+ M   G+ P
Sbjct: 141 YVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICP 200

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL- 157
            V TYN +L + CK   V  A +LL +M   GC+P+ V+Y  +V+ +   G++E+A+EL 
Sbjct: 201 TVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELI 260

Query: 158 --AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              +R G  VSVY  + LI G C++ +IEEA  L  EM+ RG  P V+TY+TI+  LC  
Sbjct: 261 QDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKW 320

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V  +  +L  M  +   P++ S+ +L+ GY   G   EA  L+  +      P+VV Y
Sbjct: 321 GRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTY 380

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLI GLC  G +D A+ +  +M ++   P+V T++  + GF K GNL  A ++++ M++
Sbjct: 381 NTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLN 440

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  P+  AY   +    +     +A  + E+M     PP+ +T+N FI GL   G +  
Sbjct: 441 RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKE 500

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +L+ +M     +P+  TY  ++   L    +++A  L  E+   GI  ++VTY  ++H
Sbjct: 501 ASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIH 560

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
                G +  A     +M  +G   + IT+N +I   CK  K++ A      ++  G  +
Sbjct: 561 SYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKG-IS 619

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  +YT L+   CN G  QEA    + ML+  I P+  T   L++ L
Sbjct: 620 PNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667



 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 256/492 (52%), Gaps = 6/492 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G+  +   + ++++S+ + G+ ++AL++ ++++  G  P    YN +++ L         
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +  +M R G+E +V+TY+ L++  C+  +++ A +L  EM ++G  P  V+Y TI+  
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316

Query: 145 ICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK G+V +AR+L            +  YN LI G  +   I EAF L  E+  R + P+
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY+T+I  LC +G+++ ++ +  +M   G +P++ +FT+ ++G+   G    A +L++
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M+  G  P+  AY T I G    G   +A  +  +M     PP++ TY+  IDG  K G
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           NL  AS++  +M+ NG  P+ V YT ++          +A +L  +M  +   P+ VT+ 
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYT 556

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I      GR+  A+    +M +    PN+ TYN L++GL +V ++ +A+    E++  
Sbjct: 557 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK 616

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  N  TY  +++  C  G   EA +L   ML    + D+ T   ++    K  K+ + 
Sbjct: 617 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL-HV 675

Query: 500 IQLLDRIRGGGE 511
           ++ L+ +   GE
Sbjct: 676 VRHLENVIAAGE 687



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 271/515 (52%), Gaps = 15/515 (2%)

Query: 63  PTVKIYNHILDALL----AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC-KNNRVD 117
           P+VK+   ILD LL     ++       ++  M   G+ P+V   N +L+ L  ++N +D
Sbjct: 128 PSVKL---ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNID 184

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALI 172
            A ++   M   G  P  V+Y T++ S CK G V+EA +L     AM        YN L+
Sbjct: 185 VAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLV 244

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NGL    ++E+A  L+ +M+  G++ +V TY  +I   C+ G +E +  +  +M  RG  
Sbjct: 245 NGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAV 304

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P + ++ +++ G    GR  +A  L + M+ +  +P++V+Y+TLI+G    G++ EA  +
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             ++   S  P+V TY+ LIDG  + G+L  A ++ + MI +G  P+V  +T  V+  C+
Sbjct: 365 FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCK 424

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A  L ++M      P+   + T I G    G    A  + ++M      P++ T
Sbjct: 425 MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 484

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN  +DGL ++  +KEA ELV ++   G+  + VTY +I+H    AG + +A  L  +ML
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G     +T+ ++I++Y  +G++  AI     +   G  +P++I+Y +L+ G+C    M
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKG-VHPNVITYNALINGLCKVRKM 603

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            +A+ +  +M  +GI PN  T+ +L+     NLGH
Sbjct: 604 DQAYNFFAEMQAKGISPNKYTYTILINE-NCNLGH 637



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 219/457 (47%), Gaps = 5/457 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   +K  +     LL QM+  G S ++  +  ++N     G  EQA ++   +   G
Sbjct: 208 MLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLG 267

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+ +V  Y+ ++     + +    + +   M   G  P V TYN ++  LCK  RV  A 
Sbjct: 268 LEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDAR 327

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KLL  M NK   PD VSY T++    +LG + EA     EL  R     V  YN LI+GL
Sbjct: 328 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGL 387

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   ++ A  L  EM+  G DP+V T++T +   C +GN+  +  +  +M  RG  P+ 
Sbjct: 388 CRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDR 447

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ + + G L  G   +A  +   M+  GF P+++ Y+  I GL   G++ EA  +  +
Sbjct: 448 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 507

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N   P+  TY+++I     AG+L  A  ++  M+S G  P+VV YT ++        
Sbjct: 508 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGR 567

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A     +M  +   PN +T+N  I GLC   ++D A     +M+     PN  TY  
Sbjct: 568 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTI 627

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           L++    +   +EA  L  ++    IQ +  T+ ++L
Sbjct: 628 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 172/554 (31%), Positives = 291/554 (52%), Gaps = 15/554 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           V  L + M  +G   S   F ++I  +    RV + E  L +   + +F   P V  +N 
Sbjct: 231 VWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHL---MPKFMCSPDVVTFNI 287

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++A     R  +       M R G+EP+V T+  +L ALC+   V  A KL   + + G
Sbjct: 288 LINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG 347

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS----VYNALINGLCKEHKIEEA 184
            AP+A  Y T++    K  +V +A  L   MR  +GVS     +N L+ G  K  +IE++
Sbjct: 348 IAPNAAIYNTLMDGYFKAREVAQASLLYEEMR-TTGVSPDCVTFNILVWGHYKYGRIEDS 406

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL +++  G+  +   Y  ++SSLC  G ++ ++ +L ++  +G   ++ +F SL+  
Sbjct: 407 DRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGA 466

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +A + +  M+R GF P+    ++L+ GLC  G + EA  + Y+M E   P N
Sbjct: 467 YSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPIN 526

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+ L+DG+ K  NL GA  +W  M   G  P+ VA+T ++  L +     +A+ +  
Sbjct: 527 KVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFL 586

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M+     PN   +N+ I+GLC CGRV  A+KL  +M+Q   L +  T+N ++DG  R  
Sbjct: 587 EMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRG 646

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           ++K A E   ++++ G+  +I T+N ++ G C+A  +V A +++ KM   G   D  T+N
Sbjct: 647 QMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYN 706

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
             ++ YC+  K+N A+ +LD++   G   PD ++Y ++L GIC S  +  A I   K+L 
Sbjct: 707 TYMHGYCRMRKMNQAVIILDQLISAG-IVPDTVTYNTMLSGIC-SDILDRAMILTAKLLK 764

Query: 545 EGICPNFATWNVLV 558
            G  PN  T N+L+
Sbjct: 765 MGFIPNVITTNMLL 778



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 237/546 (43%), Gaps = 84/546 (15%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  M   GV  S   F +++++  R G   +A K+F  I++ G+ P   IYN ++D    
Sbjct: 305 LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFK 364

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILL------------------------------ 107
               +  + +Y  M+  G+ P+  T+NIL+                              
Sbjct: 365 AREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSL 424

Query: 108 -----KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS------------------ 144
                 +LC   R+D A KLL E+  KG     V++ +++ +                  
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484

Query: 145 -----------------ICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIE 182
                            +C+ G ++EAR L  R     F      Y  L++G  K + +E
Sbjct: 485 RCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLE 544

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A +L  EM +RGI P+ + ++ +I  L   GNVE +  +  +M   G  PN  ++ SL+
Sbjct: 545 GAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLI 604

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           +G    GR  EA  L   M ++G L +   ++ +I G C  G M  A+     M+     
Sbjct: 605 RGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLL 664

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P++ T++ LI G+ KA +++GA +I N+M S G  P++  Y   +   C+    +QA  +
Sbjct: 665 PDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVII 724

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           ++++      P+TVT+NT + G+C    +D AM L  ++ +   +PN+ T N LL    +
Sbjct: 725 LDQLISAGIVPDTVTYNTMLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCK 783

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
               ++A     ++ +     + ++Y  +    C     VE        L+ GT    + 
Sbjct: 784 QGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQDDVE--------LVRGTYEKHLF 835

Query: 483 FNIIIY 488
            + ++Y
Sbjct: 836 MDFLMY 841



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 172/365 (47%), Gaps = 8/365 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L     +D    LLQ++  +G++ S   F S+I +Y R GL ++A + +  +   G
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCG 487

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+    N +L  L  +        +   M   G   N   Y +LL    K N ++GA 
Sbjct: 488 FTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQ 547

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L  EM  +G  PDAV++T ++  + K G VEEA E+     A+ F      YN+LI GL
Sbjct: 548 FLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGL 607

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ EA  L  EM  +G+  +  T++ II   C  G ++ ++     M   G  P+I
Sbjct: 608 CDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDI 667

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  L+ GY        A ++ N+M   G  P++  Y+T +HG C    M++AV +  Q
Sbjct: 668 FTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQ 727

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN-RMISNGCSPNVVAYTCMVKVLCQNN 354
           +      P+  TY+ ++ G     ++L  + I   +++  G  PNV+    ++   C+  
Sbjct: 728 LISAGIVPDTVTYNTMLSGI--CSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQG 785

Query: 355 MFHQA 359
           M  +A
Sbjct: 786 MPEKA 790



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 199/442 (45%), Gaps = 37/442 (8%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R  AM + S  SV N L+ G        EA  +L  M   G+ P + + + ++  L  +G
Sbjct: 168 RNHAM-YESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIG 226

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           +  +   +   M  +G  P+  +F +++ G+    R      L + M +    P+VV ++
Sbjct: 227 DYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFN 286

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI+  C  G    A+   + M  +   P+V T++ ++    + GN++ A ++++ +   
Sbjct: 287 ILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDM 346

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG---------- 384
           G +PN   Y  ++    +     QA  L E+M      P+ VTFN  + G          
Sbjct: 347 GIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDS 406

Query: 385 -------------------------LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
                                    LC  GR+D AMKLL ++ +     ++  +N L+  
Sbjct: 407 DRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGA 466

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             R     +AFE    + +CG   +  T N++L G+CR G + EA  LL +ML +G  ++
Sbjct: 467 YSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPIN 526

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            + + +++  Y K   +  A  L   ++  G + PD +++T+L+ G+  +G ++EA+   
Sbjct: 527 KVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIY-PDAVAFTALIDGLSKAGNVEEAYEVF 585

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
            +M   G  PN   +N L+R L
Sbjct: 586 LEMSAIGFVPNNFAYNSLIRGL 607


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 282/530 (53%), Gaps = 11/530 (2%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN---PIYSNMKRDGM 96
           Y +  + E+ L +FY++   G+ P +K  N +L  L   +R S I+    +Y+ M   G+
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLL--RDRDSSIDVAREVYNVMVECGI 186

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P V TYN +L + CK  +V  A +LL++M   GC P+ V+Y  +V+ +   G++E+A+E
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 157 L---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L    +R G  VS   Y+ LI G C++ +++EA  L  EM+ RG  P ++TY+TI+  LC
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G V  +  +L  M  +   P++ S+ +L+ GY   G   EA  L+  +   G +P+VV
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TLI GLC  G +D A+ +  +M ++   P+V T++ L+ GF K GNL  A ++++ M
Sbjct: 367 TYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           ++ G  P+  AY   +    +     +A  + E+M     PP+ +T+N FI GL   G +
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A +L+ +M     +P+  TY  ++   L    +++A  +  E+   GI  ++VTY  +
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +H     G +  A     +M  +G   + IT+N +I   CK  K++ A +    ++  G 
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKG- 605

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +P+  +YT L+   CN G  QEA    + ML+  I P+  T + L++ L
Sbjct: 606 ISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL 655



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 257/492 (52%), Gaps = 6/492 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G+  +   + ++++S+ + G  ++AL++  ++++ G  P    YN +++ L         
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQA 244

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   M R G+E + +TY+ L++  C+  ++D A +L  EM ++G  P  V+Y TI+  
Sbjct: 245 KELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYG 304

Query: 145 ICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK G+V +AR+L            +  YN LI G  +   I EAF L  E+  RG+ P+
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY+T+I  LC +G+++ ++ +  +M   G +P++ +FT L++G+   G    A +L++
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M+  G  P+  AY T I G    G   +A  +  +M     PP++ TY+  IDG  K G
Sbjct: 425 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 484

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           NL  AS++  +M+ NG  P+ V YT ++          +A ++  +M  +   P+ VT+ 
Sbjct: 485 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYT 544

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I      GR+  A+    +M +    PN+ TYN L++GL +V ++ +A++  TE++  
Sbjct: 545 VLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  N  TY  +++  C  G   EA +L   ML    + D+ T + ++    K  K ++ 
Sbjct: 605 GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK-SHV 663

Query: 500 IQLLDRIRGGGE 511
           ++ L+ +   GE
Sbjct: 664 VRHLENVIAAGE 675



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 219/457 (47%), Gaps = 5/457 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   ++ ++     LL QM+  G   ++  +  ++N     G  EQA ++   +   G
Sbjct: 196 MLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG 255

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+ +   Y+ ++     + +    + +   M   G  P + TYN ++  LCK  RV  A 
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KLL  M NK   PD VSY T++    +LG + EA     EL  R     V  YN LI+GL
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   ++ A  L  EM+  G DP+V T++ ++   C +GN+  +  +  +M  RG  P+ 
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ + + G L  G   +A  +   M+  GF P+++ Y+  I GL   G++ EA  +  +
Sbjct: 436 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 495

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N   P+  TY+++I     AG+L  A  ++  M+S G  P+VV YT ++        
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A     +M  +   PN +T+N  I GLC   ++D A K   +M+     PN  TY  
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTI 615

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           L++    +   +EA  L  ++    IQ +  T++ +L
Sbjct: 616 LINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALL 652



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 261/557 (46%), Gaps = 85/557 (15%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAY------------------------------K 121
           ++ G + +  TY ++L  L +N  +  AY                              K
Sbjct: 73  RQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKK 132

Query: 122 LLVE--------MGNKGCAPDAVSYTTIVSSIC-KLGQVEEAREL-------AMRFGSGV 165
            ++E        M +KG  PD  +   ++  +  +   ++ ARE+        +R    V
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR--PTV 190

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             YN +++  CK+ K++EA  LL +M   G  PN +TY+ +++ L   G +E +  ++ +
Sbjct: 191 VTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQE 250

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   G   + +++  L++GY   G+  EAS L   M+  G +P +V Y+T+++GLC  G 
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGR 310

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           + +A  +   M   +  P++ +Y+ LI G+ + GN+  A  ++  +   G  P+VV Y  
Sbjct: 311 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNT 370

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM---- 401
           ++  LC+      A  L ++M      P+  TF   ++G C  G +  A +L D+M    
Sbjct: 371 LIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRG 430

Query: 402 --------------------------KQYECL-----PNITTYNELLDGLLRVNRVKEAF 430
                                      Q E L     P++ TYN  +DGL ++  +KEA 
Sbjct: 431 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 490

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ELV ++   G+  + VTY +I+H    AG + +A  +  +ML +G     +T+ ++I++Y
Sbjct: 491 ELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSY 550

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             +G++  AI     +   G  +P++I+Y +L+ G+C    M +A+ +  +M  +GI PN
Sbjct: 551 AVRGRLKLAILHFFEMHEKG-VHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPN 609

Query: 551 FATWNVLVRSLFSNLGH 567
             T+ +L+     NLGH
Sbjct: 610 KYTYTILINE-NCNLGH 625


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 169/541 (31%), Positives = 263/541 (48%), Gaps = 13/541 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           GL + A+    R+RE  + P  +  NHIL  L  E    +   ++  +      PNVFT+
Sbjct: 142 GLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTF 197

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRF 161
           NI++  LCK   +  A  LL  M   GC+PD V+Y +++    K G++EE  +L   MR 
Sbjct: 198 NIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR- 256

Query: 162 GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           G G    V  YNAL+N  CK  ++E A+    EM   G+  NV+T+ST + + C  G V 
Sbjct: 257 GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ +  QM ++G  PN  ++T L+ G    GR  +A  L N M+++G   NVV Y+ L+
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLV 376

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLC  G + EA  V   ME      N   Y+ LI G     N   A  + + M   G  
Sbjct: 377 DGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGME 436

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            +V  Y  ++  LC      +A SL+ KM      PN V +   +       +   A+ L
Sbjct: 437 LDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIAL 496

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L +M      PNI TY  L+DGL +   + EA     ++   G++ N+  Y  ++ G+C+
Sbjct: 497 LQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCK 556

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + +A  LL +M+ +G  LD +    ++  + KQG + +A  L  ++   G    D+ 
Sbjct: 557 NGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG-LQLDLY 615

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
            YT  +WG CN   +QEA   L +M+  GI P+   +N L+      LG++    IL + 
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC-QKLGNMEEAAILQNE 674

Query: 578 M 578
           M
Sbjct: 675 M 675



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/470 (29%), Positives = 232/470 (49%), Gaps = 16/470 (3%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-- 161
           + LL  L     +D A   L  +      P+  +   I+  + +    E + ELA R   
Sbjct: 132 DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLAR----ERSSELAWRLFE 187

Query: 162 ---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                 V  +N +I+ LCKE  + EA  LL  M   G  P+V+TY+++I      G +E 
Sbjct: 188 QLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEE 247

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
              ++G+M   GC P++ ++ +L+  +   GR   A   +  M REG + NVV +ST + 
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
             C NG + EA+ +  QM      PN  TY+ L+DG  KAG L  A  + N M+  G   
Sbjct: 308 AFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL 367

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           NVV YT +V  LC+     +A  +   M       N + + T I G       + A+ LL
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +MK      +++ Y  L+ GL  + ++ EA  L+ ++++CG++ N V Y  I+    +A
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
               EA  LL KM+  G + + +T+  ++   CK G ++ AI   +++   G   P++ +
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG-LEPNVQA 546

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           YT+L+ G+C +G + +A + L +M+++G+  +    NV+  SL    GHL
Sbjct: 547 YTALVDGLCKNGRLDKAVLLLDEMIDKGMSLD----NVVCTSLMD--GHL 590



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 225/478 (47%), Gaps = 42/478 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L ++ ++   + LL +MK  G S     + S+I+ Y + G  E+  K+   +R  G
Sbjct: 200 MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCG 259

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  YN +++      R       ++ MKR+G+  NV T++  + A CKN  V  A 
Sbjct: 260 CRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAM 319

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  +M  KG  P+ V+YT +V   CK G++++A  L            V  Y  L++GL
Sbjct: 320 KLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGL 379

Query: 176 CKEHKI-----------------------------------EEAFWLLCEMVDRGIDPNV 200
           CKE K+                                   E A  LL EM D+G++ +V
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDV 439

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             Y  +I  LC++  ++ +  +L +M   G  PN   +T+++       +  EA  L  +
Sbjct: 440 SLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQK 499

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  GF PN+V Y  L+ GLC  GS+DEA+S   +M +    PNV  Y+AL+DG  K G 
Sbjct: 500 MMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559

Query: 321 LLGASQIWNRMISNGCS-PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           L  A  + + MI  G S  NVV  + M   L Q N+   A +L  KM       +   + 
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNL-QDAFALKAKMINSGLQLDLYGYT 618

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            F+ G C    +  A ++L +M +    P+   YN L++   ++  ++EA  L  E+E
Sbjct: 619 CFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 173/336 (51%), Gaps = 17/336 (5%)

Query: 236 HSFTSLLKGYLLGGRTHEAS---DLWNRMI-----REGFLPNVVAYSTLIHGLCSNGSMD 287
           HS + L +    G   H A+   DL +R       R   LP+VV   TL+  L   G +D
Sbjct: 88  HSRSLLSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPSVV--DTLLSLLADRGLLD 145

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +AV    ++ E   PPN  T + ++   A+      +S++  R+     +PNV  +  M+
Sbjct: 146 DAVLALARVRELRVPPNTRTCNHILLCLARE----RSSELAWRLFEQLPAPNVFTFNIMI 201

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+     +A +L+ +M    C P+ VT+N+ I G   CG ++   KL+ +M+   C 
Sbjct: 202 DFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCR 261

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ TYN L++   +  R++ A+    E+++ G+  N+VT++T +   C+ GMV EA +L
Sbjct: 262 PDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKL 321

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGI 526
             +M ++G K + +T+  ++   CK G++++A+ L +  ++ G   N  +++YT L+ G+
Sbjct: 322 FAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN--VVTYTVLVDGL 379

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           C  G + EA    + M   GI  N   +  L+   F
Sbjct: 380 CKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHF 415



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 156/329 (47%), Gaps = 5/329 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    L  +M  +GV  +   +  +++   + G   +A  +F  +   G++    +Y 
Sbjct: 349 RLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYT 408

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++              + S MK  GME +V  Y  L+  LC   ++D A  LL +M   
Sbjct: 409 TLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDEC 468

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V YT I+ +  K  +  EA  L  +     F   +  Y AL++GLCK   I+EA
Sbjct: 469 GLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEA 528

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                +MVD G++PNV  Y+ ++  LC  G ++ ++ +L +M  +G + +    TSL+ G
Sbjct: 529 ISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDG 588

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +L  G   +A  L  +MI  G   ++  Y+  + G C+   + EA  V  +M EN   P+
Sbjct: 589 HLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPD 648

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMIS 333
              Y+ LI+   K GN+  A+ + N M S
Sbjct: 649 AVVYNCLINKCQKLGNMEEAAILQNEMES 677


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 167/607 (27%), Positives = 284/607 (46%), Gaps = 76/607 (12%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S S  V   ++++Y++ G    A ++   + + GL PT +  N +L  LL  +   ++  
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +   M+  G+ P+V+TY+  ++A CK    D A K+  EM  + CA + V+Y  ++S +C
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 147 KLGQVEEA---RELAMRFG--SGVSVYNALINGLC------------------------- 176
           + G VEEA   +E  + +G       Y AL+NGLC                         
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 177 ----------KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
                     KE K  EAF +L EM+  G+ PN I Y  +I  LC +G +  +  +L +M
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G  P+  ++  L++G+        A +L N M   G LPNV +Y  +I+GLC NG  
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            EA ++  +M      PN   Y+ LI G +K GN+  A +   +M      P++  Y  +
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +K L       +A     ++      P+  T++  I G C  G ++ A +LL QM     
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589

Query: 407 LPNITTYNELLDGLLRVNRVKE-----------------------------------AFE 431
            PN  TY +LL+G  + N  ++                                   AF 
Sbjct: 590 KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFM 649

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++TE+EK G+  ++  Y++++ G+C+   + +A  LL +M  EG +   + +N +I  +C
Sbjct: 650 VLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFC 709

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           + G ++ A  + D I   G   P+ ++YT+L+ G C +G + +AF   ++ML+ GI P+ 
Sbjct: 710 RSGDISRARNVFDSILAKG-LVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDA 768

Query: 552 ATWNVLV 558
             +NVL 
Sbjct: 769 FVYNVLA 775



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 283/577 (49%), Gaps = 8/577 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D  + + ++M+    + +E  +  +I+   R G  E+A      + ++GL P    Y 
Sbjct: 258 DFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYG 317

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L   +R      +   M   G++PN+  Y  L+    K  +   A+ +L EM + 
Sbjct: 318 ALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA 377

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEA 184
           G  P+ + Y  ++  +CK+GQ+  A +L    ++ G       YN L+ G  ++H  + A
Sbjct: 378 GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGA 437

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F LL EM + GI PNV +Y  +I+ LC  G  + +  +L +M   G  PN   +  L+ G
Sbjct: 438 FELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 497

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G    A +   +M +    P++  Y++LI GL + G M+EA     Q+++    P+
Sbjct: 498 HSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPD 557

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TYS LI G+ K GNL  A Q+  +M+++G  PN   YT +++   ++N + +  S+++
Sbjct: 558 EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQ 617

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M      P+   +   I+ L     ++ A  +L ++++   +P++  Y+ L+ GL ++ 
Sbjct: 618 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIA 677

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +++A  L+ E+ K G++  IV YN ++ G CR+G +  A  +   +L +G   + +T+ 
Sbjct: 678 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYT 737

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I   CK G + +A  L   +   G   PD   Y  L  G  ++  +++A    ++M N
Sbjct: 738 ALIDGNCKNGDITDAFDLYKEMLDRG-IAPDAFVYNVLATGCSDAADLEQALFLTEEMFN 796

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G   N + +N LV   F   G L     L  +M ++
Sbjct: 797 RGYA-NVSLFNTLVHG-FCKRGKLQETEKLLHVMMDR 831



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 217/496 (43%), Gaps = 74/496 (14%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M   GV  ++ ++ ++I    ++G   +A K+   + + GL+P    YN ++    
Sbjct: 370 ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHF 429

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            ++       + + M+  G+ PNV++Y I++  LC+N     A  LL EM ++G  P+A 
Sbjct: 430 QQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  ++    K G +  A E   +         +  YN+LI GL    ++EEA     ++
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV 549

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+ P+  TYS +I   C  GN+E +  +L QM   G  PN  ++T LL+GY      
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY 609

Query: 252 HEASDLWNRMI-----------------------------------REGFLPNVVAYSTL 276
            + S +   M+                                   + G +P++  YS+L
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSL 669

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLC    M++AV +  +M +    P +  Y+ALIDGF ++G++  A  +++ +++ G 
Sbjct: 670 ISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGL 729

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP----------------------- 373
            PN V YT ++   C+N     A  L ++M      P                       
Sbjct: 730 VPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALF 789

Query: 374 -----------NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
                      N   FNT + G C  G++    KLL  M   E +PN  T  +++    +
Sbjct: 790 LTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGK 849

Query: 423 VNRVKEAFELVTEIEK 438
             ++ EA  +  E+++
Sbjct: 850 AGKLGEAHRVFAELQQ 865



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 199/422 (47%), Gaps = 6/422 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  E      LL++M  EG+  +  ++  +I  + + G    A +   ++ +  
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKAN 518

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++  L    R       Y+ +++ G+ P+ FTY+ L+   CK   ++ A 
Sbjct: 519 VHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKAD 578

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           +LL +M N G  P+A +YT ++    K    E+    L    GSG      +Y  +I  L
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +E AF +L E+   G+ P++  YS++IS LC + ++E ++G+L +M   G  P I
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGI 698

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + +L+ G+   G    A ++++ ++ +G +PN V Y+ LI G C NG + +A  +  +
Sbjct: 699 VCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKE 758

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+ L  G + A +L  A  +   M + G + NV  +  +V   C+   
Sbjct: 759 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGK 817

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +   L+  M      PN  T    +      G++  A ++  +++Q +   + T    
Sbjct: 818 LQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFS 877

Query: 416 LL 417
           LL
Sbjct: 878 LL 879



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 178/384 (46%), Gaps = 24/384 (6%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFV-----------------------RGCNPN 234
           P+   ++ + +SLC       + G+L QM +                       R  +P+
Sbjct: 113 PSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPS 172

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
                 L+  Y   G    A+ +   M   G  P     + L+  L    +M+    +  
Sbjct: 173 TAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKG 232

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            ME     P+V TYS  I+   KA +   A +++  M    C+ N V Y  M+  LC++ 
Sbjct: 233 FMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 292

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A    E+M      P+  T+   + GLC   R+  A  LLD+M      PNI  Y 
Sbjct: 293 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYG 352

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG ++  +  EAF+++ E+   G+Q N + Y+ ++ G+C+ G +  A +LL +M+  
Sbjct: 353 TLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKV 412

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G + D  T+N ++  + +Q   + A +LL+ +R  G   P++ SY  ++ G+C +G  +E
Sbjct: 413 GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL-PNVYSYGIMINGLCQNGESKE 471

Query: 535 AFIYLQKMLNEGICPNFATWNVLV 558
           A   L++M++EG+ PN   +  L+
Sbjct: 472 AGNLLEEMISEGLKPNAFMYAPLI 495


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 274/543 (50%), Gaps = 19/543 (3%)

Query: 39  SYR---RVGL----AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           SYR   R GL    A+ A+ +F  +      PTV  ++ +  A+    ++ ++  +   M
Sbjct: 153 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 212

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +  G+  N++T +I++   C+  ++  A+  + ++   G  P+ ++++T+++ +C  G+V
Sbjct: 213 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 272

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA EL  R         +   N L+NGLC   K  EA  L+ +MV+ G  PN +TY  +
Sbjct: 273 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 332

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++ +C  G    ++ +L +M  R    +   ++ ++ G    G    A +L+N M  +G 
Sbjct: 333 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 392

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N++ Y+ LI G C+ G  D+   +   M +    PNV T+S LID F K G L  A +
Sbjct: 393 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 452

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   MI  G +P+ + YT ++   C+ N   +A+ +++ M  + C PN  TFN  I G C
Sbjct: 453 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 512

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R+D  ++L  +M     + +  TYN L+ G   + ++  A EL  E+    +  NIV
Sbjct: 513 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 572

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY  +L G+C  G   +A ++  K+     +LD   +NIII+  C   KV++A  L   +
Sbjct: 573 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 632

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G   P + +Y  ++ G+C  G + EA +  +KM  +G  P+  T+N+L+R+      
Sbjct: 633 PLKGV-KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA------ 685

Query: 567 HLG 569
           HLG
Sbjct: 686 HLG 688



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 261/506 (51%), Gaps = 5/506 (0%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D V  L +QM+++G++ +      +IN + R      A     +I + G +P    ++
Sbjct: 201 QYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFS 260

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E R S    +   M   G +P++ T N L+  LC + +   A  L+ +M   
Sbjct: 261 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 320

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+AV+Y  +++ +CK GQ   A EL  +            Y+ +I+GLCK   ++ A
Sbjct: 321 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 380

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EM  +GI  N+ITY+ +I   C+ G  +    +L  M  R  NPN+ +F+ L+  
Sbjct: 381 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 440

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           ++  G+  EA +L   MI  G  P+ + Y++LI G C    +D+A  +   M    C PN
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ LI+G+ KA  +    +++ +M   G   + V Y  +++  C+    + A  L +
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M     PPN VT+   + GLC  G  + A+++ +++++ +   +I  YN ++ G+   +
Sbjct: 561 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 620

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +V +A++L   +   G++  + TYN ++ G+C+ G + EA  L  KM  +G   D  T+N
Sbjct: 621 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYN 680

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGG 510
           I+I A+   G    +++L++ ++  G
Sbjct: 681 ILIRAHLGDGDATKSVKLIEELKRCG 706



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 180/379 (47%), Gaps = 7/379 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G++ +   +  +I  +   G  +   K+   + +  
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D+ + E +      ++  M   G+ P+  TY  L+   CK N +D A 
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 486

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           +++  M +KGC P+  ++  +++  CK  ++++  EL  +       +    YN LI G 
Sbjct: 487 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 546

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  L  EMV R + PN++TY  ++  LCD G  E +L I  ++       +I
Sbjct: 547 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 606

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G  P V  Y+ +I GLC  G + EA  +  +
Sbjct: 607 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN-- 353
           MEE+   P+  TY+ LI      G+   + ++   +   G S +      ++ +L  +  
Sbjct: 667 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDKA 726

Query: 354 NMFHQAHSLIEKMAFENCP 372
           N F + H+  +  +F N P
Sbjct: 727 NYFSKYHNCSKSTSFWNQP 745


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  264 bits (675), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 183/633 (28%), Positives = 292/633 (46%), Gaps = 83/633 (13%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D +Q  +++   + ++ S   +   + S  R  + E   K++ ++ + GL P    YN 
Sbjct: 130 VDAIQ-AIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNT 188

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ A   E   ++ +  +  ++  GME + +T N LL   C+   +  A  LL+ M   G
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C  +  SYT ++  +C+   V EA  L  M    G S     Y  LI GLCKE +I +A 
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM  RG+ P+V TY+ +I   C  G ++ +LGI   M   GCNP+  ++ SL+ G 
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHG- 367

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           L GG+  EA +L N  I  GF P V+ ++ +I+G C    +D+A+ V   M  + C  ++
Sbjct: 368 LCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC-------------- 351
             Y  LI    K   L  A    N + +NG SPNVV YT ++   C              
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487

Query: 352 ---------------------QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
                                Q+   H+A +LI KM  +   P  +T+ T I+G C    
Sbjct: 488 TEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 547

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            D A +L + M+Q    P+   YN L D L +  R +EA+  +    K G+ L  VTY +
Sbjct: 548 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTS 604

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR--IRG 508
           ++ G  +AG    A  L+ KM+ EG K D+ T+++++ A CKQ K+N A+ +LD+  +RG
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRG 664

Query: 509 --------------------------------GGEWNPDIISYTSLLWGICNSGGMQEAF 536
                                                P  I+YT  +   C  G ++EA 
Sbjct: 665 VKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAG 724

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             + +M   G+ P+  T+NV +    +  GH+G
Sbjct: 725 HLIGEMERNGVAPDVVTYNVFI----NGCGHMG 753



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/632 (25%), Positives = 284/632 (44%), Gaps = 90/632 (14%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL  M + G   +E  +  +I          +AL +   + + G  P +  Y  ++  L
Sbjct: 239 WLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGL 298

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E R      +   M R G+ P+V+TYN ++   CK+ R+  A  +   M   GC PD 
Sbjct: 299 CKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDD 358

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLC-------------- 176
            +Y +++  +C  G+ +EA EL     A  F   V  +  +ING C              
Sbjct: 359 WTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSI 417

Query: 177 ---------------------KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                                K+H+++EA   L E+   G+ PNV+ Y++II + C VG 
Sbjct: 418 MISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGK 477

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  +L +       GC PN  +++SL+ G +   + H+A  L  +M  +G  P V+ Y+T
Sbjct: 478 VGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTT 537

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPN------------------------------- 304
           LI G C     D A  +   ME+N   P+                               
Sbjct: 538 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVL 597

Query: 305 -VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
              TY++L+DGF+KAGN   A+ +  +M++ GC  +   Y+ +++ LC+    ++A S++
Sbjct: 598 TKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSIL 657

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M       N V +   I  +   G+ D A  + ++M      P+  TY   +    ++
Sbjct: 658 DQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKI 717

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R++EA  L+ E+E+ G+  ++VTYN  ++G    G +  AF  L +M+    + +  T+
Sbjct: 718 GRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTY 777

Query: 484 NIIIYAYCKQG----------------KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
            +++  + K                  K++   QLL+R+   G  NP  ++Y+S++ G C
Sbjct: 778 WLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHG-LNPTAVTYSSIIAGFC 836

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +  ++EA + L  ML + I PN   + +L++
Sbjct: 837 KATRLEEACVLLDHMLGKDISPNEEIYTMLIK 868



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 261/555 (47%), Gaps = 19/555 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   +  L ++   G+S +  ++ S+I++Y +VG    AL++F      G
Sbjct: 433 LISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEG 492

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    Y+ ++  L+ + +      + + M+ DG+ P V TY  L++  CK +  D A+
Sbjct: 493 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 552

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKE 178
           +L   M   G  PD  +Y  +  ++CK G+ EEA    ++ G  ++   Y +L++G  K 
Sbjct: 553 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKA 612

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              E A  L+ +MV+ G   +  TYS ++ +LC    +  +L IL QM +RG   NI ++
Sbjct: 613 GNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAY 672

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T ++   +  G+   A  ++N MI  G  P+ + Y+  I   C  G ++EA  +  +ME 
Sbjct: 673 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMER 732

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           N   P+V TY+  I+G    G +  A     RMI   C PN   Y  ++K   + ++ + 
Sbjct: 733 NGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANA 792

Query: 359 AH----------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            +                 L+E+M      P  VT+++ I G C   R++ A  LLD M 
Sbjct: 793 HYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHML 852

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
             +  PN   Y  L+     +   ++A   VT + +CG Q ++ +Y+ ++ G+C  G   
Sbjct: 853 GKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYD 912

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A  L   +L      + + + I+     K G V+   QLL  +        D  +Y+ +
Sbjct: 913 KAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAME-NRHCRIDSETYSMV 971

Query: 523 LWGICNSGGMQEAFI 537
              I  + GM E+++
Sbjct: 972 TNNIHEASGMYESYM 986



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 263/591 (44%), Gaps = 26/591 (4%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + LL      G S +   F ++IN Y +    + AL++   +     K  ++ Y  +
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVL 433

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +  L+ ++R        + +  +G+ PNV  Y  ++ A CK  +V  A ++     ++GC
Sbjct: 434 ISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGC 493

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFW 186
            P+A +Y++++  + +  ++ +A  L  +        GV  Y  LI G CK+H+ + AF 
Sbjct: 494 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 553

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L   M   G+ P+   Y+ +  +LC  G  E +   L +   +G      ++TSL+ G+ 
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVDGFS 610

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T  A+ L  +M+ EG   +   YS L+  LC    ++EA+S+  QM       N+ 
Sbjct: 611 KAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            Y+ +I    K G    A  ++N MIS+G  P+ + YT  +   C+     +A  LI +M
Sbjct: 671 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEM 730

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN-- 424
                 P+ VT+N FI G    G +D A   L +M    C PN  TY  LL   L+++  
Sbjct: 731 ERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLA 790

Query: 425 --------------RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
                         ++   ++L+  + K G+    VTY++I+ G C+A  + EA  LL  
Sbjct: 791 NAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDH 850

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           ML +    +   + ++I   C       A   +  +   G + P + SY  L+ G+C+ G
Sbjct: 851 MLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECG-FQPHLESYHYLITGLCDEG 909

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
              +A      +L      N   W +L   L    GH+     L   M N+
Sbjct: 910 DYDKAKALFCDLLEMDYNHNEVAWKILNDGLL-KAGHVDICSQLLSAMENR 959



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 219/505 (43%), Gaps = 44/505 (8%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN-KGCAPDAVSYTTIVSSICKLGQ 150
           +R G      ++  LL+ L +        KL+V M +  G A D       + +I + G 
Sbjct: 82  RRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMREAVDAIQAIRRAG- 140

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                    R       YN  +  L +    E    L  ++V  G+ P+ +TY+T+I + 
Sbjct: 141 -------GKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAY 193

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G++  +      +   G   + ++  +LL GY   G   +A  L   M   G   N 
Sbjct: 194 CKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNE 253

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
            +Y+ LI GLC    + EA+ +   M ++ C PN+ TY+ LI G  K G +  A  + + 
Sbjct: 254 YSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDE 313

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG--- 387
           M   G  P+V  Y  M+   C++     A  +   M    C P+  T+N+ I GLCG   
Sbjct: 314 MPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKP 373

Query: 388 -------------------------------CGRVDWAMKLLDQMKQYECLPNITTYNEL 416
                                            ++D A+++   M   +C  ++  Y  L
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVL 433

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +  L++ +R+KEA + + EI   G+  N+V Y +I+   C+ G V  A ++      EG 
Sbjct: 434 ISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGC 493

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + +A T++ +IY   +  K++ A+ L+ +++  G   P +I+YT+L+ G C       AF
Sbjct: 494 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG-ITPGVITYTTLIQGQCKKHEFDNAF 552

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
              + M   G+ P+   +NVL  +L
Sbjct: 553 RLFEMMEQNGLTPDEQAYNVLTDAL 577


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 259/503 (51%), Gaps = 6/503 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A+    +F ++  +   M+R G+  N++TYNIL+   C+ +++  A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+ +++++  C   ++ +A  L      M +      +  LI+GL  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV RG  PN++TY  +++ LC  G+++ +  +L +M       ++  
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F +++          +A +L+  M  +G  PNVV YS+LI  LCS G   +A  +   M 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PN+ T++ALID F K G  + A ++ + MI     P++  Y  ++   C ++   
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  + E M  ++C P+  T+NT IKG C   RV+   +L  +M     + +  TY  L+
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL        A ++  ++   G+  +I+TY+ +L G+C  G + +A ++   M     K
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           LD   +  +I   CK GKV++   L   +   G   P++++Y +++ G+C+   +QEA+ 
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
            L+KM  +G  P+  T+N L+R+
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRA 509



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 273/513 (53%), Gaps = 5/513 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L ++M+  G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 16  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P++   + +L+      R S    +   M   G  P+  T+  L+  L  +N+   A 
Sbjct: 76  YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  +GC P+ V+Y  +V+ +CK G ++ A  L     A +  + V ++N +I+ L
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++A  L  EM  +GI PNV+TYS++IS LC  G    +  +L  M  +  NPN+
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L+  ++  G+  EA  L + MI+    P++  Y++LI+G C +  +D+A  +   
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P++ TY+ LI GF K+  +   ++++  M   G   + V YT +++ L  +  
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +  PP+ +T++  + GLC  G+++ A+++ D M++ E   +I  Y  
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V + ++L   +   G++ N+VTYNT++ G+C   ++ EA+ LL KM  +G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
              D+ T+N +I A+ + G    + +L+  +R 
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 247/481 (51%), Gaps = 6/481 (1%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN 114
           +++  G+   +  YN +++     ++ S+   +   M + G EP++ T + LL   C   
Sbjct: 35  KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 94

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYN 169
           R+  A  L+ +M   G  PD +++TT++  +    +  EA  L  R         +  Y 
Sbjct: 95  RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            ++NGLCK   I+ AF LL +M    I+ +V+ ++TII SLC   +V+ +L +  +M  +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN+ +++SL+      GR  +AS L + MI +   PN+V ++ LI      G   EA
Sbjct: 215 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 274

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +   M + S  P++ TY++LI+GF     L  A Q++  M+S  C P++  Y  ++K 
Sbjct: 275 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C++        L  +M+      +TVT+ T I+GL   G  D A K+  QM      P+
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 394

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TY+ LLDGL    ++++A E+   ++K  I+L+I  Y T++ G+C+AG V + + L  
Sbjct: 395 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 454

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            + ++G K + +T+N +I   C +  +  A  LL +++  G   PD  +Y +L+      
Sbjct: 455 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLRD 513

Query: 530 G 530
           G
Sbjct: 514 G 514



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  R+ + G +P +  Y  +++ L 
Sbjct: 102 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 161

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   +E +V  +N ++ +LCK   VD A  L  EM  KG  P+ V
Sbjct: 162 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 221

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A +L       +    +  +NALI+   KE K  EA  L  +M
Sbjct: 222 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TY+++I+  C    ++ +  +   M  + C P++ ++ +L+KG+    R 
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            + ++L+  M   G + + V Y+TLI GL  +G  D A  V  QM  +  PP++ TYS L
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G L  A ++++ M  +    ++  YT M++ +C+         L   ++ +  
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+NT I GLC    +  A  LL +MK+   LP+  TYN L+   LR      + E
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 522 LIREMRSC 529



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 215/397 (54%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  N+ TY+ +I+  C    +  +L +LG+M 
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  +A  L ++M+  G+ P+ + ++TLIHGL  +    
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M +  C PN+ TY  +++G  K G++  A  + N+M +     +VV +  ++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D  ++  +  EA +L  ++ K  I  +I TYN++++G C    + +A Q+
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D  T+N +I  +CK  +V +  +L   +   G    D ++YT+L+ G+ 
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLF 371

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + G    A    ++M+++G+ P+  T+++L+  L +N
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   + G  + A  +  ++    ++  V I+N I+D+L           ++  M+  G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LC   R   A +LL +M  K   P+ V++  ++ +  K G+  EA 
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L            +  YN+LING C   ++++A  +   MV +   P++ TY+T+I   
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    VE    +  +M  RG   +  ++T+L++G    G    A  ++ +M+ +G  P++
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + YS L+ GLC+NG +++A+ V   M+++    ++  Y+ +I+G  KAG +     ++  
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G  PNVV Y  M+  LC   +  +A++L++KM  +   P++ T+NT I+     G 
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 516 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 554



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 186/367 (50%), Gaps = 1/367 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P++  ++ ++S++  +   +  + +  +M   G + N++++  L+  +    +   A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             +M++ G+ P++V  S+L++G C    + +AV++  QM E    P+  T++ LI G   
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
                 A  + +RM+  GC PN+V Y  +V  LC+      A +L+ KM       + V 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           FNT I  LC    VD A+ L  +M+     PN+ TY+ L+  L    R  +A +L++++ 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +  I  N+VT+N ++    + G  VEA +L   M+      D  T+N +I  +C   +++
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A Q+ + +     + PD+ +Y +L+ G C S  +++     ++M + G+  +  T+  L
Sbjct: 308 KAKQMFEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 558 VRSLFSN 564
           ++ LF +
Sbjct: 367 IQGLFHD 373



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 154/299 (51%), Gaps = 3/299 (1%)

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M++   LP++  ++ L+  +      D  +S+  +M+      N+ TY+ LI+ F +   
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  +  +M+  G  P++V  + ++   C       A +L+++M      P+T+TF T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GL    +   A+ L+D+M Q  C PN+ TY  +++GL +   +  AF L+ ++E   
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I+ ++V +NTI+  +C+   V +A  L  +M  +G + + +T++ +I   C  G+ ++A 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 501 QLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           QLL D I    + NP+++++ +L+      G   EA      M+   I P+  T+N L+
Sbjct: 241 QLLSDMIE--KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    + D  Q + +QM  +GV      +  +++     G  E+AL++F  +++  
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  + IY  +++ +    +      ++ ++   G++PNV TYN ++  LC    +  AY
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            LL +M   G  PD+ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 546 HDGRLDKSF 554


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 155/542 (28%), Positives = 272/542 (50%), Gaps = 6/542 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           ++ VF  +I ++ +     +A + F  +R  G   ++   N ++ +L+      +   IY
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             + R G+  NV+T NI++ ALCK+ +++     L E+  KG  PD V+Y T++S+    
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 149 GQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G +EEA EL     +  F  GV  YN +INGLCK  K E A  +  EM+  G+ P+  TY
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            +++   C  G+   +  I   M  R   P++  F+S++  +   G   +A   +N +  
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G +P+ V Y+ LI G C  G + EA+++  +M +  C  +V TY+ ++ G  K   L  
Sbjct: 394 AGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++N M   G  P+    T ++   C+      A  L +KM  +    + VT+NT + 
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G    G +D A ++   M   E LP   +++ L++ L     + EAF +  E+    I+ 
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            ++  N+++ G CR+G   +    L KM+ EG   D I++N +IY + K+  ++ A  L+
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLV 633

Query: 504 DRI-RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++    G   PD+ +Y S+L G C    M+EA   L+KM+  G+ P+ +T+  L+    
Sbjct: 634 KKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFV 693

Query: 563 SN 564
           S 
Sbjct: 694 SQ 695



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 262/486 (53%), Gaps = 10/486 (2%)

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +R  ++N + S     G   +VF  ++L++   +  ++  AY+    + +KG      + 
Sbjct: 136 SRVEIVNSLVSTYSNCGSNDSVF--DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDAC 193

Query: 139 TTIVSSICKLGQVEEA----RELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMV 192
             ++ S+ ++G VE A    +E++ R G GV+VY  N ++N LCK+ K+E+    L E+ 
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEIS-RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQ 252

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           ++G+ P+++TY+T+IS+    G +E +  ++  M  +G +P ++++ +++ G    G+  
Sbjct: 253 EKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYE 312

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A +++  M+R G  P+   Y +L+   C  G   E  ++   M      P++  +S+++
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM 372

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             F ++GNL  A   +N +   G  P+ V YT +++  C+  M  +A +L  +M  + C 
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCA 432

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            + VT+NT + GLC    +  A KL ++M +    P+  T   L+DG  ++  ++ A EL
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++++  I+L++VTYNT+L G  + G +  A ++   M+ +      I+F+I++ A C 
Sbjct: 493 FKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCS 552

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G ++ A ++ D +       P ++   S++ G C SG   +  I+L+KM++EG  P+  
Sbjct: 553 KGHLSEAFRVWDEMISKS-IKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCI 611

Query: 553 TWNVLV 558
           ++N L+
Sbjct: 612 SYNTLI 617



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 264/537 (49%), Gaps = 43/537 (8%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           ++ +G + S     ++I S  R+G  E A +++  I   G+   V   N +++AL  + +
Sbjct: 181 LRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGK 240

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
              +    S ++  G+ P++ TYN L+ A      ++ A++L+  M +KG +P   +Y T
Sbjct: 241 MEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNT 300

Query: 141 IVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++ +CK G+ E A+E+ A    SG+S     Y +L+   CK+    E   +  +M  R 
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+++ +S+++S     GN++ +L     +   G  P+   +T L++GY   G   EA 
Sbjct: 361 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAM 420

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSN-------------------------------- 283
           +L N M+++G   +VV Y+T++HGLC                                  
Sbjct: 421 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGH 480

Query: 284 ---GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              G++  A+ +  +M+E     +V TY+ L+DGF K G++  A +IW  M+S    P  
Sbjct: 481 CKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 540

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           ++++ +V  LC      +A  + ++M  ++  P  +  N+ IKG C  G        L++
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE--KCGIQLNIVTYNTILHGVCRA 458
           M     +P+  +YN L+ G ++   + +AF LV ++E  + G+  ++ TYN+ILHG CR 
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRE 660

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
             + EA  +L KM+  G   D  T+  +I  +  Q  +  A +  D +   G ++PD
Sbjct: 661 NQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG-FSPD 716



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 238/489 (48%), Gaps = 13/489 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  +++ V   L +++ +GV      + ++I++Y   GL E+A ++ + +   G
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +++ L    ++     +++ M R G+ P+  TY  LL   CK        
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE 350

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
            +  +M ++   PD V +++++S   + G +++A    M F S           +Y  LI
Sbjct: 351 NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA---LMYFNSVKEAGLIPDNVIYTILI 407

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G C++  I EA  L  EM+ +G   +V+TY+TI+  LC    +  +  +  +M  RG  
Sbjct: 408 QGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLF 467

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+ ++ T L+ G+   G    A +L+ +M  +    +VV Y+TL+ G    G +D A  +
Sbjct: 468 PDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEI 527

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P   ++S L++     G+L  A ++W+ MIS    P V+    M+K  C+
Sbjct: 528 WADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCR 587

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNI 410
           +         +EKM  E   P+ +++NT I G      +  A  L+ +M  KQ   +P++
Sbjct: 588 SGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDV 647

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN +L G  R N++KEA  ++ ++ + G+  +  TY ++++G      + EAF+   +
Sbjct: 648 FTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDE 707

Query: 471 MLIEGTKLD 479
           ML  G   D
Sbjct: 708 MLQRGFSPD 716



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 207/420 (49%), Gaps = 2/420 (0%)

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
           GS  SV++ LI    +  K+ EA+     +  +G   ++   + +I SL  +G VE +  
Sbjct: 152 GSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWR 211

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  ++   G   N+++   ++      G+  +     + +  +G  P++V Y+TLI    
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           S G M+EA  + + M      P V TY+ +I+G  K G    A +++  M+ +G SP+  
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++   C+     +  ++   M   +  P+ V F++ +      G +D A+   + +
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           K+   +P+   Y  L+ G  R   + EA  L  E+ + G  +++VTYNTILHG+C+  M+
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA +L  +M   G   D+ T  I+I  +CK G + NA++L  +++       D+++Y +
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMK-EKRIKLDVVTYNT 510

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           LL G    G +  A      M+++ I P   ++++LV +L S  GHL   + + D M +K
Sbjct: 511 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSK-GHLSEAFRVWDEMISK 569



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 158/363 (43%), Gaps = 25/363 (6%)

Query: 223 LGQMFVR--GCN-PNIH----SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           LGQ FV   G N PN      S ++++   +  GR  +A     RMIR   +  V   ++
Sbjct: 84  LGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNS 143

Query: 276 LIHGLCSNGSMD-----------------EAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           L+    + GS D                 EA      +       ++   +ALI    + 
Sbjct: 144 LVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRI 203

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A +I+  +  +G   NV     MV  LC++    +  + + ++  +   P+ VT+
Sbjct: 204 GWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTY 263

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           NT I      G ++ A +L+  M      P + TYN +++GL +  + + A E+  E+ +
Sbjct: 264 NTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 323

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  +  TY ++L   C+ G  VE   +   M       D + F+ ++  + + G ++ 
Sbjct: 324 SGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 383

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+   + ++  G   PD + YT L+ G C  G + EA     +ML +G   +  T+N ++
Sbjct: 384 ALMYFNSVKEAG-LIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTIL 442

Query: 559 RSL 561
             L
Sbjct: 443 HGL 445


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 261/512 (50%), Gaps = 8/512 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L +     G + +L+ M   G+ C    F  V+ SY R G    AL++   +++ G
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAG 265

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P++ I N  +  L+   +          M+  G++P++ TYN L+K  C  NR++ A 
Sbjct: 266 VEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 325

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV----SVYNALING 174
           +L+  + +KGC PD VSY T++  +CK  ++EE + L   M + S +      YN LI+ 
Sbjct: 326 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHM 385

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K    ++A   L E  D+G   + + YS I+ S C  G ++ +  ++  M+ RGCNP+
Sbjct: 386 LSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPD 445

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+++ G+   GR  EA  +  +M + G  PN V+Y+ L++GLC +G   EA  +  
Sbjct: 446 VVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 505

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             EE+   PN  TY A++ G  + G L  A  +   M+  G  P  V    +++ LCQN 
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A   +E+   + C  N V F T I G C  G ++ A+ +LD M      P+  TY 
Sbjct: 566 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYT 625

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L D L +  R+ EA EL+ ++   G+    VTY +++H   + G V +   LL KML  
Sbjct: 626 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKML-- 683

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
             +     +N +I   C  G +  A +LL ++
Sbjct: 684 KRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKV 715



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 177/424 (41%), Gaps = 92/424 (21%)

Query: 9   CEIDGVQY------LLQQMKVEGVSC-------------SEGVFISVINSYRRVGLAEQA 49
           C  D V Y      L ++ K+E V C              +  + ++I+   + G A+ A
Sbjct: 336 CPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDA 395

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L      ++ G       Y+ I+ +   + R      +  +M   G  P+V TY  ++  
Sbjct: 396 LAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDG 455

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSG 164
            C+  R+D A K+L +M   GC P+ VSYT +++ +C  G+  EARE+        +   
Sbjct: 456 FCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 515

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP-------------------------- 198
              Y A+++GL +E K+ EA  L  EMV++G  P                          
Sbjct: 516 AITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLE 575

Query: 199 ---------NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
                    NV+ ++T+I   C +G++E +L +L  M++ G +P+  ++T+L       G
Sbjct: 576 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKG 635

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIH------------------------------- 278
           R  EA++L  +M+ +G  P  V Y ++IH                               
Sbjct: 636 RLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQV 695

Query: 279 --GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
              LC  G+++EA  +  ++   +   +  T   L++ + K G  + A ++  RM     
Sbjct: 696 IEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNL 755

Query: 337 SPNV 340
           +P++
Sbjct: 756 TPDL 759



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 40/319 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID  + +LQQM   G   +   + +++N     G + +A +M     E    P    Y 
Sbjct: 461 RIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG 520

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E + S    +   M   G  P     N+L+++LC+N +V  A K L E  NK
Sbjct: 521 AVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNK 580

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE------LAMRFGSGVSVYNALINGLCKEHKIEE 183
           GCA + V++TT++   C++G +E A        L+ +    V+ Y AL + L K+ +++E
Sbjct: 581 GCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVT-YTALFDALGKKGRLDE 639

Query: 184 AFWLLCEMVDRGIDPNVITYSTII---------------------------------SSL 210
           A  L+ +M+ +G+DP  +TY ++I                                   L
Sbjct: 640 AAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKL 699

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           CD GN+E +  +LG++       + ++   L++ YL  G    A  +  RM R    P++
Sbjct: 700 CDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDL 759

Query: 271 VAYSTLIHGLCSNGSMDEA 289
                +   L  +G + EA
Sbjct: 760 KLCEKVSKKLVLDGKLVEA 778


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 259/503 (51%), Gaps = 6/503 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A+    +F ++  +   M+R  +   ++TYNIL+   C+ +++  A  L
Sbjct: 45  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+ +++++  C   ++ +A  L      M +      +  LI+GL  
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV RG  PN++TY  +++ LC  G+ + +L +L +M       ++  
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F +++          +A +L+  M  +G  PNVV YS+LI  LCS G   +A  +   M 
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PN+ T++ALID F K G  + A ++++ MI     P++  Y  +V   C ++   
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  + E M  ++C P+ VT+NT IKG C   RV+   +L  +M     + +  TY  L+
Sbjct: 345 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 404

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL        A ++  ++   G+  +I+TY+ +L G+C  G + +A ++   M     K
Sbjct: 405 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 464

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           LD   +  +I   CK GKV++   L   +   G   P++++Y +++ G+C+   +QEA+ 
Sbjct: 465 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYA 523

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
            L+KM  +G  PN  T+N L+R+
Sbjct: 524 LLKKMKEDGPLPNSGTYNTLIRA 546



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 256/477 (53%), Gaps = 5/477 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R      AL +  ++ + G +P++   + +L+      R S    +   M   G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+  T+  L+  L  +N+   A  L+  M  +GC P+ V+Y  +V+ +CK G  + A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L     A +  + V ++N +I+ LCK   +++A  L  EM  +GI PNV+TYS++IS L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G    +  +L  M  +  NPN+ +F +L+  ++  G+  EA  L++ MI+    P++
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 327

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y++L++G C +  +D+A  +   M    C P+V TY+ LI GF K+  +   ++++  
Sbjct: 328 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 387

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G   + V YT +++ L  +     A  + ++M  +  PP+ +T++  + GLC  G+
Sbjct: 388 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 447

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+++ D M++ E   +I  Y  +++G+ +  +V + ++L   +   G++ N+VTYNT
Sbjct: 448 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 507

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           ++ G+C   ++ EA+ LL KM  +G   ++ T+N +I A+ + G    + +L+  +R
Sbjct: 508 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 564



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  R+ + G +P +  Y  +++ L 
Sbjct: 139 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 198

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   +E +V  +N ++ +LCK   VD A  L  EM  KG  P+ V
Sbjct: 199 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 258

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A +L       +    +  +NALI+   KE K  EA  L  +M
Sbjct: 259 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 318

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TY+++++  C    ++ +  +   M  + C P++ ++ +L+KG+    R 
Sbjct: 319 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 378

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            + ++L+  M   G + + V Y+TLI GL  +G  D A  V  QM  +  PP++ TYS L
Sbjct: 379 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 438

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G L  A ++++ M  +    ++  YT M++ +C+         L   ++ +  
Sbjct: 439 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 498

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+NT I GLC    +  A  LL +MK+   LPN  TYN L+   LR      + E
Sbjct: 499 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 558

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 559 LIREMRSC 566



 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 213/397 (53%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M    I   + TY+ +I+  C    +  +L +LG+M 
Sbjct: 50  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 109

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  +A  L ++M+  G+ P+ + ++TLIHGL  +    
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M +  C PN+ TY  +++G  K G+   A  + N+M +     +VV +  ++
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 229

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 289

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D  ++  +  EA +L  ++ K  I  +I TYN++++G C    + +A Q+
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D +T+N +I  +CK  +V +  +L   +   G    D ++YT+L+ G+ 
Sbjct: 350 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLF 408

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + G    A    ++M+++G+ P+  T+++L+  L +N
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 445



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   + G  + AL +  ++    ++  V I+N I+D+L           ++  M+  G
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LC   R   A +LL +M  K   P+ V++  ++ +  K G+  EA 
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L            +  YN+L+NG C   ++++A  +   MV +   P+V+TY+T+I   
Sbjct: 313 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    VE    +  +M  RG   +  ++T+L++G    G    A  ++ +M+ +G  P++
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 432

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + YS L+ GLC+NG +++A+ V   M+++    ++  Y+ +I+G  KAG +     ++  
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G  PNVV Y  M+  LC   +  +A++L++KM  +   PN+ T+NT I+     G 
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 552

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 553 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 591



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 182/338 (53%), Gaps = 5/338 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++M+ +G+  +   + S+I+     G    A ++   + E  
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 287

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  +N ++DA + E +F     +Y +M +  ++P++FTYN L+   C ++R+D A 
Sbjct: 288 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 347

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
           ++   M +K C PD V+Y T++   CK  +VE+     RE++ R   G +V Y  LI GL
Sbjct: 348 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             +   + A  +  +MV  G+ P+++TYS ++  LC+ G +E +L +   M       +I
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           + +T++++G    G+  +  DL+  +  +G  PNVV Y+T+I GLCS   + EA ++  +
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           M+E+   PN  TY+ LI    + G+   ++++   M S
Sbjct: 528 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 565



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 181/371 (48%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ + D    LL +M+   +     +F ++I+S  +    + AL +F  +   G
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L +  R+S  + + S+M    + PN+ T+N L+ A  K  +   A 
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  +M  +   PD  +Y ++V+  C   ++++A+++     S      V  YN LI G 
Sbjct: 313 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+   L  EM  RG+  + +TY+T+I  L   G+ + +  +  QM   G  P+I
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 432

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++ LL G    G+  +A ++++ M +     ++  Y+T+I G+C  G +D+   +   
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      PNV TY+ +I G      L  A  +  +M  +G  PN   Y  +++   ++  
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 552

Query: 356 FHQAHSLIEKM 366
              +  LI +M
Sbjct: 553 KAASAELIREM 563



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    + D  Q + +QM  +GV      +  +++     G  E+AL++F  +++  
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  + IY  +++ +    +      ++ ++   G++PNV TYN ++  LC    +  AY
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            LL +M   G  P++ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 582

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 583 HDGRLDKSF 591


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 281/550 (51%), Gaps = 7/550 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++Q M+      +   + ++I ++  V  ++  L +F +++E G +PTV ++  ++    
Sbjct: 155 VVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   MK   ++ ++  YN+ + +  K  +VD A+K   E+   G  PD V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++  +CK  +++EA E+         V     YN +I G     K +EA+ LL   
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G  P+VI Y+ I++ L  +G V+ +L +  +M  +   PN+ ++  L+      G+ 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L + M + G  PNV   + ++  LC +  +DEA ++  QM+   C P+  T+ +L
Sbjct: 394 DCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSL 453

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A +I+ +M+ + C  N + YT ++K    +      H + + M  +NC
Sbjct: 454 IDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNC 513

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    NT++  +   G  +    + +++K    +P+  +Y+ L+ GL++     E +E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +++ G  L+   YN ++ G C+ G V +A+QLL +M  +G +   +T+  +I    
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  +++ A  L +  +       +++ Y+SL+ G    G + EA++ L++++ +G+ PN 
Sbjct: 634 KIDRLDEAYMLFEEAK-SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNV 692

Query: 552 ATWNVLVRSL 561
            TWN L+ +L
Sbjct: 693 YTWNSLLDAL 702



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 291/586 (49%), Gaps = 9/586 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    ++  +D    LL +MK   +     ++   I+S+ +VG  + A K F+ I   G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y  ++  L   NR      ++ +++++   P  + YN ++       + D AY
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            LL     KG  P  ++Y  I++ + K+G+V+EA     E+       +S YN LI+ LC
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLC 388

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +  K++ AF L   M   G+ PNV T + ++  LC    ++ +  I  QM  + C P+  
Sbjct: 389 RAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEI 448

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F SL+ G    GR  +A  ++ +M+      N + Y++LI    ++G  ++   +   M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
              +C P++   +  +D   KAG       ++  + S    P+  +Y+ ++  L +    
Sbjct: 509 VNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFA 568

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           ++ + L   M  + C  +T  +N  I G C CG+V+ A +LL++MK     P + TY  +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +   I+LN+V Y++++ G  + G + EA+ +L +++ +G 
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+N ++ A  K  ++N A+     ++   +  P+ ++Y  L+ G+C      +AF
Sbjct: 689 TPNVYTWNSLLDALVKAEEINEALVCFQSMK-ELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFS--NLGHLGPVYILDDIMAN 580
           ++ Q+M  +G+ P+  ++  ++  L    N+   G ++  D   AN
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF--DRFKAN 791



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 152/622 (24%), Positives = 283/622 (45%), Gaps = 84/622 (13%)

Query: 36  VINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           VI   RR+    +A++ F +  R   L    + YN +L  +     F  ++ I   M   
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ---- 150
           G  P+V T   ++ +  K N++   + ++  M      P   +YTT++ +   +      
Sbjct: 128 GFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187

Query: 151 ---VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
               ++ +EL   +   V ++  LI G  KE +++ A  LL EM    +D +++ Y+  I
Sbjct: 188 LTLFQQMQELG--YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS--------------------------- 240
            S   VG V+ +     ++   G  P+  ++TS                           
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305

Query: 241 --------LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
                   ++ GY   G+  EA  L  R   +G +P+V+AY+ ++  L   G +DEA+ V
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRV 365

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M++++  PN++TY+ LID   +AG L  A ++ + M   G  PNV     MV  LC+
Sbjct: 366 FEEMKKDAA-PNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +    +A ++ E+M ++ C P+ +TF + I GL   GRVD A K+ ++M   +C  N   
Sbjct: 425 SQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIV 484

Query: 413 YNELLDGLLRVNRVKEAFELVTEI--EKCGIQLNIV------------------------ 446
           Y  L+       R ++  ++  ++  + C   L ++                        
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544

Query: 447 ---------TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
                    +Y+ ++HG+ +AG   E ++L   M  +G  LD   +NI+I  +CK GKVN
Sbjct: 545 SRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A QLL+ ++  G + P +++Y S++ G+     + EA++  ++  ++ I  N   ++ L
Sbjct: 605 KAYQLLEEMKTKG-FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663

Query: 558 VRSLFSNLGHLGPVY-ILDDIM 578
           +   F  +G +   Y IL+++M
Sbjct: 664 IDG-FGKVGRIDEAYLILEELM 684



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 168/335 (50%), Gaps = 9/335 (2%)

Query: 34  ISVINSYR----RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           + ++N+Y     + G  E+   MF  I+     P  + Y+ ++  L+     +    ++ 
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           +MK  G   +   YNI++   CK  +V+ AY+LL EM  KG  P  V+Y +++  + K+ 
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

Query: 150 QVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +++EA  L     + R    V +Y++LI+G  K  +I+EA+ +L E++ +G+ PNV T++
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWN 696

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++ +L     +  +L     M    C PN  ++  L+ G     + ++A   W  M ++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+ ++Y+T+I GL   G++ EA ++  + + N   P+   Y+A+I+G +     + A
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
             ++      G   +      ++  L +N+   QA
Sbjct: 817 FSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 9/289 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   MK +G       +  VI+ + + G   +A ++   ++  G +PTV  Y  ++D L 
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R      ++   K   +E NV  Y+ L+    K  R+D AY +L E+  KG  P+  
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVY 693

Query: 137 SYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           ++ +++ ++ K  ++ EA       +EL  +       Y  LINGLCK  K  +AF    
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKEL--KCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  +G+ P+ I+Y+T+IS L   GN+  +  +  +    G  P+   + ++++G   G 
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           R  +A  L+    R G   +      L+  L  N  +++A  V   + E
Sbjct: 812 RAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 5/215 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++ K + +  +  ++ S+I+ + +VG  ++A  +   + + G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +N +LDAL+     +     + +MK     PN  TY IL+  LCK  + + A+
Sbjct: 688 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
               EM  +G  P  +SYTT++S + K G + EA  L  RF +   V     YNA+I GL
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
              ++  +AF L  E   RG+  +  T   ++ +L
Sbjct: 808 SNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  264 bits (675), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 169/560 (30%), Positives = 285/560 (50%), Gaps = 12/560 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +DGV  ++  M+  G+        +++N+  R+    Q L++F  +   G+KP   IY  
Sbjct: 172 MDGV-LVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTV 230

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L     F+    I +  + +G   ++ TYN+ +  LCK+ RV  A ++   +G KG
Sbjct: 231 VVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKG 290

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
              D V+Y T+V  +C++ + E   E+      + +    +  + LI GL K   IE AF
Sbjct: 291 LKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAF 350

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL ++   G+ PN+  Y+++I+SLC  G +E +  +   M  RG NPN  ++T L+ G+
Sbjct: 351 ELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGF 410

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               +   A   +N+MI  G    V +Y+++I+  C  G M  A  +  +M +    P V
Sbjct: 411 GRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTV 470

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY++LI G+ K G +  A ++++ M   G +PN V +T ++  LCQ N   +A  L ++
Sbjct: 471 ATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDE 530

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      PN VT+N  I+G C  G    A +LLD+M +    P+  TY  L+ GL    R
Sbjct: 531 MVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGR 590

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           V EA E + ++     +L+ + Y  +L G C+ G + EA     +M+  G ++D +++ +
Sbjct: 591 VSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAV 650

Query: 486 IIYAYCKQGKVNNAI--QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           +I     Q   N+ I  +LL  + G G   PD + YT L+ G   SG +++AF +   M+
Sbjct: 651 LISGALNQ---NDRILFELLREMHGKG-MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMI 706

Query: 544 NEGICPNFATWNVLVRSLFS 563
            EG  PN  T+  LV  LF 
Sbjct: 707 GEGYVPNSVTYTALVNGLFK 726



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/487 (30%), Positives = 253/487 (51%), Gaps = 7/487 (1%)

Query: 78  ENRFSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +N+  M   +  N+ RD G+ P V T + LL AL +  +     +L   + N G  PD  
Sbjct: 167 QNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCY 226

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNALINGLCKEHKIEEAFWLLCEM 191
            YT +V  +C+L    +A+E+  +  G+G S+    YN  INGLCK  ++ EA  +   +
Sbjct: 227 IYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSL 286

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            ++G+  +++TY T++  LC +   E  + ++ +M   G  P+  + + L++G +  G  
Sbjct: 287 GEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSI 346

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L N++ + G +PN+  Y+++I+ LC  G ++EA  +   M E    PN  TY+ L
Sbjct: 347 EGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTIL 406

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDGF +   L  A   +N+MI  G S  V +Y  M+   C+      A  L ++M  +  
Sbjct: 407 IDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGL 466

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P   T+ + I G C  G V  A KL  +M      PN  T+  L+ GL ++N++ EA +
Sbjct: 467 KPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASK 526

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+ +  I  N VTYN ++ G CR G    AF+LL +M+ +G   D  T+  +I   C
Sbjct: 527 LFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLC 586

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             G+V+ A + ++ +    +   D + YT+LL G C  G ++EA +  Q+M+  G+  + 
Sbjct: 587 STGRVSEAKEFINDLHHKHQ-RLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDL 645

Query: 552 ATWNVLV 558
            ++ VL+
Sbjct: 646 VSYAVLI 652



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 263/528 (49%), Gaps = 8/528 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  +++  + L   M   G++ ++  +  +I+ + R    + A   F ++ E G
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +  TV  YN +++      +  M   ++  M   G++P V TY  L+   CK+  V  A+
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           KL  EM  KG AP+ V++T ++  +C++ ++ EA +L      ++       YN LI G 
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E     AF LL EM+ +G+ P+  TY  +I+ LC  G V  +   +  +  +    + 
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+LL+G+   GR  EA      M+  G   ++V+Y+ LI G   N +      +  +
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISG-ALNQNDRILFELLRE 669

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+   Y+ LIDGF K+GNL  A + W  MI  G  PN V YT +V  L +   
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            ++A  L ++M      PN +T+  F+  L   G ++ A++L + M Q     N  TYN 
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNI 788

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  ++ + +EA +L+  +   G+  + +TY+T ++  C+ G V  A  +   ML  G
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG 848

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
            K D + FN +I+A C  G+++ A+QL + +   G   P   +Y SL+
Sbjct: 849 LKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRG-LKPTQSTYHSLM 895



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 275/566 (48%), Gaps = 8/566 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE L +   I+G   LL ++   GV  +  V+ S+INS  + G  E+A  +F  + E G
Sbjct: 336 LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERG 395

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++D      +  +    ++ M   G+   V++YN ++   CK  ++  A 
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAE 455

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
            L  EM +KG  P   +YT+++S  CK G V +A +L     G G++     + ALI GL
Sbjct: 456 LLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGL 515

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+ +K+ EA  L  EMV+  I PN +TY+ +I   C  GN   +  +L +M  +G +P+ 
Sbjct: 516 CQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDT 575

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  L+ G    GR  EA +  N +  +    + + Y+ L+ G C  G + EA+    +
Sbjct: 576 YTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQE 635

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M       ++ +Y+ LI G     + +   ++   M   G  P+ V YT ++    ++  
Sbjct: 636 MVGRGLQMDLVSYAVLISGALNQNDRI-LFELLREMHGKGMQPDNVIYTILIDGFIKSGN 694

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A      M  E   PN+VT+   + GL   G V+ A  L  +M   E +PN  TY  
Sbjct: 695 LKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGC 754

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            LD L +   ++ A +L   + + G   N VTYN ++ G C+ G   EA +LL  M+  G
Sbjct: 755 FLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIG 813

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D IT++  IY YCK+G V+ A+ + + +   G   PD + +  L+   C +G +  A
Sbjct: 814 MVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG-LKPDRVVFNFLIHACCLNGELDRA 872

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
                 M+  G+ P  +T++ L+  L
Sbjct: 873 LQLRNDMMLRGLKPTQSTYHSLMVQL 898



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 264/550 (48%), Gaps = 10/550 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ +M   G   SE     +I    ++G  E A ++  ++ + G+ P + +YN ++++L 
Sbjct: 317 MMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLC 376

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      ++S M   G+ PN  TY IL+    +  ++D A+    +M   G +    
Sbjct: 377 KTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVY 436

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY ++++  CK G+++ A    +E+  +     V+ Y +LI+G CK+  + +AF L  EM
Sbjct: 437 SYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +GI PN +T++ +I  LC +  +  +  +  +M      PN  ++  L++G+   G T
Sbjct: 497 TGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNT 556

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L + MI++G  P+   Y  LI GLCS G + EA      +       +   Y+AL
Sbjct: 557 TRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTAL 616

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK-VLCQNNMFHQAHSLIEKMAFEN 370
           + GF K G +  A      M+  G   ++V+Y  ++   L QN+       L+ +M  + 
Sbjct: 617 LQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI--LFELLREMHGKG 674

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ V +   I G    G +  A +    M     +PN  TY  L++GL +   V EA 
Sbjct: 675 MQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAK 734

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L   +       N +TY   L  + + G +  A QL   ML +G+  + +T+NI+I  Y
Sbjct: 735 LLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGY 793

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C+ GK   A +LLD + G G   PD I+Y++ ++  C  G +  A    + ML  G+ P+
Sbjct: 794 CQIGKFQEAAKLLDVMIGIG-MVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPD 852

Query: 551 FATWNVLVRS 560
              +N L+ +
Sbjct: 853 RVVFNFLIHA 862



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 210/453 (46%), Gaps = 40/453 (8%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           + L ++M  +G+  +   + S+I+ Y + GL  +A K+++ +   G+ P    +  ++  
Sbjct: 455 ELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICG 514

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L   N+ +  + ++  M    + PN  TYN+L++  C+      A++LL EM  KG +PD
Sbjct: 515 LCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPD 574

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLC 189
             +Y  +++ +C  G+V EA+E                Y AL+ G CKE +I+EA     
Sbjct: 575 TYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQ 634

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EMV RG+  ++++Y+ +IS   +  N      +L +M  +G  P+   +T L+ G++  G
Sbjct: 635 EMVGRGLQMDLVSYAVLISGALN-QNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSG 693

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN----- 304
              +A + W  MI EG++PN V Y+ L++GL   G ++EA  +  +M      PN     
Sbjct: 694 NLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYG 753

Query: 305 -----------------------------VTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
                                          TY+ LI G+ + G    A+++ + MI  G
Sbjct: 754 CFLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIG 813

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+ + Y+  +   C+      A  + E M      P+ V FN  I   C  G +D A+
Sbjct: 814 MVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRAL 873

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +L + M      P  +TY+ L+  L +  R+ +
Sbjct: 874 QLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 160/321 (49%), Gaps = 1/321 (0%)

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F  L++ Y+   R  +   + N M   G LP V   S L++ L       + + +   + 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P+   Y+ ++    +  +   A +I N+   NGCS ++V Y   +  LC++    
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  +   +  +    + VT+ T + GLC     +  M+++D+M +   +P+    + L+
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +GL+++  ++ AFEL+ ++ K G+  N+  YN++++ +C+ G + EA  L   M   G  
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T+ I+I  + ++ K++ A    +++   G  +  + SY S++   C  G M+ A +
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG-ISATVYSYNSMINCQCKFGKMKMAEL 456

Query: 538 YLQKMLNEGICPNFATWNVLV 558
             ++M+++G+ P  AT+  L+
Sbjct: 457 LFKEMVDKGLKPTVATYTSLI 477


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/525 (29%), Positives = 273/525 (52%), Gaps = 38/525 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REF 59
           +IE      +   ++ LL QMK E     E  FI +  +Y +  L ++AL +F+R+  EF
Sbjct: 71  LIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEF 130

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNM----KRDGMEPNVFTYNILLKALCKNNR 115
             K TVK +N +L+ ++ E  F +    Y+++        ++PN  ++N+++KALC+   
Sbjct: 131 HCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGN 190

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGL 175
           VD A ++   M ++ C  D  +Y+T                              L++GL
Sbjct: 191 VDQAVEVFRGMSDRNCVADGYTYST------------------------------LMHGL 220

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C E +I+EA  LL EM   G  PN + ++ +IS+LC  G++  +  ++  MF++GC PN 
Sbjct: 221 CNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNE 280

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G  L G+  +A  L NRM+    +PN + + TL+ G   +G   + V V   
Sbjct: 281 VTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVS 340

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +EE     N  +YS+LI G  K G      Q+W  M+  GC PN + Y+ ++  LC+   
Sbjct: 341 LEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGK 400

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A   + +M  +   PN+ T+++ + G    G +  A+ +  +M   +C  +   Y+ 
Sbjct: 401 PDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSI 460

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++GL +  ++KEA  +  ++   GI+L++V Y++++HG C A +V +  +L  +ML   
Sbjct: 461 LINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHN 520

Query: 476 TKL--DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            KL  D +T+NI++ A+C +  V+ AI +L+ +   G  +PD I+
Sbjct: 521 PKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQG-CDPDFIT 564



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 238/476 (50%), Gaps = 13/476 (2%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEAREL--- 157
           ++ I+ KA  K +    A  L   MG +  C     S+ T+++ + + G  + A E    
Sbjct: 102 SFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNH 161

Query: 158 ---AMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
              +  F +    G+S +N +I  LC+   +++A  +   M DR    +  TYST++  L
Sbjct: 162 VIDSNSFSNIQPNGLS-FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGL 220

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C+ G ++ ++ +L +M V G  PN  +F  L+      G    AS L + M  +G +PN 
Sbjct: 221 CNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNE 280

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y++L+HGLC  G +D+A+S+  +M  N C PN  T+  L+DGF K G  L   ++   
Sbjct: 281 VTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVS 340

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G   N  +Y+ ++  L +         L ++M  + C PNT+ ++  I GLC  G+
Sbjct: 341 LEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGK 400

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            D A + L +MK     PN  TY+ L+ G      + +A  +  E+       + V Y+ 
Sbjct: 401 PDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSI 460

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR-GG 509
           +++G+C+ G + EA  +  +ML  G KLD + ++ +I+ +C    V   ++L +++    
Sbjct: 461 LINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHN 520

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
            +  PD+++Y  LL   C    +  A   L  ML++G  P+F T ++ +++L  N+
Sbjct: 521 PKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNM 576



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 190/395 (48%), Gaps = 7/395 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  VI +  RVG  +QA+++F  + +         Y+ ++  L  E R      +   M+
Sbjct: 178 FNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQ 237

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
            +G  PN   +N+L+ ALCK   +  A KL+  M  KGC P+ V+Y ++V  +C  G+++
Sbjct: 238 VEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLD 297

Query: 153 EARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A  L  R  +   V N      L++G  K  +  +   +L  + ++G   N  +YS++I
Sbjct: 298 KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLI 357

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           S L   G  E  + +  +M  +GC PN   +++L+ G    G+  EA +    M  +G  
Sbjct: 358 SGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHT 417

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN   YS+L+ G    G + +A+ V  +M +N C  +   YS LI+G  K G L  A  +
Sbjct: 418 PNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIV 477

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--CPPNTVTFNTFIKGL 385
           W +M+S G   +VVAY+ M+   C   +  Q   L  +M   N    P+ VT+N  +   
Sbjct: 478 WKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAF 537

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           C    V  A+ +L+ M    C P+  T +  L  L
Sbjct: 538 CTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 174/384 (45%), Gaps = 44/384 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    LL +M+VEG                                     P    +N
Sbjct: 225 RIDEAVSLLDEMQVEGTF-----------------------------------PNPVAFN 249

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ AL  +   S  + +  NM   G  PN  TYN L+  LC   ++D A  LL  M   
Sbjct: 250 VLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVAN 309

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEE 183
            C P+ +++ T+V    K G+  +   + +        G+  S Y++LI+GL KE K E 
Sbjct: 310 KCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS-YSSLISGLFKEGKGEH 368

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              L  EMV++G  PN I YS +I  LC  G  + +   L +M  +G  PN  +++SL+ 
Sbjct: 369 GMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMW 428

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY   G  H+A  +W  M       + V YS LI+GLC NG + EA+ V  QM       
Sbjct: 429 GYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKL 488

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNG--CSPNVVAYTCMVKVLCQNNMFHQAHS 361
           +V  YS++I GF  A  +    +++N+M+ +     P+VV Y  ++   C  N   +A  
Sbjct: 489 DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAID 548

Query: 362 LIEKMAFENCPPNTVTFNTFIKGL 385
           ++  M  + C P+ +T + F+K L
Sbjct: 549 ILNTMLDQGCDPDFITCDIFLKTL 572



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 161/359 (44%), Gaps = 21/359 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L  K ++D    LL +M       ++  F ++++ + + G A   +++   + E G
Sbjct: 286 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 345

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +     Y+ ++  L  E +      ++  M   G +PN   Y+ L+  LC+  + D A 
Sbjct: 346 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 405

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
           + L+EM NKG  P++ +Y++++    + G + +A    +E+     +   V Y+ LINGL
Sbjct: 406 EYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGL 465

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG--CNP 233
           CK  K++EA  +  +M+ RGI  +V+ YS++I   C+   VE  + +  QM        P
Sbjct: 466 CKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQP 525

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++  LL  +        A D+ N M+ +G  P+ +     +  L  N  MD      
Sbjct: 526 DVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN--MDPPQDGR 583

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             ++E            L+    K    +GAS I   M+     P    +   V+ LC+
Sbjct: 584 EFLDE------------LVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCK 630


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 248/475 (52%), Gaps = 12/475 (2%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P++  + +++  LC+  R+D A+ +L      GC PD V+Y   +  +CK  +V++A +L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 158 AMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             +            Y AL++GL K  +++EA  +L +MV++G  P + TY+ +I  L  
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN----RMIREGFLP 268
            G VE +  I   M   GC P+   +T+L+KG    G+  EA  L+     R      +P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSV-SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           +VV Y++LI GLC  G + EA  V   +  E    P+  TY+++IDG  K G +    + 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M + G  P+ V Y  ++    +  M  +AH +  +M       +TVT+N  + GLC 
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GRV  A      M++  C+  + TY+ L+DG      V  A EL   +   G + N+V+
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ-GKVNNAIQLLDRI 506
           YN I+ G+CRAG + +A+    K+L      D  TFN  ++  C++   V++ ++L + +
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              G  +P++ SY+ L+ GIC +GG++ A    ++M++ G+ P+   +N L+R L
Sbjct: 425 VSQGT-SPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWL 478



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/543 (30%), Positives = 265/543 (48%), Gaps = 57/543 (10%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VFI  +    RV  A Q LK   ++ E    PT   Y  ++D LL   R      +   M
Sbjct: 47  VFIDGLCKAERVDDAFQLLK---KMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQM 103

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G  P + TY +++  L K  RV+ A ++ V+M   GC PDA  YT ++  +CK G+ 
Sbjct: 104 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKP 163

Query: 152 EEA----RELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLC-EMVDRGIDPNVI 201
           EEA    +E   R     +V     Y +LI+GLCK  +I EA  +   E V+RG  P+ +
Sbjct: 164 EEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAV 223

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY++II  LC +G VE       +M  RG  P+  ++ +L+ G++      +A  ++ +M
Sbjct: 224 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 283

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           ++ G + + V Y+ ++ GLC  G + EA +    MEE  C   V TYSAL+DGF   GN+
Sbjct: 284 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 343

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A +++ RM+  GC PN+V+Y  +++ LC+     +A+   EK+      P+  TFN F
Sbjct: 344 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAF 403

Query: 382 IKGLCGCGRVDW---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           + GL  C R+D     ++L + M      PN+ +Y+ L+DG+ R   ++ A E+  E+  
Sbjct: 404 LHGL--CQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVS 461

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  ++V +NT++  +C AG V EA ++  +                            
Sbjct: 462 RGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE---------------------------- 493

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
               L+R        PD  SY SLL G+     M+EA +    M  +G  P    +++ V
Sbjct: 494 ----LER-----RSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRH--YDLTV 542

Query: 559 RSL 561
           R L
Sbjct: 543 RFL 545



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 213/403 (52%), Gaps = 6/403 (1%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +  +INGLC+E +++EAF +L   V  G +P+ +TY+  I  LC    V+ +  +L +M 
Sbjct: 10  FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            + C P   ++T+L+ G L  GR  EA  +  +M+ +G  P +  Y+ +I GL   G ++
Sbjct: 70  EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN----RMISNGCSPNVVAY 343
           EA  +   M  N C P+   Y+ALI G  K+G    A  ++     R       P+VV Y
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           T ++  LC+     +A  + +  A E    P+ VT+ + I GLC  GRV+   +   +M+
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                P+  TY  L+DG ++   + +A  +  ++ + G  ++ VTYN IL G+C+AG V 
Sbjct: 250 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 309

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           EA+     M   G     +T++ ++  +C +G V+ A++L  R+   G   P+++SY  +
Sbjct: 310 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG-CEPNLVSYNII 368

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           + G+C +G + +A+ Y +K+L   +CP+  T+N  +  L   L
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRL 411



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 234/486 (48%), Gaps = 12/486 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I+ L +   +D    LL++M  +    +   + ++++   + G  ++A+ +  ++ E G
Sbjct: 48  FIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG 107

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT+K Y  ++D L    R      I+ +M  +G  P+ F Y  L+K LCK+ + + AY
Sbjct: 108 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAY 167

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEARE------LAMRFGSGVSVYNA 170
            L  E   +       PD V+YT+++  +CK G++ EAR+      +   F      Y +
Sbjct: 168 ALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTS 227

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +I+GLCK  ++EE      EM +RG +P+ +TY+ +I        +  +  +  QM   G
Sbjct: 228 IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSG 287

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
              +  ++  +L G    GR  EA   +  M   G +  VV YS L+ G CS G++  AV
Sbjct: 288 TVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAV 347

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  +M +  C PN+ +Y+ +I G  +AG L  A   + +++     P+V  +   +  L
Sbjct: 348 ELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGL 407

Query: 351 CQN-NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           CQ  +       L E M  +   PN  +++  + G+C  G ++ A+++  +M      P+
Sbjct: 408 CQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPD 467

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +  +N L+  L    RV EA E+  E+E+     +  +Y ++L G+ R   + EA  L  
Sbjct: 468 VVVFNTLIRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDGLSRCERMEEARLLSF 526

Query: 470 KMLIEG 475
            M ++G
Sbjct: 527 HMKLQG 532



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 187/383 (48%), Gaps = 42/383 (10%)

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C+P++ +FT ++ G     R  EA  +  R +R G  P+ V Y+  I GLC    +D+A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNL----------------------------- 321
            +  +M+E  C P   TY+AL+DG  KAG L                             
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 322 ------LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE----KMAFENC 371
                   A +I+  M+ NGC P+   YT ++K LC++    +A++L +    +      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            P+ VT+ + I GLC  GR+  A ++  D+  +   +P+  TY  ++DGL ++ RV+E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           E   E+   G + + VTY  ++ G  +A M+ +A ++  +ML  GT +  +T+NII+   
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK G+V  A      +   G     +++Y++L+ G C+ G +  A    ++ML+ G  PN
Sbjct: 303 CKAGRVAEAYATFLAMEERG-CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361

Query: 551 FATWNVLVRSLFSNLGHLGPVYI 573
             ++N+++R L    G L   Y 
Sbjct: 362 LVSYNIIIRGL-CRAGKLAKAYF 383



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 7/293 (2%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
             +M+  G       + ++I+ + +  +  +A +++ ++ + G   +   YN ILD L  
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
             R +     +  M+  G    V TY+ L+   C    V  A +L   M ++GC P+ VS
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 138 YTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKE-HKIEEAFWLLCEM 191
           Y  I+  +C+ G++ +A     + L  R    V  +NA ++GLC+    + +   L   M
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G  PN+ +YS ++  +C  G +E +L I  +M  RG  P++  F +L++   + GR 
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRV 484

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            EA +++  + R    P+  +Y +L+ GL     M+EA  +S+ M+   C P 
Sbjct: 485 DEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR 536


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 293/600 (48%), Gaps = 40/600 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    + D +  L QQM+  G + +  +F ++I  + R G  + AL +   ++   
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS 265

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---- 116
           L+P V +YN  +D      +  M    +  MK +G+  +  TY  ++  LCK +R+    
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325

Query: 117 -------------------------------DGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                          + AY LL     KGC P  VSY  I+S +
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 146 CKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            + GQV+EA     E+       +S YN +I+ LCK  K+E A  +   M D G+ PNVI
Sbjct: 386 GRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVI 445

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T + ++  LC    ++ +  I   +  + C P+  ++ SL++G    GR  EA  L+ +M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +    +PN V Y++LI      G  ++   +  +M    C P++   +  +D   KAG +
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
                ++  + + G  P+  +YT ++  L +    H+A+ L   M  + C  +T  +NT 
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C  G+V+ A +LL++MK     P + TY  ++DGL +++R+ EA+ L  E +  GI
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           +LN+V Y++++ G  + G + EA+ ++ +++ +G   +  T+N ++ A  K  +++ A+ 
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               ++   +  P+ I+Y+ L+ G+C      +AF++ Q+M  +G  PN  T+  ++  L
Sbjct: 746 CFQSMK-DLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGL 804



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/571 (25%), Positives = 272/571 (47%), Gaps = 9/571 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           ++ +L++M + G   S    I ++ S+ +     +A      +R+   +P    Y +++ 
Sbjct: 149 LEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIG 208

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           AL        +  ++  M+  G   NV  +  L++   +  RVD A  LL EM +    P
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLL 188
           D V Y   +    K G+V+ A +      +   V     Y ++I  LCK  ++ EA  L 
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M      P    Y+T+I      G  E +  +L +   +GC P++ S+  +L      
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  EA   +  M ++  +PN+  Y+ +I  LC  G ++ A+ V   M++    PNV T 
Sbjct: 389 GQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITV 447

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++D   KA  L  A  I+  +    C P+ V Y  +++ L ++    +A+ L E+M  
Sbjct: 448 NIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            N  PN V + + I+    CGR +   K+ ++M +  C P++   N  +D + +   +++
Sbjct: 508 ANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
              L  EI+  G   +  +Y  ++HG+ +AG   EA++L   M  +G  LD   +N +I 
Sbjct: 568 GRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            +CK GKVN A QLL+ ++  G   P +++Y S++ G+     + EA++  ++  ++GI 
Sbjct: 628 GFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686

Query: 549 PNFATWNVLVRSLFSNLGHLGPVY-ILDDIM 578
            N   ++ L+   F  +G +   Y I++++M
Sbjct: 687 LNVVIYSSLIDG-FGKVGRIDEAYLIMEELM 716



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 260/561 (46%), Gaps = 32/561 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G   + +    LL++ + +G   S   +  +++   R G  ++ALK F  +++  
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++D L    +      +   MK  G+ PNV T NI++  LCK  R+D A 
Sbjct: 406 I-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +   + +K C PDAV+Y +                              LI GL +  +
Sbjct: 465 SIFEGLDHKTCRPDAVTYCS------------------------------LIEGLGRHGR 494

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA+ L  +M+D    PN + Y+++I +    G  E    I  +M   GC+P++    +
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
            +      G   +   L+  +   GF+P+  +Y+ LIHGL   G   EA  + Y M+E  
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C  +   Y+ +IDGF K+G +  A Q+   M + G  P VV Y  ++  L + +   +A+
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L E+   +    N V +++ I G    GR+D A  +++++ Q    PN+ T+N LLD L
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++   + EA      ++      N +TY+ ++HG+C+     +AF    +M  +G K + 
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+  +I    K G +  A  L ++ +  G      I Y +++ G+ N+    +A+   +
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI-YNAIIEGLSNANRASDAYRLFE 853

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           +   +G      T  VL+ SL
Sbjct: 854 EARLKGCSIYTKTCVVLLDSL 874



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 228/513 (44%), Gaps = 42/513 (8%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG K ++D      ++MK + +  +   +  +I+   + G  E AL +   +++ GL P 
Sbjct: 385 LGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V   N ++D L    R      I+  +      P+  TY  L++ L ++ RVD AYKL  
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 125 EM---------------------------GNK--------GCAPDAVSYTTIVSSICKLG 149
           +M                           G+K        GC+PD +   T +  + K G
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 150 QVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           ++E+ R L        F      Y  LI+GL K     EA+ L   M ++G   +   Y+
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I   C  G V  +  +L +M  +G  P + ++ S++ G     R  EA  L+     +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   NVV YS+LI G    G +DEA  +  ++ +    PNV T++ L+D   KA  +  A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              +  M    C+PN + Y+ ++  LC+   F++A    ++M  +   PN  T+ T I G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G +  A  L ++ K+   + +   YN +++GL   NR  +A+ L  E    G  + 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             T   +L  + +A  + +A  ++G +L E  K
Sbjct: 864 TKTCVVLLDSLHKAECIEQA-AIVGAVLRETAK 895



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 196/398 (49%), Gaps = 4/398 (1%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN+L+  + +  K      +L EM   G  P+  T   I+ S      +  +   +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
                 P   ++T+L+ G L   R  +    L+ +M   G+  NV  ++TLI      G 
Sbjct: 192 RKLKFRPAFSAYTNLI-GALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D A+S+  +M+ NS  P+V  Y+  ID F KAG +  A + ++ M +NG   + V YT 
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           M+ VLC+ +  ++A  L E M      P    +NT I G    G+ + A  LL++ ++  
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C+P++ +YN +L  L R  +V EA +   E++K  I  N+ TYN ++  +C+AG +  A 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETAL 429

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +   M   G   + IT NI++   CK  ++++A  + + +       PD ++Y SL+ G
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL-DHKTCRPDAVTYCSLIEG 488

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           +   G + EA+   ++ML+    PN   +  L+R+ F 
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 3/278 (1%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  T   ++  F K+  L  A      M      P   AYT ++  L  +       +L
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            ++M       N   F T I+     GRVD A+ LLD+MK     P++  YN  +D   +
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             +V  A++   E++  G+ L+ VTY +++  +C+A  + EA +L   M        A  
Sbjct: 283 AGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA 342

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N +I  Y   GK  +A  LL+R R  G   P ++SY  +L  +   G + EA    ++M
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKG-CIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             + I PN +T+N+++  +    G L    ++ D M +
Sbjct: 402 KKDAI-PNLSTYNIMI-DMLCKAGKLETALVVRDAMKD 437



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/224 (19%), Positives = 83/224 (37%), Gaps = 70/224 (31%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++ K +G+  +  ++ S+I+ + +VG  ++A  +   + + G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719

Query: 61  LKPTVKIYNHILDALLAE-----------------------------------NRFSMIN 85
           L P V  +N +LDAL+                                      +F+   
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKN-------------------------------- 113
             +  M++ G +PNVFTY  ++  L K                                 
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839

Query: 114 ---NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
              NR   AY+L  E   KGC+    +   ++ S+ K   +E+A
Sbjct: 840 SNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/612 (27%), Positives = 284/612 (46%), Gaps = 71/612 (11%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +  K++ V C++     +I+      L ++A+   +R+R     P V  Y  +L   L +
Sbjct: 101 EDFKLDTVLCTQ-----MISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKK 155

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I + M ++G  PN   +N L+ + C       AYKLL  M + GC P  V+Y
Sbjct: 156 KQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAY 215

Query: 139 TTIVSSICKLGQVEEARELAMR-------------------------------------- 160
              + SIC   ++     LA+                                       
Sbjct: 216 NIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQI 275

Query: 161 --------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                   F    S Y+ +I  LC+  K+E+AF L  EM   G++P+V TY+ +I S C 
Sbjct: 276 IKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCK 335

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +E +     +M   GC+ N+ ++T+LL  YL   +  +ASD++NRMI  G  PN + 
Sbjct: 336 AGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTIT 395

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQM----------------EENSCPPNVTTYSALIDGFA 316
           YS L+ GLC  G + +A  V  ++                  +S  PNV TY ALIDG  
Sbjct: 396 YSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLC 455

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA  ++ A ++ + M+SNGC PN + Y  ++   C+      A  +  +M+     P   
Sbjct: 456 KAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVH 515

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ + I  +    R+D AMK+L QM +  C PN+ TY  ++DGL R+   ++A +L++ +
Sbjct: 516 TYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 575

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ G   N+VTY  ++ G+ ++G V  + QL  +M  +G   + +T+ ++I   C  G +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLL 635

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A  LL  ++    W   +  Y S++ G   S     +   L+++ + G  P    + +
Sbjct: 636 DEAHSLLSEMK-QTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGL 692

Query: 557 LVRSLFSNLGHL 568
           L+ + FS  G L
Sbjct: 693 LIDN-FSKAGRL 703



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 235/480 (48%), Gaps = 26/480 (5%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A  +F  ++  G+ P V  Y  ++D+             +  M+  G   NV TY  L
Sbjct: 305 EKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTAL 364

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           L A  K  ++  A  +   M + GC P+ ++Y+ +V  +CK G++++A E+  +      
Sbjct: 365 LHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSD 424

Query: 162 ----------------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
                              V  Y ALI+GLCK HK+ +A  LL  M+  G +PN I Y  
Sbjct: 425 NVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDA 484

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C VG ++ +  +  +M   G  P +H++TSL+       R   A  + ++M+   
Sbjct: 485 LIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESS 544

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNVV Y+ +I GLC  G   +A+ +   MEE  C PNV TY+ALIDG  K+G +  + 
Sbjct: 545 CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSL 604

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           Q++ +M + GC+PN V Y  ++   C   +  +AHSL+ +M     P     + + ++G 
Sbjct: 605 QLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF 664

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
               +   ++ LL++++ +  +P    Y  L+D   +  R++EA EL  E+ +    LNI
Sbjct: 665 --SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNI 722

Query: 446 VT---YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            +   Y +++  +C A  + +AF+L  ++  +G   +   F  +I    K  K N A+QL
Sbjct: 723 TSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 252/598 (42%), Gaps = 95/598 (15%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN 114
            +++FG +P+   YN ++  L    +  M   +   M   G   + FT     +ALCK  
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 115 R--------------------------------VDGAYKLLVEMGNKGCAPDAVSYTTIV 142
           R                                 D A   L  M    C P+ V+Y T++
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 143 SSICK---LGQVEEARELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           +   K   LG  +    + M+ G     S++N+L++  C       A+ LL  M D G  
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209

Query: 198 PNVITYSTIISS-----------------------------------------LCDVGNV 216
           P  + Y+  I S                                         LC +G  
Sbjct: 210 PGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 269

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  I+  M  +G  P+  +++ ++       +  +A  L+  M   G  P+V  Y+ L
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTIL 329

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I   C  G +++A S   +M    C  NV TY+AL+  + KA  L  AS I+NRMI  GC
Sbjct: 330 IDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGC 389

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA-----------FE-----NCPPNTVTFNT 380
            PN + Y+ +V  LC+     +A  +  K+            FE     +  PN VT+  
Sbjct: 390 PPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGA 449

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLC   +V  A +LLD M    C PN   Y+ L+DG  +V ++  A E+   + KCG
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
               + TY +++  + +   +  A ++L +M+      + +T+  +I   C+ G+   A+
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +LL  +   G  +P++++YT+L+ G+  SG +  +     +M  +G  PN+ T+ VL+
Sbjct: 570 KLLSMMEEKG-CSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 224/450 (49%), Gaps = 26/450 (5%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+  +    +M+  G S +   + +++++Y +     QA  +F R+ + G  P    Y+ 
Sbjct: 339 IEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSA 398

Query: 71  ILDALLAENRFSMINPIYSNM----------------KRDGMEPNVFTYNILLKALCKNN 114
           ++D L           +Y+ +                  D + PNV TY  L+  LCK +
Sbjct: 399 LVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAH 458

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYN 169
           +V  A +LL  M + GC P+ + Y  ++   CK+G+++ A+E+ +R         V  Y 
Sbjct: 459 KVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYT 518

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           +LI+ + K+ +++ A  +L +MV+    PNV+TY+ +I  LC +G  + +L +L  M  +
Sbjct: 519 SLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEK 578

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           GC+PN+ ++T+L+ G    G+   +  L+ +M  +G  PN V Y  LI+  C+ G +DEA
Sbjct: 579 GCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEA 638

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
            S+  +M++   P  +  Y +++ GF+K    + +  +   + S+G  P    Y  ++  
Sbjct: 639 HSLLSEMKQTYWPKYLQGYCSVVQGFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDN 696

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVT---FNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
             +     +A  L ++M   +   N  +   + + I+ LC   +++ A +L  ++ +   
Sbjct: 697 FSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGV 756

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +P ++ +  L+ GL++VN+  EA +L   I
Sbjct: 757 VPELSVFVCLIKGLIKVNKWNEALQLCYSI 786



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 197/448 (43%), Gaps = 61/448 (13%)

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           E+ D G  P+  TY+ ++  L   G ++    +  +M   G   +  +     +     G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R    SD    + RE F  + V  + +I GL      DEA+S  ++M  NSC PNV TY 
Sbjct: 90  RW---SDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+ GF K   L    +I N M+  GC+PN   +  +V   C    +  A+ L+++MA  
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206

Query: 370 NCPPNTVTFNTFI-----------------------------------------KGLCGC 388
            CPP  V +N FI                                         + LCG 
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGM 266

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G+ D A +++  M     +P+ +TY++++  L    +V++AF L  E++  G+  ++ TY
Sbjct: 267 GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTY 326

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             ++   C+AG++ +A     +M   G   + +T+  +++AY K  ++  A  + +R+  
Sbjct: 327 TILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID 386

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAF----------------IYLQKMLNEGICPNFA 552
            G   P+ I+Y++L+ G+C +G +Q+A                  Y +    + I PN  
Sbjct: 387 AG-CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVV 445

Query: 553 TWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           T+  L+  L      +    +LD +++N
Sbjct: 446 TYGALIDGLCKAHKVVDAQELLDAMLSN 473



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 41/337 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++   Q LL  M   G   +  ++ ++I+ + +VG  + A ++F R+ + G
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PTV  Y  ++DA+  + R  +   + S M      PNV TY  ++  LC+      A 
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KLL  M  KGC+P+ V+YT ++  + K G+V+ + +L ++  +         Y  LIN  
Sbjct: 570 KLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHC 629

Query: 176 CKEHKIEEA----------FW-----------------------LLCEMVDRGIDPNVIT 202
           C    ++EA          +W                       LL E+   G  P    
Sbjct: 630 CAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPV 689

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS---FTSLLKGYLLGGRTHEASDLWN 259
           Y  +I +    G +E +L +  +M     + NI S   +TSL++   L  +  +A +L++
Sbjct: 690 YGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYS 749

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
            + R+G +P +  +  LI GL      +EA+ + Y +
Sbjct: 750 EITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSI 786



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 45/275 (16%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           +I+ + +   +D    +L QM VE  SC+  V  + ++I+   R+G  ++ALK+   + E
Sbjct: 520 LIDAMFKDRRLDLAMKVLSQM-VES-SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEE 577

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G  P V  Y  ++D L    +  +   ++  M   G  PN  TY +L+   C    +D 
Sbjct: 578 KGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDE 637

Query: 119 AYKLLVEMG---------------------------------NKGCAPDAVSYTTIVSSI 145
           A+ LL EM                                  + G  P A  Y  ++ + 
Sbjct: 638 AHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNF 697

Query: 146 CKLGQVEEAREL---AMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGID 197
            K G++EEA EL    M   S +++     Y +LI  LC   ++E+AF L  E+  +G+ 
Sbjct: 698 SKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVV 757

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           P +  +  +I  L  V     +L +   +   G N
Sbjct: 758 PELSVFVCLIKGLIKVNKWNEALQLCYSICDEGVN 792


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 273/553 (49%), Gaps = 41/553 (7%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           +GVS    +F + IN++ + G  E+A+K+F ++ E G+ P V  +N ++D L    R+  
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                  M   GMEP + TY+IL+K L +  R+  AY +L EM  KG  P+ + Y  ++ 
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373

Query: 144 SICKLGQVEEARELA-MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S  + G + +A E+  +    G+S+    YN LI G CK  + + A  LL EM+  G + 
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  +++++I  LC     +++L  +G+M +R  +P     T+L+ G    G+  +A +LW
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV--------------SVSY---------- 294
            + + +GF+ +    + L+HGLC  G +DEA                VSY          
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553

Query: 295 -----------QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
                      +M +    P+  TYS LI G      +  A Q W+    NG  P+V  Y
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           + M+   C+     +     ++M  +N  PNTV +N  I+  C  GR+  A++L + MK 
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN  TY  L+ G+  ++RV+EA  L  E+   G++ N+  Y  ++ G  + G +V+
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
              LL +M  +    + IT+ ++I  Y + G V  A +LL+ +R  G   PD I+Y   +
Sbjct: 734 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFI 792

Query: 524 WGICNSGGMQEAF 536
           +G    GG+ EAF
Sbjct: 793 YGYLKQGGVLEAF 805



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 278/538 (51%), Gaps = 8/538 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           AL +F  +   G+ P+    N +L +L+  N F      +  + + G+ P+V+ +   + 
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGV 165
           A CK  +V+ A KL  +M   G AP+ V++ T++  +   G+ +EA   +E  +  G   
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328

Query: 166 SV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           ++  Y+ L+ GL +  +I +A+++L EM  +G  PNVI Y+ +I S  + G++  ++ I 
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +G +    ++ +L+KGY   G+   A  L   M+  GF  N  +++++I  LCS+
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
              D A+    +M   +  P     + LI G  K G    A ++W + ++ G   +    
Sbjct: 449 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 508

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+     +A  + +++    C  + V++NT I G CG  ++D A   LD+M +
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY+ L+ GL  +N+V+EA +   + ++ G+  ++ TY+ ++ G C+A    E
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +   +M+ +  + + + +N +I AYC+ G+++ A++L + ++  G  +P+  +YTSL+
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLI 687

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G+     ++EA +  ++M  EG+ PN   +  L+   +  LG +  V  L   M +K
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG-YGKLGQMVKVECLLREMHSK 744



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 237/485 (48%), Gaps = 9/485 (1%)

Query: 104 NILLKALCKNNRVDGAY---KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           ++L++  C   + DG Y    +   + NKG  P   +   +++S+ +  + ++  E    
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GVS    ++   IN  CK  K+EEA  L  +M + G+ PNV+T++T+I  L   G  
Sbjct: 252 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 311

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +     +M  RG  P + +++ L+KG     R  +A  +   M ++GF PNV+ Y+ L
Sbjct: 312 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 371

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I      GS+++A+ +   M         +TY+ LI G+ K G    A ++   M+S G 
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N  ++T ++ +LC + MF  A   + +M   N  P      T I GLC  G+   A++
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  Q      + +  T N LL GL    ++ EAF +  EI   G  ++ V+YNT++ G C
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               + EAF  L +M+  G K D  T++I+I       KV  AIQ  D  +  G   PD+
Sbjct: 552 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDV 610

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +Y+ ++ G C +   +E   +  +M+++ + PN   +N L+R+ +   G L     L +
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA-YCRSGRLSMALELRE 669

Query: 577 IMANK 581
            M +K
Sbjct: 670 DMKHK 674



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 216/475 (45%), Gaps = 43/475 (9%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + +  +   +R+G A   LK    + + G  P V +YN+++D+ +     +    I   M
Sbjct: 335 ILVKGLTRAKRIGDAYFVLK---EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 391

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--------------------- 130
              G+     TYN L+K  CKN + D A +LL EM + G                     
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451

Query: 131 --------------CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNAL 171
                          +P     TT++S +CK G+  +A EL  +F   G  V     NAL
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GLC+  K++EAF +  E++ RG   + ++Y+T+IS  C    ++ +   L +M  RG 
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+ ++++ L+ G     +  EA   W+   R G LP+V  YS +I G C     +E   
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +M   +  PN   Y+ LI  + ++G L  A ++   M   G SPN   YT ++K + 
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
             +   +A  L E+M  E   PN   +   I G    G++     LL +M      PN  
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           TY  ++ G  R   V EA  L+ E+ + GI  + +TY   ++G  + G V+EAF+
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D     + +M +  +S   G+  ++I+   + G   +AL+++++    G     +  N 
Sbjct: 451 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 510

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L    +      I   +   G   +  +YN L+   C   ++D A+  L EM  +G
Sbjct: 511 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 570

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAF 185
             PD  +Y+ ++  +  + +VEEA +      R G    V  Y+ +I+G CK  + EE  
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 630

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               EM+ + + PN + Y+ +I + C  G +  +L +   M  +G +PN  ++TSL+KG 
Sbjct: 631 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 690

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            +  R  EA  L+  M  EG  PNV  Y+ LI G    G M +   +  +M   +  PN 
Sbjct: 691 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 750

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            TY+ +I G+A+ GN+  AS++ N M   G  P+ + Y
Sbjct: 751 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 40/310 (12%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++D     L +M   G+      +  +I     +   E+A++ +   +  G+ P V  
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ ++D      R       +  M    ++PN   YN L++A C++ R+  A +L  +M 
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           +KG +P++ +YT+++  +  + +VEEA+                               L
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAK------------------------------LL 702

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM   G++PNV  Y+ +I     +G +     +L +M  +  +PN  ++T ++ GY  
Sbjct: 703 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 762

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   EAS L N M  +G +P+ + Y   I+G    G + EA   S   EEN        
Sbjct: 763 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD--EEN-------- 812

Query: 308 YSALIDGFAK 317
           Y+A+I+G+ K
Sbjct: 813 YAAIIEGWNK 822


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 259/503 (51%), Gaps = 6/503 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A+    +F ++  +   M+R  +   ++TYNIL+   C+ +++  A  L
Sbjct: 83  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+ +++++  C   ++ +A  L      M +      +  LI+GL  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV RG  PN++TY  +++ LC  G+ + +L +L +M       ++  
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F +++          +A +L+  M  +G  PNVV YS+LI  LCS G   +A  +   M 
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PN+ T++ALID F K G  + A ++++ MI     P++  Y  +V   C ++   
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  + E M  ++C P+ VT+NT IKG C   RV+   +L  +M     + +  TY  L+
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL        A ++  ++   G+  +I+TY+ +L G+C  G + +A ++   M     K
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           LD   +  +I   CK GKV++   L   +   G   P++++Y +++ G+C+   +QEA+ 
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
            L+KM  +G  PN  T+N L+R+
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRA 584



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 256/477 (53%), Gaps = 5/477 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R      AL +  ++ + G +P++   + +L+      R S    +   M   G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+  T+  L+  L  +N+   A  L+  M  +GC P+ V+Y  +V+ +CK G  + A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L     A +  + V ++N +I+ LCK   +++A  L  EM  +GI PNV+TYS++IS L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G    +  +L  M  +  NPN+ +F +L+  ++  G+  EA  L++ MI+    P++
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y++L++G C +  +D+A  +   M    C P+V TY+ LI GF K+  +   ++++  
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G   + V YT +++ L  +     A  + ++M  +  PP+ +T++  + GLC  G+
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+++ D M++ E   +I  Y  +++G+ +  +V + ++L   +   G++ N+VTYNT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           ++ G+C   ++ EA+ LL KM  +G   ++ T+N +I A+ + G    + +L+  +R
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  R+ + G +P +  Y  +++ L 
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   +E +V  +N ++ +LCK   VD A  L  EM  KG  P+ V
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A +L       +    +  +NALI+   KE K  EA  L  +M
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TY+++++  C    ++ +  +   M  + C P++ ++ +L+KG+    R 
Sbjct: 357 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            + ++L+  M   G + + V Y+TLI GL  +G  D A  V  QM  +  PP++ TYS L
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G L  A ++++ M  +    ++  YT M++ +C+         L   ++ +  
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+NT I GLC    +  A  LL +MK+   LPN  TYN L+   LR      + E
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 597 LIREMRSC 604



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 213/397 (53%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M    I   + TY+ +I+  C    +  +L +LG+M 
Sbjct: 88  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  +A  L ++M+  G+ P+ + ++TLIHGL  +    
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M +  C PN+ TY  +++G  K G+   A  + N+M +     +VV +  ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D  ++  +  EA +L  ++ K  I  +I TYN++++G C    + +A Q+
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    D +T+N +I  +CK  +V +  +L   +   G    D ++YT+L+ G+ 
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLF 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + G    A    ++M+++G+ P+  T+++L+  L +N
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 205/400 (51%), Gaps = 6/400 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   + G  + AL +  ++    ++  V I+N I+D+L           ++  M+  G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LC   R   A +LL +M  K   P+ V++  ++ +  K G+  EA 
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L            +  YN+L+NG C   ++++A  +   MV +   P+V+TY+T+I   
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    VE    +  +M  RG   +  ++T+L++G    G    A  ++ +M+ +G  P++
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + YS L+ GLC+NG +++A+ V   M+++    ++  Y+ +I+G  KAG +     ++  
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G  PNVV Y  M+  LC   +  +A++L++KM  +   PN+ T+NT I+     G 
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 591 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 629



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 182/338 (53%), Gaps = 5/338 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++M+ +G+  +   + S+I+     G    A ++   + E  
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  +N ++DA + E +F     +Y +M +  ++P++FTYN L+   C ++R+D A 
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
           ++   M +K C PD V+Y T++   CK  +VE+     RE++ R   G +V Y  LI GL
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             +   + A  +  +MV  G+ P+++TYS ++  LC+ G +E +L +   M       +I
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           + +T++++G    G+  +  DL+  +  +G  PNVV Y+T+I GLCS   + EA ++  +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           M+E+   PN  TY+ LI    + G+   ++++   M S
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 181/371 (48%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ + D    LL +M+   +     +F ++I+S  +    + AL +F  +   G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L +  R+S  + + S+M    + PN+ T+N L+ A  K  +   A 
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  +M  +   PD  +Y ++V+  C   ++++A+++     S      V  YN LI G 
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+   L  EM  RG+  + +TY+T+I  L   G+ + +  +  QM   G  P+I
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++ LL G    G+  +A ++++ M +     ++  Y+T+I G+C  G +D+   +   
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      PNV TY+ +I G      L  A  +  +M  +G  PN   Y  +++   ++  
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590

Query: 356 FHQAHSLIEKM 366
              +  LI +M
Sbjct: 591 KAASAELIREM 601



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    + D  Q + +QM  +GV      +  +++     G  E+AL++F  +++  
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  + IY  +++ +    +      ++ ++   G++PNV TYN ++  LC    +  AY
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            LL +M   G  P++ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 621 HDGRLDKSF 629


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 169/567 (29%), Positives = 289/567 (50%), Gaps = 12/567 (2%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ LG+  ++D V  ++++M  +G  C     IS  ++    G  E A +        G
Sbjct: 468  LIDVLGKGGQMDKVLAIIKEMVEKGGEC----IISRDSNAGHEGTIEGADRTV-EYPSLG 522

Query: 61   LKPTVKI-YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
             K   +I YN ++ A +          +   MK+    P V TY  L+  L K  R+D A
Sbjct: 523  FKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEA 582

Query: 120  YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALING 174
              LL EM  +GC P  V+Y+++++S  K  Q EE+  L    +R G  + VS Y+ +IN 
Sbjct: 583  VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC 642

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            LCK   +++A  +   M + G++P +  Y T++SSL     ++ +L I  ++      P+
Sbjct: 643  LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
               +  ++ G +   R  EA  L + M  +  LP++  Y++L+ GL  +G ++EA ++  
Sbjct: 703  TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +M E    P+V  Y++L+D   K G L  A  I+  M    C P+VV Y+ ++  L +  
Sbjct: 763  KMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822

Query: 355  MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               +A+   E    + C PN   +++ I      G VD A++L ++M++ +C PNI TYN
Sbjct: 823  RVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYN 882

Query: 415  ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             LL GL +  R+  A +L+ E+EK G   ++VTYN ++ GV + GMV EA     +M  +
Sbjct: 883  NLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942

Query: 475  GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            G   D ITF  +I +  K  K+  A +L D +   G +NP +++Y  L+  +  +G + E
Sbjct: 943  GIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG-YNPSVVTYNVLIDILGRAGKVHE 1001

Query: 535  AFIYLQKMLNEGICPNFATWNVLVRSL 561
            A +   +M  +G  P+  T  ++ R L
Sbjct: 1002 AAMIFHEMKVKGCMPDGITIGIMKRIL 1028



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 178/608 (29%), Positives = 294/608 (48%), Gaps = 41/608 (6%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ LG+  E D    L ++MK  G+  +   +  +I+   + G   +A ++F+ ++E G
Sbjct: 398  LIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQG 457

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME----------------------- 97
              P V  YN ++D L    +   +  I   M   G E                       
Sbjct: 458  AVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVE 517

Query: 98   -PNV-------FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
             P++        TYN L+ A   N  VD A KLL  M    C P  V+YTT+V  + K G
Sbjct: 518  YPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAG 577

Query: 150  QVEEA----RELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            +++EA    RE+  +     V  Y++L+    K  + EE+  L  EMV +G   +V TYS
Sbjct: 578  RLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYS 637

Query: 205  TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
             +I+ LC   +V+ +L + G+M   G  P + ++ +LL   +   +   A  ++N +   
Sbjct: 638  LVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQES 697

Query: 265  GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
              +P+   Y+ +++GL  +  +DEA  +   M+  +  P++ TY++L+DG  K+G L  A
Sbjct: 698  SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757

Query: 325  SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              ++ +M   G  P+VVAYT ++ VL +      A  +   MA + C P+ VT+++ I  
Sbjct: 758  FNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDS 817

Query: 385  LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            L   GRV+ A    +      C PN+  Y+ L+D   +   V  A EL  E+++     N
Sbjct: 818  LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877

Query: 445  IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            IVTYN +L G+ +AG +  A +LL +M   G   D +T+NI+I    K G V+ A     
Sbjct: 878  IVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFK 937

Query: 505  RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            R++  G   PD+I++TSL+  +     + EA      M  EG  P+  T+NVL+      
Sbjct: 938  RMKEKG-IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLI----DI 992

Query: 565  LGHLGPVY 572
            LG  G V+
Sbjct: 993  LGRAGKVH 1000



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 157/621 (25%), Positives = 289/621 (46%), Gaps = 46/621 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI++L    E D V  +L  M  EG   S  +  S++ ++        AL++F +++ FG
Sbjct: 188 MIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFG 247

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+  +YN +L+ L+    +     ++  + +  ++P+  T+ I + +  ++ R+D A 
Sbjct: 248 CNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAA 307

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           + + EM   G  P   ++T ++ ++ K G ++EA +       +R    V  Y  L+NGL
Sbjct: 308 EPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGL 367

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++EEA  +  EM +    P+ I Y+T+I  L   G  + + G+  +M  RG  PN+
Sbjct: 368 AKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNL 427

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++      GR  EA  L++ +  +G +P+V  Y+TLI  L   G MD+ +++  +
Sbjct: 428 RTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKE 487

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E      ++  S         G + GA +          S   + Y  ++     N  
Sbjct: 488 MVEKGGECIISRDS----NAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L+E M    C P  VT+ T + GL   GR+D A+ LL +M++  C P++ TY+ 
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSS 603

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+    + ++ +E+  L  E+ + G   ++ TY+ +++ +C++  V +A  + G+M  EG
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEG 663

Query: 476 TK-----------------------------------LDAITFNIIIYAYCKQGKVNNAI 500
            +                                    D   +NI++    K  +V+ A 
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEAC 723

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L+D ++      PD+ +YTSLL G+  SG ++EAF    KM  EG  P+   +  L+  
Sbjct: 724 KLVDSMKNQNIL-PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLM-D 781

Query: 561 LFSNLGHLGPVYILDDIMANK 581
           +    G L    I+   MA K
Sbjct: 782 VLGKGGKLSHALIIFRAMAKK 802



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 156/634 (24%), Positives = 291/634 (45%), Gaps = 76/634 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           +I+ L +   ID        MK   + CS  V  + +++N   + G  E+A ++F  ++E
Sbjct: 328 LIDALVKSGNIDEACKFFNGMK--NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
               P    YN ++D L       M   ++  MK  G+ PN+ TYNI++  L K  R   
Sbjct: 386 NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPE 445

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGS----------- 163
           A++L  ++  +G  PD  +Y T++  + K GQ+++     +E+  + G            
Sbjct: 446 AWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGH 505

Query: 164 ---------------------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
                                G   YN L++       ++EA  LL  M      P V+T
Sbjct: 506 EGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT 565

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+T++  L   G ++ ++ +L +M  +GC P++ +++SL+  +    +  E+  L++ M+
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R+G + +V  YS +I+ LC +  +D+A+ V  +M+E    P +  Y  L+    K   + 
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A QI+N +  +   P+   Y  MV  L ++N   +A  L++ M  +N  P+  T+ + +
Sbjct: 686 FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745

Query: 383 KGLCGCGRVDWAMKLLDQMKQ-----------------------------------YECL 407
            GL   GR++ A  +  +M +                                     C+
Sbjct: 746 DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCV 805

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ TY+ L+D L +  RV+EA+         G   N+  Y++++    + GMV  A +L
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M       + +T+N ++    K G++N A +LL+ +   G   PD+++Y  L+ G+ 
Sbjct: 866 FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG-CVPDLVTYNILIDGVG 924

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G + EA  Y ++M  +GI P+  T+  L+ SL
Sbjct: 925 KMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/538 (24%), Positives = 247/538 (45%), Gaps = 37/538 (6%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G   TV  Y  ++  L        +  I + M ++G   ++     LL+     N V GA
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALING 174
            ++  +M + GC P    Y  ++  + K G    A     +    R       +   ++ 
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             +  +++ A   + EM+  GIDP V T++ +I +L   GN++ +      M    C+PN
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+L+ G    GR  EA +++  M      P+ +AY+TLI GL   G  D A  +  
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M++    PN+ TY+ +I    KAG    A Q+++ +   G  P+V  Y  ++ VL +  
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476

Query: 355 MFHQAHSLIEKMAFENCP------------------------PN-------TVTFNTFIK 383
              +  ++I++M  +                           P+        +T+NT + 
Sbjct: 477 QMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMS 536

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
                G VD A+KLL+ MK++EC+P + TY  L+DGL +  R+ EA  L+ E+EK G + 
Sbjct: 537 AFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEP 596

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++VTY++++    +     E+  L  +M+ +G   D  T++++I   CK   V+ A+ + 
Sbjct: 597 SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            R++  G   P + +Y +LL  +     +  A     ++    + P+   +N++V  L
Sbjct: 657 GRMKEEG-MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 232/510 (45%), Gaps = 39/510 (7%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           ++DG    V TY +++K L      D   ++L  M  +G        T+++ +      V
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A E+  +  S       ++YN ++  L K      A  +  ++    I P+  T+   
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           + S    G ++ +   + +M   G +P +H+FT L+   +  G   EA   +N M     
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PNVV Y+TL++GL   G ++EA  V  +M+EN+C P+   Y+ LIDG  KAG    A  
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M   G  PN+  Y  M+ VL +     +A  L   +  +   P+  T+NT I  L 
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473

Query: 387 GCGRVDWAMKLLDQM--KQYECL----------------------PNI-------TTYNE 415
             G++D  + ++ +M  K  EC+                      P++        TYN 
Sbjct: 474 KGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNT 533

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+   +    V EA +L+  ++K      +VTY T++ G+ +AG + EA  LL +M  +G
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            +   +T++ ++ ++ K+ +   ++ L D  +R G     D+ +Y+ ++  +C S  + +
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG--CVADVSTYSLVINCLCKSDDVDQ 651

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           A     +M  EG+ P    +  L+ SL  +
Sbjct: 652 ALDVFGRMKEEGMEPLLGNYKTLLSSLVKD 681



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 194/393 (49%), Gaps = 44/393 (11%)

Query: 9    CEIDGVQYLLQ---QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
            C+ D V   L    +MK EG+    G + ++++S  +    + AL++F  ++E  L P  
Sbjct: 644  CKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703

Query: 66   KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             +YN +++ L+  NR      +  +MK   + P++FTY  LL  L K+ R++ A+ +  +
Sbjct: 704  FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763

Query: 126  MGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGLCKEHK 180
            M  +G  PD V+YT+++  + K G++  A    R +A  R    V  Y++LI+ L KE +
Sbjct: 764  MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823

Query: 181  IEEAFWLL-------CE-----------------MVDRGID-----------PNVITYST 205
            +EEA++         C                  MVDR ++           PN++TY+ 
Sbjct: 824  VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883

Query: 206  IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            ++S L   G +  +  +L +M   GC P++ ++  L+ G    G   EA   + RM  +G
Sbjct: 884  LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943

Query: 266  FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             +P+V+ +++LI  L     + EA  +   MEE    P+V TY+ LID   +AG +  A+
Sbjct: 944  IVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAA 1003

Query: 326  QIWNRMISNGCSPNVVAYTCMVKVLC-QNNMFH 357
             I++ M   GC P+ +    M ++L  +   FH
Sbjct: 1004 MIFHEMKVKGCMPDGITIGIMKRILSVREQQFH 1036


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 169/568 (29%), Positives = 276/568 (48%), Gaps = 10/568 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L +     G + +L  MK  G+  +   F  V+ SY R G    ALK+   ++  G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + I N  +D  +  NR          M+  G+ PNV TYN +++  C  +RV+ A 
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +LL +M +KGC PD VSY TI+  +CK  ++ E R+L  +      +      YN LI+ 
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNP 233
           L K    +EA W L +  ++G   + + YS I+ +LC  G +  +  ++ +M  +G C P
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 452

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++T+++ G+   G   +A  L   M   G  PN V+Y+ L++G+C  G   EA  + 
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
              EE+   PN  TYS ++ G  + G L  A  +   M+  G  P  V    +++ LC++
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H+A   +E+   + C  N V F T I G C    +D A+ +LD M       ++ TY
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+D L +  R+ EA EL+ ++   GI    VTY T++H  C+ G V +   +L KM I
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM-I 691

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
              K   I +N +I   C  GK+  A  LL ++      + D  +  +L+ G    G   
Sbjct: 692 SRQKCRTI-YNQVIEKLCVLGKLEEADTLLGKVLRTASRS-DAKTCYALMEGYLKKGVPL 749

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            A+    +M N  + P+      L + L
Sbjct: 750 SAYKVACRMFNRNLIPDVKMCEKLSKRL 777



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 254/489 (51%), Gaps = 17/489 (3%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-REL 157
           +   Y  +L+ L K     G+ ++LV M  +G      +++ ++ S  + GQ+ +A + L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 158 AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            +   +GV     + N  I+   + +++E+A   L  M   GI PNV+TY+ +I   CD+
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG-GRTHEASDLWNRMIRE-GFLPNVV 271
             VE ++ +L  M  +GC P+  S+ +++ GYL    R  E  DL  +M +E G +P+ V
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIM-GYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TLIH L  +   DEA+      +E     +   YSA++    K G +  A  + N M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444

Query: 332 ISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +S G C P+VV YT +V   C+     +A  L++ M      PNTV++   + G+C  G+
Sbjct: 445 LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK 504

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              A ++++  +++   PN  TY+ ++ GL R  ++ EA ++V E+   G     V  N 
Sbjct: 505 SLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINL 564

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L  +CR G   EA + + + L +G  ++ + F  +I+ +C+  +++ A+ +LD +    
Sbjct: 565 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLIN 624

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGP 570
           + + D+ +YT+L+  +   G + EA   ++KML++GI P   T+    R++      +G 
Sbjct: 625 K-HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTY----RTVIHRYCQMGK 679

Query: 571 VYILDDIMA 579
           V   DD++A
Sbjct: 680 V---DDLVA 685



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 189/428 (44%), Gaps = 46/428 (10%)

Query: 14  VQYLLQQM-KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           V+ L+++M K  G+   +  + ++I+   +   A++AL      +E G +     Y+ I+
Sbjct: 366 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 425

Query: 73  DALLAENRFSMINPIYSNMKRDGM-EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
            AL  E R S    + + M   G   P+V TY  ++   C+   VD A KLL  M   G 
Sbjct: 426 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 485

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL---------------------AMR---------- 160
            P+ VSYT +++ +C+ G+  EARE+                      +R          
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545

Query: 161 ---------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                    F  G    N L+  LC++ +  EA   + E +++G   NV+ ++T+I   C
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               ++ +L +L  M++   + ++ ++T+L+      GR  EA++L  +M+ +G  P  V
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 665

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
            Y T+IH  C  G +D+ V++  +M     C    T Y+ +I+     G L  A  +  +
Sbjct: 666 TYRTVIHRYCQMGKVDDLVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGK 722

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           ++      +      +++   +  +   A+ +  +M   N  P+        K L   G+
Sbjct: 723 VLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGK 782

Query: 391 VDWAMKLL 398
           VD A KL+
Sbjct: 783 VDEADKLM 790



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 38/328 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D  + LLQ M   G   +   + +++N   R G + +A +M     E    P    Y+
Sbjct: 469 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS 528

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+  L  E + S    +   M   G  P     N+LL++LC++ R   A K + E  NK
Sbjct: 529 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEA 184
           GCA + V++TT++   C+  +++ A  +      +   + V  Y  L++ L K+ +I EA
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEA 648

Query: 185 FWLLCEMVDRGIDPNVITYSTII---------------------------------SSLC 211
             L+ +M+ +GIDP  +TY T+I                                   LC
Sbjct: 649 TELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLC 708

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            +G +E +  +LG++       +  +  +L++GYL  G    A  +  RM     +P+V 
Sbjct: 709 VLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVK 768

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
               L   L   G +DEA  +  ++ E 
Sbjct: 769 MCEKLSKRLVLKGKVDEADKLMLRLVER 796



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           +VFTY  L+  L K  R+  A +L+ +M +KG  P  V+Y T++   C++G+V++   + 
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 687

Query: 159 MRFGSGV---SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            +  S     ++YN +I  LC   K+EEA  LL +++      +  T   ++      G 
Sbjct: 688 EKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 747

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             ++  +  +MF R   P++     L K  +L G+  EA  L  R++  G +
Sbjct: 748 PLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHI 799


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/509 (30%), Positives = 261/509 (51%), Gaps = 6/509 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P++  +  +L ++     +S +  + + M   G+ PNV+T NIL
Sbjct: 47  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 106

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C  NRV  A+ +L ++   G  PD  ++TT++  +C  G++ EA  L  +     F
Sbjct: 107 INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGF 166

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      P+V+ Y++II SLC    V  +  
Sbjct: 167 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 226

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  QM  +G +P+I ++TSL+            + L N+M+    LP+VV +ST++  LC
Sbjct: 227 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 286

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  +   M +    P+V TY+ L+DG      +  A ++++ M+  G +P+V+
Sbjct: 287 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +YT ++   C+ +   +A  L E+M  +   P+T T+NT + GLC  GR+  A+ L  +M
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P++ TY+ LLD L +   ++EA  L+  IE   +  +I  YN I+ G+CRAG +
Sbjct: 407 VARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 466

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  L   +  +G      T+NI+I+  CK+G +N A +L   +  G + +PD  +Y +
Sbjct: 467 EAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM-DGNDCSPDGCTYNT 525

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           +  G   +     A   L++ML  G   +
Sbjct: 526 IARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 241/472 (51%), Gaps = 5/472 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L  QM   GV  +      +INS+  +     A  +  +I + G +P    +  ++ 
Sbjct: 84  VLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIR 143

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  E +      ++  M  +G +PNV TY  L+  LCK      A +LL  M    C P
Sbjct: 144 GLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQP 203

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
           D V YT+I+ S+CK  QV EA  L +   G G+S     Y +L++ LC   + +    LL
Sbjct: 204 DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLL 263

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +MV+  I P+V+ +ST++ +LC  G V  +  I+  M  RG  P++ ++T+L+ G+ L 
Sbjct: 264 NQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQ 323

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               EA  +++ M+R+GF P+V++Y+TLI+G C    +D+A+ +  +M      P+  TY
Sbjct: 324 SEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTY 383

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + L+ G    G L  A  +++ M++ G  P++V Y+ ++  LC+N    +A +L++ +  
Sbjct: 384 NTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEA 443

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            N  P+   +N  I G+C  G ++ A  L   +      P++ TYN ++ GL +   + E
Sbjct: 444 SNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNE 503

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           A +L  E++      +  TYNTI  G  +    + A QLL +ML  G   D+
Sbjct: 504 ANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 63/135 (46%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   ++    LL+ ++   ++    V+  +I+   R G  E A  +F  +   G
Sbjct: 421 LLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 480

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P+V  YN ++  L      +  N ++  M  +   P+  TYN + +   +NN    A 
Sbjct: 481 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 540

Query: 121 KLLVEMGNKGCAPDA 135
           +LL EM  +G + D+
Sbjct: 541 QLLEEMLARGFSADS 555


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 280/541 (51%), Gaps = 13/541 (2%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGL 61
           L    + D V  L +QM+++G++        +IN +   R++G A  A+   +++   G 
Sbjct: 100 LARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKL---GY 156

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P    +N +L+ L  E R      +   M      P++ T N ++  LC  +RV  A  
Sbjct: 157 EPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVD 216

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLC 176
           L+  M   GC P+  +Y  I++ +CK G    A +L       +    V  Y  +I+ LC
Sbjct: 217 LIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLC 276

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K+ ++++A     EM  +GI  NV TY+++I S C  G  +    +L  M  R   PN+ 
Sbjct: 277 KDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVV 336

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F++L+   +  G+  EA DL+N MI  G  PN + Y++LI+GLC++  +DEA  +   M
Sbjct: 337 TFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM 396

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
               C P++ TY+ LI+GF KA  +    +++ +M   G   + V Y+ +++  CQ+   
Sbjct: 397 VSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKL 456

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  + ++M  +   P  +T+   + GLC  G ++ A+ +LDQM + +   +I  YN +
Sbjct: 457 IVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNII 516

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G+   N+V +A+ L   +   G++ +I +YN +L G+C+   + EA  L  KM  +G 
Sbjct: 517 IHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGY 576

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + D  T+N +I A+ +   +  ++QL++ ++  G ++ D  S   ++  + +SG + ++F
Sbjct: 577 EPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG-FSSD-ASTVKIVMDMLSSGELDKSF 634

Query: 537 I 537
           +
Sbjct: 635 L 635



 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/536 (28%), Positives = 269/536 (50%), Gaps = 13/536 (2%)

Query: 37  INSYR---RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           ++SY+   R GL +     A+ +F  +      PTV  +N +   L    ++ ++  +  
Sbjct: 55  MSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCK 114

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            M+  G+  +++T NI++   C+  ++  A+  + ++   G  P+ V++ T+++ +C  G
Sbjct: 115 QMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEG 174

Query: 150 QVEEARELA--MRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +V EA EL   M     V      N ++NGLC + ++ EA  L+  M+  G  PN  TY 
Sbjct: 175 RVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYG 234

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            I++ +C  GN  ++L +L +M  R   P++ ++T ++      GR  +A   ++ M  +
Sbjct: 235 PILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK 294

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   NV  Y++LI   CS G  D+   +   M      PNV T+SALID   K G L  A
Sbjct: 295 GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA 354

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             ++N MI+ G  PN + Y  ++  LC +    +A+ +++ M  + C P+  T+N  I G
Sbjct: 355 KDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILING 414

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C   +VD  M+L  +M     + +  TY+ L+ G  +  ++  A ++  E+   G+   
Sbjct: 415 FCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           I+TY  +L G+C  G + EA  +L +M     +LD   +NIII+  C   KV++A  L  
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFC 534

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +   G    DI SY  +L G+C    + EA    +KM  +G  P+  T+N L+R+
Sbjct: 535 SLPSKG-VKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRA 589



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 263/531 (49%), Gaps = 9/531 (1%)

Query: 39  SYRRVGLAEQALKMFYRIREF-GLKPTVKI--YNHILDALLAENRFSMINPIYSNMKRDG 95
           + R     +   + F+ ++ F GL    K+  Y   L + L + +      ++ +M R  
Sbjct: 26  TLRNAAFFQSPYEFFFCVQGFSGLTSDRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSR 85

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KLGQVE 152
             P V  +N L   L +  + D    L  +M  KG A D  +   +++  C   KLG   
Sbjct: 86  PLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAF 145

Query: 153 EARELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            A     + G       +N L+NGLC E ++ EA  L+  MV     P++IT +TI++ L
Sbjct: 146 SAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGL 205

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    V  ++ ++ +M   GC PN  ++  +L      G T  A DL  +M      P+V
Sbjct: 206 CLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHV 265

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ +I  LC +G +D+A+S   +ME      NV TY++LI  F   G     +Q+   
Sbjct: 266 VTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRD 325

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           MI+   +PNVV ++ ++  L +     +A  L  +M      PNT+T+N+ I GLC   R
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A +++D M    C P+I TYN L++G  +  +V +   L  ++   G+  + VTY+T
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G C++  ++ A ++  +M+ +G     +T+ I++   C  G++  A+ +LD++    
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC- 504

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   DI  Y  ++ G+CN+  + +A+     + ++G+  +  ++N+++  L
Sbjct: 505 KMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGL 555



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 210/397 (52%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L   L +  + +    L  +M  +GI  ++ T + +I+  C    +  +   +G++F
Sbjct: 93  FNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF 152

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  PN  +F +LL G  L GR  EA +L + M+    +P+++  +T+++GLC    + 
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVS 212

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV +  +M  N C PN  TY  +++   K+GN   A  +  +M      P+VV YT ++
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC++     A S   +M  +    N  T+N+ I   C  GR D   +LL  M   +  
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T++ L+D L++  ++ EA +L  E+   GI+ N +TYN++++G+C    + EA Q+
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           +  M+ +G   D  T+NI+I  +CK  +V++ ++L  ++   G    D ++Y++L+ G C
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMI-ADTVTYSTLIQGFC 451

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            S  +  A    Q+M+++G+ P   T+ +L+  L  N
Sbjct: 452 QSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 182/355 (51%), Gaps = 5/355 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D       +M+ +G+  +   + S+I S+   G  +   ++   +    
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D+L+ E + +    +Y+ M   G+EPN  TYN L+  LC + R+D A 
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           +++  M +KGC PD  +Y  +++  CK  QV++     R++++R   +    Y+ LI G 
Sbjct: 391 QMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGF 450

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  +  EMV +G+ P ++TY+ ++  LCD G +E +LGIL QM       +I
Sbjct: 451 CQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDI 510

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A  L+  +  +G   ++ +Y+ ++ GLC   S+ EA ++  +
Sbjct: 511 GIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRK 570

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           M+E+   P+  TY+ LI    +  ++  + Q+   M   G S +      ++ +L
Sbjct: 571 MKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 273/553 (49%), Gaps = 41/553 (7%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           +GVS    +F + IN++ + G  E+A+K+F ++ E G+ P V  +N ++D L    R+  
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                  M   GMEP + TY+IL+K L +  R+  AY +L EM  KG  P+ + Y  ++ 
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 386

Query: 144 SICKLGQVEEARELA-MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S  + G + +A E+  +    G+S+    YN LI G CK  + + A  LL EM+  G + 
Sbjct: 387 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 446

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  +++++I  LC     +++L  +G+M +R  +P     T+L+ G    G+  +A +LW
Sbjct: 447 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 506

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV--------------SVSY---------- 294
            + + +GF+ +    + L+HGLC  G +DEA                VSY          
Sbjct: 507 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 566

Query: 295 -----------QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
                      +M +    P+  TYS LI G      +  A Q W+    NG  P+V  Y
Sbjct: 567 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 626

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           + M+   C+     +     ++M  +N  PNTV +N  I+  C  GR+  A++L + MK 
Sbjct: 627 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 686

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN  TY  L+ G+  ++RV+EA  L  E+   G++ N+  Y  ++ G  + G +V+
Sbjct: 687 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 746

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
              LL +M  +    + IT+ ++I  Y + G V  A +LL+ +R  G   PD I+Y   +
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFI 805

Query: 524 WGICNSGGMQEAF 536
           +G    GG+ EAF
Sbjct: 806 YGYLKQGGVLEAF 818



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 278/538 (51%), Gaps = 8/538 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           AL +F  +   G+ P+    N +L +L+  N F      +  + + G+ P+V+ +   + 
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 281

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGV 165
           A CK  +V+ A KL  +M   G AP+ V++ T++  +   G+ +EA   +E  +  G   
Sbjct: 282 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 341

Query: 166 SV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           ++  Y+ L+ GL +  +I +A+++L EM  +G  PNVI Y+ +I S  + G++  ++ I 
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +G +    ++ +L+KGY   G+   A  L   M+  GF  N  +++++I  LCS+
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 461

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
              D A+    +M   +  P     + LI G  K G    A ++W + ++ G   +    
Sbjct: 462 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 521

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+     +A  + +++    C  + V++NT I G CG  ++D A   LD+M +
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY+ L+ GL  +N+V+EA +   + ++ G+  ++ TY+ ++ G C+A    E
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +   +M+ +  + + + +N +I AYC+ G+++ A++L + ++  G  +P+  +YTSL+
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLI 700

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G+     ++EA +  ++M  EG+ PN   +  L+   +  LG +  V  L   M +K
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG-YGKLGQMVKVECLLREMHSK 757



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 237/485 (48%), Gaps = 9/485 (1%)

Query: 104 NILLKALCKNNRVDGAY---KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           ++L++  C   + DG Y    +   + NKG  P   +   +++S+ +  + ++  E    
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 264

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GVS    ++   IN  CK  K+EEA  L  +M + G+ PNV+T++T+I  L   G  
Sbjct: 265 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 324

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +     +M  RG  P + +++ L+KG     R  +A  +   M ++GF PNV+ Y+ L
Sbjct: 325 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 384

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I      GS+++A+ +   M         +TY+ LI G+ K G    A ++   M+S G 
Sbjct: 385 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 444

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N  ++T ++ +LC + MF  A   + +M   N  P      T I GLC  G+   A++
Sbjct: 445 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 504

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  Q      + +  T N LL GL    ++ EAF +  EI   G  ++ V+YNT++ G C
Sbjct: 505 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 564

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               + EAF  L +M+  G K D  T++I+I       KV  AIQ  D  +  G   PD+
Sbjct: 565 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDV 623

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +Y+ ++ G C +   +E   +  +M+++ + PN   +N L+R+ +   G L     L +
Sbjct: 624 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA-YCRSGRLSMALELRE 682

Query: 577 IMANK 581
            M +K
Sbjct: 683 DMKHK 687



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 216/475 (45%), Gaps = 43/475 (9%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + +  +   +R+G A   LK    + + G  P V +YN+++D+ +     +    I   M
Sbjct: 348 ILVKGLTRAKRIGDAYFVLK---EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--------------------- 130
              G+     TYN L+K  CKN + D A +LL EM + G                     
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464

Query: 131 --------------CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNAL 171
                          +P     TT++S +CK G+  +A EL  +F   G  V     NAL
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GLC+  K++EAF +  E++ RG   + ++Y+T+IS  C    ++ +   L +M  RG 
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+ ++++ L+ G     +  EA   W+   R G LP+V  YS +I G C     +E   
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +M   +  PN   Y+ LI  + ++G L  A ++   M   G SPN   YT ++K + 
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
             +   +A  L E+M  E   PN   +   I G    G++     LL +M      PN  
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           TY  ++ G  R   V EA  L+ E+ + GI  + +TY   ++G  + G V+EAF+
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D     + +M +  +S   G+  ++I+   + G   +AL+++++    G     +  N 
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 523

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L    +      I   +   G   +  +YN L+   C   ++D A+  L EM  +G
Sbjct: 524 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 583

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAF 185
             PD  +Y+ ++  +  + +VEEA +      R G    V  Y+ +I+G CK  + EE  
Sbjct: 584 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 643

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               EM+ + + PN + Y+ +I + C  G +  +L +   M  +G +PN  ++TSL+KG 
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            +  R  EA  L+  M  EG  PNV  Y+ LI G    G M +   +  +M   +  PN 
Sbjct: 704 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 763

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            TY+ +I G+A+ GN+  AS++ N M   G  P+ + Y
Sbjct: 764 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 40/310 (12%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++D     L +M   G+      +  +I     +   E+A++ +   +  G+ P V  
Sbjct: 566 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 625

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ ++D      R       +  M    ++PN   YN L++A C++ R+  A +L  +M 
Sbjct: 626 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 685

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           +KG +P++ +YT+++  +  + +VEEA+                               L
Sbjct: 686 HKGISPNSATYTSLIKGMSIISRVEEAK------------------------------LL 715

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM   G++PNV  Y+ +I     +G +     +L +M  +  +PN  ++T ++ GY  
Sbjct: 716 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 775

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   EAS L N M  +G +P+ + Y   I+G    G + EA   S   EEN        
Sbjct: 776 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD--EEN-------- 825

Query: 308 YSALIDGFAK 317
           Y+A+I+G+ K
Sbjct: 826 YAAIIEGWNK 835


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 267/506 (52%), Gaps = 6/506 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+  F R+      P +  +N ILD+      +S    +   ++  G++P++ T NIL
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           +   C   ++   + +L ++  +G  PD V+  T++  +C  GQV++A     + LA  F
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y  LING+CK      A  LL ++  R   PNV  YSTII +LC    V  + G
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M V+G + ++ ++++L+ G+ + G+  EA  L N M+ +   PNV  Y+ L+  LC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA SV   M +    P+V TYS L+DG+     +  A  ++N M   G +P+V 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++   C+N M  +A +L ++M  +N  P  VT+++ I GLC  GR+ +   L+D+M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +      ++ TY+ L+DGL +   +  A  L  +++   I+ NI T+  +L G+C+ G +
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A ++   +L +G  L+  T+N++I  +CKQG +  A+ +L ++   G   P+  ++ +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG-CIPNAFTFET 519

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGI 547
           ++  +       +A   L++M+  G+
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 253/483 (52%), Gaps = 5/483 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++S+ ++     A+ + +R+   G++P +   N +++      + +    + + + 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G  P+  T N L+K LC   +V  A     ++  +G   + VSY T+++ +CK+G   
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 153 EARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L  +         V +Y+ +I+ LCK   + EA+ L  EM  +GI  +V+TYST+I
Sbjct: 182 GAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLI 241

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C  G ++ ++G+L +M ++  NPN++++  L+      G+  EA  +   M++    
Sbjct: 242 YGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+V+ YSTL+ G      + +A  V   M      P+V TY+ LI+GF K   +  A  +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      P +V Y+ ++  LC++        LI++M     P + +T+++ I GLC 
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G +D A+ L ++MK  E  PNI T+  LLDGL +  R+K+A E+  ++   G  LN+ T
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN +++G C+ G++ EA  +L KM   G   +A TF  II A  K+ + + A +LL ++ 
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 541

Query: 508 GGG 510
             G
Sbjct: 542 ARG 544



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 234/464 (50%), Gaps = 5/464 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +++++G+         +IN +  +G       +  +I + G  P     N ++  L 
Sbjct: 81  LSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC 140

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +       +  +   G + N  +Y  L+  +CK     GA KLL ++  +   P+  
Sbjct: 141 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE 200

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+TI+ ++CK   V EA     E+ ++   + V  Y+ LI G C E K++EA  LL EM
Sbjct: 201 MYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEM 260

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V + I+PNV TY+ ++ +LC  G V+ +  +L  M      P++ ++++L+ GY L    
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++N M   G  P+V  Y+ LI+G C N  +DEA+++  +M + +  P + TYS+L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +     + + M   G   +V+ Y+ ++  LC+N    +A +L  KM  +  
Sbjct: 381 IDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  TF   + GLC  GR+  A ++   +       N+ TYN +++G  +   ++EA  
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++++E  G   N  T+ TI+  + +     +A +LL +M+  G
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 207/407 (50%), Gaps = 1/407 (0%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R L MR    +  +N +++   K      A  L   +  +GI P++IT + +I+  C +G
Sbjct: 49  RMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +     +L ++  RG  P+  +  +L+KG  L G+  +A    ++++ +GF  N V+Y+
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 168

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI+G+C  G    A+ +  +++     PNV  YS +ID   K   +  A  +++ M   
Sbjct: 169 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G S +VV Y+ ++   C      +A  L+ +M  +   PN  T+N  +  LC  G+V  A
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             +L  M +    P++ TY+ L+DG   V  VK+A  +   +   G+  ++ TY  +++G
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+  MV EA  L  +M  +      +T++ +I   CK G++     L+D +R  G+   
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQ-PA 407

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D+I+Y+SL+ G+C +G +  A     KM ++ I PN  T+ +L+  L
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 210/432 (48%), Gaps = 6/432 (1%)

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFW 186
            P  + +  I+ S  K+     A  L+ R    G+       N LIN  C   +I   F 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +L +++ RG  P+ +T +T+I  LC  G V+ +L    ++  +G   N  S+ +L+ G  
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T  A  L  ++      PNV  YST+I  LC    + EA  +  +M       +V 
Sbjct: 176 KIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TYS LI GF   G L  A  + N M+    +PNV  Y  +V  LC+     +A S++  M
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 P+ +T++T + G      V  A  + + M      P++ TY  L++G  +   V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA  L  E+ +  +   IVTY++++ G+C++G +   + L+ +M   G   D IT++ +
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSL 415

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I   CK G ++ AI L ++++   E  P+I ++T LL G+C  G +++A    Q +L +G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQ-EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 547 ICPNFATWNVLV 558
              N  T+NV++
Sbjct: 475 YHLNVYTYNVMI 486



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 209/406 (51%), Gaps = 5/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++    +   ++  +G   ++  + ++IN   ++G    A+K+  +I    
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 194

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V++Y+ I+DAL      S    ++S M   G+  +V TY+ L+   C   ++  A 
Sbjct: 195 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAI 254

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM  K   P+  +Y  +V ++CK G+V+EA+  LA+   + V      Y+ L++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
              +++++A  +   M   G+ P+V TY+ +I+  C    V+ +L +  +M  +   P I
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    GR     DL + M   G   +V+ YS+LI GLC NG +D A+++  +
Sbjct: 375 VTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNK 434

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++    PN+ T++ L+DG  K G L  A +++  +++ G   NV  Y  M+   C+  +
Sbjct: 435 MKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGL 494

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             +A +++ KM    C PN  TF T I  L      D A KLL QM
Sbjct: 495 LEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 197/384 (51%), Gaps = 2/384 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P +I ++ I+ S   + +  T++ +  ++ ++G  P++ +   L+  +   G+      +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             ++++ G+ P+ V  +TLI GLC  G + +A+    ++       N  +Y+ LI+G  K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G+  GA ++  ++      PNV  Y+ ++  LC+  +  +A+ L  +M  +    + VT
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++T I G C  G++  A+ LL++M      PN+ TYN L+D L +  +VKEA  ++  + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K  ++ +++TY+T++ G      V +A  +   M + G   D  T+ I+I  +CK   V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+ L   +       P I++Y+SL+ G+C SG +   +  + +M + G   +  T++ L
Sbjct: 357 EALNLFKEMHQKN-MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSL 415

Query: 558 VRSLFSNLGHLGPVYILDDIMANK 581
           +  L  N GHL     L + M ++
Sbjct: 416 IDGLCKN-GHLDRAIALFNKMKDQ 438



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 146/278 (52%), Gaps = 1/278 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++D+AVS   +M      P +  ++ ++D FAK  +   A  + +R+   G  P+++   
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C         S++ K+     PP+TVT NT IKGLC  G+V  A+   D++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               N  +Y  L++G+ ++   + A +L+ +I+    + N+  Y+TI+  +C+  +V EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           + L  +M ++G   D +T++ +IY +C +GK+  AI LL+ +      NP++ +Y  L+ 
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV-LKTINPNVYTYNILVD 277

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +C  G ++EA   L  ML   + P+  T++ L+   F
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   Q++   M + GV+     +  +IN + +  + ++AL +F  + +  + P +  Y+
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R   +  +   M+  G   +V TY+ L+  LCKN  +D A  L  +M ++
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
              P+  ++T ++  +CK G++++A+E     L   +   V  YN +ING CK+  +EEA
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             +L +M D G  PN  T+ TII +L      + +  +L QM  RG
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 119/240 (49%), Gaps = 5/240 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + ++++ Y  V   ++A  +F  +   G+ P V  Y  +++             ++  M 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           +  M P + TY+ L+  LCK+ R+   + L+ EM ++G   D ++Y++++  +CK G ++
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 153 EARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  L  +         +  +  L++GLCK  ++++A  +  +++ +G   NV TY+ +I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C  G +E +L +L +M   GC PN  +F +++          +A  L  +MI  G L
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 40.0 bits (92), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 35/165 (21%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I  V  L+ +M+  G       + S+I+   + G  ++A+ +F ++++  
Sbjct: 380 LIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 61  LKPTVKIYNHILDALLAENRFS-----------------------MIN------------ 85
           ++P +  +  +LD L    R                         MIN            
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            + S M+ +G  PN FT+  ++ AL K +  D A KLL +M  +G
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 271/578 (46%), Gaps = 43/578 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ +M     S SE    S++   R+ G  E+AL +  R+ +FG+ P + +YN ++D+L 
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +F     ++  M + G+ PN  TY+IL+   C+  ++D A   L EM + G      
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438

Query: 137 SYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y ++++  CK G +  A          +    V  Y +L+ G C + KI +A  L  EM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +GI P++ T++T++S L   G +  ++ +  +M      PN  ++  +++GY   G  
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +    M  +G +P+  +Y  LIHGLC  G   EA      + + +C  N   Y+ L
Sbjct: 559 SKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGL 618

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCS---------------------------------- 337
           + GF + G L  A  +   M+  G                                    
Sbjct: 619 LHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678

Query: 338 -PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ V YT M+    +   F +A  + + M  E C PN VT+   I GLC  G V+ A  
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           L  +M+    +PN  TY   LD L +    +++A EL   I K G+  N  TYN ++ G 
Sbjct: 739 LCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGF 797

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CR G + EA +L+ +M+ +G   D IT+  +I   C++  V  AI+L + +   G   PD
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG-IRPD 856

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            ++Y +L+ G C +G M +A     +ML +G+ PN  T
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 256/527 (48%), Gaps = 9/527 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           +R  GLA   +++F  +   G++P V IY  ++ +L      S    + ++M+  G + N
Sbjct: 205 FRHFGLA---MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE--- 156
           +  YN+L+  LCK  +V  A  +  ++  K   PD V+Y T+V  +CK+ + E   E   
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321

Query: 157 --LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             L +RF    +  ++L+ GL K  KIEEA  L+  +VD G+ PN+  Y+ +I SLC   
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
               +  +  +M   G  PN  +++ L+  +   G+   A      M+  G   +V  Y+
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +LI+G C  G +  A     +M      P V TY++L+ G+   G +  A ++++ M   
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G +P++  +T ++  L +  +   A  L  +MA  N  PN VT+N  I+G C  G +  A
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            + L +M +   +P+  +Y  L+ GL    +  EA   V  + K   +LN + Y  +LHG
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            CR G + EA  +  +M+  G  LD + + ++I    K         LL  +   G   P
Sbjct: 622 FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG-LKP 680

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D + YTS++     +G  +EAF     M+NEG  PN  T+  ++  L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 235/467 (50%), Gaps = 8/467 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P V T + LL  L K      A +L  +M + G  PD   YT ++ S+C+L  +  A+E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 158 -AMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            A    +G  V    YN LI+GLCK+ K+ EA  +  ++  + + P+V+TY T++  LC 
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           V   E  L ++ +M     +P+  + +SL++G    G+  EA +L  R++  G  PN+  
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI  LC      EA  +  +M +    PN  TYS LID F + G L  A      M+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   +V  Y  ++   C+      A   + +M  +   P  VT+ + + G C  G+++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++L  +M      P+I T+  LL GL R   +++A +L  E+ +  ++ N VTYN ++
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGE 511
            G C  G + +AF+ L +M  +G   D  ++  +I+  C  G+ + A   +D + +G  E
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            N   I YT LL G C  G ++EA    Q+M+  G+  +   + VL+
Sbjct: 610 LNE--ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 260/543 (47%), Gaps = 6/543 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M   G+     ++  VI S   +    +A +M   +   G    +  YN ++D L 
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      I  ++    ++P+V TY  L+  LCK    +   +++ EM     +P   
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           + +++V  + K G++EEA  L  R    GVS    VYNALI+ LCK  K  EA  L   M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PN +TYS +I   C  G ++T+L  LG+M   G   +++ + SL+ G+   G  
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDI 453

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A      MI +   P VV Y++L+ G CS G +++A+ + ++M      P++ T++ L
Sbjct: 454 SAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +AG +  A +++N M      PN V Y  M++  C+     +A   +++M  +  
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+T ++   I GLC  G+   A   +D + +  C  N   Y  LL G  R  +++EA  
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALS 633

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  E+ + G+ L++V Y  ++ G  +       F LL +M   G K D + +  +I A  
Sbjct: 634 VCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKS 693

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G    A  + D +   G   P+ ++YT+++ G+C +G + EA +   KM      PN 
Sbjct: 694 KTGDFKEAFGIWDLMINEG-CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752

Query: 552 ATW 554
            T+
Sbjct: 753 VTY 755



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 207/443 (46%), Gaps = 40/443 (9%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   +  + +M  + +  +   + S++  Y   G   +AL++++ +   G+ P++  + 
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFT 511

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L           +++ M    ++PN  TYN++++  C+   +  A++ L EM  K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEA 184
           G  PD  SY  ++  +C  GQ  EA+        G        Y  L++G C+E K+EEA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EMV RG+D +++ Y  +I       + +   G+L +M  RG  P+   +TS++  
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDA 691

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   EA  +W+ MI EG +PN V Y+ +I+GLC  G ++EA  +  +M+  S  PN
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPN 751

Query: 305 -----------------------------------VTTYSALIDGFAKAGNLLGASQIWN 329
                                                TY+ LI GF + G +  AS++  
Sbjct: 752 QVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELIT 811

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RMI +G SP+ + YT M+  LC+ N   +A  L   M  +   P+ V +NT I G C  G
Sbjct: 812 RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871

Query: 390 RVDWAMKLLDQMKQYECLPNITT 412
            +  A +L ++M +   +PN  T
Sbjct: 872 EMGKATELRNEMLRQGLIPNNKT 894



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 188/417 (45%), Gaps = 48/417 (11%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K +I+    L  +M  +G++ S   F ++++   R GL   A+K+F  + E+ +KP    
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN +++    E   S        M   G+ P+ ++Y  L+  LC   +   A K+ V+  
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGL 603

Query: 128 NKG-CAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV----YNALINGLCKE 178
           +KG C  + + YT ++   C+ G++EEA    +E+  R   GV +    Y  LI+G  K 
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR---GVDLDLVCYGVLIDGSLKH 660

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              +  F LL EM DRG+ P+ + Y+++I +    G+ + + GI   M   GC PN  ++
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720

Query: 239 TSLLKGYLLGGRTHEASDLWNRM-----------------------------------IR 263
           T+++ G    G  +EA  L ++M                                   I 
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G L N   Y+ LI G C  G ++EA  +  +M  +   P+  TY+ +I+   +  ++  
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           A ++WN M   G  P+ VAY  ++   C      +A  L  +M  +   PN  T  T
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 37/361 (10%)

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           F  L++ Y+   R  +   ++  MI +   LP V   S L+HGL        A+ +   M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
                 P+V  Y+ +I    +  +L  A ++   M + GC  N+V Y  ++  LC+    
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC---------------------------- 388
            +A  + + +A ++  P+ VT+ T + GLC                              
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 389 -------GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
                  G+++ A+ L+ ++  +   PN+  YN L+D L +  +  EA  L   + K G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N VTY+ ++   CR G +  A   LG+M+  G KL    +N +I  +CK G ++ A  
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +  +    +  P +++YTSL+ G C+ G + +A     +M  +GI P+  T+  L+  L
Sbjct: 459 FMAEMI-NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517

Query: 562 F 562
           F
Sbjct: 518 F 518



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 7/192 (3%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           EG   +E  + +VIN   + G   +A  +  +++     P    Y   LD +L +    M
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD-ILTKGEVDM 769

Query: 84  INPI-YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
              +   N    G+  N  TYN+L++  C+  R++ A +L+  M   G +PD ++YTT++
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829

Query: 143 SSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           + +C+   V++A EL       G+      YN LI+G C   ++ +A  L  EM+ +G+ 
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889

Query: 198 PNVITYSTIISS 209
           PN  T  T  S+
Sbjct: 890 PNNKTSRTTTSN 901


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/489 (31%), Positives = 265/489 (54%), Gaps = 11/489 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  +N IL +L+  N F +       M+  G++P +FT+NIL+       +++ A+ +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
           + ++   G  PD V+  T++  +C  G+V+EA       +  RF      Y  LINGLCK
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 178 EHKIEEAFWLLCEMVDRG---IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             +   A  LL ++   G   + P+VI Y+ II S C    V  +  +  +M V+   PN
Sbjct: 171 SGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPN 228

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +F SL+ G+ + G+  EA  L N M      PNV  ++ LI GLC  G + +A SV  
Sbjct: 229 VVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLS 288

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M +    PNV TY++L+DG+     +  A  ++N +   G +PNV +Y+ M+  LC+N 
Sbjct: 289 VMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNK 348

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A  L ++M  +N  PNTVT+++ I GLC  GR+     L+D++       NI TYN
Sbjct: 349 MVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYN 408

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LL+GL + ++V +A  L+T+++  GIQ ++ TY T++ G+C+ G + +A ++   +L +
Sbjct: 409 SLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G  L+   + ++I   CK+G  + A+ LL ++   G   PD ++Y +L+  +  +    +
Sbjct: 469 GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG-CMPDAVTYETLISALFKNNKNGK 527

Query: 535 AFIYLQKML 543
           A   L++M+
Sbjct: 528 AVKLLREMI 536



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 234/462 (50%), Gaps = 10/462 (2%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           QQM+++G+      F  +IN +  +     A  M  +I + G +P     N +L  L   
Sbjct: 77  QQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLN 136

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVS 137
            +       + ++ R     +  +Y  L+  LCK+     A +LL ++ G     PD + 
Sbjct: 137 GKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIM 196

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           YT I+ S CK   V +A +L       +    V  +N+LI G C   +++EA  LL EM 
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
              ++PNV T++ +I  LC  G V+ +  +L  M  +G  PN+ ++TSL+ GY L    +
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  ++N +   G  PNV +YS +I+GLC N  +DEAV +  +M   +  PN  TYS+LI
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DG  K+G +     + + + + G   N++ Y  ++  LC+N+   +A +L+ KM  E   
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNITTYNELLDGLLRVNRVKEAF 430
           P+  T+ T + GLC  GR+  A ++   +  K Y    NI  Y  +++GL +     EA 
Sbjct: 437 PDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPL--NIRMYTVMINGLCKEGFFDEAL 494

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
            L++++E  G   + VTY T++  + +     +A +LL +M+
Sbjct: 495 SLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 536



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 211/398 (53%), Gaps = 2/398 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N +++ L K +  + A     +M  +GI P + T++ +I+    +  +  +  ++ ++ 
Sbjct: 56  FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +  +LL+G  L G+  EA +  + +IR+ F  + V+Y TLI+GLC +G   
Sbjct: 116 KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETR 175

Query: 288 EAVSVSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            A+ +  ++E      P+V  Y+A+ID F K   ++ A  +++ MI     PNVV +  +
Sbjct: 176 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSL 235

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C      +A  L+ +M+  N  PN  TFN  I GLC  G V  A  +L  M +   
Sbjct: 236 IYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV 295

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+ TY  L+DG   V  V +A  +   I   G+  N+ +Y+ +++G+C+  MV EA +
Sbjct: 296 EPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVK 355

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M ++    + +T++ +I   CK G++++   L+D I   G+   +II+Y SLL G+
Sbjct: 356 LFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQP-ANIITYNSLLNGL 414

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           C +  + +A   L KM +EGI P+ +T+  LV  L  N
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKN 452



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 177/332 (53%), Gaps = 6/332 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K  ID    L  +M V+ +  +   F S+I  +  VG  ++A+ +   +    + P V 
Sbjct: 207 DKLVIDAYD-LYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVY 265

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +N ++D L  E        + S M + G+EPNV TY  L+        V+ A  +   +
Sbjct: 266 TFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI 325

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHKI 181
             +G  P+  SY+ +++ +CK   V+EA    +E+ ++  +  +V Y++LI+GLCK  +I
Sbjct: 326 SLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRI 385

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            + + L+ E+ +RG   N+ITY+++++ LC    V+ ++ +L +M   G  P++ ++T+L
Sbjct: 386 SDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTL 445

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    GR  +A  ++  ++ +G+  N+  Y+ +I+GLC  G  DEA+S+  QME+N C
Sbjct: 446 VDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGC 505

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
            P+  TY  LI    K      A ++   MI+
Sbjct: 506 MPDAVTYETLISALFKNNKNGKAVKLLREMIA 537



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 121/225 (53%), Gaps = 5/225 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  +++   + + GV+ +   +  +IN   +  + ++A+K+F  +    + P    Y+
Sbjct: 314 EVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYS 373

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S +  +   +   G   N+ TYN LL  LCKN++VD A  LL +M ++
Sbjct: 374 SLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDE 433

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +YTT+V  +CK G++++A+      L   +   + +Y  +INGLCKE   +EA
Sbjct: 434 GIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEA 493

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
             LL +M D G  P+ +TY T+IS+L        ++ +L +M  R
Sbjct: 494 LSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 146/283 (51%), Gaps = 9/283 (3%)

Query: 285 SMDEAVS-VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           ++D+AVS  ++ +  N+  P +  ++ ++    K  +   A     +M   G  P +  +
Sbjct: 32  NLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTF 91

Query: 344 TCMVKV---LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             ++     LCQ N    A S++ K+      P+TVT NT ++GLC  G+V  A+   D 
Sbjct: 92  NILINCFSHLCQLNF---AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDH 148

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK-CGIQLNIVTYNTILHGVCRAG 459
           + +     +  +Y  L++GL +    + A +L+ +IE    ++ +++ Y  I+   C+  
Sbjct: 149 VIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDK 208

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
           +V++A+ L  +M+++    + +TFN +IY +C  G++  A+ LL+ +      NP++ ++
Sbjct: 209 LVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM-SLNNVNPNVYTF 267

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             L+ G+C  G +++A   L  M+ +G+ PN  T+  L+   F
Sbjct: 268 NILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYF 310



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 133/267 (49%), Gaps = 5/267 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ E+     +L  M  +GV  +   + S+++ Y  V    +A  +F  I   G
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ +++ L           ++  M    M PN  TY+ L+  LCK+ R+   +
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVW 389

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L+ E+ N+G   + ++Y ++++ +CK  QV++A  L  +         +S Y  L++GL
Sbjct: 390 DLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGL 449

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A  +  +++ +G   N+  Y+ +I+ LC  G  + +L +L QM   GC P+ 
Sbjct: 450 CKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDA 509

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI 262
            ++ +L+       +  +A  L   MI
Sbjct: 510 VTYETLISALFKNNKNGKAVKLLREMI 536


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 268/510 (52%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  +    + LLK  C+  R D A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY  ++ S+C  G+  +A +L      G       V  YN +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  KE  + +A  L  EMV RGI P+++TYS+++ +LC    ++ +   L QM  +G  
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  ++ +L+ GY   G+  EA  ++  M R+  LP+VVA +TL+  LC  G + EA  V
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P+V +Y+ +++G+A  G L+  + +++ M+ +G +P++  +  ++K    
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      P+ VT+ T I  LC  G++D AM+  +QM     +P+   
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+ G      + +A EL++EI   G++L+IV + +I++ +C+ G V++A  +    +
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   DA+ +N+++  YC  GK+  A+++ D +   G   P+++ Y +L+ G C  G +
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNVVGYGTLVNGYCKIGRI 587

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML +GI P+   +N+++  LF
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLF 617



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 268/559 (47%), Gaps = 16/559 (2%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALK-MFYRIREFGLKPTVKIYNHILD 73
           Q L   ++V+ +  S      ++  +      ++AL  + +R  E G  P V  YN +L 
Sbjct: 138 QLLRTGLRVDAIIASH-----LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLK 192

Query: 74  ALLAENRFSMINPIYSNMKRDGM--EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +L  + +    + +   M   G    P+V  YN ++    K   V+ A  L  EM  +G 
Sbjct: 193 SLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 252

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            PD V+Y+++V ++CK   +++A   L      GV      YN LI G     + +EA  
Sbjct: 253 PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +  EM  + I P+V+  +T++ SLC  G ++ +  +   M ++G NP++ S+T +L GY 
Sbjct: 313 VFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYA 372

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G   + +DL++ M+ +G  P++  ++ LI    + G +D+A+ +  +M ++   P+V 
Sbjct: 373 TKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVV 432

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY  +I    + G +  A + +N+MI  G  P+  AY C+++  C +    +A  LI ++
Sbjct: 433 TYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI 492

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  + V F + I  LC  GRV  A  + D        P+   YN L+DG   V ++
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           ++A  +   +   GI+ N+V Y T+++G C+ G + E   L  +ML +G K   I +NII
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612

Query: 487 IYAYCKQGK-VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           I    + G+ V   ++  +    G   N    +Y+ +L G+  +    EA    +++   
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNK--CTYSIVLRGLFKNRCFDEAIFLFKELRAM 670

Query: 546 GICPNFATWNVLVRSLFSN 564
            +  +  T N ++  +F  
Sbjct: 671 NVKIDIITLNTMIAGMFQT 689



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 262/555 (47%), Gaps = 8/555 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P +  Y+ ++ A
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L               M   G+ P+ +TYN L+       +   A ++  EM  +   PD
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 135 AVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+  T++ S+CK G+++EAR+    +AM+     V  Y  ++NG   +  + +   L  
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M+  GI P++ T++ +I +  + G ++ ++ I  +M   G  P++ ++ +++      G
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A + +N+MI +G +P+  AY  LI G C++GS+ +A  +  ++  N    ++  + 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+   K G ++ A  I++  ++ G  P+ V Y  ++   C      +A  + + M   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN V + T + G C  GR+D  + L  +M Q    P+   YN ++DGL    R   A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                E+ + GI +N  TY+ +L G+ +     EA  L  ++     K+D IT N +I  
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +V  A  L   I   G   P  ++Y+ ++  +   G ++EA      M N G  P
Sbjct: 686 MFQTRRVEEAKDLFASISRSG-LVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEP 744

Query: 550 NFATWNVLVRSLFSN 564
           +    N +VR L   
Sbjct: 745 DSRLLNHVVRELLKK 759



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 258/533 (48%), Gaps = 40/533 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  +  L+QM  +GV      + ++I  Y   G  ++A+++F  +R   + P V   N 
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331

Query: 71  ILDALL-------AENRFSMI-----NP-----------------------IYSNMKRDG 95
           ++ +L        A + F  +     NP                       ++  M  DG
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+++T+N+L+KA      +D A  +  EM + G  P  V+Y T+++++C++G++++A 
Sbjct: 392 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451

Query: 156 E-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E        GV      Y+ LI G C    + +A  L+ E+++ G+  +++ + +II++L
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C +G V  +  I       G +P+   +  L+ GY L G+  +A  +++ M+  G  PNV
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y TL++G C  G +DE +S+  +M +    P+   Y+ +IDG  +AG  + A   ++ 
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  +G + N   Y+ +++ L +N  F +A  L +++   N   + +T NT I G+    R
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V+ A  L   + +   +P   TY+ ++  LL+   V+EA ++ + ++  G + +    N 
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  + +   +V A   L K+      L+ +T  +++  +  +G     I+ L
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 196/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   +    + LLKG+    RT E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +Y+ L+  LC+ G   +A  +   M E    C P+V  Y+ 
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G++  A  ++  M+  G  P++V Y+ +V  LC+     +A + + +M  + 
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+  T+N  I G    G+   A+++  +M++   LP++   N L+  L +  ++KEA 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   ++ +Y  +L+G    G +V+   L   ML +G   D  TFN++I AY
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 406

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   P +++Y +++  +C  G M +A     +M+++G+ P+
Sbjct: 407 ANCGMLDKAMIIFNEMRDHG-VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              ++ L++   ++   L    ++ +IM N
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNN 495



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 144/327 (44%), Gaps = 5/327 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV   +  +  +I  +   G   +A ++   I   G++  +  + 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G+ P+   YN+L+   C   +++ A ++   M + 
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  +       +YN +I+GL +  +   A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  N  TYS ++  L      + ++ +  ++       +I +  +++ G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+  + R G +P  V YS +I  L   G ++EA  +   M+   C P+
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM 331
               + ++    K   ++ A    +++
Sbjct: 746 SRLLNHVVRELLKKNEIVRAGAYLSKI 772


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/553 (29%), Positives = 273/553 (49%), Gaps = 41/553 (7%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           +GVS    +F + IN++ + G  E+A+K+F ++ E G+ P V  +N ++D L    R+  
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                  M   GMEP + TY+IL+K L +  R+  AY +L EM  KG  P+ + Y  ++ 
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 362

Query: 144 SICKLGQVEEARELA-MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S  + G + +A E+  +    G+S+    YN LI G CK  + + A  LL EM+  G + 
Sbjct: 363 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 422

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  +++++I  LC     +++L  +G+M +R  +P     T+L+ G    G+  +A +LW
Sbjct: 423 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 482

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV--------------SVSY---------- 294
            + + +GF+ +    + L+HGLC  G +DEA                VSY          
Sbjct: 483 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 542

Query: 295 -----------QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
                      +M +    P+  TYS LI G      +  A Q W+    NG  P+V  Y
Sbjct: 543 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 602

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           + M+   C+     +     ++M  +N  PNTV +N  I+  C  GR+  A++L + MK 
Sbjct: 603 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 662

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN  TY  L+ G+  ++RV+EA  L  E+   G++ N+  Y  ++ G  + G +V+
Sbjct: 663 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 722

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
              LL +M  +    + IT+ ++I  Y + G V  A +LL+ +R  G   PD I+Y   +
Sbjct: 723 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG-IVPDSITYKEFI 781

Query: 524 WGICNSGGMQEAF 536
           +G    GG+ EAF
Sbjct: 782 YGYLKQGGVLEAF 794



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 278/538 (51%), Gaps = 8/538 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           AL +F  +   G+ P+    N +L +L+  N F      +  + + G+ P+V+ +   + 
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 257

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGV 165
           A CK  +V+ A KL  +M   G AP+ V++ T++  +   G+ +EA   +E  +  G   
Sbjct: 258 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 317

Query: 166 SV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           ++  Y+ L+ GL +  +I +A+++L EM  +G  PNVI Y+ +I S  + G++  ++ I 
Sbjct: 318 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 377

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +G +    ++ +L+KGY   G+   A  L   M+  GF  N  +++++I  LCS+
Sbjct: 378 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 437

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
              D A+    +M   +  P     + LI G  K G    A ++W + ++ G   +    
Sbjct: 438 LMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS 497

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+     +A  + +++    C  + V++NT I G CG  ++D A   LD+M +
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 557

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY+ L+ GL  +N+V+EA +   + ++ G+  ++ TY+ ++ G C+A    E
Sbjct: 558 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 617

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +   +M+ +  + + + +N +I AYC+ G+++ A++L + ++  G  +P+  +YTSL+
Sbjct: 618 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLI 676

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G+     ++EA +  ++M  EG+ PN   +  L+   +  LG +  V  L   M +K
Sbjct: 677 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG-YGKLGQMVKVECLLREMHSK 733



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 237/485 (48%), Gaps = 9/485 (1%)

Query: 104 NILLKALCKNNRVDGAY---KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           ++L++  C   + DG Y    +   + NKG  P   +   +++S+ +  + ++  E    
Sbjct: 181 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 240

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GVS    ++   IN  CK  K+EEA  L  +M + G+ PNV+T++T+I  L   G  
Sbjct: 241 VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY 300

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +     +M  RG  P + +++ L+KG     R  +A  +   M ++GF PNV+ Y+ L
Sbjct: 301 DEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNL 360

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I      GS+++A+ +   M         +TY+ LI G+ K G    A ++   M+S G 
Sbjct: 361 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 420

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N  ++T ++ +LC + MF  A   + +M   N  P      T I GLC  G+   A++
Sbjct: 421 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 480

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  Q      + +  T N LL GL    ++ EAF +  EI   G  ++ V+YNT++ G C
Sbjct: 481 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 540

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               + EAF  L +M+  G K D  T++I+I       KV  AIQ  D  +  G   PD+
Sbjct: 541 GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML-PDV 599

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +Y+ ++ G C +   +E   +  +M+++ + PN   +N L+R+ +   G L     L +
Sbjct: 600 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA-YCRSGRLSMALELRE 658

Query: 577 IMANK 581
            M +K
Sbjct: 659 DMKHK 663



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 216/475 (45%), Gaps = 43/475 (9%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + +  +   +R+G A   LK    + + G  P V +YN+++D+ +     +    I   M
Sbjct: 324 ILVKGLTRAKRIGDAYFVLK---EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 380

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--------------------- 130
              G+     TYN L+K  CKN + D A +LL EM + G                     
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 440

Query: 131 --------------CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNAL 171
                          +P     TT++S +CK G+  +A EL  +F   G  V     NAL
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++GLC+  K++EAF +  E++ RG   + ++Y+T+IS  C    ++ +   L +M  RG 
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+ ++++ L+ G     +  EA   W+   R G LP+V  YS +I G C     +E   
Sbjct: 561 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 620

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +M   +  PN   Y+ LI  + ++G L  A ++   M   G SPN   YT ++K + 
Sbjct: 621 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 680

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
             +   +A  L E+M  E   PN   +   I G    G++     LL +M      PN  
Sbjct: 681 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 740

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           TY  ++ G  R   V EA  L+ E+ + GI  + +TY   ++G  + G V+EAF+
Sbjct: 741 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 5/338 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D     + +M +  +S   G+  ++I+   + G   +AL+++++    G     +  N 
Sbjct: 440 FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNA 499

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L    +      I   +   G   +  +YN L+   C   ++D A+  L EM  +G
Sbjct: 500 LLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG 559

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAF 185
             PD  +Y+ ++  +  + +VEEA +      R G    V  Y+ +I+G CK  + EE  
Sbjct: 560 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ 619

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               EM+ + + PN + Y+ +I + C  G +  +L +   M  +G +PN  ++TSL+KG 
Sbjct: 620 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 679

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            +  R  EA  L+  M  EG  PNV  Y+ LI G    G M +   +  +M   +  PN 
Sbjct: 680 SIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNK 739

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            TY+ +I G+A+ GN+  AS++ N M   G  P+ + Y
Sbjct: 740 ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 40/310 (12%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++D     L +M   G+      +  +I     +   E+A++ +   +  G+ P V  
Sbjct: 542 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 601

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ ++D      R       +  M    ++PN   YN L++A C++ R+  A +L  +M 
Sbjct: 602 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 661

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           +KG +P++ +YT+++  +  + +VEEA+                               L
Sbjct: 662 HKGISPNSATYTSLIKGMSIISRVEEAK------------------------------LL 691

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM   G++PNV  Y+ +I     +G +     +L +M  +  +PN  ++T ++ GY  
Sbjct: 692 FEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYAR 751

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   EAS L N M  +G +P+ + Y   I+G    G + EA   S   EEN        
Sbjct: 752 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD--EEN-------- 801

Query: 308 YSALIDGFAK 317
           Y+A+I+G+ K
Sbjct: 802 YAAIIEGWNK 811


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 262/514 (50%), Gaps = 31/514 (6%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  +      P++  ++     + +  +F+++      M+ +G+  N++T NI+
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +   C+  +   AY +L ++   G  PD  ++                            
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF---------------------------- 138

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
             N LINGLC E K+ EA  L+  MV+ G  PNV+TY++I++ +C  G+   +L +L +M
Sbjct: 139 --NTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM 196

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             R    ++ ++++++      G    A  L+  M  +G   ++V Y++L+ GLC  G  
Sbjct: 197 DERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKW 256

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           ++ V +   M      PNV T++ LID F K G L  A++++  MI+ G SPN + Y  +
Sbjct: 257 NDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSL 316

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C  N   +A+++++ M   NC P+ VTF + IKG C   RVD  MKL  ++ +   
Sbjct: 317 MDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGL 376

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           + N  TY+ L+ G  +  +++ A EL  E+   G+  +++TY  +L G+C  G + +A +
Sbjct: 377 VANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +   +      LD + + III   CK GKV +A  L   +   G   P++++YT ++ G+
Sbjct: 437 IFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKG-VKPNVMTYTVMISGL 495

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           C  G + EA I L+KM  +G  PN  T+N L+R+
Sbjct: 496 CKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 231/421 (54%), Gaps = 5/421 (1%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G EP+  T+N L+  LC  ++V  A  L+  M   GC P+ V+Y +IV+ ICK G    A
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +L  +       + V  Y+ +I+ LC++  I+ A  L  EM  +GI  +++TY++++  
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGG 249

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G     + +L  M  R   PN+ +F  L+  ++  G+  EA++L+  MI +G  PN
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            + Y++L+ G C    + EA ++   M  N+C P++ T+++LI G+ K   +    +++ 
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFR 369

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           ++   G   N V Y+ +V+  CQ+     A  L ++M      P+ +T+   + GLC  G
Sbjct: 370 KISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNG 429

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +++ A+++ + +++ +   +I  Y  +++G+ +  +V++A+ L   +   G++ N++TY 
Sbjct: 430 KLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYT 489

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G+C+ G + EA  LL KM  +G + +  T+N +I A+ + G +  + +L++ ++  
Sbjct: 490 VMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSC 549

Query: 510 G 510
           G
Sbjct: 550 G 550



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 235/463 (50%), Gaps = 7/463 (1%)

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSVY--NAL 171
           D A  L  EM      P  V ++   S +    Q     +   +    G   ++Y  N +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           IN  C+  K   A+ +L +++  G +P+  T++T+I+ LC    V  ++ ++ +M   GC
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN+ ++ S++ G    G T  A DL  +M       +V  YST+I  LC +G +D A+S
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +ME      ++ TY++L+ G  KAG      Q+   M S    PNV+ +  ++ V  
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A+ L ++M  +   PNT+T+N+ + G C   R+  A  +LD M +  C P+I 
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIV 346

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+  L+ G  +V RV E  +L  +I K G+  N VTY+ ++ G C++G +  A +L  +M
Sbjct: 347 TFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM 406

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +  G   D +T+ I++   C  GK+  A+++ + ++   + N DI+ YT ++ G+C  G 
Sbjct: 407 VSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMNLDIVMYTIIIEGMCKGGK 465

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +++A+     +  +G+ PN  T+ V++  L    G L    IL
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK-GSLSEANIL 507



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 246/474 (51%), Gaps = 5/474 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M++ G++ +      +IN + R      A  +  ++ + G +P    +N +++ L  E
Sbjct: 89  KKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 148

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           ++ S    + + M  +G +PNV TYN ++  +CK+     A  LL +M  +    D  +Y
Sbjct: 149 SKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY 208

Query: 139 TTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +TI+ S+C+ G ++ A    +E+  +   S +  YN+L+ GLCK  K  +   LL +M  
Sbjct: 209 STIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTS 268

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I PNVIT++ +I      G ++ +  +  +M  +G +PN  ++ SL+ GY +  R  E
Sbjct: 269 RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSE 328

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+++ + M+R    P++V +++LI G C    +DE + +  ++ +     N  TYS L+ 
Sbjct: 329 ANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF ++G L  A +++  M+S G  P+V+ Y  ++  LC N    +A  + E +       
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNL 448

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + V +   I+G+C  G+V+ A  L   +      PN+ TY  ++ GL +   + EA  L+
Sbjct: 449 DIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            ++E+ G + N  TYNT++    R G +  + +L+ +M   G   DA +  ++I
Sbjct: 509 RKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 562



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 209/402 (51%), Gaps = 1/402 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  EM+     P+++ +S   S +         L    +M + G   NI++  
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +T  A  +  ++++ G+ P+   ++TLI+GLC    + EAV +  +M EN
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C PNV TY+++++G  K+G+   A  +  +M       +V  Y+ ++  LC++     A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL ++M  +    + VT+N+ + GLC  G+ +  ++LL  M   + +PN+ T+N L+D 
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            ++  +++EA EL  E+   GI  N +TYN+++ G C    + EA  +L  M+      D
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TF  +I  YCK  +V+  ++L  +I   G    + ++Y+ L+ G C SG ++ A    
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRG-LVANTVTYSILVQGFCQSGKLEIAEELF 403

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           Q+M++ G+ P+  T+ +L+  L  N      + I +D+  +K
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 207/392 (52%), Gaps = 5/392 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G   +   + S++N   + G    AL +  ++ E  +K  V  Y+ I+D+L 
Sbjct: 157 LVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLC 216

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++  M+  G++ ++ TYN L+  LCK  + +   +LL +M ++   P+ +
Sbjct: 217 RDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVI 276

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++    K G+++EA EL       G+S     YN+L++G C ++++ EA  +L  M
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM 336

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V     P+++T++++I   C V  V+  + +  ++  RG   N  +++ L++G+   G+ 
Sbjct: 337 VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKL 396

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+  M+  G LP+V+ Y  L+ GLC NG +++A+ +   ++++    ++  Y+ +
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTII 456

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  K G +  A  ++  +   G  PNV+ YT M+  LC+     +A+ L+ KM  +  
Sbjct: 457 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 516

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            PN  T+NT I+     G +  + KL+++MK 
Sbjct: 517 EPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 548



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 177/345 (51%), Gaps = 5/345 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L ++M+ +G+  S   + S++    + G     +++   +    + P V  +N 
Sbjct: 221 IDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNV 280

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D  + E +    N +Y  M   G+ PN  TYN L+   C  NR+  A  +L  M    
Sbjct: 281 LIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNN 340

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAF 185
           C+PD V++T+++   CK+ +V+E  +L  +       +    Y+ L+ G C+  K+E A 
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EMV  G+ P+V+TY  ++  LCD G +E +L I   +     N +I  +T +++G 
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             GG+  +A +L+  +  +G  PNV+ Y+ +I GLC  GS+ EA  +  +MEE+   PN 
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            TY+ LI    + G+L  ++++   M S G S +  +   ++ +L
Sbjct: 521 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 1/318 (0%)

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L+  ++  +  +A DL+  MIR   LP++V +S    G+ S    +  +    +ME N  
Sbjct: 37  LRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGI 96

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
             N+ T + +I+ F +      A  +  +++  G  P+   +  ++  LC  +   +A  
Sbjct: 97  AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVV 156

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+ +M    C PN VT+N+ + G+C  G    A+ LL +M +     ++ TY+ ++D L 
Sbjct: 157 LVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLC 216

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R   +  A  L  E+E  GI+ ++VTYN+++ G+C+AG   +  QLL  M       + I
Sbjct: 217 RDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVI 276

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           TFN++I  + K+GK+  A +L   +   G  +P+ I+Y SL+ G C    + EA   L  
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKG-ISPNTITYNSLMDGYCMQNRLSEANNMLDL 335

Query: 542 MLNEGICPNFATWNVLVR 559
           M+     P+  T+  L++
Sbjct: 336 MVRNNCSPDIVTFTSLIK 353



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 153/312 (49%), Gaps = 6/312 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           DGVQ LL+ M    +  +   F  +I+ + + G  ++A +++  +   G+ P    YN +
Sbjct: 258 DGVQ-LLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSL 316

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D    +NR S  N +   M R+   P++ T+  L+K  CK  RVD   KL  ++  +G 
Sbjct: 317 MDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGL 376

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFW 186
             + V+Y+ +V   C+ G++E A EL     S      V  Y  L++GLC   K+E+A  
Sbjct: 377 VANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +  ++    ++ +++ Y+ II  +C  G VE +  +   +  +G  PN+ ++T ++ G  
Sbjct: 437 IFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLC 496

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G   EA+ L  +M  +G  PN   Y+TLI     +G +  +  +  +M+      + +
Sbjct: 497 KKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADAS 556

Query: 307 TYSALIDGFAKA 318
           +   +ID  + A
Sbjct: 557 SIKMVIDMLSSA 568


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 173/638 (27%), Positives = 302/638 (47%), Gaps = 79/638 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++ +L E   ++ V  +++ ++ +   C E V +SVI +Y +  + +QAL +F R+RE F
Sbjct: 49  ILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIF 108

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P ++ YN +L+A +   ++  +  +++  +  G+ PN+ TYN+L+K  CK    + A
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALING 174
              L  M  +G  PD  SY+T+++ + K G++++A EL            V+ YN LI+G
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228

Query: 175 LCKE--HKIEEAFWLLCEMVDRGIDPNV-------------------------------- 200
             KE  HK     W    + D  + PNV                                
Sbjct: 229 FLKEKDHKTAMELWDRL-LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE 287

Query: 201 ---ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
               TYS++I  LCD GNV+ +  +  ++  R  + ++ ++ ++L G+   G+  E+ +L
Sbjct: 288 KDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLEL 347

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           W R++      N+V+Y+ LI GL  NG +DEA  +   M       + TTY   I G   
Sbjct: 348 W-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCV 406

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G +  A  +   + S+G   +V AY  ++  LC+     +A +L+++M+      N+  
Sbjct: 407 NGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            N  I GL    R+  A   L +M +  C P + +YN L+ GL +  +  EA   V E+ 
Sbjct: 467 CNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEML 526

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G + ++ TY+ +L G+CR   +  A +L  + L  G + D +  NI+I+  C  GK++
Sbjct: 527 ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLD 586

Query: 498 NAIQLL--------------------------DRIRGGGEW--------NPDIISYTSLL 523
           +A+ ++                          D  R    W         PDIISY +++
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIM 646

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C   G+  A  +     N GI P   TWN+LVR++
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 151/292 (51%), Gaps = 4/292 (1%)

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++I     N   D+A+ V  +M E   C P + +Y+ L++ F +A   +    ++    +
Sbjct: 83  SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G +PN+  Y  ++K+ C+   F +A   ++ M  E   P+  +++T I  L   G++D 
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTIL 452
           A++L D+M +    P++T YN L+DG L+    K A EL    +E   +  N+ T+N ++
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+ + G V +  ++  +M     + D  T++ +I+  C  G V+ A  + + +    + 
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL-DERKA 321

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + D+++Y ++L G C  G ++E+ + L +++      N  ++N+L++ L  N
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKES-LELWRIMEHKNSVNIVSYNILIKGLLEN 372



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 20/217 (9%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC-------LPNITTY--NELLDGLLRV- 423
           + V ++  ++ L     V+   ++++ ++  EC       L  I TY  N + D  L V 
Sbjct: 42  SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R++E F         G +  I +YNT+L+    A   V+   L       G   +  T+
Sbjct: 102 KRMREIF---------GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N++I   CK+ +   A   LD +   G + PD+ SY++++  +  +G + +A     +M 
Sbjct: 153 NVLIKMSCKKKEFEKARGFLDWMWKEG-FKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             G+ P+   +N+L+        H   + + D ++ +
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLED 248


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 293/600 (48%), Gaps = 40/600 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    + D +  L QQM+  G + +  +F ++I  + R G  + AL +   ++   
Sbjct: 206 LIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNS 265

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---- 116
           L+P V +YN  +D      +  M    +  MK +G+  +  TY  ++  LCK +R+    
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325

Query: 117 -------------------------------DGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                          + AY LL     KGC P  VSY  I+S +
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 146 CKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            + GQV+EA     E+       +S YN +I+ LCK  K+E A  +   M D G+ PNVI
Sbjct: 386 GRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVI 445

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T + ++  LC    ++ +  I   +  + C P+  ++ SL++G    GR  EA  L+ +M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +    +PN V Y++LI      G  ++   +  +M    C P++   +  +D   KAG +
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
                ++  + + G  P+  +YT ++  L +    H+A+ L   M  + C  +T  +NT 
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C  G+V+ A +LL++MK     P + TY  ++DGL +++R+ EA+ L  E +  GI
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           +LN+V Y++++ G  + G + EA+ ++ +++ +G   +  T+N ++ A  K  +++ A+ 
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               ++   +  P+ I+Y+ L+ G+C      +AF++ Q+M  +G  PN  T+  ++  L
Sbjct: 746 CFQSMK-DLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGL 804



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 146/571 (25%), Positives = 272/571 (47%), Gaps = 9/571 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           ++ +L++M + G   S    I ++ S+ +     +A      +R+   +P    Y +++ 
Sbjct: 149 LEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIG 208

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           AL        +  ++  M+  G   NV  +  L++   +  RVD A  LL EM +    P
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLL 188
           D V Y   +    K G+V+ A +      +   V     Y ++I  LCK  ++ EA  L 
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELF 328

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M      P    Y+T+I      G  E +  +L +   +GC P++ S+  +L      
Sbjct: 329 EHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRK 388

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  EA   +  M ++  +PN+  Y+ +I  LC  G ++ A+ V   M++    PNV T 
Sbjct: 389 GQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITV 447

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++D   KA  L  A  I+  +    C P+ V Y  +++ L ++    +A+ L E+M  
Sbjct: 448 NIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLD 507

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            N  PN V + + I+    CGR +   K+ ++M +  C P++   N  +D + +   +++
Sbjct: 508 ANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEK 567

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
              L  EI+  G   +  +Y  ++HG+ +AG   EA++L   M  +G  LD   +N +I 
Sbjct: 568 GRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVID 627

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            +CK GKVN A QLL+ ++  G   P +++Y S++ G+     + EA++  ++  ++GI 
Sbjct: 628 GFCKSGKVNKAYQLLEEMKTKGH-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIE 686

Query: 549 PNFATWNVLVRSLFSNLGHLGPVY-ILDDIM 578
            N   ++ L+   F  +G +   Y I++++M
Sbjct: 687 LNVVIYSSLIDG-FGKVGRIDEAYLIMEELM 716



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 260/561 (46%), Gaps = 32/561 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G   + +    LL++ + +G   S   +  +++   R G  ++ALK F  +++  
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++D L    +      +   MK  G+ PNV T NI++  LCK  R+D A 
Sbjct: 406 I-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +   + +K C PDAV+Y +                              LI GL +  +
Sbjct: 465 SIFEGLDHKTCRPDAVTYCS------------------------------LIEGLGRHGR 494

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA+ L  +M+D    PN + Y+++I +    G  E    I  +M   GC+P++    +
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
            +      G   +   L+  +   GF+P+  +Y+ LIHGL   G   EA  + Y M+E  
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C  +   Y+ +IDGF K+G +  A Q+   M + G  P VV Y  ++  L + +   +A+
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAY 674

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L E+   +    N V +++ I G    GR+D A  +++++ Q    PN+ T+N LLD L
Sbjct: 675 MLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 734

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++   + EA      ++      N +TY+ ++HG+C+     +AF    +M  +G K + 
Sbjct: 735 VKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNV 794

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+  +I    K G +  A  L ++ +  G      I Y +++ G+ N+    +A+   +
Sbjct: 795 FTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI-YNAIIEGLSNANRASDAYRLFE 853

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           +   +G      T  VL+ SL
Sbjct: 854 EARLKGCSIYTKTCVVLLDSL 874



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/513 (26%), Positives = 228/513 (44%), Gaps = 42/513 (8%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG K ++D      ++MK + +  +   +  +I+   + G  E AL +   +++ GL P 
Sbjct: 385 LGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPN 443

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V   N ++D L    R      I+  +      P+  TY  L++ L ++ RVD AYKL  
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 125 EM---------------------------GNK--------GCAPDAVSYTTIVSSICKLG 149
           +M                           G+K        GC+PD +   T +  + K G
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 150 QVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           ++E+ R L        F      Y  LI+GL K     EA+ L   M ++G   +   Y+
Sbjct: 564 EIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYN 623

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I   C  G V  +  +L +M  +G  P + ++ S++ G     R  EA  L+     +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   NVV YS+LI G    G +DEA  +  ++ +    PNV T++ L+D   KA  +  A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              +  M    C+PN + Y+ ++  LC+   F++A    ++M  +   PN  T+ T I G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G +  A  L ++ K+   + +   YN +++GL   NR  +A+ L  E    G  + 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             T   +L  + +A  + +A  ++G +L E  K
Sbjct: 864 TKTCVVLLDSLHKAECIEQA-AIVGAVLRETAK 895



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 196/398 (49%), Gaps = 4/398 (1%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN+L+  + +  K      +L EM   G  P+  T   I+ S      +  +   +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
                 P   ++T+L+ G L   R  +    L+ +M   G+  NV  ++TLI      G 
Sbjct: 192 RKLKFRPAFSAYTNLI-GALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D A+S+  +M+ NS  P+V  Y+  ID F KAG +  A + ++ M +NG   + V YT 
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           M+ VLC+ +  ++A  L E M      P    +NT I G    G+ + A  LL++ ++  
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C+P++ +YN +L  L R  +V EA +   E++K  I  N+ TYN ++  +C+AG +  A 
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGKLETAL 429

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +   M   G   + IT NI++   CK  ++++A  + + +       PD ++Y SL+ G
Sbjct: 430 VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL-DHKTCRPDAVTYCSLIEG 488

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           +   G + EA+   ++ML+    PN   +  L+R+ F 
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFK 526



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 3/278 (1%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  T   ++  F K+  L  A      M      P   AYT ++  L  +       +L
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            ++M       N   F T I+     GRVD A+ LLD+MK     P++  YN  +D   +
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             +V  A++   E++  G+ L+ VTY +++  +C+A  + EA +L   M        A  
Sbjct: 283 AGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA 342

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N +I  Y   GK  +A  LL+R R  G   P ++SY  +L  +   G + EA    ++M
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKG-CIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             + I PN +T+N+++  +    G L    ++ D M +
Sbjct: 402 KKDAI-PNLSTYNIMI-DMLCKAGKLETALVVRDAMKD 437



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/224 (19%), Positives = 83/224 (37%), Gaps = 70/224 (31%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++ K +G+  +  ++ S+I+ + +VG  ++A  +   + + G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719

Query: 61  LKPTVKIYNHILDALLAE-----------------------------------NRFSMIN 85
           L P V  +N +LDAL+                                      +F+   
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKN-------------------------------- 113
             +  M++ G +PNVFTY  ++  L K                                 
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839

Query: 114 ---NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
              NR   AY+L  E   KGC+    +   ++ S+ K   +E+A
Sbjct: 840 SNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 259/493 (52%), Gaps = 9/493 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P+V  Y  +L+A+   + F     +   M+  G  PN+ TYN+++  +C+  RVD A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALING 174
            ++L  + + G  PD VSYTT++  +C   + ++ + L         V     ++ L+  
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+   +E A  +L +M   G  PN    + +I+++C  G V+ +   L  M + GCNP+
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             S+T++L+G    GR   A +L   M+R+   PN V ++T I  LC  G +++A+ +  
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M E  C   + TY+AL+ GF   G +  A +++N +    C PN + YT ++  LC   
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAE 478

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A  L+ +M  ++CP N VTFN  +   C  G V+ AM+L++QM ++ C PN+ T+N
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFN 538

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LLDG+ +    +EA EL+  +   G+ L+ +TY++++  + R     EA Q+L  +   
Sbjct: 539 TLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM 598

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G +     +N I++A CK+ + + AI     +   G   P+  +Y  L+ G+ + G ++E
Sbjct: 599 GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG-CMPNESTYIILIEGLAHEGLLKE 657

Query: 535 AFIYLQKMLNEGI 547
           A   L ++  +G+
Sbjct: 658 ARYVLSELYAKGV 670



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/478 (30%), Positives = 249/478 (52%), Gaps = 9/478 (1%)

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S M + G +P+V TY +LL+A+CK++    A  +L EM  KGC P+ V+Y  I++ +C+ 
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 149 GQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G+V++A+E+  R     F   +  Y  ++ GLC   + ++   L  EMVD+   PN +T+
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
             ++   C  G VE ++ +L QM   GC PN      ++      GR  +A D  N M  
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G  P+ ++Y+T++ GLC  G  + A  +  +M   +CPPN  T++  I    + G +  
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A ++   M   GCS  +V Y  +V   C       A  L   +    C PNT+T+ T + 
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLT 472

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC   R+D A +LL +M Q +C  N  T+N L+    +   V+EA ELV ++ + G   
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N++T+NT+L G+ +     EA +LL  ++ +G  LD IT++ ++    ++ +   AIQ+L
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             ++  G   P +  Y  +L+ +C      +A  +   M++ G  PN +T+ +L+  L
Sbjct: 593 HAVQDMG-MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGL 649



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 222/468 (47%), Gaps = 8/468 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A+ +   +R  G  P +  YN I++ +  E R      I + +   G +P++ +Y  +L
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 264

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS---- 163
           K LC   R D    L  EM +K C P+ V++  +V   C+ G VE A ++  +       
Sbjct: 265 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 324

Query: 164 -GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
              ++ N +IN +CK+ ++++A+  L  M   G +P+ I+Y+T++  LC  G  E +  +
Sbjct: 325 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 384

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M  + C PN  +F + +      G   +A  L   M   G    +V Y+ L+HG C 
Sbjct: 385 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 444

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +D A+ +   +    C PN  TY+ L+ G   A  L  A+++   MI   C  N V 
Sbjct: 445 QGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVT 501

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +  +V   CQ     +A  L+ +M    C PN +TFNT + G+      + A++LL  + 
Sbjct: 502 FNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLV 561

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                 +  TY+ ++D L R +R +EA +++  ++  G++  +  YN IL  +C+     
Sbjct: 562 SKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETD 621

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +A      M+  G   +  T+ I+I     +G +  A  +L  +   G
Sbjct: 622 QAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 669



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 238/464 (51%), Gaps = 8/464 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+ +G + +   +  +IN   R G  + A ++  R+  +G +P +  Y  +L  L 
Sbjct: 209 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 268

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           A  R+  +  +++ M      PN  T+++L++  C+   V+ A ++L +M   GC P+  
Sbjct: 269 AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 328

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
               ++++ICK G+V++A +     G          Y  ++ GLC+  + E A  LL EM
Sbjct: 329 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 388

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +   PN +T++T I  LC  G +E ++ ++  M   GC+  I ++ +L+ G+ + GR 
Sbjct: 389 VRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV 448

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+N +  E   PN + Y+TL+ GLC    +D A  +  +M +  CP N  T++ L
Sbjct: 449 DSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVL 505

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +  F + G +  A ++ N+M+ +GC+PN++ +  ++  + ++    +A  L+  +  +  
Sbjct: 506 VSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGV 565

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +T+T+++ +  L    R + A+++L  ++     P +  YN++L  L +     +A +
Sbjct: 566 SLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAID 625

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
               +   G   N  TY  ++ G+   G++ EA  +L ++  +G
Sbjct: 626 FFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 669



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 197/395 (49%), Gaps = 8/395 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V+ L  +M  +    +E  F  ++  + R G+ E+A+++  ++ + G  P   + N +
Sbjct: 274 DDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIV 333

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++A+  + R        +NM   G  P+  +Y  +L+ LC+  R + A +LL EM  K C
Sbjct: 334 INAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNC 393

Query: 132 APDAVSYTTIVSSICKLGQVEEA---RELAMRFGS--GVSVYNALINGLCKEHKIEEAFW 186
            P+ V++ T +  +C+ G +E+A    EL   +G   G+  YNAL++G C + +++ A  
Sbjct: 394 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 453

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L   +     +PN ITY+T+++ LC    ++ +  +L +M  + C  N  +F  L+  + 
Sbjct: 454 LFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFC 510

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G   EA +L N+M+  G  PN++ ++TL+ G+  + + +EA+ + + +       +  
Sbjct: 511 QKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTI 570

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TYS+++D  ++      A Q+ + +   G  P V  Y  ++  LC+     QA      M
Sbjct: 571 TYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYM 630

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
               C PN  T+   I+GL   G +  A  +L ++
Sbjct: 631 VSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 665



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 43/296 (14%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  + LL +M  +    +E  F + I    + GL EQA+K+   + E+G    +  YN +
Sbjct: 379 EHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNAL 438

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +     + R      +++N+     EPN  TY  LL  LC   R+D A +LL EM  K C
Sbjct: 439 VHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDC 495

Query: 132 APDAVSYTTIVSSICKLGQVEEARELA---MRFG-------------------------- 162
             +AV++  +VS  C+ G VEEA EL    M  G                          
Sbjct: 496 PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALE 555

Query: 163 -------SGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                   GVS+    Y+++++ L +E + EEA  +L  + D G+ P V  Y+ I+ +LC
Sbjct: 556 LLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALC 615

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
                + ++     M   GC PN  ++  L++G    G   EA  + + +  +G L
Sbjct: 616 KRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 5/191 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL +M  +    +   F  +++ + + G  E+A+++  ++ E G  P +  +N 
Sbjct: 480 LDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 539

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +LD +  +        +   +   G+  +  TY+ ++  L + +R + A ++L  + + G
Sbjct: 540 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 599

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV----SVYNALINGLCKEHKIEEAF 185
             P    Y  I+ ++CK  + ++A +  A    +G     S Y  LI GL  E  ++EA 
Sbjct: 600 MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAR 659

Query: 186 WLLCEMVDRGI 196
           ++L E+  +G+
Sbjct: 660 YVLSELYAKGV 670



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 64/130 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ + + C  +    LL  +  +GVS     + SV++   R    E+A++M + +++ G
Sbjct: 540 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 599

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V +YN IL AL            ++ M  +G  PN  TY IL++ L     +  A 
Sbjct: 600 MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAR 659

Query: 121 KLLVEMGNKG 130
            +L E+  KG
Sbjct: 660 YVLSELYAKG 669


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/532 (29%), Positives = 266/532 (50%), Gaps = 47/532 (8%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A  AL  F+ +      P++  +NH+L  L     +S +  +Y+ M+  G+  +  T NI
Sbjct: 50  ATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNI 109

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           LL  LC  NR+   +     +  +G +P+ V+Y                           
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTY--------------------------- 142

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
              N LI GLC EH+I EA  L   M   G  P+V+TY T+I  LC  GN+  +L +  +
Sbjct: 143 ---NTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQE 199

Query: 226 M------FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW----------NRMIREGFLPN 269
           M      +   C PN+ ++  ++ G    GR  EA  L+          N M+ +G  P+
Sbjct: 200 MLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPD 259

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V ++ LI  LC  G + EA  +   M E+   P++ TY++LI+GF   G+L  A +++ 
Sbjct: 260 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 319

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M S GC P+V++Y  ++    +     +A  L  +M      PN +T+++ +KG+   G
Sbjct: 320 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 379

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +VD A KL   MK +    N  TY   LDGL + + + EA +L TE++    +L I   N
Sbjct: 380 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 439

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G+C+AG +  A++L  K+  EG + + +T+ I+I+ +C++G+V+ A  L+ ++   
Sbjct: 440 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 499

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G   PDII+Y +L+ G   S  ++E    L +M  + + P+  T +++V  L
Sbjct: 500 G-CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/494 (28%), Positives = 249/494 (50%), Gaps = 21/494 (4%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++   ++    Q   ++ ++R  GL       N +L+ L   NR       ++ + 
Sbjct: 72  FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL 131

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G  PN+ TYN L+K LC  +R+  A +L + M   GC PD V+Y T++  +C  G + 
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191

Query: 153 EARELAMRFGSGVS-----------VYNALINGLCKEHKIEEAFWLL----------CEM 191
            A +L     + +S            YN +++GLCK  + +EA  L            EM
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEM 251

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D+G+ P+++T++ +I +LC  G V  +  +LG M   G  P++ ++ SL++G+ + G  
Sbjct: 252 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 311

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           + A +L+  M  +G  P+V++Y+ LI+G      ++EA+ +  +M      PNV TY +L
Sbjct: 312 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 371

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G   AG +  A ++++ M ++G + N   Y   +  LC+N+   +A  L  ++   N 
Sbjct: 372 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 431

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
                  N  I GLC  G+++ A +L +++      PN+ TY  ++ G  R  +V +A  
Sbjct: 432 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 491

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ ++E  G   +I+TYNT++ G   +  + E  QLL +M  +    DAIT +I++    
Sbjct: 492 LIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLS 551

Query: 492 KQGKVNNAIQLLDR 505
           K  K    + LL R
Sbjct: 552 KDEKYQECLHLLPR 565



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 234/479 (48%), Gaps = 21/479 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM++ G+S        ++N    V    +    F  I   G  P +  YN ++  L 
Sbjct: 91  LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLC 150

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK------G 130
            E+R S    ++  M++ G  P+V TY  L+K LC    ++ A KL  EM N        
Sbjct: 151 MEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEIN 210

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS---------------GVSVYNALINGL 175
           C P+ ++Y  IV  +CK+G+ +EA++L     +                +  +N LI+ L
Sbjct: 211 CKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTL 270

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE K+ EA  LL  M++ GI P+++TY+++I   C VG++ ++  +   M  +GC P++
Sbjct: 271 CKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDV 330

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+  L+ GY    +  EA  L+N M+  G  PNV+ Y +L+ G+   G +D+A  +   
Sbjct: 331 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 390

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+ +    N  TY   +DG  K   L  A +++  + S+     +    C++  LC+   
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L EK++ E   PN VT+   I G C  G+VD A  L+ +M+   C P+I TYN 
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           L+ G    N+++E  +L+  + +  +  + +T + ++  + +     E   LL +  I+
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQ 569



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 232/478 (48%), Gaps = 26/478 (5%)

Query: 111 CKNNRVDGAYKL--LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS 166
           CK   V   + L     M      P   S+  ++S + K+    +   L   MR  SG+S
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRL-SGLS 101

Query: 167 ----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                 N L+N LC  +++ E F     ++ RG  PN++TY+T+I  LC    +  +  +
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE------GFLPNVVAYSTL 276
             +M   GC P++ ++ +L+KG    G  + A  L   M+ +         PNV+ Y+ +
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 277 IHGLCSNGSMDEAVSVSYQME----------ENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           + GLC  G  DEA  +  +M+          +    P++ T++ LID   K G ++ A +
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 281

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   MI +G  P++V Y  +++  C     + A  L   M  + C P+ +++N  I G  
Sbjct: 282 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 341

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V+ AMKL ++M      PN+ TY+ LL G+    +V +A +L + ++  GI  N  
Sbjct: 342 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 401

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY   L G+C+   + EA +L  ++     KL+    N +I   CK GK+  A +L +++
Sbjct: 402 TYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL 461

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              G   P++++YT ++ G C  G + +A + +QKM   G  P+  T+N L+R  + +
Sbjct: 462 SNEGH-EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES 518



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 152/307 (49%), Gaps = 17/307 (5%)

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN      L H    N +   A+   + M  ++  P++++++ L+ G AK  +      +
Sbjct: 32  PNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSL 91

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +N+M  +G S +      ++  LC  N   +  +    +      PN VT+NT IKGLC 
Sbjct: 92  YNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCM 151

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF----ELVTEIEKCGI-- 441
             R+  A +L  +M++  C P++ TY  L+ GL     +  A     E++ +I +  I  
Sbjct: 152 EHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINC 211

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLL----------GKMLIEGTKLDAITFNIIIYAYC 491
           + N++TYN I+ G+C+ G   EA QL            +ML +G + D +TFN++I   C
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLC 271

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+GKV  A +LL  +   G   PD+++Y SL+ G C  G +  A      M ++G  P+ 
Sbjct: 272 KEGKVIEAKKLLGVMIESG-IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDV 330

Query: 552 ATWNVLV 558
            ++NVL+
Sbjct: 331 ISYNVLI 337



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 5/297 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   + LL  M   G+      + S+I  +  VG    A ++F  +   G
Sbjct: 266 LIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  YN +++      +      +Y+ M   G  PNV TY+ LLK +    +VD A 
Sbjct: 326 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 385

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           KL   M   G A ++ +Y   +  +CK   + EA +L     S      +   N LI+GL
Sbjct: 386 KLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGL 445

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+E A+ L  ++ + G +PNV+TY+ +I   C  G V+ +  ++ +M   GC P+I
Sbjct: 446 CKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDI 505

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++ +L++G+    +  E   L +RM ++   P+ +  S ++  L  +    E + +
Sbjct: 506 ITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 562


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 178/642 (27%), Positives = 294/642 (45%), Gaps = 111/642 (17%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  VF  ++  Y   GL + AL +F  + + G  P+++  N +L+ L+        + +Y
Sbjct: 121 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 180

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             M R G+ P+VF  +I++ A CK+ +VD A   + +M N G  P+ V+Y ++++    L
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 240

Query: 149 GQVEEARELAMRFGS--GVS---------------------------------------- 166
           G VE A+ + ++F S  GVS                                        
Sbjct: 241 GDVEAAKGV-LKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 299

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            Y  LI+G C+  KI++A  LL EM+  G+  N+   +++I+  C  G +  + G++ +M
Sbjct: 300 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 359

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 P+ +S+ +LL GY   G T EA +L ++M++EG  P V+ Y+TL+ GLC  G+ 
Sbjct: 360 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAF 419

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+ + + M +    P+   YS L+DG  K  N  GAS +W  +++ G + + + +  M
Sbjct: 420 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTM 479

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+     +A  + +KM    C P+ +T+ T I G C    V  A K+   M++   
Sbjct: 480 ISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPI 539

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC---------- 456
            P+I  YN L+ GL +  R+ E  +L+TE+   G+  NIVTY  ++ G C          
Sbjct: 540 SPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFS 599

Query: 457 -------------------------RAGMVVEAFQLLGKMLIEG---------------- 475
                                    R G + EA  L+ KM+  G                
Sbjct: 600 SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYA 659

Query: 476 ------TKLDA----------ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
                   LD           I +NI I   CK GKV++A +    +   G + PD  +Y
Sbjct: 660 AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG-FVPDNFTY 718

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +L+ G   +G + EAF    +ML  G+ PN  T+N L+  L
Sbjct: 719 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/506 (31%), Positives = 253/506 (50%), Gaps = 16/506 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +ID    LL +M   G+  +  +  S+IN Y + G   +A  +  R+ ++ LKP    YN
Sbjct: 313 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 372

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD    E   S    +   M ++G+EP V TYN LLK LC+    D A ++   M  +
Sbjct: 373 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 432

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G APD V Y+T++  + K+   E A  L     A  F      +N +I+GLCK  K+ EA
Sbjct: 433 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 492

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M D G  P+ ITY T+I   C   NV  +  + G M     +P+I  + SL+ G
Sbjct: 493 EEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISG 552

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  E +DL   M   G  PN+V Y  LI G C  G +D+A S  ++M EN    N
Sbjct: 553 LFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSAN 612

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +   S ++ G  + G +  A+ +  +M+ +G  P+   + C +K    +++ + A   I 
Sbjct: 613 IIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPD---HECFLK----SDIRYAAIQKIA 665

Query: 365 KMAFENCP----PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
               E+C     PN + +N  I GLC  G+VD A +    +     +P+  TY  L+ G 
Sbjct: 666 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 725

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                V EAF L  E+ + G+  NIVTYN +++G+C++  V  A +L  K+  +G   + 
Sbjct: 726 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 785

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +T+N +I  YCK G ++ A +L D++
Sbjct: 786 VTYNTLIDGYCKIGNMDAAFKLKDKM 811



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 294/651 (45%), Gaps = 75/651 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  E     Y+ QQM   G+     +   ++N++ + G  ++A     ++   G
Sbjct: 163 LLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLG 222

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  Y+ +++  ++         +   M   G+  NV TY +L+K  CK  ++D A 
Sbjct: 223 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAE 282

Query: 121 KLLVEMGNKGC-APDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSVY--NALING 174
           K+L  M  +    PD  +Y  ++   C+ G++++A  L    +R G   +++  N+LING
Sbjct: 283 KVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLING 342

Query: 175 LCKEHKIEEAFWLLCEMVD-----------------------------------RGIDPN 199
            CK  +I EA  ++  MVD                                    GI+P 
Sbjct: 343 YCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPT 402

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY+T++  LC VG  + +L I   M  RG  P+   +++LL G         AS LW 
Sbjct: 403 VLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWK 462

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            ++  GF  + + ++T+I GLC  G M EA  +  +M++  C P+  TY  LIDG+ KA 
Sbjct: 463 DILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKAS 522

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           N+  A ++   M     SP++  Y  ++  L ++    +   L+ +M      PN VT+ 
Sbjct: 523 NVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYG 582

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--- 436
             I G C  G +D A     +M +     NI   + ++ GL R+ R+ EA  L+ ++   
Sbjct: 583 ALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDH 642

Query: 437 ---------------------------EKCGIQL--NIVTYNTILHGVCRAGMVVEAFQL 467
                                      E C   L  N + YN  + G+C+ G V +A + 
Sbjct: 643 GFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRF 702

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              + ++G   D  T+  +I+ Y   G V+ A +L D +   G   P+I++Y +L+ G+C
Sbjct: 703 FSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRG-LVPNIVTYNALINGLC 761

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
            S  +  A     K+  +G+ PN  T+N L+   +  +G++   + L D M
Sbjct: 762 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDG-YCKIGNMDAAFKLKDKM 811



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 208/431 (48%), Gaps = 37/431 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  EG+  +   + +++    RVG  + AL++++ + + G+ P    Y+ +LD L 
Sbjct: 390 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 449

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F   + ++ ++   G   +  T+N ++  LCK  ++  A ++  +M + GC+PD +
Sbjct: 450 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 509

Query: 137 SYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CK   V +A ++  AM        + +YN+LI+GL K  ++ E   LL EM
Sbjct: 510 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 569

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+ PN++TY  +I   C  G ++ +     +M   G + NI   ++++ G    GR 
Sbjct: 570 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRI 629

Query: 252 HEASDLWNRMIREGF--------------------------------LPNVVAYSTLIHG 279
            EA+ L  +M+  GF                                LPN + Y+  I G
Sbjct: 630 DEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAG 689

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G +D+A      +      P+  TY  LI G++ AGN+  A ++ + M+  G  PN
Sbjct: 690 LCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPN 749

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           +V Y  ++  LC++    +A  L  K+  +   PN VT+NT I G C  G +D A KL D
Sbjct: 750 IVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD 809

Query: 400 QMKQYECLPNI 410
           +M +    P+I
Sbjct: 810 KMIEEGISPSI 820



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 203/430 (47%), Gaps = 13/430 (3%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           P+  SY  +V  + +    +E R          +  N L++ LCK        W     V
Sbjct: 66  PNVKSYCKLVHILSRGRMYDETR----------AYLNQLVD-LCKFKDRGNVIWDELVGV 114

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            R    +   +  I+    + G  + +L +   M   G  P++ S  SLL   +  G TH
Sbjct: 115 YREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETH 174

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A  ++ +MIR G +P+V   S +++  C +G +DEA     +ME     PN+ TY +LI
Sbjct: 175 TAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLI 234

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC- 371
           +G+   G++  A  +   M   G S NVV YT ++K  C+     +A  ++  M  E   
Sbjct: 235 NGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL 294

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   +   I G C  G++D A++LLD+M +     N+   N L++G  +   + EA  
Sbjct: 295 VPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEG 354

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++T +    ++ +  +YNT+L G CR G   EAF L  KML EG +   +T+N ++   C
Sbjct: 355 VITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 414

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           + G  ++A+Q+   +   G   PD + Y++LL G+      + A    + +L  G   + 
Sbjct: 415 RVGAFDDALQIWHLMMKRG-VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSR 473

Query: 552 ATWNVLVRSL 561
            T+N ++  L
Sbjct: 474 ITFNTMISGL 483



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 179/367 (48%), Gaps = 37/367 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            +G   L + +   G + S   F ++I+   ++G   +A ++F ++++ G  P    Y  
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 513

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D     +       +   M+R+ + P++  YN L+  L K+ R+     LL EMG +G
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
             P+ V+Y  ++   CK G +++A             + + + + +++GL +  +I+EA 
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 633

Query: 186 WLLCEMVDRG--------------------------------IDPNVITYSTIISSLCDV 213
            L+ +MVD G                                + PN I Y+  I+ LC  
Sbjct: 634 LLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKT 693

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V+ +      + ++G  P+  ++ +L+ GY   G   EA  L + M+R G +PN+V Y
Sbjct: 694 GKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTY 753

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + LI+GLC + ++D A  + +++ +    PNV TY+ LIDG+ K GN+  A ++ ++MI 
Sbjct: 754 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813

Query: 334 NGCSPNV 340
            G SP++
Sbjct: 814 EGISPSI 820



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 153/356 (42%), Gaps = 60/356 (16%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM---------------------EENSC 301
           ++ F PNV +Y  L+H L      DE  +   Q+                      E + 
Sbjct: 61  QQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAF 120

Query: 302 PPNV------------TTYSAL---------------------IDGFAKAGNLLGASQIW 328
            P V             T +AL                     ++   K G    A  ++
Sbjct: 121 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 180

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            +MI  G  P+V   + MV   C++    +A   ++KM      PN VT+++ I G    
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 240

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVT 447
           G V+ A  +L  M +     N+ TY  L+ G  +  ++ EA +++  + E+  +  +   
Sbjct: 241 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 300

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  ++ G CR G + +A +LL +ML  G K +    N +I  YCK+G+++ A  ++ R+ 
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360

Query: 508 GGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              +WN  PD  SY +LL G C  G   EAF    KML EGI P   T+N L++ L
Sbjct: 361 ---DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGL 413


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 281/550 (51%), Gaps = 7/550 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++Q M+      +   + ++I ++  V  ++  L +F +++E G +PTV ++  ++    
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   MK   ++ ++  YN+ + +  K  +VD A+K   E+   G  PD V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++  +CK  +++EA E+         V     YN +I G     K +EA+ LL   
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQ 334

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G  P+VI Y+ I++ L  +G V+ +L +  +M  +   PN+ ++  L+      G+ 
Sbjct: 335 RAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKL 393

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L + M + G  PNV   + ++  LC +  +DEA ++  +M+   C P+  T+ +L
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL 453

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A +++ +M+ + C  N + YT ++K    +      H + + M  +NC
Sbjct: 454 IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    NT++  +   G  +    + +++K    +P+  +Y+ L+ GL++     E +E
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +++ G  L+   YN ++ G C+ G V +A+QLL +M  +G +   +T+  +I    
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  +++ A  L +  +       +++ Y+SL+ G    G + EA++ L++++ +G+ PN 
Sbjct: 634 KIDRLDEAYMLFEEAK-SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692

Query: 552 ATWNVLVRSL 561
            TWN L+ +L
Sbjct: 693 YTWNSLLDAL 702



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 291/586 (49%), Gaps = 9/586 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    ++  +D    LL +MK   +     ++   I+S+ +VG  + A K F+ I   G
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANG 268

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y  ++  L   NR      ++ +++++   P  + YN ++       + D AY
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            LL     KG  P  ++Y  I++ + K+G+V+EA     E+       +S YN LI+ LC
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLC 388

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +  K++ AF L   M   G+ PNV T + ++  LC    ++ +  +  +M  + C P+  
Sbjct: 389 RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F SL+ G    GR  +A  ++ +M+      N + Y++LI    ++G  ++   +   M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
              +C P++   +  +D   KAG       ++  + +    P+  +Y+ ++  L +    
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           ++ + L   M  + C  +T  +N  I G C CG+V+ A +LL++MK     P + TY  +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +   I+LN+V Y++++ G  + G + EA+ +L +++ +G 
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+N ++ A  K  ++N A+     ++   +  P+ ++Y  L+ G+C      +AF
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMK-ELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFS--NLGHLGPVYILDDIMAN 580
           ++ Q+M  +G+ P+  ++  ++  L    N+   G ++  D   AN
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF--DRFKAN 791



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 197/403 (48%), Gaps = 2/403 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           FG  V+    ++ G  K +K+ E + ++  M      P    Y+T+I +   V + +  L
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML 188

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM   G  P +H FT+L++G+   GR   A  L + M       ++V Y+  I   
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              G +D A    +++E N   P+  TY+++I    KA  L  A +++  +  N   P  
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCT 308

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
            AY  M+        F +A+SL+E+   +   P+ + +N  +  L   G+VD A+K+ ++
Sbjct: 309 YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE 368

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           MK+ +  PN++TYN L+D L R  ++  AFEL   ++K G+  N+ T N ++  +C++  
Sbjct: 369 MKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + EA  +  +M  +    D ITF  +I    K G+V++A ++ +++    +   + I YT
Sbjct: 428 LDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML-DSDCRTNSIVYT 486

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           SL+    N G  ++     + M+N+   P+    N  +  +F 
Sbjct: 487 SLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFK 529



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 193/397 (48%), Gaps = 2/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN+L+  + +    +    +L EM   G  P+V T   ++        +     ++  M 
Sbjct: 101 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMR 160

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
                P   ++T+L+  +     +     L+ +M   G+ P V  ++TLI G    G +D
Sbjct: 161 KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+S+  +M+ +S   ++  Y+  ID F K G +  A + ++ + +NG  P+ V YT M+
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
            VLC+ N   +A  + E +      P T  +NT I G    G+ D A  LL++ +    +
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++  YN +L  L ++ +V EA ++  E++K     N+ TYN ++  +CRAG +  AF+L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFEL 399

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M   G   +  T NI++   CK  K++ A  + + +       PD I++ SL+ G+ 
Sbjct: 400 RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLG 458

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G + +A+   +KML+     N   +  L+++ F++
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNH 495



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 228/519 (43%), Gaps = 41/519 (7%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--- 158
           +YN LL  + +    D   ++L EM   G  P   +   +V    K  ++ E  ++    
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159

Query: 159 --MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              +F    S Y  LI      +  +    L  +M + G +P V  ++T+I      G V
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +++L +L +M     + +I  +   +  +   G+   A   ++ +   G  P+ V Y+++
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC    +DEAV +   +E+N   P    Y+ +I G+  AG    A  +  R  + G 
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+V+AY C++  L +     +A  + E+M  ++  PN  T+N  I  LC  G++D A +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFE 398

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L D M++    PN+ T N ++D L +  ++ EA  +  E++      + +T+ +++ G+ 
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA---------------IQ 501
           + G V +A+++  KML    + ++I +  +I  +   G+  +                +Q
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518

Query: 502 LL----DRIRGGGE---------------WNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           LL    D +   GE               + PD  SY+ L+ G+  +G   E +     M
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             +G   +   +N+++   F   G +   Y L + M  K
Sbjct: 579 KEQGCVLDTRAYNIVIDG-FCKCGKVNKAYQLLEEMKTK 616



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 168/335 (50%), Gaps = 9/335 (2%)

Query: 34  ISVINSYR----RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           + ++N+Y     + G  E+   MF  I+     P  + Y+ ++  L+     +    ++ 
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           +MK  G   +   YNI++   CK  +V+ AY+LL EM  KG  P  V+Y +++  + K+ 
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

Query: 150 QVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +++EA  L     + R    V +Y++LI+G  K  +I+EA+ +L E++ +G+ PN+ T++
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++ +L     +  +L     M    C PN  ++  L+ G     + ++A   W  M ++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+ ++Y+T+I GL   G++ EA ++  + + N   P+   Y+A+I+G +     + A
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
             ++      G   +      ++  L +N+   QA
Sbjct: 817 FSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 9/289 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   MK +G       +  VI+ + + G   +A ++   ++  G +PTV  Y  ++D L 
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R      ++   K   +E NV  Y+ L+    K  R+D AY +L E+  KG  P+  
Sbjct: 634 KIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLY 693

Query: 137 SYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           ++ +++ ++ K  ++ EA       +EL  +       Y  LINGLCK  K  +AF    
Sbjct: 694 TWNSLLDALVKAEEINEALVCFQSMKEL--KCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  +G+ P+ I+Y+T+IS L   GN+  +  +  +    G  P+   + ++++G   G 
Sbjct: 752 EMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGN 811

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           R  +A  L+    R G   +      L+  L  N  +++A  V   + E
Sbjct: 812 RAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 5/201 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++ K + +  +  ++ S+I+ + +VG  ++A  +   + + G
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P +  +N +LDAL+     +     + +MK     PN  TY IL+  LCK  + + A+
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
               EM  +G  P  +SYTT++S + K G + EA  L  RF +   V     YNA+I GL
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807

Query: 176 CKEHKIEEAFWLLCEMVDRGI 196
              ++  +AF L  E   RG+
Sbjct: 808 SNGNRAMDAFSLFEETRRRGL 828


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 278/555 (50%), Gaps = 6/555 (1%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C++D    L  +M   G+  +  +  ++IN Y + G   +A ++  R+ ++ L+P    Y
Sbjct: 338 CKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSY 397

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + ++D    E   +    +Y+ M R G++ NV T+N LLK LC+    + A  +   M  
Sbjct: 398 STLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLK 457

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEE 183
           +G  PD VSY T++  + K+G+   A       LA  +G     +N +ING CK  K+ E
Sbjct: 458 RGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIE 517

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A      M + G +P+ +TY T+I   C +GNVE +  +  +M      P+I  + SL+ 
Sbjct: 518 AEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIG 577

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G     +T E  DL + M  +G  PNVV Y TLI G C  G +D+A +  + M E    P
Sbjct: 578 GLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAP 637

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           NV   S ++    + G +  A+ +  +M++     +   +  + K    N    +    +
Sbjct: 638 NVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTL 697

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++ +     PN+V +N  I GLC  G+VD A K+   +      P+  TY  L+ G    
Sbjct: 698 DESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAA 757

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             V +AF L  E+ K G+  NI+TYN +++G+C++G +  A +L  K+ ++G   + I++
Sbjct: 758 GNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISY 817

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           NI+I  YCK G    A+ L +++   G  +P +I+Y++L++G C  G M +A   L +M 
Sbjct: 818 NILIDGYCKNGNTREALDLRNKMLKEG-ISPSLITYSALIYGFCKQGDMGKATNLLDEMR 876

Query: 544 NEGICPNFATWNVLV 558
                 N A +  LV
Sbjct: 877 ELFADQNIAKFVKLV 891



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 159/633 (25%), Positives = 292/633 (46%), Gaps = 76/633 (12%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           E    S  VF  ++  Y   G+ + AL +F  + + G  P+++  N +L +L+ +   S 
Sbjct: 142 EDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSN 201

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCK--------------------------NNRVD 117
              +Y ++ R G+ P+VFT +I++ A CK                          N+ +D
Sbjct: 202 AILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLID 261

Query: 118 G---------AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSG 164
           G         A  +L  MG +G   + V+ T ++   C+  ++EEA    RE+    G  
Sbjct: 262 GCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMV 321

Query: 165 VS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           +    Y  LI+G C+  K+++A  L  EM++ G+  N+   + +I+  C  G V  +  +
Sbjct: 322 LDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERL 381

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M      P  +S+++L+ G+   G   +A  ++N M+R G   NVV +++L+ GLC 
Sbjct: 382 LMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCR 441

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G+ ++A+ V + M +    P+  +Y  L+D   K G    A  +WN +++ G   +  A
Sbjct: 442 VGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYA 501

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +  M+   C+     +A     +M      P+ VT+ T I G C  G V+ A K+ ++M+
Sbjct: 502 FNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKME 561

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +   LP+I  YN L+ GL +  + +E  +L++E+   G+  N+VTY T++ G C  G + 
Sbjct: 562 KEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLD 621

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL---------------DRIR 507
           +AF     M+ +G   + I  + I+ +  + G+++ A  LL               DR+ 
Sbjct: 622 KAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLH 681

Query: 508 GGGEWN-------------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
              + N                   P+ + Y   + G+C SG + +A      +L  G  
Sbjct: 682 KADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741

Query: 549 PNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           P+  T+  L+   +S  G++   + L D M  +
Sbjct: 742 PDNFTYCTLIHG-YSAAGNVNDAFSLRDEMLKR 773



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 222/479 (46%), Gaps = 40/479 (8%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++    RVG  E AL +++ + + G+ P    Y  +LD L     F     +++++   
Sbjct: 434 SLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILAR 493

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G   + + +N ++   CK  ++  A +    M   G  PD V+Y T++   CKLG VEEA
Sbjct: 494 GYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEA 553

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            ++  +         + +YN+LI GL K  K  E   LL EM  +G+ PNV+TY T+I+ 
Sbjct: 554 FKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAG 613

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR------ 263
            CD G ++ +      M  +G  PN+   + ++      GR  EA+ L  +M+       
Sbjct: 614 WCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLD 673

Query: 264 EGF-----------------------------LPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            G+                             LPN V Y+  I GLC +G +D+A  +  
Sbjct: 674 HGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFS 733

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +      P+  TY  LI G++ AGN+  A  + + M+  G +PN++ Y  ++  LC++ 
Sbjct: 734 SLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSG 793

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A  L +K+  +   PN +++N  I G C  G    A+ L ++M +    P++ TY+
Sbjct: 794 NLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYS 853

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            L+ G  +   + +A  L+ E+ +     NI  +  ++ G  + G V +  +L   M I
Sbjct: 854 ALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHI 912



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 198/389 (50%), Gaps = 5/389 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
             +MK  G       + ++I+ Y ++G  E+A K+  ++ +  + P++++YN ++  L  
Sbjct: 522 FNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFK 581

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
             +   +  + S M   G+ PNV TY  L+   C   R+D A+    +M  KG AP+ + 
Sbjct: 582 SKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVII 641

Query: 138 YTTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            + IVSS+ +LG+++EA  L  +  +  V + +   + L K          + + +D   
Sbjct: 642 CSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESS 701

Query: 197 D----PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
                PN + Y+  I+ LC  G V+ +  I   + +RG +P+  ++ +L+ GY   G  +
Sbjct: 702 KSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVN 761

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  L + M++ G  PN++ Y+ LI+GLC +G++D A  +  ++      PNV +Y+ LI
Sbjct: 762 DAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILI 821

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DG+ K GN   A  + N+M+  G SP+++ Y+ ++   C+     +A +L+++M      
Sbjct: 822 DGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFAD 881

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            N   F   ++G   CG V    KL + M
Sbjct: 882 QNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 24/300 (8%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           +  F PNV ++  L+H L      DE  S   ++      P+   YS+L+          
Sbjct: 87  QSNFRPNVNSHCKLVHILSRARMYDETRSYLNEL----VTPSKNNYSSLV---------- 132

Query: 323 GASQIWNRMI----SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
               +WN ++        SP V  +  ++K+ C+  M   A  + + M    C P+  + 
Sbjct: 133 ----VWNELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSC 186

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  +  L   G    A+ + D + +   +P++ T + +++   +   V  A + V E++ 
Sbjct: 187 NRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDY 246

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G +LN+VTYN+++ G    G +  A  +L  M   G   + +T  ++I  YC+Q K+  
Sbjct: 247 LGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEE 306

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A ++L  +        D  +Y  L+ G C    M +A     +MLN G+  N    N L+
Sbjct: 307 AEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALI 366


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 265/476 (55%), Gaps = 14/476 (2%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           PN FTY  L+  LCK  ++D AY+LL EM ++G  P    +  ++  +CK G+  +A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87

Query: 155 -RELA-MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYSTIISSLC 211
            + +A  +    +  +N L++ L K  ++EEAF +   M       PNV+TY+T+I+ LC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G ++ ++ +L  M   GC PN+ +++ L++G    GRT +   L   M R GF P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TL++GLC +  +DEA+ +   M  + C P V TY++L++ F ++  +  A ++   M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              GC P+V+ Y  ++  LC++     A +L+++M    C P+ +T++T I GLC   RV
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 392 --DW----AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
             DW    A ++L+ MKQ  C PN  TY  +++GL R  + ++A  L+  +    +  ++
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            +++ ++  +C++  +  A+++ G M     K + + +  +I    K G+V+ A+++ + 
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +     + P + +Y S+L G+C  G ++EA   ++ M+++   P+ A++  L+R L
Sbjct: 448 MV--ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 271/544 (49%), Gaps = 20/544 (3%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           +Q  + E    +E  + S+I+   + G  +QA ++   +R+ G+ P V ++N ++  L  
Sbjct: 18  VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCK 77

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAV 136
             RF      +  +      P++ T+NIL+ AL K+ RV+ A+++   M     C P+ V
Sbjct: 78  AGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVV 137

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT+++ +CK G+++ A EL            V  Y+ L+ GLCK  + ++ F LL EM
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG  P+VI Y+T+++ LC    ++ +L ++  M   GC P + ++ SL++ +    + 
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L   M   G  P+V+ Y+T+I GLC +  +D+A ++  QM    C P+V TYS +
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 312 IDGFAK------AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           IDG  K         L  A +I   M   GC PN   Y  +++ LC+     QA +L+ +
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR--- 422
           M      P+  +F+  I  LC    +D A K+   M + EC PN   Y  L+DGL +   
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           V++    FEL+ E  + G    + TYN++L G+C  G + EA +++  M+ +    D  +
Sbjct: 438 VDKAVRVFELMVESFRPG----VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  +I   C+   V  A +L   +   G +  ++  Y  L+  +C    + +A     K+
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKG-FAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552

Query: 543 LNEG 546
           +  G
Sbjct: 553 IEAG 556



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 267/537 (49%), Gaps = 17/537 (3%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           +N   R G   QA+++F   RE    P    Y  ++  L    +      +   M+  G+
Sbjct: 5   LNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P V  +N ++K LCK  R   A      +    C PD +++  +V ++ K G+VEEA +
Sbjct: 62  PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 157 L--AMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +  +M   S     V  Y  +INGLCK+ K++ A  LL  M + G  PNVITYS ++  L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  +    +L +M  RG  P++  + +LL G     R  EA +L   MIR G  P V
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y++L+   C +  +D A  +   M E  CPP+V  Y+ +I G  +   L  A  +  +
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNM------FHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           M++  C P+V+ Y+ ++  LC++           A  ++E M    CPPN  T+   I+G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   +   A+ LL +M   E +P++++++ ++  L + + +  A+++   + +   + N
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            V Y  ++ G+ + G V +A ++  ++++E  +    T+N ++   C  G++  A+++++
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVE 480

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +    E  PD  SY +L+ G+C    ++EA+   Q +  +G       +NVLV  L
Sbjct: 481 GMIHK-ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 259/523 (49%), Gaps = 46/523 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D    LL +M+  G+     V   VI    + G    AL  F  +    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNILLKALCKNNRVDGA 119
             P +  +N ++DAL+   R      I+ +M       PNV TY  ++  LCK+ ++D A
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALING 174
            +LL  M   GC P+ ++Y+ +V  +CK G+ ++     +E+  R F   V +YN L+NG
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +++EA  L+  M+  G  P V+TY++++   C    V+ +  ++  M  RGC P+
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE------ 288
           + ++ +++ G     R  +A  L  +M+    +P+V+ YST+I GLC +  +D       
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +   M++  CPPN  TY+ +I+G  +A     A  +  RMI +   P++ +++ ++ 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTV-------------------------------- 376
            LC+++    A+ +   M+   C PN V                                
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPG 455

Query: 377 --TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+N+ + GLCG GR++ A+++++ M   EC P+  +Y  L+ GL RV+ V+EA+EL  
Sbjct: 456 VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            +E  G  + +  YN +++ +C+   + +A  +  K++  G K
Sbjct: 516 AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 6/268 (2%)

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             +AG    A Q++       C PN   Y  ++  LC+     QA+ L+++M     PP 
Sbjct: 8   LVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
               N  IKGLC  GR   A+     +   +C P+I T+N L+D L++  RV+EAF++  
Sbjct: 65  VAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124

Query: 435 EIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            +      L N+VTY T+++G+C+ G +  A +LL  M   G   + IT+++++   CK 
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G+ +    LL  +   G + PD+I Y +LL G+C S  + EA   +Q M+  G  P   T
Sbjct: 185 GRTDKGFTLLQEMTRRG-FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +N L+  LF     +   + L  +M+ +
Sbjct: 244 YNSLM-ELFCRSKQVDRAFRLIQVMSER 270


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 265/476 (55%), Gaps = 14/476 (2%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           PN FTY  L+  LCK  ++D AY+LL EM ++G  P    +  ++  +CK G+  +A   
Sbjct: 28  PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87

Query: 155 -RELA-MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYSTIISSLC 211
            + +A  +    +  +N L++ L K  ++EEAF +   M       PNV+TY+T+I+ LC
Sbjct: 88  FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G ++ ++ +L  M   GC PN+ +++ L++G    GRT +   L   M R GF P+V+
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TL++GLC +  +DEA+ +   M  + C P V TY++L++ F ++  +  A ++   M
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVM 267

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              GC P+V+ Y  ++  LC++     A +L+++M    C P+ +T++T I GLC   RV
Sbjct: 268 SERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRV 327

Query: 392 --DW----AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
             DW    A ++L+ MKQ  C PN  TY  +++GL R  + ++A  L+  +    +  ++
Sbjct: 328 DADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDL 387

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            +++ ++  +C++  +  A+++ G M     K + + +  +I    K G+V+ A+++ + 
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +     + P + +Y S+L G+C  G ++EA   ++ M+++   P+ A++  L+R L
Sbjct: 448 MV--ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/544 (28%), Positives = 271/544 (49%), Gaps = 20/544 (3%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           +Q  + E    +E  + S+I+   + G  +QA ++   +R+ G+ P V ++N ++  L  
Sbjct: 18  VQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCK 77

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAV 136
             RF      +  +      P++ T+NIL+ AL K+ RV+ A+++   M     C P+ V
Sbjct: 78  AGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVV 137

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT+++ +CK G+++ A EL            V  Y+ L+ GLCK  + ++ F LL EM
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG  P+VI Y+T+++ LC    ++ +L ++  M   GC P + ++ SL++ +    + 
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L   M   G  P+V+ Y+T+I GLC +  +D+A ++  QM    C P+V TYS +
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 312 IDGFAK------AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           IDG  K         L  A +I   M   GC PN   Y  +++ LC+     QA +L+ +
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR--- 422
           M      P+  +F+  I  LC    +D A K+   M + EC PN   Y  L+DGL +   
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           V++    FEL+ E  + G    + TYN++L G+C  G + EA +++  M+ +    D  +
Sbjct: 438 VDKAVRVFELMVESFRPG----VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  +I   C+   V  A +L   +   G +  ++  Y  L+  +C    + +A     K+
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKG-FAMEVGVYNVLVNELCKKKRLSDAHGVANKL 552

Query: 543 LNEG 546
           +  G
Sbjct: 553 IEAG 556



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/537 (27%), Positives = 267/537 (49%), Gaps = 17/537 (3%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           +N   R G   QA+++F   RE    P    Y  ++  L    +      +   M+  G+
Sbjct: 5   LNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P V  +N +++ LCK  R   A      +    C PD +++  +V ++ K G+VEEA +
Sbjct: 62  PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121

Query: 157 L--AMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +  +M   S     V  Y  +INGLCK+ K++ A  LL  M + G  PNVITYS ++  L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  +    +L +M  RG  P++  + +LL G     R  EA +L   MIR G  P V
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y++L+   C +  +D A  +   M E  CPP+V  Y+ +I G  +   L  A  +  +
Sbjct: 242 VTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQ 301

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNM------FHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           M++  C P+V+ Y+ ++  LC++           A  ++E M    CPPN  T+   I+G
Sbjct: 302 MVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEG 361

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   +   A+ LL +M   E +P++++++ ++  L + + +  A+++   + +   + N
Sbjct: 362 LCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPN 421

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            V Y  ++ G+ + G V +A ++  ++++E  +    T+N ++   C  G++  A+++++
Sbjct: 422 PVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVE 480

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +    E  PD  SY +L+ G+C    ++EA+   Q +  +G       +NVLV  L
Sbjct: 481 GMIHK-ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 259/523 (49%), Gaps = 46/523 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D    LL +M+  G+     V   VI    + G    AL  F  +    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNILLKALCKNNRVDGA 119
             P +  +N ++DAL+   R      I+ +M       PNV TY  ++  LCK+ ++D A
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALING 174
            +LL  M   GC P+ ++Y+ +V  +CK G+ ++     +E+  R F   V +YN L+NG
Sbjct: 156 IELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNG 215

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +++EA  L+  M+  G  P V+TY++++   C    V+ +  ++  M  RGC P+
Sbjct: 216 LCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPD 275

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE------ 288
           + ++ +++ G     R  +A  L  +M+    +P+V+ YST+I GLC +  +D       
Sbjct: 276 VINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEA 335

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +   M++  CPPN  TY+ +I+G  +A     A  +  RMI +   P++ +++ ++ 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTV-------------------------------- 376
            LC+++    A+ +   M+   C PN V                                
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPG 455

Query: 377 --TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+N+ + GLCG GR++ A+++++ M   EC P+  +Y  L+ GL RV+ V+EA+EL  
Sbjct: 456 VATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQ 515

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            +E  G  + +  YN +++ +C+   + +A  +  K++  G K
Sbjct: 516 AVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 6/268 (2%)

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             +AG    A Q++       C PN   Y  ++  LC+     QA+ L+++M     PP 
Sbjct: 8   LVRAGQHGQAVQLFR---EERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
               N  I+GLC  GR   A+     +   +C P+I T+N L+D L++  RV+EAF++  
Sbjct: 65  VAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124

Query: 435 EIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            +      L N+VTY T+++G+C+ G +  A +LL  M   G   + IT+++++   CK 
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G+ +    LL  +   G + PD+I Y +LL G+C S  + EA   +Q M+  G  P   T
Sbjct: 185 GRTDKGFTLLQEMTRRG-FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +N L+  LF     +   + L  +M+ +
Sbjct: 244 YNSLM-ELFCRSKQVDRAFRLIQVMSER 270


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 165/526 (31%), Positives = 262/526 (49%), Gaps = 15/526 (2%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           + Q L  F  +   G+ P VK  N +L  L    R+  +  +YS+M + G+EP++FTYN 
Sbjct: 175 STQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNT 234

Query: 106 LLKALCKNNRVDGAYKLLVEMGNK--GCAPDAVSYTTIVSSICKLGQVEEARELA--MRF 161
           LL + CK  R+D A  LL +M  +  GC P+ V+Y  +++ + + G++E+A +L   MR 
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRL 294

Query: 162 GSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
               S   YN LI GL     +E+A  LL EM + GI P V+TY+T+I  L   GN E +
Sbjct: 295 SKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAA 354

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
                +M  +G  P++ ++ SL+ GY   G   +A  L+  + R G  P V+ Y+ LI G
Sbjct: 355 QVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDG 414

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C  G ++ A  +  +M E  C P+V TY+ L++G     NL      ++ M+S G  P+
Sbjct: 415 YCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPD 474

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA----M 395
             AY   +           A  L E+M       +TVT+N  I GLC  G +  A    M
Sbjct: 475 CFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWM 534

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           K++    + +C+    TY  L+       R+ EA  +   +   G+  ++VTY   +H  
Sbjct: 535 KMVTDGLRLDCV----TYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTY 590

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CR G +  A+    KML EG + + +T+N++++A C+ G+  +A Q    +   G   P+
Sbjct: 591 CRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG-LVPN 649

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +YT L+ G C  G    A     +M  +GI P+  T N L +  
Sbjct: 650 KYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGF 695



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 248/513 (48%), Gaps = 9/513 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI--RE 58
           ++  L +    D ++ +   M   GV  S   + ++++S+ + G  +QA+ +   +  R 
Sbjct: 200 VLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARA 259

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G  P    YN +++ L  +        +   M R   + + FTYN L+  L   + V+ 
Sbjct: 260 AGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEK 318

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----EL-AMRFGSGVSVYNALIN 173
           A  LL+EM N+G  P  V+Y T++  + K G  E A+    E+ A      +  YN+LIN
Sbjct: 319 AGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLIN 378

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CK   +++A  L  ++   G+ P V+TY+ +I   C +G++E +  +  +M    C P
Sbjct: 379 GYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLP 438

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++T L+ G  +          ++ M+ +G  P+  AY+T I    + G++  A  + 
Sbjct: 439 DVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLR 498

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M       +  TY+ LIDG  K G+L  A  +W +M+++G   + V YTC++   C+ 
Sbjct: 499 EEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCER 558

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A ++ + M      P+ VT+  FI   C  G +  A     +M +    PN  TY
Sbjct: 559 GRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTY 618

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+  L R+ R + A++   E+ + G+  N  TY  ++ G C+ G  V A +L  +M  
Sbjct: 619 NVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQ 678

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +G   D  T N +   +  +G + +A+Q L+ +
Sbjct: 679 KGIHPDHCTHNALFKGF-GEGHMYDAVQYLENV 710



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 4/172 (2%)

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +    +M ++   P +   N +L  L    R  +   + +++ + G++ +I TYNT+L  
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 455 VCRAGMVVEAFQLLGKM--LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            C+AG + +A  LL  M     G   + +T+N++I    ++G++  A QL+D +R   + 
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA 298

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +    +Y  L+ G+     +++A   L +M NEGI P   T+N L+  LF  
Sbjct: 299 S--AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKT 348


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 258/477 (54%), Gaps = 7/477 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+   +  NVFTY+ ++K+L K  + + +YK+L EM   GC PD  ++  ++    +   
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 151 VEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +E+ARE+      SG       Y+ LI+GL K  K++E+  +L EMV RG  P++  YS+
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++ +L     V+ +  +  +M   G +P+   F  L+ G    G+  +AS+ + +M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNV  Y+ L+HGLCS+G +++A ++  +M+ +SC P+V TY+ L+D   KA  +    
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++  M + G  PNV+ ++ ++  LC+     +A  +   M    C PN  T+ T I GL
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK-CGIQLN 444
           C   +V  A +L ++M Q    P+   YN L+ G  +   + EA +L  E+    G+Q  
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           IVT+NT++ G C+ G +  A +L+ +M  +G   D+ T+ I+I    +  K++ A+++  
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++R   ++  D +S  S + G+C +G + +A+   +     G  PN  T+ +L  SL
Sbjct: 421 QMREK-KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 476



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 123/380 (32%), Positives = 203/380 (53%), Gaps = 3/380 (0%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M D+ I  NV TYS+II SL      E S  +L +M   GCNP++ +F  +++G+     
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A +++  M+  G+ P+ V+Y  LIHGL   G +DE++ +  +M      P++  YS+
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+   AKA  +  AS +++ MI  G  P+ + +  ++  LCQ      A    ++M    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C PN   +N  + GLC  G+++ A  L  +MK + C P++ TYN LLD + +  RV+E  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L   +   G   N++T++T++HG+CR G + +A ++ G ML  G K +  T+  +I   
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA-FIYLQKMLNEGICP 549
           C+  KV  A +L +++       PD ++Y SL+ G C  G M EA  +Y +     G+ P
Sbjct: 301 CRAEKVIQARELFEKMTQAC-IPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359

Query: 550 NFATWNVLVRSLFSNLGHLG 569
              T+N L+   F  LG LG
Sbjct: 360 TIVTFNTLIDG-FCKLGKLG 378



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 245/490 (50%), Gaps = 6/490 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M+ + ++ +   + S+I S  +    E++ K+   +   G  P V  +N ++      N 
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 +Y +M   G +P+  +Y+IL+  L K  ++D + K+L EM  +G  P   +Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 141 IVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +V ++ K  +V+ A  L    +R G      ++  LI GLC+  K+++A     +M   G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             PNV  Y+ ++  LC  G +E +  +  +M    C+P++ ++ +LL       R  E  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L+  M   G++PNV+ +STLIHGLC  G +++A+ V   M E  C PN  TY+ LI G 
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA-FENCPPN 374
            +A  ++ A +++ +M      P+ VAY  ++   C+     +A  L  +M+      P 
Sbjct: 301 CRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPT 360

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            VTFNT I G C  G++  A +L+ +M       +  TY  L+ GL R  ++ EA E+  
Sbjct: 361 IVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYK 420

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++ +    L+ V+  + + G+C+ G + +A+ +       G   +  TF I+  +  K G
Sbjct: 421 QMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLG 480

Query: 495 KVNNAIQLLD 504
           +V +A +L++
Sbjct: 481 RVEDAQKLME 490



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 229/477 (48%), Gaps = 47/477 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ + +    +L++M   G +     F  V+  + R    E+A +++  + E G
Sbjct: 16  IIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP    Y+ ++  L    +      I S M   G  P++  Y+ L++AL K  RVD A 
Sbjct: 76  YKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHAS 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--------GVSVYNALI 172
            L  EM   G  PD + +  ++  +C+ G+V++A E   RF           V VYN L+
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASE---RFKQMPKHGCQPNVPVYNVLL 192

Query: 173 NGLCKEHKIEEAFWLLCEMVDR-----------------------------------GID 197
           +GLC   ++E+A  L  EM                                      G  
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           PNVIT+ST+I  LC  G +E +L + G M   GC PN +++T+L+ G     +  +A +L
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS-CPPNVTTYSALIDGFA 316
           + +M +    P+ VAY++LI G C  GSMDEA  +  +M   +   P + T++ LIDGF 
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 372

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G L  A+++   M + G + +   Y  ++  L +     +A  + ++M  +    + V
Sbjct: 373 KLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPV 432

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +  +F+ GLC  G +D A  + +  ++   +PN  T+  L + L+++ RV++A +L+
Sbjct: 433 SCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 489



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 196/408 (48%), Gaps = 6/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D    +L +M + G + S   + S++ +  +    + A  +F  +   G
Sbjct: 86  LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGG 145

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P   ++  ++  L    +    +  +  M + G +PNV  YN+LL  LC + +++ A 
Sbjct: 146 HHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQAN 205

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            L  EM +  C+PD V+Y T++ ++CK  +VEE  +L  AMR   +   V  ++ LI+GL
Sbjct: 206 TLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGL 265

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  ++E+A  +   M++ G  PN  TY+T+IS LC    V  +  +  +M      P+ 
Sbjct: 266 CRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDA 325

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            ++ SL+ GY   G   EA  L+  M    G  P +V ++TLI G C  G +  A  +  
Sbjct: 326 VAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVA 385

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M       +  TY  LI G ++A  L  A +++ +M       + V+    V  LC+  
Sbjct: 386 EMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTG 445

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
              QA+++ E        PN  TF    + L   GRV+ A KL++  K
Sbjct: 446 NIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 493


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 154/468 (32%), Positives = 237/468 (50%), Gaps = 10/468 (2%)

Query: 104 NILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           N LL  LC   RV  A  +L++ M   GC PD VSY  ++  +C   + EEA EL     
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192

Query: 163 S--------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                     V  Y+ +ING   E ++++ + L  EM+DRGI P+V+TY+T+I  LC   
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ 252

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             + +  +  QM   G  PNI ++  L+ GYL  G+  E   +   M   G  PN   Y 
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYG 312

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +L++ LC NG   EA      M      P+VTTY  ++ G+A  G L     + N M++N
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G SPN   +        +  +  +A  +  KM  +   P+ V++   I  LC  GRVD A
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDA 432

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
               +QM      P+I  ++ L+ GL  V++ ++  EL  E+   GI  NIV +NTIL  
Sbjct: 433 EVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 492

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ G V+E  +L+  +   G + D I++N +I  +C  G ++ A +LL+ +   G   P
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG-LKP 551

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           D  SY +LL G C +G +  A+ + +KML+ GI P   T+N ++  LF
Sbjct: 552 DSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 269/567 (47%), Gaps = 13/567 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  +    QM  EGV+    VF S++     V   E+  ++F+ +   G
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  +N IL  L  E R      +  +++  G+ P+V +YN L+   C    +D A 
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 538

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           KLL  M + G  PD+ SY T++   CK G+++ A     + L+     GV  YN +++GL
Sbjct: 539 KLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGL 598

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  +  EA  L   M++ G   ++ TY+ I++ LC    V+ ++ +   +  +G   NI
Sbjct: 599 FQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNI 658

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  ++   L GGR  +A DL+  +   G + NVV Y  ++  L   GS++E  S+   
Sbjct: 659 ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSA 718

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME+N   PN    +AL+      G++  A    +++     S      + ++ +   +  
Sbjct: 719 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEY 778

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H A SL +K        N    +  IK      R+D A  L  +M      P++ TYN 
Sbjct: 779 QHHAKSLPKKYRI----LNEANSSALIKK---ARRIDDAYSLFREMLMKGLTPDVVTYNT 831

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +L GL +  R  EA EL   +     Q+NI TYN IL+G+C++  V EAF++   +  +G
Sbjct: 832 ILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 891

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            +L+ ITFNI+I A  K G+  +A+ L   I   G   PD+++Y  +   +   G ++E 
Sbjct: 892 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG-LVPDVVTYRLVAENLIEEGSLEEF 950

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLF 562
                 M   G   +    N LVR L 
Sbjct: 951 DGLFLTMEKSGTPLDSRLLNALVRRLL 977



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/564 (26%), Positives = 253/564 (44%), Gaps = 46/564 (8%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM---E 97
           +RVG A   L    R+ E G  P    YN +L  L  E R      +   M  D +    
Sbjct: 143 KRVGEAMDVL--LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCP 200

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK---------- 147
           PNV +Y+ ++       +VD  Y L +EM ++G  PD V+YTT++  +CK          
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260

Query: 148 -------------------------LGQVEEARELAMRFGSG-----VSVYNALINGLCK 177
                                    +G+ +E   +     +G        Y +L+N LCK
Sbjct: 261 FQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCK 320

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +  EA +    M+ +GI P+V TY  ++      G +     +L  M   G +PN H 
Sbjct: 321 NGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHI 380

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F      Y   G   +A D++N+M ++G  P+ V+Y  LI  LC  G +D+A     QM 
Sbjct: 381 FNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 440

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P++  +S+L+ G           +++  M++ G  PN+V +  ++  LC+     
Sbjct: 441 NEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +   L++ +      P+ +++NT I G C  G +D A KLL+ M      P+  +YN LL
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            G  +  R+  A+    ++   GI   +VTYNTILHG+ +     EA +L   M+  GTK
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D  T+NII+   CK   V+ AI++   +   G    +II++  ++  +   G  ++A  
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG-LQLNIITFNIMIGALLKGGRKEDAMD 679

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
               +   G+  N  T+ ++V +L
Sbjct: 680 LFAAIPANGLVQNVVTYRLVVENL 703



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/594 (24%), Positives = 274/594 (46%), Gaps = 34/594 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+     K  +  +  LL  M   G+S +  +F    ++Y + G+ ++A+ +F ++R+ G
Sbjct: 349 MLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG 408

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++DAL    R       ++ M  +G+ P++  ++ L+  LC  ++ +   
Sbjct: 409 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVE 468

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
           +L  EM N G  P+ V + TI+ ++CK G+V E + L      M     V  YN LI+G 
Sbjct: 469 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 528

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I+EA  LL  MV  G+ P+  +Y+T++   C  G ++++     +M   G  P +
Sbjct: 529 CLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGV 588

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ ++L G     R  EA +L+  MI  G   ++  Y+ +++GLC +  +DEA+ +   
Sbjct: 589 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQN 648

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +       N+ T++ +I    K G    A  ++  + +NG   NVV Y  +V+ L +   
Sbjct: 649 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGS 708

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +  SL   M      PN+   N  ++ L   G +  A   L ++ +       +T + 
Sbjct: 709 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSM 768

Query: 416 LLD----------------------------GLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
           L+                              + +  R+ +A+ L  E+   G+  ++VT
Sbjct: 769 LISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVT 828

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YNTILHG+ + G   EA +L   M+   T+++  T+NII+   CK   V+ A ++   + 
Sbjct: 829 YNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLC 888

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G    +II++  ++  +   G  ++A      +   G+ P+  T+ ++  +L
Sbjct: 889 SKG-LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENL 941



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 263/560 (46%), Gaps = 7/560 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L  +M   G+      + +VI+   +  L ++A  +F ++ + G+KP +  YN
Sbjct: 218 QVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYN 277

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++   L+  ++  +  +   M   G +PN  TY  LL  LCKN R   A      M  K
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK 337

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEA 184
           G  P   +Y  ++      G + E  +L  +   +G+S    ++N   +   K   I++A
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M  +G+ P+ ++Y  +I +LC +G V+ +     QM   G  P+I  F+SL+ G
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  +  +L+  M+  G  PN+V ++T++  LC  G + E   +   +E     P+
Sbjct: 458 LCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD 517

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V +Y+ LIDG   AG +  AS++   M+S G  P+  +Y  ++   C+      A+S   
Sbjct: 518 VISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFR 577

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM      P  VT+NT + GL    R   A +L   M       +I TYN +L+GL + N
Sbjct: 578 KMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSN 637

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V EA ++   +   G+QLNI+T+N ++  + + G   +A  L   +   G   + +T+ 
Sbjct: 638 CVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYR 697

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           +++    ++G +     L   +   G   P+     +L+  + + G +  A  YL K+  
Sbjct: 698 LVVENLIEEGSLEEFDSLFSAMEKNGTA-PNSQMLNALVRRLLHRGDISRAGAYLSKLDE 756

Query: 545 EGICPNFATWNVLVRSLFSN 564
                  +T ++L+ S+FS+
Sbjct: 757 RNFSVEASTTSMLI-SIFSS 775



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/587 (25%), Positives = 266/587 (45%), Gaps = 38/587 (6%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D  + + QQM   GV  +   +  +I+ Y  +G  ++ ++M   +   G KP    Y  
Sbjct: 254 FDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGS 313

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+ L    R       + +M   G++P+V TY I+L        +   + LL  M   G
Sbjct: 314 LLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG 373

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAF 185
            +P+   +    S+  K G +++A ++   MR          Y ALI+ LCK  ++++A 
Sbjct: 374 ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +M++ G+ P+++ +S+++  LC V   E    +  +M   G +PNI  F ++L   
Sbjct: 434 VKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL 493

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  E   L + +   G  P+V++Y+TLI G C  G++DEA  +   M      P+ 
Sbjct: 494 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            +Y+ L+ G+ KAG +  A   + +M+SNG +P VV Y  ++  L Q   F +A  L   
Sbjct: 554 FSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 613

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M       +  T+N  + GLC    VD A+K+   +       NI T+N ++  LL+  R
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            ++A +L   I   G+  N+VTY  ++  +   G + E   L   M   GT  ++   N 
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI-ISYTSLLWGICNSGGMQ----------- 533
           ++     +G ++ A   L ++    E N  +  S TS+L  I +S   Q           
Sbjct: 734 LVRRLLHRGDISRAGAYLSKL---DERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYR 790

Query: 534 ------------------EAFIYLQKMLNEGICPNFATWNVLVRSLF 562
                             +A+   ++ML +G+ P+  T+N ++  LF
Sbjct: 791 ILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLF 837



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 190/370 (51%), Gaps = 5/370 (1%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PN  TYS +I   C +G++E      G +   G   +      LL G   G R  EA 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 256 D-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSAL 311
           D L  RM   G +P+ V+Y+ L+ GLC+    +EA+ + + M ++   SCPPNV +YS +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+GF   G +     ++  M+  G  P+VV YT ++  LC+  +F +A ++ ++M     
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+N  I G    G+    +++L++M      PN  TY  LL+ L +  R +EA  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
               +   GI+ ++ TY  +LHG    G + E   LL  M+  G   +   FNI   AY 
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYA 389

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G ++ A+ + +++R  G  +PD +SY +L+  +C  G + +A +   +M+NEG+ P+ 
Sbjct: 390 KCGIIDKAMDIFNKMRQQG-LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 552 ATWNVLVRSL 561
             ++ LV  L
Sbjct: 449 VVFSSLVYGL 458



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 229/510 (44%), Gaps = 16/510 (3%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            ID    LL+ M   G+      + ++++ Y + G  + A   F ++   G+ P V  YN 
Sbjct: 534  IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            IL  L    RFS    +Y NM   G + +++TYNI+L  LCK+N VD A K+   + +KG
Sbjct: 594  ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG 653

Query: 131  CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
               + +++  ++ ++ K G+ E+A +L     A      V  Y  ++  L +E  +EE  
Sbjct: 654  LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFD 713

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L   M   G  PN    + ++  L   G++  +   L ++  R  +    + + L+  +
Sbjct: 714  SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIF 773

Query: 246  LLGGRTHEASDLWN--RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                  H A  L    R++ E     ++  +  I         D+A S+  +M      P
Sbjct: 774  SSDEYQHHAKSLPKKYRILNEANSSALIKKARRI---------DDAYSLFREMLMKGLTP 824

Query: 304  NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            +V TY+ ++ G  + G    A +++  MI++    N+  Y  ++  LC++N   +A  + 
Sbjct: 825  DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMF 884

Query: 364  EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            + +  +    N +TFN  I  L   GR + AM L   +     +P++ TY  + + L+  
Sbjct: 885  QSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEE 944

Query: 424  NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
              ++E   L   +EK G  L+    N ++  + + G +  A   L K+  +   L+A T 
Sbjct: 945  GSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTT 1004

Query: 484  NIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            + +I  + +    ++A  L ++ R   E N
Sbjct: 1005 SELISLFSRGEYQHHAKSLPEKYRLLNEAN 1034



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 15/184 (8%)

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVN----RVKEAFELVT----EIEKCGIQL-- 443
           A+KL D++  +    ++  +N LL  + R +       E+  +V+     +  C I++  
Sbjct: 33  ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ-L 502
           N  TY+ ++   CR G +   F   G +L  G ++D I  N ++   C   +V  A+  L
Sbjct: 93  NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI---CPNFATWNVLVR 559
           L R+   G   PD +SY  LL G+CN    +EA   L  M ++ +    PN  +++ ++ 
Sbjct: 153 LQRMPELG-CMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVIN 211

Query: 560 SLFS 563
             F+
Sbjct: 212 GFFT 215


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 257/499 (51%), Gaps = 12/499 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A+    +F ++  +   M+R G+  N++TYNIL+   C+ +++  A  L
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+ +++++  C   ++ +A  L      M +      +  LI+GL  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV RG  PN++TY  +++ LC  G+++ +  +L +M       N+  
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++++          +A +L+  M  +G  PNV+ YS+LI  LC+     +A  +   M 
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PNV T++ALID F K G L+ A ++++ MI     P++  Y+ ++   C ++   
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  + E M  ++C PN VT+NT I G C   R+D  ++L  +M Q   + N  TY  L+
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA---FQLLGKMLIE 474
            G  +      A  +  ++   G+  NI+TYNT+L G+C+ G + +A   F+ L +  +E
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            T     T+NI+I   CK GKV +   L   +   G   PD+I Y +++ G C  G  +E
Sbjct: 503 PT---IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIIYNTMISGFCRKGLKEE 558

Query: 535 AFIYLQKMLNEGICPNFAT 553
           A    +KM  +G  P+  T
Sbjct: 559 ADALFRKMREDGPLPDSGT 577



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 257/487 (52%), Gaps = 5/487 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L ++M+  G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 91  LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 150

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P++   + +L+      R S    +   M   G  P+  T+  L+  L  +N+   A 
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  +GC P+ V+Y  +V+ +CK G ++ A  L     A +  + V +Y+ +I+ L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK    ++A  L  EM ++G+ PNVITYS++IS LC+      +  +L  M  R  NPN+
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L+  ++  G+  EA  L++ MI+    P++  YS+LI+G C +  +DEA  +   
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PNV TY+ LI+GF KA  +    +++  M   G   N V YT ++    Q   
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M  +   PN +T+NT + GLC  G+++ AM + + +++ +  P I TYN 
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++G+ +  +V++ ++L   +   G++ +++ YNT++ G CR G+  EA  L  KM  +G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570

Query: 476 TKLDAIT 482
              D+ T
Sbjct: 571 PLPDSGT 577



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 235/464 (50%), Gaps = 6/464 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           Y  +L+    + ++D A  L   M      P    +  ++S+I K+ + +    L  +  
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 163 S-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
             G+S     YN LIN  C+  +I  A  LL +M+  G +P+++T S++++  C    + 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ ++ QM   G  P+  +FT+L+ G  L  +  EA  L +RM++ G  PN+V Y  ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +GLC  G +D A ++  +ME      NV  YS +ID   K  +   A  ++  M + G  
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNV+ Y+ ++  LC    +  A  L+  M      PN VTFN  I      G++  A KL
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            D+M +    P+I TY+ L++G    +R+ EA  +   +       N+VTYNT+++G C+
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           A  + E  +L  +M   G   + +T+  +I+ + +    +NA  +  ++   G  +P+I+
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG-VHPNIM 471

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Y +LL G+C +G +++A +  + +    + P   T+N+++  +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 213/397 (53%), Gaps = 1/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  N+ TY+ +I+  C    +  +L +LG+M 
Sbjct: 88  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I + +SLL GY  G R  +A  L ++M+  G+ P+ + ++TLIHGL  +    
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EAV++  +M +  C PN+ TY  +++G  K G++  A  + N+M +     NVV Y+ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A +L  +M  +   PN +T+++ I  LC   R   A +LL  M + +  
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T+N L+D  ++  ++ EA +L  E+ K  I  +I TY+++++G C    + EA  +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M+ +    + +T+N +I  +CK  +++  ++L   +   G    + ++YT+L+ G  
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG-NTVTYTTLIHGFF 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +     A +  ++M+++G+ PN  T+N L+  L  N
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/436 (23%), Positives = 206/436 (47%), Gaps = 14/436 (3%)

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
           GN   AP ++     +  +C  G+          F SG   Y  ++       K+++A  
Sbjct: 25  GNPRIAPSSID----LCGMCYWGRA---------FSSGSGDYREILRNGLHSMKLDDAIG 71

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L   MV     P++  ++ ++S++  +   +  + +  +M   G + N++++  L+  + 
Sbjct: 72  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              +   A  L  +M++ G+ P++V  S+L++G C    + +AV++  QM E    P+  
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T++ LI G         A  + +RM+  GC PN+V Y  +V  LC+      A +L+ KM
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  N V ++T I  LC     D A+ L  +M+     PN+ TY+ L+  L    R 
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A  L++++ +  I  N+VT+N ++    + G +VEA +L  +M+      D  T++ +
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I  +C   +++ A  + + +    +  P++++Y +L+ G C +  + E     ++M   G
Sbjct: 372 INGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430

Query: 547 ICPNFATWNVLVRSLF 562
           +  N  T+  L+   F
Sbjct: 431 LVGNTVTYTTLIHGFF 446


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 140/466 (30%), Positives = 252/466 (54%), Gaps = 9/466 (1%)

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAM 159
           F  NI L+ L +N  ++   K L  M  +G  PD ++ T+++   C+ G+  +A R + +
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 160 RFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              SG    V  YN LI G CK  +I++A  +L  M    + P+V+TY+TI+ SLCD G 
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGK 224

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ ++ +L +   R C P++ ++T L++         +A  L + M ++G  P+VV Y+ 
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNV 284

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI+G+C  G +DEA+     M    C PNV T++ ++      G  + A ++   M+  G
Sbjct: 285 LINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           CSP+VV +  ++  LC+  +  +A  ++EKM    C PN++++N  + G C   ++D A+
Sbjct: 345 CSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAI 404

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           + L+ M    C P+I TYN LL  L +  +   A E++ ++   G    ++TYNT++ G+
Sbjct: 405 EYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGL 464

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            + G    A +LL +M  +G K D IT++ ++     +GKV+ AI++   + G     P 
Sbjct: 465 TKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLS-IKPS 523

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            ++Y +++ G+C +     A  +L  M+ +G  P  AT+ +L+  +
Sbjct: 524 AVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 236/451 (52%), Gaps = 8/451 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+ LK   R+   G  P V     ++       +      I   ++  G  P+V 
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RE 156
           TYN+L+   CK+  +D A ++L  M     APD V+Y TI+ S+C  G+++EA     R+
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +       V  Y  LI   C +  + +A  LL EM  +G  P+V+TY+ +I+ +C  G +
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M + GC PN+ +   +L+     GR  +A  L   M+R+G  P+VV ++ L
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+ LC    +  A+ V  +M ++ C PN  +Y+ L+ GF +   +  A +    M+S GC
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGC 415

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  ++  LC++     A  ++ +++ + C P  +T+NT I GL   G+ ++A +
Sbjct: 416 YPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL++M++    P+I TY+ LL GL    +V EA ++  ++E   I+ + VTYN I+ G+C
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A     A   L  M+ +G K    T+ I+I
Sbjct: 536 KAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 228/433 (52%), Gaps = 3/433 (0%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+V     L++  C++ +   A +++  + N G  PD ++Y  ++   CK G++++A ++
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              M     V  YN ++  LC   K++EA  +L   + R   P+VITY+ +I + C+   
Sbjct: 200 LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSG 259

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  ++ +L +M  +GC P++ ++  L+ G    GR  EA    N M   G  PNV+ ++ 
Sbjct: 260 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNI 319

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++  +CS G   +A  +   M    C P+V T++ LI+   +   L  A  +  +M  +G
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C PN ++Y  ++   CQ     +A   +E M    C P+ VT+NT +  LC  G+ D A+
Sbjct: 380 CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAV 439

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++L+Q+    C P + TYN ++DGL +V + + A EL+ E+ + G++ +I+TY+T+L G+
Sbjct: 440 EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGL 499

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
              G V EA ++   M     K  A+T+N I+   CK  + + AI  L  +   G   P 
Sbjct: 500 GCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG-CKPT 558

Query: 516 IISYTSLLWGICN 528
             +YT L+ GI +
Sbjct: 559 KATYTILIEGIAD 571



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 185/344 (53%), Gaps = 9/344 (2%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           NIH     L+  +  G   E      RMI +G +P+V+A ++LI G C +G   +A  + 
Sbjct: 111 NIH-----LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIM 165

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             +E +   P+V TY+ LI G+ K+G +  A Q+  RM     +P+VV Y  +++ LC +
Sbjct: 166 EILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDS 222

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  ++++     C P+ +T+   I+  C    V  AMKLLD+M++  C P++ TY
Sbjct: 223 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 282

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L++G+ +  R+ EA + +  +   G Q N++T+N IL  +C  G  ++A +LL  ML 
Sbjct: 283 NVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLR 342

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G     +TFNI+I   C++  +  AI +L+++   G   P+ +SY  LL G C    M 
Sbjct: 343 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG-CMPNSLSYNPLLHGFCQEKKMD 401

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
            A  YL+ M++ G  P+  T+N L+ +L  +      V IL+ +
Sbjct: 402 RAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQL 445



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 187/379 (49%), Gaps = 43/379 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EID    +L++M V     +   + +++ S    G  ++A+++  R  +    P V  Y 
Sbjct: 192 EIDKALQVLERMSVAPDVVT---YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYT 248

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A   ++       +   M++ G +P+V TYN+L+  +CK  R+D A K L  M   
Sbjct: 249 ILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLY 308

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV------------------- 167
           GC P+ +++  I+ S+C  G+  +A  L    +R G   SV                   
Sbjct: 309 GCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRA 368

Query: 168 ------------------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                             YN L++G C+E K++ A   L  MV RG  P+++TY+T++++
Sbjct: 369 IDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTA 428

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G  + ++ IL Q+  +GC+P + ++ +++ G    G+T  A++L   M R+G  P+
Sbjct: 429 LCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ YSTL+ GL   G +DEA+ + + ME  S  P+  TY+A++ G  KA     A     
Sbjct: 489 IITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLA 548

Query: 330 RMISNGCSPNVVAYTCMVK 348
            M+  GC P    YT +++
Sbjct: 549 YMVEKGCKPTKATYTILIE 567



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 125/232 (53%), Gaps = 4/232 (1%)

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ L +N    +    +E+M ++   P+ +   + I+G C  G+   A ++++ ++    
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ TYN L+ G  +   + +A ++   +E+  +  ++VTYNTIL  +C +G + EA +
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQV---LERMSVAPDVVTYNTILRSLCDSGKLKEAME 230

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L + +      D IT+ I+I A C    V  A++LLD +R  G   PD+++Y  L+ GI
Sbjct: 231 VLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG-CKPDVVTYNVLINGI 289

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           C  G + EA  +L  M   G  PN  T N+++RS+ S    +    +L D++
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 143/304 (47%), Gaps = 40/304 (13%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G       +  +IN   + G  ++A+K    +  +G +P V  +N IL ++ 
Sbjct: 266 LLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMC 325

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNIL------------------------------ 106
           +  R+     + ++M R G  P+V T+NIL                              
Sbjct: 326 STGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSL 385

Query: 107 -----LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
                L   C+  ++D A + L  M ++GC PD V+Y T+++++CK G+ + A E+  + 
Sbjct: 386 SYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQL 445

Query: 162 GS-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            S G S     YN +I+GL K  K E A  LL EM  +G+ P++ITYST++  L   G V
Sbjct: 446 SSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKV 505

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++ I   M      P+  ++ +++ G     +T  A D    M+ +G  P    Y+ L
Sbjct: 506 DEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTIL 565

Query: 277 IHGL 280
           I G+
Sbjct: 566 IEGI 569



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 5/236 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL  M  +G S S   F  +IN   R  L  +A+ +  ++ + G  P    YN +L 
Sbjct: 333 AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH 392

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +          M   G  P++ TYN LL ALCK+ + D A ++L ++ +KGC+P
Sbjct: 393 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLL 188
             ++Y T++  + K+G+ E A EL   MR       +  Y+ L+ GL  E K++EA  + 
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
            +M    I P+ +TY+ I+  LC       ++  L  M  +GC P   ++T L++G
Sbjct: 513 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 65/134 (48%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D    +L Q+  +G S     + +VI+   +VG  E A ++   +R  GLKP +  Y+ +
Sbjct: 436 DAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTL 495

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  E +      I+ +M+   ++P+  TYN ++  LCK  +   A   L  M  KGC
Sbjct: 496 LRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGC 555

Query: 132 APDAVSYTTIVSSI 145
            P   +YT ++  I
Sbjct: 556 KPTKATYTILIEGI 569


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 271/524 (51%), Gaps = 37/524 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REF 59
           +IE      +   ++ +L QMK E     E  FI +  +Y +  L E+A+ +F+R+  EF
Sbjct: 67  LIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEF 126

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNM---KRDGMEPNVFTYNILLKALCKNNRV 116
             K TVK +N +L+ ++ E  F+     Y+++   K   + PN  T+N+++KA+C+   V
Sbjct: 127 QCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLV 186

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLC 176
           D A ++  E+  + CAPD  +Y+T++  +C                              
Sbjct: 187 DKAIEVFREIPLRNCAPDNYTYSTLMHGLC------------------------------ 216

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE +I+EA  LL EM   G  PN++ ++ +IS+LC  G++  +  ++  MF++GC PN  
Sbjct: 217 KEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEV 276

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ +L+ G  L G+  +A  L N+M+    +PN V + TLI+G    G   +   V   +
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           E      N   YS+LI G  K G    A ++W  M+  GC PN + Y+ ++  LC+    
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKL 396

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A   + +M  +   PN+ T+++ ++G    G    A+ +  +M    C+ N   Y+ L
Sbjct: 397 DEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSIL 456

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG- 475
           ++GL +  +  EA  +  ++   GI+L++V Y++++HG C A +V +  +L  +ML +G 
Sbjct: 457 INGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGP 516

Query: 476 -TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
             + D IT+NI++ A+C Q  +  AI +L+ +   G  +PD I+
Sbjct: 517 VVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQG-CDPDFIT 559



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 244/498 (48%), Gaps = 16/498 (3%)

Query: 81  FSMINPIYSNMKRDGMEPNVF---TYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAV 136
           F  +  +   MKR   E  VF    + ++ KA  K +  + A  L   M G   C     
Sbjct: 77  FRSLEEVLHQMKR---ERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVK 133

Query: 137 SYTTIVSSICKLGQVEEAREL--------AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           S+ ++++ I + G    A E         ++        +N +I  +C+   +++A  + 
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E+  R   P+  TYST++  LC    ++ ++ +L +M V G  PN+ +F  L+      
Sbjct: 194 REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKK 253

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G    A+ L + M  +G +PN V Y+ L+HGLC  G +++AVS+  QM  N C PN  T+
Sbjct: 254 GDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             LI+GF   G     +++   + + G   N   Y+ ++  LC+   F+QA  L ++M  
Sbjct: 314 GTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVG 373

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           + C PNT+ ++  I GLC  G++D A   L +MK    LPN  TY+ L+ G        +
Sbjct: 374 KGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHK 433

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  +  E+       N V Y+ +++G+C+ G  +EA  +  +ML  G KLD + ++ +I+
Sbjct: 434 AILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIH 493

Query: 489 AYCKQGKVNNAIQLLDRIRGGGE-WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            +C    V   ++L +++   G    PD+I+Y  LL   C    +  A   L  ML++G 
Sbjct: 494 GFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGC 553

Query: 548 CPNFATWNVLVRSLFSNL 565
            P+F T ++ +++L  N+
Sbjct: 554 DPDFITCDIFLKTLRENM 571



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 200/413 (48%), Gaps = 8/413 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  VI +  R+GL ++A+++F  I      P    Y+ ++  L  E R      +   M
Sbjct: 172 TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM 231

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + +G  PN+  +N+L+ ALCK   +  A KL+  M  KGC P+ V+Y  +V  +C  G++
Sbjct: 232 QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKL 291

Query: 152 EEARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E+A  L  +  S   V N      LING   + +  +   +L  +  RG   N   YS++
Sbjct: 292 EKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSL 351

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           IS LC  G    ++ +  +M  +GC PN   +++L+ G    G+  EA    + M  +G+
Sbjct: 352 ISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY 411

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LPN   YS+L+ G    G   +A+ V  +M  N+C  N   YS LI+G  K G  + A  
Sbjct: 412 LPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALM 471

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--CPPNTVTFNTFIKG 384
           +W +M+S G   +VVAY+ M+   C  N+  Q   L  +M  +     P+ +T+N  +  
Sbjct: 472 VWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNA 531

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR-VNRVKEAFELVTEI 436
            C    +  A+ +L+ M    C P+  T +  L  L   +N  ++  E + E+
Sbjct: 532 FCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDEL 584



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 198/428 (46%), Gaps = 23/428 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    LL +M+VEG   +   F  +I++  + G   +A K+   +   G  P    YN
Sbjct: 220 RIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYN 279

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  + +      + + M  +   PN  T+  L+       R     ++LV +  +
Sbjct: 280 ALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEAR 339

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G   +   Y++++S +CK G+  +A EL         G    VY+ALI+GLC+E K++EA
Sbjct: 340 GHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEA 399

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L EM ++G  PN  TYS+++    + G+   ++ +  +M    C  N   ++ L+ G
Sbjct: 400 RGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILING 459

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM--EENSCP 302
               G+  EA  +W +M+  G   +VVAYS++IHG C+   +++ + +  QM  +     
Sbjct: 460 LCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQ 519

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V TY+ L++ F    ++  A  I N M+  GC P+ +     +K L +N         
Sbjct: 520 PDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLREN--------- 570

Query: 363 IEKMAFENCPPNTVTF-NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
                  N P +   F +  +  L    R   A K+++ M     LP  +T+  ++  + 
Sbjct: 571 ------MNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVC 624

Query: 422 RVNRVKEA 429
           +   V++A
Sbjct: 625 KPKNVRKA 632



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/389 (21%), Positives = 175/389 (44%), Gaps = 28/389 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K ++     L+  M ++G   +E  + ++++     G  E+A+ +  ++    
Sbjct: 246 LISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +  +++  + + R S    +  +++  G   N + Y+ L+  LCK  + + A 
Sbjct: 306 CVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAM 365

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGL 175
           +L  EM  KGC P+ + Y+ ++  +C+ G+++EAR    E+  + +      Y++L+ G 
Sbjct: 366 ELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGY 425

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +     +A  +  EM +     N + YS +I+ LC  G    +L +  QM  RG   ++
Sbjct: 426 FEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDV 485

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVS 293
            +++S++ G+       +   L+N+M+ +G +  P+V+ Y+ L++  C   S+  A+ + 
Sbjct: 486 VAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDIL 545

Query: 294 YQMEENSCPPNVTT---------------------YSALIDGFAKAGNLLGASQIWNRMI 332
             M +  C P+  T                        L+    K    +GAS+I   M+
Sbjct: 546 NIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMM 605

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
                P    +  +V+ +C+     +A S
Sbjct: 606 HKFLLPKASTWAMVVQQVCKPKNVRKAIS 634


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 154/520 (29%), Positives = 265/520 (50%), Gaps = 7/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P+   +N +L ++    ++  +  + + M   G+ P+V+T NIL
Sbjct: 51  DDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNIL 110

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C  NR+  A+ +L ++   G  PD  ++TT++  +C  G++ +A  L  +     F
Sbjct: 111 INSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGF 170

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      P+V+ Y++II SLC    V  +  
Sbjct: 171 QPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFN 230

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G +P+I ++TSL+            + L N+MI    +P+VV +ST++  LC
Sbjct: 231 LFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALC 290

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M      PNV TY+AL+DG      +  A ++++ M+ NG +PNV+
Sbjct: 291 KEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVI 350

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   C+     +A  L E+M  +   PNTVT+NT +   C  GR+  A+ L  +M
Sbjct: 351 SYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEM 409

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             +  +P++ TY  LLD L + + + EA  L+  IE   +  +I  Y  ++ G+CRAG +
Sbjct: 410 VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  +   +  +G + +  T+ I+I   C++G ++ A +L   + G G  +PD  +Y +
Sbjct: 470 EAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG-CSPDGCTYNT 528

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  G+  +     A   LQ+ML  G   + +T  +LV  L
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/492 (28%), Positives = 245/492 (49%), Gaps = 6/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM   G+         +INS+  +     A  +  +I + G +P    +  ++  L 
Sbjct: 91  LSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLC 150

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G +PNV TY  L+  LCK    + A +LL  M    C PD V
Sbjct: 151 VEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV 210

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            YT+I+ S+CK  QV EA  L  +  G G+S     Y +LI+ LC   + +    LL +M
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 270

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++  I P+V+ +ST++ +LC  G +  +  ++  M +RG  PN+ ++ +L+ G+ L    
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 330

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ M+  G+ PNV++Y+TLI+G C    MD+A  +  +M +    PN  TY+ L
Sbjct: 331 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 390

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +      G L  A  +++ M+++G  P++  Y  ++  LC+ +   +A +L++ +   N 
Sbjct: 391 MHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 449

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   +   I G+C  G ++ A  +   +      PN+ TY  +++GL R   + EA +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 509

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E++  G   +  TYNTI  G+ +    + A QLL +ML  G   D  T  +++   C
Sbjct: 510 LFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC 569

Query: 492 KQGKVNNAIQLL 503
                 +  Q+L
Sbjct: 570 DDKLDQSVKQIL 581



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 214/406 (52%), Gaps = 6/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + +I    +L  +M  EG   +   + ++IN   +VG    A+++   + +  
Sbjct: 145 LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN 204

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V +Y  I+D+L  + + +    ++S M   G+ P++FTY  L+ +LC         
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 264

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGL 175
            LL +M N    PD V ++T+V ++CK G++ EA ++  M    GV      YNAL++G 
Sbjct: 265 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C + +++EA  +   MV  G  PNVI+Y+T+I+  C +  ++ +  +  +M  +   PN 
Sbjct: 325 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+    +G R  +A  L++ M+  G +P++  Y  L+  LC    +DEA+++   
Sbjct: 385 VTYNTLMHXCHVG-RLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +E ++  P++  Y+ +IDG  +AG L  A  I++ + S G  PNV  YT M+  LC+  +
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 503

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             +A+ L  +M    C P+  T+NT  +GL        A++LL +M
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 183/360 (50%), Gaps = 6/360 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++     L  +M  +G+S     + S+I+S   +   +    +  ++    
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V I++ ++DAL  E + +  + +   M   G+EPNV TYN L+   C  + +D A 
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           K+   M + G AP+ +SY T+++  CK+ ++++A  L               YN L++  
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-X 393

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++++A  L  EMV  G  P++ TY  ++  LC   +++ ++ +L  +     +P+I
Sbjct: 394 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 453

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T ++ G    G    A D+++ +  +G  PNV  Y+ +I+GLC  G +DEA  +  +
Sbjct: 454 QIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 513

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+ N C P+  TY+ +  G  +    L A Q+   M++ G S +V   T +V++LC + +
Sbjct: 514 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL 573



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 171/359 (47%), Gaps = 1/359 (0%)

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++++   S   +   ++ +L    +M      P+   F  LL       +      L N+
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M   G  P+V   + LI+  C    +  A SV  ++ +    P+  T++ LI G    G 
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  ++++MI  G  PNVV Y  ++  LC+    + A  L+  M   NC P+ V + +
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC   +V  A  L  +M      P+I TY  L+  L  +   K    L+ ++    
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I  ++V ++T++  +C+ G + EA  ++  M+I G + + +T+N ++  +C Q +++ A+
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           ++ D +   G + P++ISY +L+ G C    M +A    ++M  + + PN  T+N L+ 
Sbjct: 335 KVFDTMVHNG-YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH 392



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 36/226 (15%)

Query: 372 PP--NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           PP  ++++ N F         +D A+   ++M      P+   +N LL  + +  +    
Sbjct: 29  PPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTV 88

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           F L  +++  GI  ++ T N +++  C    +  AF +L K+L  G + D  TF  +I  
Sbjct: 89  FSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRG 148

Query: 490 YCKQGKVNNAIQLLDRIRG----------------------------------GGEWNPD 515
            C +GK+ +A+ L D++ G                                   G   PD
Sbjct: 149 LCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPD 208

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ YTS++  +C    + EAF    KM+ +GI P+  T+  L+ SL
Sbjct: 209 VVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 254


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 267/510 (52%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  +    + LLK  C+  R D A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY  ++ S+C  G+  +A +L      G       V  YN +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  KE  + +A  L  EMV RGI P+++TYS+++ +LC    ++ +   L QM  +G  
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  ++ +L+ GY   G+  EA  ++  M R+  LP+VVA +TL+  LC  G + EA  V
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P+V +Y+ +++G+A  G L+  + +++ M+ +G +P +  +  ++K    
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      P+ VT+ T I  LC  G++D AM+  +QM     +P+   
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+ G      + +A EL++EI   G++L+IV + +I++ +C+ G V++A  +    +
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTV 528

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   DA+ +N+++  YC  GK+  A+++ D +   G   P+++ Y +L+ G C  G +
Sbjct: 529 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNVVGYGTLVNGYCKIGRI 587

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML +GI P+   +N+++  LF
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLF 617



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 267/559 (47%), Gaps = 16/559 (2%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALK-MFYRIREFGLKPTVKIYNHILD 73
           Q L   ++V+ +  S      ++  +      ++AL  + +R  E G  P V  YN +L 
Sbjct: 138 QLLRTGLRVDAIIASH-----LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLK 192

Query: 74  ALLAENRFSMINPIYSNMKRDGM--EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +L  + +    + +   M   G    P+V  YN ++    K   V+ A  L  EM  +G 
Sbjct: 193 SLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 252

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            PD V+Y+++V ++CK   +++A   L      GV      YN LI G     + +EA  
Sbjct: 253 PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +  EM  + I P+V+  +T++ SLC  G ++ +  +   M ++G NP++ S+T +L GY 
Sbjct: 313 VFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYA 372

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G   + +DL++ M+ +G  P +  ++ LI    + G +D+A+ +  +M ++   P+V 
Sbjct: 373 TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVV 432

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY  +I    + G +  A + +N+MI  G  P+  AY C+++  C +    +A  LI ++
Sbjct: 433 TYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEI 492

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  + V F + I  LC  GRV  A  + D        P+   YN L+DG   V ++
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           ++A  +   +   GI+ N+V Y T+++G C+ G + E   L  +ML +G K   I +NII
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612

Query: 487 IYAYCKQGK-VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           I    + G+ V   ++  +    G   N    +Y+ +L G+  +    EA    +++   
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNK--CTYSIVLRGLFKNRCFDEAIFLFKELRAM 670

Query: 546 GICPNFATWNVLVRSLFSN 564
            +  +  T N ++  +F  
Sbjct: 671 NVKIDIITLNTMIAGMFQT 689



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 261/555 (47%), Gaps = 8/555 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P +  Y+ ++ A
Sbjct: 206 LLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 265

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L               M   G+ P+ +TYN L+       +   A ++  EM  +   PD
Sbjct: 266 LCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 325

Query: 135 AVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+  T++ S+CK G+++EAR+    +AM+     V  Y  ++NG   +  + +   L  
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M+  GI P + T++ +I +  + G ++ ++ I  +M   G  P++ ++ +++      G
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A + +N+MI +G +P+  AY  LI G C++GS+ +A  +  ++  N    ++  + 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+   K G ++ A  I++  ++ G  P+ V Y  ++   C      +A  + + M   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN V + T + G C  GR+D  + L  +M Q    P+   YN ++DGL    R   A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                E+ + GI +N  TY+ +L G+ +     EA  L  ++     K+D IT N +I  
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +V  A  L   I   G   P  ++Y+ ++  +   G ++EA      M N G  P
Sbjct: 686 MFQTRRVEEAKDLFASISRSG-LVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 744

Query: 550 NFATWNVLVRSLFSN 564
           +    N +VR L   
Sbjct: 745 DSRLLNHVVRELLKK 759



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/533 (23%), Positives = 251/533 (47%), Gaps = 40/533 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  +  L+QM  +GV      + ++I  Y   G  ++A+++F  +R   + P V   N 
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNT 331

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTY--------------------------- 103
           ++ +L    +      ++  M   G  P+VF+Y                           
Sbjct: 332 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 391

Query: 104 --------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
                   N+L+KA      +D A  +  EM + G  P  V+Y T+++++C++G++++A 
Sbjct: 392 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAM 451

Query: 156 E-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E        GV      Y+ LI G C    + +A  L+ E+++ G+  +++ + +II++L
Sbjct: 452 EKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C +G V  +  I       G +P+   +  L+ GY L G+  +A  +++ M+  G  PNV
Sbjct: 512 CKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y TL++G C  G +DE +S+  +M +    P+   Y+ +IDG  +AG  + A   ++ 
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  +G + N   Y+ +++ L +N  F +A  L +++   N   + +T NT I G+    R
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V+ A  L   + +   +P   TY+ ++  L++   V+EA ++ + ++  G + +    N 
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  + +   +V A   L K+      L+ +T  +++  +  +G     I+ L
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 804



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 195/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   +    + LLKG+    RT E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +Y+ L+  LC+ G   +A  +   M E    C P+V  Y+ 
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G++  A  ++  M+  G  P++V Y+ +V  LC+     +A + + +M  + 
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+  T+N  I G    G+   A+++  +M++   LP++   N L+  L +  ++KEA 
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   ++ +Y  +L+G    G +V+   L   ML +G      TFN++I AY
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 406

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   P +++Y +++  +C  G M +A     +M+++G+ P+
Sbjct: 407 ANCGMLDKAMIIFNEMRDHG-VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              ++ L++   ++   L    ++ +IM N
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNN 495



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 144/327 (44%), Gaps = 5/327 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV   +  +  +I  +   G   +A ++   I   G++  +  + 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G+ P+   YN+L+   C   +++ A ++   M + 
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  +       +YN +I+GL +  +   A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  N  TYS ++  L      + ++ +  ++       +I +  +++ G
Sbjct: 626 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+  + R G +P  V YS +I  L   G ++EA  +   M+   C P+
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM 331
               + ++    K   ++ A    +++
Sbjct: 746 SRLLNHVVRELLKKNEIVRAGAYLSKI 772


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 171/565 (30%), Positives = 276/565 (48%), Gaps = 45/565 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            + S  R  + E   K++  + + GL P    YN ++ A   +   ++ +  +  ++  G
Sbjct: 150 ALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESG 209

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           M+ + +T N LL   C+ + +  A  LL+ M   GC  +  SYT ++  +C+   V EA 
Sbjct: 210 MQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREAL 269

Query: 156 ELA-MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L  M    G S+    Y  LI GLCKE +I +A  LL EM  RG+ P+V TY+ +I   
Sbjct: 270 VLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGY 329

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G ++ +LGI   M   GCNP+  ++ SL+ G L GG+  EA +L N  I  GF P V
Sbjct: 330 CKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYG-LCGGKLDEAEELLNGAIARGFTPTV 388

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + ++ LI+G C    +D+A+ V   M  ++C  ++  Y  LI+   K   L  A +  N 
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 331 MISNGCSPNVVAYTCMVKVLC-----------------------------------QNNM 355
           M +NG +PNVV YT ++   C                                   Q+  
Sbjct: 449 MFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK 508

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H+A +LI KM  +   P  +T+ T I+G C     D A +L + M+Q    P+   YN 
Sbjct: 509 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 568

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L D L +  R +EA+  +    + G+ L  VTY +++ G  +AG    A  L+ KM+ EG
Sbjct: 569 LTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            K D  T+++++ A CKQ K+N A+ +LD++   G    +I++YT ++  +   G    A
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV-KCNIVAYTIIISEMIKEGKHDHA 684

Query: 536 FIYLQKMLNEGICPNFATWNVLVRS 560
                +M++ G  P+  T+ V + S
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISS 709



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 162/632 (25%), Positives = 286/632 (45%), Gaps = 90/632 (14%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL  M + G   +E  +  +I          +AL + + +   G    +  Y  ++  L
Sbjct: 235 WLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGL 294

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E R      +   M   G+ P+V+TYN ++   CK+ R+  A  +   M   GC PD 
Sbjct: 295 CKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDD 354

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWL--- 187
            +Y +++  +C  G+++EA EL     A  F   V  +  LING CK  +I++A  +   
Sbjct: 355 WTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSN 413

Query: 188 --------------------------------LCEMVDRGIDPNVITYSTIISSLCDVGN 215
                                           L EM   G+ PNV+TY++II   C VG 
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGM 473

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  +L +   M   GC+PN  ++ SL+ G +   + H+A  L  +M  +G  P V+ Y+T
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTT 533

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPN------------------------------- 304
           LI G C     D A  +   ME+N   P+                               
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVL 593

Query: 305 -VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
              TY++L+DGF+KAGN   A+ +  +M++ GC  ++  Y+ +++ LC+    ++A S++
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSIL 653

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M       N V +   I  +   G+ D A  L ++M      P+ TTY   +    ++
Sbjct: 654 DQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKI 713

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R++EA  L+ E+E+ G+  ++VTYN  ++G    G +  AF  L +M+    + +  T+
Sbjct: 714 GRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTY 773

Query: 484 NIIIYAYCKQG----------------KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
            +++  + K                  ++N   QLL+R+   G  NP +++Y+S++ G C
Sbjct: 774 WLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG-LNPTVVTYSSIIAGFC 832

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +  ++EA + L  ML + I PN   + +L++
Sbjct: 833 KATRLEEACVLLDHMLGKDISPNEEIYTMLIK 864



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 242/521 (46%), Gaps = 18/521 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +KC +   +  L +M   G++ +   + S+I+ Y +VG+   AL++F  +   G
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  ++  L+ + +      + + M+ DG+ P V TY  L++  CK +  D A+
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 548

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKE 178
           +L   M   G  PD  +Y  +  ++CK G+ EEA    +R G  ++   Y +L++G  K 
Sbjct: 549 RLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              + A  L+ +MV+ G   ++ TYS ++ +LC    +  +L IL QM V G   NI ++
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T ++   +  G+   A  L+N MI  G  P+   Y+  I   C  G ++EA  +  +ME 
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMER 728

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+V TY+  I+G    G +  A     RM+   C PN   Y  ++K   + ++ + 
Sbjct: 729 DGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 359 AH----------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            +                 L+E+M      P  VT+++ I G C   R++ A  LLD M 
Sbjct: 789 HYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
             +  PN   Y  L+     +    +A   VT++ + G Q  + +Y+ ++ G+C  G   
Sbjct: 849 GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            A  L   +L      + + + I+     K G V+   QLL
Sbjct: 909 RAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/581 (26%), Positives = 263/581 (45%), Gaps = 28/581 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + LL      G + +   F ++IN Y +    + AL++   +     K  ++ Y 
Sbjct: 368 KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYG 427

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L+ + R        + M  +G+ PNV TY  ++   CK   V  A ++   M ++
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHE 487

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+A +Y +++  + +  ++ +A  L  +        GV  Y  LI G CK+H+ + A
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 547

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L   M   G+ P+   Y+ +  +LC  G  E +   L +   +G      ++TSL+ G
Sbjct: 548 FRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDG 604

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G T  A+ L  +M+ EG   ++  YS L+  LC    ++EA+S+  QM  +    N
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y+ +I    K G    A  ++N MIS+G  P+   YT  +   C+     +A  LI 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   P+ VT+N FI G    G +D A   L +M    C PN  TY  LL   L+++
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 425 RVKEAF----------------ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            +   +                +L+  + K G+   +VTY++I+ G C+A  + EA  LL
Sbjct: 785 LINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGIC 527
             ML +    +   + ++I   C       A+  + D I  G  + P + SY  L+ G+C
Sbjct: 845 DHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFG--FQPQLESYHYLIVGLC 902

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           + G    A      +L      N   W +L   L    GH+
Sbjct: 903 DEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLL-KAGHV 942



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 203/474 (42%), Gaps = 46/474 (9%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN-KGCAPDAVSYTTIVSSICKLGQ 150
           +R G      ++  LL+ L +        KL++ M +  G A D       + +I ++G 
Sbjct: 78  RRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVG- 136

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                    R       YN  +  L +    E    L   +V  G+ P+ +TY+T+I + 
Sbjct: 137 -------GKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAY 189

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G++  +                H +  LL+                     G   + 
Sbjct: 190 CKKGSLAIA----------------HRYFCLLR-------------------ESGMQMDT 214

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
              + L+ G C    + +A  +   M    C  N  +Y+ LI G  +A  +  A  +   
Sbjct: 215 YTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFM 274

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+ +GCS N+  YT ++K LC+    H A  L+++M      P+  T+N  I G C  GR
Sbjct: 275 MVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGR 334

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A+ +   M+Q  C P+  TYN L+ GL    ++ EA EL+      G    ++T+  
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTN 393

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++G C+A  + +A ++   M+    KLD   + ++I    K+ ++  A + L+ +   G
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              P++++YTS++ G C  G +  A    + M +EG  PN  T+  L+  L  +
Sbjct: 454 -LAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 266/490 (54%), Gaps = 6/490 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    +  IL +LL   ++     +   M+ +G++P+  T N+L+    +   +  ++ +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
             ++  KG  PDAV++T ++  +C  G+V +A     + +A  F      Y  LINGLC+
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             + + A  LL  +  + + PNV+ YSTII S+C    V  +  +  +M  +  +P++ +
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           ++SL+ G+ + G+   A DL+NRMI +   PNV  +S LI G C  G + EA +V   M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           + +   +V TY++L+DG+     +  A  ++N M   G +P+V +Y+ M+   C+  M  
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  L E+M  +   PN VT+N+ + GLC  GR   A++L+D+M       NI TYN +L
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D + + N V +A  L+T+I++ GIQ +I TY  +++G+C+ G + +A ++   +L++G  
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            +  T+  +I  +C +G  +  + +L +++  G   P+ I+Y  L+  +       +A  
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG-CIPNAITYEILIHSLFEKDENDKAEK 534

Query: 538 YLQKMLNEGI 547
            L++M+  G+
Sbjct: 535 LLREMIARGL 544



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 260/485 (53%), Gaps = 9/485 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL--LAENRFSMINPIYSN 90
           F  ++ S  +    + AL +  ++   G+KP     N +++    L   +FS    +++ 
Sbjct: 61  FGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSF--SVFAK 118

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           + + G  P+  T+ IL+K LC    V  A     ++  +G   D VSY T+++ +C++G+
Sbjct: 119 ILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGE 178

Query: 151 VEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            + A +L  R         V +Y+ +I+ +CK+  + +AF L CEMV + I P+V+TYS+
Sbjct: 179 TKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSS 238

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS  C VG ++ ++ +  +M     NPN+++F+ L+ G+   G+  EA ++   M+++ 
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKN 298

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              +VV Y++L+ G C    +++A S+   M +    P+V +YS +I+GF K   +  A 
Sbjct: 299 VKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAM 358

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++  M      PNVV Y  +V  LC++     A  L+++M     P N +T+N+ +  +
Sbjct: 359 KLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAI 418

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C    VD A+ LL ++K+    P+I TY  L++GL +V R+ +A ++  ++   G   NI
Sbjct: 419 CKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNI 478

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TY ++++G C  G   E   +L KM   G   +AIT+ I+I++  ++ + + A +LL  
Sbjct: 479 YTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLRE 538

Query: 506 IRGGG 510
           +   G
Sbjct: 539 MIARG 543



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 207/406 (50%), Gaps = 5/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K E+    Y   ++  +G    +  + ++IN   RVG  + A+++  R+    
Sbjct: 134 LIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKL 193

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V +Y+ I+D++  +   +    +Y  M    + P+V TY+ L+   C   ++  A 
Sbjct: 194 VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAV 253

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVSV----YNALINGL 175
            L   M +    P+  +++ ++   CK G+V EA+  LA+     V +    YN+L++G 
Sbjct: 254 DLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGY 313

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ +A  L   M  RG+ P+V +YS +I+  C +  V+ ++ +  +M  +   PN+
Sbjct: 314 CLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNV 373

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G    GRT  A +L + M   G   N++ Y++++  +C N  +D+A+ +  +
Sbjct: 374 VTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTK 433

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ++E    P++ TY+ LI+G  K G L  A +++  ++  G SPN+  YT ++   C    
Sbjct: 434 IKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGF 493

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           F +  +++ KM    C PN +T+   I  L      D A KLL +M
Sbjct: 494 FDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREM 539



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 194/377 (51%), Gaps = 2/377 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P  I +  I+ SL      +T+L +  QM   G  P+  +   L+  +   G    +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           + +++++G+ P+ V ++ LI GLC  G + +A+    ++       +  +Y  LI+G  +
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G    A Q+  R+      PNVV Y+ ++  +C++ + + A  L  +M  +   P+ VT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +++ I G C  G++ +A+ L ++M      PN+ T++ L+DG  +  +V+EA  ++  + 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K  ++L++VTYN+++ G C    V +A  L   M   G   D  +++I+I  +CK   V+
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A++L + +     + P++++Y SL+ G+C SG    A   + +M + G   N  T+N +
Sbjct: 356 EAMKLFEEMHCKQIF-PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSI 414

Query: 558 VRSLFSNLGHLGPVYIL 574
           + ++  N  H+    +L
Sbjct: 415 LDAICKN-NHVDKAIVL 430



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 171/321 (53%), Gaps = 5/321 (1%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           +M  + +S     + S+I+ +  VG  + A+ +F R+    + P V  ++ ++D    E 
Sbjct: 223 EMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEG 282

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
           +      + + M +  ++ +V TYN L+   C   +V+ A  L   M  +G  PD  SY+
Sbjct: 283 KVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYS 342

Query: 140 TIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
            +++  CK+  V+EA +L       +    V  YN+L++GLCK  +   A  L+ EM DR
Sbjct: 343 IMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDR 402

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G   N+ITY++I+ ++C   +V+ ++ +L ++  +G  P+I ++T L+ G    GR  +A
Sbjct: 403 GQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDA 462

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             ++  ++ +G+ PN+  Y++LI+G C+ G  DE +++  +M++N C PN  TY  LI  
Sbjct: 463 QKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHS 522

Query: 315 FAKAGNLLGASQIWNRMISNG 335
             +      A ++   MI+ G
Sbjct: 523 LFEKDENDKAEKLLREMIARG 543



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + L   M   GV+     +  +IN + ++ + ++A+K+F  +    + P V  YN
Sbjct: 318 QVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYN 377

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M   G   N+ TYN +L A+CKNN VD A  LL ++  K
Sbjct: 378 SLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEK 437

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +YT +++ +CK+G++++A++     L   +   +  Y +LING C +   +E 
Sbjct: 438 GIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEG 497

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             +L +M D G  PN ITY  +I SL +    + +  +L +M  RG
Sbjct: 498 LAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 150/481 (31%), Positives = 250/481 (51%), Gaps = 26/481 (5%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           +  M+R+G  PNV TYN ++   CK  R D A+  L  MG KG  P+ +++  I++ +C+
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 148 LGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
            G+++E  E+ +       V     YN L+NG CKE    +A  L  EMV  G+ PNV+T
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+++I+S+C  GN+  ++    QM VRG  PN  ++T+++ G+   G   EA  + N M 
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R GF+P++V Y+ LI+G C  G M+EA+ +   M      P+V +YS +I GFA+   L 
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A Q+   MI     P+ V Y+ +++ LC+     +A  + ++M     PP+  T+ T I
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
              C  G ++ A+ L D+M Q   LP+  TYN L++GL +  R KEA  L+ ++      
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSI 365

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            + VTYNT++   C                IE     A+     +  +C +G ++ A Q+
Sbjct: 366 PSAVTYNTLIENCCN---------------IEFKSAVAL-----VKGFCMKGLMDEADQV 405

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + +       P+   Y  ++ G C  G + +A+   ++M++    P+  T   LV++LF
Sbjct: 406 FESMINKNH-KPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALF 464

Query: 563 S 563
           +
Sbjct: 465 T 465



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 245/497 (49%), Gaps = 46/497 (9%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
            L+ F  +   G  P V  YN ++D      R         +M   G+EPN+ T+N+++ 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVY 168
            LC++ R+    ++LVEM  KG  PD V+Y T+V                          
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLV-------------------------- 95

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
               NG CKE    +A  L  EMV  G+ PNV+TY+++I+S+C  GN+  ++    QM V
Sbjct: 96  ----NGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHV 151

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG  PN  ++T+++ G+   G   EA  + N M R GF+P++V Y+ LI+G C  G M+E
Sbjct: 152 RGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEE 211

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ +   M      P+V +YS +I GFA+   L  A Q+   MI     P+ V Y+ +++
Sbjct: 212 AIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQ 271

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+     +A  + ++M     PP+  T+ T I   C  G ++ A+ L D+M Q   LP
Sbjct: 272 GLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLP 331

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH--------------- 453
           +  TYN L++GL +  R KEA  L+ ++       + VTYNT++                
Sbjct: 332 DAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVK 391

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C  G++ EA Q+   M+ +  K +   +N+II+ +C+ G V  A +L   +    ++ 
Sbjct: 392 GFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMV-HVDFV 450

Query: 514 PDIISYTSLLWGICNSG 530
           P  ++  +L+  +   G
Sbjct: 451 PHTVTVLALVKALFTEG 467



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 246/514 (47%), Gaps = 20/514 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
             ++M+  G   +   + ++I+ Y ++   ++A      +   GL+P +  +N I++ L 
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R    + +   M R G  P+  TYN L+   CK      A  L  EM   G +P+ V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT++++S+CK G +  A E   +            Y  +ING  ++  ++EA+ +L EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P+++TY+ +I+  C +G +E ++G+L  M  +G  P++ S+++++ G+      
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +   MI +  LP+ V YS+LI GLC    + EA  +  +M     PP+  TY+ L
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ + K G+L  A  + + MI  G  P+ V Y  ++  L +     +A  L+ K+ +++ 
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364

Query: 372 PPNTVTFNTFI---------------KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            P+ VT+NT I               KG C  G +D A ++ + M      PN   YN +
Sbjct: 365 IPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  R+  V +A++L  E+       + VT   ++  +   GM  E  +++G +L    
Sbjct: 425 IHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCK 484

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
             DA    +++    K+G ++    LL  +   G
Sbjct: 485 LTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDG 518



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 162/325 (49%), Gaps = 2/325 (0%)

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
            +  M R G LPNVV Y+T+I G C     DEA      M      PN+ T++ +I+G  
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           + G L   S++   M   G  P+ V Y  +V   C+   FHQA  L  +M      PN V
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ + I  +C  G ++ AM+  DQM      PN  TY  +++G  +   + EA+ ++ E+
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            + G   +IVTYN +++G C  G + EA  LL  M+ +G   D ++++ II  + +  ++
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A Q+   + G     PD ++Y+SL+ G+C    + EA    Q+ML   + P+  T+  
Sbjct: 245 DRAFQMKVEMIGKSVL-PDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTT 303

Query: 557 LVRSLFSNLGHLGPVYILDDIMANK 581
           L+ + +   G L     L D M  K
Sbjct: 304 LINA-YCKEGDLNKALHLHDEMIQK 327



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 184/412 (44%), Gaps = 47/412 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
              QM V G+  +E  + ++IN + + GL ++A ++   +   G  P++  YN +++   
Sbjct: 145 FFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHC 204

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +  +M   G+ P+V +Y+ ++    +N  +D A+++ VEM  K   PDAV
Sbjct: 205 VLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAV 264

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +Y+                              +LI GLC++ ++ EA  +  EM+   +
Sbjct: 265 TYS------------------------------SLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+  TY+T+I++ C  G++  +L +  +M  +G  P+  ++  L+ G     R+ EA  
Sbjct: 295 PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARR 354

Query: 257 LWNRMIREGFLPNVVAYSTLIH---------------GLCSNGSMDEAVSVSYQMEENSC 301
           L  ++  +  +P+ V Y+TLI                G C  G MDEA  V   M   + 
Sbjct: 355 LLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNH 414

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN   Y+ +I G  + GN+L A +++  M+     P+ V    +VK L    M  + + 
Sbjct: 415 KPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNE 474

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGC-GRVDWAMKLLDQMKQYECLPNITT 412
           +I  +   +C       +  +  +    G +D    LL +M +   +P+  T
Sbjct: 475 VIGDI-LRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 128/239 (53%), Gaps = 1/239 (0%)

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           + +  M  NGC PNVV Y  M+   C+     +A   +  M  +   PN +TFN  I GL
Sbjct: 4   RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  GR+    ++L +M +   +P+  TYN L++G  +     +A  L  E+ + G+  N+
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTY ++++ +C+AG +  A +   +M + G   +  T+  II  + +QG ++ A ++L+ 
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +   G + P I++Y +L+ G C  G M+EA   LQ M+ +G+ P+  +++ ++     N
Sbjct: 184 MTRSG-FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 106/181 (58%), Gaps = 4/181 (2%)

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             ++   +M++  CLPN+ TYN ++DG  ++ R  EAF  +  +   G++ N++T+N I+
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGE 511
           +G+CR G + E  ++L +M  +G   D +T+N ++  YCK+G  + A+ L  + +R G  
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG-- 118

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
            +P++++YTSL+  +C +G +  A  +  +M   G+CPN  T+  ++   F+  G L   
Sbjct: 119 LSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIING-FAQQGLLDEA 177

Query: 572 Y 572
           Y
Sbjct: 178 Y 178


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 282/569 (49%), Gaps = 45/569 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           +F ++IN++ +    + A+ +F ++ + G+ P V  YN+I+  L    R          M
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKM 317

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            ++ + P++ TY++ +  L K  ++D A  +L EM   G  P+ V Y T++   CK+G +
Sbjct: 318 VKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNI 377

Query: 152 EEARELAMR---FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            EA  L +R      G+S      N+LI G CK  +I +A  +L EM+ RG+  N  ++S
Sbjct: 378 SEA--LKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFS 435

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +I+ LC      T+L  + +M +R   PN    T+L+ G    G+  EA +LW R++ +
Sbjct: 436 MVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK 495

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVS--------------VSY---------------- 294
           GF+PN+V  + LIHGLC  G+M E +               ++Y                
Sbjct: 496 GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEG 555

Query: 295 -----QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
                +M +    P++ T++ L+ G   A  +  AS++W+    NG  PNV  Y  M+  
Sbjct: 556 FELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDG 615

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C+ N   +  +L+ ++  +    N+V +N+ I+  C  G ++ A +L D MK    L +
Sbjct: 616 YCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLS 675

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             TY+ L+ GL  +  V +A  L+ E+ K G+  N+V Y TI+ G  + G + +   +L 
Sbjct: 676 CATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQ 735

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M       +  T+ I+I  +CK GK   A +LL+ +   G   PD ++Y +   G+C  
Sbjct: 736 EMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGIL-PDAVTYNAFTNGLCKE 794

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G ++EAF    +M +  +C +  T+  L+
Sbjct: 795 GKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 158/537 (29%), Positives = 274/537 (51%), Gaps = 7/537 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A  +F  + + GL P++K    +L +L+  N       +Y  +   G+ P+V  ++ ++ 
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGS 163
           A CK +R D A  L  +M   G AP+ V+Y  I+  +CK G+++EA     + +  +   
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            +  Y+  INGL K  KI+EA  +L EM + G  PN + Y+T+I   C +GN+  +L I 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +G +PN  +  SL++G+    +  +A ++   MI  G   N  ++S +I+ LC  
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
                A+    +M   +  PN    + L+ G  KAG    A ++W R++  G  PN+V  
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+     +   L+  M       + +T+NT I G C  G+V    +L ++M +
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+I T+N LL GL   +++ EA  L  E +K G   N+ TY  ++ G C+A  V E
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEE 624

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
              LL +++ +  +L+++ +N +I AYC  G +N A +L D ++  G       +Y+SL+
Sbjct: 625 GENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL-LSCATYSSLM 683

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            G+CN G + +A   L +M  EG+ PN   +  ++   +S LG +  V I+   M++
Sbjct: 684 HGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGG-YSKLGQMNKVNIVLQEMSS 739



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 265/530 (50%), Gaps = 6/530 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D      ++M  E VS S   +   IN   ++   ++A  +   + E G
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P   +YN ++D        S    I  +M   G+ PN  T N L++  CK++++  A 
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAE 416

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +L EM  +G   +  S++ +++ +C   +   A    RE+ +R       +   L++GL
Sbjct: 417 NVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGL 476

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K  EA  L C ++ +G  PN++T + +I  LC  GN++ +L +L  M  RG   + 
Sbjct: 477 CKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDR 536

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G    G+  E  +L   M+++G  P++  ++ L+HGLC+   +DEA  + ++
Sbjct: 537 ITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHE 596

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            ++N   PNV TY  +IDG+ KA  +     + N ++S     N V Y  +++  C N  
Sbjct: 597 CKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGN 656

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            + A  L + M       +  T+++ + GLC  G VD A  LLD+M++   LPN+  Y  
Sbjct: 657 MNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTT 716

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++ G  ++ ++ +   ++ E+    I  N  TY  ++ G C+ G   EA +LL +M  +G
Sbjct: 717 IIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG 776

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
              DA+T+N      CK+GKV  A ++ D +  G     D I+YT+L+ G
Sbjct: 777 ILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVC-LDEITYTTLIDG 825



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 248/512 (48%), Gaps = 32/512 (6%)

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           H+         F     ++S + + G+ P++ T   LL +L K N +  +Y++   +   
Sbjct: 191 HVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLG 250

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  PD                              V +++ +IN  CK H+ ++A  L  
Sbjct: 251 GIIPD------------------------------VHLFSTMINAFCKGHREDDAIGLFS 280

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M   G+ PNV+TY+ II  LC  G ++ +     +M     +P++ +++  + G +   
Sbjct: 281 KMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLE 340

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  EA+ +   M   GF+PN V Y+TLI G C  G++ EA+ +   M      PN  T +
Sbjct: 341 KIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLN 400

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +LI GF K+  +  A  +   MI  G   N  +++ ++  LC    F  A   I +M   
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLR 460

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           N  PN     T + GLC  G+   A++L  ++     +PNI T N L+ GL +   ++E 
Sbjct: 461 NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            +L+ ++ + G+  + +TYNT++ G C+ G V E F+L  +M+ +G + D  TFN++++ 
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            C   K++ A +L    +  G + P++ +Y  ++ G C +  ++E    L +++++ +  
Sbjct: 581 LCNADKIDEASRLWHECKKNG-YVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLEL 639

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           N   +N L+R+   N G++   + L D M ++
Sbjct: 640 NSVVYNSLIRAYCIN-GNMNAAFRLRDDMKSR 670


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 257/478 (53%), Gaps = 11/478 (2%)

Query: 87  IYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           +Y  M  RD + P  FT+ +  +ALC+  R D A  LL  M   GC PDAV Y T++ ++
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204

Query: 146 CKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C  G V EA  L      M   + V+ ++ ++ G+C   ++ EA  L+  M+ +G  P V
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY  ++  LC V   + +  +LG++       N+  F +++ G L  G+  EA++L+  
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYET 320

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P+   YS L+HGLC  G +  AV +  +ME+    PNV TY+ ++  F K G 
Sbjct: 321 MGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGM 380

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
                 +   M + G + N   Y  M+  LC++    +A  LI++M  + C P+  ++NT
Sbjct: 381 WDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNT 440

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC   +++ A  + + + +   + N  TYN ++  LLR  R ++A  L  E+   G
Sbjct: 441 IIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHG 500

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             L++V+YN ++  +C+ G V  +  LL +M  +G K + +++NI+I   CK+ +V +A+
Sbjct: 501 CSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDAL 560

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +L  ++   G   PDI++Y +L+ G+C  G M  A   L+K+ NE + P+  T+N+L+
Sbjct: 561 ELSKQMLNQG-LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILI 617



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 243/465 (52%), Gaps = 1/465 (0%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R+G A++AL +   +   G  P   +Y  ++ AL  +   +    + + M   G   +V 
Sbjct: 171 RLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN 230

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           T++ +++ +C   RV  A +L+  M  KGC P  ++Y  ++  +C++ Q +EAR +  R 
Sbjct: 231 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 290

Query: 162 GS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
               V ++N +I G   E K+ EA  L   M  +G  P+  TYS ++  LC +G + +++
Sbjct: 291 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAV 350

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L +M  +G  PN+ ++T +L  +   G   +   L   M  +G   N   Y+ +I+ L
Sbjct: 351 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 410

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C +G MDEA+ +  +M    C P++ +Y+ +I        +  A  ++  ++  G   N 
Sbjct: 411 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 470

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + Y  ++  L ++  +  A  L ++M    C  + V++N  IK +C  G VD ++ LL++
Sbjct: 471 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 530

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +    PN  +YN L+  L +  RV++A EL  ++   G+  +IVTYNT+++G+C+ G 
Sbjct: 531 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 590

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +  A  LL K+  E    D IT+NI+I  +CK   +++A  LL+R
Sbjct: 591 MHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNR 635



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 226/452 (50%), Gaps = 40/452 (8%)

Query: 149 GQVEEARELAM--------RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           G +  AR  A+        R       +      LC+  + +EA  LL  M   G  P+ 
Sbjct: 135 GGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDA 194

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + Y T+I +LCD G V  +  +L +M + GC  ++++F  +++G    GR  EA+ L +R
Sbjct: 195 VLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDR 254

Query: 261 MIREGFLPNVVAYSTLIHGLC-------------------------------SNGSMDEA 289
           M+ +G +P V+ Y  L+ GLC                               + G + EA
Sbjct: 255 MMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEA 314

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +   M    C P+  TYS L+ G  K G +  A ++   M   G +PNVV YT ++  
Sbjct: 315 TELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHS 374

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C+N M+    +L+E+M+ +    N+  +N  I  LC  GR+D AM L+ +M+   C P+
Sbjct: 375 FCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPD 434

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I +YN ++  L    +++EA  +   + + G+  N +TYNTI+H + R G   +A +L  
Sbjct: 435 ICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAK 494

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M++ G  LD +++N +I A CK G V+ ++ LL+ +   G   P+ +SY  L+  +C  
Sbjct: 495 EMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKG-IKPNNVSYNILISELCKE 553

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +++A    ++MLN+G+ P+  T+N L+  L
Sbjct: 554 RRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 146/304 (48%), Gaps = 40/304 (13%)

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +  +  PP   T+        + G    A  +   M  +GC P+ V Y  ++  LC    
Sbjct: 150 VHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGG 209

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +L+ +M    C  +  TF+  ++G+CG GRV  A +L+D+M    C+P + TY  
Sbjct: 210 VTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGF 269

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           LL GL RV +  EA  ++  +     +LN+V +NT++ G    G + EA +L   M ++G
Sbjct: 270 LLQGLCRVRQADEARAMLGRVP----ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT--------------- 520
            + DA T++I+++  CK G++ +A++LL  +   G + P++++YT               
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG-FAPNVVTYTIVLHSFCKNGMWDDT 384

Query: 521 --------------------SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
                                +++ +C  G M EA   +Q+M ++G  P+  ++N ++  
Sbjct: 385 RALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYH 444

Query: 561 LFSN 564
           L +N
Sbjct: 445 LCNN 448



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 8/252 (3%)

Query: 316 AKAGNLLGASQ--IWNRMI-SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           A  G L  A +  ++ RM+  +   P    +    + LC+     +A +L+  MA   C 
Sbjct: 132 ASQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCV 191

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ V + T I  LC  G V  A  LL++M    C  ++ T+++++ G+  + RV+EA  L
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARL 251

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           V  +   G    ++TY  +L G+CR     EA  +LG++     +L+ + FN +I     
Sbjct: 252 VDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV----PELNVVLFNTVIGGCLA 307

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +GK+  A +L + + G     PD  +Y+ L+ G+C  G +  A   L++M  +G  PN  
Sbjct: 308 EGKLAEATELYETM-GLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 366

Query: 553 TWNVLVRSLFSN 564
           T+ +++ S   N
Sbjct: 367 TYTIVLHSFCKN 378



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 139/256 (54%), Gaps = 5/256 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + LL++M  +G++ +   +  +I +  + G  ++A+ +   +R  G  P +  YN I
Sbjct: 382 DDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 441

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +  L    +      ++ N+  +G+  N  TYN ++ AL ++ R   A +L  EM   GC
Sbjct: 442 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 501

Query: 132 APDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHKIEEAFW 186
           + D VSY  ++ ++CK G V+ +     E+A +     +V YN LI+ LCKE ++ +A  
Sbjct: 502 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALE 561

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  +M+++G+ P+++TY+T+I+ LC +G +  +L +L ++     +P+I ++  L+  + 
Sbjct: 562 LSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHC 621

Query: 247 LGGRTHEASDLWNRMI 262
                 +A+ L NR +
Sbjct: 622 KVRLLDDAAMLLNRAM 637



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 12/199 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  +++ + +  EGV  +   + ++I++  R G  + A+++   +   G    V  YN
Sbjct: 450 QMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYN 509

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ A+  +        +   M   G++PN  +YNIL+  LCK  RV  A +L  +M N+
Sbjct: 510 GLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ 569

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G APD V+Y T+++ +CK+G +  A  L  +  +      +  YN LI+  CK   +++A
Sbjct: 570 GLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDA 629

Query: 185 FWLL-------CEMVDRGI 196
             LL       C + DR I
Sbjct: 630 AMLLNRAMAAVCPVGDRRI 648



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 6/126 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGV---SCSEGVFISVINSYRRVGLAEQALKMFYRIR 57
           +I+ + +   +D    LL++M  +G+   + S  + IS +   RRV     AL++  ++ 
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRV---RDALELSKQML 567

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             GL P +  YN +++ L           +   +  + + P++ TYNIL+   CK   +D
Sbjct: 568 NQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLD 627

Query: 118 GAYKLL 123
            A  LL
Sbjct: 628 DAAMLL 633


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 256/494 (51%), Gaps = 7/494 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++AL  F R+      P+   +N +L ++      S +  +   M   G+ P+V+T  I+
Sbjct: 27  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 86

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + +LC  NRVD A+  L ++   G  PDA ++TT++  +C  G++ EA  L  +     F
Sbjct: 87  INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 146

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK+ ++ EAF +  EM+ +GI PN++TY+++I  LC +   +    
Sbjct: 147 QPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTT 206

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++ +M      P++ +  +++      G   EA D+ + MI  G  PNVV Y+ L+ G C
Sbjct: 207 LMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHC 266

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +D AV V   M    C  NV +Y+ LI+G+ K  ++  A  ++  M     +PN V
Sbjct: 267 LRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTV 326

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++  LC       A SL  +M      P+ VT+ T    LC    +D AM LL  +
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +     P+I  Y  +LDG+ R   +++A +L + +   G+Q N+ TYN ++HG+C+ G++
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA +L  +M   G   +  T+N+I   + +  +    I+LL+ +   G ++ D +S T+
Sbjct: 447 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG-FSVD-VSTTT 504

Query: 522 LLWGICNSGGMQEA 535
           LL G+ +  G+ ++
Sbjct: 505 LLVGMLSDDGLDQS 518



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 226/430 (52%), Gaps = 6/430 (1%)

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           S+ T  S       ++EA     R L  +       +N L+  + K         L  +M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              GI P+V T + +I+SLC +  V+ +   L ++   G  P+  +FT+L++G  + G+ 
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L+++MI EGF PNVV Y TLI+GLC +  + EA ++  +M      PN+ TY++L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G  K       + + N M+ +   P+V     +V  LC+  M  +AH +++ M     
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+N  + G C    VD A+K+ D M   +C+ N+ +YN L++G  ++  V +A  
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+ +  +  N VTYNT++HG+C  G + +A  L  +M+  G   D +T+  +    C
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 371

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K   ++ A+ LL  I G   W+PDI  YT++L G+C +G +++A      + ++G+ PN 
Sbjct: 372 KNRHLDKAMALLKAIEGSN-WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 430

Query: 552 ATWNVLVRSL 561
            T+N+++  L
Sbjct: 431 WTYNIMIHGL 440



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/616 (25%), Positives = 285/616 (46%), Gaps = 76/616 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +M  +G+S +   + S+I+   ++   +    +   + +  + P V   N ++DAL 
Sbjct: 172 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 231

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   +  + +   M   G+EPNV TYN L+   C  N VD A K+   M +K C  + +
Sbjct: 232 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 291

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T+++  CK+  V++A  L               YN LI+GLC   ++++A  L  EM
Sbjct: 292 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 351

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V RG  P+++TY T+   LC   +++ ++ +L  +     +P+I  +T++L G    G  
Sbjct: 352 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 411

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A DL++ +  +G  PNV  Y+ +IHGLC  G + EA  +  +M +N C PN  TY+ +
Sbjct: 412 EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLI 471

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV-------------KVLCQN----- 353
             GF +    L   ++   M++ G S +V   T +V             ++LC+      
Sbjct: 472 TRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSR 531

Query: 354 ----------------------------NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
                                       N    A S   +M   + PP+TV F   +  +
Sbjct: 532 PSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI 591

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
                    + L  QM  +   P++ T N L++    + R+  AF ++ ++ K G Q ++
Sbjct: 592 AKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDV 651

Query: 446 VTYNTILHGVCR---AGMVVEAF-------------------QLLGKMLIEGTKLDAITF 483
           VTY T+++G+C+    G+  + F                    LL +M+      + + F
Sbjct: 652 VTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 711

Query: 484 NIIIYAYCKQGKVNNAIQLLD-RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           + ++ A CK+G +  A  ++D  I+ G E  PD+++YT+L+ G C    M EA      M
Sbjct: 712 STVVDALCKEGMIAIAHDVVDMMIKRGVE--PDVVTYTALMDGHCLRSEMDEAVKVFDTM 769

Query: 543 LNEGICPNFATWNVLV 558
           +++G  PN  ++N+L+
Sbjct: 770 VHKGCVPNVRSYNILI 785



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 239/476 (50%), Gaps = 5/476 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  +       L +  ++  FG+ P V     ++++L   NR        + + 
Sbjct: 48  FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+  T+  L++ LC   ++  A  L  +M  +G  P+ V+Y T+++ +CK  QV 
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167

Query: 153 EAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EA  + +     G+S     YN+LI+GLCK  + +    L+ EMVD  I P+V T +T++
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +LC  G V  +  ++  M  RG  PN+ ++ +L+ G+ L      A  +++ M+ +  +
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            NV++Y+TLI+G C   S+D+A+ +  +M      PN  TY+ LI G    G L  A  +
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M++ G  P++V Y  +   LC+N    +A +L++ +   N  P+   + T + G+C 
Sbjct: 348 FHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCR 407

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G ++ A  L   +      PN+ TYN ++ GL +   + EA +L +E+ K G   N  T
Sbjct: 408 AGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 467

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           YN I  G  R    +   +LL +ML  G  +D  T  +++      G   +  Q+L
Sbjct: 468 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/566 (24%), Positives = 258/566 (45%), Gaps = 65/566 (11%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+ +   I      P ++IY  ILD +           ++SN+   G++PNV+TYNI+
Sbjct: 377 DKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 436

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK----LGQVEEARELAMR-F 161
           +  LCK   +  A KL  EM   GC+P+  +Y  I     +    L  +E   E+  R F
Sbjct: 437 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGF 496

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCE------------------------------- 190
              VS    L+  L  +   +    +LC+                               
Sbjct: 497 SVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRS 556

Query: 191 ---------------MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                          M+     P+ + ++ +++S+  + +  T L +  QM   G  P++
Sbjct: 557 PHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV 616

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++   L+  +    R   A  +  ++++ GF P+VV Y TL++GLC             +
Sbjct: 617 YTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------K 663

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P++ TY++LI            + + N M+++   PNVV ++ +V  LC+  M
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 723

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              AH +++ M      P+ VT+   + G C    +D A+K+ D M    C+PN+ +YN 
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++G  ++ R+ +A  L+ ++   G+  + VTYNT++HG+C  G +  A  L  +M+  G
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D +T+ I++   CK   +  A+ LL  I G    + DI+ Y   + G+C +G ++ A
Sbjct: 844 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN-LDADILVYNIAIDGMCRAGELEAA 902

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
                 + ++G+ P+  T+N+++  L
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGL 928



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/569 (26%), Positives = 262/569 (46%), Gaps = 18/569 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM   G+         VINS   +   + A     +I + G +P    +  ++  L 
Sbjct: 67  LSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLC 126

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G +PNV TY  L+  LCK+ +V  A+ +  EM  KG +P+ V
Sbjct: 127 VEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIV 186

Query: 137 SYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +CKL + +    L       +    V   N +++ LCKE  + EA  ++  M
Sbjct: 187 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 246

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + RG++PNV+TY+ ++   C    V+ ++ +   M  + C  N+ S+ +L+ GY      
Sbjct: 247 IHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSV 306

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L+  M R+   PN V Y+TLIHGLC  G + +A+S+ ++M      P++ TY  L
Sbjct: 307 DKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTL 366

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            D   K  +L  A  +   +  +   P++  YT ++  +C+      A  L   ++ +  
Sbjct: 367 SDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGL 426

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+N  I GLC  G +  A KL  +M +  C PN  TYN +  G LR N      E
Sbjct: 427 QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIE 486

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK----MLIEGTKLDAI------ 481
           L+ E+   G  +++ T   ++  +   G+     Q+L K        GT++ ++      
Sbjct: 487 LLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLS 546

Query: 482 -TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            + N +         +++A+   +R+       P  + +T LL  I              
Sbjct: 547 SSHNSLHSRSPHFNTLDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLST 605

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           +M + GI P+  T N+L+ S F +L  LG
Sbjct: 606 QMDSFGIPPDVYTLNILINS-FCHLRRLG 633



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 259/587 (44%), Gaps = 76/587 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + L   +  +G+  +   +  +I+   + GL  +A K+F  + + G  P    YN
Sbjct: 410 ELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL-------------KALCKN--- 113
            I    L  N       +   M   G   +V T  +L+             + LCK    
Sbjct: 470 LITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSS 529

Query: 114 ------------------------------NRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                                         N +D A      M +    P  V +T +++
Sbjct: 530 SRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLT 589

Query: 144 SICKLGQVEEARELAMR---FGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           SI K+        L+ +   FG    VY  N LIN  C   ++  AF +L +++  G  P
Sbjct: 590 SIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQP 649

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +V+TY T+++ LC             +M  +G +P+I ++ SL+            + L 
Sbjct: 650 DVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 696

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           N M+    +PNVV +ST++  LC  G +  A  V   M +    P+V TY+AL+DG    
Sbjct: 697 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLR 756

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
             +  A ++++ M+  GC PNV +Y  ++   CQ     +A  L+E+M+ +    +TVT+
Sbjct: 757 SEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTY 816

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           NT I GLC  GR+  A+ L  +M     +P++ TY  LLD L + + + EA  L+  IE 
Sbjct: 817 NTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEG 876

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             +  +I+ YN  + G+CRAG +  A  L   +  +G + D  T+NI+I+  CK+G ++ 
Sbjct: 877 SNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDE 936

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           A +L  ++                +W    S   Q++ IY + ML E
Sbjct: 937 ANKLFRKMDEND------------IWSNSTSSRNQKSLIYQKIMLPE 971



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 148/594 (24%), Positives = 258/594 (43%), Gaps = 69/594 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    LL+ ++         ++ ++++   R G  E A  +F  +   GL+P V  YN
Sbjct: 375 HLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYN 434

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  +   +  + ++S M ++G  PN  TYN++ +   +NN      +LL EM  +
Sbjct: 435 IMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 494

Query: 130 GCAPDAVSYTTIVSSI-------------CK----------------------------- 147
           G + D  + T +V  +             CK                             
Sbjct: 495 GFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHS 554

Query: 148 ----LGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
                  +++A     R L M        +  L+  + K         L  +M   GI P
Sbjct: 555 RSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPP 614

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +V T + +I+S C +  +  +  +L ++   G  P++ ++ +L+ G              
Sbjct: 615 DVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC------------ 662

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            +MI +G  P++  Y++LIH LC+        ++  +M  +   PNV  +S ++D   K 
Sbjct: 663 -KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 721

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A  + + MI  G  P+VV YT ++   C  +   +A  + + M  + C PN  ++
Sbjct: 722 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 781

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G C   R+D AM LL+QM     + +  TYN L+ GL  V R++ A  L  E+  
Sbjct: 782 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 841

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA--ITFNIIIYAYCKQGKV 496
            G   ++VTY  +L  +C+   + EA  LL    IEG+ LDA  + +NI I   C+ G++
Sbjct: 842 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA--IEGSNLDADILVYNIAIDGMCRAGEL 899

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             A  L   +   G   PD+ +Y  ++ G+C  G + EA    +KM    I  N
Sbjct: 900 EAARDLFSNLSSKG-LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 144/314 (45%), Gaps = 12/314 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L   CE   V  LL +M    +  +  VF +V+++  + G+   A  +   + + G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y  ++D     +       ++  M   G  PNV +YNIL+   C+  R+D A 
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGL 175
            LL +M  +G   D V+Y T++  +C +G+++ A  L      SG    +  Y  L++ L
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 858

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK H + EA  LL  +    +D +++ Y+  I  +C  G +E +  +   +  +G  P++
Sbjct: 859 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 918

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA---YSTLIHGLCSNGSMDEAVSV 292
            ++  ++ G    G   EA+ L+ +M       N  +     +LI+       +D   S+
Sbjct: 919 RTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSLIYQKIMLPEIDLVYSI 978

Query: 293 SYQMEE----NSCP 302
           S   E+    + CP
Sbjct: 979 SVMFEKMFICHGCP 992


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 171/593 (28%), Positives = 285/593 (48%), Gaps = 53/593 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M  +GV+     + S++  +   G A+ AL++  R++  G++P V  Y  ++    
Sbjct: 209 VVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYC 268

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +Y  M R G+ P+V T + L+  LC++ +   AY L  EM   G AP+ V
Sbjct: 269 KGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHV 328

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWLL 188
           +Y T++ S+ K  +  E+  L    G  VS        +Y AL++ L KE KIEEA  +L
Sbjct: 329 TYCTLIDSLAKARRGSESLGL---LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVL 385

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
                  I PN +TY+ ++ + C  GN++ +  +L QM  +   PN+ +F+S++ G +  
Sbjct: 386 RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKR 445

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLI------------------------------- 277
           G   +A+D   +M   G  PNVV Y TLI                               
Sbjct: 446 GCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVV 505

Query: 278 ----HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
               +GL  NG+++ A ++   M+E     +   Y+ L+DG  K GN+  A ++   ++ 
Sbjct: 506 DSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
              SP+ V Y   +  LC    F +A S +++M      P+  T+NT I   C  G+   
Sbjct: 566 KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+KLL +MK+    PN+ TY  L+ GLL    VK+A  L+ E+   G     +T+  +L 
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685

Query: 454 ---GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
              G  R  +++E  +L   M+  G   D   +N +++  C  G   NA  +LD +   G
Sbjct: 686 ACSGSRRPDVILEIHEL---MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRG 742

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              PD I++ +L+ G C S  +  AF    +ML++G+ PN AT+N L+  L S
Sbjct: 743 -IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLES 794



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 247/526 (46%), Gaps = 31/526 (5%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+ Y +V     AL +  R+   G+   V  YN ++              +   MK D
Sbjct: 192 ALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKAD 251

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+EPNV TY  L+   CK   +D A+ L   M   G  PD V+ +               
Sbjct: 252 GVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLS--------------- 296

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                          AL++GLC++ +  EA+ L  EM   G+ PN +TY T+I SL    
Sbjct: 297 ---------------ALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKAR 341

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
               SLG+LG+M  RG   ++  +T+L+      G+  EA D+      +   PN V Y+
Sbjct: 342 RGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYT 401

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L+   C  G++D A  V  QMEE S  PNV T+S++I+G  K G L  A+    +M  +
Sbjct: 402 VLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDS 461

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G +PNVV Y  ++    +      A  +   M  E    N    ++ + GL   G ++ A
Sbjct: 462 GIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGA 521

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             L   M +   L +   Y  L+DGL +   +  AF++  E+ +  +  + V YN  ++ 
Sbjct: 522 EALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINC 581

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C  G   EA   L +M   G + D  T+N +I A C++GK + A++LL  ++      P
Sbjct: 582 LCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK-RNSIKP 640

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++I+YT+L+ G+  +G +++A   L +M + G  P   T   ++++
Sbjct: 641 NLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/589 (26%), Positives = 263/589 (44%), Gaps = 41/589 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D    ++++MK +GV  +   + ++I  Y +    ++A  ++  +   G+ P V   +
Sbjct: 237 DADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLS 296

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L  + +FS    ++  M + G+ PN  TY  L+ +L K  R   +  LL EM ++
Sbjct: 297 ALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSR 356

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-------------------------- 163
           G   D V YT ++  + K G++EEA+++     S                          
Sbjct: 357 GVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGA 416

Query: 164 --------------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                          V  ++++INGL K   + +A   + +M D GI PNV+TY T+I  
Sbjct: 417 EQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDG 476

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                  E +L +   M   G   N     SL+ G    G    A  L+  M   G L +
Sbjct: 477 FFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLD 536

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            V Y+TL+ GL   G+M  A  V  ++ E +  P+   Y+  I+     G    A     
Sbjct: 537 HVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLK 596

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M + G  P+   Y  M+   C+     +A  L+++M   +  PN +T+ T + GL   G
Sbjct: 597 EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAG 656

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            V  A  LL++M      P   T+  +L       R     E+   +   G+  +I  YN
Sbjct: 657 VVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYN 716

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T++H +C  GM   A  +L +ML  G   D ITFN +I  +CK   ++NA  +  ++   
Sbjct: 717 TLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQ 776

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G  +P+I ++ +LL G+ ++G + EA   L  M   G+ PN  T+++LV
Sbjct: 777 G-LSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV 824



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 233/487 (47%), Gaps = 5/487 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           IDG + +L QM+ + V  +   F S+IN   + G   +A     ++++ G+ P V  Y  
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D             +Y +M  +G+E N F  + L+  L KN  ++GA  L  +M  +G
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
              D V+YTT++  + K G +  A    +EL  +       VYN  IN LC   K  EA 
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L EM + G++P+  TY+T+I++ C  G    +L +L +M      PN+ ++T+L+ G 
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           L  G   +A  L N M   GF P  + +  ++     +   D  + +   M       ++
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADI 712

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           T Y+ L+      G    A+ + + M++ G +P+ + +  ++   C+++    A ++  +
Sbjct: 713 TVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQ 772

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  +   PN  TFNT + GL   GR+  A  +L  MK+    PN  TY+ L+ G  + + 
Sbjct: 773 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSN 832

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             EA  L  E+   G      TYN+++    +AGM+ +A +L  +M   G    + T++I
Sbjct: 833 KVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 892

Query: 486 IIYAYCK 492
           ++  + K
Sbjct: 893 LLNGWSK 899



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/628 (24%), Positives = 279/628 (44%), Gaps = 77/628 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M   GV+ +   + ++I+S  +     ++L +   +   G+   + +Y  ++D L 
Sbjct: 314 LFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      +  + + D + PN  TY +L+ A C+   +DGA ++L++M  K   P+ V
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVV 433

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----------------------------- 166
           ++++I++ + K G + +A +   +   SG++                             
Sbjct: 434 TFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDM 493

Query: 167 ----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                     V ++L+NGL K   IE A  L  +M +RG+  + + Y+T++  L   GN+
Sbjct: 494 LHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNM 553

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +  ++  +  +P+   +   +      G+  EA      M   G  P+   Y+T+
Sbjct: 554 PAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTM 613

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I   C  G   +A+ +  +M+ NS  PN+ TY+ L+ G  +AG +  A  + N M S G 
Sbjct: 614 IAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGF 673

Query: 337 SP-----------------------------------NVVAYTCMVKVLCQNNMFHQAHS 361
           +P                                   ++  Y  +V VLC + M   A  
Sbjct: 674 APTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATV 733

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++++M      P+T+TFN  I G C    +D A  +  QM      PNI T+N LL GL 
Sbjct: 734 VLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLE 793

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
              R+ EA  ++++++K G++ N +TY+ ++ G  +    VEA +L  +M+ +G    A 
Sbjct: 794 SAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKAS 853

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N ++  + K G +N A +L   ++  G  +    +Y  LL G        E  I L+ 
Sbjct: 854 TYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTS-STYDILLNGWSKLRNGIEVRILLKD 912

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLG 569
           M   G  P+  T + + R+ FS  G  G
Sbjct: 913 MKELGFKPSKGTISSMSRA-FSRPGMTG 939



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 205/418 (49%), Gaps = 11/418 (2%)

Query: 169 NALINGLCKEHKIEEAFWLL----CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           N++I   C    +  A  LL           +  + ++Y+  +++L + G+   +  +L 
Sbjct: 80  NSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLAPPVLS 139

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR----EGFLPNVVAYSTLIHGL 280
           +M  RG + +  + ++ L G    G   EA+ L   ++R    +G   +VV ++ LI G 
Sbjct: 140 EMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL--DVVGWNALIDGY 197

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    M  A++V  +M       +V  Y++L+ GF  +G+   A ++  RM ++G  PNV
Sbjct: 198 CKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNV 257

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V YT ++   C+     +A SL E M      P+ VT +  + GLC  G+   A  L  +
Sbjct: 258 VTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFRE 317

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +    PN  TY  L+D L +  R  E+  L+ E+   G+ +++V Y  ++  + + G 
Sbjct: 318 MDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGK 377

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + EA  +L     +    + +T+ +++ A+C+ G ++ A Q+L ++       P++++++
Sbjct: 378 IEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVI-PNVVTFS 436

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           S++ G+   G + +A  Y++KM + GI PN  T+  L+   F   G    + +  D++
Sbjct: 437 SIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDML 494



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 211/443 (47%), Gaps = 14/443 (3%)

Query: 134 DAVSYTTIVSSICKLGQVEEAREL---------AMRFGSGVSVYNALINGLCKEHKIEEA 184
           D ++  +I+ S C L  +  A  L           +  +    YN  +  L ++     A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP---NIHSFTSL 241
             +L EM  RG+  + +T ST +  LC  G V  +   L +M VRG      ++  + +L
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEA-AALAEMLVRGRGIDGLDVVGWNAL 193

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + GY        A  +  RM  +G   +VV Y++L+ G   +G  D A+ V  +M+ +  
Sbjct: 194 IDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGV 253

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV TY+ALI  + K   +  A  ++  M+ +G  P+VV  + +V  LC++  F +A++
Sbjct: 254 EPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYA 313

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M      PN VT+ T I  L    R   ++ LL +M     + ++  Y  L+D L 
Sbjct: 314 LFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +  +++EA +++   +   I  N VTY  ++   CRAG +  A Q+L +M  +    + +
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVV 433

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           TF+ II    K+G +  A   + +++  G   P++++Y +L+ G     G + A    + 
Sbjct: 434 TFSSIINGLVKRGCLGKAADYMRKMKDSG-IAPNVVTYGTLIDGFFKFQGQEAALDVYRD 492

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           ML+EG+  N    + LV  L  N
Sbjct: 493 MLHEGVEANNFVVDSLVNGLRKN 515



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 159/358 (44%), Gaps = 5/358 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            +  L++M+  G+   +  + ++I +  R G   +ALK+   ++   +KP +  Y  ++ 
Sbjct: 591 AKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVV 650

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            LL          + + M   G  P   T+  +L+A   + R D   ++   M   G   
Sbjct: 651 GLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHA 710

Query: 134 DAVSYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D   Y T+V  +C  G    A     E+  R        +NALI G CK   ++ AF + 
Sbjct: 711 DITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIY 770

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G+ PN+ T++T++  L   G +  +  +L  M   G  PN  ++  L+ GY   
Sbjct: 771 AQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKK 830

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               EA  L+  M+ +GF+P    Y++L+      G M++A  +  +M+        +TY
Sbjct: 831 SNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTY 890

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
             L++G++K  N +    +   M   G  P+    + M +   +  M  +A  L++ +
Sbjct: 891 DILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 106/248 (42%), Gaps = 32/248 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M   G++     F ++I  + +    + A  ++ ++   GL P +  +N +L  L 
Sbjct: 734 VLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLE 793

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R    + + S+MK+ G+EPN  TY+IL+    K +    A +L  EM +KG  P A 
Sbjct: 794 SAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKA- 852

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
                                        S YN+L++   K   + +A  L  EM  RG+
Sbjct: 853 -----------------------------STYNSLMSDFAKAGMMNQAKELFSEMKRRGV 883

Query: 197 DPNVITYSTIISSLCDVGN-VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
                TY  +++    + N +E  + +L  M   G  P+  + +S+ + +   G T EA 
Sbjct: 884 LHTSSTYDILLNGWSKLRNGIEVRI-LLKDMKELGFKPSKGTISSMSRAFSRPGMTGEAR 942

Query: 256 DLWNRMIR 263
            L   + +
Sbjct: 943 RLLKTLFK 950


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 161/584 (27%), Positives = 282/584 (48%), Gaps = 40/584 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M   G   +   F  +I  Y R     +AL++   + +  L P+   Y  +++ L 
Sbjct: 390 ILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 449

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S+ N +   M   G++PNV  Y+IL+ A     R++ A +LL  M   G APD  
Sbjct: 450 HCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIF 509

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I+S + K G++EEA    +   G G+      + A I G  K  K+ EA     EM
Sbjct: 510 CYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 569

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D G+ PN   Y+ +I+     GN+  +L I  ++   G  P++ + ++ + G L  GR 
Sbjct: 570 LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRV 629

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ +  +G +P+V  YS+LI G C  G +++A  +  +M      PN+  Y+AL
Sbjct: 630 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL 689

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K+G++  A ++++ M   G  P+ V Y+ M+   C++    +A SL  +M  +  
Sbjct: 690 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 749

Query: 372 PPN----------------------------------TVTFNTFIKGLCGCGRVDWAMKL 397
            P+                                  T++FNT I G C   ++  A +L
Sbjct: 750 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQL 809

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M   + +P+  TY  ++D   +  +++EA  L  E+++  + ++ VTY ++++G  +
Sbjct: 810 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 869

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G   E F L  KM+ +G K D +T+ ++IYA+CK+  +  A +L D + G G      I
Sbjct: 870 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 929

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +  L+  +C    + EA   L +M   G+ P+ A  N LVRS 
Sbjct: 930 -HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSF 972



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 159/603 (26%), Positives = 283/603 (46%), Gaps = 76/603 (12%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I+SY+R+G+ ++A  +F+  +   +  ++   N +L  LL      +   +Y+ M
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
               M  +V+TY  L+ ALCK   + GA ++L+EM  KG  P+   Y+ ++  +C++G +
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279

Query: 152 EEARELAMRFGSGVSVYN----------------------------------------AL 171
           +EA EL    G    V N                                        AL
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+G  +E  I+E   +   MV  GI  N+ITY+ +I  LC  G +E +  IL  M   GC
Sbjct: 340 IDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGC 399

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN  +F  L++GY        A +L + M +   +P+ V+Y  +I+GLC    +  A  
Sbjct: 400 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANK 459

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M  +   PNV  YS LI  +A  G +  A ++ + M  +G +P++  Y  ++  L 
Sbjct: 460 LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN-- 409
           +     +A + + ++      P+ VTF  FI G    G++  A K  D+M  +  +PN  
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579

Query: 410 ---------------------------------ITTYNELLDGLLRVNRVKEAFELVTEI 436
                                            + T +  + GLL+  RV+EA ++ +E+
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           ++ G+  ++ TY++++ G C+ G V +AF+L  +M ++G   +   +N ++   CK G +
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A +L D +   G   PD ++Y++++ G C S  + EAF    +M ++G+ P+   +N 
Sbjct: 700 QRARKLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 758

Query: 557 LVR 559
           LV 
Sbjct: 759 LVH 761



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 168/622 (27%), Positives = 291/622 (46%), Gaps = 45/622 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE + +  +ID    L + M  +G+  +   +  +     R     +A   F  +++ G
Sbjct: 269 VIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG 328

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP     + ++D  + E     +  I   M   G+  N+ TYN+L+  LCK  +++ A 
Sbjct: 329 LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAA 388

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALING 174
           ++L  M   GC P++ ++  ++   C+   +  A EL           S VS Y A+ING
Sbjct: 389 EILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS-YGAMING 447

Query: 175 LC-----------------------------------KEHKIEEAFWLLCEMVDRGIDPN 199
           LC                                    E +IEEA  LL  M   G+ P+
Sbjct: 448 LCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPD 507

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +  Y+ IIS L   G +E +   L ++  RG  P+  +F + + GY   G+  EA+  ++
Sbjct: 508 IFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFD 567

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M+  G +PN   Y+ LI+G    G++ EA+S+  ++      P+V T SA I G  K G
Sbjct: 568 EMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNG 627

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A ++++ +   G  P+V  Y+ ++   C+     +A  L ++M  +   PN   +N
Sbjct: 628 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 687

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + GLC  G +  A KL D M +    P+  TY+ ++DG  +   V EAF L  E+   
Sbjct: 688 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 747

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G+Q +   YN ++HG C+ G + +A  L  +ML +G     ++FN +I  YCK  K+  A
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEA 806

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            QL   +    +  PD ++YT+++   C +G M+EA +  ++M    +  +  T+  L+ 
Sbjct: 807 SQLFQEMI-AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 865

Query: 560 SLFSNLGHLGPVYILDDIMANK 581
             ++ LG    V+ L + M  K
Sbjct: 866 G-YNKLGQSSEVFALFEKMVAK 886



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 276/554 (49%), Gaps = 7/554 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ G + +L +M  +G++ +E ++  VI    +VG  ++A+++   + E GL P    Y 
Sbjct: 243 DLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYT 302

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I   L    R +     +  M++ G++P+    + L+    +   +D   ++   M + 
Sbjct: 303 IITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC 362

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G   + ++Y  ++  +CK G++E+A E+      +        +  LI G C+EH +  A
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRA 422

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM  R + P+ ++Y  +I+ LC   ++  +  +L +M   G  PN+  ++ L+  
Sbjct: 423 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMA 482

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   GR  EA  L + M   G  P++  Y+ +I  L   G M+EA +   +++     P+
Sbjct: 483 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 542

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             T+ A I G++K G +  A++ ++ M+ +G  PN   YT ++    +     +A S+  
Sbjct: 543 AVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFR 602

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           ++      P+  T + FI GL   GRV  A+K+  ++K+   +P++ TY+ L+ G  +  
Sbjct: 603 RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQG 662

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V++AFEL  E+   GI  NI  YN ++ G+C++G +  A +L   M  +G + D++T++
Sbjct: 663 EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYS 722

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  YCK   V  A  L   +   G   P    Y +L+ G C  G M++A    ++ML 
Sbjct: 723 TMIDGYCKSENVAEAFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ 781

Query: 545 EGICPNFATWNVLV 558
           +G      ++N L+
Sbjct: 782 KGFATTL-SFNTLI 794



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 226/475 (47%), Gaps = 8/475 (1%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P VF  +IL+ +  +   +D A  +     N       +   +++  + K G +E  
Sbjct: 155 GSSPVVF--DILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELF 212

Query: 155 RE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +     L  + G  V  Y  L+  LCK   +  A  +L EM ++G++PN   YS +I  
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEG 272

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +C VG+++ ++ +   M  +G  PN +++T +  G     R +EA   +  M + G  P+
Sbjct: 273 MCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
             A S LI G    G +DE + +   M     P N+ TY+ LI G  K G +  A++I  
Sbjct: 333 YNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILK 392

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M++ GC PN   +  +++  C+ +   +A  L+++M   N  P+ V++   I GLC C 
Sbjct: 393 GMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCK 452

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A KLL++M      PN+  Y+ L+       R++EA  L+  +   G+  +I  YN
Sbjct: 453 DLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYN 512

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            I+  + +AG + EA   L ++   G K DA+TF   I  Y K GK+  A +  D +   
Sbjct: 513 AIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH 572

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G   P+   YT L+ G   +G + EA    +++   G+ P+  T +  +  L  N
Sbjct: 573 G-LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKN 626



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 216/442 (48%), Gaps = 6/442 (1%)

Query: 18   LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
              +M   G+  +  ++  +IN + + G   +AL +F R+   G+ P V+  +  +  LL 
Sbjct: 566  FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625

Query: 78   ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
              R      ++S +K  G+ P+VFTY+ L+   CK   V+ A++L  EM  KG AP+   
Sbjct: 626  NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 685

Query: 138  YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            Y  +V  +CK G ++ AR+L               Y+ +I+G CK   + EAF L  EM 
Sbjct: 686  YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745

Query: 193  DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             +G+ P+   Y+ ++   C  G++E ++ +  +M  +G    + SF +L+ GY    +  
Sbjct: 746  SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 804

Query: 253  EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            EAS L+  MI +  +P+ V Y+T+I   C  G M+EA  +  +M+E +   +  TY++L+
Sbjct: 805  EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864

Query: 313  DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             G+ K G       ++ +M++ G  P+ V Y  ++   C+ +   +A  L +++  +   
Sbjct: 865  YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924

Query: 373  PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
                  +  I  LC    +  A KLLD+M +    P++   N L+       ++ EA  +
Sbjct: 925  TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984

Query: 433  VTEIEKCGIQLNIVTYNTILHG 454
               ++  G+  +  T   +++G
Sbjct: 985  FEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 257/558 (46%), Gaps = 40/558 (7%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            LL++M   G+  +  V+  +I +Y   G  E+A ++   +   G+ P +  YN I+  L 
Sbjct: 460  LLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               +    +     ++  G++P+  T+   +    K  ++  A K   EM + G  P+  
Sbjct: 520  KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579

Query: 137  SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
             YT +++   K G + EA  +  R  +      V   +A I+GL K  +++EA  +  E+
Sbjct: 580  LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             ++G+ P+V TYS++IS  C  G VE +  +  +M ++G  PNI  + +L+ G    G  
Sbjct: 640  KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
              A  L++ M  +G  P+ V YST+I G C + ++ EA S+ ++M      P+   Y+AL
Sbjct: 700  QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759

Query: 312  ----------------------------------IDGFAKAGNLLGASQIWNRMISNGCS 337
                                              IDG+ K+  +  ASQ++  MI+    
Sbjct: 760  VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819

Query: 338  PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            P+ V YT ++   C+     +A+ L ++M   N   +TVT+ + + G    G+      L
Sbjct: 820  PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879

Query: 398  LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             ++M      P+  TY  ++    + + + EAF+L  E+   G+      ++ ++  +C+
Sbjct: 880  FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 939

Query: 458  AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
               + EA +LL +M   G K      N ++ ++ + GK++ A ++ + ++  G   PD  
Sbjct: 940  REDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLG-LVPDTT 998

Query: 518  SYTSLLWGICNSGGMQEA 535
            +   L+ G  N    ++A
Sbjct: 999  TLIDLVNGNLNDTDSEDA 1016



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 223/458 (48%), Gaps = 7/458 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           YLL+ ++  G+      F + I  Y + G   +A K F  + + GL P   +Y  +++  
Sbjct: 530 YLLE-IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                      I+  +   G+ P+V T +  +  L KN RV  A K+  E+  KG  PD 
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            +Y++++S  CK G+VE+A EL            + +YNAL++GLCK   I+ A  L   
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G++P+ +TYST+I   C   NV  +  +  +M  +G  P+   + +L+ G    G 
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A +L+  M+++GF    ++++TLI G C +  + EA  +  +M      P+  TY+ 
Sbjct: 769 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +ID   KAG +  A+ ++  M       + V YT ++    +     +  +L EKM  + 
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+   I   C    +  A KL D++     L   T ++ L+  L +   + EA 
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 947

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +L+ E+ + G++ ++   NT++     AG + EA ++ 
Sbjct: 948 KLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVF 985



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 3/154 (1%)

Query: 4    KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
            KLG+  E+     L ++M  +GV   E  +  VI ++ +     +A K+   +   G+  
Sbjct: 869  KLGQSSEVFA---LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 925

Query: 64   TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               I++ ++ AL      +  + +   M   G++P++   N L+++  +  ++D A ++ 
Sbjct: 926  KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVF 985

Query: 124  VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
              + + G  PD  +   +V+        E+AR L
Sbjct: 986  EGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 266/497 (53%), Gaps = 10/497 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  +N I+ +L+    +     ++  M+  G+EP++FT NIL+   C   ++  ++ +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
           L ++   G  P+ ++  T++  +C  G+V+++     + +A  F      Y  L+NGLCK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +   A  LL  + DR   PNV+ Y+TII  LC    V  +  +  +M  RG  PN+ +
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++L+ G+ L G+  EA  L N MI +   PNV  Y+ L+  LC  G + EA ++   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    PNV +Y+ L+DG+   G +  A Q+++ M+  G +PNV +Y  M+  LC++    
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A +L+ ++  +N  PNTVT+++ I G C  GR+  A+ LL +M       ++ TY  LL
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L +   + +A  L  ++++ GIQ N  TY  ++ G+C+ G    A +L   +L++G +
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           ++  T+N++I   CK+G ++ A+ +  ++   G   PD +++  ++  +       +A  
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKMEENG-CIPDAVTFEIIIRSLFEKDQNDKA-- 484

Query: 538 YLQKMLNEGICPNFATW 554
             +K+L+E I  +   +
Sbjct: 485 --EKLLHEMIAKDLLRF 499



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 248/479 (51%), Gaps = 5/479 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  ++     A+ +F +++  G++P +   N +++      + +    +   + 
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +PN  T N L+K LC    V  +     ++  +G   D VSY T+++ +CK+G+  
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 153 EARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L            V +YN +I+GLCK+  + EA+ L  EM  RGI PNVITYST+I
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C  G +  + G+L +M ++  NPN++++T L+      G+  EA +L   M +EG  
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNVV+Y+TL+ G C  G +  A  + + M +    PNV +Y+ +ID   K+  +  A  +
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              ++     PN V Y+ ++   C+      A  L+++M     P + VT+ + +  LC 
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
              +D A  L  +MK+    PN  TY  L+DGL +  R K A +L   +   G ++N+ T
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWT 432

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           YN ++ G+C+ GM+ EA  +  KM   G   DA+TF III +  ++ + + A +LL  +
Sbjct: 433 YNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 233/471 (49%), Gaps = 6/471 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           P +  +N ++ +L K      A  L  +M  KG  PD  +   +++  C LGQ+  +   
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 155 --RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             + L + +       N L+ GLC + +++++     ++V +G   + ++Y+T+++ LC 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G   ++L +L  +  R   PN+  + +++ G       +EA DL++ M   G  PNV+ 
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTLI+G C  G + EA  +  +M   +  PNV TY+ L+D   K G +  A  +   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G  PNVV+Y  ++   C       A  +   M  +   PN  ++N  I  LC   RVD
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            AM LL ++     +PN  TY+ L+DG  ++ R+  A +L+ E+   G   ++VTY ++L
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C+   + +A  L  KM   G + +  T+  +I   CK G+  NA +L   +   G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG-C 426

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             ++ +Y  ++ G+C  G + EA     KM   G  P+  T+ +++RSLF 
Sbjct: 427 RINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFE 477



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 229/461 (49%), Gaps = 5/461 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM+V+G+         +IN +  +G    +  +  +I + G +P     N ++  L 
Sbjct: 32  LFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLC 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +         +  +   G + +  +Y  LL  LCK      A KLL  + ++   P+ V
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVV 151

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y TI+  +CK   V EA +L     +      V  Y+ LI G C   ++ EAF LL EM
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEM 211

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I+PNV TY+ ++ +LC  G V+ +  +L  M   G  PN+ S+ +L+ GY L G  
Sbjct: 212 ILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEV 271

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +++ M+++G  PNV +Y+ +I  LC +  +DEA+++  ++   +  PN  TYS+L
Sbjct: 272 QNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSL 331

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDGF K G +  A  +   M   G   +VV YT ++  LC+N    +A +L  KM     
Sbjct: 332 IDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+   I GLC  GR   A KL   +    C  N+ TYN ++ GL +   + EA  
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           + +++E+ G   + VT+  I+  +       +A +LL +M+
Sbjct: 452 MKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 210/399 (52%), Gaps = 5/399 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K E+    +   ++  +G    +  + +++N   ++G    ALK+   I +   +P V +
Sbjct: 93  KGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVM 152

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN I+D L  +   +    +YS M   G+ PNV TY+ L+   C   ++  A+ LL EM 
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIE 182
            K   P+  +YT ++ ++CK G+V+EA+  LA+    GV      YN L++G C   +++
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  +   MV +G++PNV +Y+ +I  LC    V+ ++ +L ++  +   PN  +++SL+
Sbjct: 273 NAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLI 332

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+   GR   A DL   M   G   +VV Y++L+  LC N ++D+A ++  +M+E    
Sbjct: 333 DGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN  TY+ALIDG  K G    A +++  ++  GC  NV  Y  M+  LC+  M  +A ++
Sbjct: 393 PNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAM 452

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             KM    C P+ VTF   I+ L    + D A KLL +M
Sbjct: 453 KSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 213/405 (52%), Gaps = 1/405 (0%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L +R    +  +N ++  L K      A  L  +M  +GI+P++ T + +I+  C +G +
Sbjct: 2   LLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQM 61

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             S  +LG++   G  PN  +  +L+KG  L G   ++    ++++ +GF  + V+Y+TL
Sbjct: 62  TFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATL 121

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++GLC  G    A+ +   +E+ S  PNV  Y+ +IDG  K   +  A  +++ M + G 
Sbjct: 122 LNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV+ Y+ ++   C      +A  L+ +M  +N  PN  T+   +  LC  G+V  A  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  M +    PN+ +YN L+DG   +  V+ A ++   + + G+  N+ +YN ++  +C
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLC 301

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           ++  V EA  LL ++L +    + +T++ +I  +CK G++ +A+ LL  +   G+   D+
Sbjct: 302 KSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP-ADV 360

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++YTSLL  +C +  + +A     KM   GI PN  T+  L+  L
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 196/374 (52%), Gaps = 15/374 (4%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P ++ ++ I+ SL  + +  T++ +  QM V+G  P++ +   L+  +   G+   +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSM-------DEAVSVSYQMEENSCPPNVTTYSA 310
             ++++ G+ PN +  +TL+ GLC  G +       D+ V+  +QM++        +Y+ 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQ-------VSYAT 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L++G  K G    A ++   +      PNVV Y  ++  LC++ + ++A+ L  +M    
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN +T++T I G C  G++  A  LL++M      PN+ TY  L+D L +  +VKEA 
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAK 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L+  + K G++ N+V+YNT++ G C  G V  A Q+   M+ +G   +  ++NI+I   
Sbjct: 241 NLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRL 300

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK  +V+ A+ LL  +       P+ ++Y+SL+ G C  G +  A   L++M + G   +
Sbjct: 301 CKSKRVDEAMNLLREVLHKN-MVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPAD 359

Query: 551 FATWNVLVRSLFSN 564
             T+  L+ +L  N
Sbjct: 360 VVTYTSLLDALCKN 373



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 149/301 (49%), Gaps = 10/301 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++ ++   + LL  M  EGV  +   + ++++ Y  +G  + A +MF+ + + G
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN ++D L    R      +   +    M PN  TY+ L+   CK  R+  A 
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
            LL EM ++G   D V+YT+++ ++CK   +++A  L M+    G+      Y ALI+GL
Sbjct: 346 DLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  + + A  L   ++ +G   NV TY+ +IS LC  G ++ +L +  +M   GC P+ 
Sbjct: 406 CKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDA 465

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  +++      +  +A  L + MI +  L          HG  S    D+A  + ++
Sbjct: 466 VTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL-----RFRDFHGERSPNENDKAEKLLHE 520

Query: 296 M 296
           M
Sbjct: 521 M 521


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 280/559 (50%), Gaps = 7/559 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           ++ VF  +I +Y +     +A + F  +R  G   ++   N ++ +L+      +   +Y
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             + R G+  NV+T NI++ ALCK+ +++     L ++  KG  PD V+Y T++S+    
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 149 GQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G +EEA EL  AM    F  GV  YN +INGLCK  K E A  +  EM+  G+ P+  TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            +++   C  G+V  +  +   M  R   P++  F+S++  +   G   +A   +N +  
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G +P+ V Y+ LI G C  G +  A+++  +M +  C  +V TY+ ++ G  K   L  
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++N M      P+    T ++   C+      A  L +KM  +    + VT+NT + 
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G    G +D A ++   M   E LP   +Y+ L++ L     + EAF +  E+    I+ 
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            ++  N+++ G CR+G   +    L KM+ EG   D I++N +IY + ++  ++ A  L+
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643

Query: 504 DRI-RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++    G   PD+ +Y S+L G C    M+EA + L+KM+  G+ P+ +T+  ++    
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703

Query: 563 SNLGHLGPVYILDDIMANK 581
           S   +L   + + D M  +
Sbjct: 704 SQ-DNLTEAFRIHDEMLQR 721



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/537 (27%), Positives = 262/537 (48%), Gaps = 43/537 (8%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           ++ +G + S     ++I S  R+G  E A  ++  I   G+   V   N +++AL  + +
Sbjct: 191 LRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGK 250

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
              +    S ++  G+ P++ TYN L+ A      ++ A++L+  M  KG +P   +Y T
Sbjct: 251 MEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310

Query: 141 IVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++ +CK G+ E A+E+ A    SG+S     Y +L+   CK+  + E   +  +M  R 
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+++ +S+++S     GN++ +L     +   G  P+   +T L++GY   G    A 
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP------------ 303
           +L N M+++G   +VV Y+T++HGLC    + EA  +  +M E +  P            
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490

Query: 304 -----------------------NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                                  +V TY+ L+DGF K G++  A +IW  M+S    P  
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           ++Y+ +V  LC      +A  + ++M  +N  P  +  N+ IKG C  G        L++
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--EKCGIQLNIVTYNTILHGVCRA 458
           M     +P+  +YN L+ G +R   + +AF LV ++  E+ G+  ++ TYN+ILHG CR 
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
             + EA  +L KM+  G   D  T+  +I  +  Q  +  A ++ D +   G ++PD
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG-FSPD 726



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 259/486 (53%), Gaps = 10/486 (2%)

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +R  ++N + S     G   +VF  ++L++   +  ++  A++    + +KG      + 
Sbjct: 146 SRLEIVNSLDSTFSNCGSNDSVF--DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC 203

Query: 139 TTIVSSICKLGQVEEA----RELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMV 192
             ++ S+ ++G VE A    +E++ R G G++VY  N ++N LCK+ K+E+    L ++ 
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEIS-RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQ 262

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           ++G+ P+++TY+T+IS+    G +E +  ++  M  +G +P ++++ +++ G    G+  
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A +++  M+R G  P+   Y +L+   C  G + E   V   M      P++  +S+++
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             F ++GNL  A   +N +   G  P+ V YT +++  C+  M   A +L  +M  + C 
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            + VT+NT + GLC    +  A KL ++M +    P+  T   L+DG  ++  ++ A EL
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++++  I+L++VTYNT+L G  + G +  A ++   M+ +      I+++I++ A C 
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G +  A ++ D +       P ++   S++ G C SG   +   +L+KM++EG  P+  
Sbjct: 563 KGHLAEAFRVWDEMISKN-IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621

Query: 553 TWNVLV 558
           ++N L+
Sbjct: 622 SYNTLI 627



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 239/489 (48%), Gaps = 13/489 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  +++ V   L Q++ +GV      + ++I++Y   GL E+A ++   +   G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +++ L    ++     +++ M R G+ P+  TY  LL   CK   V    
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
           K+  +M ++   PD V +++++S   + G +++A    M F S           +Y  LI
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA---LMYFNSVKEAGLIPDNVIYTILI 417

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G C++  I  A  L  EM+ +G   +V+TY+TI+  LC    +  +  +  +M  R   
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+ ++ T L+ G+   G    A +L+ +M  +    +VV Y+TL+ G    G +D A  +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P   +YS L++     G+L  A ++W+ MIS    P V+    M+K  C+
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE--CLPNI 410
           +       S +EKM  E   P+ +++NT I G      +  A  L+ +M++ +   +P++
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN +L G  R N++KEA  ++ ++ + G+  +  TY  +++G      + EAF++  +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717

Query: 471 MLIEGTKLD 479
           ML  G   D
Sbjct: 718 MLQRGFSPD 726



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 204/420 (48%), Gaps = 2/420 (0%)

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
           GS  SV++ LI    +  K+ EA      +  +G   ++   + +I SL  +G VE + G
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  ++   G   N+++   ++      G+  +     +++  +G  P++V Y+TLI    
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           S G M+EA  +   M      P V TY+ +I+G  K G    A +++  M+ +G SP+  
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++   C+     +   +   M   +  P+ V F++ +      G +D A+   + +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           K+   +P+   Y  L+ G  R   +  A  L  E+ + G  +++VTYNTILHG+C+  M+
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA +L  +M       D+ T  I+I  +CK G + NA++L  +++       D+++Y +
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK-EKRIRLDVVTYNT 520

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           LL G    G +  A      M+++ I P   ++++LV +L S  GHL   + + D M +K
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK-GHLAEAFRVWDEMISK 579


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  261 bits (667), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 267/529 (50%), Gaps = 12/529 (2%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+ A+ +F  + +    PTV  +N +  A+    ++ ++  +   M+  G+  +++T +I
Sbjct: 69  ADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---- 161
           ++   C+  ++  A+  + ++   G  PD V + T+++ +C   +V EA EL  R     
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 162 -GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
               +   N L+NGLC   K+ +A  L+  MV+ G  PN +TY  +++ +C  G    ++
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L +M  R    +   ++ ++ G    G    A +L+N M  +GF  +++ Y+TLI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C+ G  D+   +   M +    PNV T+S LID F K G L  A Q+   M+  G +PN 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + Y  ++   C+ N   +A  +++ M  + C P+ +TFN  I G C   R+D  ++L  +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M     + N  TYN L+ G  +  +++ A +L  E+    ++ +IV+Y  +L G+C  G 
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A ++ GK+     +LD   + III+  C   KV++A  L   +   G    D  +Y 
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG-VKLDARAYN 547

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
            ++  +C    + +A I  +KM  EG  P+  T+N+L+R+      HLG
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA------HLG 590



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 270/560 (48%), Gaps = 33/560 (5%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L +QM+ +G++ S      +IN + R      A     +I + G +P   I+N +L+
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  E R S    +   M   G +P + T N L+  LC N +V  A  L+  M   G  P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           + V+Y  +++ +CK GQ   A E                              LL +M +
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAME------------------------------LLRKMEE 256

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I  + + YS II  LC  G+++ +  +  +M ++G   +I ++ +L+ G+   GR  +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
            + L   MI+    PNVV +S LI      G + EA  +  +M +    PN  TY++LID
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF K   L  A Q+ + MIS GC P+++ +  ++   C+ N       L  +M+      
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           NTVT+NT ++G C  G+++ A KL  +M      P+I +Y  LLDGL     +++A E+ 
Sbjct: 437 NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            +IEK  ++L+I  Y  I+HG+C A  V +A+ L   + ++G KLDA  +NI+I   C++
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRK 556

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             ++ A  L  ++   G   PD ++Y  L+           A   +++M + G   + +T
Sbjct: 557 DSLSKADILFRKMTEEGHA-PDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615

Query: 554 WNVLVRSLFSNLGHLGPVYI 573
             +++  L S  G L   ++
Sbjct: 616 VKMVINMLSS--GELDKSFL 633



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 206/420 (49%), Gaps = 36/420 (8%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  +M+     P VI ++ + S++      E  L +  QM  +G   +I++ +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +   A     ++++ G+ P+ V ++TL++GLC    + EA+ +  +M E 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P + T + L++G    G +  A  + +RM+  G  PN V Y  ++ V+C++     A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 360 HSLIEKMAFENC-----------------------------------PPNTVTFNTFIKG 384
             L+ KM   N                                      + +T+NT I G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  GR D   KLL  M + +  PN+ T++ L+D  ++  +++EA +L+ E+ + GI  N
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            +TYN+++ G C+   + EA Q++  M+ +G   D +TFNI+I  YCK  ++++ ++L  
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G    + ++Y +L+ G C SG ++ A    Q+M++  + P+  ++ +L+  L  N
Sbjct: 428 EMSLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 179/346 (51%), Gaps = 4/346 (1%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+   L   L+G +  +A DL+  MI+   LP V+ ++ L   +      +  +++  QM
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           E      ++ T S +I+ F +   L  A     +++  G  P+ V +  ++  LC     
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L+++M      P  +T NT + GLC  G+V  A+ L+D+M +    PN  TY  +
Sbjct: 175 SEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L+ + +  +   A EL+ ++E+  I+L+ V Y+ I+ G+C+ G +  AF L  +M I+G 
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           K D IT+N +I  +C  G+ ++  +LL D I+   + +P++++++ L+      G ++EA
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIK--RKISPNVVTFSVLIDSFVKEGKLREA 352

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
              L++M+  GI PN  T+N L+   F     L     + D+M +K
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDG-FCKENRLEEAIQMVDLMISK 397



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 176/355 (49%), Gaps = 5/355 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G       + ++I  +   G  +   K+   + +  
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D+ + E +    + +   M + G+ PN  TYN L+   CK NR++ A 
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           +++  M +KGC PD +++  +++  CK  ++++     RE+++R   +    YN L+ G 
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+E A  L  EMV R + P++++Y  ++  LCD G +E +L I G++       +I
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G   +  AY+ +I  LC   S+ +A  +  +
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           M E    P+  TY+ LI       +   A+++   M S+G   +V     ++ +L
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 161/567 (28%), Positives = 277/567 (48%), Gaps = 24/567 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M   G   +   F  +I  Y R     +AL++   + +  L P+   Y  +++ L 
Sbjct: 102 ILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 161

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S+ N +   M   G++PNV  Y+ L+       R++ A +LL  M   G APD  
Sbjct: 162 HCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIF 221

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I+S + K G++EEA    +   G G+      + A I G  K  K+ EA     EM
Sbjct: 222 CYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 281

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D G+ PN   Y+ +I+     GN+  +L I   +   G  P++ + ++ + G L  GR 
Sbjct: 282 LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRV 341

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ +  +G +P+V  YS+LI G C  G +++A  +  +M      PN+  Y+AL
Sbjct: 342 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL 401

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K+G++  A ++++ M   G  P+ V Y+ M+   C++    +A SL  +M  +  
Sbjct: 402 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 461

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P++  +N  + G C  G ++ AM L  +M Q +      ++N L+DG  +  +++EA +
Sbjct: 462 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQ-KGFATTLSFNTLIDGYCKSCKIQEASQ 520

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA-----------------FQLLGKMLIE 474
           L  E+    I  + VTY T++   C+AG + EA                 F L  KM+ +
Sbjct: 521 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAK 580

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G K D +T+ ++IYA+CK+  +  A +L D + G G      I +  L+  +C    + E
Sbjct: 581 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI-HDLLITALCKREDLTE 639

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           A   L +M   G+ P+ A  + LVRS 
Sbjct: 640 ASKLLDEMGELGLKPSLAACSTLVRSF 666



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 157/563 (27%), Positives = 275/563 (48%), Gaps = 24/563 (4%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            ++M+  G+        ++I+ + R G  ++ L++   +   G+   +  YN ++  L  
Sbjct: 33  FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 92

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
             +      I   M   G +PN  T+ +L++  C+ + +  A +LL EM  +   P AVS
Sbjct: 93  FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 152

Query: 138 YTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  +++ +C    +  A +L   M F      V VY+ LI G   E +IEEA  LL  M 
Sbjct: 153 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 212

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G+ P++  Y+ IIS L   G +E +   L ++  RG  P+  +F + + GY   G+  
Sbjct: 213 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 272

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA+  ++ M+  G +PN   Y+ LI+G    G++ EA+S+   +      P+V T SA I
Sbjct: 273 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G  K G +  A ++++ +   G  P+V  Y+ ++   C+     +A  L ++M  +   
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 392

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN   +N  + GLC  G +  A KL D M +    P+  TY+ ++DG  +   V EAF L
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             E+   G+Q +   YN ++HG C+ G + +A  L  +ML +G     ++FN +I  YCK
Sbjct: 453 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCK 511

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA----------------- 535
             K+  A QL   +    +  PD ++YT+++   C +G M+EA                 
Sbjct: 512 SCKIQEASQLFQEMI-AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 570

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
           F   +KM+ +G+ P+  T+ +++
Sbjct: 571 FALFEKMVAKGVKPDEVTYGLVI 593



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 249/506 (49%), Gaps = 7/506 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           E GL P    Y  I   L    R +     +  M++ G++P+    + L+    +   +D
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALI 172
              ++   M + G   + ++Y  ++  +CK G++E+A E+      +        +  LI
Sbjct: 63  EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLI 122

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G C+EH +  A  LL EM  R + P+ ++Y  +I+ LC   ++  +  +L +M   G  
Sbjct: 123 EGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLK 182

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN+  +++L+ GY   GR  EA  L + M   G  P++  Y+ +I  L   G M+EA + 
Sbjct: 183 PNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY 242

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +++     P+  T+ A I G++K G +  A++ ++ M+ +G  PN   YT ++    +
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFK 302

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A S+   +      P+  T + FI GL   GRV  A+K+  ++K+   +P++ T
Sbjct: 303 AGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 362

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+ G  +   V++AFEL  E+   GI  NI  YN ++ G+C++G +  A +L   M 
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G + D++T++ +I  YCK   V  A  L   +   G   P    Y +L+ G C  G M
Sbjct: 423 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDM 481

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           ++A    ++ML +G      ++N L+
Sbjct: 482 EKAMNLFREMLQKGFATTL-SFNTLI 506



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 131/541 (24%), Positives = 259/541 (47%), Gaps = 24/541 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M   G+  +  V+ ++I  Y   G  E+A ++   +   G+ P +  YN I+  L 
Sbjct: 172 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    +     ++  G++P+  T+   +    K  ++  A K   EM + G  P+  
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291

Query: 137 SYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YT +++   K G + EA    R L A+     V   +A I+GL K  +++EA  +  E+
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            ++G+ P+V TYS++IS  C  G VE +  +  +M ++G  PNI  + +L+ G    G  
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L++ M  +G  P+ V YST+I G C + ++ EA S+ ++M      P+   Y+AL
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  K G++  A  ++  M+  G +   +++  ++   C++    +A  L ++M  +  
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL-----------------PNITTYN 414
            P+ VT+ T I   C  G+++ A  L  +M++   +                 P+  TY 
Sbjct: 531 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYG 590

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++    + + + EAF+L  E+   G+      ++ ++  +C+   + EA +LL +M   
Sbjct: 591 LVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGEL 650

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G K      + ++ ++ + GK++ A ++ + ++  G   PD  +   L+ G  N    ++
Sbjct: 651 GLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG-LVPDTTTLIDLVNGNLNDTDSED 709

Query: 535 A 535
           A
Sbjct: 710 A 710



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 211/441 (47%), Gaps = 23/441 (5%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
             +M   G+  +  ++  +IN + + G   +AL +F  +   G+ P V+  +  +  LL 
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
             R      ++S +K  G+ P+VFTY+ L+   CK   V+ A++L  EM  KG AP+   
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  +V  +CK G ++ AR+L               Y+ +I+G CK   + EAF L  EM 
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            +G+ P+   Y+ ++   C  G++E ++ +  +M  +G    + SF +L+ GY    +  
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 516

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS------------ 300
           EAS L+  MI +  +P+ V Y+T+I   C  G M+EA  +  +M+E +            
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEK 576

Query: 301 -----CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
                  P+  TY  +I    K  NL+ A ++ + ++  G       +  ++  LC+   
Sbjct: 577 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 636

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L+++M      P+    +T ++     G++D A ++ + +K    +P+ TT  +
Sbjct: 637 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 696

Query: 416 LLDGLLRVNRVKEAFELVTEI 436
           L++G L     ++A  L+ ++
Sbjct: 697 LVNGNLNDTDSEDARNLIKQL 717



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 36/406 (8%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G+ PN  TY+ I + LC    +  +     +M   G  P+ ++ ++L+ G++  G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             E   + + M+  G   N++ Y+ LIHGLC  G M++A  +   M    C PN  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI+G+ +  N+  A ++ + M      P+ V+Y  M+  LC       A+ L+EKM F  
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN V ++T I G    GR++ A +LLD M      P+I  YN ++  L +  +++EA 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG--------TKL---- 478
             + EI+  G++ + VT+   + G  + G + EA +   +ML  G        T L    
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 479 -----------------------DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
                                  D  T +  I+   K G+V  A+++   ++  G   PD
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG-LVPD 359

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + +Y+SL+ G C  G +++AF    +M  +GI PN   +N LV  L
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGL 405



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 219/458 (47%), Gaps = 25/458 (5%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           YLL+ ++  G+      F + I  Y + G   +A K F  + + GL P   +Y  +++  
Sbjct: 242 YLLE-IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                      I+ ++   G+ P+V T +  +  L KN RV  A K+  E+  KG  PD 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            +Y++++S  CK G+VE+A EL            + +YNAL++GLCK   I+ A  L   
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G++P+ +TYST+I   C   NV  +  +  +M  +G  P+   + +L+ G    G 
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A +L+  M+++GF    ++++TLI G C +  + EA  +  +M      P+  TY+ 
Sbjct: 481 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +ID   KAG +  A+ ++  M                    +N +     +L EKM  + 
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQE------------------RNLIVDTVFALFEKMVAKG 581

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+   I   C    +  A KL D++     L   T ++ L+  L +   + EA 
Sbjct: 582 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 641

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +L+ E+ + G++ ++   +T++     AG + EA ++ 
Sbjct: 642 KLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 679



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 21/371 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  ++K +G+      + S+I+ + + G  E+A ++   +   G+ P + IYN ++D L 
Sbjct: 347 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 406

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     ++  M   G+EP+  TY+ ++   CK+  V  A+ L  EM +KG  P + 
Sbjct: 407 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 466

Query: 137 SYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            Y  +V   CK G +E+A    RE+  +  +    +N LI+G CK  KI+EA  L  EM+
Sbjct: 467 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 526

Query: 193 DRGIDPNVITYSTIISSLCDVGN-----------------VETSLGILGQMFVRGCNPNI 235
            + I P+ +TY+T+I   C  G                  V+T   +  +M  +G  P+ 
Sbjct: 527 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDE 586

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++  +       EA  L + ++ +G L     +  LI  LC    + EA  +  +
Sbjct: 587 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 646

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P++   S L+  F +AG +  A++++  + S G  P+      +V     +  
Sbjct: 647 MGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTD 706

Query: 356 FHQAHSLIEKM 366
              A +LI+++
Sbjct: 707 SEDARNLIKQL 717



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 121/268 (45%), Gaps = 23/268 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +GV     V+ ++++   + G  E+A+ +F  + + G   T+  +N ++D   
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYC 510

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR-----------------VDGA 119
              +    + ++  M    + P+  TY  ++   CK  +                 VD  
Sbjct: 511 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 570

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALING 174
           + L  +M  KG  PD V+Y  ++ + CK   + EA +L     G G+    ++++ LI  
Sbjct: 571 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 630

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK   + EA  LL EM + G+ P++   ST++ S  + G ++ +  +   +   G  P+
Sbjct: 631 LCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 690

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMI 262
             +   L+ G L    + +A +L  +++
Sbjct: 691 TTTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 29/147 (19%), Positives = 67/147 (45%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  L ++M  +GV   E  +  VI ++ +     +A K+   +   G+     I++ 
Sbjct: 567 VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 626

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ AL      +  + +   M   G++P++   + L+++  +  ++D A ++   + + G
Sbjct: 627 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 686

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL 157
             PD  +   +V+        E+AR L
Sbjct: 687 LVPDTTTLIDLVNGNLNDTDSEDARNL 713


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 214/413 (51%), Gaps = 4/413 (0%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    +N + D      R   +  +Y  M   G       Y IL+  LCK    D AYKL
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS----VYNALINGLCKE 178
           L  M  K     A++Y+TI++ +CKL +VEEAREL  +           Y  ++  LCK 
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +I++A   + EM  RGI P+   Y+ ++S LC    VE +  +  +M  +  NPN+ ++
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G     R   A +L+  M  +G++P  V+Y+TLI G C    +  A  V  +M  
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           ++C PNV TY+ LIDG +K+G +  A+++ + M+  G +PNV  Y+C++   C+     +
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDE 307

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           AH L+E+M  +   P  VT+N  +  LC   +++ A KL   M Q  C P + TYN LL 
Sbjct: 308 AHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLR 367

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            L    ++  A  L  E+   G   + +TY+T+  G+ RAG V EA +L+ KM
Sbjct: 368 ALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 220/415 (53%), Gaps = 6/415 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P   T+N +     K  R++   ++   M   G    A  Y  ++S +CK+G  +EA +L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 158 A-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                  RF      Y+ +IN LCK +++EEA  L+ E + R   P+ +TY  I+  LC 
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELI-EKMARYAPPDALTYGPIVERLCK 126

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              ++ +L  + +M  RG  P+   +  +L G     +  EA  L+ +M+++   PNVV 
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+TLI+GLC    ++ A  +  +M      P   +Y+ LIDGF K  +L+ A  ++++M+
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            + C PNVV YT ++  L ++     A  +++ M  +   PN  T++  I G C   RVD
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A KLL+QM      P + TYN LL+ L R +++++AF+L   + +      +VTYNT+L
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
             +C    +  A +L  +M+ +G   DAIT++ + +   + GKV+ A +L+++++
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 221/422 (52%), Gaps = 6/422 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M +  V      F +V + + + G  EQ  +++  + E G       Y  ++  L     
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           F     +   M+    +     Y+ ++  LCK NRV+ A +L+ +M  +   PDA++Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGP 119

Query: 141 IVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           IV  +CK  ++++A     E+A R       +YN +++GLC+E K+EEA  L  +MV + 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I+PNV+TY+T+I+ LC    +ET+  +  +M  +G  P   S+ +L+ G+        A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           D++++M+R   +PNVV Y+TLI GL  +G +  A  V   M +    PNV TYS LIDGF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K   +  A ++  +M++ G +P VV Y  ++  LC+ +    A  L   MA   C P  
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+NT ++ LC   ++D A +L  +M    C P+  TY+ L  GL R  +V EA EL+ +
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 436 IE 437
           ++
Sbjct: 420 MK 421



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 203/401 (50%), Gaps = 6/401 (1%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R   G + +N + +G  K  ++E+   +   MV+ G       Y  +IS LC VGN + +
Sbjct: 5   RVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEA 64

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +L  M ++       ++++++       R  EA +L  +M R    P+ + Y  ++  
Sbjct: 65  YKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVER 123

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC    +D+A++   +M      P+   Y+ ++ G  +   +  A  ++ +M+    +PN
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           VV Y  ++  LC+      A+ L ++MA +   P  V++NT I G C    +  A  + D
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M +  C+PN+ TY  L+DGL +  +V+ A E++  + K G+  N+ TY+ ++ G C+  
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW--NPDII 517
            V EA +LL +M+ +G     +T+NI++ + C+  K+ +A +L    RG  +   +P ++
Sbjct: 304 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF---RGMAQRRCHPTVV 360

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +Y +LL  +C+   +  A     +M+ +G  P+  T++ L 
Sbjct: 361 TYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLA 401



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 166/336 (49%), Gaps = 2/336 (0%)

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M +R   P   +F ++  G+   GR  +  +++  M+  G+      Y  LI  LC  G+
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
            DEA  + + M           YS +I+   K   +  A ++  +M +    P+ + Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V+ LC+      A + +E+MA     P+   +N  + GLC   +V+ A  L ++M +  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             PN+ TYN L++GL +  R++ A+EL  E+   G     V+YNT++ G C+   +V A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +  KM+      + +T+  +I    K GKV  A ++LD +   G   P++ +Y+ L+ G
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG-VTPNVATYSCLIDG 298

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            C    + EA   L++M+ +GI P   T+N+L+ SL
Sbjct: 299 FCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 334



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 154/337 (45%), Gaps = 57/337 (16%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IEK+      D + Y              G  +  +   +R+   + AL     +   G
Sbjct: 102 LIEKMARYAPPDALTY--------------GPIVERLCKTKRI---DDALATVEEMATRG 144

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP   IYN +L  L  E +      ++  M +  + PNV TYN L+  LCK  R++ AY
Sbjct: 145 IKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAY 204

Query: 121 KLLVEMGNKG-----------------------------------CAPDAVSYTTIVSSI 145
           +L  EM  KG                                   C P+ V+YTT++  +
Sbjct: 205 ELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGL 264

Query: 146 CKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            K G+V+ A E+    ++ G    V+ Y+ LI+G CK  +++EA  LL +MV +GI P V
Sbjct: 265 SKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTV 324

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY+ +++SLC    +E +  +   M  R C+P + ++ +LL+      +   A  L+  
Sbjct: 325 VTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           MI +G  P+ + Y TL  GL   G + EA  +  +M+
Sbjct: 385 MIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 5/238 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   I+    L ++M  +G   +E  + ++I+ + +      A  +F ++    
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 249

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L    +      +   M + G+ PNV TY+ L+   CK  RVD A+
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           KLL +M  +G AP  V+Y  +++S+C+  ++E+A +L       R    V  YN L+  L
Sbjct: 310 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C   +++ A  L  EM+ +G  P+ ITY T+   L   G V  +  ++ +M +   NP
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/572 (29%), Positives = 289/572 (50%), Gaps = 27/572 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREF 59
           +IE      +   +  +  +MK E     E  FI V  +Y +  L E+A+++F R + EF
Sbjct: 86  LIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEF 145

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYS--NMKRDGMEPNVFTYNILLKALCKNNRVD 117
             + TV+ +N +L+ ++ E  F      Y      +  + PNV ++N+++KA+CK   VD
Sbjct: 146 QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVD 205

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR--FGSGVSVYNAL 171
            A ++  EM  + C PD  +Y T++  +CK  +++EA     E+ +   F S V+ +N L
Sbjct: 206 RAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVT-FNVL 264

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           INGLCK+  +     L+  M  +G  PN +TY+TII+ LC  G ++ ++ +L +M    C
Sbjct: 265 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 324

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN  ++ +L+ G +  GR+ +   L + +   G   N  AYSTLI GL      +EA+ 
Sbjct: 325 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 384

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M E  C PN+  YSALIDG  + G L  A +I   M++ GC+PN   Y+ ++K   
Sbjct: 385 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 444

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  + ++MA  NC PN + ++  I GLC  G++  AM +   M      P++ 
Sbjct: 445 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 504

Query: 412 TYNELLDGLLRVNRVKEAFELVTEI--EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
            Y+ ++ GL     V+   +L  E+  ++   Q ++VTYN +L  +C+   +  A  LL 
Sbjct: 505 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 564

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            ML  G   D IT NI + A  ++         L+  + G E+  +++        I  +
Sbjct: 565 SMLDRGCNPDLITCNIFLNALREK---------LNPPQDGREFLDELVVRLHKRQRIVGA 615

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             + E  + LQK L     PN +TW  ++  L
Sbjct: 616 AKIIE--VMLQKFLP----PNASTWERIIPEL 641



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 240/497 (48%), Gaps = 15/497 (3%)

Query: 81  FSMINPIYSNMKRDGMEPNVF---TYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAV 136
           F  +  ++  MKR   E  VF    + ++ +A  K +  + A +L   M ++  C     
Sbjct: 96  FGTLFQVFDRMKR---ERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVR 152

Query: 137 SYTTIVSSICKLGQVEEAREL-------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           S+ ++++ I + G    A E               V  +N +I  +CK   ++ A  +  
Sbjct: 153 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 212

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  +  +P+V TY T++  LC    ++ ++ +L +M + GC P+  +F  L+ G    G
Sbjct: 213 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 272

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
                + L + M  +G +PN V Y+T+I+GLC  G +D+AVS+  +M  + C PN  TY 
Sbjct: 273 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 332

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI+G  K G  +    + + +   G   N  AY+ ++  L +     +A  L +KM  +
Sbjct: 333 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 392

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            C PN V ++  I GLC  G++D A ++L +M    C PN  TY+ L+ G  +    ++A
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             +  E+ K     N + Y+ ++HG+C  G + EA  +   ML  G + D + ++ +I+ 
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 512

Query: 490 YCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            C  G V   ++L + +     +  PD+++Y  LL  +C    +  A   L  ML+ G  
Sbjct: 513 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 572

Query: 549 PNFATWNVLVRSLFSNL 565
           P+  T N+ + +L   L
Sbjct: 573 PDLITCNIFLNALREKL 589



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 209/455 (45%), Gaps = 63/455 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++  ID    LL +M++EG                                   
Sbjct: 229 LMDGLCKEDRIDEAVLLLDEMQIEGCF--------------------------------- 255

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+   +N +++ L  +     +  +  NM   G  PN  TYN ++  LC   ++D A 
Sbjct: 256 --PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAV 313

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL  M    C P+ V+Y T+++ + K G+  +   L          +    Y+ LI+GL
Sbjct: 314 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL 373

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            KE K EEA  L  +MV++G  PN++ YS +I  LC  G ++ +  IL +M  +GC PN 
Sbjct: 374 FKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNA 433

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+KG+   G + +A  +W  M +   +PN + YS LIHGLC +G + EA+ +   
Sbjct: 434 FTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTH 493

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI--SNGCSPNVVAYTCMVKVLCQN 353
           M      P+V  YS++I G   AG++    +++N M+   +   P+VV Y  +++ LC+ 
Sbjct: 494 MLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQ 553

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKG---------------------LCGCGRVD 392
           N    A  L+  M    C P+ +T N F+                       L    R+ 
Sbjct: 554 NSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIV 613

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            A K+++ M Q    PN +T+  ++  L +  +V+
Sbjct: 614 GAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 137/283 (48%), Gaps = 20/283 (7%)

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           +T+ +LI+ +A +G+     Q+++RM           +  + +   + ++  +A  L  +
Sbjct: 81  STFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGR 140

Query: 366 MAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC--------LPNITTYNEL 416
           M  E  C     +FN+ +  +   G    A++       YEC         PN+ ++N +
Sbjct: 141 MVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEF------YECGVGGKTNISPNVLSFNLV 194

Query: 417 LDGLLRVNRVKEAFELVTE--IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +  + ++  V  A E+  E  I+KC  + ++ TY T++ G+C+   + EA  LL +M IE
Sbjct: 195 IKAMCKLGLVDRAIEVFREMAIQKC--EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE 252

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G    ++TFN++I   CK+G +    +L+D +   G   P+ ++Y +++ G+C  G + +
Sbjct: 253 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG-CVPNEVTYNTIINGLCLKGKLDK 311

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           A   L +M+     PN  T+  L+  L      +  V++L  +
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 354


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/572 (29%), Positives = 289/572 (50%), Gaps = 27/572 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREF 59
           +IE      +   +  +  +MK E     E  FI V  +Y +  L E+A+++F R + EF
Sbjct: 70  LIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEF 129

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYS--NMKRDGMEPNVFTYNILLKALCKNNRVD 117
             + TV+ +N +L+ ++ E  F      Y      +  + PNV ++N+++KA+CK   VD
Sbjct: 130 QCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVD 189

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR--FGSGVSVYNAL 171
            A ++  EM  + C PD  +Y T++  +CK  +++EA     E+ +   F S V+ +N L
Sbjct: 190 RAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVT-FNVL 248

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           INGLCK+  +     L+  M  +G  PN +TY+TII+ LC  G ++ ++ +L +M    C
Sbjct: 249 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKC 308

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN  ++ +L+ G +  GR+ +   L + +   G   N  AYSTLI GL      +EA+ 
Sbjct: 309 VPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMG 368

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M E  C PN+  YSALIDG  + G L  A +I   M++ GC+PN   Y+ ++K   
Sbjct: 369 LWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFF 428

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  + ++MA  NC PN + ++  I GLC  G++  AM +   M      P++ 
Sbjct: 429 KTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVV 488

Query: 412 TYNELLDGLLRVNRVKEAFELVTEI--EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
            Y+ ++ GL     V+   +L  E+  ++   Q ++VTYN +L  +C+   +  A  LL 
Sbjct: 489 AYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLN 548

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            ML  G   D IT NI + A  ++         L+  + G E+  +++        I  +
Sbjct: 549 SMLDRGCNPDLITCNIFLNALREK---------LNPPQDGREFLDELVVRLHKRQRIVGA 599

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             + E  + LQK L     PN +TW  ++  L
Sbjct: 600 AKIIE--VMLQKFLP----PNASTWERIIPEL 625



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 240/497 (48%), Gaps = 15/497 (3%)

Query: 81  FSMINPIYSNMKRDGMEPNVF---TYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAV 136
           F  +  ++  MKR   E  VF    + ++ +A  K +  + A +L   M ++  C     
Sbjct: 80  FGTLFQVFDRMKR---ERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVR 136

Query: 137 SYTTIVSSICKLGQVEEAREL-------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           S+ ++++ I + G    A E               V  +N +I  +CK   ++ A  +  
Sbjct: 137 SFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFR 196

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  +  +P+V TY T++  LC    ++ ++ +L +M + GC P+  +F  L+ G    G
Sbjct: 197 EMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG 256

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
                + L + M  +G +PN V Y+T+I+GLC  G +D+AVS+  +M  + C PN  TY 
Sbjct: 257 DMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYG 316

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI+G  K G  +    + + +   G   N  AY+ ++  L +     +A  L +KM  +
Sbjct: 317 TLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEK 376

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            C PN V ++  I GLC  G++D A ++L +M    C PN  TY+ L+ G  +    ++A
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             +  E+ K     N + Y+ ++HG+C  G + EA  +   ML  G + D + ++ +I+ 
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496

Query: 490 YCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            C  G V   ++L + +     +  PD+++Y  LL  +C    +  A   L  ML+ G  
Sbjct: 497 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 556

Query: 549 PNFATWNVLVRSLFSNL 565
           P+  T N+ + +L   L
Sbjct: 557 PDLITCNIFLNALREKL 573



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 209/455 (45%), Gaps = 63/455 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++  ID    LL +M++EG                                   
Sbjct: 213 LMDGLCKEDRIDEAVLLLDEMQIEGCF--------------------------------- 239

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+   +N +++ L  +     +  +  NM   G  PN  TYN ++  LC   ++D A 
Sbjct: 240 --PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAV 297

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL  M    C P+ V+Y T+++ + K G+  +   L          +    Y+ LI+GL
Sbjct: 298 SLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGL 357

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            KE K EEA  L  +MV++G  PN++ YS +I  LC  G ++ +  IL +M  +GC PN 
Sbjct: 358 FKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNA 417

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+KG+   G + +A  +W  M +   +PN + YS LIHGLC +G + EA+ +   
Sbjct: 418 FTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTH 477

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI--SNGCSPNVVAYTCMVKVLCQN 353
           M      P+V  YS++I G   AG++    +++N M+   +   P+VV Y  +++ LC+ 
Sbjct: 478 MLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQ 537

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKG---------------------LCGCGRVD 392
           N    A  L+  M    C P+ +T N F+                       L    R+ 
Sbjct: 538 NSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIV 597

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            A K+++ M Q    PN +T+  ++  L +  +V+
Sbjct: 598 GAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 137/283 (48%), Gaps = 20/283 (7%)

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           +T+ +LI+ +A +G+     Q+++RM           +  + +   + ++  +A  L  +
Sbjct: 65  STFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGR 124

Query: 366 MAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC--------LPNITTYNEL 416
           M  E  C     +FN+ +  +   G    A++       YEC         PN+ ++N +
Sbjct: 125 MVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEF------YECGVGGKTNISPNVLSFNLV 178

Query: 417 LDGLLRVNRVKEAFELVTE--IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +  + ++  V  A E+  E  I+KC  + ++ TY T++ G+C+   + EA  LL +M IE
Sbjct: 179 IKAMCKLGLVDRAIEVFREMAIQKC--EPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE 236

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G    ++TFN++I   CK+G +    +L+D +   G   P+ ++Y +++ G+C  G + +
Sbjct: 237 GCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG-CVPNEVTYNTIINGLCLKGKLDK 295

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           A   L +M+     PN  T+  L+  L      +  V++L  +
Sbjct: 296 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 338


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 174/638 (27%), Positives = 302/638 (47%), Gaps = 79/638 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++ +L E   +  V  +++ ++ +   C E V +SVI +Y +  + ++AL +F R+RE F
Sbjct: 49  ILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIF 108

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P ++ YN +L+A +   ++  +  +++  +  G+ PN+ TYN+L+K  CK    + A
Sbjct: 109 GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
              L  M  +G  PD  SY+T+++ + K G++++A EL       R    V+ YN LI+G
Sbjct: 169 RGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDG 228

Query: 175 LCKE--HKIEEAFWLLCEMVDRGIDPNV-------------------------------- 200
             KE  HK+    W    + D  + PNV                                
Sbjct: 229 FLKEKDHKMAMQLWDKL-LEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNERE 287

Query: 201 ---ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
               TYS++I  LCD GNV+ +  +  ++  R    ++ ++ ++L G+   G+  E+ +L
Sbjct: 288 KDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLEL 347

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           W R++ +    N+V+Y+ LI GL  NG +DEA  +   M       + TTY   I G   
Sbjct: 348 W-RIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCV 406

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G +  A  +   + S G   +V AY  ++  LC+     +A +L+++M+      N+  
Sbjct: 407 NGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHV 466

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            N  I GL    R+  A  L+  M +  CLP + +YN L+ GL    +  EA   V E+ 
Sbjct: 467 CNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEML 526

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G++ ++ TY+ +L G+CR   +  A +L  + L  G + D +  NI+I+  C  GK++
Sbjct: 527 ENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLD 586

Query: 498 NAIQLL--------------------------DRIRGGGEW--------NPDIISYTSLL 523
           +A+ ++                          D  R    W         PDIISY ++L
Sbjct: 587 DAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTIL 646

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C    +  A  +     N GI P   TWN+LVR++
Sbjct: 647 KGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 226/529 (42%), Gaps = 75/529 (14%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K E +  +  L  M  EG       + +VIN   + G  + AL++F  + E  + P V 
Sbjct: 161 KKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVT 220

Query: 67  IYNHILDALLAENRFSM-------------INP-----------------------IYSN 90
            YN ++D  L E    M             + P                       I+  
Sbjct: 221 CYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDR 280

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           MK++  E +++TY+ L+  LC    VD A  +  E+  +    D V+Y T++   C+ G+
Sbjct: 281 MKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGK 340

Query: 151 VEEAREL----AMRFGSGVSVYNALINGLCKEHKIEEA--FWLLC--------------- 189
           ++E+ EL      R    +  YN LI GL +  KI+EA   W L                
Sbjct: 341 IKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIF 400

Query: 190 ------------------EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
                             E+  +G   +V  Y++II  LC    +E +  ++ +M   G 
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGV 460

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             N H   +L+ G +   R  +AS L   M + G LP VV+Y+ LI GLC  G   EA +
Sbjct: 461 ELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASA 520

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +M EN   P++ TYS L+ G  +   +  A ++W++ + +G  P+V+ +  ++  LC
Sbjct: 521 FVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLC 580

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
                  A +++  M   NC  N VT+NT ++G       + A  +   M +    P+I 
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDII 640

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           +YN +L GL   +RV  A E   +    GI   + T+N ++  V    M
Sbjct: 641 SYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRKM 689



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 151/292 (51%), Gaps = 4/292 (1%)

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++I     N   D A+ V  +M E   C P + +Y+ L++ F +A   +    ++    +
Sbjct: 83  SVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFET 142

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G +PN+  Y  ++K+ C+   F +A   +  M  E   P+  +++T I  L   G++D 
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDD 202

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTIL 452
           A++L D+M +    P++T YN L+DG L+    K A +L  + +E   +  N+ T+N ++
Sbjct: 203 ALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMI 262

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+ + G V +  ++  +M     + D  T++ +I+  C +G V+ A  + + +     +
Sbjct: 263 SGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAF 322

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             D+++Y ++L G C  G ++E+ + L +++ +    N  ++N+L++ L  N
Sbjct: 323 -IDVVTYNTMLGGFCRCGKIKES-LELWRIMEQRNSVNIVSYNILIKGLLEN 372



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 145/355 (40%), Gaps = 30/355 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L E  +ID    + + M  +G +     +   I+     G   +AL +   +   G
Sbjct: 365 LIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKG 424

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  I+D L  + R    + +   M + G+E N    N L+  L +++R+  A 
Sbjct: 425 GHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDAS 484

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L+  MG  GC P  VSY                              N LI GLC+  K
Sbjct: 485 LLMRGMGKNGCLPTVVSY------------------------------NILICGLCEAGK 514

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             EA   + EM++ G+ P++ TYS ++  LC    +E +L +  Q    G  P++     
Sbjct: 515 FGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNI 574

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G+  +A  +   M       N+V Y+TL+ G       + A  +   M +  
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMG 634

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
             P++ +Y+ ++ G      +  A + ++   ++G  P V  +  +V+ +    M
Sbjct: 635 LQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVNRKM 689



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 20/217 (9%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC-------LPNITTY--NELLDGLLRV- 423
           + V ++  ++ L     V    ++++ ++  EC       L  I TY  N + D  L V 
Sbjct: 42  SAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRALDVF 101

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R++E F         G +  I +YNT+L+    A   V+   L       G   +  T+
Sbjct: 102 KRMREIF---------GCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTY 152

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N++I   CK+ +   A   L+ +   G + PD+ SY++++  +  +G + +A     +M 
Sbjct: 153 NVLIKMSCKKKEFEKARGFLNWMWKEG-FKPDVFSYSTVINDLAKTGKLDDALELFDEMS 211

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              + P+   +N+L+        H   + + D ++ +
Sbjct: 212 ERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLED 248



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 6/123 (4%)

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   + V Y+ IL  +  A MV    +++  +  +  K D      +I  Y K    + A
Sbjct: 38  GYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTYGKNSMPDRA 97

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSG---GMQEAFIYLQKMLNEGICPNFATWNV 556
           + +  R+R      P I SY +LL     +     ++  F Y +     G+ PN  T+NV
Sbjct: 98  LDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFE---TAGVAPNLQTYNV 154

Query: 557 LVR 559
           L++
Sbjct: 155 LIK 157


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 164/564 (29%), Positives = 273/564 (48%), Gaps = 19/564 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           ++D    LL +M      CS  +  F  VIN   R    ++A  +  R    G +P    
Sbjct: 24  QLDRAMLLLDEM-----PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVT 78

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN  +D L    R      +   M      P   TY  L+  L K  R+D A  +L +M 
Sbjct: 79  YNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMV 138

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIE 182
            KG +P   +YT ++  + K G+VEEAR + +   G+G      VY ALI+GL K  K++
Sbjct: 139 EKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLD 198

Query: 183 EAFWLLCEMVD----RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
           EA   L +MV+    RG++P+V+ ++ +I  LC  GN+E +L    ++     +    +F
Sbjct: 199 EALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTF 257

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             L+       RT EA     +M      P +  Y++L+ G    G +DEA+    +  E
Sbjct: 258 NPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVE 317

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+  TY+++IDG  K G +    + ++ M + G  P+ V Y  ++    +  M  +
Sbjct: 318 RGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPK 377

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           AH +  +M       +TVT+N  + GLC  GRV  A      M++  C+  + TY+ L+D
Sbjct: 378 AHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMD 437

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G      V  A EL   +   G + N+V+YN I+ G+CRAG + +A+    K+L      
Sbjct: 438 GFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 497

Query: 479 DAITFNIIIYAYCKQ-GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           D  TFN  ++  C++   V + ++L + +   G  +P++ SY+ L+ GIC +GG++    
Sbjct: 498 DVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGT-SPNLHSYSILMDGICRAGGLEVTLE 556

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
              +M++ G+ P+   +N L+R L
Sbjct: 557 IFHEMVSRGVAPDVVVFNTLIRWL 580



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 254/508 (50%), Gaps = 49/508 (9%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG 162
           LL  LCK  ++D A  LL EM    C+PD V++T +++ +C+  +++EA    E A+R G
Sbjct: 15  LLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71

Query: 163 --SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
                  YN  I+GLCK  ++++AF LL +M ++   P  +TY+ ++  L   G ++ ++
Sbjct: 72  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            IL QM  +G +P + ++T ++ G    GR  EA  ++  M+  G  P+   Y+ LI GL
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191

Query: 281 CSNGSMDEAVSVSYQMEENSCP----PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
              G +DEA+    QM EN C     P+V  ++ +I     +GNL  A   ++ +  +  
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSL 250

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC-P----------------------- 372
                 +  +V  LC+     +A + ++KM+   C P                       
Sbjct: 251 DLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALL 310

Query: 373 -----------PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
                      P+ VT+ + I GLC  GRV+   +   +M+     P+  TY  L+DG +
Sbjct: 311 QLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 370

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   + +A  +  ++ + G  ++ VTYN IL G+C+AG V EA+     M   G     +
Sbjct: 371 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 430

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T++ ++  +C +G V+ A++L  R+   G   P+++SY  ++ G+C +G + +A+ Y +K
Sbjct: 431 TYSALMDGFCSEGNVSAAVELFRRMLDRG-CEPNLVSYNIIIRGLCRAGKLAKAYFYFEK 489

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLG 569
           +L   +CP+  T+N  +  L   L  +G
Sbjct: 490 LLQRRLCPDVYTFNSFLHGLCQRLDTVG 517



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 255/517 (49%), Gaps = 48/517 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I+ L +   +D    LL++M  +    +   + ++++   + G  ++A+ +  ++ E G
Sbjct: 82  FIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKG 141

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT+K Y  ++D L    R      I+ +M  +G  P+ F Y  L+  L K  ++D A 
Sbjct: 142 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEAL 201

Query: 121 KLLVEMGNKGCA----PDAVSYTTIVSSICKLGQVEEA---------------------- 154
             L +M   GCA    PD V +  ++  +C  G +E+A                      
Sbjct: 202 VYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLV 261

Query: 155 --------RELAMRFGSGVS---------VYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
                    E A+ F   +S          Y +L++G  K  +++EA   L E V+RG  
Sbjct: 262 AALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFI 321

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+ +TY++II  LC +G VE       +M  RG  P+  ++ +L+ G++      +A  +
Sbjct: 322 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 381

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           + +M++ G + + V Y+ ++ GLC  G + EA +    MEE  C   V TYSAL+DGF  
Sbjct: 382 YRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCS 441

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            GN+  A +++ RM+  GC PN+V+Y  +++ LC+     +A+   EK+      P+  T
Sbjct: 442 EGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYT 501

Query: 378 FNTFIKGLCGCGRVDW---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           FN+F+ GL  C R+D     ++L + M      PN+ +Y+ L+DG+ R   ++   E+  
Sbjct: 502 FNSFLHGL--CQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFH 559

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           E+   G+  ++V +NT++  +C AG V EA ++  ++
Sbjct: 560 EMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL 596



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 234/475 (49%), Gaps = 42/475 (8%)

Query: 139 TTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           T +++ +CK GQ++ A  L   M     +  +  +INGLC+E +++EAF +L   V  G 
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGC 72

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +P+ +TY+  I  LC    V+ +  +L +M  + C P   ++T+L+ G L  GR  EA  
Sbjct: 73  EPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMA 132

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +  +M+ +G  P +  Y+ +I GL   G ++EA  +   M  N C P+   Y+ALI G A
Sbjct: 133 ILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLA 192

Query: 317 KAGNLLGASQIWNRMISNGCS----PNVV------------------------------- 341
           K G L  A    N+M+ NGC+    P+VV                               
Sbjct: 193 KIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDL 252

Query: 342 ---AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
               +  +V  LC+     +A + ++KM+   C P   T+ + + G    GR+D A+  L
Sbjct: 253 THFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQL 312

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +  +   +P+  TY  ++DGL ++ RV+E  E   E+   G + + VTY  ++ G  +A
Sbjct: 313 KEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA 372

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            M+ +A ++  +ML  GT +  +T+NII+   CK G+V  A      +   G     +++
Sbjct: 373 KMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG-CVATVVT 431

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           Y++L+ G C+ G +  A    ++ML+ G  PN  ++N+++R L    G L   Y 
Sbjct: 432 YSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGL-CRAGKLAKAYF 485



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 157/313 (50%), Gaps = 7/313 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + S+I+   ++G  E+  + F+ +R  G +P    Y  ++D  +        + +Y  M 
Sbjct: 327 YTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML 386

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G   +  TYNI+L  LCK  RV  AY   + M  +GC    V+Y+ ++   C  G V 
Sbjct: 387 QSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVS 446

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A EL  R         +  YN +I GLC+  K+ +A++   +++ R + P+V T+++ +
Sbjct: 447 AAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFL 506

Query: 208 SSLCD-VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
             LC  +  V   + +   M  +G +PN+HS++ L+ G    G      ++++ M+  G 
Sbjct: 507 HGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGV 566

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+VV ++TLI  LC  G +DEA+ V  ++E  S  P+  +Y +L+D  ++   +  A  
Sbjct: 567 APDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARL 625

Query: 327 IWNRMISNGCSPN 339
           +   M   GC+P 
Sbjct: 626 LSFHMKLQGCAPR 638



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 43/227 (18%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +T      + GLC  G++D AM LLD+M    C P++  +  +++GL R  R+ EAF ++
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM------------------LIEG 475
               + G + + VTYN  + G+C+A  V +AFQLL KM                  L++ 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 476 TKLDAI-----------------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            +LD                   T+ ++I    K G+V  A ++   + G G   PD   
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG-CRPDAFV 183

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLN----EGICPNFATWNVLVRSL 561
           YT+L+ G+   G + EA +YL +M+      G+ P+    N+++R L
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQL 230



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +I+   +D      ++   CK G+++ A+ LLD +      +PD++++T ++ G+C    
Sbjct: 1   MIDRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEM----PCSPDMVAFTVVINGLCREKR 56

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + EAF  L++ +  G  P++ T+NV +  L
Sbjct: 57  LDEAFSVLERAVRAGCEPDYVTYNVFIDGL 86


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/568 (30%), Positives = 272/568 (47%), Gaps = 43/568 (7%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S SE    S++   R+ G  E+AL +  R+ EFG+ P + +YN ++D+L     F     
Sbjct: 329 SPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAEL 388

Query: 87  IYSNM-----------------------KRD------------GMEPNVFTYNILLKALC 111
           ++  M                       K D            G++P+V+ YN L+   C
Sbjct: 389 LFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHC 448

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV--SVY 168
           K   +  A  L+ EM NK   P  V+YT+++   C  G++ +A  L     G G+  S+Y
Sbjct: 449 KFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY 508

Query: 169 --NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
               L++GL +   I +A  L  EM +  + PN +TY+ +I   C+ GN+  +   L +M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEM 568

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             +G  P+ +S+  L+ G  L G+  EA    + + +     N + Y+ L+HG C  G +
Sbjct: 569 IEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKL 628

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA+SV   M       ++  Y  LIDG  K  +      +   M   G  P+ V YT M
Sbjct: 629 EEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSM 688

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +    +   F +A  + + M  E C PN VT+   I GLC  G V+ A  L  +M+    
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNS 748

Query: 407 LPNITTYNELLDGLLR-VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           +PN  TY   LD L + V  +K+A EL   I K G+  N  TYN ++ G CR G + EA 
Sbjct: 749 VPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEAS 807

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +L+ +M+ +G   D IT+  +I   C++  V  AI+L + +   G   PD ++Y +L+ G
Sbjct: 808 ELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKG-IRPDRVAYNTLIHG 866

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            C +G M +A     +ML +G+ PN  T
Sbjct: 867 CCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 258/527 (48%), Gaps = 9/527 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           +R  GLA   +++F  +   G++P V IY  ++ +L      S    +   M+  G + N
Sbjct: 205 FRHFGLA---MELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVN 261

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE--- 156
           +  YN+L+  LCK  +V  A  +  ++  K   PD V+Y T+V  +CK+ + E   E   
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMID 321

Query: 157 --LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             L +RF    +  ++L+ GL K  K+EEA  L+  + + G+ PN+  Y+ +I SLC   
Sbjct: 322 EMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGR 381

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           N + +  +  +M   G  PN  +++ L+  +   G+   A      MI  G  P+V  Y+
Sbjct: 382 NFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYN 441

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +LI+G C  G +  A S+  +M      P V TY++L+ G+   G +  A ++++ M   
Sbjct: 442 SLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P++  +T ++  L +  +   A  L  +MA  N  PN VT+N  I+G C  G +  A
Sbjct: 502 GIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKA 561

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            + L++M +   +P+  +Y  L+ GL    +  EA   V  + K   +LN + Y  +LHG
Sbjct: 562 FEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHG 621

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            CR G + EA  +   M + G  LD + + ++I    K       + LL  +   G   P
Sbjct: 622 FCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG-LKP 680

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D + YTS++     +G  +EAF     M+NEG  PN  T+  ++  L
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 244/474 (51%), Gaps = 8/474 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M +  + P V T + LL  L K      A +L  +M N G  PD   YT ++ S+C+L  
Sbjct: 183 MTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKD 242

Query: 151 VEEARELAMRF-GSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +  A+E+ ++   +G  V    YN LI+GLCK+ K+ EA  +  ++  + + P+V+TY T
Sbjct: 243 LSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCT 302

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  LC V   E  L ++ +M     +P+  + +SL++G    G+  EA +L  R+   G
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFG 362

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN+  Y+ LI  LC   + DEA  +  +M +    PN  TYS LID F + G L  A 
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
                MI  G  P+V  Y  ++   C+      A SL+ +M  +   P  VT+ + + G 
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGY 482

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G+++ A++L  +M     +P+I T+  LL GL R   +++A +L TE+ +  ++ N 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR 542

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYN ++ G C  G + +AF+ L +M+ +G   D  ++  +I+  C  G+ + A   +D 
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 506 I-RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + +G  E N   I YT LL G C  G ++EA    Q M   G+  +   + VL+
Sbjct: 603 LHKGNCELNE--ICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI 654



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 246/508 (48%), Gaps = 7/508 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +    D  + L  +M   G+  ++  +  +I+ + R G  + AL     + + G
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG 432

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP+V  YN +++        S    + + M    +EP V TY  L+   C   +++ A 
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L  EM  KG  P   ++TT++S + + G + +A +L               YN +I G 
Sbjct: 493 RLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGY 552

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E  + +AF  L EM+++GI P+  +Y  +I  LC  G    +   +  +    C  N 
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T LL G+   G+  EA  +   M   G   ++V Y  LI G   +      + +  +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+++ID  +K G+   A  IW+ MI+ GC PN V YT ++  LC+   
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLC-GCGRVDWAMKLLDQMKQYECLPNITTYN 414
            ++A  L  KM   N  PN VT+  F+  L  G G +  A++L + + +   L N  TYN
Sbjct: 733 VNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-GLLANTATYN 791

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G  R  R++EA EL+T +   G+  + +TY T++  +CR   V +A +L   M  +
Sbjct: 792 MLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK 851

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           G + D + +N +I+  C  G++  A +L
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATEL 879



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 217/449 (48%), Gaps = 7/449 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   + L+ +M  + +  +   + S++  Y   G   +AL++++ +   G+ P++  + 
Sbjct: 452 DISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFT 511

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L           +++ M    ++PN  TYN++++  C+   +  A++ L EM  K
Sbjct: 512 TLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK 571

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEA 184
           G  PD  SY  ++  +C  GQ  EA+        G        Y  L++G C+E K+EEA
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M  RG+D +++ Y  +I       + +  LG+L +M  RG  P+   +TS++  
Sbjct: 632 LSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDA 691

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   EA  +W+ MI EG +PN V Y+ +I+GLC  G ++EA  +  +M   +  PN
Sbjct: 692 KSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPN 751

Query: 305 VTTYSALIDGFAKA-GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
             TY   +D   K  G++  A ++ N ++  G   N   Y  +++  C+     +A  LI
Sbjct: 752 QVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELI 810

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M  +   P+ +T+ T I  LC    V  A++L + M +    P+   YN L+ G    
Sbjct: 811 TRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             + +A EL  E+ + G++ N  T  T +
Sbjct: 871 GEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 162/330 (49%), Gaps = 1/330 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P + + ++LL G +       A +L++ MI  G  P+V  Y+ +I  LC    +  A  +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QME   C  N+  Y+ LIDG  K   +  A  I   +      P+VV Y  +V  LC+
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
              F     +I++M      P+    ++ ++GL   G+V+ A+ L+ ++ ++   PNI  
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+D L +     EA  L   + K G+  N VTY+ ++   CR G +  A   LG+M+
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G K     +N +I  +CK G ++ A  L+  +    +  P +++YTSL+ G C+ G +
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINK-KLEPTVVTYTSLMGGYCSKGKI 488

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +A     +M  +GI P+  T+  L+  LF
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLF 518



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 5/272 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           Q M + GV      +  +I+   +    +  L +   + + GLKP   IY  ++DA    
Sbjct: 636 QDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
             F     I+  M  +G  PN  TY  ++  LCK   V+ A  L  +M      P+ V+Y
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTY 755

Query: 139 TTIVSSICK-LGQVEEARELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVD 193
              +  + K +G +++A EL      G+    + YN LI G C++ ++EEA  L+  M+ 
Sbjct: 756 GCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIG 815

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
            G+ P+ ITY+T+IS LC   +V+ ++ +   M  +G  P+  ++ +L+ G  + G   +
Sbjct: 816 DGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           A++L N M+R+G  PN     T I    S+ S
Sbjct: 876 ATELRNEMLRQGLKPNTETSETTISNDSSSKS 907


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 257/512 (50%), Gaps = 8/512 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L +     G + +L+ M    +      F  V+ SY R G    A+++   +++ G
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAG 199

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + I N  +  L+  NR          M+   +EPNV TYN L+K  C  +R++ A 
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 259

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +L+ EM  KGC+PD +SY T++  +CK  +++E R L  +     ++      YN  ++ 
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHM 319

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K    +EA   L E  +R    + + YS I+ S C  G ++ +  I+ +MF +GC P+
Sbjct: 320 LSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD 379

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++TS++ G     +  +A  +  +M + G  PN V+Y+ L++GLC NG+  EA  +  
Sbjct: 380 VVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             EE+   PN  TYS L+ GF + G    A  +   MI  G  P  V    +++ LCQ  
Sbjct: 440 MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A   +E+     C  N V F T I G C    ++ A+ LLD M      P++ TY 
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++D L +  R++EA +L  ++ + G+    VTY T++H  CR G V +  +LL KML  
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
                A  +N +I   C  G +  A +LL ++
Sbjct: 620 QECRTA--YNQVIEKLCSFGNLEQAYKLLGKV 649



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 221/465 (47%), Gaps = 42/465 (9%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRF 161
           Y  +L+ L K     GA ++L  M  +       ++  ++ S  + G++  A R L M  
Sbjct: 137 YYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQ 196

Query: 162 GSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +G+    S+ N  I+ L   +++++A   L  M    I+PNVITY+ +I   CD+  +E
Sbjct: 197 KAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLE 256

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVAYSTL 276
            ++ ++ +M  +GC+P+  S+ +++       R  E   L  +M+++   LP+ V Y+T 
Sbjct: 257 DAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTF 316

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +H L  +G  DEA+    + EE     +   YSA++  F                     
Sbjct: 317 VHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSF--------------------- 355

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
                         C+     +A  ++ +M  + C P+ VT+ + I GLC   +VD A K
Sbjct: 356 --------------CREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKK 401

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +L QM ++ C PN  +Y  LL+GL +     EA E++   E+     N +TY+ ++HG  
Sbjct: 402 MLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFR 461

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           R G   EA  L+ +M+ +G     +  N++I + C++ KV+ A + +++    G    ++
Sbjct: 462 REGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG-CAVNV 520

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +++T+++ G C    ++ A   L  M      P+  T+  ++ +L
Sbjct: 521 VNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 178/366 (48%), Gaps = 4/366 (1%)

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           DP  I Y  ++  L      + +  +L  M  R       +F  ++  Y   G+   A  
Sbjct: 133 DP--IVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR 190

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +   M + G  P++   +T IH L     +D+AV    +M+     PNV TY+ LI G+ 
Sbjct: 191 VLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYC 250

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNT 375
               L  A ++   M   GCSP+ ++Y  ++  LC+     +   L+EKM  + N  P+ 
Sbjct: 251 DLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQ 310

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+NTF+  L   G  D A++ L + ++     +   Y+ ++    R  R+ +A E+V E
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G   ++VTY ++++G+C+   V +A ++L +M   G K + +++  ++   CK G 
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
              A ++++ +     W P+ I+Y+ L+ G    G   EA   +++M+ +G  P     N
Sbjct: 431 SLEAREMMN-MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 489

Query: 556 VLVRSL 561
           +L++SL
Sbjct: 490 LLIQSL 495



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/428 (22%), Positives = 179/428 (41%), Gaps = 76/428 (17%)

Query: 11  IDGVQYLLQQM-KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           I  V+ L+++M K   +   +  + + ++   + G  ++AL+      E   +     Y+
Sbjct: 290 IKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYS 349

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+ +   E R      I + M   G  P+V TY  ++  LC+  +VD A K+L +M   
Sbjct: 350 AIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKH 409

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---------------------AMR-------- 160
           GC P+ VSYT +++ +CK G   EARE+                       R        
Sbjct: 410 GCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEA 469

Query: 161 ------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                       F + V + N LI  LC+E K++EA   + + ++ G   NV+ ++T+I 
Sbjct: 470 CDLVREMIKKGFFPTPVEI-NLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIH 528

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C   ++E +L +L  M++   +P++ ++T+++      GR  EA+ L  +M+R G +P
Sbjct: 529 GFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 588

Query: 269 NVVAYSTLI---------------------------------HGLCSNGSMDEAVSVSYQ 295
             V Y T+I                                   LCS G++++A  +  +
Sbjct: 589 TPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGK 648

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +   +   +  T   LI+ +   G  L +  +  RM +    P++     + K L     
Sbjct: 649 VLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGK 708

Query: 356 FHQAHSLI 363
             +A  LI
Sbjct: 709 SEEADKLI 716



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 7/191 (3%)

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           E   S+++ +Y + K     P+V TY  ++ AL K  R++ A KL ++M   G  P  V+
Sbjct: 537 EAALSLLDDMYLSNK----HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVT 592

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGV---SVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           Y T++   C++G+VE+  +L  +  S     + YN +I  LC    +E+A+ LL +++  
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 652

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
               +  T   +I S    G    S  +  +MF R   P++     + K  +L G++ EA
Sbjct: 653 ASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 712

Query: 255 SDLWNRMIREG 265
             L  R +  G
Sbjct: 713 DKLILRFVERG 723



 Score = 39.3 bits (90), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 2/161 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+K  I+    L  +M   G+  +   + +VI+ Y R+G  E  LK+  ++    
Sbjct: 561 IIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM--LS 618

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +     YN +++ L +         +   + R   + +  T ++L+++         +Y
Sbjct: 619 RQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSY 678

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            +   M N+   PD      +   +   G+ EEA +L +RF
Sbjct: 679 NVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRF 719


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 266/506 (52%), Gaps = 6/506 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+  F R+      P +  +N ILD+      +S    +   ++  G++P++ T NIL
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           +   C   ++   + +L ++  +G  PD V+  T++  +C  GQV++A     + LA  F
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y  LING+CK      A   L ++  R   P+V+ Y+TII ++C    V  + G
Sbjct: 161 QLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYG 220

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M V+G + ++ ++ +L+ G+ + G+  EA  L N M+ +   PNV  Y+ L+  LC
Sbjct: 221 LFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA SV   M +    P+V TYS L+DG+     +  A  ++N M   G +P+V 
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++   C+N M  +A +L ++M  +N  P  VT+++ I GLC  GR+ +   L+D+M
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +      ++ TY+ L+DGL +   +  A  L  +++   I+ NI T+  +L G+C+ G +
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A ++   +L +G  L+  T+N++I  +CKQG +  A+ +L ++   G   P+  ++ +
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG-CIPNAFTFET 519

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGI 547
           ++  +       +A   L++M+  G+
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 255/483 (52%), Gaps = 5/483 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++S+ ++     A+ + +R+   G++P +   N +++      + +    + + + 
Sbjct: 62  FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G  P+  T N L+K LC   +V  A     ++  +G   + VSY T+++ +CK+G   
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181

Query: 153 EA----RELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A    R++  R     V +YN +I+ +CK   + EA+ L  EM  +GI  +V+TY+T+I
Sbjct: 182 AAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLI 241

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C VG ++ ++G+L +M ++  NPN++++  L+      G+  EA  +   M++    
Sbjct: 242 YGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVK 301

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+V+ YSTL+ G      + +A  V   M      P+V TY+ LI+GF K   +  A  +
Sbjct: 302 PDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNL 361

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      P +V Y+ ++  LC++        LI++M     P + +T+++ I GLC 
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCK 421

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G +D A+ L ++MK  E  PNI T+  LLDGL +  R+K+A E+  ++   G  LN+ T
Sbjct: 422 NGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYT 481

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN +++G C+ G++ EA  +L KM   G   +A TF  II A  K+ + + A +LL ++ 
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMI 541

Query: 508 GGG 510
             G
Sbjct: 542 ARG 544



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 232/464 (50%), Gaps = 5/464 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +++++G+         +IN +  +G       +  +I + G  P     N ++  L 
Sbjct: 81  LSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLC 140

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +       +  +   G + N  +Y  L+  +CK      A K L ++  +   PD V
Sbjct: 141 LKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVV 200

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y TI+ ++CK   V EA     E+A++   + V  YN LI G C   K++EA  LL EM
Sbjct: 201 MYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEM 260

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V + I+PNV TY+ ++ +LC  G V+ +  +L  M      P++ ++++L+ GY L    
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEV 320

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++N M   G  P+V  Y+ LI+G C N  +DEA+++  +M + +  P + TYS+L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +     + + M   G   +V+ Y+ ++  LC+N    +A +L  KM  +  
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  TF   + GLC  GR+  A ++   +       N+ TYN +++G  +   ++EA  
Sbjct: 441 RPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALT 500

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++++E  G   N  T+ TI+  + +     +A +LL +M+  G
Sbjct: 501 MLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 206/407 (50%), Gaps = 1/407 (0%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R L MR    +  +N +++   K      A  L   +  +GI P++IT + +I+  C +G
Sbjct: 49  RMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMG 108

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +     +L ++  RG  P+  +  +L+KG  L G+  +A    ++++ +GF  N V+Y+
Sbjct: 109 QITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA 168

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI+G+C  G    A+    +++     P+V  Y+ +ID   K   +  A  +++ M   
Sbjct: 169 TLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVK 228

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G S +VV Y  ++   C      +A  L+ +M  +   PN  T+N  +  LC  G+V  A
Sbjct: 229 GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             +L  M +    P++ TY+ L+DG   V  VK+A  +   +   G+  ++ TY  +++G
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+  MV EA  L  +M  +      +T++ +I   CK G+++    L+D +R  G+   
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQ-PA 407

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D+I+Y+SL+ G+C +G +  A     KM ++ I PN  T+ +L+  L
Sbjct: 408 DVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGL 454



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 207/406 (50%), Gaps = 5/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++    +   ++  +G   ++  + ++IN   ++G    A+K   +I    
Sbjct: 135 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRL 194

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V +YN I+DA+      S    ++S M   G+  +V TYN L+   C   ++  A 
Sbjct: 195 TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAI 254

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM  K   P+  +Y  +V ++CK G+V+EA+  LA+   + V      Y+ L++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGY 314

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
              +++++A  +   M   G+ P+V TY+ +I+  C    V+ +L +  +M  +   P I
Sbjct: 315 FLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    GR     DL + M   G   +V+ YS+LI GLC NG +D A+++  +
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNK 434

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++    PN+ T++ L+DG  K G L  A +++  +++ G   NV  Y  M+   C+  +
Sbjct: 435 MKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGL 494

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             +A +++ KM    C PN  TF T I  L      D A KLL QM
Sbjct: 495 LEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 210/432 (48%), Gaps = 6/432 (1%)

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFW 186
            P  + +  I+ S  K+     A  L+ R    G+       N LIN  C   +I   F 
Sbjct: 56  TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +L +++ RG  P+ +T +T+I  LC  G V+ +L    ++  +G   N  S+ +L+ G  
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVC 175

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T  A     ++      P+VV Y+T+I  +C    + EA  +  +M       +V 
Sbjct: 176 KIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ LI GF   G L  A  + N M+    +PNV  Y  +V  LC+     +A S++  M
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM 295

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 P+ +T++T + G      V  A  + + M      P++ TY  L++G  +   V
Sbjct: 296 LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMV 355

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA  L  E+ +  +   IVTY++++ G+C++G +   + L+ +M   G   D IT++ +
Sbjct: 356 DEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSL 415

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I   CK G ++ AI L ++++   E  P+I ++T LL G+C  G +++A    Q +L +G
Sbjct: 416 IDGLCKNGHLDRAIALFNKMKDQ-EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474

Query: 547 ICPNFATWNVLV 558
              N  T+NV++
Sbjct: 475 YHLNVYTYNVMI 486



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 196/384 (51%), Gaps = 2/384 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P +I ++ I+ S   + +  T++ +  ++ ++G  P++ +   L+  +   G+      +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             ++++ G+ P+ V  +TLI GLC  G + +A+    ++       N  +Y+ LI+G  K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G+   A +   ++      P+VV Y  ++  +C+  +  +A+ L  +MA +    + VT
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +NT I G C  G++  A+ LL++M      PN+ TYN L+D L +  +VKEA  ++  + 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K  ++ +++TY+T++ G      V +A  +   M + G   D  T+ I+I  +CK   V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+ L   +       P I++Y+SL+ G+C SG +   +  + +M + G   +  T++ L
Sbjct: 357 EALNLFKEMHQKN-MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSL 415

Query: 558 VRSLFSNLGHLGPVYILDDIMANK 581
           +  L  N GHL     L + M ++
Sbjct: 416 IDGLCKN-GHLDRAIALFNKMKDQ 438



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 145/278 (52%), Gaps = 1/278 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++D+AVS   +M      P +  ++ ++D FAK  +   A  + +R+   G  P+++   
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C         S++ K+     PP+TVT NT IKGLC  G+V  A+   D++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               N  +Y  L++G+ ++   + A + + +I+    + ++V YNTI+  +C+  +V EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           + L  +M ++G   D +T+N +IY +C  GK+  AI LL+ +      NP++ +Y  L+ 
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMV-LKTINPNVYTYNILVD 277

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +C  G ++EA   L  ML   + P+  T++ L+   F
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYF 315



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 174/380 (45%), Gaps = 2/380 (0%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           ++S   S    + NV+ ++    +M      P I  F  +L  +        A  L +R+
Sbjct: 26  SHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL 85

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G  P+++  + LI+  C  G +    SV  ++ +   PP+  T + LI G    G +
Sbjct: 86  ELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQV 145

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A    +++++ G   N V+Y  ++  +C+      A   + K+      P+ V +NT 
Sbjct: 146 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTI 205

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I  +C    V  A  L  +M       ++ TYN L+ G   V ++KEA  L+ E+    I
Sbjct: 206 IDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTI 265

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N+ TYN ++  +C+ G V EA  +L  ML    K D IT++ ++  Y    +V  A  
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQH 325

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + + +   G   PD+ +YT L+ G C +  + EA    ++M  + + P   T++ L+  L
Sbjct: 326 VFNAMSLMG-VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384

Query: 562 FSNLGHLGPVYILDDIMANK 581
             + G +  V+ L D M ++
Sbjct: 385 CKS-GRISYVWDLIDEMRDR 403



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 117/226 (51%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   Q++   M + GV+     +  +IN + +  + ++AL +F  + +  + P +  Y+
Sbjct: 319 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S +  +   M+  G   +V TY+ L+  LCKN  +D A  L  +M ++
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
              P+  ++T ++  +CK G++++A+E     L   +   V  YN +ING CK+  +EEA
Sbjct: 439 EIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEA 498

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             +L +M D G  PN  T+ TII +L      + +  +L QM  RG
Sbjct: 499 LTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 119/240 (49%), Gaps = 5/240 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + ++++ Y  V   ++A  +F  +   G+ P V  Y  +++             ++  M 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           +  M P + TY+ L+  LCK+ R+   + L+ EM ++G   D ++Y++++  +CK G ++
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 153 EARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  L  +         +  +  L++GLCK  ++++A  +  +++ +G   NV TY+ +I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  C  G +E +L +L +M   GC PN  +F +++          +A  L  +MI  G L
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 35/165 (21%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I  V  L+ +M+  G       + S+I+   + G  ++A+ +F ++++  
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439

Query: 61  LKPTVKIYNHILDALLAENRFS-----------------------MIN------------ 85
           ++P +  +  +LD L    R                         MIN            
Sbjct: 440 IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEAL 499

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            + S M+ +G  PN FT+  ++ AL K +  D A KLL +M  +G
Sbjct: 500 TMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 288/588 (48%), Gaps = 53/588 (9%)

Query: 26  VSCSEGVFISVIN-----SYR---RVGLAE----QALKMFYRIREFGLKPTVKIYNHILD 73
           +SC   VF SV +     SYR   R G+ +     A+ +F  +     +P +  ++ +  
Sbjct: 21  LSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS 80

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            +    ++ ++  +   M+  G+  N++T +I++   C+  ++  A+  + ++   G  P
Sbjct: 81  VVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLL 188
           D V+++T+++ +C  G+V EA EL  R         +   NAL+NGLC   K+ +A  L+
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200

Query: 189 CEMVDRGIDPNVIT-----------------------------------YSTIISSLCDV 213
             MV+ G  PN +T                                   YS II  LC  
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G+++ +  +  +M ++G   +I  +T+L++G+   GR  + + L   MI+    P+VVA+
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S LI      G + EA  +  +M +    P+  TY++LIDGF K   L  A+ + + M+S
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            GC PN+  +  ++   C+ N+      L  KM+      +TVT+NT I+G C  G+++ 
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +L  +M      P+I +Y  LLDGL      ++A E+  +IEK  ++L+I  YN I+H
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C A  V +A+ L   + ++G K D  T+NI+I   CK+G ++ A  L  ++   G  +
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-S 559

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  +Y  L+      G   ++   ++++   G   + +T  ++V  L
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 270/533 (50%), Gaps = 7/533 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D V  L +QM+++G++ +      +IN   R      A     +I + G +P    ++
Sbjct: 87  QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E R S    +   M   G +P + T N L+  LC N +V  A  L+  M   
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  P+ V+Y  ++  +CK GQ   A EL  +            Y+ +I+GLCK+  ++ A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EM  +G   ++I Y+T+I   C  G  +    +L  M  R   P++ +F++L+  
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           ++  G+  EA +L   MI+ G  P+ V Y++LI G C    +D+A  +   M    C PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ LI+G+ KA  +    +++ +M   G   + V Y  +++  C+      A  L +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+ V++   + GLC  G  + A+++ +++++ +   +I  YN ++ G+   +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +V +A++L   +   G++ ++ TYN ++ G+C+ G + EA  L  KM  +G   +  T+N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           I+I A+  +G    + +L++ I+  G ++ D  S   ++  + + G ++++F+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCG-FSVD-ASTVKMVVDMLSDGRLKKSFL 617



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 172/360 (47%), Gaps = 5/360 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G      ++ ++I  +   G  +   K+   + +  
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D  + E +      ++  M + G+ P+  TY  L+   CK N++D A 
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +L  M +KGC P+  ++  +++  CK   +++  EL  +       +    YN LI G 
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+E A  L  EMV R + P++++Y  ++  LCD G  E +L I  ++       +I
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G  P+V  Y+ +I GLC  GS+ EA  +  +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE+   PN  TY+ LI      G+   ++++   +   G S +      +V +L    +
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 263/510 (51%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  N+   N LL+  C+  R D A 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY+ ++ S+C  G+  +A +L      G       V  YN +I
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  KE  + +A  L  EMV RGI P+++TY++++ +LC    ++ +   L QM  +   
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN  ++ +L+ GY   G+  EA  ++  M R   LP+VV  S L+  LC  G + EA  V
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P+V +Y+ +++G+A  G L+  + +++ M+ +G +P+   +  ++K    
Sbjct: 350 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 409

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      P+ VT+ T I  LC  G++D AM+  +QM      P+   
Sbjct: 410 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 469

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+ G      + +A EL++EI   G+ L+IV +++I++ +C+ G V++A  +    +
Sbjct: 470 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 529

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   DA+ +N+++  YC  GK+  A+++ D +   G   P+++ Y +L+ G C  G +
Sbjct: 530 NVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNVVGYGTLVNGYCKIGRI 588

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML  GI P+   +++++  LF
Sbjct: 589 DEGLSLFREMLQRGIKPSTILYSIIIDGLF 618



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/566 (25%), Positives = 263/566 (46%), Gaps = 44/566 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R    E AL  F ++   GL+  + I NH+L+      R    ++ +       G  P+V
Sbjct: 126 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 185

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEA---- 154
           F+Y+ILLK+LC   +   A  LL  M   G  C+P+ V+Y T++    K G V +A    
Sbjct: 186 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 245

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN-------------- 199
           +E+  R     +  YN++++ LCK   +++A   L +MV++ + PN              
Sbjct: 246 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 305

Query: 200 ---------------------VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
                                V+T S ++ SLC  G ++ +  +   M ++G NP++ S+
Sbjct: 306 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             +L GY   G   + +DL++ M+ +G  P+   ++ LI    + G +D+A+ +  +M +
Sbjct: 366 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 425

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+V TY  +I    + G +  A + +N+MI  G +P+  AY C+++  C +    +
Sbjct: 426 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 485

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  LI ++       + V F++ I  LC  GRV  A  + D        P+   YN L+D
Sbjct: 486 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMD 545

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G   V ++++A  +   +   GI+ N+V Y T+++G C+ G + E   L  +ML  G K 
Sbjct: 546 GYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKP 605

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             I ++III    + G+   A      +   G    DI +Y  +L G+  +    EA   
Sbjct: 606 STILYSIIIDGLFEAGRTVPAKMKFHEMTESG-IAMDICTYNIVLRGLFKNRCFDEAIFL 664

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSN 564
            +++    +  N  T N ++  +F  
Sbjct: 665 FKELRAMNVKINIITLNTMIDGMFQT 690



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 262/555 (47%), Gaps = 8/555 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P +  YN ++ A
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L               M    + PN +TYN L+       +   A ++  EM      PD
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 326

Query: 135 AVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+ + ++ S+CK G+++EAR+    +AM+     V  YN ++NG   +  + +   L  
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M+  GI P+  T++ +I +  + G ++ ++ I  +M   G  P++ ++ +++      G
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A + +N+MI +G  P+  AY+ LI G C++GS+ +A  +  ++  N    ++  +S
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 506

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+   K G ++ A  I++  ++ G  P+ V Y  ++   C      +A  + + M   
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN V + T + G C  GR+D  + L  +M Q    P+   Y+ ++DGL    R   A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                E+ + GI ++I TYN +L G+ +     EA  L  ++     K++ IT N +I  
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +V  A  L   I       P +++Y+ ++  +   G ++EA      M N G  P
Sbjct: 687 MFQTRRVEEAKDLFASI-SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 745

Query: 550 NFATWNVLVRSLFSN 564
           N    N +VR L   
Sbjct: 746 NSRLLNHVVRELLKK 760



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 241/467 (51%), Gaps = 5/467 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G  ++A  +F  +   G  P V  YN +L+    +     +  ++  M  DG+ P+ +
Sbjct: 339 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 398

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMR 160
           T+N+L+KA      +D A  +  EM + G  PD V+Y T+++++C++G++++A E     
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GV+     YN LI G C    + +A  L+ E+++ G+  +++ +S+II++LC +G V
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  I       G +P+   +  L+ GY L G+  +A  +++ M+  G  PNVV Y TL
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++G C  G +DE +S+  +M +    P+   YS +IDG  +AG  + A   ++ M  +G 
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + ++  Y  +++ L +N  F +A  L +++   N   N +T NT I G+    RV+ A  
Sbjct: 639 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 698

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L   + +   +P++ TY+ ++  L++   V+EA ++ + ++  G + N    N ++  + 
Sbjct: 699 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 758

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   +V A   L K+      L+ +T  +++  +  +G     I+ L
Sbjct: 759 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 805



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 198/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   NI     LL+G+    RT E
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +YS L+  LC  G   +A  +   M E    C PNV  Y+ 
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G++  A  ++  M+  G  P++V Y  +V  LC+     +A + + +M  + 
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+N  I G    G+   A+++  +M+++  LP++ T + L+  L +  ++KEA 
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   ++ +YN +L+G    G +V+   L   ML +G   D  TFN++I AY
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 407

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   PD+++Y +++  +C  G M +A     +M+++G+ P+
Sbjct: 408 ANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 466

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              +N L++   ++   L    ++ +IM N
Sbjct: 467 KYAYNCLIQGFCTHGSLLKAKELISEIMNN 496



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 5/327 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV+  +  +  +I  +   G   +A ++   I   G+   +  ++
Sbjct: 447 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 506

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G+ P+   YN+L+   C   +++ A ++   M + 
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  R       +Y+ +I+GL +  +   A
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  ++ TY+ ++  L      + ++ +  ++       NI +  +++ G
Sbjct: 627 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 686

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+  + R   +P+VV YS +I  L   G ++EA  +   M+   C PN
Sbjct: 687 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 746

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM 331
               + ++    K   ++ A    +++
Sbjct: 747 SRLLNHVVRELLKKNEIVRAGAYLSKI 773


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 280/549 (51%), Gaps = 21/549 (3%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP-TVKIYNHILDALLAENRFS 82
           + VSCS G  + V+  + R+   E   +         + P +V  Y  ++D      R  
Sbjct: 124 DSVSCSNGPAL-VLALFNRICREEAGPR---------VAPLSVHTYGILMDCCCRARRPD 173

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTI 141
           +    ++ + R G+       N  LK LC   R D A  +L+  M + GC P+A+SY T+
Sbjct: 174 LGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTV 233

Query: 142 VSSICKLGQVEEARELAMRFGS-------GVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           + S+C   + +EA ++  R           V  +N +I+G  K+ ++ +A  L+ EMV +
Sbjct: 234 IKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQK 293

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G++P+V+TY++I+ +LC    ++ +  +L QM  +G  P+  ++T+++ GY   G   E+
Sbjct: 294 GVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKES 353

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
           + ++ +M  +G +P +V +++ +  LC +G   +A  +   M      P++ +YS L+ G
Sbjct: 354 AKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHG 413

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +A  G     + +++ M   G   N   +  ++    +  M  +A  +  +M  +   P+
Sbjct: 414 YATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPD 473

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            VT++T I   C  GR+  AM+   QM      PN   Y+ L+ G      + +A ELV+
Sbjct: 474 VVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVS 533

Query: 435 EIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           E+   GI + NIV +++I+H +C  G V++A  +   ++  G +   +TFN +I  YC  
Sbjct: 534 EMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLV 593

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           GK+  A  +LD +   G   PD+++Y +L+ G C SG + +  I  ++ML++ + P   T
Sbjct: 594 GKMEKAFGVLDAMVSVG-IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 652

Query: 554 WNVLVRSLF 562
           +++++  LF
Sbjct: 653 YSIVLDGLF 661



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 264/554 (47%), Gaps = 9/554 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           ++Q+M  EG  CS  V  F +VI+ + + G   +A  +   + + G++P V  YN I+DA
Sbjct: 249 MVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDA 308

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           +   M   G+EP+  TY  ++     +     + K+  +M +KG  P 
Sbjct: 309 LCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPG 368

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLC 189
            V++ + +SS+CK G+ ++A E+     +      +  Y+ L++G   E +  +   L  
Sbjct: 369 IVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFH 428

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M D+GI  N   ++ +IS+    G ++ ++ +  +M  +G  P++ ++++L+  +   G
Sbjct: 429 SMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMG 488

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTY 308
           R  +A + +++MI  G  PN V Y +LIHG C +G + +A  +  +M     P PN+  +
Sbjct: 489 RLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFF 548

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S++I      G ++ A  ++N +I  G  P +V +  ++   C      +A  +++ M  
Sbjct: 549 SSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 608

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+ VT+NT + G C  G++D  + L  +M   +  P   TY+ +LDGL    R   
Sbjct: 609 VGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSA 668

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A ++  E+   G  ++I TY  +L G+CR  +  EA  L  K+     K D    N +I 
Sbjct: 669 AKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVIN 728

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A  K  +   A  L   I   G   P++ +Y  ++  +   G ++EA      M   G  
Sbjct: 729 ALYKVRRREEANDLFAAISTSG-LVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCA 787

Query: 549 PNFATWNVLVRSLF 562
           P+    N ++R L 
Sbjct: 788 PSSRLLNDIIRMLL 801



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 273/546 (50%), Gaps = 45/546 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D  + +L+QM  +GV      + ++I+ Y   G  +++ KMF ++   G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364

Query: 61  LKPTVKIYNHILDAL-----------------------------------LAENRFSMIN 85
           L P +  +N  + +L                                     E RF+ +N
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            ++ +M   G+  N   +NIL+ A  K   +D A  +  EM  +G  PD V+Y+T++S+ 
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484

Query: 146 CKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID-PN 199
           C++G++ +A E     +++       VY++LI+G C    + +A  L+ EM+ +GI  PN
Sbjct: 485 CRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPN 544

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           ++ +S+II SLC+ G V  +  +   +   G  P I +F SL+ GY L G+  +A  + +
Sbjct: 545 IVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 604

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M+  G  P+VV Y+TL+ G C +G +D+ + +  +M      P   TYS ++DG   AG
Sbjct: 605 AMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAG 664

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A ++++ MI +G + ++  Y  ++K LC+N++  +A +L  K+   +C  +    N
Sbjct: 665 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 724

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I  L    R + A  L   +     +PN++TY  ++  LL+   V+EA  + + +EK 
Sbjct: 725 TVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS 784

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT--KLDAITFNIIIYAYCKQGKVN 497
           G   +    N I+  + + G +V+A   + K  ++GT   L+A T ++++  +  +GK  
Sbjct: 785 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSK--VDGTIISLEASTTSLLMSLFSSKGKHR 842

Query: 498 NAIQLL 503
             I+ L
Sbjct: 843 EQIKFL 848


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 286/578 (49%), Gaps = 13/578 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D    L+ +M   G S    ++   I    + G  E+A  +F  +  FG+ P  + Y  +
Sbjct: 332 DAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASL 391

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++    E        +   +K+  +  + +TY   +K +C +  +DGAY ++ EMG  GC
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451

Query: 132 APDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            P+ V YTT++ +  +  +  +A R L      G++     YN+LI GL K  K++EA  
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L EMV+ G  P+  TY   IS   + G   ++   + +M   G  PN    T L+  Y 
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+  EA   +  M+ +G L +   Y+ L++GL  NG +++A  + ++M      P+V 
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y  LIDGF+K GN+  AS I++ M+  G + NV+ Y  ++   C++    +A  L+++M
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           + +  PPN VT+ T I G C  G +  A +L D+MK    +P+   Y  L+DG  R+N V
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 751

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-----KLDAI 481
           + A  +    EK G   +   +N +++ V + G       ++ + L++G+     K + +
Sbjct: 752 ERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINR-LMDGSFDKFGKPNDV 809

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I   CK+G +  A +L   ++      P +I+YTSLL G    G   E F    +
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKAN-LMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           ++  GI P+   ++V++ +          + +LD + A
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFA 906



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 260/521 (49%), Gaps = 7/521 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++AL++   +   GL P+ + YN ++D L  + R      +   M   G+  +   Y+IL
Sbjct: 262 DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSIL 321

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG- 162
           +  L K    D A  L+ EM + G + D + Y   +  + K G +E+A+ L    + FG 
Sbjct: 322 IDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGV 381

Query: 163 -SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             G   Y +LI G  +E  + + + LL E+  R I  +  TY T +  +C  G+++ +  
Sbjct: 382 TPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYN 441

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I+ +M   GC PN+  +T+L+K +L   R  +A  +   M  +G  P+   Y++LI GL 
Sbjct: 442 IVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLS 501

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               MDEA S   +M EN   P+  TY A I G+ +AG    A +    M+  G  PN V
Sbjct: 502 KAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKV 561

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             T ++   C+     +A S    M  +    +  T+   + GL   G+V+ A ++  +M
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +     P++ +Y  L+DG  ++  +++A  +  E+ + G+  N++ YN +L G CR+G +
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A +LL +M  +G   +A+T+  II  YCK G +  A QL D ++  G   PD   YT+
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG-LVPDSFVYTT 740

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           L+ G C    ++ A I + +   +G   + A +N L+  +F
Sbjct: 741 LVDGCCRLNDVERA-ITIFETNEKGCASSSAPFNALINWVF 780



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 247/538 (45%), Gaps = 48/538 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL ++K   +  S   + + +      G  + A  +   +   G +P V IY  ++   L
Sbjct: 407 LLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFL 466

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            ++RF     +   M+  G+ P+ F YN L+  L K  ++D A   L+EM   G  PDA 
Sbjct: 467 QKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAF 526

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEM 191
           +Y   +S   + G+   A +          + N      LIN  CK+ K+ EA      M
Sbjct: 527 TYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSM 586

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V++GI  +  TY+ +++ L   G V  +  I  +M  +G  P++ S+ +L+ G+   G  
Sbjct: 587 VEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNM 646

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +AS +++ M++ G   NV+ Y+ L+ G C +G +++A  +  +M     PPN  TY  +
Sbjct: 647 QKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTI 706

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK----MA 367
           IDG+ K+G+L  A Q+++ M   G  P+   YT +V   C+ N   +A ++ E      A
Sbjct: 707 IDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCA 766

Query: 368 FENCP----------------------------------PNTVTFNTFIKGLCGCGRVDW 393
             + P                                  PN VT+N  I  LC  G ++ 
Sbjct: 767 SSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEA 826

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +L   M++   +P + TY  LL+G  ++ R  E F +  E+   GI+ + + Y+ I++
Sbjct: 827 AKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIIN 886

Query: 454 GVCRAGMVVEAFQLLGKMLI-----EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
              + GM  +A  LL +M       +G KL   T   ++  + K G++  A ++++ +
Sbjct: 887 AFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENM 944



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 193/410 (47%), Gaps = 40/410 (9%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            + M  +G+      +  ++N   + G    A ++F+ +R  G+ P V  Y  ++D    
Sbjct: 583 FRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSK 642

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                  + I+  M + G+  NV  YN+LL   C++  ++ A +LL EM  KG  P+AV+
Sbjct: 643 LGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVT 702

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           Y TI+   CK G                               + EAF L  EM  +G+ 
Sbjct: 703 YCTIIDGYCKSGD------------------------------LAEAFQLFDEMKLKGLV 732

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+   Y+T++   C + +VE ++ I  +   +GC  +   F +L+      G+T   +D+
Sbjct: 733 PDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDM 791

Query: 258 WNRMIREGF----LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
            NR++   F     PN V Y+ +I  LC  G+++ A  + + M++ +  P V TY++L++
Sbjct: 792 INRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLN 851

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--- 370
           G+ K G       +++ +I+ G  P+ + Y+ ++    +  M  +A  L+++M  +N   
Sbjct: 852 GYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVD 911

Query: 371 --CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
             C  +  T    + G    G ++ A K+++ M + + +P+ +T  EL++
Sbjct: 912 DGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELIN 961



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 193/418 (46%), Gaps = 24/418 (5%)

Query: 169 NALINGLCKEHKIEEAFWLLCE-MVDRGIDPNVITYSTIISSLCDVGNVETSLGIL---- 223
           N L++ L K ++++  FW + + MV+R +  +V +Y  +I + C  GNV+ +  +L    
Sbjct: 193 NHLLDALLKRNRLD-LFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTE 251

Query: 224 -----------------GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
                              M  +G  P+  S+  L+ G     R  +A  L   M   G 
Sbjct: 252 EELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGL 311

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             + VAYS LI GL    + D A  + ++M  +    +   Y   I   +K G +  A  
Sbjct: 312 FADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKA 371

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +++ MI+ G +P   AY  +++   +     + + L+ ++   N   +  T+ T +KG+C
Sbjct: 372 LFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMC 431

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G +D A  ++ +M    C PN+  Y  L+   L+ +R  +A  ++ E+ + GI  +  
Sbjct: 432 SSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTF 491

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            YN+++ G+ +A  + EA   L +M+  G K DA T+   I  Y + G+  +A + +  +
Sbjct: 492 CYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM 551

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              G   P+ +  T L+   C  G + EA    + M+ +GI  +  T+ VL+  L  N
Sbjct: 552 LECGVI-PNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKN 608



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 13/336 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +  +M+ +G++     + ++I+ + ++G  ++A  +F  + + GL   V IYN
Sbjct: 610 KVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYN 669

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L              +   M   G  PN  TY  ++   CK+  +  A++L  EM  K
Sbjct: 670 MLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
           G  PD+  YTT+V   C+L  VE A  +         S  + +NALIN + K  K E   
Sbjct: 730 GLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTT 789

Query: 186 WLLCEMVDRGID----PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            ++  ++D   D    PN +TY+ +I  LC  GN+E +  +   M      P + ++TSL
Sbjct: 790 DMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSL 849

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM----- 296
           L GY   GR  E   +++ +I  G  P+ + YS +I+     G   +A+ +  QM     
Sbjct: 850 LNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNA 909

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            ++ C  +++T  AL+ GFAK G +  A ++   M+
Sbjct: 910 VDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMV 945



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/335 (22%), Positives = 136/335 (40%), Gaps = 58/335 (17%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +M   G++ +  ++  ++  + R G  E+A ++   +   G  P    Y  I+D   
Sbjct: 652 IFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYC 711

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA---- 132
                +    ++  MK  G+ P+ F Y  L+   C+ N V+ A  +  E   KGCA    
Sbjct: 712 KSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSA 770

Query: 133 -----------------------------------PDAVSYTTIVSSICKLGQVEEAREL 157
                                              P+ V+Y  ++  +CK G +E A+EL
Sbjct: 771 PFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKEL 830

Query: 158 AMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                       V  Y +L+NG  K  +  E F +  E++  GI+P+ I YS II++   
Sbjct: 831 FHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLK 890

Query: 213 VGNVETSLGILGQMFVR-----GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            G    +L +L QMF +     GC  +I +  +LL G+   G    A  +   M+R  ++
Sbjct: 891 EGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYI 950

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           P+      LI+  C        +S + +M  ++ P
Sbjct: 951 PDSSTVIELINESC--------ISSNQRMAADAAP 977



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/383 (19%), Positives = 148/383 (38%), Gaps = 77/383 (20%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCP--------------------PNVTTYSAL 311
           ++S L   LC+ GS+++A SV  +M E   P                      V  +  L
Sbjct: 99  SFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGIL 158

Query: 312 IDGFAKAGNLLGASQIWN--RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           IDG+ + G L  A  +++  + +     P++     ++  L + N       + + M   
Sbjct: 159 IDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVER 218

Query: 370 NCPPNTVTFNTFIKGLCGCG---------------------RVDWAMKLLDQMKQYECLP 408
           N   +  ++   I   C  G                      VD A++L   M     +P
Sbjct: 219 NVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVP 278

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +  +YN L+DGL +  R+++A  L+ E+   G+  + V Y+ ++ G+ +      A  L+
Sbjct: 279 SRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLV 338

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD------------------------ 504
            +M+  G  +D + ++  I    K+G +  A  L D                        
Sbjct: 339 HEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFRE 398

Query: 505 -RIRGGGEWNPDI---------ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
             +R G E   +I          +Y + + G+C+SG +  A+  +++M   G  PN   +
Sbjct: 399 KNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIY 458

Query: 555 NVLVRSLFSNLGHLGPVYILDDI 577
             L+++          V +L ++
Sbjct: 459 TTLIKTFLQKSRFGDAVRVLKEM 481


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/626 (26%), Positives = 292/626 (46%), Gaps = 86/626 (13%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREF-GLKPTVKIYNHILDALLAENRFSMINPI 87
           SE   + V++++ R  + + AL  F  +    G  P V+ +N +LDA +   R+S  +  
Sbjct: 82  SESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAF 141

Query: 88  YSNMKRDG----MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           ++++        + PN+ TYNI+L++LC    VD A  L   +  +G APD V+Y+T++S
Sbjct: 142 FASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMS 201

Query: 144 SICKLGQVEEAREL-------------------------------AMRF----------G 162
            + K  Q++ A +L                               AM+            
Sbjct: 202 GLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGAS 261

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             ++ Y  +++GLCK  + +EA  +   M+      + +TY  +I  LC  G+V+++  +
Sbjct: 262 PNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARV 321

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR-------------MIREGFL-- 267
              M   G   ++  + SL+KG+   GRT EA   W+              ++ +G L  
Sbjct: 322 YSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDS 381

Query: 268 --------------------PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                               P+ V + TLIHGLC NG  + A  +      +    +V +
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFS 441

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           YS++I+ F K G    A++++  M+ +GC PN   Y  ++   C+ +  + A  +  +M 
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
              C P  +T+NT I GLC   +   A  L  +M +    P+I TY  L+ GL R  +V 
Sbjct: 502 SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A  +  EI   G+Q++++ +N ++HG+C AG V EAF +  +M  +    + +T+N ++
Sbjct: 562 VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLM 621

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             + + G ++ A  L   I   G   PDI++Y + + G+C+     E  + L ++L  GI
Sbjct: 622 DGFYEIGSIDKAASLWTAILDNG-LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGI 680

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYI 573
            P   TW++LVR++       GP+ I
Sbjct: 681 MPTVITWSILVRAVIK----YGPIQI 702



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 256/503 (50%), Gaps = 6/503 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREF 59
           ++  L +  ++D    LL +M   GV      + ++++   R G+ E+A+K++ + +R+ 
Sbjct: 199 LMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDP 258

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P +  Y  +LD L    RF     ++S M  +  + +  TY IL+  LC++  VD A
Sbjct: 259 GASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSA 318

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGV---SVYNALINGL 175
            ++  +M   G   D   Y +++   C++G+  EA +     G SG+   + YN +  GL
Sbjct: 319 ARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGL 378

Query: 176 CKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
                + EA  LL ++  D    P+ +T+ T+I  LC+ G    +  IL      G   +
Sbjct: 379 LDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELD 438

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + S++S++  +   GRTH+A++++  M+++G  PN   Y+ LI+G C    +++A+ +  
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M  N C P + TY+ LIDG  KA     AS +   M+  G  P++  Y  +++ LC++ 
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A  + +++       + +  N  I GLC  G+VD A  +  +MK+  C PN+ TYN
Sbjct: 559 KVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYN 618

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG   +  + +A  L T I   G++ +IVTYNT + G+C      E   LL ++L  
Sbjct: 619 TLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLAT 678

Query: 475 GTKLDAITFNIIIYAYCKQGKVN 497
           G     IT++I++ A  K G + 
Sbjct: 679 GIMPTVITWSILVRAVIKYGPIQ 701


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/548 (30%), Positives = 285/548 (52%), Gaps = 12/548 (2%)

Query: 25  GVSCSEGVFISV------INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           G+ C     +SV      I  + +  + E+ L +FY++   GL P V+  N +L  L  +
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK 185

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +  + +  +YS M +  + P + T+N ++ + CK   V  A ++L  M   GC P+ VSY
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245

Query: 139 TTIVSSICKLGQVEEARELAMR---FGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVD 193
             +V+ +   G+ + A+EL  +    G  VS   YN LI G CK+   EEA  L  EM+ 
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           RG  P V+TY+TI+ SLC +G V  +   L  M      P++ S+ +L+ GY   G   E
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L++ +  +  +P+VV Y+TLI G C  G++D A  +   M ++   P+V T++ L+ 
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF + GNL  A ++++ M+S G  P+ +AYT  +    +     +A  + E+M  E  PP
Sbjct: 426 GFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPP 485

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + +T+N  I GLC  G  D A +L+ +M+    +P+  TY  ++   L    +++A E+ 
Sbjct: 486 DLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVF 545

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           +++ K GI  ++VTY  ++H     G +  A +   +M  +G   + IT+N +IY  CK+
Sbjct: 546 SDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             ++ A  L   +   G  +P+  +YT L+    N    Q+A    + ML+  I P+  T
Sbjct: 606 NMMDVAYNLFAEMESKG-VSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664

Query: 554 WNVLVRSL 561
            + L++ L
Sbjct: 665 HSALMKHL 672



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 235/475 (49%), Gaps = 5/475 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++++S  + G   +A+++   +R FG  P    YN +++ L  +  F     +   M 
Sbjct: 210 FNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMS 269

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G++ +  TYN L++  CK    + A  L  EM  +G  P  V+Y TI+ S+C+LG+V 
Sbjct: 270 MLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVS 329

Query: 153 EARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +AR      +       +  YN LI G  +     EA  L  E+  + + P+V+TY+T+I
Sbjct: 330 DARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLI 389

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C  GN++ + G+   M   G  P++ +FT L++G+   G    A +L++ M+  G  
Sbjct: 390 DGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLK 449

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+ +AY+T I G    G+  +A  +  +M+    PP++ TY+ LI+G  K GN   A+++
Sbjct: 450 PDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANEL 509

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
             +M   G  P+ V YT ++     + +  +A  +   M  +   P+ VT+   I     
Sbjct: 510 VQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAV 569

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GR+D+A K  D+M+     PN+ TYN L+ GL + N +  A+ L  E+E  G+  N  T
Sbjct: 570 RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYT 629

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           Y  +++         +A +L   ML    K D+ T + ++    K  K+   ++L
Sbjct: 630 YTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/551 (24%), Positives = 258/551 (46%), Gaps = 19/551 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   ++ E+     +L  M++ G   ++  +  ++N     G  ++A ++  ++   G
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG 272

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LK +   YN ++     +  F   N +   M   G  P V TYN ++ +LC+  RV  A 
Sbjct: 273 LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDAR 332

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           + L  M N+   PD VSY T++    +LG   EA  L     S      V  YN LI+G 
Sbjct: 333 RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGG 392

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   ++ A  +  +M+  G+ P+V+T++ ++   C +GN+  +  +  +M  RG  P+ 
Sbjct: 393 CRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+ + G L  G   +A  +   M  EGF P+++ Y+ LI+GLC  G+ D+A  +  +
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQK 512

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+  TY+++I     +G L  A ++++ M+  G  P+VV YT ++        
Sbjct: 513 MRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGR 572

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A    ++M  +   PN +T+N  I GLC    +D A  L  +M+     PN  TY  
Sbjct: 573 LDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTI 632

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++    +   ++A +L  ++    I+ +  T++ ++  + +       ++LL  + +E 
Sbjct: 633 LINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK------DYKLLAVLRLEN 686

Query: 476 TKLDAITFNIII----YAYCKQGKVNNAIQLLDRIRGGGEWNP---DIISYTSLLWG-IC 527
             L  +  N       +   ++ K N+  + +     GG   P    + + + +L   IC
Sbjct: 687 LPLAIVEINSTWIAEGFVKLEESKNNSHFRAIHVFEKGGFLEPFLGKLCAKSRVLKALIC 746

Query: 528 NSGGMQEAFIY 538
            +  ++E  ++
Sbjct: 747 KAMDLRETLVH 757


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 167/627 (26%), Positives = 289/627 (46%), Gaps = 87/627 (13%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYNHILDALLAENRFSMINPI 87
           SE   + V++++ R  + + AL  F  +    G  P ++ +N +LDA +   RFS  +  
Sbjct: 82  SESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAF 141

Query: 88  YSNMKRDG----MEPNVFTYNILLKALC-------------------------------- 111
           ++++        + PN+ TYNI+L++LC                                
Sbjct: 142 FASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMC 201

Query: 112 ---KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------G 162
              K +R+D A  LL EM   G  PD V Y  ++    K G+ E+   +  +        
Sbjct: 202 GLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR 261

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             ++ YN +++GLCK  + +E   +   MV   + P+VITY  +I  LC  G+V+ +  +
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW--------------NRMIREGF-- 266
             ++   G   +   + SL+KG+   GR  EA   W              N MI+  F  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 267 -------------------LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                              +P+ V + TLIHGLC NG  ++A ++  +   +    +V +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           YS++I+G    G L+ A +++ +M  +GC PN   Y  ++   CQ      A  +  KMA
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
              C P  +T+NT I GLC   +   A  +  +M +    P+ITTY  L+ GL    ++ 
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLDAITFNII 486
           +A  +  +I   G++++++ +N ++HG+C AG V EA  +   M   +    + +T+N +
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +    + G ++ A  L   I   G   PDIISY + + G+C+   + E    L ++L+ G
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDG-LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYI 573
           I P   TWN+LVR++       GP+ +
Sbjct: 681 IIPTVITWNILVRAVIK----YGPIQV 703



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 258/501 (51%), Gaps = 9/501 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFGLKP 63
           L ++  +D    LL +M   GV      + +++    + G  E+ ++++ + +++ G +P
Sbjct: 203 LAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARP 262

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            +  YN +LD L    RF  +  ++  M  + ++P+V TY IL+  LC++  VDGA ++ 
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG----SGVSVYNALINGLCKEH 179
            E+   G   DA  Y ++V   C+ G+V+EA +     G      +  YN +I GL    
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSG 382

Query: 180 KIEEA--FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            ++EA   W L E  D    P+ +T+ T+I  LC  G    +  I  +  V G   ++ S
Sbjct: 383 MVDEAIELWDLLEK-DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           ++S++ G    GR  +A  ++ +M ++G  PN   Y+ LI G C      +AV +  +M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +N C P V TY+ LIDG  KA     AS +   M+ NG +P++  Y  +++ L  +    
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNEL 416
            A S+ +++ ++    + +  N  I GLC  G+VD A+ +   MK+ + C PN+ TYN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL     + +A  L T I + G++ +I++YNT + G+C    + E  QLL ++L  G 
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 477 KLDAITFNIIIYAYCKQGKVN 497
               IT+NI++ A  K G + 
Sbjct: 682 IPTVITWNILVRAVIKYGPIQ 702


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 263/510 (51%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  N+   N LLK  C+  R D A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY+ ++ S+C  G+  +A +L      G       V  Y+ +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  KE  + +A  L  EMV RGI P+ +TYS+++ +LC    ++ +   L QM  +G  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN  ++ +L+ GY   G+  EA  ++  M R   LP+VV  S L+  LC  G + EA  V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      PNV +Y+ +++G+A  G L+  + +++ M+ +G +P++  +  ++K    
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      P+ VT+ T I  LC  G++D AM+  +QM      P+   
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+ G      + +A EL++EI   G+ L+IV +++I++ +C+ G V++A  +    +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G    A+ +++++  YC  GK+  A+++ D +   G   P+ + Y +L+ G C  G +
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNDVVYGTLVNGYCKIGRI 585

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML +GI P+   +N+++  LF
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLF 615



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/567 (26%), Positives = 265/567 (46%), Gaps = 46/567 (8%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R    E AL  F ++   GL+  + I NH+L       R    ++ +       G  P+V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEA---- 154
           F+Y+ILLK+LC   +   A  LL  M   G  C+PD V+Y+T++    K G V +A    
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLF 242

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN-------------- 199
           +E+  R        Y+++++ LCK   +++A   L +MV++G+ PN              
Sbjct: 243 KEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST 302

Query: 200 ---------------------VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
                                V+T S ++ SLC  G ++ +  +   M ++G NPN+ S+
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T +L GY   G   + +DL++ M+ +G  P++  ++ LI    + G +D+A+ +  +M +
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+V TY  +I    + G +  A + +N+MI  G +P+  AY C+++  C +    +
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  LI ++       + V F++ I  LC  GRV  A  + D        P    Y+ L+D
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G   V ++++A  +   +   GI+ N V Y T+++G C+ G + E   L  +ML +G K 
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 479 DAITFNIIIYAYCKQGK-VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
             I +NIII    + G+ V   ++  +    G   N    +Y  +L G+  +    EA  
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK--CTYNIVLRGLFKNRCFDEAIF 660

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
             +++    +  N  T N ++  +F  
Sbjct: 661 LFKELRAMNVKINIITLNTMIAGMFQT 687



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 261/555 (47%), Gaps = 8/555 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P    Y+ ++ A
Sbjct: 204 LLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L               M   G+ PN +TYN L+       +   A ++  EM      PD
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 135 AVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+ + ++ S+CK G+++EAR+    +AM+     V  Y  ++NG   +  + +   L  
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M+  GI P++ T++ +I +  + G ++ ++ I  +M   G  P++ ++ +++      G
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A + +N+MI +G  P+  AY  LI G C++GS+ +A  +  ++  N    ++  +S
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+   K G ++ A  I++  ++ G  P  V Y+ ++   C      +A  + + M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN V + T + G C  GR+D  + L  +M Q    P+   YN ++DGL    R   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                E+ + GI +N  TYN +L G+ +     EA  L  ++     K++ IT N +I  
Sbjct: 624 KVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAG 683

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +V  A  L   I   G   P +++Y+ ++  +   G ++EA      M N G  P
Sbjct: 684 MFQTRRVEEAKDLFASISRSG-LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742

Query: 550 NFATWNVLVRSLFSN 564
           +    N +VR L   
Sbjct: 743 DSRLLNHVVRELLKK 757



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/533 (24%), Positives = 261/533 (48%), Gaps = 40/533 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  +  L+QM  +GV  +   + ++I  Y   G  ++A+++F  +R   + P V   + 
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329

Query: 71  ILDALL-------AENRFSMI-----NP-----------------------IYSNMKRDG 95
           ++ +L        A + F  +     NP                       ++  M  DG
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+++T+N+L+KA      +D A  +  EM + G  PD V+Y T+++++C++G++++A 
Sbjct: 390 IAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAM 449

Query: 156 E-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E        GV+     Y+ LI G C    + +A  L+ E+++ G+  +++ +S+II++L
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNL 509

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C +G V  +  I       G +P    ++ L+ GY L G+  +A  +++ M+  G  PN 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y TL++G C  G +DE +S+  +M +    P+   Y+ +IDG  +AG  + A   ++ 
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  +G + N   Y  +++ L +N  F +A  L +++   N   N +T NT I G+    R
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRR 689

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V+ A  L   + +   +P + TY+ ++  L++   V+EA ++ + ++  G + +    N 
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  + +   +V A   L K+      L+ +T  +++  +  +G     I+ L
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 197/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   NI     LLKG+    RT E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +YS L+  LC  G   +A  +   M E    C P+V  YS 
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYST 224

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G++  A  ++  M+  G  P+ V Y+ +V  LC+     +A + + +M  + 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+N  I G    G+   A+++  +M+++  LP++ T + L+  L +  ++KEA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   N+ +Y  +L+G    G +V+   L   ML +G   D  TFN++I AY
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAY 404

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   PD+++Y +++  +C  G M +A     +M+++G+ P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              ++ L++   ++   L    ++ +IM N
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNN 493



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 145/327 (44%), Gaps = 5/327 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV+  +  +  +I  +   G   +A ++   I   G+   +  ++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G+ P    Y++L+   C   +++ A ++   M + 
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  +       +YN +I+GL +  +   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  N  TY+ ++  L      + ++ +  ++       NI +  +++ G
Sbjct: 624 KVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAG 683

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+  + R G +P VV YS +I  L   G ++EA  +   M+   C P+
Sbjct: 684 MFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM 331
               + ++    K   ++ A    +++
Sbjct: 744 SRLLNHVVRELLKKNEIVRAGAYLSKI 770


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 162/607 (26%), Positives = 294/607 (48%), Gaps = 55/607 (9%)

Query: 26  VSCSEGVFISVIN-----SYR---RVGLAE----QALKMFYRIREFGLKPTVKIYNHILD 73
           +SC   VF SV +     SYR   R G+ +     A+ +F  +     +P +  ++ +  
Sbjct: 21  LSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFS 80

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            +    ++ ++  +   M+  G+  N++T +I++   C+  ++  A+  + ++   G  P
Sbjct: 81  VVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEP 140

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLL 188
           D V+++T+++ +C  G+V EA EL  R         +   NAL+NGLC   K+ +A  L+
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200

Query: 189 CEMVDRGIDPNVIT-----------------------------------YSTIISSLCDV 213
             MV+ G  PN +T                                   YS II  LC  
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD 260

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G+++ +  +  +M ++G   +I  +T+L++G+   GR  + + L   MI+    P+VVA+
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S LI      G + EA  +  +M +    P+  TY++LIDGF K   L  A+ + + M+S
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            GC PN+  +  ++   C+ N+      L  KM+      +TVT+NT I+G C  G+++ 
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +L  +M      P+I +Y  LLDGL      ++A E+  +IEK  ++L+I  YN I+H
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C A  V +A+ L   + ++G K D  T+NI+I   CK+G ++ A  L  ++   G  +
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-S 559

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL--GHLGPV 571
           P+  +Y  L+      G   ++   ++++   G   + +T    + +L   L  GH   V
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDV 619

Query: 572 YILDDIM 578
           +    ++
Sbjct: 620 FTFTTLL 626



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/582 (25%), Positives = 282/582 (48%), Gaps = 28/582 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D V  L +QM+++G++ +      +IN   R      A     +I + G +P    ++
Sbjct: 87  QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E R S    +   M   G +P + T N L+  LC N +V  A  L+  M   
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  P+ V+Y  ++  +CK GQ   A EL  +            Y+ +I+GLCK+  ++ A
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EM  +G   ++I Y+T+I   C  G  +    +L  M  R   P++ +F++L+  
Sbjct: 267 FNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           ++  G+  EA +L   MI+ G  P+ V Y++LI G C    +D+A  +   M    C PN
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ LI+G+ KA  +    +++ +M   G   + V Y  +++  C+      A  L +
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+ V++   + GLC  G  + A+++ +++++ +   +I  YN ++ G+   +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +V +A++L   +   G++ ++ TYN ++ G+C+ G + EA  L  KM  +G   +  T+N
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGG---------------------EWNPDIISYTSLL 523
           I+I A+  +G    + +L++ I+  G                        PD+ ++T+LL
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLL 626

Query: 524 WGIC--NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              C   +  + +A    + M   G  PN  T+N +++ L +
Sbjct: 627 RPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLN 668



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/572 (25%), Positives = 271/572 (47%), Gaps = 30/572 (5%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F ++IN     G   +AL++  R+ E G KPT+   N +++ L    + S    +   M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G +PN  TY  +LK +CK+ +   A +LL +M  +    DAV Y+ I+  +CK G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 152 EEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A     E+ ++ F + + +Y  LI G C   + ++   LL +M+ R I P+V+ +S +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      G +  +  +  +M  RG +P+  ++TSL+ G+    +  +A+ + + M+ +G 
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN+  ++ LI+G C    +D+ + +  +M       +  TY+ LI GF + G L  A +
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M+S    P++V+Y  ++  LC N    +A  + EK+       +   +N  I G+C
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +VD A  L   +      P++ TYN ++ GL +   + EA  L  ++E+ G   N  
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563

Query: 447 TYNTILHG----------------VCRAGMVVEAFQL------LGKMLIEGTKLDAITFN 484
           TYN ++                  + R G  V+A  L      L +ML  G + D  TF 
Sbjct: 564 TYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFT 623

Query: 485 IIIYAYC--KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
            ++  +C  +   V +A  L   ++  G + P++++Y +++ G+ N   + +    L +M
Sbjct: 624 TLLRPFCLEENASVYDAPTLFKNMKAMG-YKPNVVTYNTVIKGLLNGNMISQVPGVLDQM 682

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
              G  PN  T +  +  L     H   + +L
Sbjct: 683 FERGCQPNAVTKSTFISGLCKQDLHGSAILLL 714



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 258/541 (47%), Gaps = 36/541 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G   +E  +  V+    + G    A+++  ++ E  +K     Y+ I+D L 
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        +++ M+  G + ++  Y  L++  C   R D   KLL +M  +   PD V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +++ ++    K G++ EA EL       G+S     Y +LI+G CKE+++++A  +L  M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G  PN+ T++ +I+  C    ++  L +  +M +RG   +  ++ +L++G+   G+ 
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+  M+     P++V+Y  L+ GLC NG  ++A+ +  ++E++    ++  Y+ +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G   A  +  A  ++  +   G  P+V  Y  M+  LC+     +A  L  KM  +  
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ------------------------YECL 407
            PN  T+N  I+   G G    + KL++++K+                        +E  
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHE-- 616

Query: 408 PNITTYNELLDGL-LRVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           P++ T+  LL    L  N  V +A  L   ++  G + N+VTYNT++ G+    M+ +  
Sbjct: 617 PDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVP 676

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +L +M   G + +A+T +  I   CKQ    +AI LL ++      N D+ +   +L  
Sbjct: 677 GVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEND---NEDVTTKKKILIH 733

Query: 526 I 526
           I
Sbjct: 734 I 734



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 218/466 (46%), Gaps = 29/466 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L  +M+++G      ++ ++I  +   G  +   K+   + +  
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++D  + E +      ++  M + G+ P+  TY  L+   CK N++D A 
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            +L  M +KGC P+  ++  +++  CK   +++  EL  +       +    YN LI G 
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+E A  L  EMV R + P++++Y  ++  LCD G  E +L I  ++       +I
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++ G     +  +A DL+  +  +G  P+V  Y+ +I GLC  GS+ EA  +  +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552

Query: 296 MEENSCPPNVTTYSALID---------------------GFA-KAGNLLGASQIWNRMIS 333
           MEE+   PN  TY+ LI                      GF+  A  L  A     RM+ 
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLK 612

Query: 334 NGCSPNVVAYTCMVKVLC--QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            G  P+V  +T +++  C  +N   + A +L + M      PN VT+NT IKGL     +
Sbjct: 613 AGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMI 672

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
                +LDQM +  C PN  T +  + GL + +    A  L+ ++E
Sbjct: 673 SQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKME 718



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 22/330 (6%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           DG++ L ++M + GV      + ++I  +  +G  E A ++F  +    ++P +  Y  +
Sbjct: 405 DGLE-LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKIL 463

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           LD L           I+  +++  ME ++  YNI++  +C  ++VD A+ L   +  KG 
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFW 186
            PD  +Y  ++  +CK G + EA  L  +    G S     YN LI     E    ++  
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK 583

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L+ E+   G                D   +  +L  L +M   G  P++ +FT+LL+ + 
Sbjct: 584 LIEEIKRCGFS-------------VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFC 630

Query: 247 L--GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           L      ++A  L+  M   G+ PNVV Y+T+I GL +   + +   V  QM E  C PN
Sbjct: 631 LEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPN 690

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISN 334
             T S  I G  K  +L G++ +  R + N
Sbjct: 691 AVTKSTFISGLCKQ-DLHGSAILLLRKMEN 719


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/525 (31%), Positives = 260/525 (49%), Gaps = 9/525 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L  F+ +   G+ P VK  N +L  L    R+  I  +++ M + G+EP++ TYN LL +
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 110 LCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV 165
             K  R D    LL EM  +G  C P+ V++  +++ + + G +EEA E+   MR     
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 166 S--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           S   YN LI GL  +  +++A  L  EM + GI P V+TY+ +I  L   G VE +    
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P++ ++ SLL GY   G   EA  L+  +   G  P V+ Y+ LI G C  
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++EA  +  +M E  C P+V TY+ L+ G   A +L  A + ++ M+S G  P+  AY
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAY 486

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              ++         +A  L E M  E    +TVT+N  I GLC  G ++ A  L  +M  
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY  L+        ++EA +   ++   G+  + VTY   +H  CR G +  
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A+    KML EG + + IT+N++I+A C+ G+   A +    +   G   P+  +YT L+
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG-LVPNKYTYTLLI 665

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G C  G  ++A  +  +M   GI P++ T   L +    + GH+
Sbjct: 666 DGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF--DEGHM 708



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 207/454 (45%), Gaps = 31/454 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K +++    +++ M++     S   +  +I      G  ++A  +   +   G
Sbjct: 280 VITGLARKGDLEEAAEMVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEG 338

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV  YN ++  LL   +       +  M+  G++P+V TYN LL   CK   +  A 
Sbjct: 339 IMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEAL 398

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  ++ + G AP  ++Y  ++   C+LG +EEAR L                   KE  
Sbjct: 399 LLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRL-------------------KE-- 437

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                    EMV++G  P+V TY+ ++    +  ++  +     +M  +G  P+  ++ +
Sbjct: 438 ---------EMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNT 488

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
            ++  L  G   +A  L   M+ EG   + V Y+ LI GLC  G++++A  +  +M  N 
Sbjct: 489 RIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNG 548

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  TY+ LI    + G L  A + +  MIS+G +P+ V YT  +   C+    + A+
Sbjct: 549 LQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAY 608

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
               KM  E   PN +T+N  I  LC  GR   A +   +M +   +PN  TY  L+DG 
Sbjct: 609 GWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGN 668

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            +    ++A     E+ + GI  + +T+  +  G
Sbjct: 669 CKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG 702



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 171/362 (47%), Gaps = 5/362 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  +++  Q    +M+  G+      + S++N Y + G  ++AL +F  +R  G
Sbjct: 349 MIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG 408

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PTV  YN ++D             +   M   G  P+V TY IL+K       +  A 
Sbjct: 409 LAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAR 468

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
           +   EM +KG  PD  +Y T + +   LG + +A   RE+ M  G  S    YN LI+GL
Sbjct: 469 EFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGL 528

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + +A  L  +MV  G+ P+ ITY+ +I + C+ G +  +      M   G  P+ 
Sbjct: 529 CKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSA 588

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T  +  Y   G  + A   + +M+ EG  PN + Y+ LIH LC  G    A    ++
Sbjct: 589 VTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHE 648

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    PN  TY+ LIDG  K GN   A + +  M  NG  P+ + +  + K   + +M
Sbjct: 649 MLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHM 708

Query: 356 FH 357
            H
Sbjct: 709 NH 710



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 9/236 (3%)

Query: 38  NSYRRVGLAEQALKMFYRIREF----GLKPTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           N+  R  L   A+   +R+RE     G+      YN ++D L      +    +   M  
Sbjct: 487 NTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVH 546

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           +G++P+  TY  L+ A C+   +  A K   +M + G AP AV+YT  + + C+ G +  
Sbjct: 547 NGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYS 606

Query: 154 ARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A     +    GV      YN LI+ LC+  + + A+    EM++RG+ PN  TY+ +I 
Sbjct: 607 AYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLID 666

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
             C  GN E ++    +M   G +P+  +  +L KG+  G   H    L N ++ E
Sbjct: 667 GNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGHMNHAIEYLENAVLGE 722


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 288/588 (48%), Gaps = 62/588 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREF 59
           MIE      +   V+ LL ++++E     E  FI V  +Y +  L E+A+ +F+R + EF
Sbjct: 83  MIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEF 142

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIY-----SNMKRDGMEPNVFTYNILLKALCKNN 114
             K +VK +N +L+ ++ E  +      Y     SNM  + + PN  ++N+++KALCK  
Sbjct: 143 RCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLSFNLVIKALCKLG 201

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
            VD A ++   M  K C PD  +Y T                              L++G
Sbjct: 202 FVDRAIEVFRGMPEKKCLPDGYTYCT------------------------------LMDG 231

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCKE +I+EA  LL EM   G  P+ + Y+ +I  LC  G++     ++  MF++GC PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPN 291

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++ +L+ G  L G+  +A  L  RM+    +PN V Y TLI+GL       +   +  
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLI 351

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            MEE     N   YS LI G  K G    A  +W +M   GC PN+V Y+ ++  LC+  
Sbjct: 352 SMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREG 411

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             ++A  ++  M    C PN  T+++ +KG    G  + A+++  +M +  C  N   Y+
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYS 471

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DGL  V RVKEA  + +++   GI+ + V Y++++ G+C  G +  A +L  +ML +
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQ 531

Query: 475 ---GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC-NSG 530
               ++ D +T+NI++   C Q  V+ A+ LL+ +   G  +PD+I+  + L  +   S 
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRG-CDPDVITCNTFLNTLSEKSD 590

Query: 531 GMQEAFIYLQK--------------------MLNEGICPNFATWNVLV 558
             +E   +L++                    ML + + P  +TW ++V
Sbjct: 591 SCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIV 638



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/366 (25%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T S++I +  ++G+  +   +L ++ +        SF  + + Y       +A DL++RM
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRM 138

Query: 262 IREGFLP-NVVAYSTLIHGLCSNGSMDEAVSV-SYQMEEN---SCPPNVTTYSALIDGFA 316
           + E     +V +++++++ + + G     +    Y +  N   +  PN  +++ +I    
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G +  A +++  M    C P+   Y  ++  LC+     +A  L+++M  E C P+ V
Sbjct: 199 KLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +N  I GLC  G +    KL+D M    C PN  TYN L+ GL    ++ +A  L+  +
Sbjct: 259 IYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
                  N VTY T+++G+ +    ++  +LL  M   G +L+   ++++I    K+GK 
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKA 378

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A+ L  ++   G   P+I+ Y++++ G+C  G   EA   L  M++ G  PN  T++ 
Sbjct: 379 EEAMTLWKKMAEKG-CRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSS 437

Query: 557 LVRSLF 562
           L++  F
Sbjct: 438 LMKGFF 443


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/567 (29%), Positives = 274/567 (48%), Gaps = 12/567 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L +     G + +L  MK  G+  +   F  V+ SY R G    ALK+   ++  G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + I N  +D  +  NR          M+  G+ PNV TYN +++  C  +RV+ A 
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +LL +M +KGC PD VSY TI+  +CK  ++ E R+L  +      +      YN LI+ 
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHM 392

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K    +EA W L +  ++G   + + YS I+ +LC  G +  +  ++ +M    C P+
Sbjct: 393 LTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPD 449

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+++ G+   G   +A  L   M   G  PN V+Y+ L++G+C  G   EA  +  
Sbjct: 450 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 509

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             EE+   PN  TYS ++ G  + G L  A  +   M+  G  P  V    +++ LC++ 
Sbjct: 510 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 569

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             H+A   +E+   + C  N V F T I G C    +D A+ +LD M       ++ TY 
Sbjct: 570 RTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYT 629

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D L +  R+ EA EL+ ++   GI    VTY T++H  C+ G V +   +L KM I 
Sbjct: 630 TLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM-IS 688

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             K   I +N +I   C  GK+  A  LL ++      + D  +  +L+ G    G    
Sbjct: 689 RQKCRTI-YNQVIEKLCVLGKLEEADTLLGKVLRTASRS-DAKTCYALMEGYLKKGVPLS 746

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           A+    +M N  + P+      L + L
Sbjct: 747 AYKVACRMFNRNLIPDVKMCEKLSKRL 773



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/488 (28%), Positives = 251/488 (51%), Gaps = 19/488 (3%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-REL 157
           +   Y  +L+ L K     G+ ++LV M  +G      +++ ++ S  + GQ+ +A + L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 158 AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            +   +GV     + N  I+   + +++E+A   L  M   GI PNV+TY+ +I   CD+
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG-GRTHEASDLWNRMIRE-GFLPNVV 271
             VE ++ +L  M  +GC P+  S+ +++ GYL    R  E  DL  +M +E G +P+ V
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIM-GYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TLIH L  +   DEA+      +E     +   YSA++    K G +  A  + N M
Sbjct: 385 TYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM 444

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
               C P+VV YT +V   C+     +A  L++ M      PNTV++   + G+C  G+ 
Sbjct: 445 ---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 501

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A ++++  +++   PN  TY+ ++ GL R  ++ EA ++V E+   G     V  N +
Sbjct: 502 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 561

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L  +CR G   EA + + + L +G  ++ + F  +I+ +C+  +++ A+ +LD +    +
Sbjct: 562 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 621

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
            + D+ +YT+L+  +   G + EA   ++KML++GI P   T+    R++      +G V
Sbjct: 622 -HADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTY----RTVIHRYCQMGKV 676

Query: 572 YILDDIMA 579
              DD++A
Sbjct: 677 ---DDLVA 681



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 188/427 (44%), Gaps = 48/427 (11%)

Query: 14  VQYLLQQM-KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           V+ L+++M K  G+   +  + ++I+   +   A++AL      +E G +     Y+ I+
Sbjct: 366 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 425

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
            AL  E R S    + + M      P+V TY  ++   C+   VD A KLL  M   G  
Sbjct: 426 HALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 482

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL---------------------AMR----------- 160
           P+ VSYT +++ +C+ G+  EARE+                      +R           
Sbjct: 483 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 542

Query: 161 --------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                   F  G    N L+  LC++ +  EA   + E +++G   NV+ ++T+I   C 
Sbjct: 543 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 602

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              ++ +L +L  M++   + ++ ++T+L+      GR  EA++L  +M+ +G  P  V 
Sbjct: 603 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 662

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           Y T+IH  C  G +D+ V++  +M     C    T Y+ +I+     G L  A  +  ++
Sbjct: 663 YRTVIHRYCQMGKVDDLVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKV 719

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +      +      +++   +  +   A+ +  +M   N  P+        K L   G+V
Sbjct: 720 LRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKV 779

Query: 392 DWAMKLL 398
           D A KL+
Sbjct: 780 DEADKLM 786



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 142/328 (43%), Gaps = 38/328 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D  + LLQ M   G   +   + +++N   R G + +A +M     E    P    Y+
Sbjct: 465 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS 524

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+  L  E + S    +   M   G  P     N+LL++LC++ R   A K + E  NK
Sbjct: 525 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 584

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEA 184
           GCA + V++TT++   C+  +++ A  +      +   + V  Y  L++ L K+ +I EA
Sbjct: 585 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEA 644

Query: 185 FWLLCEMVDRGIDPNVITYSTII---------------------------------SSLC 211
             L+ +M+ +GIDP  +TY T+I                                   LC
Sbjct: 645 TELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLC 704

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            +G +E +  +LG++       +  +  +L++GYL  G    A  +  RM     +P+V 
Sbjct: 705 VLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVK 764

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
               L   L   G +DEA  +  ++ E 
Sbjct: 765 MCEKLSKRLVLKGKVDEADKLMLRLVER 792



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           +VFTY  L+  L K  R+  A +L+ +M +KG  P  V+Y T++   C++G+V++   + 
Sbjct: 624 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 683

Query: 159 MRFGSGV---SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            +  S     ++YN +I  LC   K+EEA  LL +++      +  T   ++      G 
Sbjct: 684 EKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 743

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             ++  +  +MF R   P++     L K  +L G+  EA  L  R++  G +
Sbjct: 744 PLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHI 795


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 268/527 (50%), Gaps = 6/527 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           Y +  + EQ L +F ++ +  L P VK  N IL  L  ++  S    +Y  M   G++P 
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-- 157
           + TYN LL + CK  +V     LL EM  +GCAP+ V+Y  +++ + K G+ E+A+ L  
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293

Query: 158 -AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             ++ G  VS   YN LI G   +  + EA  L  EMV +G  P V TY++ I  LC +G
Sbjct: 294 EMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG 353

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +  ++  L  M      P++ S+ +L+ GY   G   +A  L++ +      P +V Y+
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TL+ GLC  G ++ A  +  +M      P++ TY+ L++G  K G+L  A + ++ M+  
Sbjct: 414 TLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE 473

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G   +  AY   +    +     +A SL E+M  +  PP+ + +N  + GLC  G ++ A
Sbjct: 474 GLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 533

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            +LL +M     +P+  TY  ++   L   R+++  E+  E+   G+  ++VTY  ++HG
Sbjct: 534 SELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
               G +  AF    +M  +G   + IT+N +I   CK  +++ A      +   G + P
Sbjct: 594 HAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF-P 652

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  SYT L+   CN G  QEA    ++ML+ G+ P+  T + L++ L
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 259/497 (52%), Gaps = 10/497 (2%)

Query: 71  ILDALL-AENRFSMIN---PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           ILD L+   ++ SM+     ++  M +  + P+V   N +L+ L   + +  A ++   M
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKI 181
           G  G  P  V+Y T++ S CK G+V++  +L     R G   +   YN LINGL K+ + 
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF 285

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E+A  L+ EM+  G+  +  TY+ +I    + G +  +L +  +M ++G +P + ++ S 
Sbjct: 286 EQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSF 345

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    GR  +A    + M+    LP+VV+Y+TLI+G C  G++ +A  +  ++     
Sbjct: 346 IYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYL 405

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P + TY+ L+DG  + G L  A Q+   MI+ G +P++V YT +V   C+      A  
Sbjct: 406 FPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQE 465

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
             ++M  E    ++  + T I G    G    A  L ++M      P++  YN ++DGL 
Sbjct: 466 FFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLC 525

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           ++  ++EA EL+ ++   G+  + VTY +I+H     G + +  ++  +ML +G     +
Sbjct: 526 KLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVV 585

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+ ++I+ +  +G++  A      ++  G   P++I+Y SL+ G+C    M +A+ +  +
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGIL-PNVITYNSLINGLCKVRRMDQAYNFFAE 644

Query: 542 MLNEGICPNFATWNVLV 558
           M+ +GI PN  ++ +L+
Sbjct: 645 MVEKGIFPNKYSYTILI 661



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 220/441 (49%), Gaps = 5/441 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  G + ++  +  +IN   + G  EQA  +   + + GLK +   YN ++    
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   +    +   M   G  P V TYN  +  LCK  R+  A + L +M      PD V
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T++   C+LG + +A  L     ++     +  YN L++GLC++ ++E A  L  EM
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++ GI P+++TY+ +++  C +G++  +     +M   G   + +++ + + G L  G T
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L   M+ +GF P+++ Y+ ++ GLC  G+++EA  +  +M  +   P+  TY+++
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I    + G L    +I+  M+S G +P+VV YT ++          +A     +M  +  
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T+N+ I GLC   R+D A     +M +    PN  +Y  L++    +   +EA  
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 432 LVTEIEKCGIQLNIVTYNTIL 452
           L  ++   G+Q +  T++ +L
Sbjct: 676 LYKQMLDRGVQPDSCTHSALL 696



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 239/523 (45%), Gaps = 55/523 (10%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-----------GCAPDAVSYTTI 141
           + G   + F +  +L+ L +NN +  AY ++  + N            GC    VS   +
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKIL 167

Query: 142 ---VSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
              +    K   VE+      + +  R    V   N ++  L  +  + +A  +   M +
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
            GI P ++TY+T++ S C  G V+  L +L +M  RGC PN  ++  L+ G    G   +
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L   M++ G   +   Y+ LI+G  + G + EA+S+  +M      P V TY++ I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G +  A Q  + M++N   P+VV+Y  ++   C+     +A  L +++      P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL------------- 420
             VT+NT + GLC  G ++ A +L  +M      P+I TY  L++G              
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 421 ----------------------LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
                                 L++     AF L  E+   G   +++ YN ++ G+C+ 
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + EA +LL KM+ +G   D +T+  II+A+ + G++    ++   +   G   P +++
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-LTPSVVT 586

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           YT L+ G    G ++ AFIY  +M  +GI PN  T+N L+  L
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 202/442 (45%), Gaps = 43/442 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K E +  + L+ +M   G+  S   +  +I  Y   G+  +AL +   +   G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV-------------------- 100
             PTV  YN  +  L    R S      S+M  + + P+V                    
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 101 ---------------FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                           TYN LL  LC+   ++ A +L VEM N+G APD V+YT +V+  
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 146 CKLGQVEEARELAMR-FGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CK+G +  A+E        G+ +    Y   I G  K      AF L  EM+ +G  P++
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           I Y+ ++  LC +GN+E +  +L +M   G  P+  ++TS++  +L  GR  +  +++  
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+ +G  P+VV Y+ LIHG    G ++ A     +M+E    PNV TY++LI+G  K   
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A   +  M+  G  PN  +YT ++   C    + +A SL ++M      P++ T + 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 381 FIKGL---CGCGRVDWAMKLLD 399
            +K L   C    V     LLD
Sbjct: 695 LLKQLGKDCKLQAVRQLESLLD 716


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 141/460 (30%), Positives = 249/460 (54%), Gaps = 9/460 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG- 164
           L+ L +N  ++  +K L +M  +G  PD ++ T+++  +CK G+  +A R + +   SG 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 165 ---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN LI+G CK  +I  A  LL  M    + P+V+TY+TI+ +LCD G ++ ++ 
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +   R C P++ ++T L++         +A  L + M  +G  P+VV Y+ LI+G+C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA+     M    C PNV T++ ++      G  + A +    MI  GCSP+VV
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++  LC+  +  +A  ++EKM    C PN++++N  +  LC   +++ A++ LD M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               C P+I TYN LL  L +  +V  A E++ ++   G    ++TYNT++ G+ + G  
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A +LL +M  +G K D IT++ ++    ++GKV+ AI     +   G   P+ I+Y S
Sbjct: 474 DDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG-VKPNAITYNS 532

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G+C +     A  +L  M+  G  P   ++ +L+  L
Sbjct: 533 IMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572



 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 242/470 (51%), Gaps = 8/470 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+  K    +   G  P +     ++  L    +      +   ++  G  P+V 
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RE 156
           TYN+L+   CK   +  A +LL  M     +PD V+Y TI+ ++C  G+++EA     R+
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +       V  Y  LI   CKE  + +A  LL EM D+G  P+V+TY+ +I+ +C  G +
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M   GC PN+ +   +L+     GR  +A      MIR+G  P+VV ++ L
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+ LC  G +  A+ V  +M ++ C PN  +Y+ L+    K   +  A +  + M+S GC
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGC 418

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  ++  LC++     A  ++ ++  + C P  +T+NT I GL   G+ D A+K
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LLD+MK     P+I TY+ L+ GL R  +V EA     ++E+ G++ N +TYN+I+ G+C
Sbjct: 479 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 538

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +A   V A   L  M+  G K    ++ I+I     +G    A++LL+ +
Sbjct: 539 KARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 246/468 (52%), Gaps = 3/468 (0%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P++     L++ LCK  +   A +++  + + G  PD ++Y  ++S  CK G++  A +L
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              M     V  YN ++  LC   K++EA  +L   + R   P+VITY+ +I + C    
Sbjct: 203 LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG 262

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  ++ +L +M  +GC P++ ++  L+ G    GR  EA    N M   G  PNV+ ++ 
Sbjct: 263 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++  +CS G   +A     +M    C P+V T++ LI+   + G +  A  +  +M  +G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C+PN ++Y  ++  LC++    +A   ++ M    C P+ VT+NT +  LC  G+VD A+
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 442

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++L+Q+    C P + TYN ++DGL +V +  +A +L+ E++  G++ +I+TY+T++ G+
Sbjct: 443 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            R G V EA      +   G K +AIT+N I+   CK  +   AI  L  +   G   P 
Sbjct: 503 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARG-CKPT 561

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             SY  L+ G+   G  +EA   L ++ + G+    +   V+V+  F+
Sbjct: 562 ETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKIPFN 609



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 220/428 (51%), Gaps = 39/428 (9%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGI-------------------------------- 196
           N  +  L +  ++EE F  L +MV RG                                 
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 197 ---DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
               P+VITY+ +IS  C  G + ++L +L +M V   +P++ ++ ++L+     G+  E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKE 230

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A ++ +R ++    P+V+ Y+ LI   C    + +A+ +  +M +  C P+V TY+ LI+
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G L  A +  N M S GC PNV+ +  +++ +C    +  A   + +M  + C P
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + VTFN  I  LC  G +  A+ +L++M Q+ C PN  +YN LL  L +  +++ A E +
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             +   G   +IVTYNT+L  +C+ G V  A ++L ++  +G     IT+N +I    K 
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           GK ++AI+LLD ++G G   PDII+Y++L+ G+   G + EA  +   +   G+ PN  T
Sbjct: 471 GKTDDAIKLLDEMKGKG-LKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 529

Query: 554 WNVLVRSL 561
           +N ++  L
Sbjct: 530 YNSIMLGL 537



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 205/411 (49%), Gaps = 8/411 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+ Y + G    AL++  R+    + P V  YN IL  L    +      +     +  
Sbjct: 186 LISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRE 242

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+V TY IL++A CK + V  A KLL EM +KGC PD V+Y  +++ ICK G+++EA 
Sbjct: 243 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 302

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                  S      V  +N ++  +C   +  +A   L EM+ +G  P+V+T++ +I+ L
Sbjct: 303 RFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFL 362

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G +  ++ +L +M   GC PN  S+  LL       +   A +  + M+  G  P++
Sbjct: 363 CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDI 422

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+TL+  LC +G +D AV +  Q+    C P + TY+ +IDG +K G    A ++ + 
Sbjct: 423 VTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDE 482

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  P+++ Y+ +V  L +     +A +    +      PN +T+N+ + GLC   +
Sbjct: 483 MKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQ 542

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
              A+  L  M    C P  T+Y  L++GL      KEA EL+ E+   G+
Sbjct: 543 TVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 201/368 (54%), Gaps = 5/368 (1%)

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +E     L  M  RG  P+I + TSL++G    G+T +A+ +   +   G +P+V+ Y
Sbjct: 124 GELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITY 183

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + LI G C  G +  A+ +  +M   S  P+V TY+ ++     +G L  A ++ +R + 
Sbjct: 184 NVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQ 240

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             C P+V+ YT +++  C+ +   QA  L+++M  + C P+ VT+N  I G+C  GR+D 
Sbjct: 241 RECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 300

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++ L+ M  Y C PN+ T+N +L  +    R  +A + + E+ + G   ++VT+N +++
Sbjct: 301 AIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILIN 360

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +CR G++  A  +L KM   G   +++++N +++A CK  K+  AI+ LD +   G + 
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCY- 419

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           PDI++Y +LL  +C  G +  A   L ++ ++G  P   T+N ++  L S +G       
Sbjct: 420 PDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGL-SKVGKTDDAIK 478

Query: 574 LDDIMANK 581
           L D M  K
Sbjct: 479 LLDEMKGK 486



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 195/398 (48%), Gaps = 40/398 (10%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C+   +   LQ +    VS     + +++ +    G  ++A+++  R  +    P V  Y
Sbjct: 191 CKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITY 250

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             +++A   E+       +   M+  G +P+V TYN+L+  +CK  R+D A + L  M +
Sbjct: 251 TILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS 310

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV------------------ 167
            GC P+ +++  I+ S+C  G+  +A +     +R G   SV                  
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGR 370

Query: 168 -------------------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                              YN L++ LCK+ K+E A   L  MV RG  P+++TY+T+++
Sbjct: 371 AIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLT 430

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           +LC  G V+ ++ IL Q+  +GC+P + ++ +++ G    G+T +A  L + M  +G  P
Sbjct: 431 ALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +++ YSTL+ GL   G +DEA++  + +EE    PN  TY++++ G  KA   + A    
Sbjct: 491 DIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFL 550

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
             M++ GC P   +Y  +++ L    +  +A  L+ ++
Sbjct: 551 AYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 178/354 (50%), Gaps = 5/354 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   ++  +     LL +M+ +G       +  +IN   + G  ++A++    +  +G
Sbjct: 253 LIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYG 312

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  +N IL ++ +  R+       + M R G  P+V T+NIL+  LC+   +  A 
Sbjct: 313 CQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAI 372

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGL 175
            +L +M   GC P+++SY  ++ ++CK  ++E A E L +    G    +  YN L+  L
Sbjct: 373 DVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTAL 432

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+ K++ A  +L ++  +G  P +ITY+T+I  L  VG  + ++ +L +M  +G  P+I
Sbjct: 433 CKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDI 492

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++L+ G    G+  EA   ++ +   G  PN + Y++++ GLC       A+     
Sbjct: 493 ITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAY 552

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           M    C P  T+Y  LI+G A  G    A ++ N + S G      A   +VK+
Sbjct: 553 MVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKI 606



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 119/218 (54%), Gaps = 4/218 (1%)

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           ++ L +N    +    +E M      P+ +   + I+GLC  G+   A ++++ ++    
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ TYN L+ G  +   +  A +L   +++  +  ++VTYNTIL  +C +G + EA +
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L + +      D IT+ I+I A CK+  V  A++LLD +R  G   PD+++Y  L+ GI
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKG-CKPDVVTYNVLINGI 292

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           C  G + EA  +L  M + G  PN  T N+++RS+ S 
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCST 330



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 93/168 (55%), Gaps = 5/168 (2%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N  L  L+R   ++E F+ + ++   G   +I+   +++ G+C+ G   +A +++  +  
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G   D IT+N++I  YCK G++ +A+QLLDR+      +PD+++Y ++L  +C+SG ++
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRM----SVSPDVVTYNTILRTLCDSGKLK 229

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           EA   L + +     P+  T+ +L+ +     G +G    L D M +K
Sbjct: 230 EAMEVLDRQMQRECYPDVITYTILIEATCKESG-VGQAMKLLDEMRDK 276


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/554 (27%), Positives = 275/554 (49%), Gaps = 7/554 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E D  + +L +M+  G   +   +  +I    R G  E+A      + ++GL P    Y 
Sbjct: 237 EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYG 296

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L    R +    +   M    ++PNV  Y  L+    +    D A+K++ EM   
Sbjct: 297 ALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA 356

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  P+ ++Y  +V  +CK+GQ++ A  L  +            YN +I G  + H  ++A
Sbjct: 357 GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDA 416

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F LL EM + GI PNV TYS +I  LC  G  E +  +L +M  +G  PN   +  L+ G
Sbjct: 417 FRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISG 476

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G    A +++++M +   LP++  Y++LI GL   G ++E+     QM+E    PN
Sbjct: 477 YCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPN 536

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TYS LI G+ K G+L  A Q+  RM+  G  PN V Y  +++   +++   +  S  +
Sbjct: 537 EFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFK 596

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  +    +   +   I  L   G ++ A ++L  +++   +P++  Y+ L+ GL +  
Sbjct: 597 SMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 656

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             ++AF ++ E+ K G+  NIV YN ++ G+C++G +  A  +   +L +G   + +T+ 
Sbjct: 657 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 716

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I   CK G ++NA  L + +   G   PD   Y+ L  G  ++G +++A   +++M  
Sbjct: 717 SLIDGSCKVGDISNAFYLYNEMLATG-ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFL 775

Query: 545 EGICPNFATWNVLV 558
            G   + +++N LV
Sbjct: 776 RGHA-SISSFNNLV 788



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/461 (30%), Positives = 233/461 (50%), Gaps = 8/461 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG- 162
           L+A CK    D A K+LVEM  +GC  + V+Y  +++ +C+ G VEEA   ++    +G 
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 163 --SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
              G + Y ALINGLCK  +  EA  LL EM    + PNV+ Y+ +I      GN + + 
Sbjct: 289 VPDGFT-YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            ++ +M   G  PN  ++ +L++G    G+   AS L  +M+R+   P+ + Y+ +I G 
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
             + S  +A  +  +ME     PNV TYS +I G  ++G    AS +   M + G  PN 
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  ++   C+      A  + +KM   N  P+   +N+ I GL   GRV+ + K   Q
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++   LPN  TY+ L+ G L+   ++ A +LV  +   G++ N V Y  +L    ++  
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +       ML +G  LD   + I+I+     G +  A ++L  I   G   PD+  Y+
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV-PDVHVYS 646

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           SL+ G+C +   ++AF  L +M  +G+ PN   +N L+  L
Sbjct: 647 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGL 687



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/529 (23%), Positives = 240/529 (45%), Gaps = 23/529 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  E +    LL++M  +G+  +  V+  +I+ Y R G    A ++F ++ +  
Sbjct: 438 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 497

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++  L    R       ++ M+  G+ PN FTY+ L+    KN  ++ A 
Sbjct: 498 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAE 557

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE-ARELAMRFGSGV----SVYNALINGL 175
           +L+  M + G  P+ V Y  ++ S  K   +E+ +         GV     +Y  LI+ L
Sbjct: 558 QLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL 617

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                +E AF +L  +   G  P+V  YS++IS LC   + E + GIL +M  +G +PNI
Sbjct: 618 SSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 677

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + +L+ G    G    A +++N ++ +G +PN V Y++LI G C  G +  A  +  +
Sbjct: 678 VCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNE 737

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+   YS L  G + AG+L  A  +   M   G + ++ ++  +V   C+   
Sbjct: 738 MLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGK 796

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +   L+  +      PN +T    I GL   G++     +  +++Q         ++ 
Sbjct: 797 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 856

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L                +  I +  I L++V  + ++   C+ G + +A  L   ++ + 
Sbjct: 857 L---------------FMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKS 899

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +   ++  I+   C++GK++ A+ LL  +   G   P +++   + W
Sbjct: 900 APMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFW 948


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 295/587 (50%), Gaps = 22/587 (3%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +++ L +   +G S   G  + + + +  +   E A+ +F  +      P+V  +  ++ 
Sbjct: 27  IRHALAKKSRDGESGFGGESLKLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMG 86

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            ++   R  ++  ++  M+   +  N +++ IL+K  C  +++  A     ++   G  P
Sbjct: 87  VVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHP 146

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
             V+++T++  +C   ++ EA +L  +     V  +  L+NGLC+E ++ EA  LL  M+
Sbjct: 147 TVVTFSTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRML 206

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQM-FVRGCNPNI-----HSFTSLLKGYL 246
           + G+ PN ITY TI+  +C +G+  ++L +L +M  V    PN+        T ++ G+ 
Sbjct: 207 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFC 266

Query: 247 LGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             GR  EA  L   M+ R+   P+VV Y+ LI+     G   EA  +  +M      P+ 
Sbjct: 267 SSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPST 326

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS++IDGF K   L  A  ++  M + GCSP+++ +  ++   C+         L+ +
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 386

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M       NT+T+ T I G C  G ++ A  LL +M      PN+ T N LLDGL    +
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK 446

Query: 426 VKEAFELVTEIEKC-----------GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +K+A E+   ++K            G++ ++ TYN ++ G+   G  +EA +L  +M   
Sbjct: 447 LKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 506

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D IT+N +I+  CKQ +++ A Q+ D + G   ++P+++++T+L+ G C +G + +
Sbjct: 507 GIVPDTITYNSVIHGLCKQSRLDEATQMFDSM-GSKSFSPNVVTFTTLINGYCKAGRVDD 565

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYILDDIMAN 580
                 +M   GI  N  T+  L+   F  +G++ G + I  ++MA+
Sbjct: 566 GLELFCEMGRRGIVANAITYITLIHG-FRKVGNINGALDIFQEMMAS 611



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 253/556 (45%), Gaps = 62/556 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D V  L ++M++  V C+   F  ++  +        AL  F +I + G  PTV  ++
Sbjct: 93  RLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFS 152

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L  E+R S    ++  M +    PNV T+  L+  LC+  RV  A  LL  M   
Sbjct: 153 TLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLED 208

Query: 130 GCAPDAVSYTTIVSSICKLGQV-------------------------------------- 151
           G  P+ ++Y TIV  +CK+G                                        
Sbjct: 209 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSS 268

Query: 152 ---EEARELAM------RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
               EA++L        +    V  YNALIN   KE K  EA  L  EM+ RGI P+ IT
Sbjct: 269 GRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTIT 328

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           YS++I   C    ++ +  +   M  +GC+P+I +F +L+ GY    R  +   L + M 
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             G + N + Y+TLIHG C  G ++ A  +  +M  +   PNV T + L+DG    G L 
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLK 448

Query: 323 GASQIWNRMIS-----------NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            A +++  M             NG  P+V  Y  ++  L     F +A  L E+M     
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+T+T+N+ I GLC   R+D A ++ D M      PN+ T+  L++G  +  RV +  E
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+ + GI  N +TY T++HG  + G +  A  +  +M+  G   D IT   ++    
Sbjct: 569 LFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLW 628

Query: 492 KQGKVNNAIQLLDRIR 507
            + ++  A+ +L+ ++
Sbjct: 629 SKEELKRAVAMLEDLQ 644



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 143/322 (44%), Gaps = 24/322 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+   ++  +D  +++   M  +G S     F ++I  Y R    +  +K+ + + E G
Sbjct: 332 MIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      Y  ++         +    +   M   G+ PNV T N LL  LC N ++  A 
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451

Query: 121 KLLVEMGNK-----------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SG 164
           ++   M              G  PD  +Y  ++S +   G+  EA EL            
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN++I+GLCK+ +++EA  +   M  +   PNV+T++T+I+  C  G V+  L +  
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RG   N  ++ +L+ G+   G  + A D++  M+  G  P+ +    ++ GL S  
Sbjct: 572 EMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKE 631

Query: 285 SMDEAV--------SVSYQMEE 298
            +  AV        SV YQ+E+
Sbjct: 632 ELKRAVAMLEDLQMSVGYQLED 653


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 278/553 (50%), Gaps = 12/553 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M   G       +  +I+   ++G  ++A ++F R+R+ G       +  +++AL 
Sbjct: 146 ILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALS 205

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +Y  M   G EP +   + L+ ALCK  +VD A ++   +  K  A   V
Sbjct: 206 NHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRV 265

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++   CKLG+V++  +L ++         +  YN L+ G  + +++++A  L   +
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  PN  TY+TII  L D   +E +     +        ++ S+T+++KG     R 
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRI 379

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +L+ ++   G  PNVVAY+ +I GL   G +++ +     M  +SC P  TTY+ +
Sbjct: 380 DEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVV 439

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  KA  L  A +++ +M+  GC P+ + YT ++    + +   +A  L++ M  +  
Sbjct: 440 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 499

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P  VT+ + + G C    ++ A +++ QM++  C P +  +  LL   L   R +EA++
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 559

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++TE+   G   +++ Y +++  +   G V EA  +   M+ +G   DA+T+  II  + 
Sbjct: 560 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFS 619

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G V  A ++L+ +   G   PD  +Y SL+ G      + +AF    +M+  GI PN 
Sbjct: 620 KIGNVEAAGEILELMAKSG-VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 678

Query: 552 ATWNVLVRSLFSN 564
            T+NVL+  LF +
Sbjct: 679 VTFNVLMHGLFKD 691



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/586 (26%), Positives = 273/586 (46%), Gaps = 69/586 (11%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+AL     +   GL P V   N +L+ L    +      ++  M   G EP + +YN +
Sbjct: 2   EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMRFG 162
           +  L   +++D AYK    M + GC PD +++TT++   CK GQ +    L      RF 
Sbjct: 62  ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR 121

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V +Y ++I+G CK   ++  F +L EM+  G  P+   Y  +I  LC +G V+ +  +
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP-------------- 268
             +M   GC  +  +F +L++     G+  EA +L+  MI  G+ P              
Sbjct: 182 FERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCK 241

Query: 269 ---------------------NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                                + VAY++L+ G C  G +D+ + +  QM E    P++ T
Sbjct: 242 AGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQT 301

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPN---------------------------- 339
           Y+ L+ GF++A  L  A +++  + S GC PN                            
Sbjct: 302 YNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL 361

Query: 340 -VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            V++YT ++K L  +    +A  L EK+    C PN V +   I GL   GR++  +K  
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           + M    C+P  TTY  ++DGL +   + +A ++  ++ + G   + +TY T++ G  +A
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 481

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
             + EA +LL  ML +G +  A+T+  I++ +CK   +N A +++ ++R  G   P +  
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERG-CEPGLFI 540

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +TSLL    + G  +EA+  L +M   G  P+   +  L+  LFS 
Sbjct: 541 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 165/669 (24%), Positives = 301/669 (44%), Gaps = 112/669 (16%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++M+  G       F+++I +    G  ++A +++  + E G
Sbjct: 165 LIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNM--KR----------------------DGM 96
            +P +++ + ++ AL    +    N IY  +  K+                      DG+
Sbjct: 225 YEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGL 284

Query: 97  E-----------PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           +           P++ TYNIL+    + NR+D A +L   + + GC P+A +YTTI+  +
Sbjct: 285 KLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGL 344

Query: 146 CKLGQVEEARELAMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
               ++EEA+     F   + V  Y  +I GL    +I+EA  L  ++   G  PNV+ Y
Sbjct: 345 YDAQRMEEAKAF---FDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAY 401

Query: 204 STIISSLCDVGNVETSL-----------------------------------GILGQMFV 228
           + +I  L   G +E  L                                    +  QM  
Sbjct: 402 TAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQ 461

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +GC P+  ++T+L+ G+    +  EA  L + M+ +G  P  V Y +++HG C    ++E
Sbjct: 462 KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINE 521

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  V  QM E  C P +  +++L+  +   G    A Q+   M + GC+P+V+ YT ++ 
Sbjct: 522 AKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLID 581

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
           +L       +A  + + M  + C P+ +T+ T I+     G V+ A ++L+ M +    P
Sbjct: 582 LLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGP 641

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC------------ 456
           +   YN L+DG +++ RV +AF +   +   GI+ N VT+N ++HG+             
Sbjct: 642 DCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLF 701

Query: 457 ------------------------RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
                                   +AG V EAF    +M+  G   +  T+  +IY+  K
Sbjct: 702 KEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAK 761

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            G++  A +L++ +   G  NPD+ +Y++L+ G+ +S  +  A+   Q+M+  G  PN  
Sbjct: 762 AGRIPEAKKLVEDMVKLG-VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEV 820

Query: 553 TWNVLVRSL 561
           T+ VL R  
Sbjct: 821 TYKVLRRGF 829



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 236/470 (50%), Gaps = 6/470 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + +VI         ++A ++F +++  G  P V  Y  ++D LL   R       + +M 
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
                P   TY +++  LCK   +  A K+  +M  KGC PD ++YTT++    K  +++
Sbjct: 426 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 485

Query: 153 EAREL-AMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EAR+L  +    G       Y ++++G CK   I EA  ++ +M +RG +P +  +++++
Sbjct: 486 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 545

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           S     G  E +  +L +M  RGC P++  +TSL+      GR  EA  +++ MI +G  
Sbjct: 546 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 605

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+ + Y T+I      G+++ A  +   M ++   P+   Y++L+DG+ K   +  A  +
Sbjct: 606 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 665

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLC 386
           ++RM+++G  PN V +  ++  L ++    +A SL ++M   +  PP  V++   I GL 
Sbjct: 666 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLG 725

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             GRV  A     +M     +P   TY  L+  L +  R+ EA +LV ++ K G+  ++ 
Sbjct: 726 KAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQ 785

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            Y+ ++ G+  + MV  A+ +  +M+  G   + +T+ ++   +   G+ 
Sbjct: 786 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 835



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 232/486 (47%), Gaps = 7/486 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ID    L +++K  G S +   + +VI+   + G  E  LK F  +    
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT   Y  ++D L           ++  M + G  P+  TY  L+    K +++D A 
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KLL  M  KG  P AV+Y +IV   CKL  + EA+E+  +        G+ ++ +L++  
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             + + EEA+ +L EM  RG  P+VI Y+++I  L   G V  +  +   M  +GC P+ 
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ ++++ +   G    A ++   M + G  P+  AY++L+ G      +D+A  V  +
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNN 354
           M  +   PN  T++ L+ G  K G    A  ++  M+  +   P +V+YT ++  L +  
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A S  ++M      P   T+ + I  L   GR+  A KL++ M +    P++  Y+
Sbjct: 729 RVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 788

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ GL+  + V  A+++  E+ K G   N VTY  +  G   AG  ++  + + +   +
Sbjct: 789 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD-LEAVKQHFSQ 847

Query: 475 GTKLDA 480
           G  ++A
Sbjct: 848 GVAMEA 853


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/536 (29%), Positives = 275/536 (51%), Gaps = 23/536 (4%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS----MINPIYSNMKRD---GMEPN 99
           + ALK+F  +  +    +V+ +N +L  +++  R S    ++  +++ M R+    + P+
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLL-TVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 100 VFTYNILLKALCKNNRVD---GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
             TY IL+   C+  R+     A+ L+++ G      + V +  ++  +C   +V+EA +
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTG--WSLNNTVIFGQLLKGLCDAKRVDEATD 149

Query: 157 LAMR----FGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGI---DPNVITYSTII 207
           + +R    FG  ++V  YN L+ GLC E + EEA  L+  M D G     PNV+TY+T+I
Sbjct: 150 ILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVI 209

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC    V+ + G+   M  +G  PN H++T L+ GYL  G+  E   +   M   G  
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+ V Y+ L+  LC NG   EA ++   +      P+VT Y  L+ G+A  G L      
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSF 329

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            + M+ NG SP+   +  M     +  M  +A  + +KM  +   P  V +   I  LC 
Sbjct: 330 LDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCK 389

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GRVD A+   +QM      P+I  ++ L+ GL  V++ ++A +L  E+   GI+LN   
Sbjct: 390 LGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAF 449

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           +N ++  +CR G V+EA +L+  ML    + D I++N ++  +C  G+++ A +LLD + 
Sbjct: 450 FNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMV 509

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             G   PD  +Y +LL G C +  + +A+   ++ML +G+ P   T+N ++  LF 
Sbjct: 510 SIG-LKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQ 564



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 171/636 (26%), Positives = 270/636 (42%), Gaps = 89/636 (13%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG--LKPTVKIYNHILDALLAE 78
           +KV   SC+   +  +I  + R+G  +     F  I + G  L  TV I+  +L  L   
Sbjct: 86  VKVAPSSCT---YTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTV-IFGQLLKGLCDA 141

Query: 79  NRFSMINPIY-SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG---CAPD 134
            R      I    M   G   NV +YNILLK LC   R + A +L+  M + G     P+
Sbjct: 142 KRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPN 201

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLC 189
            V+YTT++  +CK   V+ A+ +       GV      Y  LI+G     K +E   +L 
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQ 261

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM   G+ P+ + Y+ ++  LC  G    +  I   +  +G  P++  +  LL GY   G
Sbjct: 262 EMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEG 321

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              E     + M+R G  P+   ++ + +       +DEA+ +  +M +    P V  Y 
Sbjct: 322 ALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYG 381

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH------------ 357
           ALID   K G +  A   +N+MI+ G +P++  ++ +V  LC  + +             
Sbjct: 382 ALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQ 441

Query: 358 -----------------------QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
                                  +A  LI+ M   +  P+ +++NT + G C  GR+D A
Sbjct: 442 GIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEA 501

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL-- 452
            KLLD M      P+  TYN LL G  +  R+ +A+ L  E+   G+   +VTYNTIL  
Sbjct: 502 AKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561

Query: 453 ---------------------------------HGVCRAGMVVEAFQLLGKMLIEGTKLD 479
                                            +G+CR   V EAF++   +  +  +LD
Sbjct: 562 LFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLD 621

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T NI+I A  K G+  +A+ L   I   G   PD+ +Y  +   +   G ++E     
Sbjct: 622 IFTINIMIGALLKGGRKEDAMDLFATISAYG-LVPDVETYRLIAENLIKEGSLEELDELF 680

Query: 540 QKMLNEGICPNFATWNVLVRSLFS--NLGHLGPVYI 573
             M   G  PN    N LVR L    ++G  G VY+
Sbjct: 681 SAMEENGTAPNSRMLNALVRWLLHRGDIGRAG-VYL 715



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 246/499 (49%), Gaps = 5/499 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  +LQ+M   G+     ++  +++   + G   +A  +F  +   G+KP V IY  +L 
Sbjct: 256 VVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLH 315

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E   S ++     M R+G+ P+   +NI+  A  K   +D A  +  +M  +  +P
Sbjct: 316 GYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSP 375

Query: 134 DAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
             V+Y  ++ ++CKLG+V++A  +       GV+    V+++L+ GLC   K E+A  L 
Sbjct: 376 GVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLF 435

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E++D+GI  N   ++ ++ +LC  G V  +  ++  M      P++ S+ +L+ G+ L 
Sbjct: 436 FEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLT 495

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR  EA+ L + M+  G  P+   Y+TL+HG C    +D+A S+  +M      P V TY
Sbjct: 496 GRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTY 555

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++ G  + G    A +++  MI+N    ++  YT ++  LC+NN   +A  + + +  
Sbjct: 556 NTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCS 615

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           ++   +  T N  I  L   GR + AM L   +  Y  +P++ TY  + + L++   ++E
Sbjct: 616 KDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEE 675

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
             EL + +E+ G   N    N ++  +   G +  A   L K+  +   L+A T +++I 
Sbjct: 676 LDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLIS 735

Query: 489 AYCKQGKVNNAIQLLDRIR 507
            Y +      A  L ++ R
Sbjct: 736 IYSRAEYQQLAKSLPEKYR 754



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 5/373 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D       QM  EGV+    VF S++     V   E+A K+F+ + + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++     +N ++  L  E R      +   M R  + P+V +YN L+   C   R+D A 
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KLL  M + G  PD  +Y T++   CK  ++++A    RE+ M+    GV  YN +++GL
Sbjct: 503 KLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGL 562

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  +  EA  L   M++     ++ TY+ I++ LC    V+ +  +   +  +    +I
Sbjct: 563 FQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDI 622

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +   ++   L GGR  +A DL+  +   G +P+V  Y  +   L   GS++E   +   
Sbjct: 623 FTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSA 682

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEEN   PN    +AL+      G++  A    +++     S      + ++ +  +   
Sbjct: 683 MEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEY 742

Query: 356 FHQAHSLIEKMAF 368
              A SL EK  F
Sbjct: 743 QQLAKSLPEKYRF 755



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 45/219 (20%)

Query: 391 VDWAMKLLDQMKQY-------------------------------------EC----LPN 409
           +D A+KL D+M  Y                                     EC     P+
Sbjct: 32  LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLL 468
             TY  L+    R+ R+K  F     I K G  L N V +  +L G+C A  V EA  +L
Sbjct: 92  SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151

Query: 469 GKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNPDIISYTSLLWG 525
            + + E G  L+ I++NI++   C + +   A++L+  +   G G   P++++YT+++ G
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +C +  +  A    Q M+++G+ PN  T+  L+    S 
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLST 250


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 277/563 (49%), Gaps = 53/563 (9%)

Query: 46  AEQALKM-FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG---MEPNVF 101
            + A+ M F R+ E G  P V  YN ++  L  E +      +  +M  DG     PNV 
Sbjct: 142 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVV 201

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMR 160
           +YN ++    K   VD AY L  EM  +G  PD V+Y +++  +CK   +++A   L   
Sbjct: 202 SYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM 261

Query: 161 FGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           F  GV      YN +I G C   ++EEA  LL +M   G+ P+V+TYS +I   C +G  
Sbjct: 262 FDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRC 321

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +   M  +G  PN   +  LL GY   G   +  DL + MIR+G      A++ L
Sbjct: 322 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I     +G++D+A++   +M +N   P+V +YS +I    K G +  A   +N+M+S G 
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE--------------------------- 369
           SPN++++T ++  LC    + +    +E++AFE                           
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKK----VEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497

Query: 370 ------------NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
                          P+ V++NT I G C  G++D ++K LD+M      P+  TYN LL
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G  +  RV++A  L  E+ +  ++   +T N +LHG+ +AG +V A +L  KM+  GT+
Sbjct: 558 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQ 617

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           L   T+N ++   C+   V+ A+++ + +R   E+  D+ +++ ++  +   G + EA  
Sbjct: 618 LRIETYNTVLGGLCENSCVDEALRMFEDLR-SKEFELDVRTFSIVINALLKVGRIDEAKS 676

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
               M+  G  P+  T++++++S
Sbjct: 677 LFSAMVLRGPVPDVITYSLMIKS 699



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 144/470 (30%), Positives = 239/470 (50%), Gaps = 10/470 (2%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           T N L+K LC  NR D A  ++   M   G  PD  SY  ++  +C   + +EA EL + 
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187

Query: 161 FGSG--------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             +         V  YN +I+G  KE ++++A++L  EM+ +G+ P+V+TY+++I  LC 
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              ++ ++ IL  MF +G  P+  ++  +++GY   G+  EA  L  +M   G  P+VV 
Sbjct: 248 AQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 307

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS LI   C  G   EA SV   M      PN T Y  L+ G+A  G L+    + + MI
Sbjct: 308 YSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 367

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G      A+  ++    ++    +A +   +M      P+ V+++T I  LC  GRV+
Sbjct: 368 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVE 427

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+   +QM      PNI ++  L+ GL  +   K+  EL  E+   GI  + +  NTI+
Sbjct: 428 DAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM 487

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C+ G VVEA      ++  G K D +++N +I  YC  GK++ +I+ LDR+   G  
Sbjct: 488 DNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIG-L 546

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            PD  +Y SLL G   +G +++A    ++M  + +     T N+++  LF
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLF 596



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 274/594 (46%), Gaps = 43/594 (7%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           EK   + ++ L+      G +CS  V  + +VI+ + + G  ++A  +F+ +   GL P 
Sbjct: 175 EKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPD 234

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN ++D L           I  +M   G+ P+  TYNI+++  C   +++ A +LL 
Sbjct: 235 VVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLK 294

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS------------GVSVYN 169
           +M   G  PD V+Y+ ++   CK+G+  EAR +    +R G             G +   
Sbjct: 295 KMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 354

Query: 170 ALI-----------NGLCKEHK--------------IEEAFWLLCEMVDRGIDPNVITYS 204
           ALI           +G+  EH+              +++A     EM   G+ P+V++YS
Sbjct: 355 ALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 414

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I  LC  G VE ++    QM   G +PNI SFTSL+ G    G   +  +L   MI  
Sbjct: 415 TVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR 474

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+ +  +T++  LC  G + EA      +      P+V +Y+ LIDG+   G +  +
Sbjct: 475 GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDES 534

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +  +RM+S G  P+   Y  ++    +N     A +L  +M  ++     +T N  + G
Sbjct: 535 IKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHG 594

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   GR+  A +L  +M        I TYN +L GL   + V EA  +  ++     +L+
Sbjct: 595 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 654

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           + T++ +++ + + G + EA  L   M++ G   D IT++++I ++ ++G +  +  L  
Sbjct: 655 VRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFL 714

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +   G    D      ++  +   G ++ A  YL K+  +      +T  +L+
Sbjct: 715 SMEKNG-CAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLI 767



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 205/407 (50%), Gaps = 5/407 (1%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F S ++V     +     H    A  L   MV  G++        +I   C VG ++ + 
Sbjct: 52  FNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAF 111

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRMIREGFLPNVVAYSTLIHG 279
                    G      +   L+KG   G RT +A D+ + RM   G+ P+V +Y+ LI G
Sbjct: 112 AAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKG 171

Query: 280 LCSNGSMDEAVSVSYQMEEN---SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           LC      EA+ +   M  +   +C PNV +Y+ +IDGF K G +  A  +++ M+  G 
Sbjct: 172 LCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGL 231

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV Y  ++  LC+     +A ++++ M  +   P+T T+N  I+G C  G+++ A++
Sbjct: 232 PPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +M      P++ TY+ L+    ++ R  EA  +   + + G + N   Y+ +LHG  
Sbjct: 292 LLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYA 351

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
             G +++   LL  M+ +G   +   FNI+I AY K G V+ A+     +R  G   PD+
Sbjct: 352 TKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNG-LRPDV 410

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           +SY++++  +C +G +++A  +  +M++EG+ PN  ++  L+  L S
Sbjct: 411 VSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 457



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 174/363 (47%), Gaps = 9/363 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++   Y   QM  EG+S +   F S+I+    +G  ++  ++ + +   G+ P     N
Sbjct: 425 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMN 484

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+D L  E R       +  +   G++P+V +YN L+   C   ++D + K L  M + 
Sbjct: 485 TIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSI 544

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----REL---AMRFGSGVSVYNALINGLCKEHKIE 182
           G  PD+ +Y ++++   K G+VE+A    RE+    ++F +  S  N +++GL +  +I 
Sbjct: 545 GLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITS--NIMLHGLFQAGRIV 602

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  L  +MVDRG    + TY+T++  LC+   V+ +L +   +  +    ++ +F+ ++
Sbjct: 603 AARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVI 662

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
              L  GR  EA  L++ M+  G +P+V+ YS +I      G ++E+ ++   ME+N C 
Sbjct: 663 NALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCA 722

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +    + ++    + G++  A     ++     S        ++ ++ +     +   L
Sbjct: 723 ADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEKKYQKEVKFL 782

Query: 363 IEK 365
            EK
Sbjct: 783 PEK 785


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 245/460 (53%), Gaps = 12/460 (2%)

Query: 28  CSEGVFISVINSYRRV---GLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           C    +I   ++YR++   GL      +AL +F R+      P++  +  +L  +    R
Sbjct: 38  CGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKR 97

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           F ++  ++  M+  G+ P ++T NI++  +C++++   A   L +M   G  PD V++T+
Sbjct: 98  FDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTS 157

Query: 141 IVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++   C   ++E+A  L      M F   V  Y  LI+ LCK   +  A  +  +M D G
Sbjct: 158 LLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG 217

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I PNV+TY++++S LC++G    +  +L  M  RG  PN+ +FT+L+  ++  G+  EA 
Sbjct: 218 IRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAK 277

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L+  MI+    P+V  Y+ LI+GLC+ G +DEA  + Y ME N   PN  TY+ LI GF
Sbjct: 278 ELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGF 337

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K+  +   ++I+  M   G   N + YT +++  C       A  +  +M     PP+ 
Sbjct: 338 CKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDI 397

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T+N  + GLC  G V+ A+ +   M++ E   NI TY  ++ G+ +V +V++AF+L   
Sbjct: 398 RTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCS 457

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +   G++ N++TY T++ G CR G + EA  L  KM  +G
Sbjct: 458 LFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDG 497



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 220/453 (48%), Gaps = 6/453 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-- 160
           Y  +L+    N + + A  L   M +    P  V +T ++S I K+ + +    L  +  
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 161 -FGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
             G    +Y  N ++N +C+  +   A   L +M+  G +P+++T+++++   C    +E
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  Q+   G  PN+ ++T+L+         + A +++N+M   G  PNVV Y++L+
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLC  G   +A  +   M +    PNV T++ALID F K G ++ A +++  MI     
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+V  YT ++  LC      +A  +   M      PN VT+ T I G C   RV+   K+
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKI 349

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M Q   + N  TY  L+ G   V R   A E+  ++       +I TYN +L G+C 
Sbjct: 350 FYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G V +A  +   M      ++ +T+ III   CK GKV +A  L   +   G   P++I
Sbjct: 410 NGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKG-MKPNVI 468

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           +YT+++ G C  G + EA    +KM  +G  PN
Sbjct: 469 TYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 208/416 (50%), Gaps = 8/416 (1%)

Query: 34  ISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           +SVI   +R  +    + +F +++  G+ P +   N +++ +   ++    +     M +
Sbjct: 89  LSVIAKMKRFDVV---ISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMK 145

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            G EP++ T+  LL   C  NR++ A  L  ++   G  P+ V+YTT++  +CK   +  
Sbjct: 146 LGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNH 205

Query: 154 ARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A E+  + G       V  YN+L++GLC+  +  +A WLL +M+ RGI PNVIT++ +I 
Sbjct: 206 AVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALID 265

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           +   VG +  +  +   M      P++ ++T+L+ G    GR  EA  ++  M   G+ P
Sbjct: 266 AFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           N V Y+TLIHG C +  +++   + Y+M +     N  TY+ LI G+   G    A +++
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           N+M S    P++  Y  ++  LC N    +A  + + M       N VT+   I+G+C  
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           G+V+ A  L   +      PN+ TY  ++ G  R   + EA  L  ++++ G   N
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 200/391 (51%), Gaps = 1/391 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +  L++ + K  + +    L  +M   GI P + T + +++ +C       +   LG+M 
Sbjct: 85  FTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMM 144

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P++ +FTSLL G+    R  +A  L+++++  GF PNVV Y+TLIH LC N  ++
Sbjct: 145 KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLN 204

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            AV +  QM +N   PNV TY++L+ G  + G    A+ +   M+  G  PNV+ +T ++
Sbjct: 205 HAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALI 264

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
               +     +A  L + M   +  P+  T+   I GLC  GR+D A ++   M+     
Sbjct: 265 DAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYY 324

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN  TY  L+ G  +  RV++  ++  E+ + G+  N +TY  ++ G C  G    A ++
Sbjct: 325 PNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEV 384

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M       D  T+N+++   C  G V  A+ +   +R   E + +I++YT ++ G+C
Sbjct: 385 FNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKR-EMDINIVTYTIIIQGMC 443

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             G +++AF     + ++G+ PN  T+  ++
Sbjct: 444 KVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 200/391 (51%), Gaps = 2/391 (0%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L NGL    +  EA  L   MV     P+++ ++ ++S +  +   +  + +  QM + G
Sbjct: 54  LRNGL-HNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILG 112

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            +P +++   ++       +   AS    +M++ GF P++V +++L+HG C    +++A+
Sbjct: 113 ISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDAL 172

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           ++  Q+      PNV TY+ LI    K  +L  A +I+N+M  NG  PNVV Y  +V  L
Sbjct: 173 ALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGL 232

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+   +  A  L+  M      PN +TF   I      G++  A +L   M Q    P++
Sbjct: 233 CEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDV 292

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  L++GL    R+ EA ++   +E  G   N VTY T++HG C++  V +  ++  +
Sbjct: 293 FTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYE 352

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M  +G   + IT+ ++I  YC  G+ + A ++ +++ G     PDI +Y  LL G+C +G
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM-GSRRAPPDIRTYNVLLDGLCYNG 411

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +++A +  + M    +  N  T+ ++++ +
Sbjct: 412 YVEKALMIFKYMRKREMDINIVTYTIIIQGM 442



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 143/269 (53%), Gaps = 8/269 (2%)

Query: 9   CEI---DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           CEI       +LL+ M   G+  +   F ++I+++ +VG   +A +++  + +  + P V
Sbjct: 233 CEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDV 292

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y  +++ L    R      ++  M+ +G  PN  TY  L+   CK+ RV+   K+  E
Sbjct: 293 FTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYE 352

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHK 180
           M  KG   + ++YT ++   C +G+ + A+E+  + GS      +  YN L++GLC    
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGY 412

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E+A  +   M  R +D N++TY+ II  +C VG VE +  +   +F +G  PN+ ++T+
Sbjct: 413 VEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTT 472

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           ++ G+   G  HEA  L+ +M  +GFLPN
Sbjct: 473 MISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 170/363 (46%), Gaps = 36/363 (9%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  +L+  L   + +EA DL+ RM+    LP++V ++ L+  +      D  +S+  QM
Sbjct: 49  NYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM 108

Query: 297 E-------------------ENSCP----------------PNVTTYSALIDGFAKAGNL 321
           +                    +S P                P++ T+++L+ GF     +
Sbjct: 109 QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRI 168

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  ++++++  G  PNVV YT ++  LC+N   + A  +  +M      PN VT+N+ 
Sbjct: 169 EDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSL 228

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GLC  GR   A  LL  M +    PN+ T+  L+D  ++V ++ EA EL   + +  +
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSV 288

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ TY  +++G+C  G + EA Q+   M   G   + +T+  +I+ +CK  +V +  +
Sbjct: 289 YPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTK 348

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   +   G    + I+YT L+ G C  G    A     +M +    P+  T+NVL+  L
Sbjct: 349 IFYEMSQKG-LVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407

Query: 562 FSN 564
             N
Sbjct: 408 CYN 410



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 145/293 (49%), Gaps = 5/293 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  QM   G+  +   + S+++    +G    A  +   + + G++P V  +  ++DA +
Sbjct: 209 IFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFV 268

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +Y  M +  + P+VFTY  L+  LC   R+D A ++   M + G  P+ V
Sbjct: 269 KVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEV 328

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT++   CK  +VE+  ++          +    Y  LI G C   + + A  +  +M
Sbjct: 329 TYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM 388

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             R   P++ TY+ ++  LC  G VE +L I   M  R  + NI ++T +++G    G+ 
Sbjct: 389 GSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKV 448

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            +A DL+  +  +G  PNV+ Y+T+I G C  G + EA ++  +M+E+   PN
Sbjct: 449 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/507 (30%), Positives = 271/507 (53%), Gaps = 15/507 (2%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F+R+      P +  +N ILD+      +  +  +   ++   ++P+ FT NIL
Sbjct: 45  DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           +   C   +++ A+ +L ++   G  PD V+ TT++  +C  GQV++A     + LA  F
Sbjct: 105 INCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGF 164

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y  LING+CK  +   A  LL  +  R  +PNV+ Y+TII  LC    V  +  
Sbjct: 165 RLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACN 224

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M V+G + N+ ++++++ G+ + G+  EA    N M+ +   P+V  Y+TL+  L 
Sbjct: 225 LFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALH 284

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA +V   + +    PNV TY+ LIDG+AK         ++N +   G +P+V 
Sbjct: 285 KEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMGVTPDVW 336

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  M+  LC+     +A +L ++M  +N  PNTVT+N+ I GLC  GR+ +A  L+D+M
Sbjct: 337 SYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM 396

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG-VCRAGM 460
                  N+ TYN L++GL +  ++ +A  L+ +++  GIQ ++ T N +LHG +C+   
Sbjct: 397 HDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKR 456

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           +  A  L   +L +G   +  T+NIIIY +CK+G ++ A  L  ++   G  +P+ I++ 
Sbjct: 457 LKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSG-CSPNAITFK 515

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGI 547
            ++  +   G   +A   L +M+  G+
Sbjct: 516 IIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/464 (28%), Positives = 220/464 (47%), Gaps = 34/464 (7%)

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFW 186
            P  + +  I+ S  K+        L+ R             N LIN  C   +I  AF 
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +L +++  G  P+ +T +T+I  LC  G V+ +L    ++  +G   +  S+ +L+ G  
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T  A  L  R+      PNVV Y+T+I  LC    + EA ++  +M       NV 
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TYSA+I GF   G L  A    N M+    +P+V  Y  +V  L +     +A +++  +
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299

Query: 367 AFENCPPNTVTFNTFIKG---------------------------LCGCGRVDWAMKLLD 399
                 PN +T+NT I G                           LC   RV+ A+ L  
Sbjct: 300 VKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYK 359

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M Q   +PN  TYN L+DGL +  R+  A++L+ E+   G   N++TYN++++G+C+ G
Sbjct: 360 EMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNG 419

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYA-YCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            + +A  L+ KM  +G + D  T NI+++   CK  ++ NA  L   +   G ++P++ +
Sbjct: 420 QLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKG-YHPNVYT 478

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           Y  +++G C  G + EA+    KM + G  PN  T+ +++ +L 
Sbjct: 479 YNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALL 522



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 228/476 (47%), Gaps = 33/476 (6%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++S+ ++      + +  R+    ++P     N +++      + ++   + S + 
Sbjct: 66  FNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKIL 125

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+  T   L+K LC   +V  A     ++  +G   D VSY T+++ +CK+G+  
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETR 185

Query: 153 EARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L  R         V +YN +I+ LCK   + EA  L  EM  +GI  NV+TYS II
Sbjct: 186 AAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII 245

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C VG +  +LG L +M ++  NP+++ + +L+      G+  EA ++   +++    
Sbjct: 246 HGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLK 305

Query: 268 PNVVAYSTLIHG---------------------------LCSNGSMDEAVSVSYQMEENS 300
           PNV+ Y+TLI G                           LC    ++EA+++  +M + +
Sbjct: 306 PNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKN 365

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN  TY++LIDG  K+G +  A  + + M   G   NV+ Y  ++  LC+N    +A 
Sbjct: 366 MVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAI 425

Query: 361 SLIEKMAFENCPPNTVTFNTFIKG-LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           +LI KM  +   P+  T N  + G LC   R+  A  L   +      PN+ TYN ++ G
Sbjct: 426 ALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYG 485

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
             +   + EA+ L +++E  G   N +T+  I+  +   G   +A +LL +M+  G
Sbjct: 486 HCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARG 541



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 200/407 (49%), Gaps = 14/407 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K ++    +   ++  +G    +  + ++IN   ++G    A+++  RI    
Sbjct: 139 LIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRL 198

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V +YN I+D L      S    ++S M   G+  NV TY+ ++   C   ++  A 
Sbjct: 199 TEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEAL 258

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
             L EM  K   PD   Y T+V ++ K G+V+EA+ +            V  YN LI+G 
Sbjct: 259 GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY 318

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   +  A  L+      G+ P+V +Y+ +I+ LC +  VE +L +  +M  +   PN 
Sbjct: 319 AKH--VFNAVGLM------GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNT 370

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G    GR   A DL + M   G   NV+ Y++LI+GLC NG +D+A+++  +
Sbjct: 371 VTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINK 430

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQ-IWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           M++    P++ T + L+ G    G  L  +Q ++  ++  G  PNV  Y  ++   C+  
Sbjct: 431 MKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEG 490

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +  +A++L  KM    C PN +TF   I  L   G  D A KLL +M
Sbjct: 491 LLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEM 537



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 172/325 (52%), Gaps = 14/325 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M V+G+S +   + ++I+ +  VG   +AL     +    + P V IYN ++DAL 
Sbjct: 225 LFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALH 284

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      + + + +  ++PNV TYN L+    K+        +   +G  G  PD  
Sbjct: 285 KEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVW 336

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  +++ +CK+ +VEEA  L               YN+LI+GLCK  +I  A+ L+ EM
Sbjct: 337 SYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM 396

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG-R 250
            DRG   NVITY+++I+ LC  G ++ ++ ++ +M  +G  P++++   LL G L  G R
Sbjct: 397 HDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKR 456

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A  L+  ++ +G+ PNV  Y+ +I+G C  G +DEA ++  +ME++ C PN  T+  
Sbjct: 457 LKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKI 516

Query: 311 LIDGFAKAGNLLGASQIWNRMISNG 335
           +I    + G    A ++   MI+ G
Sbjct: 517 IICALLEKGETDKAEKLLCEMIARG 541



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 201/409 (49%), Gaps = 28/409 (6%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A +    M+     P +I ++ I+ S   + +  T + +  ++ ++   P+  +   
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  +   G+ + A  + +++++ G+ P+ V  +TLI GLC  G + +A+    ++    
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              +  +Y  LI+G  K G    A Q+  R+      PNVV Y  ++  LC+  +  +A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L  +M+ +    N VT++  I G C  G++  A+  L++M      P++  YN L+D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG-------------------------- 454
            +  +VKEA  ++  I K  ++ N++TYNT++ G                          
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMIN 343

Query: 455 -VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +C+   V EA  L  +M  +    + +T+N +I   CK G+++ A  L+D +   G  +
Sbjct: 344 RLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGH-H 402

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++I+Y SL+ G+C +G + +A   + KM ++GI P+  T N+L+  L 
Sbjct: 403 ANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLL 451



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 145/312 (46%), Gaps = 8/312 (2%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC---PPNVTTYSALIDGFAKAGNL 321
            FLPN        H      S +      +Q     C    P +  ++ ++D FAK  + 
Sbjct: 20  SFLPNPSLPKLHSHFHSRPPSFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHY 79

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
                +  R+      P+      ++   C     + A S++ K+      P+TVT  T 
Sbjct: 80  PTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTL 139

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           IKGLC  G+V  A+   D++       +  +Y  L++G+ ++   + A +L+  I+    
Sbjct: 140 IKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLT 199

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+V YNTI+  +C+  +V EA  L  +M ++G   + +T++ II+ +C  GK+  A+ 
Sbjct: 200 EPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALG 259

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV--- 558
            L+ +      NPD+  Y +L+  +   G ++EA   L  ++   + PN  T+N L+   
Sbjct: 260 FLNEMVLKA-INPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY 318

Query: 559 -RSLFSNLGHLG 569
            + +F+ +G +G
Sbjct: 319 AKHVFNAVGLMG 330



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 6/225 (2%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A  +F  +   G+ P V  YN +++ L    R      +Y  M +  M PN  TYN L+ 
Sbjct: 319 AKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLID 378

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGV 165
            LCK+ R+  A+ L+ EM ++G   + ++Y ++++ +CK GQ+++A  L  +    G   
Sbjct: 379 GLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQP 438

Query: 166 SVY--NALING-LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
            +Y  N L++G LCK  +++ A  L  +++D+G  PNV TY+ II   C  G ++ +  +
Sbjct: 439 DMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYAL 498

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             +M   GC+PN  +F  ++   L  G T +A  L   MI  G L
Sbjct: 499 QSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 272/523 (52%), Gaps = 6/523 (1%)

Query: 53  FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           F RI      P +  +  IL +L+  N +     ++  M+ +G+  ++ T+NIL+    +
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSV 167
                 ++ +   +  KG  P+A++ TT++  +C  GQ+ +A     + +A+ F      
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVC 163

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y  LINGLCK  +   A  LL  +  + + PNV+ Y+TII S+C V  V  +  +  +M 
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +G +P++ ++++L+ G+ + G+ ++A  L+N+MI E   P+V  +S L+ G C  G + 
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA +V   M +    P+V TY +L+DG+     +  A  I+N M   G + NV +Y  M+
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+     +A +L ++M  +N  P+ VT+N+ I GLC  G++ +A+KL+D+M      
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            +  TYN +LD L + ++V +A  L+T+++  GIQ ++ TY  ++ G+C+ G + +A  +
Sbjct: 404 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNI 463

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              +L++G  +   T+ ++I  +C     + A+ LL ++   G   P+  +Y  ++  + 
Sbjct: 464 FEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG-CIPNAKTYEIIILSLF 522

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGP 570
                  A   L++M+  G+   +     L    F    +L P
Sbjct: 523 EKDENDMAEKLLREMIARGLLFGWKKAYCLFTRFFQRRSNLYP 565



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 250/485 (51%), Gaps = 9/485 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL--LAENRFSMINPIYSN 90
           F  ++ S  ++   + A+ +   +   G+   +  +N +++    L    FS    +++N
Sbjct: 59  FGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSF--SVFAN 116

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           + + G EPN  T   L+K LC   ++  A     ++   G   + V Y T+++ +CK+GQ
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176

Query: 151 VEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
              A +L  R         V +YN +I+ +CK   + EAF L  EMV +GI P+V+TYS 
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS  C +G +  ++G+  +M     NP++++F+ L+ G+   GR  EA ++   M+++G
Sbjct: 237 LISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQG 296

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV Y +L+ G C    +++A S+   M +     NV +Y+ +I+GF K   +  A 
Sbjct: 297 IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAM 356

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            ++  M      P+VV Y  ++  LC++     A  L+++M     P + +T+N+ +  L
Sbjct: 357 NLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDAL 416

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   +VD A+ LL +MK     P++ TY  L+DGL +  R+K+A  +  ++   G  + +
Sbjct: 417 CKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITV 476

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TY  ++ G C   +  +A  LL KM   G   +A T+ III +  ++ + + A +LL  
Sbjct: 477 YTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLRE 536

Query: 506 IRGGG 510
           +   G
Sbjct: 537 MIARG 541



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 207/406 (50%), Gaps = 5/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K +I    +   ++   G   ++  + ++IN   +VG    AL++  R+    
Sbjct: 132 LIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKL 191

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V +YN I+D++      +    +YS M   G+ P+V TY+ L+   C   +++ A 
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI 251

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            L  +M ++   PD  +++ +V   CK G+V+EA+  LAM    G+      Y +L++G 
Sbjct: 252 GLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGY 311

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ +A  +   M   G+  NV +Y+ +I+  C +  V+ ++ +  +M  +   P++
Sbjct: 312 CLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDV 371

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G    G+   A  L + M   G   + + Y++++  LC N  +D+A+++  +
Sbjct: 372 VTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++    P++ TY+ LIDG  K G L  A  I+  ++  G +  V  YT M++  C N++
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           F +A +L+ KM    C PN  T+   I  L      D A KLL +M
Sbjct: 492 FDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 155/307 (50%), Gaps = 1/307 (0%)

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H     +NR++     P +  +  ++  L        A+S+  +ME N    ++ T++ L
Sbjct: 38  HSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNIL 97

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ F++ G+   +  ++  ++  G  PN +  T ++K LC     HQA    +K+     
Sbjct: 98  INCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGF 157

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             N V + T I GLC  G+   A++LL ++      PN+  YN ++D + +V  V EAF+
Sbjct: 158 HLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L +E+   GI  ++VTY+ ++ G C  G + +A  L  KM+ E    D  TF+I++  +C
Sbjct: 218 LYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFC 277

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+G+V  A  +L  +   G   PD+++Y SL+ G C    + +A      M   G+  N 
Sbjct: 278 KEGRVKEAKNVLAMMMKQG-IKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336

Query: 552 ATWNVLV 558
            ++N+++
Sbjct: 337 QSYNIMI 343



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +   M   GV+ +   +  +IN + ++   ++A+ +F  +    + P V  YN
Sbjct: 316 QVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYN 375

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    + S    +   M   G+  +  TYN +L ALCKN++VD A  LL +M ++
Sbjct: 376 SLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 435

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +YT ++  +CK G++++A+      L   +   V  Y  +I G C     ++A
Sbjct: 436 GIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKA 495

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             LL +M D G  PN  TY  II SL +    + +  +L +M  RG
Sbjct: 496 LALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 148/467 (31%), Positives = 244/467 (52%), Gaps = 6/467 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           E N +T NI++   CK    D    ++ EM  +   PD V++  +V +  + G  E A  
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212

Query: 157 LAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L     S     G+  YN+++ GLC+    ++A+ +  EM D G+ P+V +++ +I   C
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            VG +E +L I  +M  RG  P++ SF+ L+  +   G+   A      M   G +P+ V
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ +I G C  G M +A+ V  +M    C P+V TY+ L++G  K   LL A  + N M
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G  P++  +T ++   C      +A  L + M  +   P+ VT+NT I G+C  G +
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A  L D M   E  PN  TY+ L+D      +V++AF  + E+   GI  NI+TYN+I
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G CR+G V +  + L KM++     D IT+N +I+ Y K+ K+++A +LL+ +    +
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME-KEK 571

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             PD+++Y  L+ G    G +QEA    +KM  +GI P+  T+  ++
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 238/458 (51%), Gaps = 6/458 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  +N ++DA            +  +M   G++P + TYN +LK LC++   D A+++
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 248

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCK 177
             EM + G APD  S+T ++   C++G++EEA    +E+  R     +  ++ LI    +
Sbjct: 249 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 308

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             K++ A   L EM   G+ P+ + Y+ +I   C  G +  +L +  +M   GC P++ +
Sbjct: 309 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 368

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +LL G     R  +A  L N M   G  P++  ++TLIHG C  G +D+A+ +   M 
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P++ TY+ LIDG  + G+L  A+ +W+ M S    PN V Y+ ++   C+     
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A   +++M  +   PN +T+N+ IKG C  G V    K L +M   +  P++ TYN L+
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            G ++ +++ +AF+L+  +EK  +Q ++VTYN +++G    G V EA  +  KM  +G +
Sbjct: 549 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 608

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            D  T+  +I  +   G    A QL D +   G + PD
Sbjct: 609 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG-FAPD 645



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 252/486 (51%), Gaps = 9/486 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+    +  E D V  ++ +M+   V         ++++  R G AE A+ +   +   G
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN +L  L     +     ++  M   G+ P+V ++ IL+   C+   ++ A 
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFG---SGVSVYNALIN 173
           K+  EM ++G  PD VS++ ++    + G+++ A    RE+   FG    GV +Y  +I 
Sbjct: 282 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC-FGLVPDGV-IYTMVIG 339

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G C+   + +A  +  EMV  G  P+V+TY+T+++ LC    +  + G+L +M  RG  P
Sbjct: 340 GFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPP 399

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ +FT+L+ GY + G+  +A  L++ M+ +   P++V Y+TLI G+C  G +D+A  + 
Sbjct: 400 DLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M      PN  TYS LID   + G +  A    + MI+ G  PN++ Y  ++K  C++
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 519

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +    ++KM      P+ +T+NT I G     ++  A KLL+ M++ +  P++ TY
Sbjct: 520 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 579

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L++G      V+EA  +  ++   GI+ +  TY ++++G   AG   EAFQL  +ML 
Sbjct: 580 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 639

Query: 474 EGTKLD 479
            G   D
Sbjct: 640 RGFAPD 645



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 195/361 (54%), Gaps = 1/361 (0%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  T + ++ + C     +    ++ +M  R   P++ +   ++      G    A  L 
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           + M+ +G  P +V Y++++ GLC +G  D+A  V  +M++    P+V +++ LI GF + 
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A +I+  M   G  P++V+++C++ +  +      A + + +M      P+ V +
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I G C  G +  A+++ D+M    CLP++ TYN LL+GL +  R+ +A  L+ E+ +
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  ++ T+ T++HG C  G + +A QL   ML +  + D +T+N +I   C+QG ++ 
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A  L D +    E  P+ ++Y+ L+   C  G +++AF +L +M+N+GI PN  T+N ++
Sbjct: 455 ANDLWDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513

Query: 559 R 559
           +
Sbjct: 514 K 514



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 37/369 (10%)

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G  H A+D +  +       N    + ++H  C     D+  +V  +ME+    P+V T
Sbjct: 134 AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 193

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ ++D   +AG+   A  + + M+S G  P +V Y  ++K LC++ M+ +A  + ++M 
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 253

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ---------YECL----------- 407
                P+  +F   I G C  G ++ A+K+  +M+          + CL           
Sbjct: 254 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313

Query: 408 ---------------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                          P+   Y  ++ G  R   + +A  +  E+  CG   ++VTYNT+L
Sbjct: 314 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 373

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G+C+   +++A  LL +M   G   D  TF  +I+ YC +GK++ A+QL D +      
Sbjct: 374 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ-RL 432

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            PDI++Y +L+ G+C  G + +A      M +  I PN  T+++L+ S     G +   +
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS-HCEKGQVEDAF 491

Query: 573 ILDDIMANK 581
              D M NK
Sbjct: 492 GFLDEMINK 500



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 165/351 (47%), Gaps = 4/351 (1%)

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P    F  L++ Y    +  EA + + R+I +  +P   A S  +    S        +
Sbjct: 83  TPQPRVFDLLIRTYTQSRKPREAFEAF-RLILDHRVPIPAAASNALLAALSRAGWPHLAA 141

Query: 292 VSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +Y++  +S    N  T + ++  + KA        + + M      P+VV +  MV   
Sbjct: 142 DAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDAR 201

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +      A +L++ M  +   P  VT+N+ +KGLC  G  D A ++  +M  +   P++
Sbjct: 202 FRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 261

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            ++  L+ G  RV  ++EA ++  E+   GI+ ++V+++ ++    R G +  A   L +
Sbjct: 262 RSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLRE 321

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G   D + + ++I  +C+ G +++A+++ D + G G   PD+++Y +LL G+C   
Sbjct: 322 MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL-PDVVTYNTLLNGLCKER 380

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            + +A   L +M   G+ P+  T+  L+   +   G L     L D M N+
Sbjct: 381 RLLDAEGLLNEMRERGVPPDLCTFTTLIHG-YCIEGKLDKALQLFDTMLNQ 430


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 164/627 (26%), Positives = 292/627 (46%), Gaps = 87/627 (13%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYNHILDALLAENRFSMINPI 87
           SE   + V++++ R  + + AL  F  +    G  P ++ +N +LDA +   RFS  +  
Sbjct: 82  SESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAF 141

Query: 88  YSNMKRDG----MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           ++++        + PN+ TYNI+L++LC    +D A  L   +  +  APD ++Y+T++ 
Sbjct: 142 FASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMC 201

Query: 144 SICKLGQVEEARELAMR--------------------FGSG------------------- 164
            + K  +++ A +L                       F +G                   
Sbjct: 202 GLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGAR 261

Query: 165 --VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             ++ YN +++GLCK  + +E   +   MV   + P+VITY  +I  LC  G+V+ +  +
Sbjct: 262 PNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARV 321

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW--------------NRMIREGF-- 266
             ++   G   +   + SL+KG+   GR  EA   W              N MI+  F  
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDS 381

Query: 267 -------------------LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                              +P+ V + TLIHGLC NG  ++A ++  +   +    +V +
Sbjct: 382 GMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           YS++I+G    G L+ A +++ +M  +GC PN   Y  ++   CQ      A  +  KMA
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
              C P  +T+NT I GLC   +   A  +  +M +    P+ITTY  L+ GL    ++ 
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-KLDAITFNII 486
           +A  +  +I   G++++++ +N ++HG+C AG V EA  +   M  +     + +T+N +
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +    + G ++ A  L   I   G   PDIISY + + G+C+   + E    L ++L+ G
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDG-LEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYI 573
           I P   TWN+LVR++       GP+ +
Sbjct: 681 IIPTVITWNILVRAVIK----YGPIQV 703



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 257/501 (51%), Gaps = 9/501 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFGLKP 63
           L ++  +D    LL +M    V      + +++    + G  E+ ++++ + +++ G +P
Sbjct: 203 LAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARP 262

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            +  YN +LD L    RF  +  ++  M  + ++P+V TY IL+  LC++  VDGA ++ 
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG----SGVSVYNALINGLCKEH 179
            E+   G   DA  Y ++V   C+ G+V+EA +     G      +  YN +I GL    
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSG 382

Query: 180 KIEEA--FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            ++EA   W L E  D    P+ +T+ T+I  LC  G    +  I  +  V G   ++ S
Sbjct: 383 MVDEAIELWDLLEK-DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFS 441

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           ++S++ G    GR  +A  ++ +M ++G  PN   Y+ LI G C      +AV +  +M 
Sbjct: 442 YSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMA 501

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +N C P V TY+ LIDG  KA     AS +   M+ NG +P++  Y  +++ L  +    
Sbjct: 502 DNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKID 561

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNEL 416
            A S+ +++ ++    + +  N  I GLC  G+VD A+ +   MK+ + C PN+ TYN L
Sbjct: 562 DALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTL 621

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL     + +A  L T I + G++ +I++YNT + G+C    + E  QLL ++L  G 
Sbjct: 622 MDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGI 681

Query: 477 KLDAITFNIIIYAYCKQGKVN 497
               IT+NI++ A  K G + 
Sbjct: 682 IPTVITWNILVRAVIKYGPIQ 702


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 270/491 (54%), Gaps = 6/491 (1%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP++  +  IL +L+  N +S +  ++  M+ +G+  ++   +IL+    +  +   ++ 
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLC 176
           +L ++   G  P+ ++ TT++  +C  GQ+ +A     + +A+ F      Y  LINGLC
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  +   A  LL  +  + + PNV+ Y+TII S+C V  V  +  +  +M  +G +P++ 
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ +L+ G+ + G+  +A+DL+N+MI E   PNV  ++ L+ G C    + EA +V   M
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +    P+V TY++L+D +     +  A  I+N +   G +PN+ +Y+ M+   C+    
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A +L ++M   N  P+ VT+N+ I GLC  G++ +A+KL+D+M       +  TYN +
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           LD L + ++V +A  L+T+++  GIQ +I TY T++ G+C+ G + +A  +   +L++G 
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY 488

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            LD   +  +I  +C  G  + ++ LL ++   G   P+ ++Y  ++  + +     +A 
Sbjct: 489 ILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG-CIPNAVTYEIIICSLFDKDENDKAE 547

Query: 537 IYLQKMLNEGI 547
             L++M+  G+
Sbjct: 548 KLLREMITRGL 558



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 210/424 (49%), Gaps = 8/424 (1%)

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +VSS  +L   +  +    +FG        ++  L K +       L  +M   GI  ++
Sbjct: 55  LVSSFNRLLHQKNPKPSIFQFGK-------ILGSLVKSNHYSTVVSLHRQMEFNGITSDL 107

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +  S +I+    +G    S  +L ++   G  PN+ + T+L+KG  L G+ H+A    ++
Sbjct: 108 VILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDK 167

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           ++  GF  N V+Y TLI+GLC  G    A+ +  +++     PNV  Y+ +ID   K   
Sbjct: 168 VVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKL 227

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  +++ M+S G SP+VV Y  ++   C       A  L  KM FEN  PN  TFN 
Sbjct: 228 VNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNI 287

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            + G C   R+  A  +L  M +    P++ TYN L+D    V  V +A  +   I + G
Sbjct: 288 LVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRG 347

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  NI +Y+ ++HG C+   V EA  L  +M       D +T+N +I   CK GK++ A+
Sbjct: 348 VNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYAL 407

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L+D +   G  + D I+Y S+L  +C +  + +A   L KM +EGI P+  T+  LV  
Sbjct: 408 KLVDEMHDRGVPH-DKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDG 466

Query: 561 LFSN 564
           L  N
Sbjct: 467 LCKN 470



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 235/464 (50%), Gaps = 5/464 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM+  G++    +   +IN + ++G    +  +  +I + G +P V     ++  L 
Sbjct: 94  LHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLC 153

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +       +  +   G   N  +Y  L+  LCK  +   A +LL  +  K   P+ V
Sbjct: 154 LKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVV 213

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y TI+ S+CK+  V EA +L     S G+S     YNALI+G C   K+++A  L  +M
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM 273

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +   I+PNV T++ ++   C    ++ +  +L  M  +G  P++ ++ SL+  Y L    
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A  ++N + + G  PN+ +YS +IHG C    +DEA+++  +M  N+  P+V TY++L
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A ++ + M   G   + + Y  ++  LC+N+   +A +L+ KM  E  
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+ T + GLC  GR++ A  + + +     + ++  Y  ++ G        E+ +
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++++E+ G   N VTY  I+  +       +A +LL +M+  G
Sbjct: 514 LLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 206/403 (51%), Gaps = 5/403 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   QAL+   ++   G       Y  +++ L    + S    +   +    ++PNV  Y
Sbjct: 156 GQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMY 215

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-- 161
           N ++ ++CK   V+ A+ L  EM +KG +PD V+Y  ++S  C +G++++A +L  +   
Sbjct: 216 NTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF 275

Query: 162 ---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                 V  +N L++G CKE +++EA  +L  M+ +GI P+V TY++++   C V  V  
Sbjct: 276 ENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNK 335

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  I   +  RG NPNIHS++ ++ G+    +  EA +L+  M     +P+VV Y++LI 
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLID 395

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G +  A+ +  +M +   P +  TY++++D   K   +  A  +  +M   G  P
Sbjct: 396 GLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQP 455

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++  YT +V  LC+N     A  + E +  +    +   +   I+G C  G  D ++ LL
Sbjct: 456 DICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLL 515

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
            +M++  C+PN  TY  ++  L   +   +A +L+ E+   G+
Sbjct: 516 SKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 183/366 (50%), Gaps = 8/366 (2%)

Query: 9   CEIDGVQYLLQQMK-VEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C++      LQ ++ V+G      V +  ++I+S  +V L  +A  ++  +   G+ P V
Sbjct: 188 CKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDV 247

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             YN ++       +      +++ M  + + PNV+T+NIL+   CK  R+  A  +L  
Sbjct: 248 VTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAM 307

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHK 180
           M  +G  PD  +Y +++   C + +V +A+     ++ R     +  Y+ +I+G CK  K
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA  L  EM    I P+V+TY+++I  LC +G +  +L ++ +M  RG   +  ++ S
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L       +  +A  L  +M  EG  P++  Y+TL+ GLC NG +++A  V   +    
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              +V  Y+A+I GF   G    +  + ++M  NGC PN V Y  ++  L   +   +A 
Sbjct: 488 YILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAE 547

Query: 361 SLIEKM 366
            L+ +M
Sbjct: 548 KLLREM 553



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 122/226 (53%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  +++   +   GV+ +   +  +I+ + ++   ++A+ +F  +    + P V  YN
Sbjct: 332 EVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    + S    +   M   G+  +  TYN +L ALCKN++VD A  LL +M ++
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 451

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +YTT+V  +CK G++E+AR    +L ++ +   V++Y A+I G C     +E+
Sbjct: 452 GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDES 511

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             LL +M + G  PN +TY  II SL D    + +  +L +M  RG
Sbjct: 512 LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++D    LL +MK EG+      + ++++   + G  E A  +F  +   G
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V IY  ++    +   F     + S M+ +G  PN  TY I++ +L   +  D A 
Sbjct: 488 YILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAE 547

Query: 121 KLLVEMGNKG 130
           KLL EM  +G
Sbjct: 548 KLLREMITRG 557


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 287/565 (50%), Gaps = 5/565 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L  +  ++G   L+ ++K   +     ++   I+ + + G  + A K F+ ++  G
Sbjct: 223 LVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQG 282

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y  ++  L    R S    ++  M+ +   P  + YN ++       + + AY
Sbjct: 283 LKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAY 342

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS--GVSVYNALINGLC 176
           KLL ++  +GC P  VS+ +I++ + K  +V+EA  L  AM+  +    S YN +I+ LC
Sbjct: 343 KLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLC 402

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              K+EEA+ +  EM   G+ PN++T + ++  LC     E +  +      RGCNPN  
Sbjct: 403 MAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ SL+ G    G   +A  L+  M+  G   N V Y++LI     +G  ++   +  +M
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
               C P++T  +  +D   KAG++     I+  +   G  P+V +Y+ ++  L +    
Sbjct: 523 NRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQA 582

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +  S+   M  +    +   +N  + G C  G++D A ++L++MK     P + TY  +
Sbjct: 583 RETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSI 642

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +  GI+LN++ Y++++ G  + G + EA+ +L +M+ +G 
Sbjct: 643 IDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGL 702

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+N ++ A  K  ++N A+     ++   + +P+  +Y+ L+ G+C      +AF
Sbjct: 703 TPNVYTWNSLMDALVKAEEINEALICFQSMK-EMKCSPNTYTYSILINGLCRVQKYNKAF 761

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
           ++ Q+M  +G+ PN  T+  ++  L
Sbjct: 762 VFWQEMQKQGLVPNVVTYTTMIAGL 786



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/567 (25%), Positives = 284/567 (50%), Gaps = 9/567 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L     +D  + ++  M+      +   +  +I +       E+AL++  +++E G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +  V ++  ++ AL  E R      +   +K   +EP++  YN+ +    K   VD A+
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 272

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
           K   E+ ++G  PD VSYT+++  +CK G++ EA EL  +  +  +V     YN +I G 
Sbjct: 273 KFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGY 332

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               + E A+ LL ++ +RG  P+V+++++I++ L     V+ +L +   M  +   PN 
Sbjct: 333 GSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM-KKDAEPNS 391

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++    + G+  EA  + + M   G  PN++  + ++  LC     + A  +   
Sbjct: 392 STYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFET 451

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
             +  C PN  TY +LIDG  K GN+  A +++  M+  G + N V YT +++    +  
Sbjct: 452 ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGR 511

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
               H + ++M    C P+    NT++  +   G V+    + + +K Y  LP++ +Y+ 
Sbjct: 512 KEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSI 571

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +  + +E   +   +++ G  L+   YN ++ G C++G + +A+++L +M ++ 
Sbjct: 572 LIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR 631

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQE 534
                 T+  II    K  +++ A  L +  +  G E N  +I Y+SL+ G    G + E
Sbjct: 632 VPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELN--VIVYSSLIDGFGKVGRIDE 689

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           A++ L++M+ +G+ PN  TWN L+ +L
Sbjct: 690 AYLILEEMMKKGLTPNVYTWNSLMDAL 716



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 269/542 (49%), Gaps = 9/542 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L +   +   + L  QM+ E  V C+   + ++I  Y   G  E A K+  +++E 
Sbjct: 293 MIWVLCKAGRLSEAEELFGQMETERAVPCAYA-YNTMIMGYGSAGQFENAYKLLDQLKER 351

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P+V  +N IL  L  + +      ++  MK+D  EPN  TYNI++  LC   +V+ A
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEA 410

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMRFGSGVSV-YNALING 174
           Y +  EM + G  P+ ++   +V  +CK  + E A E+    + R  +  SV Y +LI+G
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K+  +++A+ L   M+D G + N + Y+++I +    G  E    I  +M  RGC P+
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +    + +      G   +   ++  +   GFLP+V +YS LIHGL   G   E  S+ +
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M++     +   Y+A++DGF K+G L  A ++   M      P V  Y  ++  L + +
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A+ L E+   +    N + +++ I G    GR+D A  +L++M +    PN+ T+N
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D L++   + EA      +++     N  TY+ +++G+CR     +AF    +M  +
Sbjct: 711 SLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ 770

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   + +T+  +I    K G + +A  L +R +  G   PD  S+ +L+ G+ ++    E
Sbjct: 771 GLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG-GTPDAASFNALIEGMSHANRAIE 829

Query: 535 AF 536
           A+
Sbjct: 830 AY 831



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 251/515 (48%), Gaps = 6/515 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G   + +    LL Q+K  G   S   F S++    +    ++AL +F  +++  
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-D 386

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN I+D L    +      I   M+  G+ PN+ T NI++  LCK  + + AY
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAY 446

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGL 175
           ++      +GC P++V+Y +++  + K G V++A  L    +  G   +  VY +LI   
Sbjct: 447 EMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNF 506

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               + E+   +  EM  RG  P++   +T +  +   G+VE    I   +   G  P++
Sbjct: 507 FMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDV 566

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S++ L+ G    G+  E S +++ M ++GF  +  AY+ ++ G C +G +D+A  V  +
Sbjct: 567 RSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEE 626

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+    PP V TY ++IDG AK   L  A  ++    S G   NV+ Y+ ++    +   
Sbjct: 627 MKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 686

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A+ ++E+M  +   PN  T+N+ +  L     ++ A+     MK+ +C PN  TY+ 
Sbjct: 687 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 746

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++GL RV +  +AF    E++K G+  N+VTY T++ G+ + G + +A  L  +    G
Sbjct: 747 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANG 806

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
              DA +FN +I       +   A  + +  R  G
Sbjct: 807 GTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 213/494 (43%), Gaps = 41/494 (8%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG+K ++D    L + MK +    S    I +I+     G  E+A  +   +   GL P 
Sbjct: 367 LGKKRKVDEALTLFEAMKKDAEPNSSTYNI-IIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL- 123
           +   N ++D L    +F     ++    + G  PN  TY  L+  L K   VD AY+L  
Sbjct: 426 LLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFE 485

Query: 124 ----------------------------------VEMGNKGCAPDAVSYTTIVSSICKLG 149
                                              EM  +GC PD     T +  + K G
Sbjct: 486 NMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAG 545

Query: 150 QVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            VE+ R +        F   V  Y+ LI+GL K  +  E   +   M  +G   +   Y+
Sbjct: 546 DVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYN 605

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++   C  G ++ +  +L +M V+   P + ++ S++ G     R  EA  L+     +
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK 665

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   NV+ YS+LI G    G +DEA  +  +M +    PNV T+++L+D   KA  +  A
Sbjct: 666 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEA 725

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              +  M    CSPN   Y+ ++  LC+   +++A    ++M  +   PN VT+ T I G
Sbjct: 726 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAG 785

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G +  A  L ++ K     P+  ++N L++G+   NR  EA+ +  E    G ++N
Sbjct: 786 LAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN 845

Query: 445 IVTYNTILHGVCRA 458
           +    ++L  + +A
Sbjct: 846 VKACISLLDALNKA 859



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 126/521 (24%), Positives = 236/521 (45%), Gaps = 46/521 (8%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
            YN +L  L  +  +    K+L EM   G      +   +VS++ +  ++++A  +  AM
Sbjct: 116 AYNAVLPFLSHD--LAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAM 173

Query: 160 R---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           R   F    S Y  LI  + +  + E A  LL +M + G +  V  ++T++ +L   G V
Sbjct: 174 RRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRV 233

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +L ++ ++      P+I  +   +  +   G    A   ++ +  +G  P+ V+Y+++
Sbjct: 234 EGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSM 293

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC  G + EA  +  QME     P    Y+ +I G+  AG    A ++ +++   GC
Sbjct: 294 IWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGC 353

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV++  ++  L +     +A +L E M  ++  PN+ T+N  I  LC  G+V+ A  
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYM 412

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + D+M+     PN+ T N ++D L +  + + A+E+     + G   N VTY +++ G+ 
Sbjct: 413 IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLG 472

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIII----------------------------- 487
           + G V +A++L   ML  G   + + +  +I                             
Sbjct: 473 KKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLT 532

Query: 488 ----YAYC--KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
               Y  C  K G V     + + I+G G + PD+ SY+ L+ G+  +G  +E       
Sbjct: 533 LLNTYMDCVFKAGDVEKGRAIFEDIKGYG-FLPDVRSYSILIHGLTKAGQARETSSIFHA 591

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVY-ILDDIMANK 581
           M  +G   +   +N +V   F   G L   Y +L+++   +
Sbjct: 592 MKQQGFALDARAYNAVVDG-FCKSGKLDKAYEVLEEMKVKR 631



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 195/398 (48%), Gaps = 4/398 (1%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YNA++  L   H +     +L EM   G        + ++S+L     ++ +  ++ 
Sbjct: 114 ADAYNAVLPFL--SHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIA 171

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M      P   ++T L+       +   A +L  +M   G+   V  ++TL+  L   G
Sbjct: 172 AMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREG 231

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            ++ A+++  +++ +   P++  Y+  ID F KAGN+  A + ++ + S G  P+ V+YT
Sbjct: 232 RVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYT 291

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            M+ VLC+     +A  L  +M  E   P    +NT I G    G+ + A KLLDQ+K+ 
Sbjct: 292 SMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKER 351

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C+P++ ++N +L  L +  +V EA  L   ++K   + N  TYN I+  +C AG V EA
Sbjct: 352 GCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYNIIIDMLCMAGKVEEA 410

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           + +  +M   G   + +T NI++   CK  K   A ++ +     G  NP+ ++Y SL+ 
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRG-CNPNSVTYCSLID 469

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G+   G + +A+   + ML+ G   N   +  L+R+ F
Sbjct: 470 GLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFF 507



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 139/283 (49%), Gaps = 5/283 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +   MK +G +     + +V++ + + G  ++A ++   ++   + PTV  Y  I+D L 
Sbjct: 588 IFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLA 647

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R      ++   K  G+E NV  Y+ L+    K  R+D AY +L EM  KG  P+  
Sbjct: 648 KIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 707

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ +++ ++ K  ++ EA         M+       Y+ LINGLC+  K  +AF    EM
Sbjct: 708 TWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 767

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+ PNV+TY+T+I+ L  VGN+  +  +  +    G  P+  SF +L++G     R 
Sbjct: 768 QKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRA 827

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            EA  ++     +G   NV A  +L+  L     +++A  V +
Sbjct: 828 IEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGF 870



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 69/154 (44%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  EI+      Q MK    S +   +  +IN   RV    +A   +  +++ G
Sbjct: 712 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 771

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y  ++  L      +    ++   K +G  P+  ++N L++ +   NR   AY
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAY 831

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            +  E   KGC  +  +  +++ ++ K   +E+A
Sbjct: 832 HVFEETRLKGCRINVKACISLLDALNKAECLEQA 865


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 268/527 (50%), Gaps = 6/527 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           Y +  + EQ L +F ++ +  L P VK  N IL  L  ++  S    +Y  M   G++P 
Sbjct: 174 YSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPT 233

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-- 157
           + TYN LL + CK  +V     LL EM  +GCAP+ V+Y  +++ + K G+ E+A+ L  
Sbjct: 234 IVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIG 293

Query: 158 -AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             ++ G  VS   YN LI G   +  + EA  L  EMV +G  P V TY++ I  LC +G
Sbjct: 294 EMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLG 353

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +  ++  L  M      P++ S+ +L+ GY   G   +A  L++ +      P +V Y+
Sbjct: 354 RMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYN 413

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TL+ GLC  G ++ A  +  +M      P++ TY+ L++G  K G+L  A + ++ M+  
Sbjct: 414 TLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHE 473

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G   +  AY   +    +     +A SL E+M  +  PP+ + +N  + GLC  G ++ A
Sbjct: 474 GLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 533

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            +LL +M     +P+  TY  ++   L   R+++  E+  E+   G+  ++VTY  ++HG
Sbjct: 534 SELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHG 593

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
               G +  AF    +M  +G   + IT+N +I   CK  +++ A      +   G + P
Sbjct: 594 HAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF-P 652

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  SYT L+   CN G  QEA    ++ML+ G+ P+  T + L++ L
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 219/441 (49%), Gaps = 5/441 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  G + ++  +  +IN   + G  EQA  +   + + GLK +   YN ++    
Sbjct: 256 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 315

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   +    +   M   G  P V TYN  +  LCK  R+  A + L +M      PD V
Sbjct: 316 NKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 375

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T++   C+LG + +A  L     S      +  YN L++GLC++ ++E A  L  EM
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++ GI P+++TY+ +++  C +G++  +     +M   G   + +++ + + G L  G T
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L   M+ +GF P+++ Y+ ++ GLC  G+++EA  +  +M  +   P+  TY+++
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I    + G L    +I+  M+S G +P+VV YT ++          +A     +M  +  
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T+N+ I GLC   R+D A     +M +    PN  +Y  L++    +   +EA  
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 432 LVTEIEKCGIQLNIVTYNTIL 452
           L  ++   G+Q +  T++ +L
Sbjct: 676 LYKQMLDRGVQPDSCTHSALL 696



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 239/523 (45%), Gaps = 55/523 (10%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-----------GCAPDAVSYTTI 141
           + G   + F +  +L+ L +NN +  AY ++  + N            GC    VS   +
Sbjct: 108 QPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKIL 167

Query: 142 ---VSSICKLGQVEE-----ARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
              +    K   VE+      + +  R    V   N ++  L  +  + +A  +   M +
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
            GI P ++TY+T++ S C  G V+  L +L +M  RGC PN  ++  L+ G    G   +
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L   M++ G   +   Y+ LI+G  + G + EA+S+  +M      P V TY++ I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G +  A Q  + M++N   P+VV+Y  ++   C+     +A  L +++      P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL------------- 420
             VT+NT + GLC  G ++ A +L  +M      P+I TY  L++G              
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 421 ----------------------LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
                                 L++     AF L  E+   G   +++ YN ++ G+C+ 
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + EA +LL KM+ +G   D +T+  II+A+ + G++    ++   +   G   P +++
Sbjct: 528 GNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG-LTPSVVT 586

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           YT L+ G    G ++ AFIY  +M  +GI PN  T+N L+  L
Sbjct: 587 YTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 197/425 (46%), Gaps = 40/425 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K E +  + L+ +M   G+  S   +  +I  Y   G+  +AL +   +   G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV-------------------- 100
             PTV  YN  +  L    R S      S+M  + + P+V                    
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 101 ---------------FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                           TYN LL  LC+   ++ A +L VEM N+G APD V+YT +V+  
Sbjct: 395 LLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS 454

Query: 146 CKLGQVEEARELAMR-FGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CK+G +  A+E        G+ +    Y   I G  K      AF L  EM+ +G  P++
Sbjct: 455 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 514

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           I Y+ ++  LC +GN+E +  +L +M   G  P+  ++TS++  +L  GR  +  +++  
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+ +G  P+VV Y+ LIHG    G ++ A     +M+E    PNV TY++LI+G  K   
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A   +  M+  G  PN  +YT ++   C    + +A SL ++M      P++ T + 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 381 FIKGL 385
            +K L
Sbjct: 695 LLKQL 699



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 169/331 (51%), Gaps = 5/331 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  Y R+G   +A  +F  +R   L PT+  YN +LD L  +    +   +   M  +
Sbjct: 379 TLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINE 438

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P++ TY IL+   CK   +  A +   EM ++G   D+ +Y T +    KLG    A
Sbjct: 439 GIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRA 498

Query: 155 -----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                  LA  F   + +YN +++GLCK   +EEA  LL +MV  G+ P+ +TY++II +
Sbjct: 499 FSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHA 558

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
             + G +     I  +M  +G  P++ ++T L+ G+   GR   A   ++ M  +G LPN
Sbjct: 559 HLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPN 618

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V+ Y++LI+GLC    MD+A +   +M E    PN  +Y+ LI+     GN   A  ++ 
Sbjct: 619 VITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYK 678

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           +M+  G  P+   ++ ++K L ++      H
Sbjct: 679 QMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 171/615 (27%), Positives = 279/615 (45%), Gaps = 81/615 (13%)

Query: 21  MKVEGV---SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           MK +GV     S  +F+  + S +R    E  L++F  I E GL+P   +Y   + A + 
Sbjct: 138 MKKDGVLPSVASLNLFLESLVSTKRY---EDTLQLFSEIVESGLRPDQFMYGKAIQAAVK 194

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                    + + MKR G+ P VF YN+++  LCK  R+  A KL  EM ++  AP+ ++
Sbjct: 195 LGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRIT 254

Query: 138 YTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y T++   CK+GQ+EEA  +  R         +  +N+L+NGLC+   +EEA  +L EM 
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314

Query: 193 DRGIDPNVITYST-----------------------------------IISSLCDVGNVE 217
             G  P+  TY+T                                   ++++LC  GN+E
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +  +L +    G  P    F +++ GY   G  ++A     +M   G  PN V Y++L+
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C   +M+EA     +M E    PNV TY+ LIDG+ ++       QI   M   G  
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNV++Y C++  LC++    +A  ++  M      PN   +N  I G C  G++  A + 
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRF 554

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            D+M   E +P + TYN L++GL +  +V EA  L +EI + G+  +++TYN+++ G   
Sbjct: 555 FDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSS 614

Query: 458 AGMVVEAFQLLGKMLIEGTK----------------------------------LDAITF 483
           AG V +A +L   M   G K                                   D + +
Sbjct: 615 AGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIY 674

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N +I+ Y + G V  A  L   +   G   PD ++Y  L+ G    G M +    +  M 
Sbjct: 675 NALIHCYVEHGDVQKACSLHSAMEAQG-IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMK 733

Query: 544 NEGICPNFATWNVLV 558
             G+ P   T+++L+
Sbjct: 734 IRGLIPKTETYDILI 748



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 262/519 (50%), Gaps = 6/519 (1%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           +  ++ +++  +++ G+ P+V   N  L++L++  R+     ++S +   G+ P+ F Y 
Sbjct: 127 MVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYG 186

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAM 159
             ++A  K   +  A +L+  M   G +P    Y  ++  +CK  ++++A +     L  
Sbjct: 187 KAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDR 246

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R       YN LI+G CK  ++EEAF +   M    ++P +IT++++++ LC    +E +
Sbjct: 247 RVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEA 306

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +L +M V G  P+  ++T+L  G+L  G    +  L    +R+G        S L++ 
Sbjct: 307 QRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNA 366

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G+M++A  V  +  EN   P    ++ +++G+ + G++  A     +M + G  PN
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPN 426

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            V Y  +VK  C+     +A   I+KM  +   PN  T+NT I G       D   ++L+
Sbjct: 427 HVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILE 486

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M++    PN+ +Y  L++ L +   + EA  ++ ++   G+  N   YN ++ G C AG
Sbjct: 487 EMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAG 546

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + +AF+   +M+        +T+NI+I   CK+GKV  A  L   I   G  + D+I+Y
Sbjct: 547 KLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG-LSFDVITY 605

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            SL+ G  ++G +Q+A    + M   GI P   T++ L+
Sbjct: 606 NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLI 644



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 138/572 (24%), Positives = 267/572 (46%), Gaps = 40/572 (6%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + L  +M    V+ +   + ++I+ Y +VG  E+A  +  R++   ++PT+  +N +L+
Sbjct: 236 AEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLN 295

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L           +   M+  G  P+ FTY  L     K   VD +  L  E   KG   
Sbjct: 296 GLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI 355

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLL 188
              + + +++++CK G +E+A E+  +F  +G++     +N ++NG C+   I +A+  +
Sbjct: 356 LDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTI 415

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M   G+ PN +TY++++   C++ N+E +   + +M  +G  PN+ ++ +L+ GY   
Sbjct: 416 EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
                   +   M ++G  PNV++Y  LI+ LC + ++ EA  +   M      PN   Y
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LIDG   AG L  A + ++ M++    P +V Y  ++  LC+     +A +L  ++  
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL-----DGLLRV 423
           +    + +T+N+ I G    G V  A++L + MK+    P + TY+ L+     +GL+ V
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLV 655

Query: 424 NR-----------------------------VKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            +                             V++A  L + +E  GIQ + +TYN ++ G
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
             + G + +   L+  M I G      T++I+I  +CK    + A      +   G + P
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENG-FTP 774

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
            +    +L+ G+   G   +A +   +M  +G
Sbjct: 775 SVSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 193/428 (45%), Gaps = 37/428 (8%)

Query: 167 VYNALINGLCKEHK-IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           +++ ++  +C E K + E+  L   M   G+ P+V + +  + SL      E +L +  +
Sbjct: 113 LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSE 172

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           +   G  P+   +   ++  +  G    A +L   M R G  P V  Y+ +I GLC    
Sbjct: 173 IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKR 232

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           M +A  +  +M +    PN  TY+ LIDG+ K G L  A  I  RM      P ++ +  
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD------ 399
           ++  LC+  M  +A  ++E+M      P+  T+ T   G   CG VD ++ L +      
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352

Query: 400 -QMKQYEC----------------------------LPNITTYNELLDGLLRVNRVKEAF 430
            Q+  Y C                             P    +N +++G  +V  + +A+
Sbjct: 353 VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAY 412

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
             + ++E  G++ N VTYN+++   C    + EA + + KM+ +G   +  T+N +I  Y
Sbjct: 413 TTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGY 472

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            +    +   Q+L+ +   G   P++ISY  L+  +C    + EA + L  M++ G+ PN
Sbjct: 473 GRSCLFDRCFQILEEMEKKG-LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPN 531

Query: 551 FATWNVLV 558
              +N+L+
Sbjct: 532 AQIYNMLI 539



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 176/402 (43%), Gaps = 33/402 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K  E   ++  +  +++M  +GV  +   + ++I+ Y R  L ++  ++   + + G
Sbjct: 433 LVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG 492

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y  +++ L  +        I  +M   G+ PN   YN+L+   C   ++  A+
Sbjct: 493 LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAF 552

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +   EM  +   P  V+Y  +++ +CK G+V EA  LA                      
Sbjct: 553 RFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLA---------------------- 590

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                    E+  +G+  +VITY+++IS     GNV+ +L +   M   G  P ++++  
Sbjct: 591 --------SEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHR 642

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G       ++  M++   +P+ V Y+ LIH    +G + +A S+   ME   
Sbjct: 643 LIAGCGKEGLVL-VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQG 701

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  TY+ LI G  K G +     + N M   G  P    Y  ++   C+   F  A+
Sbjct: 702 IQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAY 761

Query: 361 SLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
               +M FEN   P+    +  I GL   GR   A  +  +M
Sbjct: 762 VWYREM-FENGFTPSVSICDNLITGLREEGRSHDADVICSEM 802


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 148/467 (31%), Positives = 244/467 (52%), Gaps = 6/467 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           E N +T NI++   CK    D    ++ EM  +   PD V++  +V +  + G  E A  
Sbjct: 92  EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151

Query: 157 LAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L     S     G+  YN+++ GLC+    ++A+ +  EM D G+ P+V +++ +I   C
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            VG +E +L I  +M  RG  P++ SF+ L+  +   G+   A      M   G +P+ V
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ +I G C  G M +A+ V  +M    C P+V TY+ L++G  K   LL A  + N M
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G  P++  +T ++   C      +A  L + M  +   P+ VT+NT I G+C  G +
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A  L D M   E  PN  TY+ L+D      +V++AF  + E+   GI  NI+TYN+I
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G CR+G V +  + L KM++     D IT+N +I+ Y K+ K+++A +LL+ +    +
Sbjct: 452 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME-KEK 510

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             PD+++Y  L+ G    G +QEA    +KM  +GI P+  T+  ++
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 236/454 (51%), Gaps = 5/454 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  +N ++DA            +  +M   G++P + TYN +LK LC++   D A+++
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEV 187

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCK 177
             EM + G APD  S+T ++   C++G++EEA    +E+  R     +  ++ LI    +
Sbjct: 188 FKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR 247

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             K++ A   L EM   G+ P+ + Y+ +I   C  G +  +L +  +M   GC P++ +
Sbjct: 248 RGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVT 307

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +LL G     R  +A  L N M   G  P++  ++TLIHG C  G +D+A+ +   M 
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P++ TY+ LIDG  + G+L  A+ +W+ M S    PN V Y+ ++   C+     
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A   +++M  +   PN +T+N+ IKG C  G V    K L +M   +  P++ TYN L+
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            G ++ +++ +AF+L+  +EK  +Q ++VTYN +++G    G V EA  +  KM  +G +
Sbjct: 488 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 547

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
            D  T+  +I  +   G    A QL D +   G+
Sbjct: 548 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 220/445 (49%), Gaps = 5/445 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++      + +    L+  M  +G+      + SV+    R G+ ++A ++F  + +FG
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V+ +  ++              IY  M+  G++P++ +++ L+    +  ++D A 
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGL 175
             L EM   G  PD V YT ++   C+ G + +A R      G G    V  YN L+NGL
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++ +A  LL EM +RG+ P++ T++T+I   C  G ++ +L +   M  +   P+I
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G    G   +A+DLW+ M      PN V YS LI   C  G +++A     +
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN+ TY+++I G+ ++GN+    +   +M+ N  SP+++ Y  ++    + + 
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H A  L+  M  E   P+ VT+N  I G    G V  A  + ++M      P+  TY  
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCG 440
           +++G +     KEAF+L  E+ + G
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 195/361 (54%), Gaps = 1/361 (0%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  T + ++ + C     +    ++ +M  R   P++ +   ++      G    A  L 
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           + M+ +G  P +V Y++++ GLC +G  D+A  V  +M++    P+V +++ LI GF + 
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A +I+  M   G  P++V+++C++ +  +      A + + +M      P+ V +
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I G C  G +  A+++ D+M    CLP++ TYN LL+GL +  R+ +A  L+ E+ +
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  ++ T+ T++HG C  G + +A QL   ML +  + D +T+N +I   C+QG ++ 
Sbjct: 334 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 393

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A  L D +    E  P+ ++Y+ L+   C  G +++AF +L +M+N+GI PN  T+N ++
Sbjct: 394 ANDLWDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452

Query: 559 R 559
           +
Sbjct: 453 K 453



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 37/369 (10%)

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G  H A+D +  +       N    + ++H  C     D+  +V  +ME+    P+V T
Sbjct: 73  AGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVT 132

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ ++D   +AG+   A  + + M+S G  P +V Y  ++K LC++ M+ +A  + ++M 
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMD 192

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ---------YECL----------- 407
                P+  +F   I G C  G ++ A+K+  +M+          + CL           
Sbjct: 193 DFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 252

Query: 408 ---------------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                          P+   Y  ++ G  R   + +A  +  E+  CG   ++VTYNT+L
Sbjct: 253 HAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLL 312

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G+C+   +++A  LL +M   G   D  TF  +I+ YC +GK++ A+QL D +      
Sbjct: 313 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ-RL 371

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            PDI++Y +L+ G+C  G + +A      M +  I PN  T+++L+ S     G +   +
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS-HCEKGQVEDAF 430

Query: 573 ILDDIMANK 581
              D M NK
Sbjct: 431 GFLDEMINK 439



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 168/361 (46%), Gaps = 4/361 (1%)

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I+  +      P    F  L++ Y    +  EA + + R+I +  +P   A S  +    
Sbjct: 12  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAF-RLILDHRVPIPAAASNALLAAL 70

Query: 282 SNGSMDEAVSVSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           S        + +Y++  +S    N  T + ++  + KA        + + M      P+V
Sbjct: 71  SRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDV 130

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V +  MV    +      A +L++ M  +   P  VT+N+ +KGLC  G  D A ++  +
Sbjct: 131 VTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M  +   P++ ++  L+ G  RV  ++EA ++  E+   GI+ ++V+++ ++    R G 
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           +  A   L +M   G   D + + ++I  +C+ G +++A+++ D + G G   PD+++Y 
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL-PDVVTYN 309

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +LL G+C    + +A   L +M   G+ P+  T+  L+   +   G L     L D M N
Sbjct: 310 TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG-YCIEGKLDKALQLFDTMLN 368

Query: 581 K 581
           +
Sbjct: 369 Q 369


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 264/510 (51%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  ++   N LLK  C+  R D A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY+ ++ S+C  G+  +A +L      G       V  YN +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  KE  + +A  L  EMV RGI P+ +TYS+++ +LC    ++ +   L QM  +G  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN  ++ +L+ GY   G+  EA  ++  M R+  LP+VV ++ L+  LC  G + EA  V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P+V +Y+ +++G+A  G L+  + +++ M+ +G +P +  +  ++K    
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      PN +T+ T I  LC  G++D AM+  +QM      P+   
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+ G      + +A EL++EI   G+ L+IV +++I++ +C+ G V++A  +    +
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G    A+ +++++  YC  GK+  A+++ D +   G   P+ + Y +L+ G C  G +
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNDVVYGTLVNGYCKIGRI 585

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML +GI P+   +N+++  LF
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLF 615



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 263/555 (47%), Gaps = 8/555 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P    Y+ ++ A
Sbjct: 204 LLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHA 263

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L               M   G+ PN +TYN L+       +   A ++  EM  +   PD
Sbjct: 264 LCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPD 323

Query: 135 AVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V++  ++ S+CK G+++EAR+    +AM+     V  YN ++NG   +  + +   L  
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M+  GI P + T++ +I +  + G ++ ++ I  +M   G  PN+ ++T+++      G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A + +N+MI +G  P+  AY  LI G C++GS+ +A  +  ++  N    ++  +S
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFS 503

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+   K G ++ A  I++  ++ G  P  V Y+ ++   C      +A  + + M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN V + T + G C  GR+D  + L  +M Q    P+   YN ++DGL    R   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                E+ + GI +N  TY+ +L G+ +     EA  L  ++     K+D IT N +I  
Sbjct: 624 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 683

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +V  A  L   I   G   P +++Y+ ++  +   G ++EA      M N G  P
Sbjct: 684 MFQTRRVEEAKDLFASISRSG-LVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742

Query: 550 NFATWNVLVRSLFSN 564
           +    N +VR L   
Sbjct: 743 DSRLLNHVVRELLKK 757



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/567 (25%), Positives = 265/567 (46%), Gaps = 46/567 (8%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R    E AL  F ++   GL+  + I NH+L       R    ++ +       G  P+V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEA---- 154
           F+Y+ILLK+LC   +   A  LL  M   G  C+PD V+Y T++    K G V +A    
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLF 242

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN-------------- 199
           +E+  R        Y+++++ LCK   +++A   L +MV++G+ PN              
Sbjct: 243 KEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST 302

Query: 200 ---------------------VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
                                V+T++ ++ SLC  G ++ +  +   M ++G NP++ S+
Sbjct: 303 GQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             +L GY   G   + +DL++ M+ +G  P +  ++ LI    + G +D+A+ +  +M +
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   PNV TY+ +I    + G +  A + +N+MI  G +P+  AY C+++  C +    +
Sbjct: 423 HGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLK 482

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  LI ++       + V F++ I  LC  GRV  A  + D        P    Y+ L+D
Sbjct: 483 AKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMD 542

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G   V ++++A  +   +   GI+ N V Y T+++G C+ G + E   L  +ML +G K 
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602

Query: 479 DAITFNIIIYAYCKQGK-VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
             I +NIII    + G+ V   ++  +    G   N    +Y+ +L G+  +    EA  
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK--CTYSIVLRGLFKNRCFDEAIF 660

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
             +++    +  +  T N ++  +F  
Sbjct: 661 LFKELRAMNVKIDIITLNTMIAGMFQT 687



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/533 (23%), Positives = 257/533 (48%), Gaps = 40/533 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  +  L+QM  +GV  +   + ++I  Y   G  ++A+++F  +R   + P V  +N 
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNM 329

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL----------------------- 107
           ++ +L    +      ++  M   G  P+VF+YNI+L                       
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG 389

Query: 108 ------------KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
                       KA      +D A  +  EM + G  P+ ++YTT+++++C++G++++A 
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAM 449

Query: 156 E-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E        GV+     Y+ LI G C    + +A  L+ E+++ G+  +++ +S+II++L
Sbjct: 450 EKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNL 509

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C +G V  +  I       G +P    ++ L+ GY L G+  +A  +++ M+  G  PN 
Sbjct: 510 CKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPND 569

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y TL++G C  G +DE +S+  +M +    P+   Y+ +IDG  +AG  + A   ++ 
Sbjct: 570 VVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 629

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  +G + N   Y+ +++ L +N  F +A  L +++   N   + +T NT I G+    R
Sbjct: 630 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 689

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V+ A  L   + +   +P + TY+ ++  L++   V+EA ++ + ++  G + +    N 
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  + +   +V A   L K+      L+ +T  +++  +  +G     I+ L
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 198/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   +I     LLKG+    RT E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +YS L+  LC  G   +A  +   M E    C P+V  Y+ 
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNT 224

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G++  A  ++  M+  G  P+ V Y+ +V  LC+     +A + + +M  + 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+N  I G    G+   A+++  +M++   LP++ T+N L+  L +  ++KEA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   ++ +YN +L+G    G +V+   L   ML +G      TFN++I AY
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   P++++YT+++  +C  G M +A     +M+++G+ P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHG-VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              ++ L++   ++   L    ++ +IM N
Sbjct: 464 KYAYHCLIQGFCTHGSLLKAKELISEIMNN 493



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 146/327 (44%), Gaps = 5/327 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV+  +  +  +I  +   G   +A ++   I   G+   + +++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFS 503

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G+ P    Y++L+   C   +++ A ++   M + 
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  +       +YN +I+GL +  +   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  N  TYS ++  L      + ++ +  ++       +I +  +++ G
Sbjct: 624 KVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 683

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+  + R G +P VV YS +I  L   G ++EA  +   M+   C P+
Sbjct: 684 MFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM 331
               + ++    K   ++ A    +++
Sbjct: 744 SRLLNHVVRELLKKNEIVRAGAYLSKI 770


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 267/495 (53%), Gaps = 10/495 (2%)

Query: 62  KPTVKI--YNHILDALLAEN--RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           KPT  I  +N IL +L+  N   +     +   ++  G+ P++FT+NIL+   C    ++
Sbjct: 61  KPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMN 120

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALI 172
            A+ ++ ++   G  PD +++ T++  +C  G+V+EA       LA+ F      Y  LI
Sbjct: 121 FAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLI 180

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NGLCK  +   A  +L ++  + +  NV+ Y+TII SLC    V  +  +  QM  +  +
Sbjct: 181 NGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ +F++L+ G+ + G+  EA  L+  M+ +   P+   ++ L+  LC  G++  A ++
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M +    PNV TYS+L+DG+     +  A  + N +   G +PN  +Y  M+   C+
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A SL   M F+   P+ VT+N+ I GLC  GR+ +A +L+D+M       NI T
Sbjct: 361 IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT 420

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+D L + + V +A  LV +I+  GIQ ++ T+N +++G+C+ G +  A  +   +L
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G  ++A T+NI++   CK+G  + A  LL ++   G   PD ++Y +L+  + +    
Sbjct: 481 SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII-PDAVTYETLIQALFHKDEN 539

Query: 533 QEAFIYLQKMLNEGI 547
           ++A   L++M+   +
Sbjct: 540 EKAEKLLREMIARDV 554



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 242/462 (52%), Gaps = 9/462 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDAL--LAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           A+ +  R+   G+ P +  +N +++    +AE  F+    + + + + G EP+  T+N L
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAF--SMMAKILKMGYEPDTITFNTL 144

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--- 163
           +K LC N +V  A      +   G   D  SY T+++ +CK+G+   A ++  +      
Sbjct: 145 IKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLV 204

Query: 164 --GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V +YN +I+ LCK   + +A+ L  +M+ + I P+V+T+S +I   C VG +E + G
Sbjct: 205 KINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFG 264

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M ++  NP+ ++F  L+      G    A ++   M++EG +PNVV YS+L+ G C
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +++A  V   + +    PN  +Y  +I+GF K   +  A  ++N M   G +P+ V
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++  LC++     A  L+++M     P N  T+N  I  LC    VD A+ L+ ++
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           K     P++ T+N L+ GL +V R+K A ++  ++   G  +N  TYN +++G+C+ G+ 
Sbjct: 445 KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLF 504

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            EA  LL KM   G   DA+T+  +I A   + +   A +LL
Sbjct: 505 DEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLL 546



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 237/461 (51%), Gaps = 5/461 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++++  G++     F  +IN Y  +     A  M  +I + G +P    +N ++  L 
Sbjct: 90  LSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLC 149

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +       + ++   G   + F+Y  L+  LCK      A ++L ++  K    + V
Sbjct: 150 LNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVV 209

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y TI+ S+CK   V +A EL     A +    V  ++ALI G C   ++EEAF L  EM
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V + I+P+  T++ ++ +LC  GN++ +  +L  M   G  PN+ +++SL+ GY L  + 
Sbjct: 270 VLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQV 329

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A  + N + + G  PN  +Y T+I+G C    +DEA+S+   M+     P+  TY++L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +  A ++ + M  NG   N+  Y C++  LC+N+   QA +L++K+  +  
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  TFN  I GLC  GR+  A  +   +       N  TYN +++GL +     EA  
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           L+++++  GI  + VTY T++  +       +A +LL +M+
Sbjct: 510 LLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 210/397 (52%), Gaps = 1/397 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           +  +N LIN  C   ++  AF ++ +++  G +P+ IT++T+I  LC  G V+ +L    
Sbjct: 103 IFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHD 162

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            +   G + +  S+ +L+ G    G T  A  +  ++  +    NVV Y+T+I  LC + 
Sbjct: 163 HVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHK 222

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            + +A  +  QM      P+V T+SALI GF   G L  A  ++  M+    +P+   + 
Sbjct: 223 LVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFN 282

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            +V  LC+      A +++  M  E   PN VT+++ + G C   +V+ A  +L+ + Q 
Sbjct: 283 ILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQM 342

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN  +Y  +++G  ++  V EA  L  +++  GI  + VTYN+++ G+C++G +  A
Sbjct: 343 GAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYA 402

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           ++L+ +M   G   +  T+N +I A CK   V+ AI L+ +I+  G   PD+ ++  L++
Sbjct: 403 WELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG-IQPDMYTFNILIY 461

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G+C  G ++ A    Q +L++G   N  T+N++V  L
Sbjct: 462 GLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGL 498



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 174/333 (52%), Gaps = 8/333 (2%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K  ID  + L  QM  + +S     F ++I  +  VG  E+A  +F  +    + P   
Sbjct: 221 HKLVIDAYE-LYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYY 279

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +N ++DAL  E        +   M ++G+ PNV TY+ L+   C  N+V+ A  +L  +
Sbjct: 280 TFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTI 339

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS----VYNALINGLCKEHK 180
              G AP+A SY T+++  CK+  V+EA  L   M+F  G++     YN+LI+GLCK  +
Sbjct: 340 SQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQF-KGIAPDKVTYNSLIDGLCKSGR 398

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I  A+ L+ EM D G   N+ TY+ +I +LC   +V+ ++ ++ ++  +G  P++++F  
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    GR   A D++  ++ +G+  N   Y+ +++GLC  G  DEA ++  +M++N 
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
             P+  TY  LI           A ++   MI+
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREMIA 551



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 185/368 (50%), Gaps = 3/368 (0%)

Query: 199 NVITYSTIISSLCDVGN--VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           ++I ++ I+ SL    N    T++ +  ++   G  P+I +F  L+  Y      + A  
Sbjct: 65  SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +  ++++ G+ P+ + ++TLI GLC NG + EA+     +       +  +Y  LI+G  
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G    A Q+  ++       NVV Y  ++  LC++ +   A+ L  +M  +   P+ V
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           TF+  I G C  G+++ A  L  +M      P+  T+N L+D L +   +K A  ++  +
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            K G+  N+VTY++++ G C    V +A  +L  +   G   +A ++  +I  +CK   V
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A+ L + ++  G   PD ++Y SL+ G+C SG +  A+  + +M + G   N  T+N 
Sbjct: 365 DEALSLFNDMQFKG-IAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423

Query: 557 LVRSLFSN 564
           L+ +L  N
Sbjct: 424 LIDALCKN 431



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 177/366 (48%), Gaps = 8/366 (2%)

Query: 9   CEIDGVQYLLQQM-KVEG--VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C+I   +  LQ + K++G  V  +  ++ ++I+S  +  L   A +++ ++    + P V
Sbjct: 184 CKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDV 243

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             ++ ++       +      ++  M    + P+ +T+NIL+ ALCK   + GA  +LV 
Sbjct: 244 VTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVV 303

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHK 180
           M  +G  P+ V+Y++++   C + QV +A+ +      M        Y  +ING CK   
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA  L  +M  +GI P+ +TY+++I  LC  G +  +  ++ +M   G   NI ++  
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+          +A  L  ++  +G  P++  ++ LI+GLC  G +  A  V   +    
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              N  TY+ +++G  K G    A  + ++M  NG  P+ V Y  +++ L   +   +A 
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAE 543

Query: 361 SLIEKM 366
            L+ +M
Sbjct: 544 KLLREM 549



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 126/225 (56%), Gaps = 5/225 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  +++L  +   G + +   + ++IN + ++ + ++AL +F  ++  G+ P    YN
Sbjct: 328 QVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYN 387

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M  +G   N+FTYN L+ ALCKN+ VD A  L+ ++ ++
Sbjct: 388 SLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQ 447

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKIEEA 184
           G  PD  ++  ++  +CK+G+++ A+++     S G SV    YN ++NGLCKE   +EA
Sbjct: 448 GIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEA 507

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
             LL +M D GI P+ +TY T+I +L      E +  +L +M  R
Sbjct: 508 EALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIAR 552



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 128/267 (47%), Gaps = 5/267 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++  + G + +L  M  EGV  +   + S+++ Y  V    +A  +   I + G
Sbjct: 284 LVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMG 343

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  +++             ++++M+  G+ P+  TYN L+  LCK+ R+  A+
Sbjct: 344 AAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAW 403

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L+ EM + G   +  +Y  ++ ++CK   V++A  L  +         +  +N LI GL
Sbjct: 404 ELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGL 463

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++ A  +  +++ +G   N  TY+ +++ LC  G  + +  +L +M   G  P+ 
Sbjct: 464 CKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDA 523

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI 262
            ++ +L++         +A  L   MI
Sbjct: 524 VTYETLIQALFHKDENEKAEKLLREMI 550


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 242/453 (53%), Gaps = 8/453 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P+  T   L+K L  + R   A ++L       C PD ++Y  +V+  C  GQ++ AR 
Sbjct: 93  RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMVAGYCGAGQLDAARR 147

Query: 157 LA--MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           L   M        YN LI GLC   +   A  +L EM+ R   P+V+TY+ ++ + C   
Sbjct: 148 LVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 207

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             + ++ +L +M  +GC P+I ++  ++ G    GR  +A +    +   G  PN V+Y+
Sbjct: 208 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 267

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            ++ GLC+    ++A  +  +M +  CPPNV T++ LI    + G +  A ++  ++   
Sbjct: 268 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 327

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GC+PN ++Y  ++   C+     +A + ++ M    C P+ V++NT +  LC  G VD A
Sbjct: 328 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 387

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           ++LL Q+K   C P + +YN ++DGL +  + KEA EL+ E+   G+Q +I+TY+TI  G
Sbjct: 388 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 447

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +CR   + +A +  GK+   G + + + +N II   CK+ + ++AI L   + G G   P
Sbjct: 448 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG-CMP 506

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
           +  +YT L+ G+   G ++EA   L ++ + G+
Sbjct: 507 NESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 234/455 (51%), Gaps = 8/455 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           L++L +   +D A +L+         PDA +   ++  +   G+  EAR +    G  V 
Sbjct: 72  LRSLVRRGELDEALRLV----GSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVM 127

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNA++ G C   +++ A  L+ EM    ++P+  TY+T+I  LC  G    +L +L +M
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 184

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             R C P++ ++T LL+         +A  L + M  +G  P++V Y+ +++G+C  G +
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 244

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+     +    C PN  +Y+ ++ G   A     A ++   M   GC PNVV +  +
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 304

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+  +   A  ++E++    C PN++++N  +   C   ++D AM  LD M    C
Sbjct: 305 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 364

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I +YN LL  L R   V  A EL+ +++  G    +++YNT++ G+ +AG   EA +
Sbjct: 365 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 424

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL +M+ +G + D IT++ I    C++ ++ +AI+   +++  G   P+ + Y +++ G+
Sbjct: 425 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG-IRPNTVLYNAIILGL 483

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C       A      M+  G  PN +T+ +L+  L
Sbjct: 484 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 518



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/391 (33%), Positives = 207/391 (52%), Gaps = 5/391 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           + E  ++P    YN ++  L    R +    +   M R    P+V TY ILL+A CK + 
Sbjct: 149 VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 208

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNA 170
              A KLL EM +KGC PD V+Y  +V+ IC+ G+V++A E      S         YN 
Sbjct: 209 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 268

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           ++ GLC   + E+A  L+ EM  +G  PNV+T++ +IS LC  G VE +L +L Q+   G
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 328

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN  S+  LL  +    +  +A    + M+  G  P++V+Y+TL+  LC +G +D AV
Sbjct: 329 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 388

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            + +Q+++  C P + +Y+ +IDG  KAG    A ++ N M+S G  P+++ Y+ +   L
Sbjct: 389 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 448

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+ +    A     K+      PNTV +N  I GLC       A+ L   M    C+PN 
Sbjct: 449 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 508

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +TY  L++GL     +KEA +L+ E+   G+
Sbjct: 509 STYTILIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 234/475 (49%), Gaps = 17/475 (3%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           + S  R G  ++AL++    R    +P       ++  L A  R +    + +       
Sbjct: 72  LRSLVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLA-----AC 122

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-- 154
            P+V  YN ++   C   ++D A +L+ EM  +   PDA +Y T++  +C  G+   A  
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALA 179

Query: 155 ---RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                L  R    V  Y  L+   CK    ++A  LL EM D+G  P+++TY+ +++ +C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G V+ ++  L  +   GC PN  S+  +LKG     R  +A +L   M ++G  PNVV
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++ LI  LC  G ++ A+ V  Q+ +  C PN  +Y+ L+  F K   +  A    + M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +S GC P++V+Y  ++  LC++     A  L+ ++  + C P  +++NT I GL   G+ 
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A++LL++M      P+I TY+ +  GL R +R+++A     +++  GI+ N V YN I
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           + G+C+      A  L   M+  G   +  T+ I+I     +G +  A  LLD +
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 178/350 (50%), Gaps = 30/350 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G +     +  V+N   + G  + A++    +  +G +P    YN +L  L 
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+     +   M + G  PNV T+N+L+  LC+   V+ A ++L ++   GC P+++
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           SY                              N L++  CK+ K+++A   L  MV RG 
Sbjct: 335 SY------------------------------NPLLHAFCKQKKMDKAMAFLDLMVSRGC 364

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P++++Y+T++++LC  G V+ ++ +L Q+  +GC P + S+ +++ G    G+T EA +
Sbjct: 365 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 424

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L N M+ +G  P+++ YST+  GLC    +++A+    ++++    PN   Y+A+I G  
Sbjct: 425 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 484

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           K      A  ++  MI NGC PN   YT +++ L    +  +A  L++++
Sbjct: 485 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 534



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 5/261 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  + L+ +M  +G   +   F  +I+   R GL E AL++  +I ++G  P    YN +
Sbjct: 280 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 339

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L A   + +          M   G  P++ +YN LL ALC++  VD A +LL ++ +KGC
Sbjct: 340 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFW 186
           AP  +SY T++  + K G+ +EA EL     S      +  Y+ +  GLC+E +IE+A  
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
              ++ D GI PN + Y+ II  LC      +++ +   M   GC PN  ++T L++G  
Sbjct: 460 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 519

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             G   EA DL + +   G +
Sbjct: 520 YEGLIKEARDLLDELCSRGVV 540



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 78/164 (47%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL Q+K +G +     + +VI+   + G  ++AL++   +   GL+P +  Y+
Sbjct: 383 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 442

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I   L  E+R       +  ++  G+ PN   YN ++  LCK      A  L   M   
Sbjct: 443 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 502

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALIN 173
           GC P+  +YT ++  +   G ++EAR+L     S   V  +LIN
Sbjct: 503 GCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLIN 546



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 13/161 (8%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L  L+R   + EA  LV    +     +  T   ++  +  +G   EA ++L        
Sbjct: 72  LRSLVRRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEARRVLA-----AC 122

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D + +N ++  YC  G+++ A +L+  +       PD  +Y +L+ G+C  G    A 
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEM----PVEPDAYTYNTLIRGLCGRGRTANAL 178

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
             L +ML     P+  T+ +L+ +     G+   + +LD++
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 263/510 (51%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  N+   N LL+  C+  R D A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY+ ++ S+C  G+  +A +L      G       V  YN +I
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  KE  + +A  L  EMV RGI P+++TY++++ +LC    ++ +   L QM  +   
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN  ++ +L+ GY   G+  EA  ++  M R   LP+VV  S L+  LC  G + EA  V
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P+V +Y+ +++G+A  G L+  + +++ M+ +G +P+   +  ++K    
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 406

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      P+ VT+ T I  LC  G++D AM+  +QM      P+   
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+ G      + +A EL++EI   G+ L+IV +++I++ +C+ G V++A  +    +
Sbjct: 467 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   DA+ +++++  YC  GK+  A+++ D +   G   P+++ Y +L+ G C  G +
Sbjct: 527 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNVVVYCTLVNGYCKIGRI 585

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML  GI P+   +++++  LF
Sbjct: 586 DEGLSLFREMLQRGIKPSTILYSIIIDGLF 615



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 263/566 (46%), Gaps = 44/566 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R    E AL  F ++   GL+  + I NH+L+      R    ++ +       G  P+V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 182

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEA---- 154
           F+Y+ILLK+LC   +   A  LL  M   G  C+P+ V+Y T++    K G V +A    
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 242

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN-------------- 199
           +E+  R     +  YN++++ LCK   +++A   L +MV++ + PN              
Sbjct: 243 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 302

Query: 200 ---------------------VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
                                V+T S ++ SLC  G ++ +  +   M ++G NP++ S+
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             +L GY   G   + +DL++ M+ +G  P+   ++ LI    + G +D+A+ +  +M +
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 422

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+V TY  +I    + G +  A + +N+MI  G +P+  AY C+++  C +    +
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 482

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  LI ++       + V F++ I  LC  GRV  A  + D        P+   Y+ L+D
Sbjct: 483 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 542

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G   V ++++A  +   +   GI+ N+V Y T+++G C+ G + E   L  +ML  G K 
Sbjct: 543 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 602

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             I ++III    + G+   A      +   G    DI +Y  +L G+  +    EA   
Sbjct: 603 STILYSIIIDGLFQAGRTVPAKVKFHEMTESG-IAMDICTYNIVLRGLFKNRCFDEAIFL 661

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSN 564
            +++    +  N  T N ++  +F  
Sbjct: 662 FKELRAMNVKINIITLNTMIDGMFQT 687



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 264/555 (47%), Gaps = 8/555 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P +  YN ++ A
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L               M    + PN +TYN L+       +   A ++  EM      PD
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 323

Query: 135 AVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+ + ++ S+CK G+++EAR+    +AM+     V  YN ++NG   +  + +   L  
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M+  GI P+  T++ +I +  + G ++ ++ I  +M   G  P++ ++ +++      G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A + +N+MI +G  P+  AY+ LI G C++GS+ +A  +  ++  N    ++  +S
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+   K G ++ A  I++  ++ G  P+ V Y+ ++   C      +A  + + M   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN V + T + G C  GR+D  + L  +M Q    P+   Y+ ++DGL +  R   A
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                E+ + GI ++I TYN +L G+ +     EA  L  ++     K++ IT N +I  
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 683

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +V  A  L   I       P +++Y+ ++  +   G ++EA      M N G  P
Sbjct: 684 MFQTRRVEEAKDLFASI-SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742

Query: 550 NFATWNVLVRSLFSN 564
           N    N +VR L   
Sbjct: 743 NSRLLNHVVRELLKK 757



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 242/467 (51%), Gaps = 5/467 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G  ++A  +F  +   G  P V  YN +L+    +     +  ++  M  DG+ P+ +
Sbjct: 336 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 395

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMR 160
           T+N+L+KA      +D A  +  EM + G  PD V+Y T+++++C++G++++A E     
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GV+     YN LI G C    + +A  L+ E+++ G+  +++ +S+II++LC +G V
Sbjct: 456 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  I       G +P+   ++ L+ GY L G+  +A  +++ M+  G  PNVV Y TL
Sbjct: 516 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 575

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++G C  G +DE +S+  +M +    P+   YS +IDG  +AG  + A   ++ M  +G 
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + ++  Y  +++ L +N  F +A  L +++   N   N +T NT I G+    RV+ A  
Sbjct: 636 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 695

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L   + +   +P++ TY+ ++  L++   V+EA ++ + ++  G + N    N ++  + 
Sbjct: 696 LFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 755

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   +V A   L K+      L+ +T  +++  +  +G     I+ L
Sbjct: 756 KKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIRFL 802



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 198/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   NI     LL+G+    RT E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +YS L+  LC  G   +A  +   M E    C PNV  Y+ 
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G++  A  ++  M+  G  P++V Y  +V  LC+     +A + + +M  + 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+N  I G    G+   A+++  +M+++  LP++ T + L+  L +  ++KEA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   ++ +YN +L+G    G +V+   L   ML +G   D  TFN++I AY
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 404

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   PD+++Y +++  +C  G M +A     +M+++G+ P+
Sbjct: 405 ANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              +N L++   ++   L    ++ +IM N
Sbjct: 464 KYAYNCLIQGFCTHGSLLKAKELISEIMNN 493



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/327 (21%), Positives = 147/327 (44%), Gaps = 5/327 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV+  +  +  +I  +   G   +A ++   I   G+   +  ++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G+ P+   Y++L+   C   +++ A ++   M + 
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  R       +Y+ +I+GL +  +   A
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  ++ TY+ ++  L      + ++ +  ++       NI +  +++ G
Sbjct: 624 KVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 683

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+  + R   +P+VV YS +I  L   G ++EA  +   M+   C PN
Sbjct: 684 MFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM 331
               + ++    K   ++ A    +++
Sbjct: 744 SRLLNHVVRELLKKNEIVRAGAYLSKI 770


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 259/546 (47%), Gaps = 63/546 (11%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
             L E+A+ + +R+R     P V  Y  +L   L + +      I S M  +G  PN   
Sbjct: 292 ASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREI 351

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK---------LGQVEE 153
           +N L+ A CK+     AYKL  +M   GC P  + Y   + S+C          L  VE+
Sbjct: 352 FNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEK 411

Query: 154 ARELAMRFG-------------------------------------SGVSVYNALINGLC 176
           A    +  G                                        S Y+ +I  LC
Sbjct: 412 AYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLC 471

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              K+E+AF L  EM   GI P+V TY+ +I S C  G ++ +     +M  +GC PN+ 
Sbjct: 472 DASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVV 531

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS--- 293
           ++T+L+  YL   +   A +L+  M+ EG  PNVV Y+ LI G C  G +++A  +    
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591

Query: 294 ------------YQMEENSCP-PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                       ++++ N+C  PNV TY AL+DG  KA  +  A ++ + M+++GC PN 
Sbjct: 592 RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQ 651

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + Y  ++   C+      A  +  KM+     PN  T+++FI  L    R+D  +K+L +
Sbjct: 652 IVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSK 711

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +  C PN+  Y E++DGL ++ +  EA++L+ ++E+ G   N+VTY  ++ G  ++G 
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +  +L   M  +G   + IT+ ++I   C  G ++ A +LLD ++    W   I+S+ 
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK-QTYWPKHILSHR 830

Query: 521 SLLWGI 526
            ++ G 
Sbjct: 831 KIIEGF 836



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 247/520 (47%), Gaps = 25/520 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D    ++ +M  +G    +  +  VI         E+A  +F  ++  G+ P+V  Y 
Sbjct: 440 KFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYT 499

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D+             +  M   G  PNV TY  L+ A  K  ++  A +L   M  +
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF---------------------GSGVSVY 168
           GC P+ V+YT ++   CK GQ+E+A ++  R                      G  V  Y
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
            AL++GLCK ++++EA  LL  M+  G +PN I Y  +I   C +G ++ +  +  +M  
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG +PN+++++S +       R      + ++M+     PNVV Y+ ++ GLC  G  DE
Sbjct: 680 RGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDE 739

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +  +MEE  C PNV TY+A+IDGF K+G +    +++  M S GC+PN + Y  ++ 
Sbjct: 740 AYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLIN 799

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C N +  +A+ L+++M     P + ++    I+G         ++ LLD++ + E +P
Sbjct: 800 HCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVP 857

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL--NIVTYNTILHGVCRAGMVVEAFQ 466
             + Y  L+D  ++  R++ A +L+ EI         N   Y +++  +  A  V +A +
Sbjct: 858 VDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALE 917

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           L   M+ +    +      +I    K  K   A+QL D I
Sbjct: 918 LYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSI 957



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 174/635 (27%), Positives = 293/635 (46%), Gaps = 103/635 (16%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE--------------------NRF 81
           R G    AL+   R+++FG KP+   YN ++   L                      +R+
Sbjct: 188 RNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRY 247

Query: 82  SMINPIYSNMK----RDGME---------PNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           ++    YS  K    R+  +         P+   YN ++  LC+ +  + A  +L  M +
Sbjct: 248 TLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRS 307

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEE-ARELAMRFGSGV----SVYNALINGLCKEHKIEE 183
             C P+ V+Y  ++S   + GQ+    R L+M    G      ++N+LI+  CK      
Sbjct: 308 SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSY 367

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLC--------DVGN-VETSLGILGQMFVRGCNPN 234
           A+ L  +M+  G  P  + Y+  I S+C        D+ + VE +   +  + V     N
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVN 427

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +F   L G    G+  +A  +   M+ +GF+P+   YS +I  LC    +++A S+  
Sbjct: 428 VSNFARCLCG---AGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFE 484

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+ N   P+V TY+ LID F KAG +  A + ++ M+  GC+PNVV YT ++    +  
Sbjct: 485 EMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAK 544

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK---------QYE 405
               A  L E M  E C PN VT+   I G C  G+++ A ++  +M+         +Y 
Sbjct: 545 QMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYF 604

Query: 406 CL-------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            L       PN+ TY  L+DGL + NRVKEA EL+  +   G + N + Y+ ++ G C+ 
Sbjct: 605 KLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKI 664

Query: 459 GMVVEAFQLLGKM------------------LIEGTKLDAI------------TFNIIIY 488
           G + +A ++  KM                  L +  +LD +            T N++IY
Sbjct: 665 GKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIY 724

Query: 489 A-----YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
                  CK GK + A +L+ ++   G  NP++++YT+++ G   SG +++     + M 
Sbjct: 725 TEMVDGLCKIGKTDEAYKLMLKMEEKG-CNPNVVTYTAMIDGFGKSGKIEQCLELFRDMC 783

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           ++G  PNF T+ VL+    SN G L   Y L D M
Sbjct: 784 SKGCAPNFITYRVLINHCCSN-GLLDEAYKLLDEM 817



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 213/491 (43%), Gaps = 94/491 (19%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+   C+      A   L  + D G  P+  TY+ +I        ++T+  +  +M  
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
                + ++ +        GG+  EA DL +    E F+P+ V Y+ ++ GLC     +E
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ + ++M  +SC PNV TY  L+ G  + G L    +I + MI+ GC PN   +  ++ 
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI-------------------------- 382
             C++  +  A+ L +KM    C P  + +N FI                          
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEML 417

Query: 383 ---------------KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                          + LCG G+ D A K++ +M     +P+ +TY++++  L   ++V+
Sbjct: 418 DLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVE 477

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF---------------------- 465
           +AF L  E+++ GI  ++ TY  ++   C+AG++ +A                       
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALI 537

Query: 466 -------------QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
                        +L   ML+EG K + +T+  +I  +CK G++  A Q+  R+RG  E 
Sbjct: 538 HAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIES 597

Query: 513 N---------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +               P++I+Y +L+ G+C +  ++EA   L  ML  G  PN   ++ +
Sbjct: 598 SDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAV 657

Query: 558 VRSLFSNLGHL 568
           +   F  +G L
Sbjct: 658 IDG-FCKIGKL 667


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 263/510 (51%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  N+   N LL+  C+  R D A 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY+ ++ S+C  G+  +A +L      G       V  YN +I
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  KE  + +A  L  EMV RGI P+++TY++++ +LC    ++ +   L QM  +   
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN  ++ +L+ GY   G+  EA  ++  M R   LP+VV  S L+  LC  G + EA  V
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P+V +Y+ +++G+A  G L+  + +++ M+ +G +P+   +  ++K    
Sbjct: 360 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYAN 419

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      P+ VT+ T I  LC  G++D AM+  +QM      P+   
Sbjct: 420 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 479

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN L+ G      + +A EL++EI   G+ L+IV +++I++ +C+ G V++A  +    +
Sbjct: 480 YNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTV 539

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   DA+ +++++  YC  GK+  A+++ D +   G   P+++ Y +L+ G C  G +
Sbjct: 540 NVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNVVVYCTLVNGYCKIGRI 598

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML  GI P+   +++++  LF
Sbjct: 599 DEGLSLFREMLQRGIKPSTILYSIIIDGLF 628



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 263/566 (46%), Gaps = 44/566 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R    E AL  F ++   GL+  + I NH+L+      R    ++ +       G  P+V
Sbjct: 136 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 195

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEA---- 154
           F+Y+ILLK+LC   +   A  LL  M   G  C+P+ V+Y T++    K G V +A    
Sbjct: 196 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 255

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN-------------- 199
           +E+  R     +  YN++++ LCK   +++A   L +MV++ + PN              
Sbjct: 256 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 315

Query: 200 ---------------------VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
                                V+T S ++ SLC  G ++ +  +   M ++G NP++ S+
Sbjct: 316 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             +L GY   G   + +DL++ M+ +G  P+   ++ LI    + G +D+A+ +  +M +
Sbjct: 376 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRD 435

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+V TY  +I    + G +  A + +N+MI  G +P+  AY C+++  C +    +
Sbjct: 436 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLK 495

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  LI ++       + V F++ I  LC  GRV  A  + D        P+   Y+ L+D
Sbjct: 496 AKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMD 555

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G   V ++++A  +   +   GI+ N+V Y T+++G C+ G + E   L  +ML  G K 
Sbjct: 556 GYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKP 615

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             I ++III    + G+   A      +   G    DI +Y  +L G+  +    EA   
Sbjct: 616 STILYSIIIDGLFQAGRTVPAKMKFHEMTESG-IAMDICTYNIVLRGLFKNRCFDEAIFL 674

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSN 564
            +++    +  N  T N ++  +F  
Sbjct: 675 FKELRAMNVKINIITLNTMIDGMFQT 700



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 265/555 (47%), Gaps = 8/555 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P +  YN ++ A
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L               M    + PN +TYN L+       +   A ++  EM      PD
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 336

Query: 135 AVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+ + ++ S+CK G+++EAR+    +AM+     V  YN ++NG   +  + +   L  
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M+  GI P+  T++ +I +  + G ++ ++ I  +M   G  P++ ++ +++      G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A + +N+MI +G  P+  AY+ LI G C++GS+ +A  +  ++  N    ++  +S
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 516

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+   K G ++ A  I++  ++ G  P+ V Y+ ++   C      +A  + + M   
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN V + T + G C  GR+D  + L  +M Q    P+   Y+ ++DGL +  R   A
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                E+ + GI ++I TYN +L G+ +     EA  L  ++     K++ IT N +I  
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +V  A  L   I       P++++Y+ ++  +   G ++EA      M N G  P
Sbjct: 697 MFQTRRVEEAKDLFASI-SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 755

Query: 550 NFATWNVLVRSLFSN 564
           N    N +VR L   
Sbjct: 756 NSRLLNHVVRELLKK 770



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 242/467 (51%), Gaps = 5/467 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G  ++A  +F  +   G  P V  YN +L+    +     +  ++  M  DG+ P+ +
Sbjct: 349 KYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFY 408

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMR 160
           T+N+L+KA      +D A  +  EM + G  PD V+Y T+++++C++G++++A E     
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GV+     YN LI G C    + +A  L+ E+++ G+  +++ +S+II++LC +G V
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  I       G +P+   ++ L+ GY L G+  +A  +++ M+  G  PNVV Y TL
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++G C  G +DE +S+  +M +    P+   YS +IDG  +AG  + A   ++ M  +G 
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + ++  Y  +++ L +N  F +A  L +++   N   N +T NT I G+    RV+ A  
Sbjct: 649 AMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKD 708

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L   + +   +PN+ TY+ ++  L++   V+EA ++ + ++  G + N    N ++  + 
Sbjct: 709 LFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELL 768

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   +V A   L K+      L+ +T  +++  +  +G     I+ L
Sbjct: 769 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 198/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   NI     LL+G+    RT E
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +YS L+  LC  G   +A  +   M E    C PNV  Y+ 
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G++  A  ++  M+  G  P++V Y  +V  LC+     +A + + +M  + 
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+N  I G    G+   A+++  +M+++  LP++ T + L+  L +  ++KEA 
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   ++ +YN +L+G    G +V+   L   ML +G   D  TFN++I AY
Sbjct: 358 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAY 417

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   PD+++Y +++  +C  G M +A     +M+++G+ P+
Sbjct: 418 ANCGMLDKAMIIFNEMRDHG-VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 476

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              +N L++   ++   L    ++ +IM N
Sbjct: 477 KYAYNCLIQGFCTHGSLLKAKELISEIMNN 506



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 5/327 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV+  +  +  +I  +   G   +A ++   I   G+   +  ++
Sbjct: 457 KMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 516

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G+ P+   Y++L+   C   +++ A ++   M + 
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  R       +Y+ +I+GL +  +   A
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  ++ TY+ ++  L      + ++ +  ++       NI +  +++ G
Sbjct: 637 KMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDG 696

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+  + R   +PNVV YS +I  L   G ++EA  +   M+   C PN
Sbjct: 697 MFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 756

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM 331
               + ++    K   ++ A    +++
Sbjct: 757 SRLLNHVVRELLKKNEIVRAGAYLSKI 783


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 281/557 (50%), Gaps = 5/557 (0%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D    +  +M   GV+         I S+   G    AL++   + E G       Y  +
Sbjct: 27  DQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTV 86

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +  L A         ++  M R  + P+V T+N +L ALC+   +  +  LL ++  +G 
Sbjct: 87  VRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGM 146

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS----GVSVYNALINGLCKEHKIEEAFWL 187
           + +  +    +  +C+ G++EEA  L     +     V  YN L+ GLCK+ K++EA   
Sbjct: 147 SVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQY 206

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L  M+++G  P+  TY+TII   C    ++ +  +L     +G  P+  ++ SL+ G   
Sbjct: 207 LRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCA 266

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G    A +L+N    +   P++V Y++L+ GLC  G +  A+ V  +M E+ C P++ T
Sbjct: 267 EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ +I+G  K GN+  A+ + N  I  G  P+V  +  M+   C+      A  L+E+M 
Sbjct: 327 YNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMW 386

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                P+ +T+N+ + GLC  G+     +  ++M    C PN  TYN L++   ++N+++
Sbjct: 387 MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLE 446

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA  ++  + + G+  + +++NT++HG CR G +  A+ L  K+  +G    A TFNI+I
Sbjct: 447 EASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            AY  +  +  A ++   +   G + PD+ +Y  L+ G C +  +  A+++L +M+++G 
Sbjct: 507 GAYSSKLNMQMAEKIFGEMISKG-YKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGF 565

Query: 548 CPNFATWNVLVRSLFSN 564
            P+ AT+  ++ SL  N
Sbjct: 566 VPSMATFGRVLNSLAMN 582



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 265/539 (49%), Gaps = 9/539 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ +   G       + +V+      G    A  +F  +    + P V  +N++L AL 
Sbjct: 67  LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        + + + + GM  N FT NI ++ LC+  R++ A   LVE  +   APD V
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVA-LVESMDAYIAPDVV 185

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +CK  +V+EA +   R  +   +     YN +I+G CK   ++EA  LL + 
Sbjct: 186 TYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDA 245

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G  P+ +TY ++I+ LC  G+VE +L +  +   +   P++  + SL+KG    G  
Sbjct: 246 IFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLI 305

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  + N M+ +G  P++  Y+ +I+GLC  G++ +A  V          P+V T++ +
Sbjct: 306 LHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTM 365

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+ K   L  A Q+  RM   G +P+ + Y  ++  LC+     + +   E+M  + C
Sbjct: 366 IDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGC 425

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +T+N  I+  C   +++ A  ++ +M Q   +P+  ++N L+ G  R   +  A+ 
Sbjct: 426 RPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYL 485

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  ++++ G      T+N ++        +  A ++ G+M+ +G K D  T+ +++   C
Sbjct: 486 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSC 545

Query: 492 KQGKVNNA-IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           K   V+ A + L + +  G  + P + ++  +L  +  +  + EA   +  M+  G+ P
Sbjct: 546 KAANVDRAYVHLAEMVSKG--FVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 221/433 (51%), Gaps = 37/433 (8%)

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               YNA+++ L      ++A  +   M+  G+ P+  T++  I S C  G    +L +L
Sbjct: 9   AAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLL 68

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             +  RGC+    ++ ++++G    G  ++A  L++ M+R    P+V  ++ ++H LC  
Sbjct: 69  RSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQK 128

Query: 284 GS-----------------------------------MDEAVSVSYQMEENSCPPNVTTY 308
           G                                    ++EAV++   M+     P+V TY
Sbjct: 129 GDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA-YIAPDVVTY 187

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + L+ G  K   +  A+Q   RM++ GC P+   Y  ++   C+ +M  +A  L++   F
Sbjct: 188 NTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIF 247

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+ VT+ + I GLC  G V+ A++L ++ +  +  P++  YN L+ GL R   +  
Sbjct: 248 KGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILH 307

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A +++ E+ + G   +I TYN +++G+C+ G + +A  ++   +++G   D  TFN +I 
Sbjct: 308 ALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMID 367

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            YCK+ K+++A+QL++R+   G   PD I+Y S+L G+C +G  +E     ++M+ +G  
Sbjct: 368 GYCKRLKLDSALQLVERMWMYG-IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426

Query: 549 PNFATWNVLVRSL 561
           PN  T+N+L+ + 
Sbjct: 427 PNAITYNILIENF 439



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 186/364 (51%), Gaps = 2/364 (0%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G  P    Y+ I+ +L +    + +  +  +M   G  P+  + T  +K + + GR H A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L   +   G     +AY T++ GL ++G   +A  +  +M      P+V T++ ++  
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             + G+++ +  +  +++  G S N       ++ LC+     +A +L+E M      P+
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAPD 183

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            VT+NT ++GLC   +V  A + L +M    C+P+  TYN ++DG  + + ++EA EL+ 
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           +    G   + VTY ++++G+C  G V  A +L  +   +  K D + +N ++   C+QG
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            + +A+Q+++ +   G  +PDI +Y  ++ G+C  G + +A + +   + +G  P+  T+
Sbjct: 304 LILHALQVMNEMVEDG-CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 362

Query: 555 NVLV 558
           N ++
Sbjct: 363 NTMI 366



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 167/336 (49%), Gaps = 2/336 (0%)

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M + GC P   ++ +++   +      +A  ++ RM+  G  P+   ++  I   C  G 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
              A+ +   + E  C      Y  ++ G    G+   A  +++ M+     P+V  +  
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LCQ     ++ +L+ K+       N  T N +I+GLC  GR++ A+ L++ M  Y 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY- 179

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P++ TYN L+ GL + ++V+EA + +  +   G   +  TYNTI+ G C+  M+ EA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +LL   + +G   D +T+  +I   C +G V  A++L +  +   +  PD++ Y SL+ G
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQ-AKDLKPDLVVYNSLVKG 298

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +C  G +  A   + +M+ +G  P+  T+N+++  L
Sbjct: 299 LCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGL 334


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/549 (28%), Positives = 275/549 (50%), Gaps = 11/549 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+ +G   SEG F SVI +  + G   +AL++   +   G++  V +   ++    
Sbjct: 301 LLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYC 360

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +++       +  M  +G  PN  TY +L++  CKN  +  AY L  +M NK   P   
Sbjct: 361 KQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVF 420

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVS-------VYNALINGLCKEHKIEEAFWLLC 189
              +++    K+   EEA +L   F   V+        YN+L++ LCKE K+ EA  L  
Sbjct: 421 IVNSLIRGFLKVESREEASKL---FDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQ 477

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M+D+G+ P  ++Y+++I   C  GN++ +  +   M   G  PN+ +++ L+ GY   G
Sbjct: 478 KMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNG 537

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            T  A  +++RM+ E  +P+   Y+  I+GLC  G   EA  +  +  E    P   TY+
Sbjct: 538 DTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYN 597

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +++DGF K G++  A   +  M  +G SPNV+ YT ++   C+NN    A  +  +M  +
Sbjct: 598 SIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNK 657

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               +   +   I G C    ++ A  L  ++      PN   YN L+ G   +N ++ A
Sbjct: 658 GLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAA 717

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L   +   GI  ++ TY T++ G+ + G +V A  L  +M  +G   D I + ++I  
Sbjct: 718 LNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLING 777

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            C +G++ NA ++L  +       P++  Y +L+ G   +G +QEAF    +ML++G+ P
Sbjct: 778 LCGKGQLENAQKILAEMERDS-ITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTP 836

Query: 550 NFATWNVLV 558
           N  T+++L+
Sbjct: 837 NDTTYDILI 845



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/571 (26%), Positives = 266/571 (46%), Gaps = 42/571 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++  ++NSY +      A+  F R+ E  + P +K  N +L AL+  +       +Y  M
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKM 235

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+  + FT +I+++A  K+N  + A K  +E  ++G   DA +Y+ ++ + CK   V
Sbjct: 236 VLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDV 295

Query: 152 EEAREL-------------------------------AMRFGS---------GVSVYNAL 171
           E A  L                               A+R             V V   L
Sbjct: 296 ELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTL 355

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + G CK+ K+  A     +M + G  PN +TY+ +I   C  GN+  +  +  QM  +  
Sbjct: 356 VKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNI 415

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P +    SL++G+L      EAS L++  +    + N+  Y++L+  LC  G M EA +
Sbjct: 416 CPTVFIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLLSWLCKEGKMSEATT 474

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M +    P   +Y+++I G  + GNL  A+ +++ M+  G  PNV+ Y+ ++    
Sbjct: 475 LWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYF 534

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +N     A  + ++M  EN  P+  T+N  I GLC  GR   A  +L +  +   +P   
Sbjct: 535 KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCL 594

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN ++DG ++   V  A     E+ + G+  N++TY T+++G C+      A ++  +M
Sbjct: 595 TYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEM 654

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
             +G +LD   +  +I  +CK+  +  A  L   +  GG  +P+ + Y SL+ G  N   
Sbjct: 655 RNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGG-LSPNSVIYNSLISGYRNLNN 713

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           M+ A    ++ML EGI  +  T+  L+  L 
Sbjct: 714 MEAALNLQKRMLGEGISCDLQTYTTLIDGLL 744



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 165/332 (49%), Gaps = 30/332 (9%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           Y+  +M  E +  S+  +   IN   +VG   +A  M  +  E G  P    YN I+D  
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF 603

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           + E   S     Y  M   G+ PNV TY  L+   CKNN  D A K+  EM NKG   D 
Sbjct: 604 IKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDI 663

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
            +Y  +                              I+G CK+  IE A WL  E++D G
Sbjct: 664 AAYGAL------------------------------IDGFCKKQDIETASWLFSELLDGG 693

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PN + Y+++IS   ++ N+E +L +  +M   G + ++ ++T+L+ G L  GR   A 
Sbjct: 694 LSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLAL 753

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           DL++ M  +G +P+++ Y+ LI+GLC  G ++ A  +  +ME +S  PNV  Y+ALI G 
Sbjct: 754 DLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGH 813

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            KAGNL  A ++ N M+  G +PN   Y  ++
Sbjct: 814 FKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 197/402 (49%), Gaps = 4/402 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F S + +YN L+N   K +K+ +A      +V+  I P +   + ++++L     +  + 
Sbjct: 170 FDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAR 229

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  +M ++G + +  +   +++  L      EA   +      G   +  AYS +I   
Sbjct: 230 EVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAF 289

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C N  ++ A  +   M +    P+  T++++I    K GN++ A ++ + M+S G   NV
Sbjct: 290 CKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNV 349

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP-PNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  T +VK  C+ +    A    +KM  EN P PN VT+   I+  C  G +  A  L  
Sbjct: 350 VVATTLVKGYCKQDKLVSALEFFDKMN-ENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYT 408

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           QMK     P +   N L+ G L+V   +EA +L  E   C I  NI TYN++L  +C+ G
Sbjct: 409 QMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEG 467

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA  L  KML +G     +++N +I  +C+QG ++ A  +   +   G   P++I+Y
Sbjct: 468 KMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG-LKPNVITY 526

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + L+ G   +G  + AF    +M++E I P+  T+N+ +  L
Sbjct: 527 SILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGL 568



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 140/338 (41%), Gaps = 39/338 (11%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R  F  ++  Y+ L++       +++A+    ++ E+   P +   + L+    K   + 
Sbjct: 167 RFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIY 226

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A +++ +M+  G   +      M++   ++N   +A     +        +   ++  I
Sbjct: 227 EAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVI 286

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           +  C    V+ A  LL  M+    +P+  T+  ++   ++   + EA  L  E+  CG+Q
Sbjct: 287 QAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQ 346

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +N+V   T++ G C+   +V A +   KM   G   + +T+ ++I   CK G +  A  L
Sbjct: 347 MNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDL 406

Query: 503 LDR----------------IRGGGEWN-----------------PDIISYTSLLWGICNS 529
             +                IRG  +                    +I +Y SLL  +C  
Sbjct: 407 YTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKE 466

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
           G M EA    QKML++G+ P   ++N ++      LGH
Sbjct: 467 GKMSEATTLWQKMLDKGLAPTKVSYNSMI------LGH 498



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 30/215 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +K +I+   +L  ++   G+S +  ++ S+I+ YR +   E AL +  R+   G
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   ++ Y  ++D LL E R  +   +YS M   G+ P++  Y +L+  LC   +++ A 
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQ 788

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K+L EM      P+   Y                              NALI G  K   
Sbjct: 789 KILAEMERDSITPNVPIY------------------------------NALIAGHFKAGN 818

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           ++EAF L  EM+D+G+ PN  TY  +I+     GN
Sbjct: 819 LQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 73/148 (49%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M  EG+SC    + ++I+   + G    AL ++  +   G+ P + IY  +++ L 
Sbjct: 720 LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLC 779

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      I + M+RD + PNV  YN L+    K   +  A++L  EM +KG  P+  
Sbjct: 780 GKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDT 839

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG 164
           +Y  +++   K G       L+++F  G
Sbjct: 840 TYDILINGKIKGGNSALKSLLSLKFKDG 867


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/547 (28%), Positives = 267/547 (48%), Gaps = 31/547 (5%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
            V   ++++Y++ G    A ++   + + GL PT +  N +L  LL  +   ++  +   
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGF 235

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+  G+ P+V+TY+  L+A CK    D A K+  EM  + CA + V+Y            
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY------------ 283

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                             N +I+GLC+   +EEAF    EMVD G+ P+  TY  +++ L
Sbjct: 284 ------------------NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 325

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G ++ +  +L +M   G  PN+  + +L+ G++  G+  EA D+ N MI  G  PN 
Sbjct: 326 CKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNK 385

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + Y  LI GLC  G +  A  +  +M +    P+  TY  L+ G  +  +  GA ++ N 
Sbjct: 386 IMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNE 445

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M ++G  PN   Y  M+  LCQN    +A +L+E+M  E   PN   +   I G    G 
Sbjct: 446 MRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGH 505

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A + L+ M +   LP++  YN L+ GL  V R++EA E   +++K G+  +  TY+ 
Sbjct: 506 ISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSG 565

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++HG C+   + +A QLL +ML  G K +A T+  ++  Y K         +L  + G G
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGP 570
           +  PD   Y  ++  +  S  M+ AF+ L ++   G+ P+   ++ L+  L         
Sbjct: 626 D-KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKA 684

Query: 571 VYILDDI 577
           V +LD++
Sbjct: 685 VGLLDEM 691



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 148/577 (25%), Positives = 279/577 (48%), Gaps = 8/577 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D  + + ++M+    + +E  +  +I+   R G  E+A      + ++GL P    Y 
Sbjct: 260 DFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYG 319

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L    R      +   M   G++PNV  Y  L+    K  +   A+ +L EM + 
Sbjct: 320 ALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA 379

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEA 184
           G  P+ + Y  ++  +CK+GQ+  A +L    ++ G       Y+ L+ G  + +  + A
Sbjct: 380 GVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGA 439

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F LL EM + GI PN  TY  +I+ LC  G  + +  +L +M   G  PN   +  L+ G
Sbjct: 440 FELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G    A +    M +   LP++  Y++LI GL + G ++EA     Q+++    P+
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TYS LI G+ K  NL  A Q+  +M+++G  PN   YT +++   ++N   +  S+++
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M      P+   +   I+ L     ++ A  +L ++++   +P++  Y+ L+ GL ++ 
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMA 679

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +++A  L+ E+ K G++  IV YN ++ G CR+G +  A  +   +L +G   + +T+ 
Sbjct: 680 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYT 739

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I   CK G + +A  L   +   G   PD   Y  L  G  ++  +++A    ++M N
Sbjct: 740 ALIDGNCKNGDITDAFDLYKDMLDRG-IAPDAFVYNVLATGCSDAADLEQALFLTEEMFN 798

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G   + + ++ LVR  F   G L     L  +M ++
Sbjct: 799 RGYA-HVSLFSTLVRG-FCKRGRLQETEKLLHVMMDR 833



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 233/517 (45%), Gaps = 39/517 (7%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+   +  L  +LC  +    A  LL +M      P       +++SI +  Q  +AR  
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHP-----PLVLASIQRAIQDSDARSP 167

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           +       +V + L++   K   +  A  ++  M D G+ P     + ++  L     +E
Sbjct: 168 SPSPSHSTAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAME 227

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
               + G M   G  P+++++++ L+ +        A  ++  M R     N V Y+ +I
Sbjct: 228 LVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMI 287

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLC +G+++EA     +M +    P+  TY AL++G  K G L  A  + + M  +G  
Sbjct: 288 SGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLK 347

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV Y  +V    +     +A  ++ +M      PN + ++  I+GLC  G++  A KL
Sbjct: 348 PNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKL 407

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L++M +    P+  TY+ L+ G  +      AFEL+ E+   GI  N  TY  +++G+C+
Sbjct: 408 LNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQ 467

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD------------- 504
            G   EA  LL +M+ EG K +A  +  +I  + K+G ++ A + L+             
Sbjct: 468 NGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFC 527

Query: 505 ------------RIRGGGEWN---------PDIISYTSLLWGICNSGGMQEAFIYLQKML 543
                       RI    E+          PD  +Y+ L+ G C +  +++A   LQ+ML
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML 587

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           N G+ PN  T+  L+   F +  H     IL  ++ +
Sbjct: 588 NSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS 624



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/534 (22%), Positives = 223/534 (41%), Gaps = 109/534 (20%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL +M   G+  +  V+ ++++ + + G A +A  +   +   G++P   +Y++++ 
Sbjct: 334 AKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIR 393

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    +    + + + M + G  P+ FTY+ L++   ++   DGA++LL EM N G  P
Sbjct: 394 GLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILP 453

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS------------------------------ 163
           +A +Y  +++ +C+ G+ +EA  L     S                              
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513

Query: 164 ----------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                      +  YN+LI GL    +IEEA     ++  RG+ P+  TYS +I   C  
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKT 573

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI----------- 262
            N+E +  +L QM   G  PN  ++T LL+GY       + S +   M+           
Sbjct: 574 RNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIY 633

Query: 263 ------------------------REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                                   + G +P++  YS+LI GLC    M++AV +  +M +
Sbjct: 634 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAK 693

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P +  Y+ALIDGF ++G++  A  +++ +++ G  PN V YT ++   C+N     
Sbjct: 694 EGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITD 753

Query: 359 AHSLIEKMAFENCPPNTVTFN----------------------------------TFIKG 384
           A  L + M      P+   +N                                  T ++G
Sbjct: 754 AFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRG 813

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            C  GR+    KLL  M   E +PN  T   ++    +  ++ EA  +  E+++
Sbjct: 814 FCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 199/422 (47%), Gaps = 6/422 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  E      LL++M  EG+  +  ++  +I  + + G    A +    + +  
Sbjct: 461 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKAN 520

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++  L    R       Y+ +++ G+ P+ FTY+ L+   CK   ++ A 
Sbjct: 521 VLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKAD 580

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           +LL +M N G  P+A +YT ++    K    E+    L    GSG      +Y  +I  L
Sbjct: 581 QLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNL 640

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +E AF +L E+   G+ P++  YS++IS LC + ++E ++G+L +M   G  P I
Sbjct: 641 SRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGI 700

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + +L+ G+   G    A ++++ ++ +G LPN V Y+ LI G C NG + +A  +   
Sbjct: 701 VCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKD 760

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+ L  G + A +L  A  +   M + G + +V  ++ +V+  C+   
Sbjct: 761 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGR 819

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +   L+  M      PN  T    I      G++  A ++  +++Q +   + T    
Sbjct: 820 LQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFS 879

Query: 416 LL 417
           LL
Sbjct: 880 LL 881


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/443 (32%), Positives = 243/443 (54%), Gaps = 10/443 (2%)

Query: 134 DAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           DAVSY T+++++C+ G   +A     R +A         Y  L+  LC E +  +A  LL
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M   G+ P+V+TY T+I  LCD  +V+ ++ +L +M   G  PN+  ++ LL+GY   
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR    S ++  M   G  P+VV Y+ LI  LC  G + +A  V  +M E    PNV TY
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LI+   K G++  A  + N M+  G + + V Y  ++  L       +A  L+E+M  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 369 ENC--PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 PN VTFN+ I GLC  GR+  A ++ D M +  C  N+ T+N L+ GLLRV++V
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           K+A EL+ E+   G++ +  TY+ +++G C+   V  A  LL KM  +G + + + +  +
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           + A C+QG +  A    D +    +   D+++Y++++ G C     + A  +L+ ML+EG
Sbjct: 437 LAALCEQGMMEQARNFFDEMHKNCKL--DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 547 ICPNFATWNVLVRSLFSNLGHLG 569
           + P+  T+++L+ ++F+N G LG
Sbjct: 495 LIPDSVTYSMLI-NMFANSGDLG 516



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 239/469 (50%), Gaps = 11/469 (2%)

Query: 99  NVFTYNILLKALCKNNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           +  +YN +L ALC+    +D A  LL  M ++   P AVSYTT++ ++C   +  +A  L
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQAVGL 135

Query: 158 AMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                 SGV      Y  LI GLC    +++A  LL EM + GI+PNV+ YS ++   C 
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  E    +  +M  RG  P++  +T L+      G+  +A+ + ++M+  G  PNVV 
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ +C  GS+ EA+S+   M E     +  TY+ LI G +    +  A  +   MI
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 333 --SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
                  PNVV +  ++  LC+     QA  + + MA   C  N VTFN  I GL    +
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V  AM+L+D+M      P+  TY+ L++G  ++ +V  A  L++++ + GI+  +V Y  
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L  +C  GM+ +A     +M  +  KLD + ++ +I+  C+     +A + L  +   G
Sbjct: 436 LLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              PD ++Y+ L+    NSG +  A   L++M   G  P+ A ++ L++
Sbjct: 495 -LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIK 542



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 239/476 (50%), Gaps = 8/476 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +V+ +  R G    A     R+     +PT   Y  ++ AL AE R      +  +M+  
Sbjct: 83  TVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQAS 142

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE-E 153
           G+ P+V TY  L++ LC    VD A +LL EM   G  P+ V Y+ ++   CK G+ E  
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECV 202

Query: 154 ARELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           ++      G G+     +Y  LI+ LC+E K+++A  ++ +M++RG++PNV+TY+ +I+S
Sbjct: 203 SKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINS 262

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL-- 267
           +C  G+V+ ++ +   M  +G   +  ++ +L+ G        EA  L   MI    +  
Sbjct: 263 MCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVE 322

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNVV ++++IHGLC  G M +A  V   M EN C  N+ T++ LI G  +   +  A ++
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMEL 382

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            + M S+G  P+   Y+ ++   C+     +A SL+ KM  +   P  V +   +  LC 
Sbjct: 383 MDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCE 442

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G ++ A    D+M +  C  ++  Y+ ++ G  R+   K A E +  +   G+  + VT
Sbjct: 443 QGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVT 501

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           Y+ +++    +G +  A ++L +M   G   D   F+ +I  Y  +G     ++L+
Sbjct: 502 YSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELI 557



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 239/486 (49%), Gaps = 15/486 (3%)

Query: 11  IDGVQYLLQQMKVEG--VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           +D   +LL+ M  E    + S    +  + + RR G   QA+ +   ++  G++P V  Y
Sbjct: 95  LDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTG---QAVGLLRDMQASGVRPDVVTY 151

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++  L           +   M   G+EPNV  Y+ LL+  CK  R +   K+  EM  
Sbjct: 152 GTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSG 211

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEE 183
           +G  PD V YT ++ S+C+ G+V++A ++    M  G    V  YN LIN +CKE  ++E
Sbjct: 212 RGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKE 271

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG---CNPNIHSFTS 240
           A  L   M+++G+  + +TY+T+I+ L  V  ++ ++G+L +M + G     PN+ +F S
Sbjct: 272 AMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM-IHGETMVEPNVVTFNS 330

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++ G    GR  +A  + + M   G   N+V ++ LI GL     + +A+ +  +M  + 
Sbjct: 331 VIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSG 390

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  TYS LI+GF K   +  A  + ++M  +G  P +V Y  ++  LC+  M  QA 
Sbjct: 391 LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQAR 450

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +  ++M  +NC  + V ++T I G C       A + L  M     +P+  TY+ L++  
Sbjct: 451 NFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMF 509

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                +  A  ++ ++   G   ++  +++++ G    G   +  +L+ +M  +   LD+
Sbjct: 510 ANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDS 569

Query: 481 ITFNII 486
              + I
Sbjct: 570 KIISTI 575



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 227/467 (48%), Gaps = 13/467 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D    LL++M   G+  +  V+  ++  Y + G  E   K+F  +   G
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V +Y  ++D+L  E +      +   M   G+EPNV TYN+L+ ++CK   V  A 
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALIN 173
            L   M  KG A DAV+Y T+++ +  + +++EA  L      G       V  +N++I+
Sbjct: 274 SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  ++ +AF +   M + G   N++T++ +I  L  V  V+ ++ ++ +M   G  P
Sbjct: 334 GLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEP 393

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +++ L+ G+    +   A  L ++M R+G  P +V Y  L+  LC  G M++A +  
Sbjct: 394 DSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFF 453

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +N C  +V  YS +I G  +  +   A +    M+  G  P+ V Y+ ++ +   +
Sbjct: 454 DEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANS 512

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  ++++M      P+   F++ IKG    G  +  ++L+ +M   +   +    
Sbjct: 513 GDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKII 572

Query: 414 NELLDGLLRVNRVKEAFELV----TEIEKCGIQLNIVTYNTILHGVC 456
           + +   L+  N  K   + V    TE+ K G  ++      +LH +C
Sbjct: 573 STIYTCLVANNEGKALLQSVPGFDTEVSK-GAVISSHELTNMLHKLC 618


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 254/500 (50%), Gaps = 8/500 (1%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           G + +L+ M   G+  S   F  V+ SY R G    AL++   +++ G++P + I N  +
Sbjct: 214 GARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTI 273

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
             L+   +          M+  G++P++ TYN L+K  C  NR++ A +L+  + +KGC 
Sbjct: 274 YVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCP 333

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFW 186
           PD VSY T++  +CK  ++E+ + L  +     ++      YN LI+ L K    ++A  
Sbjct: 334 PDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALA 393

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L E  D+G   + + YS I+ S C  G ++ +  ++  M+ R CNP++ ++T+++ G+ 
Sbjct: 394 FLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFC 453

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  EA  +  +M + G  PN V+Y+ L++GLC +G   EA  +    EE+   PN  
Sbjct: 454 RLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI 513

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY  ++ GF + G L  A  +   M+  G  P  V    +++ LCQN    +A   +E+ 
Sbjct: 514 TYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC 573

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             + C  N V F T I G C  G ++ A+ +L+ M      P+  TY  L D L +  R+
Sbjct: 574 LNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRL 633

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA EL+ ++   G+    VT+ +++H  C+ G V +   LL +M+    K     +N +
Sbjct: 634 DEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMV--KRKPFRTIYNHV 691

Query: 487 IYAYCKQGKVNNAIQLLDRI 506
           I   C  G +  A +LL ++
Sbjct: 692 IEKLCDFGNLEEAEKLLGKV 711



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 139/319 (43%), Gaps = 40/319 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID  + +LQQM   G   +   + +++N     G + +A +M     E    P    Y 
Sbjct: 457 RIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG 516

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E + S    +   M   G  P     N+L+++LC+N +V  A K L E  NK
Sbjct: 517 VVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNK 576

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE------LAMRFGSGVSVYNALINGLCKEHKIEE 183
           GCA + V++TT++   C++G +E A        L+ +    V+ Y AL + L K+ +++E
Sbjct: 577 GCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVT-YTALFDALGKKGRLDE 635

Query: 184 AFWLLCEMVDRGIDPNVIT---------------------------------YSTIISSL 210
           A  L+ +M+ +G+DP  +T                                 Y+ +I  L
Sbjct: 636 AAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFRTIYNHVIEKL 695

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           CD GN+E +  +LG++       + ++   L++  L  G    A  +  +M R    P++
Sbjct: 696 CDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDL 755

Query: 271 VAYSTLIHGLCSNGSMDEA 289
                +   L  +G++ EA
Sbjct: 756 KLCEKVTKKLVLDGNLVEA 774



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 3/182 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +  +M      P+  TY  L  AL K  R+D A +L+V+M +KG  P  V++ +++   C
Sbjct: 604 VLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYC 663

Query: 147 KLGQVEEARELAMRF---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           + G+V++   L  R        ++YN +I  LC    +EEA  LL +++      +  T 
Sbjct: 664 QWGRVDDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTC 723

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
             ++ S    G   ++  +  QMF R   P++     + K  +L G   EA  L  R + 
Sbjct: 724 HVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVE 783

Query: 264 EG 265
            G
Sbjct: 784 RG 785



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 2/161 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           + + LG+K  +D    L+ +M  +G+  +   F SVI+ Y + G  +  L +  R+    
Sbjct: 623 LFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRM--VK 680

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP   IYNH+++ L           +   + R   + +  T ++L+++  K      AY
Sbjct: 681 RKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAY 740

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           K+  +M  +   PD      +   +   G + EA +L +RF
Sbjct: 741 KVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRF 781


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/488 (31%), Positives = 244/488 (50%), Gaps = 9/488 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G+  +   F  V+ SY R G    A+++   +++ G++P + + N  +  L+  N     
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                 M+  G+ PNV TYN L+K  C  +RV+ A +L+ EM  KGC+PD VSY T++  
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +CK  ++ E  ++       +  +    YN LI+ LCK    +EA   L E   RG   +
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            + YS I+ S C  G ++ +  I+ +MF RGC P++ ++T+++ G+   G   +A  +  
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           +M + G  PN V+Y+  + GLC  G+  EA  +    EE    PN  TYS ++ GF + G
Sbjct: 353 QMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREG 412

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L  A  +   MI  G  P  V    +++ LC+     +A   +E+     C  N V F 
Sbjct: 413 KLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFT 472

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I   C    ++ A+ LLD M      P+  TY  ++D L +  R++EA EL  ++ K 
Sbjct: 473 TVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKK 532

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT-FNIIIYAYCKQGKVNN 498
           GI    VTY T++H   + G V +   LL KML   T+ +  T FN +I   C  G +  
Sbjct: 533 GIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKML---TRQECRTAFNQVIEKLCTFGNLEA 589

Query: 499 AIQLLDRI 506
           A +LL ++
Sbjct: 590 ADKLLGKV 597



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 242/474 (51%), Gaps = 10/474 (2%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRF 161
           Y ++L  L K     GA ++L  M  +G       +  ++ S  + G++  A + L M  
Sbjct: 86  YCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQ 145

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +G+     V N  I+ L   + +E+A   L  M   GI PNV+TY+ +I   CD+  VE
Sbjct: 146 KAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVE 205

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ ++ +M ++GC+P+  S+ +++       R  E  D+  +M     L + V Y+TLI
Sbjct: 206 DAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLI 265

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           H LC +   DEA+    + ++     +   YSA++D + K G +  A +I N M + GC 
Sbjct: 266 HMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCI 325

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+VV YT ++    Q     QA  ++++M    C PNTV++  F+KGLC  G    A ++
Sbjct: 326 PDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREM 385

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           +   ++    PN  TY+ ++ G  R  ++ +A ++V E+   G     V  N +L  +CR
Sbjct: 386 MKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCR 445

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G V EA + + + L  G  ++A+ F  +I+ +C+Q  +  A+ LLD +    + +PD +
Sbjct: 446 IGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNK-HPDAV 504

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           +YT+++  +   G ++EA     KML +GI P   T+    R++    G +G V
Sbjct: 505 TYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTY----RTVIHRYGQIGRV 554



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 134/319 (42%), Gaps = 40/319 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   + +LQQM   G   +   + + +    + G + +A +M     E    P    Y+
Sbjct: 343 EVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYS 402

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E + S    +   M   G  P     N+LL++LC+  RVD A K + E  N 
Sbjct: 403 VVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNM 462

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL------AMRFGSGVSVYNALINGLCKEHKIEE 183
           GCA +AV++TT++   C+   +E A  L      + +    V+ Y  +I+ L K+ +IEE
Sbjct: 463 GCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVT-YTTIIDALGKKGRIEE 521

Query: 184 AFWLLCEMVDRGIDPNVITYSTII---------------------------------SSL 210
           A  L  +M+ +GIDP  +TY T+I                                   L
Sbjct: 522 ATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKL 581

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  GN+E +  +LG++       + ++   L++ YL  G    A  +  RM     +P++
Sbjct: 582 CTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDL 641

Query: 271 VAYSTLIHGLCSNGSMDEA 289
                +   L   G  +EA
Sbjct: 642 KLCEKVCKKLMQEGKSEEA 660



 Score = 43.9 bits (102), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/161 (19%), Positives = 71/161 (44%), Gaps = 2/161 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+K  I+    L  +M  +G+  +   + +VI+ Y ++G  E  L +  ++    
Sbjct: 509 IIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM--LT 566

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +     +N +++ L         + +   + R     +  T ++L+++  +      AY
Sbjct: 567 RQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAY 626

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           K+   M ++   PD      +   + + G+ EEA  L +RF
Sbjct: 627 KVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRF 667


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 261/533 (48%), Gaps = 35/533 (6%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+  F R+      P+   +N +L ++      S +  +   M   G+ PN++T +IL+ 
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVY 168
           + C  NRV  A+ +L ++   G  PD  ++TT                            
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTT---------------------------- 136

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
             LI G+  E KI EA  L  +M+  G  P+V+TY T+I+ LC VGN   ++ +LG M  
Sbjct: 137 --LIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 194

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           + C PN+ ++ +++       +  EA +L++ M+ +G  P++  Y++LIH LC+      
Sbjct: 195 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 254

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             ++  +M ++   P+V +++ ++D   K G +  A  + ++MI  G  PNVV YT ++ 
Sbjct: 255 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMD 314

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C  +   +A  + + M  + C PN +++NT I G C   R+D AM L  +M + E +P
Sbjct: 315 GHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIP 374

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +  TY+ L+ GL  V R+++A  L  E+  C    N+VTY  +L  +C+   + EA  LL
Sbjct: 375 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 434

Query: 469 GKMLIEGTKLDA--ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
               IEG+ LD      NI I   C+ G++  A  L   +   G   PD+ +Y+ ++ G+
Sbjct: 435 KA--IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG-LQPDVWTYSIMINGL 491

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           C  G + EA    ++M   G   N   +N + R    N      + +L +++A
Sbjct: 492 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 544



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 246/492 (50%), Gaps = 5/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM   G+  +      +INS+  +     A  +  +I + G +P    +  ++  + 
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIY 142

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      ++  M  +G  P+V TY  L+  LCK      A +LL  M  K C P+  
Sbjct: 143 VEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF 202

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y TI+ S+CK  QV EA  L +     G+S     YN+LI+ LC   + +    LL EM
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           VD  I P+V++++T++ +LC  G V  +  ++ +M  RG  PN+ ++T+L+ G+ L    
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ M+ +G +PNV++Y+TLI+G C    +D+A+ +  +M      P+  TYS L
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G      L  A  +++ M++    PN+V Y  ++  LC+N    +A +L++ +   N 
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    N  I G+C  G ++ A  L   +      P++ TY+ +++GL R   + EA +
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+++ G  LN   YNTI  G  R      A QLL +M+  G   DA T  + +    
Sbjct: 503 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 562

Query: 492 KQGKVNNAIQLL 503
             G   +  Q+L
Sbjct: 563 DDGLDQSLKQIL 574



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 264/521 (50%), Gaps = 16/521 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  ++      L + +++  FG+ P +   + ++++    NR      + + + 
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+  T+  L++ +    ++  A  L  +M  +G  PD V+Y T+++ +CK+G   
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 153 EARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            A  L    GS V          YN +I+ LCK+ ++ EAF L  EMV +GI P++ TY+
Sbjct: 184 AAIRL---LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYN 240

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           ++I +LC++   +    +L +M      P++ SF +++      G+  EA D+ ++MI+ 
Sbjct: 241 SLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  PNVV Y+ L+ G C    MDEAV V   M    C PNV +Y+ LI+G+ K   +  A
Sbjct: 301 GVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKA 360

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             ++  M      P+ V Y+ ++  LC       A +L  +M   +  PN VT+   +  
Sbjct: 361 MYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDY 420

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC    +  AM LL  ++     P+I   N  +DG+ R   ++ A +L + +   G+Q +
Sbjct: 421 LCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 480

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           + TY+ +++G+CR G++ EA +L  +M   G  L+   +N I   + +  + + AIQLL 
Sbjct: 481 VWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQ 540

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
            +   G ++ D  S  +L   + +  G+ ++   L+++L E
Sbjct: 541 EMVARG-FSAD-ASTMTLFVKMLSDDGLDQS---LKQILRE 576



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 212/453 (46%), Gaps = 30/453 (6%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M  EG       + ++IN   +VG    A+++   + +   +P V  YN I+D+L
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + + +    ++S M   G+ P++FTYN L+ ALC          LL EM +    PD 
Sbjct: 212 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 271

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           VS+ T+V ++CK G+V EA ++  +                              M+ RG
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDK------------------------------MIQRG 301

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           ++PNV+TY+ ++   C +  ++ ++ +   M  +GC PN+ S+ +L+ GY    R  +A 
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAM 361

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L+  M R+  +P+ V YSTLIHGLC    + +A+++ ++M   S  PN+ TY  L+D  
Sbjct: 362 YLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYL 421

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K   L  A  +   +  +   P++      +  +C+      A  L   ++ +   P+ 
Sbjct: 422 CKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 481

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T++  I GLC  G +D A KL  +M +  C  N   YN +  G LR N    A +L+ E
Sbjct: 482 WTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQE 541

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +   G   +  T    +  +   G+     Q+L
Sbjct: 542 MVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 574



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 156/355 (43%), Gaps = 30/355 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L   CE   V  LL +M    +      F +V+++  + G   +A  +  ++ + G
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y  ++D     +       ++  M   G  PNV +YN L+   CK  R+D A 
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAM 361

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  EM  +   PD V+Y+T                              LI+GLC   +
Sbjct: 362 YLFGEMCRQELIPDTVTYST------------------------------LIHGLCHVER 391

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A  L  EMV     PN++TY  ++  LC    +  ++ +L  +     +P+I     
Sbjct: 392 LQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNI 451

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
            + G    G    A DL++ +  +G  P+V  YS +I+GLC  G +DEA  +  +M+EN 
Sbjct: 452 AIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           C  N   Y+ +  GF +      A Q+   M++ G S +    T  VK+L  + +
Sbjct: 512 CTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 38/310 (12%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++D A+S   +M     PP+   ++ L+   AK  +      + ++M S G  PN+    
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK--------------------- 383
            ++   C  N    A S++ K+      P+T TF T I+                     
Sbjct: 101 ILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE 160

Query: 384 --------------GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
                         GLC  G    A++LL  M Q  C PN+  YN ++D L +  +V EA
Sbjct: 161 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEA 220

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           F L +E+   GI  +I TYN+++H +C          LL +M+      D ++FN ++ A
Sbjct: 221 FNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDA 280

Query: 490 YCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            CK+GKV  A  ++D+ I+ G E  P++++YT+L+ G C    M EA      M+ +G  
Sbjct: 281 LCKEGKVTEAHDVVDKMIQRGVE--PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338

Query: 549 PNFATWNVLV 558
           PN  ++N L+
Sbjct: 339 PNVISYNTLI 348



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           N    A S   +M     PP+TV FN  +  +         + L  QM  +   PNI T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + L++    +NRV  AF ++ +I K G Q +  T+ T++ G+   G + EA  L  KM+ 
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG 159

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           EG + D +T+  +I   CK G  + AI+LL  +       P++ +Y +++  +C    + 
Sbjct: 160 EGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN-CQPNVFAYNTIIDSLCKDRQVT 218

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           EAF    +M+ +GI P+  T+N L+ +L
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHAL 246



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 6/153 (3%)

Query: 15  QYLLQQMK----VEGVSCSEGVFIS--VINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           +YL + M     +EG +    + ++   I+   R G  E A  +F  +   GL+P V  Y
Sbjct: 425 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 484

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + +++ L         + ++  M  +G   N   YN + +   +NN    A +LL EM  
Sbjct: 485 SIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 544

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +G + DA + T  V  +   G  +  +++   F
Sbjct: 545 RGFSADASTMTLFVKMLSDDGLDQSLKQILREF 577


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 257/509 (50%), Gaps = 10/509 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK- 121
           PT+  Y  +++      R  +    +  + R G++ +    N +LK LC   R D A K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFG---SGVSVYNALING 174
           LL  M   GC PDA SY  ++  +C   + ++A    R +A   G     V  YN +I+G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             KE KI +A  L  EM+ +G  P+V+T+++II++LC    V+ +  +L QM   G  PN
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++TS++ GY   GR  EA+ ++  M   G +P++V++++ +  LC +G   EA  + Y
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M      PN+ TY  L+ G+A  G        +N M  +G   N + +T ++    +  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A  ++ +M  +   P+  T++T I  LC  GR+  A+   +QM      PN   Y+
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYH 365

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            L+ G      + +A ELV E+   GI + NI  +N+I+H +C+ G V++A  +   +  
Sbjct: 366 SLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKD 425

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G + D I FN +I  YC  G++  A  +LD +   G   PD  +Y +L+ G   SG + 
Sbjct: 426 IGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAG-IGPDTFTYNTLVNGYFKSGRID 484

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +     ++M ++ I P   T+N+++  LF
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLF 513



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 263/538 (48%), Gaps = 10/538 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRD 94
           V+N   R    E  L  F R+   GLK      N +L  L    R    +  +   M   
Sbjct: 14  VMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTEL 73

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVE 152
           G  P+ F+Y I+LK LC +NR   A  LL  M  +   C+PD V+Y T++    K G++ 
Sbjct: 74  GCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIG 133

Query: 153 EA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A       +   F   V  +N++IN LCK   ++ A  LL +MVD G+ PN +TY+++I
Sbjct: 134 KACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMI 193

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
                +G  E +  +  +M  RG  P+I S+ S +      GR+ EA++++  M  +G  
Sbjct: 194 HGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHR 253

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN+V Y  L+HG  + G   + +S    M+ +    N   ++ LID +AK G +  A  I
Sbjct: 254 PNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLI 313

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            + M   G SP+V  Y+ ++  LC+      A     +M      PNTV +++ I+G C 
Sbjct: 314 LSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCT 373

Query: 388 CGRVDWAMKLL-DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
            G +  A +L+ + M      PNI  +N ++  + +  RV +A  +   ++  G + +I+
Sbjct: 374 HGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDII 433

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            +NT++ G C  G + +AF +L  M+  G   D  T+N ++  Y K G++++ + L  R 
Sbjct: 434 MFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLF-RE 492

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
               +  P  ++Y  +L G+  +G    A   L +M+  G   +  T+N++++ L  N
Sbjct: 493 MSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRN 550



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 266/560 (47%), Gaps = 11/560 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REFGL-KPTVKIYN 69
           D V+ LL++M   G       +  V+        ++QAL +   + +E G+  P V  YN
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E +      +Y  M + G  P+V T+N ++ ALCK   VD A  LL +M + 
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V+YT+++     LG+ EEA    RE+  R     +  +N+ ++ LCK  + +EA
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +   M  +G  PN++TY  ++      G     +     M   G   N   FT L+  
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDA 300

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   EA  + + M  +G  P+V  YSTLI  LC  G + +AV    QM      PN
Sbjct: 301 YAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPN 360

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCS-PNVVAYTCMVKVLCQNNMFHQAHSLI 363
              Y +LI GF   G+L+ A ++   M++NG   PN+  +  +V  +C+      AH + 
Sbjct: 361 TVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           + +       + + FNT I G C  G +  A  +LD M      P+  TYN L++G  + 
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R+ +   L  E+    I+   VTYN IL G+ RAG  V A ++L +M+  GT +   T+
Sbjct: 481 GRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTY 540

Query: 484 NIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           NII+   C+    + AI +  ++     ++N  I +  +++  +      +EA      +
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFN--ITTLNTMINSMYTVQRREEAKDLFSAI 598

Query: 543 LNEGICPNFATWNVLVRSLF 562
            + G+ PN +T+ +++R+L 
Sbjct: 599 SDSGLVPNASTYGIMIRNLL 618



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 245/505 (48%), Gaps = 68/505 (13%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P +FTY +++   C+  R +        +   G   D  +  T++  +C   + ++A ++
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +R                              M + G  P+  +Y+ ++  LCD    +
Sbjct: 66  LLR-----------------------------RMTELGCVPDAFSYAIVLKRLCDDNRSQ 96

Query: 218 TSLGILGQMFVRG--CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
            +L +L  M      C+P++ ++ +++ G+   G+  +A +L++ M+++GF+P+VV +++
Sbjct: 97  QALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNS 156

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +I+ LC   ++D A  +  QM +N  PPN  TY+++I G++  G    A++++  M   G
Sbjct: 157 IINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRG 216

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC--GC----- 388
             P++V++   +  LC++    +A  +   MA +   PN VT+   + G    GC     
Sbjct: 217 LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMM 276

Query: 389 ----------------------------GRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
                                       G +D AM +L +M+     P++ TY+ L+  L
Sbjct: 277 SFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISAL 336

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R+ R+ +A +   ++   G+Q N V Y++++ G C  G +V+A +L+ +M+  G     
Sbjct: 337 CRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPN 396

Query: 481 IT-FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
           I  FN I+++ CK+G+V +A  + D ++  GE + DII + +L+ G C  G M +AF  L
Sbjct: 397 IAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERS-DIIMFNTLIDGYCLVGEMGKAFSVL 455

Query: 540 QKMLNEGICPNFATWNVLVRSLFSN 564
             M++ GI P+  T+N LV   F +
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKS 480



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 245/512 (47%), Gaps = 41/512 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D  + LL+QM   GV  ++  + S+I+ Y  +G  E+A KMF  +   G
Sbjct: 157 IINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRG 216

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL------------- 107
           L P +  +N  +D+L    R      I+ +M   G  PN+ TY ILL             
Sbjct: 217 LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMM 276

Query: 108 ----------------------KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                  A  K   +D A  +L EM  +G +PD  +Y+T++S++
Sbjct: 277 SFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISAL 336

Query: 146 CKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGID-PN 199
           C++G++ +A  +     G+GV     VY++LI G C    + +A  L+ EM++ GI  PN
Sbjct: 337 CRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPN 396

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +  +++I+ S+C  G V  +  I   +   G   +I  F +L+ GY L G   +A  + +
Sbjct: 397 IAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLD 456

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MI  G  P+   Y+TL++G   +G +D+ +++  +M +    P   TY+ ++DG  +AG
Sbjct: 457 AMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG 516

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             + A ++ + MI  G + ++  Y  ++K LC+NN   +A  + +K+   N   N  T N
Sbjct: 517 RTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLN 576

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I  +    R + A  L   +     +PN +TY  ++  LL+   V+EA  + + +EK 
Sbjct: 577 TMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKS 636

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           G        N  +  +   G +V+A   + K+
Sbjct: 637 GCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 245/537 (45%), Gaps = 43/537 (8%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M  E   CS  V  + +VI+ + + G   +A  +++ + + G  P V  +N I++A
Sbjct: 101 LLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINA 160

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           +   M  +G+ PN  TY  ++       R + A K+  EM  +G  PD
Sbjct: 161 LCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPD 220

Query: 135 AVSYTTIVSSICKLGQVEEAREL-------------------------------AMRF-- 161
            VS+ + + S+CK G+ +EA E+                                M F  
Sbjct: 221 IVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFN 280

Query: 162 ---GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              G G+     V+  LI+   K   ++EA  +L EM  +G+ P+V TYST+IS+LC +G
Sbjct: 281 TMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMG 340

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAY 273
            +  ++    QM   G  PN   + SL++G+   G   +A +L   M+  G   PN+  +
Sbjct: 341 RLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFF 400

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++++H +C  G + +A  +   +++     ++  ++ LIDG+   G +  A  + + MIS
Sbjct: 401 NSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMIS 460

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  P+   Y  +V    ++       +L  +M+ +   P TVT+N  + GL   GR   
Sbjct: 461 AGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVA 520

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A K+L +M       ++ TYN +L GL R N   EA  +  ++    ++ NI T NT+++
Sbjct: 521 AQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMIN 580

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            +       EA  L   +   G   +A T+ I+I    K+G V  A  +   +   G
Sbjct: 581 SMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 170/372 (45%), Gaps = 39/372 (10%)

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           +R   P I ++  ++ G     R       + R++R G   +  A +T++  LC     D
Sbjct: 1   MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD 60

Query: 288 EAVSV---------------SYQM-----------------------EENSCPPNVTTYS 309
           +AV V               SY +                       EE  C P+V TY+
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +I GF K G +  A  +++ M+  G  P+VV +  ++  LC+      A  L+ +M   
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDN 180

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
             PPN VT+ + I G    GR + A K+  +M     +P+I ++N  +D L +  R KEA
Sbjct: 181 GVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEA 240

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            E+   +   G + NIVTY  +LHG    G   +       M  +G   + + F I+I A
Sbjct: 241 AEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDA 300

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           Y K+G ++ A+ +L  ++G G  +PD+ +Y++L+  +C  G + +A     +M+  G+ P
Sbjct: 301 YAKRGMMDEAMLILSEMQGQG-LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQP 359

Query: 550 NFATWNVLVRSL 561
           N   ++ L++  
Sbjct: 360 NTVVYHSLIQGF 371


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 280/542 (51%), Gaps = 22/542 (4%)

Query: 41  RRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           RR    + A++ F +   + G K  V  YNH+LD L+          +Y ++   G  PN
Sbjct: 2   RRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPN 61

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-- 157
           + T+ IL++  CK  +   A + L  +     APD   +  ++  + K G  ++A +L  
Sbjct: 62  LVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFE 121

Query: 158 ---AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISS-LC 211
              + R    +  YN +I+GLCK   +E+A  LL EM+ RG    P+++TY+T+I++ +C
Sbjct: 122 NMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGIC 181

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G+VE +L IL  M + G  P++ ++ S++    + GR  EA+++   M      P++V
Sbjct: 182 KDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLV 238

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++TL+ G C  G +  A+ V  +M   +  P+V TY+ L++G  + G +  A  +   +
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE---------NCPPNTVTFNTFI 382
           +  G  P+V+AYT +V  LC++    +AH L+++M+           N  P   T+N  +
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GL   G +  A+ L+  +     +P++ TYN L+DGL + NRV+EA +L  E+   G  
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N VT  +++ G+CR G V +A+ L+ +M  +    + + +  +I   CK  ++++A  +
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           LD +RG G    D  +Y  L+  + + G + EA     +M+  G  P+ +T   L  +  
Sbjct: 479 LDAMRGQGVALDD-FAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAM 537

Query: 563 SN 564
           SN
Sbjct: 538 SN 539



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 199/434 (45%), Gaps = 49/434 (11%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           +F  +I+   + G  +QA+K+F  +    + P +  YN ++  L           +   M
Sbjct: 99  IFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEM 158

Query: 92  KRDGME--PNVFTYNILLKA-LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
            R G +  P++ TYN L+ A +CK+  V+ A ++L  M   G APD ++Y +I+ ++C  
Sbjct: 159 IRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVA 218

Query: 149 GQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           G+V EA E+   M     +  +N L++G CK   +  A  +L EM    I P+VITY+ +
Sbjct: 219 GRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 278

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM----- 261
           ++ LC VG V+ +  +L ++  +G  P++ ++TSL+ G    G   EA  L   M     
Sbjct: 279 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREI 338

Query: 262 ---------------------------------------IREGFLPNVVAYSTLIHGLCS 282
                                                  +  G++P+VV Y+TLI GLC 
Sbjct: 339 LAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 398

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              + EA  ++ +M    C PN  T  +++ G  + G +  A  +   M     +PNVV 
Sbjct: 399 ANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVV 458

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT ++  LC+++    A  +++ M  +    +   +   I  +   GRV  AM + D+M 
Sbjct: 459 YTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMV 518

Query: 403 QYECLPNITTYNEL 416
               LP+ +T   L
Sbjct: 519 ARGFLPDGSTSKTL 532



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 174/364 (47%), Gaps = 17/364 (4%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E+AL++   ++  G  P V  YN I+ AL    R      I   M      P++ T+
Sbjct: 184 GDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTF 240

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMR 160
           N LL   CK   +  A ++L EM  +   PD ++YT +V+ +C++GQV+ A    E  +R
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300

Query: 161 FG--SGVSVYNALINGLCKEHKIEEAFWL---------LCEMVDRGIDPNVITYSTIISS 209
            G    V  Y +L++GLCK  +IEEA  L         L EMV   + P + TY+ ++  
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGG 360

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           L   G++  ++ ++  +  RG  P++ ++ +L+ G     R  EA DL + M   G  PN
Sbjct: 361 LIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPN 420

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            V   +++ GLC  G +D+A S+  +M      PNV  Y++LIDG  K+  +  A  + +
Sbjct: 421 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLD 480

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M   G + +  AY  ++  +       +A ++ ++M      P+  T  T  +      
Sbjct: 481 AMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNS 540

Query: 390 RVDW 393
             +W
Sbjct: 541 VFEW 544



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 172/355 (48%), Gaps = 17/355 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L  MK+ G +     + S+I++    G   +A ++   ++     P +  +N +LD   
Sbjct: 192 ILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFC 248

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +   M R+ + P+V TY IL+  LC+  +V  A+ LL E+  +G  PD +
Sbjct: 249 KAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVI 308

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR--FGSGVSV--------YNALINGLCKEHKIE 182
           +YT++V  +CK G++EEA    +E++ R      VS+        YN ++ GL K+  I 
Sbjct: 309 AYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 368

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A  L+ ++V RG  P+V+TY+T+I  LC    V  +  +  +M   GC PN  +  S++
Sbjct: 369 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVV 428

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    GR  +A  L   M R+   PNVV Y++LI GLC +  MD+A  V   M      
Sbjct: 429 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVA 488

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
            +   Y  LI      G +  A  +++ M++ G  P+      + +    N++F 
Sbjct: 489 LDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 543


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/589 (28%), Positives = 286/589 (48%), Gaps = 55/589 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +    D    +L+++K   +      F  +I +Y + G+AE+A++ F ++++FG
Sbjct: 102 VIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFG 161

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN IL  ++ +  F +   +Y+ M +    PN  T+ ILL  LCKN + D A 
Sbjct: 162 CKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDAL 221

Query: 121 KLLVEMGNK-----------------------------------GCAPDAVSYTTIVSSI 145
           K+  EM  K                                   GC PD+++   ++   
Sbjct: 222 KMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGF 281

Query: 146 CKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CKLGQ++EA  L   F       G+  Y++LI+GL +  + +E      +M   GI+P+V
Sbjct: 282 CKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDV 341

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + Y+ +I   C+VG V+ +L +L  M  RG +P+ + + +L+KG+   G   +A  L   
Sbjct: 342 VLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLE 401

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           + +    P    Y+ LI G+C NG +DEA  +  QME   C P++ T++ALIDG  KAG 
Sbjct: 402 ISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE 461

Query: 321 LLGASQIWNRM-----------ISNGCSP--NVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           L  A  ++ +M           +S G     +  +   MV+ LC++ +  +A+ L+ ++A
Sbjct: 462 LEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLA 521

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                P+ +T+N  I G C    ++ A KL  +++     P+  TY  L+DG  RV+R +
Sbjct: 522 DSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREE 581

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +AF ++ ++ K G   +   Y  ++   CR G +  AF L  K L      +  T   + 
Sbjct: 582 DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK-LA 640

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             + ++G++  A++ L  +      N +I  YT  L G+C +   +EA 
Sbjct: 641 EEHFEKGELEKAVRCLLEMNFKLN-NFEIAPYTIWLIGLCQARRSEEAL 688



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 264/548 (48%), Gaps = 22/548 (4%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  +   V+   RR  L  +      R R F    T   +N ++D L  ++ F     I 
Sbjct: 63  SSEIVNDVMREQRRPELGFRFFIWTTRRRSFRSWVT---HNLVIDMLAKDDGFDTYWKIL 119

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK- 147
             +K   ++    T+++L+ A  K+   + A +   +M + GC PD  +Y +I+  + + 
Sbjct: 120 EELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQK 179

Query: 148 ----LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
               L      + L + +    + +  L+NGLCK  K ++A  +  EM  +GI PN + Y
Sbjct: 180 EVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIY 239

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + I+S LC     +    +L  M V GC P+  +  +LL G+   G+  EA  L     +
Sbjct: 240 TIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEK 299

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           EG++  +  YS+LI GL      DE      +M +    P+V  Y+ LI GF + G +  
Sbjct: 300 EGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDY 359

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  + N M   G SP+   Y  ++K  C   +  +A SL  +++  +C P + T+   I 
Sbjct: 360 ALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILIC 419

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE------ 437
           G+C  G +D A ++ +QM+   C P+I T+N L+DGL +   ++EA  L  ++E      
Sbjct: 420 GMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPS 479

Query: 438 -------KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
                       ++  +  T++  +C +G++++A++LL ++   G   D +T+N++I  +
Sbjct: 480 LFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGF 539

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK   +N A +L   ++  G  +PD ++Y +L+ G       ++AF  L +M+  G  P+
Sbjct: 540 CKAKNINGAFKLFRELQLKGH-SPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPS 598

Query: 551 FATWNVLV 558
            A +  L+
Sbjct: 599 SAVYKCLM 606



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 181/392 (46%), Gaps = 2/392 (0%)

Query: 171 LINGLCKEHKIEE-AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
           ++N + +E +  E  F        R    + +T++ +I  L      +T   IL ++   
Sbjct: 66  IVNDVMREQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNS 125

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
                  +F+ L+  Y   G   +A + + +M   G  P+V  Y++++H +        A
Sbjct: 126 NIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLA 185

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           ++V  QM + +  PN  T+  L++G  K G    A ++++ M   G  PN + YT ++  
Sbjct: 186 LAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSG 245

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LCQ       H L+  M    C P+++T N  + G C  G++D A  LL   ++   +  
Sbjct: 246 LCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLG 305

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I  Y+ L+DGL R  R  E  E   ++ K GI+ ++V Y  ++ G C  GMV  A  +L 
Sbjct: 306 IKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLN 365

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M   G   D   +N +I  +C  G ++ A  L   I    +  P   +YT L+ G+C +
Sbjct: 366 DMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEI-SKNDCFPTSCTYTILICGMCRN 424

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G + EA     +M N G  P+  T+N L+  L
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 228/521 (43%), Gaps = 54/521 (10%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  LL  MKV G         ++++ + ++G  ++A  +     + G    +K Y+ +
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D L    R+  +      M + G+EP+V  Y IL++  C+   VD A  +L +M  +G 
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFW 186
           +PD   Y  ++   C +G +++AR L +             Y  LI G+C+   ++EA  
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQ 432

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH---------- 236
           +  +M + G  P+++T++ +I  LC  G +E +  +  +M + G NP++           
Sbjct: 433 IFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI-GKNPSLFLRLSQGADRV 491

Query: 237 ----SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
               S  ++++     G   +A  L  ++   G +P+++ Y+ LI+G C   +++ A  +
Sbjct: 492 MDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKL 551

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +++     P+  TY  LIDGF +      A ++ ++M+ NGC+P+   Y C++   C+
Sbjct: 552 FRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 611

Query: 353 NNMFHQAHSL---------------------------IEK-------MAFENCPPNTVTF 378
                 A SL                           +EK       M F+        +
Sbjct: 612 KGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPY 671

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
             ++ GLC   R + A+K+   +K+ +   N  +   L++GL +   ++ A ++     +
Sbjct: 672 TIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLE 731

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            G  L     N +L  +     +  A  LL +M   G  LD
Sbjct: 732 KGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLD 772



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 15/311 (4%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            +S LI     +G  ++AV    +M++  C P+V TY++++    +    L A  ++N+M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +    +PN   +  ++  LC+N     A  + ++M  +  PPNT+ +   + GLC   R 
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D   +LL+ MK   C P+  T N LLDG  ++ ++ EAF L+   EK G  L I  Y+++
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G+ RA    E  +   KM   G + D + + I+I  +C+ G V+ A+ +L+ +   G 
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG- 371

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLV------------ 558
            +PD   Y +L+ G C+ G + +A   LQ  +++  C P   T+ +L+            
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKA-RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEA 430

Query: 559 RSLFSNLGHLG 569
           R +F+ + +LG
Sbjct: 431 RQIFNQMENLG 441



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 2/298 (0%)

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V ++ +I  L  +   D    +  +++ ++      T+S LI  +AK+G    A + + +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   GC P+V  Y  ++ V+ Q  +F  A ++  +M   N  PN  TF   + GLC  G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            D A+K+ D+M Q    PN   Y  +L GL +  R  +   L+  ++  G   + +T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L G C+ G + EAF LL     EG  L    ++ +I    +  + +   +   ++   G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
              PD++ YT L+ G C  G +  A   L  M   G+ P+   +N L++  F ++G L
Sbjct: 337 -IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKG-FCDVGLL 392


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 260/490 (53%), Gaps = 7/490 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PT + +N IL +L+     S    ++  M+ +G+E + FT+NIL+    +      ++ +
Sbjct: 60  PTFQ-FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
             ++  KG  P A+++ T++  +C  G + +A     + +A  F      Y  LINGLCK
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +I  A  LL  +  + + PN + Y+ II ++C    V  +  +  QM  +   P++ +
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +L+ G+    + + A DL+N+M +E   PNV  ++ L+ G C  G +++A  V   M 
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           ++   P+V TY++L+DG+     +  A  I++ M S G   NV  YT MV   C+  M  
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A +L E+M      PN VT+++ I GLC  GR+ +A+KL+D+M      PNI TY+ +L
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSIL 418

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L + + V +A  L+T ++  GI+ ++ TY  ++ G+C++G + +A  +   +L++G  
Sbjct: 419 DALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYN 478

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           LD   + ++I  +C +G  + A+ LL ++   G   P+  +Y  ++  +        A  
Sbjct: 479 LDVYAYTVMIQGFCDKGFFDKALALLSKMEDNG-CIPNAKTYELVILSLFEKDENDTAEK 537

Query: 538 YLQKMLNEGI 547
            L++M+  G+
Sbjct: 538 LLREMIVRGL 547



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 236/499 (47%), Gaps = 42/499 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L QQM++ G+      F  +IN + ++GL   +  +F +I + G  PT   +N ++  L 
Sbjct: 83  LHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLC 142

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +         +  +   G   +  +Y  L+  LCK  R+  A +LL  +  K   P+AV
Sbjct: 143 LKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAV 202

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I+ ++CK   V +A +L     A R    V  YNALI+G     K+  A  L  +M
Sbjct: 203 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKM 262

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               I+PNV T++ ++   C  G V  +  +L  M      P++ ++ SL+ GY    + 
Sbjct: 263 KKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV 322

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A D+++ M   G + NV  Y+T+++G C    +DEA+++  +M      PNV TYS+L
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A ++ + M   G  PN+V Y+ ++  LC+N+   +A +L+  +  +  
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+   IKGLC  GR++ A  + +                  D L++         
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFE------------------DLLVK--------- 475

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
                   G  L++  Y  ++ G C  G   +A  LL KM   G   +A T+ ++I +  
Sbjct: 476 --------GYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLF 527

Query: 492 KQGKVNNAIQLLDR--IRG 508
           ++ + + A +LL    +RG
Sbjct: 528 EKDENDTAEKLLREMIVRG 546



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 203/406 (50%), Gaps = 5/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K  I    +   ++  +G    +  + ++IN   +VG    AL++  R+    
Sbjct: 137 LIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL 196

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P   +YN I+D +      +    +YS M    + P+VFTYN L+      ++++ A 
Sbjct: 197 VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAI 256

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMR--FGSGVSVYNALINGL 175
            L  +M  +   P+  ++  +V   CK G+V +A+    + M+      V  YN+L++G 
Sbjct: 257 DLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGY 316

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C  +K+ +A  +   M   G+  NV  Y+T+++  C +  V+ ++ +  +M  R   PN+
Sbjct: 317 CSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNV 376

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    GR   A  L + M   G  PN+V YS+++  LC N  +D+A+++   
Sbjct: 377 VTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTN 436

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +++    P++ TY+ LI G  ++G L  A  ++  ++  G + +V AYT M++  C    
Sbjct: 437 LKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGF 496

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           F +A +L+ KM    C PN  T+   I  L      D A KLL +M
Sbjct: 497 FDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREM 542



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 204/404 (50%), Gaps = 3/404 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F S + +++ L +   +E+ +  +F  L  ++ +   P    ++ I+SSL    +  T+L
Sbjct: 24  FPSSIRLFSQLHHKQDEENNLISSFNHL--LLHKNPTPPTFQFNKILSSLVKAKHHSTAL 81

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM + G   +  +F  L+  +   G    +  ++ +++++G+ P  + ++TLI GL
Sbjct: 82  SLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGL 141

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G + +A+    ++       +  +Y  LI+G  K G +  A Q+  R+      PN 
Sbjct: 142 CLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNA 201

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++  +C+  + + A  L  +M  +   P+  T+N  I G     ++++A+ L ++
Sbjct: 202 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNK 261

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           MK+    PN+ T+N L+DG  +  +V +A  ++  + K  I+ ++VTYN+++ G C    
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V +A  +   M   G   +   +  ++  +CK   V+ AI L + +R   +  P++++Y+
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMR-CRKIIPNVVTYS 380

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           SL+ G+C  G +  A   + +M + G  PN  T++ ++ +L  N
Sbjct: 381 SLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKN 424



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +   M   GV  +  ++ +++N + ++ + ++A+ +F  +R   + P V  Y+
Sbjct: 321 KVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYS 380

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R      +   M   G  PN+ TY+ +L ALCKN+ VD A  LL  + ++
Sbjct: 381 SLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQ 440

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +YT ++  +C+ G++E+A+      L   +   V  Y  +I G C +   ++A
Sbjct: 441 GIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKA 500

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             LL +M D G  PN  TY  +I SL +    +T+  +L +M VRG
Sbjct: 501 LALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/522 (28%), Positives = 269/522 (51%), Gaps = 10/522 (1%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRDGM 96
           +S+R +   + AL  F  +     +P +  +N +L A++    +   +  +   M+  G+
Sbjct: 97  SSFRNI---DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGL 153

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P+ +T ++L+    +  RVD  + +L ++   G     V++ T+++ +CK+G+  +A E
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213

Query: 157 L-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L     A  +   V  Y  +INGLCK  +   A  L  +M + G  P+V+TYSTII SLC
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               V  +L I   M  +G +PNI ++ SL++G     R  EAS + N M+    +PN+V
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            +S LI+  C  G++ EA  V   M E    PNV TYS+L++G++    ++ A ++++ M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           I+ GC P+V +Y  ++   C+     +A  L  +M  +   P+ V++NT I GLC  GR+
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  L   M     LP++ TY+ LLDG  +   + +AF L   ++   ++ N+V YN +
Sbjct: 454 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 513

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +  +C++  + EA +L  ++ ++G + +   +  II   CK+G ++ A++    +   G 
Sbjct: 514 IDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG- 572

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             P+  SY  ++ G         A   + +M  +G   + AT
Sbjct: 573 CPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 239/476 (50%), Gaps = 5/476 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L +QM++ G+S        +IN + ++   +    +  +I + GL+ T+  +N +
Sbjct: 139 DAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTL 198

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L    +F     ++ +M   G +P+V TY  ++  LCK      A  L  +MG  GC
Sbjct: 199 INGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGC 258

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            PD V+Y+TI+ S+CK  +V EA ++     A      +  YN+LI GLC   +  EA  
Sbjct: 259 QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 318

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +L EM+   I PN++T+S +I+  C  GNV  + G+L  M   G  PN+ +++SL+ GY 
Sbjct: 319 MLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 378

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           L     EA  L++ MI +G  P+V +Y+ LI+G C    + EA  +  +M      P++ 
Sbjct: 379 LQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 438

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y+ LIDG  + G L  A  ++  M++NG  P++  Y+ ++   C+     +A  L   M
Sbjct: 439 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 498

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 PN V +N  I  +C    +  A KL  ++      PN+  Y  +++GL +   +
Sbjct: 499 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLL 558

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            EA E    +E+ G   N  +YN I+ G  +      A QL+G+M  +G   D  T
Sbjct: 559 DEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 248/483 (51%), Gaps = 7/483 (1%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRV-DGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +++M      P +  +N LL A+ K     D    L  +M   G +PD  +   +++   
Sbjct: 109 FNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFF 168

Query: 147 KLGQVEE-----ARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           +L +V+      A+ + +     +  +N LINGLCK  K  +A  L  +MV RG  P+V 
Sbjct: 169 QLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVH 228

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+TII+ LC +G    + G+  +M   GC P++ ++++++       R +EA D+++ M
Sbjct: 229 TYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM 288

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G  PN+  Y++LI GLC+     EA ++  +M   +  PN+ T+S LI+ F K GN+
Sbjct: 289 KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 348

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +   M   G  PNVV Y+ ++          +A  L + M  + C P+  ++N  
Sbjct: 349 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNIL 408

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C   R+  A +L ++M      P+I +YN L+DGL ++ R++EA +L   +   G 
Sbjct: 409 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 468

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ TY+ +L G C+ G + +AF+L   M     K + + +NI+I A CK   +  A +
Sbjct: 469 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 528

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L   +   G   P++  YT+++ G+C  G + EA    + M  +G  PN  ++NV++R  
Sbjct: 529 LFSELFVQG-LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587

Query: 562 FSN 564
             +
Sbjct: 588 LQH 590



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 211/395 (53%), Gaps = 3/395 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS-LGILGQMFVRGCNPNIHSFT 239
           I++A      M+ R   P +I ++ ++S++  + +   + + +  QM + G +P+ ++  
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+  +    R      +  ++I+ G    +V ++TLI+GLC  G   +AV +   M   
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P+V TY+ +I+G  K G  + A+ ++ +M   GC P+VV Y+ ++  LC++   ++A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             +   M  +   PN  T+N+ I+GLC   R   A  +L++M     +PNI T++ L++ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             +   V EA  ++  + + G++ N+VTY+++++G      VVEA +L   M+ +G K D
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             ++NI+I  YCK  ++  A QL + +   G   PDI+SY +L+ G+C  G ++EA    
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQG-LTPDIVSYNTLIDGLCQLGRLREAHDLF 460

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           + ML  G  P+  T+++L+   F   G+L   + L
Sbjct: 461 KNMLTNGNLPDLCTYSILLDG-FCKQGYLAKAFRL 494



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 5/347 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++    +   MK +G+S +   + S+I          +A  M   +    
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  ++ +++    E        +   M   G+EPNV TY+ L+        V  A 
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEAR 387

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           KL   M  KGC PD  SY  +++  CK  ++ EA++L            +  YN LI+GL
Sbjct: 388 KLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 447

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  ++ EA  L   M+  G  P++ TYS ++   C  G +  +  +   M      PN+
Sbjct: 448 CQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 507

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  L+          EA  L++ +  +G  PNV  Y+T+I+GLC  G +DEA+     
Sbjct: 508 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 567

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           MEE+ CPPN  +Y+ +I GF +  +   A Q+   M   G   +V  
Sbjct: 568 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 281/565 (49%), Gaps = 5/565 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     +  +D    LL +MK   +     ++   I+ + + G  + + K F+ ++  G
Sbjct: 236 LIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHG 295

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++  L   NR      ++  ++++   P  + YN ++       + D AY
Sbjct: 296 LMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAY 355

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            LL     KG  P  ++Y  I++ + K  +VEEA     E+       V  YN LI+ LC
Sbjct: 356 GLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLC 415

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +E K+  A  +  +M   G+ PNV+T + +I  LC    +E +  I   M  + C PN  
Sbjct: 416 REGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAV 475

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F+SL+ G    GR  +A  L+ +M+  G +P  + Y++LI      G  ++   +  +M
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
               C P++T  +  +D   KAG       ++  + ++G  P+  +Y+ ++  L +  + 
Sbjct: 536 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 595

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           ++ + L   M  + C  +T  +N  I G C  G+V+ A +LL++MK     P + TY  +
Sbjct: 596 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 655

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +  GI+LN+V Y++++ G  + G + EA+ ++ +++ +G 
Sbjct: 656 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 715

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+N ++ A  K  ++N A+     ++   +  P+ I+Y+ L+ G+C      +AF
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMK-DLKCPPNQITYSILINGLCRVRKFNKAF 774

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
           ++ Q+M   G+ PN  T+  ++  L
Sbjct: 775 VFWQEMQKLGLKPNTITYTTMISGL 799



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 277/550 (50%), Gaps = 7/550 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++Q M+      +   +  +I +   V   +  L +F++++E G +  V ++  ++    
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFA 241

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   MK + ++ ++  YN+ +    K  +VD ++K   EM + G  PD V
Sbjct: 242 REGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++  +CK  +++EA EL  +      V     YN +I G     K +EA+ LL   
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G  P+VI Y+ I++ L     VE +L I  +M  R   PN+ ++  L+      G+ 
Sbjct: 362 KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKL 420

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           + A ++ + M R G  PNV+  + +I  LC    ++EA S+   M++  C PN  T+S+L
Sbjct: 421 NAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 480

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A  ++ +M+  G  P  + YT +++   +       H + ++M    C
Sbjct: 481 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGC 540

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    NT++  +   G  +    L  ++  +  +P+  +Y+ L+ GL++     E +E
Sbjct: 541 SPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYE 600

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +++ G  L+   YN ++ G C++G V +A+QLL +M ++G     +T+  +I    
Sbjct: 601 LFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLA 660

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K  +++ A  L +  +  G    +++ Y+SL+ G    G + EA++ +++++ +G+ PN 
Sbjct: 661 KIDRLDEAYMLFEEAKSNG-IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 719

Query: 552 ATWNVLVRSL 561
            TWN L+ +L
Sbjct: 720 YTWNCLLDAL 729



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 160/567 (28%), Positives = 276/567 (48%), Gaps = 9/567 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKV-EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L +   +D    L +Q++    V C+   + ++I  Y   G  ++A  +  R +  
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYA-YNTMIMGYGSAGKFDEAYGLLERQKAK 364

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P+V  YN IL  L  + R      I+  MKRD + PNV TYNIL+  LC+  +++ A
Sbjct: 365 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAA 423

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LING 174
            ++  +M   G  P+ ++   ++  +CK  ++EEA  +       V   NA     LI+G
Sbjct: 424 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K  ++++A+ L  +M+D G  P  I Y+++I S    G  E    I  +M   GC+P+
Sbjct: 484 LGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +    + +      G T +   L+  +   GF+P+  +YS LIHGL   G  +E   + Y
Sbjct: 544 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 603

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M+E  C  +   Y+A+IDGF K+G +  A Q+   M   G  P VV Y  ++  L + +
Sbjct: 604 AMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKID 663

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A+ L E+        N V +++ I G    GR+D A  +++++ Q    PN+ T+N
Sbjct: 664 RLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWN 723

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LLD L++   + EA      ++      N +TY+ +++G+CR     +AF    +M   
Sbjct: 724 CLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKL 783

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G K + IT+  +I    K G +  A  L  R +  G   PD  SY +++ G+ ++    +
Sbjct: 784 GLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGI-PDSASYNAMIEGLSSANKAMD 842

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           A+   ++   +G   +  T  VL+ +L
Sbjct: 843 AYALFEETRLKGCNIHTKTCVVLLDAL 869



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/600 (25%), Positives = 279/600 (46%), Gaps = 45/600 (7%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           + + E V C E  + S++    R    +   ++   +   G  P+  I   ++   +   
Sbjct: 116 EKQTEKVHCPEA-YNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSR 174

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
           +      I   M++    P    Y IL+ AL +    D    L  +M   G   +   +T
Sbjct: 175 KLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFT 234

Query: 140 TIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           T++    + G+V+ A  L     +    + + +YN  I+   K  K++ ++    EM   
Sbjct: 235 TLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSH 294

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P+ +TY+++I  LC    ++ ++ +  Q+      P  +++ +++ GY   G+  EA
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L  R   +G +P+V+AY+ ++  L     ++EA+ +  +M+ ++  PNV TY+ LID 
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDM 413

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             + G L  A +I + M   G  PNV+    M+  LC+     +A S+ E M  + C PN
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQM-----------------------------KQYE 405
            VTF++ I GL  CGRVD A  L ++M                             K Y+
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 533

Query: 406 ------CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
                 C P++T  N  +D + +    ++   L  EI   G   +  +Y+ ++HG+ +AG
Sbjct: 534 EMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
           +  E ++L   M  +G  LD   +N +I  +CK GKVN A QLL+ ++  G   P +++Y
Sbjct: 594 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH-PPTVVTY 652

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY-ILDDIM 578
            S++ G+     + EA++  ++  + GI  N   ++ L+   F  +G +   Y I++++M
Sbjct: 653 GSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG-FGKVGRIDEAYLIMEELM 711



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 244/532 (45%), Gaps = 41/532 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G   + D    LL++ K +G   S   +  ++    +    E+AL++F  ++   
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 400

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN ++D L  E + +    I  +M+R G+ PNV T NI++  LCK  +++ A 
Sbjct: 401 V-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 459

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            +   M +K C P+AV++++++  + K G+V++A  L  +        G  VY +LI   
Sbjct: 460 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 519

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVI---------------------------------- 201
            K  + E+   +  EMV  G  P++                                   
Sbjct: 520 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 579

Query: 202 -TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            +YS +I  L   G    +  +   M  +GC  + H++ +++ G+   G+ ++A  L   
Sbjct: 580 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 639

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P VV Y ++I GL     +DEA  +  + + N    NV  YS+LIDGF K G 
Sbjct: 640 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 699

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  I   ++  G +PNV  + C++  L +    ++A    + M    CPPN +T++ 
Sbjct: 700 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 759

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLC   + + A     +M++    PN  TY  ++ GL +   + EA  L +  +  G
Sbjct: 760 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 819

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              +  +YN ++ G+  A   ++A+ L  +  ++G  +   T  +++ A  K
Sbjct: 820 GIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 871



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 200/436 (45%), Gaps = 6/436 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A  +F  + +    P    ++ ++D L    R      +Y  M   G  P    Y  L
Sbjct: 456 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 515

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           +++  K  R +  +K+  EM + GC+PD     T +  + K G+ E+ R L     A  F
Sbjct: 516 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 575

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y+ LI+GL K     E + L   M ++G   +   Y+ +I   C  G V  +  
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M V+G  P + ++ S++ G     R  EA  L+      G   NVV YS+LI G  
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA  +  ++ +    PNV T++ L+D   KA  +  A   +  M    C PN +
Sbjct: 696 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++  LC+   F++A    ++M      PNT+T+ T I GL   G +  A  L  + 
Sbjct: 756 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF 815

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           K    +P+  +YN +++GL   N+  +A+ L  E    G  ++  T   +L  + +A  +
Sbjct: 816 KANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECL 875

Query: 462 VEAFQLLGKMLIEGTK 477
            +A  ++G +L E  K
Sbjct: 876 EQA-AIVGAVLKETAK 890



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 68/154 (44%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  EI+      Q MK      ++  +  +IN   RV    +A   +  +++ G
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    Y  ++  L         + ++S  K +G  P+  +YN +++ L   N+   AY
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 844

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            L  E   KGC     +   ++ ++ K   +E+A
Sbjct: 845 ALFEETRLKGCNIHTKTCVVLLDALHKAECLEQA 878


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 245/481 (50%), Gaps = 8/481 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  V+ SY R G    A+++   +++ G++P + I N  +  L+  NR          M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +   +EPNV TYN L+K  C  +R++ A +L+ EM  KGC+PD +SY T++  +CK  ++
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353

Query: 152 EEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +E R L  +     ++      YN  ++ L K    +EA   L E  +R    + + YS 
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I+ S C  G ++ +  I+ +MF +GC P++ ++TS++ G     +  +A  +  +M + G
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN V+Y+ L++GLC NG+  EA  +    EE+   PN  TYS L+ GF + G    A 
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 533

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +   MI  G  P  V    +++ LCQ     +A   +E+     C  N V F T I G 
Sbjct: 534 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 593

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C    ++ A+ LLD M      P++ TY  ++D L +  R++EA +L  ++ + G+    
Sbjct: 594 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTP 653

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTY T++H  CR G V +  +LL KML       A  +N +I   C  G +  A +LL +
Sbjct: 654 VTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTA--YNQVIEKLCSFGNLEQAYKLLGK 711

Query: 506 I 506
           +
Sbjct: 712 V 712



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 226/432 (52%), Gaps = 9/432 (2%)

Query: 133 PDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWL 187
           P+A  Y  +  S  + G++  A R L M   +G+    S+ N  I+ L   +++++A   
Sbjct: 232 PEAFGYVMV--SYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L  M    I+PNVITY+ +I   CD+  +E ++ ++ +M  +GC+P+  S+ +++     
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349

Query: 248 GGRTHEASDLWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             R  E   L  +M+++   LP+ V Y+T +H L  +G  DEA+    + EE     +  
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            YSA++  F + G +  A +I N M S GC P+VV YT ++  LCQ     QA  ++ +M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
               C PNTV++   + GLC  G    A ++++  ++   +PN  TY+ L+ G  R  + 
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA +LV E+ K G     V  N ++  +C+   V EA + + + L  G  ++ + F  +
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I+ +C++  +  A+ LLD +    + +PD+++YT+++  +   G ++EA     KML  G
Sbjct: 590 IHGFCQKDDLEAALSLLDDMYLSNK-HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVG 648

Query: 547 ICPNFATWNVLV 558
           + P   T+  ++
Sbjct: 649 LIPTPVTYRTVI 660



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 165/326 (50%), Gaps = 2/326 (0%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F  ++  Y   G+   A  +   M + G  P++   +T IH L     +D+AV    +M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +     PNV TY+ LI G+     L  A ++   M   GCSP+ ++Y  ++  LC+    
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353

Query: 357 HQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            +   L+EKM  + N  P+ VT+NTF+  L   G  D A++ L + ++     +   Y+ 
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++    R  R+ +A E+V E+   G   ++VTY ++++G+C+   V +A ++L +M   G
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            K + +++  ++   CK G    A ++++ +     W P+ I+Y+ L+ G    G   EA
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMN-MSEEDWWIPNAITYSVLMHGFRREGKSSEA 532

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
              +++M+ +G  P     N+L++SL
Sbjct: 533 CDLVREMIKKGFFPTPVEINLLIQSL 558



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 175/396 (44%), Gaps = 37/396 (9%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            +  ++ S    G +  ++ +L  M   G  P++    + +   ++G R  +A     RM
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA----------- 310
                 PNV+ Y+ LI G C    +++A+ +  +M    C P+  +Y             
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353

Query: 311 -----LIDGFAKAGNLLGASQIWNRMI--------------------SNGCSPNVVAYTC 345
                L++   K  NLL     +N  +                          + V Y+ 
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V   C+     +A  ++ +M  + C P+ VT+ + I GLC   +VD A K+L QM ++ 
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C PN  +Y  LL+GL +     EA E++   E+     N +TY+ ++HG  R G   EA 
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 533

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            L+ +M+ +G     +  N++I + C++ KV+ A + +++    G    +++++T+++ G
Sbjct: 534 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG-CAVNVVNFTTVIHG 592

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            C    ++ A   L  M      P+  T+  ++ +L
Sbjct: 593 FCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 628



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 161/320 (50%), Gaps = 13/320 (4%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + ++++S+ R G  ++A ++   +   G  P V  Y  +++ L  E +      +   M 
Sbjct: 411 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 470

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +PN  +Y  LL  LCKN     A +++         P+A++Y+ ++    + G+  
Sbjct: 471 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSS 530

Query: 153 EA----RELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EA    RE+  +  F + V + N LI  LC+E K++EA   + + ++ G   NV+ ++T+
Sbjct: 531 EACDLVREMIKKGFFPTPVEI-NLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTV 589

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C   ++E +L +L  M++   +P++ ++T+++      GR  EA+ L  +M+R G 
Sbjct: 590 IHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 649

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           +P  V Y T+IH  C  G +++ + +  +M     C    T Y+ +I+     GNL  A 
Sbjct: 650 IPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGNLEQAY 706

Query: 326 QIWNRMISNGCSPNVVAYTC 345
           ++  +++    +  + A TC
Sbjct: 707 KLLGKVLRT--ASKIDANTC 724



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 162/358 (45%), Gaps = 7/358 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  + ++ +M  +G       + SVIN   +    +QA KM  ++ + G KP    Y  
Sbjct: 424 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 483

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+ L           + +  + D   PN  TY++L+    +  +   A  L+ EM  KG
Sbjct: 484 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 543

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVSVYN--ALINGLCKEHKIEEAF 185
             P  V    ++ S+C+  +V+EA+   E  +  G  V+V N   +I+G C++  +E A 
Sbjct: 544 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 603

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL +M      P+V+TY+TII +L   G +E +  +  +M   G  P   ++ +++  Y
Sbjct: 604 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 663

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  +   L  +M+         AY+ +I  LCS G++++A  +  ++   +   + 
Sbjct: 664 CRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDA 721

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            T   LI+ +   G  L +  +  RM +    P++     + K L       +A  LI
Sbjct: 722 NTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 779


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/414 (33%), Positives = 224/414 (54%), Gaps = 1/414 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            +N L++GLC + KI +A  L  EMV  G +P+VITYSTII+ LC +GN   +L +L +M
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             +GC PN+ ++ +++          EA D ++ M++EG  P+V  YS+++HG C+ G +
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA S+  QM E +  PN  T++ LIDG  K   +  A  ++  M   G  P+V  Y  +
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           V   C  +   +A  L   M  + C PN  ++N  I G C  GR+D A  LL +M     
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I TY+ L+ G  +V R +EA EL+ E+   G+  N++TY+ +L G+C+ G + EAF+
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL  M     + +   + I+I   C  GK+  A +L   +   G   P +++YT ++ G+
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG-IQPTVVTYTVMISGL 370

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              G   EA    ++M   G  PN  T+NV+++    N      V ++++++  
Sbjct: 371 LKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 241/467 (51%), Gaps = 31/467 (6%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M + G++P + T+N LL  LC   ++  A KL  EM   G  PD ++Y+TI         
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTI--------- 51

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                                INGLCK      A  LL +M ++G  PNV+ Y+TII SL
Sbjct: 52  ---------------------INGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSL 90

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    V  ++    +M   G  P++ +++S+L G+   GR +EA+ L+ +M+    +PN 
Sbjct: 91  CKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNK 150

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V ++ LI GLC    + EA  V   M E    P+V TY+AL+DG+     +  A +++N 
Sbjct: 151 VTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNI 210

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   GC+PNV +Y  ++   C++    +A  L+ +M+ ++  P+  T++T ++G C  GR
Sbjct: 211 MDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGR 270

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              A +LL +M  Y  LPN+ TY+ +LDGL +   + EAFEL+  +++  I+ NI  Y  
Sbjct: 271 PQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTI 330

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G+C  G +  A +L   + ++G +   +T+ ++I    K G  N A +L   +   G
Sbjct: 331 LIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNG 390

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
              P+  +Y  ++ G   +G    A   +++M+ +G   + +T+ +L
Sbjct: 391 CL-PNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 228/434 (52%), Gaps = 5/434 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           + GL+PT+  +N +L  L ++ +      ++  M + G EP+V TY+ ++  LCK     
Sbjct: 3   KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALI 172
            A +LL +M  KGC P+ V+Y TI+ S+CK   V EA +             V  Y++++
Sbjct: 63  MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSIL 122

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G C   ++ EA  L  +MV+R + PN +T++ +I  LC    +  +  +   M  +G  
Sbjct: 123 HGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+++++ +L+ GY    +  EA  L+N M R+G  PNV +Y+ LI+G C +G +DEA  +
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M   S  P++ TYS L+ GF + G    A ++   M S G  PN++ Y+ ++  LC+
Sbjct: 243 LAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCK 302

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +    +A  L++ M      PN   +   I+G+C  G+++ A +L   +      P + T
Sbjct: 303 HGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVT 362

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  ++ GLL+     EA EL  E+   G   N  TYN I+ G  R G    A +L+ +M+
Sbjct: 363 YTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMV 422

Query: 473 IEGTKLDAITFNII 486
            +G   D+ TF ++
Sbjct: 423 GKGFSADSSTFRML 436



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 225/436 (51%), Gaps = 14/436 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L  K +I     L  +M   G       + ++IN   ++G    AL++  ++ E G
Sbjct: 16  LLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN I+D+L  +   +     +S M ++G+ P+VFTY+ +L   C   RV+ A 
Sbjct: 76  CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
            L  +M  +   P+ V++T ++  +CK   + EA    E     G    V  YNAL++G 
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +++EA  L   M  +G  PNV +Y+ +I+  C  G ++ + G+L +M  +   P+I
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++L++G+   GR  EA +L   M   G LPN++ YS ++ GLC +G +DEA  +   
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E+   PN+  Y+ LI+G    G L  A ++++ +   G  P VV YT M+  L +  +
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM---------KQYEC 406
            ++A  L  +MA   C PN+ T+N  I+G    G    A++L+++M           +  
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRM 435

Query: 407 LPNITTYNELLDGLLR 422
           L ++ + +E++   +R
Sbjct: 436 LSDLESSDEIISQFMR 451



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 201/372 (54%), Gaps = 1/372 (0%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M   G+ P ++T++T++S LC    +  ++ +  +M   G  P++ ++++++ G    G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
           T  A  L  +M  +G  PNVVAY+T+I  LC +  + EA+    +M +   PP+V TYS+
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++ GF   G +  A+ ++ +M+     PN V +T ++  LC+  M  +A  + E M  + 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+  T+N  + G C   ++D A KL + M +  C PN+ +YN L++G  +  R+ EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L+ E+    +  +I TY+T++ G C+ G   EA +LL +M   G   + IT++I++   
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK G ++ A +LL  ++   +  P+I  YT L+ G+C  G ++ A      +  +GI P 
Sbjct: 301 CKHGHLDEAFELLKAMQ-ESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359

Query: 551 FATWNVLVRSLF 562
             T+ V++  L 
Sbjct: 360 VVTYTVMISGLL 371


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 265/505 (52%), Gaps = 6/505 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A+ +F R+      P    +N+IL +L+   RF     +  ++   G+  ++ T NIL+
Sbjct: 52  DAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILI 111

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFG 162
              C   ++  ++ +L  +  +G  PD ++ TT++  +C  G+V++A +     +A+ F 
Sbjct: 112 NCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQ 171

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                Y  LINGLCK  + + A  L+  + +R I P+V+ Y+ II SLC    V  +  +
Sbjct: 172 LDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNL 231

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M  +   PN+ ++T+L+ G+ + G   EA  L N M  +   P+V  +S LI  L  
Sbjct: 232 YSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGK 291

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G M  A  V   M +    P+V TY++L+DG+     +  A  ++N M  +G +P V +
Sbjct: 292 EGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQS 351

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT M+  LC+  M  +A SL E+M  +N  PNT+TFN+ I GLC  GR+ +   L+D+M+
Sbjct: 352 YTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMR 411

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               L ++ TY+ L+D L +   + +A  L  ++    IQ ++ TY  ++ G+C+ G + 
Sbjct: 412 DRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLK 471

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            A ++   +LI+G  LD  T+ ++I  +CK G  + A+ LL ++   G   P+ I++  +
Sbjct: 472 IAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNG-CIPNAITFDII 530

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGI 547
           +  +       +A   L++M+  G+
Sbjct: 531 ICALFEKDENDKAEKLLREMIARGL 555



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 190/372 (51%), Gaps = 5/372 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN   ++G  + A+++   + E  +KP V +YN I+D+L           +YS M   
Sbjct: 179 TLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAK 238

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + PNV TY  L+   C    +  A  LL EM  K   PD  +++ ++ ++ K G+++ A
Sbjct: 239 QIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAA 298

Query: 155 R-ELAMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +  LA+   +     V  YN+L++G    ++++ A ++   M   G+ P V +Y+ +I  
Sbjct: 299 KIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDG 358

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC    V+ ++ +  +M  +   PN  +F SL+ G    GR     DL ++M     L +
Sbjct: 359 LCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLAD 418

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V+ YS+LI  LC N  +D+A+++  +M      P++ TY+ LIDG  K G L  A +++ 
Sbjct: 419 VITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQ 478

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            ++  G   ++  YT M+   C+  +F +A +L+ KM    C PN +TF+  I  L    
Sbjct: 479 HLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKD 538

Query: 390 RVDWAMKLLDQM 401
             D A KLL +M
Sbjct: 539 ENDKAEKLLREM 550



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 170/336 (50%), Gaps = 11/336 (3%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           +GE C       L  +M  + +  +   + ++I  +  +G   +A+ +   ++   + P 
Sbjct: 225 VGEACN------LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPD 278

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  ++ ++DAL  E +      + + M +  ++P+V TYN L+      N V  A  +  
Sbjct: 279 VYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFN 338

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS---VYNALINGLCKEH 179
            M   G  P   SYT ++  +CK   V+EA  L   M+  + +     +N+LI+GLCK  
Sbjct: 339 SMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSG 398

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           +I   + L+ +M DR    +VITYS++I +LC   +++ ++ +  +M  +   P+++++T
Sbjct: 399 RIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYT 458

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+ G   GGR   A +++  ++ +G+  ++  Y+ +I G C  G  DEA+++  +ME+N
Sbjct: 459 ILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDN 518

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            C PN  T+  +I    +      A ++   MI+ G
Sbjct: 519 GCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 1/276 (0%)

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           ++AV++  +M     PP    ++ ++    K      A  +   +   G + ++V    +
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C       + S++  +      P+ +T  T IKGLC  G V  A+K  D +   E 
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
             +  +Y  L++GL ++   K A +L+  +E+  I+ ++V YN I+  +C+  +V EA  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M  +    + +T+  +IY +C  G +  A+ LL+ ++     NPD+ +++ L+  +
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKN-INPDVYTFSILIDAL 289

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              G M+ A I L  M+   + P+  T+N LV   F
Sbjct: 290 GKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYF 325



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 130/272 (47%), Gaps = 5/272 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG++ ++   + +L  M    V      + S+++ Y  V   + A  +F  + + G
Sbjct: 285 LIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSG 344

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V+ Y  ++D L           ++  MK   + PN  T+N L+  LCK+ R+   +
Sbjct: 345 VTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVW 404

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            L+ +M ++    D ++Y++++ ++CK   +++A     + +       +  Y  LI+GL
Sbjct: 405 DLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGL 464

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++ A  +   ++ +G   ++ TY+ +IS  C  G  + +L +L +M   GC PN 
Sbjct: 465 CKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNA 524

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +F  ++          +A  L   MI  G L
Sbjct: 525 ITFDIIICALFEKDENDKAEKLLREMIARGLL 556



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 1/171 (0%)

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ L ++M      P    +N +L  L+++ R   A  L   ++  GI  ++VT N +++
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             C  G +  +F +L  +L  G   D IT   +I   C +G+V  A++  D +    E+ 
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVAL-EFQ 171

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            D ISY +L+ G+C  G  + A   ++ +    I P+   +N+++ SL  N
Sbjct: 172 LDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKN 222



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 34/243 (13%)

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +N  + A +L  +M     PP T  FN  +  L    R   A+ L   +       ++ T
Sbjct: 47  HNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVT 106

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
            N L++    + ++  +F ++  I K G   +++T  T++ G+C  G V +A +    ++
Sbjct: 107 LNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVV 166

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR------------------------- 507
               +LD I++  +I   CK G+   AIQL+  +                          
Sbjct: 167 ALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVG 226

Query: 508 ---------GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
                       +  P++++YT+L++G C  G + EA   L +M  + I P+  T+++L+
Sbjct: 227 EACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILI 286

Query: 559 RSL 561
            +L
Sbjct: 287 DAL 289


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 245/456 (53%), Gaps = 9/456 (1%)

Query: 95  GMEPNVF-TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           G+EP+       L+K LC + R   A ++L       C PD +SY  +V+  C  GQ++ 
Sbjct: 84  GLEPSAAGPCAALIKKLCASGRTAEARRVLA-----SCEPDVMSYNAMVAGYCVTGQLDN 138

Query: 154 AREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           AR L  AM        YN LI GLC   + + A  +L +M+ RG  P+V+TY+ ++ + C
Sbjct: 139 ARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATC 198

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
                + ++ +L +M  +GC P+I ++  ++ G    GR  +A +    +   G  PN V
Sbjct: 199 KRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTV 258

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           +Y+ ++ GLC+    ++A  +  +M     PPNV T++ LI    + G +  A +I +++
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              GC+PN ++Y  ++   C+     +A + +E M    C P+ V++NT +  LC  G V
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A++LL Q+K   C P + +YN ++DGL +  + +EA EL+ E+   G+Q +I+TY+TI
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
             G+CR G + EA +   K+   G + + + +N I+   CK+   ++AI L   +   G 
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNG- 497

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             P+  +YT L+ G+   G ++EA   + ++ + G+
Sbjct: 498 CMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 234/459 (50%), Gaps = 7/459 (1%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY-TTIVSSICKLGQVEEARELAMRFG 162
           N  L+ L +   ++ A +L+  M   G  P A      ++  +C  G+  EAR +     
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLASCE 117

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V  YNA++ G C   +++ A  L+  M    ++P+  TY+T+I  LC  G  + +L +
Sbjct: 118 PDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L  M  RGC P++ ++T LL+         +A  L + M  +G  P++V Y+ +++G+C 
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +D+A+     +    C PN  +Y+ ++ G   A     A ++   M   G  PNVV 
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +  ++  LC+  +   A  +++++    C PN++++N  +   C   ++D AM  ++ M 
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 354

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
              C P+I +YN LL  L R   V  A EL+ +++  G    +++YNT++ G+ +AG   
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           EA +LL +M+ +G + D IT++ I    C++G++  AI+   +++  G   P+ + Y ++
Sbjct: 415 EALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG-IRPNTVLYNAI 473

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L G+C       A      M++ G  PN +T+ +L+  L
Sbjct: 474 LLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGL 512



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/386 (33%), Positives = 204/386 (52%), Gaps = 5/386 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++  L    R      +  +M R G  P+V TY ILL+A CK +    A 
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KLL EM +KGCAPD V+Y  +V+ IC+ G+V++A E      S         YN ++ GL
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + E+A  L+ EM  +G  PNV+T++ +IS LC  G VE ++ IL Q+   GC PN 
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+  +L  +    +   A      M+  G  P++V+Y+TL+  LC  G +D AV + +Q
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +++  C P + +Y+ +IDG  KAG    A ++ N M++ G  P+++ Y+ +   LC+   
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGR 447

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A     K+      PNTV +N  + GLC       A+ L   M    C+PN +TY  
Sbjct: 448 IEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTI 507

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGI 441
           L++GL     VKEA E++ E+   G+
Sbjct: 508 LIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 229/439 (52%), Gaps = 18/439 (4%)

Query: 132 APDAVSYTTIVSS-----ICKLGQVEEARELAMRFG----SGVSVYNALINGLCKEHKIE 182
           AP+AV + +  S+     + + G +EEA  L         S      ALI  LC   +  
Sbjct: 48  APNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTA 107

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +L        +P+V++Y+ +++  C  G ++ +  ++  M +    P+ +++ +L+
Sbjct: 108 EARRVLA-----SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLI 159

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           +G    GRT  A  + + M+R G +P+VV Y+ L+   C      +AV +  +M +  C 
Sbjct: 160 RGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCA 219

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P++ TY+ +++G  + G +  A +    + S GC PN V+Y  ++K LC    +  A  L
Sbjct: 220 PDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKL 279

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M+ +  PPN VTFN  I  LC  G V+ AM++LDQ+ +Y C PN  +YN +L    +
Sbjct: 280 MAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCK 339

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             ++  A   V  +   G   +IV+YNT+L  +CR G V  A +LL ++  +G     I+
Sbjct: 340 QKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLIS 399

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N +I    K GK   A++LL+ +   G   PDII+Y+++  G+C  G ++EA     K+
Sbjct: 400 YNTVIDGLTKAGKTEEALELLNEMVTKG-LQPDIITYSTISSGLCREGRIEEAIKAFCKV 458

Query: 543 LNEGICPNFATWNVLVRSL 561
            + GI PN   +N ++  L
Sbjct: 459 QDMGIRPNTVLYNAILLGL 477



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 182/325 (56%), Gaps = 5/325 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           +QA+K+   +R+ G  P +  YN +++ +  E R         ++   G EPN  +YNI+
Sbjct: 204 KQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIV 263

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS 163
           LK LC   R + A KL+ EM  KG  P+ V++  ++S +C+ G VE A E+     ++G 
Sbjct: 264 LKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGC 323

Query: 164 GVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             +   YN +++  CK+ K++ A   +  MV  G  P++++Y+T++++LC  G V+ ++ 
Sbjct: 324 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVE 383

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L Q+  +GC P + S+ +++ G    G+T EA +L N M+ +G  P+++ YST+  GLC
Sbjct: 384 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLC 443

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G ++EA+    ++++    PN   Y+A++ G  K      A  ++  M+SNGC PN  
Sbjct: 444 REGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNES 503

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKM 366
            YT +++ L    +  +A  ++ ++
Sbjct: 504 TYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 173/333 (51%), Gaps = 9/333 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G +     +  V+N   + G  + A++    +  +G +P    YN +L  L 
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLC 268

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+     + + M R G  PNV T+N+L+  LC+   V+ A ++L ++   GC P+++
Sbjct: 269 TAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSL 328

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  I+ + CK  +++ A    EL +  G    +  YN L+  LC+  +++ A  LL ++
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 388

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            D+G  P +I+Y+T+I  L   G  E +L +L +M  +G  P+I +++++  G    GR 
Sbjct: 389 KDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRI 448

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA   + ++   G  PN V Y+ ++ GLC   +   A+ +   M  N C PN +TY+ L
Sbjct: 449 EEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTIL 508

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           I+G A  G +  A +    M++  CS  VV+ T
Sbjct: 509 IEGLAYEGLVKEARE----MMAELCSRGVVSKT 537



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 5/261 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  + L+ +M  +G   +   F  +I+   R GL E A+++  +I ++G  P    YN I
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L A   + +          M   G  P++ +YN LL ALC+   VD A +LL ++ +KGC
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            P  +SY T++  + K G+ EEA EL            +  Y+ + +GLC+E +IEEA  
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIK 453

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
             C++ D GI PN + Y+ I+  LC      +++ +   M   GC PN  ++T L++G  
Sbjct: 454 AFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLA 513

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             G   EA ++   +   G +
Sbjct: 514 YEGLVKEAREMMAELCSRGVV 534



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 15/238 (6%)

Query: 329 NRMISNGCSPNVVAYTCM-----VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           N   +   +PN V +        ++VL +     +A  L+E MA    P         IK
Sbjct: 40  NLAYAGAVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGLE-PSAAGPCAALIK 98

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
            LC  GR   A ++L       C P++ +YN ++ G     ++  A  LV  +    ++ 
Sbjct: 99  KLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEP 150

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +  TYNT++ G+C  G    A  +L  ML  G   D +T+ I++ A CK+     A++LL
Sbjct: 151 DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLL 210

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D +R  G   PDI++Y  ++ GIC  G + +A  +L+ + + G  PN  ++N++++ L
Sbjct: 211 DEMRDKG-CAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 77/164 (46%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL Q+K +G +     + +VI+   + G  E+AL++   +   GL+P +  Y+
Sbjct: 377 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYS 436

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I   L  E R       +  ++  G+ PN   YN +L  LCK      A  L   M + 
Sbjct: 437 TISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN 496

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALIN 173
           GC P+  +YT ++  +   G V+EARE+     S   V   L+N
Sbjct: 497 GCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVN 540



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 12/165 (7%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV-TYNTILHGVCRAGMVVEAFQLLGKML 472
           N+ L  L+R   ++EA  LV  +   G++ +       ++  +C +G   EA ++L    
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESM--AGLEPSAAGPCAALIKKLCASGRTAEARRVLA--- 114

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
               + D +++N ++  YC  G+++NA +L+  +       PD  +Y +L+ G+C  G  
Sbjct: 115 --SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAM----PMEPDTYTYNTLIRGLCGRGRT 168

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
             A   L  ML  G  P+  T+ +L+ +     G+   V +LD++
Sbjct: 169 DNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/557 (29%), Positives = 276/557 (49%), Gaps = 9/557 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L +     G + +L+ M    +      F  V+ SY R G    A+K+   +++ G
Sbjct: 252 MLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLTLMQKAG 311

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + I N  +  L+  N           M   G+ PNV TYN L+K  C  ++VD A 
Sbjct: 312 VEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAM 371

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +L+ +M +KGC+PD VSY T++  +C+  ++ E REL  +  +   +      YN+LI  
Sbjct: 372 ELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQM 431

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K    +EA  +L E        + + YS I+ + C  G ++ +  ++ +MF +GC+P+
Sbjct: 432 LSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPD 491

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++TS+L G+   G+  +A  +  +M +    PN V Y+T ++GLC NG   EA  +  
Sbjct: 492 VVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMN 551

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             EE    PN  TYS ++ G  + G L  A  +   MI  G  PN V    +V  LC++ 
Sbjct: 552 MSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDG 611

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A+ L+++   + C  N V F T I G C    ++ A+ LLD M      P+  TY 
Sbjct: 612 KPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYT 671

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D L + +R++EA EL  ++ + G+  + VTY +++H  CR G V +  +LL KML++
Sbjct: 672 ALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLK 731

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
                A  +N++I   CK G +  A  LL  +        D  +   L+    N G    
Sbjct: 732 SRFQTA--YNLVIEKLCKFGYLEEANSLLGEVLRTAS-RTDAKTCHVLMESYLNVGIPMS 788

Query: 535 AFIYLQKMLNEGICPNF 551
           A+    +M N  + P+ 
Sbjct: 789 AYKVACRMFNRNLIPDL 805



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 250/464 (53%), Gaps = 11/464 (2%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCA--PDAVSYTTIVSSICKLGQVEEA-RELAM 159
           Y ++L+ L K     GA ++L  M  +     P+A  +  +  S  + G++ +A + L +
Sbjct: 249 YLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMV--SYSRAGRLRDAMKVLTL 306

Query: 160 RFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              +GV    S+ N  I+ L   +++++A      MV  GI PNV+TY+ +I   C+V  
Sbjct: 307 MQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQ 366

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVAYS 274
           V+ ++ ++ QM  +GC+P+  S+ +++       R +E  +L  +M  +   LP+ V Y+
Sbjct: 367 VDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYN 426

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +LI  L  +G  DEA+ +  + E+     +   YSA++  + K G +  A ++ + M S 
Sbjct: 427 SLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSK 486

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GC P+VV YT ++   C+     QA  ++++M   +C PN VT+ TF+ GLC  G+   A
Sbjct: 487 GCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEA 546

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            K+++  ++    PN  TY+ ++ GL R  ++ EA ++V E+   G   N V  N ++H 
Sbjct: 547 RKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHS 606

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +CR G   EA QLL + + +G  ++ + F  +I+ +C++  +  A+ LLD +    + +P
Sbjct: 607 LCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNK-HP 665

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           D ++YT+L+  +  +  ++EA     KML +G+ P+  T+  ++
Sbjct: 666 DTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVI 709



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 195/438 (44%), Gaps = 37/438 (8%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R+    SVY  ++  L K    + A  +L  M  R I      +  ++ S    G +  +
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDA 300

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +L  M   G  PN+    + +   ++G    +A     RM+  G  PNVV Y+ LI G
Sbjct: 301 MKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNV---------------------------------- 305
            C+   +D+A+ +  QM    C P+                                   
Sbjct: 361 YCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLP 420

Query: 306 --TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
              TY++LI   +K G+   A +I           + V Y+ +V   C+     +A  L+
Sbjct: 421 DHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELV 480

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M  + C P+ VT+ + + G C  G++D A K++ QM ++ C PN  TY   L+GL R 
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRN 540

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +  EA +++   E+     N +TY+ ++HG+ R G + EA  ++ +M+ +G   + +  
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N+++++ C+ GK   A QLL      G    +++++T+++ G C    ++ A   L  M 
Sbjct: 601 NLLVHSLCRDGKPREANQLLKECMNKG-CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 659

Query: 544 NEGICPNFATWNVLVRSL 561
                P+  T+  L+ +L
Sbjct: 660 LCNKHPDTVTYTALIDAL 677



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/428 (21%), Positives = 187/428 (43%), Gaps = 76/428 (17%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ ++ L+++M+ +     + V + S+I    + G  ++AL++     +   K     Y+
Sbjct: 402 LNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYS 461

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+ A   E +      + S M   G +P+V TY  +L   C+  ++D A K++ +M   
Sbjct: 462 AIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKH 521

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---------------------AMR-------- 160
            C P+AV+YTT ++ +C+ G+  EAR++                      +R        
Sbjct: 522 HCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEA 581

Query: 161 ------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                       F + V + N L++ LC++ K  EA  LL E +++G   NV+ ++T+I 
Sbjct: 582 CDVVREMIGKGFFPNPVEI-NLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIH 640

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C   ++E +L +L  M++   +P+  ++T+L+       R  EA++L  +M+R+G +P
Sbjct: 641 GFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVP 700

Query: 269 NVV---------------------------------AYSTLIHGLCSNGSMDEAVSVSYQ 295
           + V                                 AY+ +I  LC  G ++EA S+  +
Sbjct: 701 SPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGE 760

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +   +   +  T   L++ +   G  + A ++  RM +    P++     + K L     
Sbjct: 761 VLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGK 820

Query: 356 FHQAHSLI 363
             +A  L+
Sbjct: 821 LEEADRLV 828



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 9/177 (5%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P+  TY  L+ AL K +R++ A +L ++M  +G  P  V+Y +++   C+ G+VE+  +
Sbjct: 664 HPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLK 723

Query: 157 LAM------RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           L        RF +    YN +I  LCK   +EEA  LL E++      +  T   ++ S 
Sbjct: 724 LLKKMLLKSRFQTA---YNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +VG   ++  +  +MF R   P++     + K  ++ G+  EA  L  R +  G +
Sbjct: 781 LNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHV 837


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 251/464 (54%), Gaps = 5/464 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           +L +  ++ + G +P++   + +L+      R S    +   M   G  P+  T+  L+ 
Sbjct: 63  SLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 122

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGS 163
            L  +N+   A  L+  M  +GC P+ V+Y  +V+ +CK G ++ A  L     A +  +
Sbjct: 123 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 182

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            V ++N +I+ LCK   +++A  L  EM  +GI PNV+TYS++IS LC  G    +  +L
Sbjct: 183 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 242

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +  NPN+ +F +L+  ++  G+  EA  L + MI+    P++  Y++LI+G C +
Sbjct: 243 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 302

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +D+A  +   M    C P++ TY+ LI GF K+  +   ++++  M   G   + V Y
Sbjct: 303 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 362

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T +++ L  +     A  + ++M  +  PP+ +T++  + GLC  G+++ A+++ D M++
Sbjct: 363 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 422

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
            E   +I  Y  +++G+ +  +V + ++L   +   G++ N+VTYNT++ G+C   ++ E
Sbjct: 423 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 482

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           A+ LL KM  +G   D+ T+N +I A+ + G    + +L+  +R
Sbjct: 483 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 526



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 244/500 (48%), Gaps = 33/500 (6%)

Query: 63  PTVKIYNHILDALLAENRFSMIN--PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           P++  +N +L A+    +F ++    +   M + G EP++ T + LL   C   R+  A 
Sbjct: 40  PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L+ +M   G  PD +++TT                              LI+GL   +K
Sbjct: 100 ALVDQMVEMGYRPDTITFTT------------------------------LIHGLFLHNK 129

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             EA  L+  MV RG  PN++TY  +++ LC  G+++ +  +L +M       ++  F +
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++          +A +L+  M  +G  PNVV YS+LI  LCS G   +A  +   M E  
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN+ T++ALID F K G  + A ++ + MI     P++  Y  ++   C ++   +A 
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            + E M  ++C P+  T+NT IKG C   RV+   +L  +M     + +  TY  L+ GL
Sbjct: 310 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                   A ++  ++   G+  +I+TY+ +L G+C  G + +A ++   M     KLD 
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
             +  +I   CK GKV++   L   +   G   P++++Y +++ G+C+   +QEA+  L+
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYALLK 488

Query: 541 KMLNEGICPNFATWNVLVRS 560
           KM  +G  P+  T+N L+R+
Sbjct: 489 KMKEDGPLPDSGTYNTLIRA 508



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 236/460 (51%), Gaps = 8/460 (1%)

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVS 166
           K+ ++D A  L   M      P    +  ++S+I K+ + +    LA     M+ G   S
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 167 V--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           +   ++L+NG C   +I +A  L+ +MV+ G  P+ IT++T+I  L        ++ ++ 
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RGC PN+ ++  ++ G    G    A +L N+M       +VV ++T+I  LC   
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D+A+++  +ME     PNV TYS+LI      G    ASQ+ + MI    +PN+V + 
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++    +   F +A  L + M   +  P+  T+N+ I G C   R+D A ++ + M   
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           +C P++ TYN L+ G  +  RV++  EL  E+   G+  + VTY T++ G+   G    A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            ++  +M+ +G   D +T++I++   C  GK+  A+++ D ++   E   DI  YT+++ 
Sbjct: 379 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIE 437

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G+C +G + + +     +  +G+ PN  T+N ++  L S 
Sbjct: 438 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 477



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM   G       F ++I+       A +A+ +  R+ + G +P +  Y  +++ L 
Sbjct: 101 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 160

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +   + + M+   +E +V  +N ++ +LCK   VD A  L  EM  KG  P+ V
Sbjct: 161 KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 220

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++S +C  G+  +A +L       +    +  +NALI+   KE K  EA  L  +M
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R IDP++ TY+++I+  C    ++ +  +   M  + C P++ ++ +L+KG+    R 
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            + ++L+  M   G + + V Y+TLI GL  +G  D A  V  QM  +  PP++ TYS L
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 400

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG    G L  A ++++ M  +    ++  YT M++ +C+         L   ++ +  
Sbjct: 401 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 460

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+NT I GLC    +  A  LL +MK+   LP+  TYN L+   LR      + E
Sbjct: 461 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 520

Query: 432 LVTEIEKC 439
           L+ E+  C
Sbjct: 521 LIREMRSC 528



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 203/400 (50%), Gaps = 6/400 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N   + G  + A  +  ++    ++  V I+N I+D+L           ++  M+  G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LC   R   A +LL +M  K   P+ V++  ++ +  K G+  EA 
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 274

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L            +  YN+LING C   ++++A  +   MV +   P++ TY+T+I   
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 334

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C    VE    +  +M  RG   +  ++T+L++G    G    A  ++ +M+ +G  P++
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + YS L+ GLC+NG +++A+ V   M+++    ++  Y+ +I+G  KAG +     ++  
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 454

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G  PNVV Y  M+  LC   +  +A++L++KM  +   P++ T+NT I+     G 
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + +L+ +M+    + + +T   L+  +L   R+ ++F
Sbjct: 515 KAASAELIREMRSCRFVGDASTIG-LVANMLHDGRLDKSF 553



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 181/338 (53%), Gaps = 5/338 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++M+ +G+  +   + S+I+     G    A ++   + E  
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  +N ++DA + E +F     ++ +M +  ++P++FTYN L+   C ++R+D A 
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 309

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
           ++   M +K C PD  +Y T++   CK  +VE+     RE++ R   G +V Y  LI GL
Sbjct: 310 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             +   + A  +  +MV  G+ P+++TYS ++  LC+ G +E +L +   M       +I
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           + +T++++G    G+  +  DL+  +  +G  PNVV Y+T+I GLCS   + EA ++  +
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           M+E+   P+  TY+ LI    + G+   ++++   M S
Sbjct: 490 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 527



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 182/371 (49%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ +ID    LL +M+   +     +F ++I+S  +    + AL +F  +   G
Sbjct: 155 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 214

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y+ ++  L +  R+S  + + S+M    + PN+ T+N L+ A  K  +   A 
Sbjct: 215 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 274

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL  +M  +   PD  +Y ++++  C   ++++A+++     S      +  YN LI G 
Sbjct: 275 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 334

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+   L  EM  RG+  + +TY+T+I  L   G+ + +  +  QM   G  P+I
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++ LL G    G+  +A ++++ M +     ++  Y+T+I G+C  G +D+   +   
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 454

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      PNV TY+ +I G      L  A  +  +M  +G  P+   Y  +++   ++  
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514

Query: 356 FHQAHSLIEKM 366
              +  LI +M
Sbjct: 515 KAASAELIREM 525



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    + D  Q + +QM  +GV      +  +++     G  E+AL++F  +++  
Sbjct: 365 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 424

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  + IY  +++ +    +      ++ ++   G++PNV TYN ++  LC    +  AY
Sbjct: 425 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 484

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA----LINGLC 176
            LL +M   G  PD+ +Y T++ +  + G    + EL     S   V +A    L+  + 
Sbjct: 485 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 544

Query: 177 KEHKIEEAF 185
            + +++++F
Sbjct: 545 HDGRLDKSF 553


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 267/521 (51%), Gaps = 10/521 (1%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRDGME 97
           S+R +   + AL  F  +      P +  +  +L A++   ++   +  +   M+  G+ 
Sbjct: 74  SFRNI---DDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLS 130

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN++T +IL+       RVD A+ +L ++   G  P  V++TT+++ +CK+G+  +A EL
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190

Query: 158 -----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                A      V  Y  +INGLCK  +   A  LL +M + G  PNV+TYSTII S   
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRK 250

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              V  +L I   M V+G +P+I ++ SL++G     +  EAS L N M     +P++V 
Sbjct: 251 DRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVT 310

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           ++ L+  +C  G + EA  V   M E    P+V TYS+L+ G++    ++ A ++++ MI
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI 370

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           + GC P+V +Y  ++   C+     +A  L  +M  +   PN V++NT I GLC  G + 
Sbjct: 371 TKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLR 430

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  L   M     LPN+ TY+ LLDG  +     +AF L   ++    + N+V YN ++
Sbjct: 431 EARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C++G + +A +L  ++ ++G + +A  +  II   CK+G ++ A++    +   G  
Sbjct: 491 DAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG-C 549

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            PD ISY  ++ G  +      A   + +M ++G   +  T
Sbjct: 550 PPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/476 (29%), Positives = 240/476 (50%), Gaps = 5/476 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L +QM++ G+S +      +IN +  +   + A  +  +I + GL+PT+  +  +
Sbjct: 115 DTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTL 174

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L    +F+    ++ +M   G  P+V+TY  ++  LCK      A  LL +M   GC
Sbjct: 175 INWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGC 234

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFW 186
            P+ V+Y+TI+ S  K  +V EA ++       G+S     YN+LI GLC   + +EA  
Sbjct: 235 QPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASA 294

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           LL EM    I P+++T++ ++ ++C  G V  + G+L  M   G  P++ +++SL+ GY 
Sbjct: 295 LLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYS 354

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           L     EA  L++ MI +G  P+V +Y+ LI+G C    +DEA  +  +M      PN  
Sbjct: 355 LRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNV 414

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y+ LI G  + G+L  A  ++  M +NG  PN+  Y+ ++   C+   F +A  L   M
Sbjct: 415 SYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 PN V +N  I  +C  G +  A KL  ++      PN   Y  +++GL +   +
Sbjct: 475 QSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLL 534

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            EA E    +E+ G   + ++YN I+ G         A QL+G+M  +G   D  T
Sbjct: 535 DEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 215/400 (53%), Gaps = 3/400 (0%)

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV-ETSLGILGQMFVRGCNPN 234
           C    I++A      M+ R   P +I ++ ++S++  +G   +T + +  QM + G +PN
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I++ + L+  +    R   A  +  ++I+ G  P +V ++TLI+ LC  G   +A+ +  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M    C P+V TY+ +I+G  K G    A+ +  +M   GC PNVV Y+ ++    ++ 
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             ++A  +   M  +   P+  T+N+ I+GLC   +   A  LL++M+    +P+I T+N
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D + +  +V EA  ++  + + G++ ++VTY+++++G      VVEA +L   M+ +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G K D  ++NI+I  YCK  +++ A QL + +   G   P+ +SY +L+ G+C  G ++E
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG-LTPNNVSYNTLIHGLCQLGSLRE 431

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           A    + M   G  PN  T+++L+   F   G+ G  + L
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDG-FCKQGYFGKAFRL 470



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 5/275 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ + ++ ++   Q +L+ M   GV      + S++  Y       +A K+F  +   G
Sbjct: 314 LVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG 373

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN +++      R      +++ M   G+ PN  +YN L+  LC+   +  A 
Sbjct: 374 CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREAR 433

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGL 175
            L   M   G  P+  +Y+ ++   CK G   +A  L     S  S     +YN LI+ +
Sbjct: 434 NLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAM 493

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + +A  L  E+  +G+ PN   Y+TII+ LC  G ++ +L     M   GC P+ 
Sbjct: 494 CKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDE 553

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
            S+  +++G+L       A  L   M  +GF+ +V
Sbjct: 554 ISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 7/199 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID  + L  +M  +G++ +   + ++I+   ++G   +A  +F  +   G  P +  Y+
Sbjct: 393 RIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYS 452

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD    +  F     ++  M+    +PN+  YNIL+ A+CK+  +  A KL  E+  K
Sbjct: 453 ILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK 512

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG------VSVYNALINGLCKEHKIEE 183
           G  P+A  YTTI++ +CK G ++EA E              +S YN +I G         
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEIS-YNVIIRGFLHHKDESR 571

Query: 184 AFWLLCEMVDRGIDPNVIT 202
           A  L+ EM D+G   +V T
Sbjct: 572 AVQLIGEMRDKGFIADVGT 590


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 279/584 (47%), Gaps = 40/584 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M   G   +   F  +I  Y R     +AL++   + +  L P+   Y  +++ L 
Sbjct: 301 ILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 360

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S+ N +   M   G++PNV  Y+ L+       R++ A +LL  M   G APD  
Sbjct: 361 HCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIF 420

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I+S + K G++EEA    +   G G+      + A I G  K  K+ EA     EM
Sbjct: 421 CYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 480

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D G+ PN   Y+ +I+     GN+  +L I   +   G  P++ + ++ + G L  GR 
Sbjct: 481 LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRV 540

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +++ +  +G +P+V  YS+LI G C  G +++A  +  +M      PN+  Y+AL
Sbjct: 541 QEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNAL 600

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K+G++  A ++++ M   G  P+ V Y+ M+   C++    +A SL  +M  +  
Sbjct: 601 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 660

Query: 372 PPN----------------------------------TVTFNTFIKGLCGCGRVDWAMKL 397
            P+                                  T++FNT I G C   ++  A +L
Sbjct: 661 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQL 720

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M   + +P+  TY  ++D   +  +++EA  L  E+++  + ++ VTY ++++G  +
Sbjct: 721 FQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNK 780

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G   E F L  KM+ +G K D +T+ ++IYA+CK+  +  A +L D + G G      I
Sbjct: 781 LGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 840

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +  L+  +C    + EA   L +M   G+ P+ A  + LVRS 
Sbjct: 841 -HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 883



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 277/565 (49%), Gaps = 11/565 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+    + +ID V  +   M   G+  +   +  +I+   + G  E+A ++   +   G
Sbjct: 250 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG 309

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP  + +  +++    E+       +   M++  + P+  +Y  ++  LC    +  A 
Sbjct: 310 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 369

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
           KLL +M   G  P+ V Y+T++      G++EEAR L      SGV+     YNA+I+ L
Sbjct: 370 KLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 429

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K+EEA   L E+  RG+ P+ +T+   I      G +  +     +M   G  PN 
Sbjct: 430 SKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 489

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T L+ G+   G   EA  ++  +   G LP+V   S  IHGL  NG + EA+ V  +
Sbjct: 490 PLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSE 549

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ++E    P+V TYS+LI GF K G +  A ++ + M   G +PN+  Y  +V  LC++  
Sbjct: 550 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 609

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L + M  +   P++VT++T I G C    V  A  L  +M      P+   YN 
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  +   +++A  L  E+ + G    + ++NT++ G C++  + EA QL  +M+ + 
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQ 728

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQ 533
              D +T+  +I  +CK GK+  A  L   ++   E N   D ++YTSL++G    G   
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ---ERNLIVDTVTYTSLMYGYNKLGQSS 785

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
           E F   +KM+ +G+ P+  T+ +++
Sbjct: 786 EVFALFEKMVAKGVKPDEVTYGLVI 810



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 165/580 (28%), Positives = 275/580 (47%), Gaps = 43/580 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R     +A   F  +++ GLKP     + ++D  + E     +  I   M   G+  N+ 
Sbjct: 221 RAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLI 280

Query: 102 TYNILLKALCK---------------------NNR-----VDG---------AYKLLVEM 126
           TYN+L+  LCK                     N+R     ++G         A +LL EM
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEM 340

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKI 181
             +   P AVSY  +++ +C    +  A +L   M F      V VY+ LI G   E +I
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           EEA  LL  M   G+ P++  Y+ IIS L   G +E +   L ++  RG  P+  +F + 
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + GY   G+  EA+  ++ M+  G +PN   Y+ LI+G    G++ EA+S+   +     
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+V T SA I G  K G +  A ++++ +   G  P+V  Y+ ++   C+     +A  
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L ++M  +   PN   +N  + GLC  G +  A KL D M +    P+  TY+ ++DG  
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   V EAF L  E+   G+Q +   YN ++HG C+ G + +A  L  +ML +G     +
Sbjct: 641 KSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTL 699

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           +FN +I  YCK  K+  A QL   +    +  PD ++YT+++   C +G M+EA +  ++
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMI-AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKE 758

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           M    +  +  T+  L+   ++ LG    V+ L + M  K
Sbjct: 759 MQERNLIVDTVTYTSLMYG-YNKLGQSSEVFALFEKMVAK 797



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 268/550 (48%), Gaps = 25/550 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIR------------------EFGLKPTVKIYNHILD 73
           VF  +I+SY+R+G+ ++A  +F+  +                  E GL P    Y  I  
Sbjct: 158 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITA 217

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    R +     +  M++ G++P+    + L+    +   +D   ++   M + G   
Sbjct: 218 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 277

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           + ++Y  ++  +CK G++E+A E+      +        +  LI G C+EH +  A  LL
Sbjct: 278 NLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL 337

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM  R + P+ ++Y  +I+ LC   ++  +  +L +M   G  PN+  +++L+ GY   
Sbjct: 338 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASE 397

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR  EA  L + M   G  P++  Y+ +I  L   G M+EA +   +++     P+  T+
Sbjct: 398 GRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTF 457

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
            A I G++K G +  A++ ++ M+ +G  PN   YT ++    +     +A S+   +  
Sbjct: 458 GAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHA 517

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+  T + FI GL   GRV  A+K+  ++K+   +P++ TY+ L+ G  +   V++
Sbjct: 518 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEK 577

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           AFEL  E+   GI  NI  YN ++ G+C++G +  A +L   M  +G + D++T++ +I 
Sbjct: 578 AFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMID 637

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            YCK   V  A  L   +   G   P    Y +L+ G C  G M++A    ++ML +G  
Sbjct: 638 GYCKSENVAEAFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA 696

Query: 549 PNFATWNVLV 558
               ++N L+
Sbjct: 697 TTL-SFNTLI 705



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 215/442 (48%), Gaps = 6/442 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
             +M   G+  +  ++  +IN + + G   +AL +F  +   G+ P V+  +  +  LL 
Sbjct: 477 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 536

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
             R      ++S +K  G+ P+VFTY+ L+   CK   V+ A++L  EM  KG AP+   
Sbjct: 537 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 596

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  +V  +CK G ++ AR+L               Y+ +I+G CK   + EAF L  EM 
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            +G+ P+   Y+ ++   C  G++E ++ +  +M  +G    + SF +L+ GY    +  
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 715

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EAS L+  MI +  +P+ V Y+T+I   C  G M+EA  +  +M+E +   +  TY++L+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G+ K G       ++ +M++ G  P+ V Y  ++   C+ +   +A  L +++  +   
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
                 +  I  LC    +  A KLLD+M +    P++   + L+       ++ EA  +
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895

Query: 433 VTEIEKCGIQLNIVTYNTILHG 454
              ++  G+  +  T   +++G
Sbjct: 896 FEGVKSLGLVPDTTTLIDLVNG 917



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/581 (24%), Positives = 262/581 (45%), Gaps = 75/581 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M   G+  +  V+ ++I  Y   G  E+A ++   +   G+ P +  YN I+  L 
Sbjct: 371 LLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 430

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    +     ++  G++P+  T+   +    K  ++  A K   EM + G  P+  
Sbjct: 431 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490

Query: 137 SYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YT +++   K G + EA    R L A+     V   +A I+GL K  +++EA  +  E+
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            ++G+ P+V TYS++IS  C  G VE +  +  +M ++G  PNI  + +L+ G    G  
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L++ M  +G  P+ V YST+I G C + ++ EA S+ ++M      P+   Y+AL
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670

Query: 312 ----------------------------------IDGFAKAGNLLGASQIWNRMISNGCS 337
                                             IDG+ K+  +  ASQ++  MI+    
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ V YT ++   C+     +A+ L ++M   N   +TVT+ + + G             
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG------------- 777

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
                          YN+L        +  E F L  ++   G++ + VTY  +++  C+
Sbjct: 778 ---------------YNKL-------GQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCK 815

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
              +VEAF+L  +++ +G        +++I A CK+  +  A +LLD +   G   P + 
Sbjct: 816 EDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG-LKPSLA 874

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + ++L+     +G M EA    + + + G+ P+  T   LV
Sbjct: 875 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLV 915



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 224/458 (48%), Gaps = 7/458 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           YLL+ ++  G+      F + I  Y + G   +A K F  + + GL P   +Y  +++  
Sbjct: 441 YLLE-IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                      I+ ++   G+ P+V T +  +  L KN RV  A K+  E+  KG  PD 
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            +Y++++S  CK G+VE+A EL            + +YNAL++GLCK   I+ A  L   
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G++P+ +TYST+I   C   NV  +  +  +M  +G  P+   + +L+ G    G 
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A +L+  M+++GF    ++++TLI G C +  + EA  +  +M      P+  TY+ 
Sbjct: 680 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +ID   KAG +  A+ ++  M       + V YT ++    +     +  +L EKM  + 
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+   I   C    +  A KL D++     L   T ++ L+  L +   + EA 
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +L+ E+ + G++ ++   +T++     AG + EA ++ 
Sbjct: 859 KLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 896



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 164/326 (50%), Gaps = 10/326 (3%)

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G +PN   Y+ +  GLC    M+EA     +M++    P+    SALIDGF + G+
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +    +I + M+S G   N++ Y  ++  LC+     +A  +++ M    C PN+ TF  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I+G C    +  A++LLD+M++   +P+  +Y  +++GL     +  A +L+ ++   G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++ N+V Y+T++ G    G + EA +LL  M   G   D   +N II    K GK+  A 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
             L  I+G G   PD +++ + + G   +G M EA  Y  +ML+ G+ PN   + VL+  
Sbjct: 440 TYLLEIQGRG-LKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498

Query: 561 LF---------SNLGHLGPVYILDDI 577
            F         S   HL  + +L D+
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDV 524



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 200/424 (47%), Gaps = 39/424 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  ++K +G+      + S+I+ + + G  E+A ++   +   G+ P + IYN ++D L 
Sbjct: 546 VFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLC 605

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     ++  M   G+EP+  TY+ ++   CK+  V  A+ L  EM +KG  P + 
Sbjct: 606 KSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF 665

Query: 137 SYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            Y  +V   CK G +E+A    RE+  +  +    +N LI+G CK  KI+EA  L  EM+
Sbjct: 666 VYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMI 725

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            + I P+ +TY+T+I   C  G +E +  +  +M  R    +  ++TSL+ GY   G++ 
Sbjct: 726 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSS 785

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           E   L+ +M+ +G  P+ V Y  +I+  C   ++ EA  +  ++         T +  LI
Sbjct: 786 EVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLI 845

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
               K  +L  AS++ + M   G  P++ A + +V+       FH+A             
Sbjct: 846 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS------FHEA------------- 886

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
                           G++D A ++ + +K    +P+ TT  +L++G L     ++A  L
Sbjct: 887 ----------------GKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930

Query: 433 VTEI 436
           + ++
Sbjct: 931 IKQL 934



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 119/258 (46%), Gaps = 6/258 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    L ++M  +G + +   F ++I+ Y +    ++A ++F  +    + P    Y 
Sbjct: 679 DMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYT 737

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D      +    N ++  M+   +  +  TY  L+    K  +    + L  +M  K
Sbjct: 738 TVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK 797

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGLCKEHKIEEA 184
           G  PD V+Y  ++ + CK   + EA +L     G G+    ++++ LI  LCK   + EA
Sbjct: 798 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 857

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM + G+ P++   ST++ S  + G ++ +  +   +   G  P+  +   L+ G
Sbjct: 858 SKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917

Query: 245 YLLGGRTHEASDLWNRMI 262
            L    + +A +L  +++
Sbjct: 918 NLNDTDSEDARNLIKQLV 935


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 245/492 (49%), Gaps = 18/492 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++MK  G+      +  +++S+ + GL EQA K F  +RE G  P V  Y  ++ A L
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + S  N ++  M  +G  PN+ TY+ L+   CK  +V+ A ++   M      PD  
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y           Q ++  E        V  Y AL++G CK H++EEA  LL  M   G 
Sbjct: 625 MY---------FKQYDDNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I  LC VG ++ +  +  +M   G    +++++SL+  Y    R   AS 
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+     PNVV Y+ +I GLC  G  DEA  +   MEE  C PNV TY+A+IDGF 
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
             G +    ++  RM S G +PN V Y  ++   C+N     AH+L+E+M   + P +T 
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   I+G         ++ LLD++ Q +  P ++ Y  L+D L++  R++ A  L+ E+
Sbjct: 851 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908

Query: 437 EKCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
                 L     TYN+++  +C A  V  AFQL  +M  +G   +  +F  +I    +  
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 495 KVNNAIQLLDRI 506
           K++ A+ LLD I
Sbjct: 969 KISEALLLLDFI 980



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 259/529 (48%), Gaps = 30/529 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN------ 113
           G  P+ KI+N ++ A       S    +   M + G  P    YNIL+ ++C +      
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVY 168
           + +D A K   EM   G   + ++ ++    +C  G+ E+A    RE+    F    S Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           + ++N LC   K+E AF L  EM   G+  +V TY+ ++ S C  G +E +     +M  
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC PN+ ++T+L+  YL   +   A++L+  M+ EG LPN+V YS LI G C  G +++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 289 AVSVSYQM----------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           A  +  +M                ++NS  PNV TY AL+DGF K+  +  A ++ + M 
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC PN + Y  ++  LC+     +A  +  +M+    P    T+++ I       R D
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A K+L +M +  C PN+  Y E++DGL +V +  EA++L+  +E+ G Q N+VTY  ++
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G    G +    +LL +M  +G   + +T+ ++I   CK G ++ A  LL+ ++    W
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTHW 845

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                 Y  ++ G   +    E+   L ++  +   P  + + +L+ +L
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 175/637 (27%), Positives = 292/637 (45%), Gaps = 73/637 (11%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++   + +L  M +EG   S  +F S++++Y   G    A K+  ++ + G  P   +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409

Query: 68  YNHILDAL-------------LAENRFS-------MINPI-YSNMKR------------- 93
           YN ++ ++             LAE  +S       ++N I  S+  R             
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 94  -------DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
                   G  P+  TY+ +L  LC  ++++ A+ L  EM   G   D  +YT +V S C
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529

Query: 147 KLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G +E+AR+    MR       V  Y ALI+   K  K+  A  L   M+  G  PN++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGC--------------------NPNIHSFTSL 241
           TYS +I   C  G VE +     Q+F R C                     PN+ ++ +L
Sbjct: 590 TYSALIDGHCKAGQVEKAC----QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L G+    R  EA  L + M  EG  PN + Y  LI GLC  G +DEA  V  +M E+  
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           P  + TYS+LID + K      AS++ ++M+ N C+PNVV YT M+  LC+     +A+ 
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L++ M  + C PN VT+   I G    G+++  ++LL++M      PN  TY  L+D   
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +  A  L+ E+++     +   Y  ++ G  +    +E+  LL ++  + T     
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 883

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS-YTSLLWGICNSGGMQEAFIYLQ 540
            + ++I    K  ++  A++LL+ +        D  S Y SL+  +C +  ++ AF    
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +M  +G+ P   ++  L++ LF N      + +LD I
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 167/674 (24%), Positives = 275/674 (40%), Gaps = 137/674 (20%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILD 73
           Q  L+Q + +    SE + I V+   R +      +  F +  R+ G K T  +YN ++D
Sbjct: 120 QKFLRQFREK---LSESLVIEVL---RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVD 173

Query: 74  ALLAENRFSMINPIYSNMKRDGME-----------------------------------P 98
            ++ ++   +       ++ D  E                                   P
Sbjct: 174 LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRP 233

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL- 157
           +  TYN L++A  K +R+D A  +  EM       D  +      S+CK+G+  EA  L 
Sbjct: 234 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 293

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
               F      Y  LI+GLC+    EEA   L  M      PNV+TYST++    +   +
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L  M + GC P+   F SL+  Y   G    A  L  +M++ G +P  V Y+ L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413

Query: 277 IHG-----------------------------------------LCSNGSMDEAVSVSYQ 295
           I                                           LCS G  ++A SV  +
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473

Query: 296 MEENSCPPNVTTYSA-----------------------------------LIDGFAKAGN 320
           M      P+ +TYS                                    ++D F KAG 
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A + +N M   GC+PNVV YT ++    +      A+ L E M  E C PN VT++ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 381 FIKGLCGCGRVDWAMKLLDQM-------------KQYEC---LPNITTYNELLDGLLRVN 424
            I G C  G+V+ A ++ ++M             KQY+     PN+ TY  LLDG  + +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           RV+EA +L+  +   G + N + Y+ ++ G+C+ G + EA ++  +M   G      T++
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  Y K  + + A ++L ++       P+++ YT ++ G+C  G   EA+  +Q M  
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772

Query: 545 EGICPNFATWNVLV 558
           +G  PN  T+  ++
Sbjct: 773 KGCQPNVVTYTAMI 786



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 138/297 (46%), Gaps = 9/297 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q +  +M   G   +   + S+I+ Y +V   + A K+  ++ E  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V IY  ++D L    +      +   M+  G +PNV TY  ++       +++   
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +LL  MG+KG AP+ V+Y  ++   CK G ++ A  L        + +  + Y  +I G 
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM--FVRGCNP 233
            KE    E+  LL E+      P +  Y  +I +L     +E +L +L ++  F      
Sbjct: 860 NKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
              ++ SL++   L  +   A  L++ M ++G +P + ++ +LI GL  N  + EA+
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 110/259 (42%), Gaps = 16/259 (6%)

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           SA+I  F  AG  +G                   Y  +V ++ +++        ++++  
Sbjct: 146 SAVISFFVWAGRQIGYKH------------TAPVYNALVDLIVRDDDEKVPEEFLQQIRD 193

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           ++        N  ++  C  G    A++ L ++K +   P+ +TYN L+   L+ +R+  
Sbjct: 194 DDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDS 253

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  +  E+    ++++  T     + +C+ G   EA  L+     E    D + +  +I 
Sbjct: 254 ASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLIS 310

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C+      A+  L+R+R      P++++Y++LL G  N   +      L  M+ EG  
Sbjct: 311 GLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369

Query: 549 PNFATWNVLVRSLFSNLGH 567
           P+   +N LV +  ++  H
Sbjct: 370 PSPKIFNSLVHAYCTSGDH 388


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 245/492 (49%), Gaps = 18/492 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++MK  G+      +  +++S+ + GL EQA K F  +RE G  P V  Y  ++ A L
Sbjct: 464 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 523

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + S  N ++  M  +G  PN+ TY+ L+   CK  +V+ A ++   M      PD  
Sbjct: 524 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 583

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y           Q ++  E        V  Y AL++G CK H++EEA  LL  M   G 
Sbjct: 584 MY---------FKQYDDNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 629

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I  LC VG ++ +  +  +M   G    +++++SL+  Y    R   AS 
Sbjct: 630 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 689

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+     PNVV Y+ +I GLC  G  DEA  +   MEE  C PNV TY+A+IDGF 
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
             G +    ++  RM S G +PN V Y  ++   C+N     AH+L+E+M   + P +T 
Sbjct: 750 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   I+G         ++ LLD++ Q +  P ++ Y  L+D L++  R++ A  L+ E+
Sbjct: 810 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 867

Query: 437 EKCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
                 L     TYN+++  +C A  V  AFQL  +M  +G   +  +F  +I    +  
Sbjct: 868 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 927

Query: 495 KVNNAIQLLDRI 506
           K++ A+ LLD I
Sbjct: 928 KISEALLLLDFI 939



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 259/529 (48%), Gaps = 30/529 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN------ 113
           G  P+ KI+N ++ A       S    +   M + G  P    YNIL+ ++C +      
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNF 385

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVY 168
           + +D A K   EM   G   + ++ ++    +C  G+ E+A    RE+    F    S Y
Sbjct: 386 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 445

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           + ++N LC   K+E AF L  EM   G+  +V TY+ ++ S C  G +E +     +M  
Sbjct: 446 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC PN+ ++T+L+  YL   +   A++L+  M+ EG LPN+V YS LI G C  G +++
Sbjct: 506 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 565

Query: 289 AVSVSYQM----------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           A  +  +M                ++NS  PNV TY AL+DGF K+  +  A ++ + M 
Sbjct: 566 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 625

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC PN + Y  ++  LC+     +A  +  +M+    P    T+++ I       R D
Sbjct: 626 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 685

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A K+L +M +  C PN+  Y E++DGL +V +  EA++L+  +E+ G Q N+VTY  ++
Sbjct: 686 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 745

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G    G +    +LL +M  +G   + +T+ ++I   CK G ++ A  LL+ ++    W
Sbjct: 746 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTHW 804

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                 Y  ++ G   +    E+   L ++  +   P  + + +L+ +L
Sbjct: 805 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 851



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 172/624 (27%), Positives = 287/624 (45%), Gaps = 73/624 (11%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++   + +L  M +EG   S  +F S++++Y   G    A K+  ++ + G  P   +
Sbjct: 309 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 368

Query: 68  YNHILDAL-------------LAENRFS-------MINPI-YSNMKR------------- 93
           YN ++ ++             LAE  +S       ++N I  S+  R             
Sbjct: 369 YNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 428

Query: 94  -------DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
                   G  P+  TY+ +L  LC  ++++ A+ L  EM   G   D  +YT +V S C
Sbjct: 429 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 488

Query: 147 KLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G +E+AR+    MR       V  Y ALI+   K  K+  A  L   M+  G  PN++
Sbjct: 489 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 548

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGC--------------------NPNIHSFTSL 241
           TYS +I   C  G VE +     Q+F R C                     PN+ ++ +L
Sbjct: 549 TYSALIDGHCKAGQVEKAC----QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 604

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L G+    R  EA  L + M  EG  PN + Y  LI GLC  G +DEA  V  +M E+  
Sbjct: 605 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 664

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           P  + TYS+LID + K      AS++ ++M+ N C+PNVV YT M+  LC+     +A+ 
Sbjct: 665 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 724

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L++ M  + C PN VT+   I G    G+++  ++LL++M      PN  TY  L+D   
Sbjct: 725 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 784

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +  A  L+ E+++     +   Y  ++ G  +    +E+  LL ++  + T     
Sbjct: 785 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 842

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS-YTSLLWGICNSGGMQEAFIYLQ 540
            + ++I    K  ++  A++LL+ +        D  S Y SL+  +C +  ++ AF    
Sbjct: 843 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 902

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
           +M  +G+ P   ++  L++ LF N
Sbjct: 903 EMTKKGVIPEMQSFCSLIKGLFRN 926



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 167/674 (24%), Positives = 275/674 (40%), Gaps = 137/674 (20%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILD 73
           Q  L+Q + +    SE + I V+   R +      +  F +  R+ G K T  +YN ++D
Sbjct: 79  QKFLRQFREK---LSESLVIEVL---RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVD 132

Query: 74  ALLAENRFSMINPIYSNMKRDGME-----------------------------------P 98
            ++ ++   +       ++ D  E                                   P
Sbjct: 133 LIVRDDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRP 192

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL- 157
           +  TYN L++A  K +R+D A  +  EM       D  +      S+CK+G+  EA  L 
Sbjct: 193 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 252

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
               F      Y  LI+GLC+    EEA   L  M      PNV+TYST++    +   +
Sbjct: 253 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 312

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L  M + GC P+   F SL+  Y   G    A  L  +M++ G +P  V Y+ L
Sbjct: 313 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 372

Query: 277 IHG-----------------------------------------LCSNGSMDEAVSVSYQ 295
           I                                           LCS G  ++A SV  +
Sbjct: 373 IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 432

Query: 296 MEENSCPPNVTTYSA-----------------------------------LIDGFAKAGN 320
           M      P+ +TYS                                    ++D F KAG 
Sbjct: 433 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 492

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A + +N M   GC+PNVV YT ++    +      A+ L E M  E C PN VT++ 
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 552

Query: 381 FIKGLCGCGRVDWAMKLLDQM-------------KQYEC---LPNITTYNELLDGLLRVN 424
            I G C  G+V+ A ++ ++M             KQY+     PN+ TY  LLDG  + +
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 612

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           RV+EA +L+  +   G + N + Y+ ++ G+C+ G + EA ++  +M   G      T++
Sbjct: 613 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 672

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  Y K  + + A ++L ++       P+++ YT ++ G+C  G   EA+  +Q M  
Sbjct: 673 SLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 731

Query: 545 EGICPNFATWNVLV 558
           +G  PN  T+  ++
Sbjct: 732 KGCQPNVVTYTAMI 745



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 9/309 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q +  +M   G   +   + S+I+ Y +V   + A K+  ++ E  
Sbjct: 639 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 698

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V IY  ++D L    +      +   M+  G +PNV TY  ++       +++   
Sbjct: 699 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 758

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +LL  MG+KG AP+ V+Y  ++   CK G ++ A  L        + +  + Y  +I G 
Sbjct: 759 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 818

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM--FVRGCNP 233
            KE    E+  LL E+      P +  Y  +I +L     +E +L +L ++  F      
Sbjct: 819 NKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 876

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL++   L  +   A  L++ M ++G +P + ++ +LI GL  N  + EA+ + 
Sbjct: 877 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936

Query: 294 YQMEENSCP 302
             +    CP
Sbjct: 937 DFISHMVCP 945



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/259 (20%), Positives = 110/259 (42%), Gaps = 16/259 (6%)

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           SA+I  F  AG  +G                   Y  +V ++ +++        ++++  
Sbjct: 105 SAVISFFVWAGRQIGYKH------------TAPVYNALVDLIVRDDDEKVPEEFLQQIRD 152

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           ++        N  ++  C  G    A++ L ++K +   P+ +TYN L+   L+ +R+  
Sbjct: 153 DDKEVFGQFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDS 212

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  +  E+    ++++  T     + +C+ G   EA  L+     E    D + +  +I 
Sbjct: 213 ASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLIS 269

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C+      A+  L+R+R      P++++Y++LL G  N   +      L  M+ EG  
Sbjct: 270 GLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 328

Query: 549 PNFATWNVLVRSLFSNLGH 567
           P+   +N LV +  ++  H
Sbjct: 329 PSPKIFNSLVHAYCTSGDH 347


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 262/506 (51%), Gaps = 6/506 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+  F R+      P +  +N ILD+      +S    +   ++  G++P++ T NIL
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV 165
           +   C   ++   + +L ++  +G  P  +++TT++  +C  GQV +A     +    G+
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 166 SV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y  LING+CK      A  L+ ++  R   PNV  Y+TII +LC    V  + G
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G + ++ ++T+L+ G+ +  +  EA  L N M+ +   PNV  Y+ L+  LC
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA +V   M +    P+V TYS L+DG+     L  A  ++N M   G +P+V 
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +YT ++   C+N M  +A +L ++M  +N  P  VT+++ I GLC  GR+ +   L+D+M
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +      N+ TYN L+DGL +   +  A  L  +++  GI+    T+  +L G+C+ G +
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A +    +L +G  LD   +N++I  +CKQG +  A+ +L ++   G   P+ +++  
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG-CVPNAVTFDI 519

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGI 547
           ++  +       +A   L++M+  G+
Sbjct: 520 IINALFKKDENDKAEKLLRQMICRGL 545



 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 252/479 (52%), Gaps = 5/479 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++S+ ++     A+ + +R+   G++P +   N +++      + +    + + + 
Sbjct: 62  FNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+  T+  L+K LC   +V+ A     ++  +G   D VSY T+++ +CK+G   
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181

Query: 153 EARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L  +         V +YN +I+ LCK   + EA+ L  EM  +GI  +V+TY+T+I
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C    ++ ++G+L +M ++  NPN++++  L+      G+  EA ++   M++    
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVK 301

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+V+ YSTL+ G      + +A  V   M      P+V +Y+ LI+GF K   +  A  +
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNL 361

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      P +V Y+ ++  LC++        LI++M     P N +T+N+ I GLC 
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCK 421

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G +D A+ L ++MK     P   T+  LLDGL +  R+K+A E   ++   G  L++  
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYK 481

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           YN +++G C+ G++ EA  +L KM   G   +A+TF+III A  K+ + + A +LL ++
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 208/406 (51%), Gaps = 5/406 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K +++   +   ++  +G+   +  + ++IN   ++G    A+K+  +I    
Sbjct: 135 LIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRL 194

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V++YN I+DAL      S    ++S M   G+  +V TY  L+   C  +++  A 
Sbjct: 195 TKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAI 254

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
            LL EM  K   P+  +Y  +V ++CK G+V+EA+  LA+   + V      Y+ L++G 
Sbjct: 255 GLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGY 314

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
              +++++A  +   M   G+ P+V +Y+ +I+  C    V+ +L +  +M  +   P I
Sbjct: 315 FLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGI 374

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ G    GR     DL + M   G   NV+ Y++LI GLC NG +D A+++  +
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK 434

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++    P   T++ L+DG  K G L  A + +  +++ G   +V  Y  M+   C+  +
Sbjct: 435 MKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGL 494

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             +A +++ KM    C PN VTF+  I  L      D A KLL QM
Sbjct: 495 LEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 196/384 (51%), Gaps = 2/384 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P +I ++ I+ S   + +  T++ +  ++ ++G  P++ +   L+  +   G+      +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             ++++ G+ P+ + ++TLI GLC  G +++A+    ++       +  +Y  LI+G  K
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G+  GA ++  ++      PNV  Y  ++  LC+  +  +A+ L  +M  +    + VT
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + T I G C   ++  A+ LL++M      PN+ TYN L+D L +  +VKEA  ++  + 
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K  ++ +++TY+T++ G      + +A  +   M + G   D  ++ I+I  +CK   V+
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+ L   +       P I++Y+SL+ G+C SG +   +  + +M + GI  N  T+N L
Sbjct: 357 EALNLFKEMHQKN-MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415

Query: 558 VRSLFSNLGHLGPVYILDDIMANK 581
           +  L  N GHL     L + M ++
Sbjct: 416 IDGLCKN-GHLDRAIALFNKMKDQ 438



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 1/278 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++D+AVS   +M      P +  ++ ++D FAK  +   A  + +R+   G  P+++   
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C         S++ K+      P+T+TF T IKGLC  G+V+ A+   D++   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               +  +Y  L++G+ ++   + A +LV +I+    + N+  YNTI+  +C+  +V EA
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           + L  +M  +G   D +T+  +IY +C   K+  AI LL+ +      NP++ +Y  L+ 
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMV-LKTINPNVYTYNILVD 277

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +C  G ++EA   L  ML   + P+  T++ L+   F
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 120/226 (53%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   Q++   M + GV+     +  +IN + +  + ++AL +F  + +  + P +  Y+
Sbjct: 319 ELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYS 378

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S +  +   M+  G+  NV TYN L+  LCKN  +D A  L  +M ++
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQ 438

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P + ++T ++  +CK G++++A+E     L   +   V  YN +ING CK+  +EEA
Sbjct: 439 GIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEA 498

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             +L +M + G  PN +T+  II++L      + +  +L QM  RG
Sbjct: 499 LTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 35/165 (21%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I  V  L+ +M+  G+  +   + S+I+   + G  ++A+ +F ++++ G
Sbjct: 380 LIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439

Query: 61  LKPTVKIYNHILDALLAENRFS-----------------------MIN------------ 85
           ++P    +  +LD L    R                         MIN            
Sbjct: 440 IRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEAL 499

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            + S M+ +G  PN  T++I++ AL K +  D A KLL +M  +G
Sbjct: 500 TMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 240/455 (52%), Gaps = 5/455 (1%)

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS-GVS 166
           C++     +  LL  M  KG  PD +  T ++     L  + +A    E+  +FG   V 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNALING CK ++I++A  +L  M  +   P+ +TY+ +I SLC  G ++ +L +L Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
               C P + ++T L++  +L G   EA  L + M+  G  P++  Y+T+I G+C  G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A  +   +E   C P+V +Y+ L+      G      ++  +M S  C PNVV Y+ +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC++    +A +L++ M  +   P+  +++  I   C  GR+D A++ L+ M    C
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           LP+I  YN +L  L +  +  +A E+  ++ + G   N  +YNT+   +  +G  + A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           ++ +M+  G   D IT+N +I   C++G V+ A +LL  +R   E++P +++Y  +L G 
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR-SCEFHPSVVTYNIVLLGF 518

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +  +++A   L+ M+  G  PN  T+ VL+  +
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 210/407 (51%), Gaps = 5/407 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN + ++   + A ++  R+R     P    YN ++ +L +  +  +   + + +  D
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             +P V TY IL++A      VD A KL+ EM ++G  PD  +Y TI+  +CK G V+ A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E+            V  YN L+  L  + K EE   L+ +M     DPNV+TYS +I++
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G +E ++ +L  M  +G  P+ +S+  L+  +   GR   A +    MI +G LP+
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC NG  D+A+ +  ++ E  C PN ++Y+ +      +G+ + A  +  
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+SNG  P+ + Y  M+  LC+  M  +A  L+  M      P+ VT+N  + G C   
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           R++ A+ +L+ M    C PN TTY  L++G+       EA EL  ++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 239/472 (50%), Gaps = 10/472 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL+ M  +G +    +   +I  +  +    +A+++   + +FG +P V  YN +++  
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGF 168

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              NR      +   M+     P+  TYNI++ +LC   ++D A K+L ++ +  C P  
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++YT ++ +    G V+EA +L     +      +  YN +I G+CKE  ++ AF ++  
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +  +G +P+VI+Y+ ++ +L + G  E    ++ +MF   C+PN+ +++ L+      G+
Sbjct: 289 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L   M  +G  P+  +Y  LI   C  G +D A+     M  + C P++  Y+ 
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++    K G    A +I+ ++   GCSPN  +Y  M   L  +    +A  +I +M    
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+N+ I  LC  G VD A +LL  M+  E  P++ TYN +L G  + +R+++A 
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            ++  +   G + N  TY  ++ G+  AG   EA +L   ++    ++DAI+
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV----RIDAIS 576



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 205/377 (54%), Gaps = 6/377 (1%)

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I    C  GN   SL +L  M  +G NP++   T L+KG+       +A  +   + + G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V AY+ LI+G C    +D+A  V  +M      P+  TY+ +I      G L  A 
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ N+++S+ C P V+ YT +++         +A  L+++M      P+  T+NT I+G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--EKCGIQL 443
           C  G VD A +++  ++   C P++ +YN LL  LL   + +E  +L+T++  EKC    
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC--DP 331

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+VTY+ ++  +CR G + EA  LL  M  +G   DA +++ +I A+C++G+++ AI+ L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + +   G   PDI++Y ++L  +C +G   +A     K+   G  PN +++N +  +L+S
Sbjct: 392 ETMISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450

Query: 564 NLGHLGPVYILDDIMAN 580
           +   +  ++++ ++M+N
Sbjct: 451 SGDKIRALHMILEMMSN 467



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 203/403 (50%), Gaps = 5/403 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    +L +M+ +  S     +  +I S    G  + ALK+  ++     +PTV  Y 
Sbjct: 173 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYT 232

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A + E        +   M   G++P++FTYN +++ +CK   VD A++++  +  K
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC PD +SY  ++ ++   G+ EE  +L  +  S      V  Y+ LI  LC++ KIEEA
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M ++G+ P+  +Y  +I++ C  G ++ ++  L  M   GC P+I ++ ++L  
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A +++ ++   G  PN  +Y+T+   L S+G    A+ +  +M  N   P+
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+++I    + G +  A ++   M S    P+VV Y  ++   C+ +    A +++E
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
            M    C PN  T+   I+G+   G    AM+L + + + + +
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 183/353 (51%), Gaps = 5/353 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L  + ++D    +L Q+  +    +   +  +I +    G  ++ALK+   +   G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN I+  +  E        +  N++  G EP+V +YNILL+AL    + +   
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           KL+ +M ++ C P+ V+Y+ +++++C+ G++EEA   L +    G++     Y+ LI   
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E +++ A   L  M+  G  P+++ Y+T++++LC  G  + +L I G++   GC+PN 
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ ++       G    A  +   M+  G  P+ + Y+++I  LC  G +DEA  +   
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           M      P+V TY+ ++ GF KA  +  A  +   M+ NGC PN   YT +++
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 276/565 (48%), Gaps = 5/565 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     +  +D    LL +MK         ++   I+ + +VG  + A K F+ ++  G
Sbjct: 102 LIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANG 161

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++  L   NR      I+  M+++   P  + YN ++       + D AY
Sbjct: 162 LVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAY 221

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
            LL     KGC P  V+Y  I++ + K G+ ++A     E+       +  YN +I  LC
Sbjct: 222 SLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLC 281

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K   +E AF +   M + G+ PNV T + +I  LC    ++ +  I   M  + C+P+  
Sbjct: 282 KAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGA 341

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F SL+ G    GR  +A  ++ RM+    +PNVV Y++LI         ++   +  +M
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEM 401

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
             + C P++   +  +D   KAG       ++  + + G  P+  +Y+ ++  L +    
Sbjct: 402 MRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFA 461

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            + + L   M  + C  +T  +NT I G C  G+V+ A +LL++MK     P + TY  +
Sbjct: 462 RETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSV 521

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +++R+ EA+ L  E +  GI+LN V Y++++ G  + G V EA+ ++ +M+ +G 
Sbjct: 522 VDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGL 581

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+N ++    K  ++N A+     ++   +  P+ I+Y  L+ G+C      +AF
Sbjct: 582 TPNVYTWNCLLDGLVKAEEINEALVCFQSMK-DLKCTPNQITYCILINGLCKVRKFNKAF 640

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
           ++ Q+M  +G+ PN  T+  ++  L
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGL 665



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/551 (27%), Positives = 272/551 (49%), Gaps = 9/551 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LLQ M+      +   + ++I +   VG +++ L +F +++E G +  V +   ++    
Sbjct: 48  LLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFS 107

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   MK +  + ++  YN+ +    K  +VD A+K   EM   G  PD V
Sbjct: 108 REGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDV 167

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++  +CK  +++EA E+  +      V     YN +I G     K +EA+ LL   
Sbjct: 168 TYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQ 227

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G  P+V+ Y+ I++ L   G  + +L I  +M  R   PN+ ++  ++      G  
Sbjct: 228 RAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLPTYNIIIGMLCKAGNV 286

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  + + M   G  PNV   + +I  LC    +DEA S+   M+   C P+  T+ +L
Sbjct: 287 EAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSL 346

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A +I+ RM+     PNVV YT +++   + +     H + ++M    C
Sbjct: 347 IDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGC 406

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ +  NT++  +   G  +    L +++K    LP+  +Y+ L+  L++    +E +E
Sbjct: 407 SPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYE 466

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   ++  G  L+   YNT++ G C++G V +A+QLL +M   G     +T+  ++    
Sbjct: 467 LYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLA 526

Query: 492 KQGKVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           K  +++ A  L +  +  G E N  I  Y+SL+ G    G + EA++ +++M+ +G+ PN
Sbjct: 527 KIDRLDEAYMLFEEAKSNGIELNQVI--YSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPN 584

Query: 551 FATWNVLVRSL 561
             TWN L+  L
Sbjct: 585 VYTWNCLLDGL 595



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 267/555 (48%), Gaps = 8/555 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + V+   Q  +   V C+   + ++I  Y   G  ++A  +  R R  G  P+V  YN I
Sbjct: 184 EAVEIFEQMEQNRQVPCAYA-YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCI 242

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  + +      I+  MKRD M PN+ TYNI++  LCK   V+ A+K+   M   G 
Sbjct: 243 LTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGL 301

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEAFW 186
            P+  +   ++  +CK  +++EA  +       V     + + +LI+GL K+ ++++A+ 
Sbjct: 302 FPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYR 361

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +   M+D    PNV+ Y+++I +       E    +  +M   GC+P++    + +    
Sbjct: 362 IYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVF 421

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T +   L+  +   GFLP+  +YS LIH L   G   E   + Y M++  C  +  
Sbjct: 422 KAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR 481

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            Y+ +IDGF K+G +  A Q+   M + G  P VV Y  +V  L + +   +A+ L E+ 
Sbjct: 482 AYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 541

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  N V +++ I G    GRVD A  ++++M Q    PN+ T+N LLDGL++   +
Sbjct: 542 KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEI 601

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA      ++      N +TY  +++G+C+     +AF    +M  +G K + IT+  +
Sbjct: 602 NEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAM 661

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I    K G V  A  L +R R  G   PD  SY +++ G+  +    +A+   ++   +G
Sbjct: 662 ISGLAKSGNVAQASSLFERFRASGGI-PDSASYNAMIEGLSIANRALDAYQLFEETRLKG 720

Query: 547 ICPNFATWNVLVRSL 561
              +  T   L+ +L
Sbjct: 721 CSIHTKTCVALLDAL 735



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/577 (24%), Positives = 255/577 (44%), Gaps = 80/577 (13%)

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           F  +  I   M   G  P  +T   L+ +  K+ ++  A+ LL  M +    P   +YTT
Sbjct: 7   FDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTT 66

Query: 141 IVSSICKLGQVEEARELAM-----RFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVD 193
           ++ ++ ++G  E  R LA+       G  V+V+    LI    +E +++ A  LL EM  
Sbjct: 67  LIGALSEVG--ESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKS 124

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
              D +++ Y+  I     VG V+ +     +M   G  P+  ++TS++       R  E
Sbjct: 125 NTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDE 184

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT------- 306
           A +++ +M +   +P   AY+T+I G  S G  DEA S+  +     C P+V        
Sbjct: 185 AVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILT 244

Query: 307 ---------------------------TYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
                                      TY+ +I    KAGN+  A ++ + M   G  PN
Sbjct: 245 CLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN 304

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V     M+  LC+     +A S+ E M ++ C P+  TF + I GL   GRVD A ++ +
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYE 364

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV------------- 446
           +M   + +PN+  Y  L+    + +R ++  ++  E+ + G   +++             
Sbjct: 365 RMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG 424

Query: 447 ----------------------TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
                                 +Y+ ++H + +AG   E ++L   M  +G  LD   +N
Sbjct: 425 ETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYN 484

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  +CK GKVN A QLL+ ++  G  +P +++Y S++ G+     + EA++  ++  +
Sbjct: 485 TVIDGFCKSGKVNKAYQLLEEMKTMGH-HPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 543

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            GI  N   ++ L+   F  +G +   Y++ + M  K
Sbjct: 544 NGIELNQVIYSSLIDG-FGKVGRVDEAYLVMEEMMQK 579



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 225/513 (43%), Gaps = 42/513 (8%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG+K + D    + ++MK + +  +   +  +I    + G  E A K+   ++E GL P 
Sbjct: 246 LGKKGKTDKALRIFEEMKRDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPN 304

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY---- 120
           V+  N ++D L    +      I+  M      P+  T+  L+  L K  RVD AY    
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYE 364

Query: 121 -------------------------------KLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
                                          K+  EM   GC+PD +   T +  + K G
Sbjct: 365 RMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG 424

Query: 150 QVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           + E+ R L     A  F      Y+ LI+ L K     E + L   M D+G   +   Y+
Sbjct: 425 ETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYN 484

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I   C  G V  +  +L +M   G +P + ++ S++ G     R  EA  L+      
Sbjct: 485 TVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSN 544

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   N V YS+LI G    G +DEA  V  +M +    PNV T++ L+DG  KA  +  A
Sbjct: 545 GIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEA 604

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              +  M    C+PN + Y  ++  LC+   F++A    ++M  +   PNT+T+   I G
Sbjct: 605 LVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISG 664

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G V  A  L ++ +    +P+  +YN +++GL   NR  +A++L  E    G  ++
Sbjct: 665 LAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIH 724

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             T   +L  + +A  + +A  ++G +L E  K
Sbjct: 725 TKTCVALLDALHKAECLEQA-AIVGAVLRETAK 756



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 5/215 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D    L ++ K  G+  ++ ++ S+I+ + +VG  ++A  +   + + G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +N +LD L+     +     + +MK     PN  TY IL+  LCK  + + A+
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAF 640

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
               EM  +G  P+ ++YT ++S + K G V +A  L  RF +   +     YNA+I GL
Sbjct: 641 VFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGL 700

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
              ++  +A+ L  E   +G   +  T   ++ +L
Sbjct: 701 SIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL 735


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 148/515 (28%), Positives = 278/515 (53%), Gaps = 30/515 (5%)

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           L +NR   +  +Y++M + G+ P  +T+N+L+++LC++N +D A +L  +M  KGC P+ 
Sbjct: 127 LQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNK 186

Query: 136 VSYTTIVSSICKLGQVEEARELAM-RFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMV 192
            +   +V   C+ G+ ++A E    + G  V+  VYN L++  CK+   +EA  L+  M 
Sbjct: 187 FTVGILVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMT 246

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG----CNPNIHSFTSLLKGYLLG 248
           ++G+ P+V+T+++ IS+LC  G V  +  I   M + G      PN+ +F  +LKG+   
Sbjct: 247 EKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQE 306

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L   M + G   ++ +Y+T + GL  NG + E  SV  +M EN   PN+ +Y
Sbjct: 307 GMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSY 366

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++DG  +   +L A ++ + M+SNG  P+ V YT ++   C      +A +++ +M  
Sbjct: 367 NIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIR 426

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           + C PNT T NT +  L   GR   A ++L +M +     +  T N +++GL R   +++
Sbjct: 427 KGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEK 486

Query: 429 AFELVTEIEKCGIQL----------------------NIVTYNTILHGVCRAGMVVEAFQ 466
           A E+V+E+   G                         +++TY T+++G+C+ G + EA +
Sbjct: 487 ASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKK 546

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
              +M+ +    D++T++  +  +CKQGK+++A+++L  +   G  +  + +Y SL+ G+
Sbjct: 547 KFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNG-CSKTLQTYNSLILGL 605

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            + G + E +  + +M   GI P+  T+N ++  L
Sbjct: 606 GSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCL 640



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/619 (25%), Positives = 292/619 (47%), Gaps = 67/619 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L E   +D  + L  +M  +G   ++     ++  + R G  +QAL+  +   + G
Sbjct: 157 LIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALE--FVDGKMG 214

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                 +YN ++ +   ++       +   M   G+ P+V T+N  + ALC+  +V  A 
Sbjct: 215 GNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEAS 274

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNAL 171
           ++  +M   G      P+ V++  ++   C+ G +EEAR L      G     +  YN  
Sbjct: 275 RIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTW 334

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GL +  K+ E   +L EMV+ GI+PN+ +Y+ ++  LC    +  +  ++  M   G 
Sbjct: 335 LLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGV 394

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+  ++T+LL GY   G+  EA  + N MIR+G  PN    +TL++ L   G   EA  
Sbjct: 395 YPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEE 454

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS-------------- 337
           +  +M E S   +  T + +++G  + G L  AS++ + M ++G +              
Sbjct: 455 MLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNS 514

Query: 338 --------PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
                   P+V+ YT ++  LC+     +A     +M  +N  P++VT++TF+   C  G
Sbjct: 515 IHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQG 574

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++  A+++L  M++  C   + TYN L+ GL    ++ E + L+ E+ + GI  +I TYN
Sbjct: 575 KISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYN 634

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEG-TKLDAITFNIIIYAYCKQGKVNNAIQLLD---- 504
            +++ +C  G   +A  LL +ML +G    +  +F I+I A+CK G    A +L D    
Sbjct: 635 NMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALS 694

Query: 505 --------------RIRGGGEWNP-----------DIIS----YTSLLWGICNSGGMQEA 535
                          +  GG+ +             ++S    Y  L+  +C  G + +A
Sbjct: 695 VCGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDA 754

Query: 536 FIYLQKMLNEGICPNFATW 554
              LQK++++G C + +++
Sbjct: 755 HGLLQKLIDKGYCFDHSSF 773



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 238/503 (47%), Gaps = 37/503 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  ++  + + G+ E+A  +   +++ G   +++ YN  L  LL   +      +   M
Sbjct: 295 TFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEM 354

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             +G+EPN+++YNI++  LC+N+ +  A +L+  M + G  PD V+YTT++   C  G+V
Sbjct: 355 VENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKV 414

Query: 152 EEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA+ +    +R G   + Y  N L+N L KE +  EA  +L +M ++    + +T + +
Sbjct: 415 FEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIV 474

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCN----------------------PNIHSFTSLLKG 244
           ++ LC  G +E +  ++ +M+  G N                      P++ ++T+L+ G
Sbjct: 475 VNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLING 534

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  EA   +  M+ +   P+ V Y T +   C  G +  A+ V   ME N C   
Sbjct: 535 LCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKT 594

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY++LI G    G +     + + M   G  P++  Y  M+  LC+      A SL+ 
Sbjct: 595 LQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLH 654

Query: 365 KMAFENC-PPNTVTFNTFIKGLCGCGRVDWAMKLLDQM----KQYECLPNITTYNELLDG 419
           +M  +    PN  +F   IK  C  G    A +L D         E L ++  +NELL G
Sbjct: 655 EMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLM-FNELLAG 713

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             +++  KE FE    +E+  +  N + Y  ++  +C+ G + +A  LL K++ +G   D
Sbjct: 714 G-KLSDAKELFE--ASLERSLLSKNFM-YEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFD 769

Query: 480 AITFNIIIYAYCKQGKVNNAIQL 502
             +F  +I    K+G    A +L
Sbjct: 770 HSSFIPVIDGLSKRGNKQQADEL 792



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 172/324 (53%), Gaps = 7/324 (2%)

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           +  L   R H  + L+  MI+ G  P    ++ LI  LC + ++D A  +  +M E  C 
Sbjct: 124 RSSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQ 183

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN  T   L+ GF +AG    A +  +  +  G + N V Y  +V   C+ +M  +A  L
Sbjct: 184 PNKFTVGILVRGFCRAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKL 241

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL----PNITTYNELLD 418
           +E+M  +   P+ VTFN+ I  LC  G+V  A ++   M+    L    PN+ T+N +L 
Sbjct: 242 VERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLK 301

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G  +   ++EA  LV  ++K G  +++ +YNT L G+ R G ++E   +L +M+  G + 
Sbjct: 302 GFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEP 361

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           +  ++NI++   C+   + +A +L+D +   G + PD ++YT+LL G C+ G + EA   
Sbjct: 362 NIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVY-PDTVTYTTLLHGYCSKGKVFEAKAI 420

Query: 539 LQKMLNEGICPNFATWNVLVRSLF 562
           L +M+ +G  PN  T N L+ SL+
Sbjct: 421 LNEMIRKGCHPNTYTCNTLLNSLW 444



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 136/260 (52%), Gaps = 7/260 (2%)

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           + ++  MI  G +P    +  +++ LC++N    A  L +KM+ + C PN  T    ++G
Sbjct: 136 TSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRG 195

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  GR   A++ +D         N   YN L+    + +   EA +LV  + + G+  +
Sbjct: 196 FCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPD 253

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT----KLDAITFNIIIYAYCKQGKVNNAI 500
           +VT+N+ +  +CRAG V EA ++   M ++G     K + +TFN+++  +C++G +  A 
Sbjct: 254 VVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEAR 313

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            L++ ++ GG +   + SY + L G+  +G + E    L +M+  GI PN  ++N+++  
Sbjct: 314 SLVETMKKGGNF-VSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDG 372

Query: 561 LFSNLGHLGPVYILDDIMAN 580
           L  N   L    ++D +++N
Sbjct: 373 LCRNHMMLDARRLMDLMVSN 392



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 6/161 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGV-SCSEGVFISVINSYRRVGLAEQALKMF-YRIRE 58
           MI  L E  +      LL +M  +GV S +   F  +I ++ + G  + A ++F   +  
Sbjct: 636 MINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV 695

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIY-SNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            G K    +Y+ + + LLA  + S    ++ ++++R  +  N F Y  L+  LCK+ R+D
Sbjct: 696 CGHKEA--LYSLMFNELLAGGKLSDAKELFEASLERSLLSKN-FMYEDLIDKLCKDGRLD 752

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
            A+ LL ++ +KG   D  S+  ++  + K G  ++A EL 
Sbjct: 753 DAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELG 793


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 285/572 (49%), Gaps = 26/572 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR-EF 59
           +IE      + + ++ +L +M++E    SE  F  +  +Y +  L  +A+++FYR+  EF
Sbjct: 78  LIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEF 137

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNM---KRDGMEPNVFTYNILLKALCKNNRV 116
             KPTVK +N +L+ ++           Y+++   K   + PNV ++N+++K++CK   V
Sbjct: 138 YCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLV 197

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNAL 171
           D A +L  EM  + C PDA +Y T++  +CK+ +++EA  L             + +N L
Sbjct: 198 DNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVL 257

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           INGLCK+        L+  M  +G  PN +TY+T+I  LC  G ++ +L +L +M    C
Sbjct: 258 INGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKC 317

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN  ++ +++ G +  GR  + + +   M   G++ N   YS L+ GL   G  +EA+ 
Sbjct: 318 VPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMR 377

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +  +  C  N   YSAL+DG  +      A +I + M   GC+PN   ++ ++K   
Sbjct: 378 LFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFF 437

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +    H+A  + + M   NC  N V ++  I GLC  G+V  AM +  +M    C P++ 
Sbjct: 438 EVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVV 497

Query: 412 TYNELLDGLLRVNRVKEAFELVTEI--EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
            Y+ ++ GL     V+EA +L  E+   +   Q +++TYN + + +C+   +  A  LL 
Sbjct: 498 AYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLN 557

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            ML  G   D +T NI +    ++         LD  + G ++  +++    LL    N 
Sbjct: 558 SMLDRGCDPDLVTCNIFLRMLREK---------LDPPQDGAKFLDELV--VRLLKRQRNL 606

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G  +   + LQK L+    P  +TW  +V  L
Sbjct: 607 GASKIVEVMLQKFLS----PKASTWARVVHEL 634



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 241/497 (48%), Gaps = 13/497 (2%)

Query: 82  SMINPIYSNMKRDGMEPNVFT---YNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVS 137
           S  N +   + R  +E  VF+   + ++ KA  K +  + A +L   M  +  C P   S
Sbjct: 86  SDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKS 145

Query: 138 YTTIVSSICKLGQVEEAREL--------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           + ++++ I + G  + A E          M     V  +N +I  +CK   ++ A  L  
Sbjct: 146 FNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFR 205

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  R   P+  TY T++  LC V  ++ ++ +L +M + GC P+  +F  L+ G    G
Sbjct: 206 EMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKG 265

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
                + L + M  +G +PN V Y+TLIHGLC  G +D+A+S+  +M  + C PN  TY 
Sbjct: 266 DFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYG 325

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +I+G  K G  L  +++   M   G   N   Y+ +V  L +     +A  L ++   +
Sbjct: 326 TIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDK 385

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            C  NTV ++  + GLC   + D AMK+L +M    C PN  T++ L+ G   V    +A
Sbjct: 386 GCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKA 445

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            E+  ++ K     N V Y+ ++HG+C+ G V+EA  +  KML  G + D + ++ +I  
Sbjct: 446 IEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQG 505

Query: 490 YCKQGKVNNAIQLLDRIRG-GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            C  G V  A++L + +     +  PD+I+Y  L   +C    +  A   L  ML+ G  
Sbjct: 506 LCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCD 565

Query: 549 PNFATWNVLVRSLFSNL 565
           P+  T N+ +R L   L
Sbjct: 566 PDLVTCNIFLRMLREKL 582



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 25/361 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K ++D    LL +M       +E  + ++IN   + G A    ++   + E G
Sbjct: 292 LIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERG 351

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                 +Y+ ++  L  E +      ++      G + N   Y+ L+  LC++ + D A 
Sbjct: 352 YIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAM 411

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           K+L EM +KGCAP+A ++++++    ++G   +A E+      +        Y+ LI+GL
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV--RGCNP 233
           CK+ K+ EA  +  +M+  G  P+V+ YS++I  LCD G+VE +L +  +M        P
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQP 531

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++  L            A DL N M+  G  P++V  +  +  L             
Sbjct: 532 DVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRML------------- 578

Query: 294 YQMEENSCPPN--VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
               E   PP         L+    K    LGAS+I   M+    SP    +  +V  LC
Sbjct: 579 ---REKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELC 635

Query: 352 Q 352
           Q
Sbjct: 636 Q 636


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 153/492 (31%), Positives = 245/492 (49%), Gaps = 18/492 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++MK  G+      +  +++S+ + GL EQA K F  +RE G  P V  Y  ++ A L
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + S  N ++  M  +G  PN+ TY+ L+   CK  +V+ A ++   M      PD  
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y           Q ++  E        V  Y AL++G CK H++EEA  LL  M   G 
Sbjct: 625 MY---------FKQYDDNSE-----RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I  LC VG ++ +  +  +M   G    +++++SL+  Y    R   AS 
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+     PNVV Y+ +I GLC  G  DEA  +   MEE  C PNV TY+A+IDGF 
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
             G +    ++  RM S G +PN V Y  ++   C+N     AH+L+E+M   + P +T 
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   I+G         ++ LLD++ Q +  P ++ Y  L+D L++  R++ A  L+ E+
Sbjct: 851 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908

Query: 437 EKCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
                 L     TYN+++  +C A  V  AFQL  +M  +G   +  +F  +I    +  
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968

Query: 495 KVNNAIQLLDRI 506
           K++ A+ LLD I
Sbjct: 969 KISEALLLLDFI 980



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 259/529 (48%), Gaps = 30/529 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN------ 113
           G  P+ KI+N ++ A       S    +   M + G  P    YNIL+ ++C +      
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVY 168
           + +D A K   EM   G   + ++ ++    +C  G+ E+A    RE+    F    S Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           + ++N LC   K+E AF L  EM   G+  +V TY+ ++ S C  G +E +     +M  
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC PN+ ++T+L+  YL   +   A++L+  M+ EG LPN+V YS LI G C  G +++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606

Query: 289 AVSVSYQM----------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           A  +  +M                ++NS  PNV TY AL+DGF K+  +  A ++ + M 
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC PN + Y  ++  LC+     +A  +  +M+    P    T+++ I       R D
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A K+L +M +  C PN+  Y E++DGL +V +  EA++L+  +E+ G Q N+VTY  ++
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G    G +    +LL +M  +G   + +T+ ++I   CK G ++ A  LL+ ++    W
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTHW 845

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                 Y  ++ G   +    E+   L ++  +   P  + + +L+ +L
Sbjct: 846 PTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNL 892



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 172/624 (27%), Positives = 287/624 (45%), Gaps = 73/624 (11%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++   + +L  M +EG   S  +F S++++Y   G    A K+  ++ + G  P   +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409

Query: 68  YNHILDAL-------------LAENRFS-------MINPI-YSNMKR------------- 93
           YN ++ ++             LAE  +S       ++N I  S+  R             
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 94  -------DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
                   G  P+  TY+ +L  LC  ++++ A+ L  EM   G   D  +YT +V S C
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529

Query: 147 KLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G +E+AR+    MR       V  Y ALI+   K  K+  A  L   M+  G  PN++
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGC--------------------NPNIHSFTSL 241
           TYS +I   C  G VE +     Q+F R C                     PN+ ++ +L
Sbjct: 590 TYSALIDGHCKAGQVEKAC----QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L G+    R  EA  L + M  EG  PN + Y  LI GLC  G +DEA  V  +M E+  
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           P  + TYS+LID + K      AS++ ++M+ N C+PNVV YT M+  LC+     +A+ 
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L++ M  + C PN VT+   I G    G+++  ++LL++M      PN  TY  L+D   
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +  A  L+ E+++     +   Y  ++ G  +    +E+  LL ++  + T     
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLS 883

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS-YTSLLWGICNSGGMQEAFIYLQ 540
            + ++I    K  ++  A++LL+ +        D  S Y SL+  +C +  ++ AF    
Sbjct: 884 VYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFS 943

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
           +M  +G+ P   ++  L++ LF N
Sbjct: 944 EMTKKGVIPEMQSFCSLIKGLFRN 967



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 167/674 (24%), Positives = 275/674 (40%), Gaps = 137/674 (20%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILD 73
           Q  L+Q + +    SE + I V+   R +      +  F +  R+ G K T  +YN ++D
Sbjct: 120 QKFLRQFREK---LSESLVIEVL---RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVD 173

Query: 74  ALLAENRFSMINPIYSNMKRDGME-----------------------------------P 98
            ++ ++   +       ++ D  E                                   P
Sbjct: 174 LIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRP 233

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL- 157
           +  TYN L++A  K +R+D A  +  EM       D  +      S+CK+G+  EA  L 
Sbjct: 234 SRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLV 293

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
               F      Y  LI+GLC+    EEA   L  M      PNV+TYST++    +   +
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L  M + GC P+   F SL+  Y   G    A  L  +M++ G +P  V Y+ L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413

Query: 277 IHG-----------------------------------------LCSNGSMDEAVSVSYQ 295
           I                                           LCS G  ++A SV  +
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473

Query: 296 MEENSCPPNVTTYSA-----------------------------------LIDGFAKAGN 320
           M      P+ +TYS                                    ++D F KAG 
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A + +N M   GC+PNVV YT ++    +      A+ L E M  E C PN VT++ 
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593

Query: 381 FIKGLCGCGRVDWAMKLLDQM-------------KQYEC---LPNITTYNELLDGLLRVN 424
            I G C  G+V+ A ++ ++M             KQY+     PN+ TY  LLDG  + +
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           RV+EA +L+  +   G + N + Y+ ++ G+C+ G + EA ++  +M   G      T++
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  Y K  + + A ++L ++       P+++ YT ++ G+C  G   EA+  +Q M  
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772

Query: 545 EGICPNFATWNVLV 558
           +G  PN  T+  ++
Sbjct: 773 KGCQPNVVTYTAMI 786



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 142/309 (45%), Gaps = 9/309 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q +  +M   G   +   + S+I+ Y +V   + A K+  ++ E  
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V IY  ++D L    +      +   M+  G +PNV TY  ++       +++   
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +LL  MG+KG AP+ V+Y  ++   CK G ++ A  L        + +  + Y  +I G 
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM--FVRGCNP 233
            KE    E+  LL E+      P +  Y  +I +L     +E +L +L ++  F      
Sbjct: 860 NKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL++   L  +   A  L++ M ++G +P + ++ +LI GL  N  + EA+ + 
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977

Query: 294 YQMEENSCP 302
             +    CP
Sbjct: 978 DFISHMVCP 986



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 4/190 (2%)

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            N  ++  C  G    A++ L ++K +   P+ +TYN L+   L+ +R+  A  +  E+ 
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              ++++  T     + +C+ G   EA  L+     E    D + +  +I   C+     
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFE 319

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+  L+R+R      P++++Y++LL G  N   +      L  M+ EG  P+   +N L
Sbjct: 320 EAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378

Query: 558 VRSLFSNLGH 567
           V +  ++  H
Sbjct: 379 VHAYCTSGDH 388


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 247/472 (52%), Gaps = 9/472 (1%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           NI+LK LC+N  V  A  L+ EMG K  +PD VSY T+++ +CK  +++EA  L +   +
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 164 GVSVYNA-----LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                N+     L++GLCK+ +++EA  LL  M  +G D +V+ Y T+IS  C+ GN++ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
              +  +M  +G + N+ +++ L+ G    G+  EA+ + N M   G  P+VV Y+ LI 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC +G    A+ +   M E    P+  TY+ L+ G  K G ++ A +I   MI  G   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENC-PPNTVTFNTFIKGLCGCGRVDWAMK 396
           +VV Y  ++K LC      +A  L   M   ENC  PN  TFN  I GLC  GR+  A+K
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +  +M +     N+ TYN LL G L+  ++KEA EL  ++   G   N  TY+ ++ G C
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +  M+  A  L  +M   G       +N ++ + CK+G +  A  L   + G     PDI
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEM-GNANCEPDI 420

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           IS+ +++ G   +G  Q       KM+  G+ P+  T++ L+  L S LG L
Sbjct: 421 ISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL-SKLGEL 471



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/501 (30%), Positives = 251/501 (50%), Gaps = 11/501 (2%)

Query: 56  IREFGLK---PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           IRE G K   P +  YN +++ L    +      +   M+  G  PN  T   L+  LCK
Sbjct: 21  IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 80

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----V 167
           + R+D A +LL  M  KG   D V Y T++S  C  G ++  +EL     G G+S     
Sbjct: 81  DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 140

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y+ L++GLC+  + +EA  +L  M + GI P+V+TY+ +I  LC  G    ++ +L  M 
Sbjct: 141 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 200

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +G  P+  ++  LL G    G   +A  +   MI +G   +VV Y+TL+ GLC  G +D
Sbjct: 201 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 260

Query: 288 EAVSVSYQM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           EA+ +   M   EN   PNV T++ LI G  K G L  A +I  +M+  G   N+V Y  
Sbjct: 261 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 320

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++    +     +A  L +++      PN+ T++  I G C    ++ A  L  +M+ + 
Sbjct: 321 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 380

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P +  YN L+  L +   +++A  L  E+     + +I+++NT++ G  +AG      
Sbjct: 381 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 440

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +L  KM+  G + DA+TF+ +I    K G+++ A   L+R+   G + PD + Y SLL G
Sbjct: 441 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG-FTPDALVYDSLLKG 499

Query: 526 ICNSGGMQEAFIYLQKMLNEG 546
           + + G   E    L +M  +G
Sbjct: 500 LSSKGDTTEIINLLHQMAAKG 520



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 262/521 (50%), Gaps = 10/521 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+++M  + VS     + ++IN   +    ++A+ +   +   G  P       ++D L 
Sbjct: 20  LIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLC 79

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R      +   MK+ G + +V  Y  L+   C N  +D   +L  EM  KG + + V
Sbjct: 80  KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 139

Query: 137 SYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ +V  +C+LGQ +EA  +  AM        V  Y  LI+GLCK+ +   A  LL  M
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V++G +P+ +TY+ ++S LC  G V  +  IL  M  +G   ++ ++ +L+KG    G+ 
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259

Query: 252 HEASDLWNRMI-REGFL-PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            EA  L+N M   E  L PNV  ++ LI GLC  G + +AV +  +M +     N+ TY+
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+ G  KAG +  A ++W +++  G  PN   Y+ ++   C+  M + A  L  +M   
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P    +NT +  LC  G ++ A  L  +M    C P+I ++N ++DG L+    +  
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL  ++ + G++ + +T++T+++ + + G + EA   L +M+  G   DA+ ++ ++  
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499

Query: 490 YCKQGKVNNAIQLLDRIRGGGE-WNPDIISYTSLLWGICNS 529
              +G     I LL ++   G   +  I+S  ++L  +C+S
Sbjct: 500 LSSKGDTTEIINLLHQMAAKGTVLDRKIVS--TILTCLCHS 538



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 246/494 (49%), Gaps = 7/494 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  G   +     ++++   + G  ++A+++   +++ G    V +Y  ++    
Sbjct: 55  LLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC 114

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     ++  M   G+  NV TY+ L+  LC+  +   A  +L  M   G  PD V
Sbjct: 115 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 174

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +CK G+   A +L    +  G   S   YN L++GLCKE  + +AF +L  M
Sbjct: 175 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV-RGC-NPNIHSFTSLLKGYLLGG 249
           +++G   +V+TY+T++  LCD G V+ +L +   MF    C  PN+ +F  L+ G    G
Sbjct: 235 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A  +  +M+++G   N+V Y+ L+ G    G + EA+ +  Q+ +    PN  TYS
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LIDGF K   L  A  ++  M ++G +P +  Y  ++  LC+     QA SL ++M   
Sbjct: 355 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 414

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           NC P+ ++FNT I G    G   +  +L  +M +    P+  T++ L++ L ++  + EA
Sbjct: 415 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
              +  +   G   + + Y+++L G+   G   E   LL +M  +GT LD    + I+  
Sbjct: 475 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 534

Query: 490 YCKQGKVNNAIQLL 503
            C   +  + ++LL
Sbjct: 535 LCHSIQEVDVMELL 548



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 228/475 (48%), Gaps = 7/475 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D    LL+ MK +G      ++ ++I+ +   G  ++  ++F  +   G
Sbjct: 74  LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  Y+ ++  L    ++   N + + M   G+ P+V TY  L+  LCK+ R   A 
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGL 175
            LL  M  KG  P  V+Y  ++S +CK G V +A + L M    G    V  YN L+ GL
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253

Query: 176 CKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C + K++EA  L   M D    ++PNV T++ +I  LC  G +  ++ I  +M  +G   
Sbjct: 254 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 313

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N+ ++  LL G L  G+  EA +LW +++  GF+PN   YS LI G C    ++ A  + 
Sbjct: 314 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 373

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M  +   P +  Y+ L+    K G+L  A  ++  M +  C P+++++  M+    + 
Sbjct: 374 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 433

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
             F     L  KM      P+ +TF+T I  L   G +D A   L++M      P+   Y
Sbjct: 434 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 493

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           + LL GL       E   L+ ++   G  L+    +TIL  +C +   V+  +LL
Sbjct: 494 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 54/134 (40%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++I+   + G  +   ++  ++ E GL+P    ++ +++ L               M 
Sbjct: 423 FNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 482

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G  P+   Y+ LLK L           LL +M  KG   D    +TI++ +C   Q  
Sbjct: 483 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEV 542

Query: 153 EARELAMRFGSGVS 166
           +  EL   F  G S
Sbjct: 543 DVMELLPTFFQGTS 556


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 238/446 (53%), Gaps = 6/446 (1%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           +  MK  G+ P+V   N +L    K+NR + A+ L  EM         V++  +++ +CK
Sbjct: 144 FDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCK 203

Query: 148 LGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
            G++++A+E      A+     V  YN +I+G C   ++E A  +   M  RG+ P+  T
Sbjct: 204 EGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYT 263

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y + IS +C  G +E + G+L +M   G  P   ++ +L+ GY   G    A D  ++M+
Sbjct: 264 YGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMV 323

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           REG +P V  Y+ LIH L  +  MDEA  +  +M E    P+  TY+ LI+G+ + GN+ 
Sbjct: 324 REGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVK 383

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  + + MIS G  P  V YT ++ VL +     QA  L EK+  +   P+ + FN  I
Sbjct: 384 KAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALI 443

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            G C  G +D A  +L +M Q + +P+  T+N L+ G  R  +V+ A EL+ E++  GI+
Sbjct: 444 DGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIK 503

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            + ++YNT++ G  + G + +AF++  +ML  G     +T+N +I   CK  + ++A QL
Sbjct: 504 PDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQL 563

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICN 528
           L  +   G   P+  +Y SL+ GI N
Sbjct: 564 LKEMISKG-ITPNDNTYLSLIEGIGN 588



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 237/464 (51%), Gaps = 6/464 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----REL 157
           Y++L++A C+  R D A++    M  KG  P   +   ++S   K  + E+A        
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            MR  S V  +N +IN LCKE K+++A   +  M   GI PNV+TY+TII   C  G VE
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +  I   M  RG  P+ +++ S + G    G+  EAS +  +M   G  P  V Y+TLI
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            G C+ G+++ A     +M      P V+TY+ LI        +  A  I   M   G  
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ V Y  ++   C+     +A +L ++M  +   P  VT+ + I  L   GR+  A  L
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            +++ +    P++  +N L+DG      +  AF ++ E+++  +  + VT+NT++ G CR
Sbjct: 424 FEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCR 483

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G V  A +L+ +M   G K D I++N +I  Y K+G + +A ++ D +   G +NP ++
Sbjct: 484 EGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG-FNPTLL 542

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Y +L+ G+C +     A   L++M+++GI PN  T+  L+  +
Sbjct: 543 TYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 226/434 (52%), Gaps = 6/434 (1%)

Query: 136 VSYTTIVSSICKLGQVEEARE-LAMRFGSGVSVY----NALINGLCKEHKIEEAFWLLCE 190
           V Y  ++ + C+L + ++A E   M  G GV  +    N +++   K ++ E+A+ L  E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M    I  +V+T++ +I+ LC  G ++ +   +G M   G  PN+ ++ +++ GY   GR
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A  +++ M   G  P+   Y + I G+C  G ++EA  +  +M+E    P   TY+ 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LIDG+   GNL  A    ++M+  G  P V  Y  ++  L  +    +A  +I++M+ + 
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P++VT+N  I G C CG V  A  L D+M      P   TY  L+  L +  R+K+A 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  +I + GI  +++ +N ++ G C  G +  AF +L +M       D +TFN ++   
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGR 481

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C++GKV  A +L++ ++  G   PD ISY +L+ G    G M++AF    +ML+ G  P 
Sbjct: 482 CREGKVEAARELIEEMKSRG-IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPT 540

Query: 551 FATWNVLVRSLFSN 564
             T+N L++ L  N
Sbjct: 541 LLTYNALIQGLCKN 554



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 204/415 (49%), Gaps = 40/415 (9%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
            E+A  ++  +    +K +V  +N +++ L  E +          M+  G++PNV TYN 
Sbjct: 172 TEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNT 231

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELA 158
           ++   C   RV+GA  +   M  +G  PD+ +Y + +S +CK G++EEA       +E+ 
Sbjct: 232 IIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIG 291

Query: 159 MR---------------------------------FGSGVSVYNALINGLCKEHKIEEAF 185
           +R                                     VS YN LI+ L  + K++EA 
Sbjct: 292 LRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEAD 351

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            ++ EM ++G+ P+ +TY+ +I+  C  GNV+ +  +  +M  +G  P   ++TSL+   
Sbjct: 352 GIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVL 411

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  +A DL+ +++R+G  P+++ ++ LI G C+NG+MD A ++  +M++    P+ 
Sbjct: 412 SKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDE 471

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ L+ G  + G +  A ++   M S G  P+ ++Y  ++    +      A  + ++
Sbjct: 472 VTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDE 531

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           M      P  +T+N  I+GLC     D A +LL +M      PN  TY  L++G+
Sbjct: 532 MLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 186/376 (49%), Gaps = 30/376 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++G + +   MK  GV      + S I+   + G  E+A  M  +++E GL+PT   YN
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D    +    M       M R+G+ P V TYN+L+ AL  + ++D A  ++ EM  K
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  PD+V+Y  +++  C+ G V                              ++AF L  
Sbjct: 361 GLVPDSVTYNILINGYCRCGNV------------------------------KKAFTLHD 390

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM+ +GI P  +TY+++I  L   G ++ +  +  ++  +G  P++  F +L+ G+   G
Sbjct: 391 EMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANG 450

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
               A  +   M +   +P+ V ++TL+ G C  G ++ A  +  +M+     P+  +Y+
Sbjct: 451 NMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYN 510

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI G++K G++  A ++ + M+S G +P ++ Y  +++ LC+N     A  L+++M  +
Sbjct: 511 TLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISK 570

Query: 370 NCPPNTVTFNTFIKGL 385
              PN  T+ + I+G+
Sbjct: 571 GITPNDNTYLSLIEGI 586



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 128/249 (51%), Gaps = 5/249 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L   C++D    ++++M  +G+      +  +IN Y R G  ++A  +   +   G
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PT   Y  ++  L    R    + ++  + R G+ P++  +N L+   C N  +D A+
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAF 456

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
            +L EM      PD V++ T++   C+ G+VE AREL     S G+      YN LI+G 
Sbjct: 457 AMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   +++AF +  EM+  G +P ++TY+ +I  LC     + +  +L +M  +G  PN 
Sbjct: 517 SKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576

Query: 236 HSFTSLLKG 244
           +++ SL++G
Sbjct: 577 NTYLSLIEG 585



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 8/206 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+  +   + S+I    + G  +QA  +F +I   G+ P + ++N ++D   
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHC 447

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           A         +   M +  + P+  T+N L++  C+  +V+ A +L+ EM ++G  PD +
Sbjct: 448 ANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHI 507

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T++S   K G +++A       L++ F   +  YNALI GLCK  + + A  LL EM
Sbjct: 508 SYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEM 567

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVE 217
           + +GI PN  TY ++I     +GNVE
Sbjct: 568 ISKGITPNDNTYLSLIEG---IGNVE 590


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 233/444 (52%), Gaps = 8/444 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFGS 163
           L+K LC + R   A ++L   G     PD + Y  +V+  C  GQ++ AR L   M    
Sbjct: 110 LIKKLCASGRTADARRVLAASG-----PDVMVYNAMVAGYCGAGQLDAARRLVADMPVEP 164

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               YN LI GLC   +   A  +L +M  RG  P+V+TY+ ++ + C     + ++ +L
Sbjct: 165 DAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLL 224

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M  +GC P+I ++  +L G    GR  +A +    +   G  PN V+Y+ ++ GL + 
Sbjct: 225 DEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTA 284

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
              ++A  +  +M    CPPNV T++ LI    + G +  A ++  +M   GC+PN ++Y
Sbjct: 285 ERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSY 344

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++   C+    H+A   +E M    C P+ V++NT +  LC  G VD A++LL Q+K 
Sbjct: 345 NPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKD 404

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
             C P + +YN ++DGL +  + KEA EL+ E+   G+Q +I+TY+TI  G+CR   + E
Sbjct: 405 KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEE 464

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A +   K+   G +  A  +N I+   CK+ + +NAI L   +   G   P+  +YT L+
Sbjct: 465 AVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSG-CMPNESTYTILV 523

Query: 524 WGICNSGGMQEAFIYLQKMLNEGI 547
            G+   G ++EA     ++ + G+
Sbjct: 524 EGLAYEGLVKEARELFAQLCSRGV 547



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 217/415 (52%), Gaps = 8/415 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ +++  Y   G  + A ++   + +  ++P    YN ++  L    R S    +  +M
Sbjct: 136 VYNAMVAGYCGAGQLDAARRL---VADMPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDM 192

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G  P+V TY ILL+A CK +    A KLL EM +KGCAPD V+Y  +++ IC+ G+V
Sbjct: 193 FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRV 252

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E+A E      S         YN ++ GL    + E+A  L+ EM  +G  PNV+T++ +
Sbjct: 253 EDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNML 312

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           IS LC  G VE ++ +L QM   GC PN  S+  LL  +    + H+A +    M+  G 
Sbjct: 313 ISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGC 372

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++V+Y+TL+  LC NG +D A+ + +Q+++  C P + +Y+ +IDG  KAG    A +
Sbjct: 373 YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALE 432

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + + M S G  P+++ Y+ +   LC+ +   +A     K+      P    +N  + GLC
Sbjct: 433 LLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLC 492

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
                  A+ L   M    C+PN +TY  L++GL     VKEA EL  ++   G+
Sbjct: 493 KRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 220/460 (47%), Gaps = 33/460 (7%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V +YN ++       +      + ++M    +EP+ +TYN L++ LC   R   A  +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIE 182
           L +M  +GC PD V+YT                               L+   CK    +
Sbjct: 189 LEDMFRRGCLPDVVTYTI------------------------------LLEATCKRSGYK 218

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A  LL EM D+G  P+++TY+ +++ +C  G VE ++  L  +   GC PN  S+  +L
Sbjct: 219 QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVL 278

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           KG     R  +A  L   M  +G  PNVV ++ LI  LC  G ++ A+ V  QM +  C 
Sbjct: 279 KGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCT 338

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN  +Y+ L+  F K   +  A +    M+S GC P++V+Y  ++  LC+N     A  L
Sbjct: 339 PNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIEL 398

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + ++  + C P  +++NT I GL   G+   A++LLD+M      P+I TY+ +  GL R
Sbjct: 399 LHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR 458

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            +R++EA     +++  GI+     YN IL G+C+      A  L   M+  G   +  T
Sbjct: 459 EDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNEST 518

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           + I++     +G V  A +L  ++   G  N  ++   S+
Sbjct: 519 YTILVEGLAYEGLVKEARELFAQLCSRGVVNKKLMKKGSI 558



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 224/434 (51%), Gaps = 16/434 (3%)

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFG-------SGVSVYNALINGLCKEHKIEEAFWL 187
           + S T  +  + + G++++A  L            + V    ALI  LC   +  +A  +
Sbjct: 67  SASATERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRV 126

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L         P+V+ Y+ +++  C  G ++ +  ++  M V    P+ +++ +L++G   
Sbjct: 127 LA-----ASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPV---EPDAYTYNTLIRGLCG 178

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            GRT  A  +   M R G LP+VV Y+ L+   C      +A+ +  +M +  C P++ T
Sbjct: 179 RGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVT 238

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ +++G  + G +  A +    + S GC PN V+Y  ++K L     +  A  L+E+MA
Sbjct: 239 YNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            + CPPN VTFN  I  LC  G V+ AM++L+QM QY C PN  +YN LL    +  ++ 
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIH 358

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A E V  +   G   +IV+YNT+L  +CR G V  A +LL ++  +G     I++N +I
Sbjct: 359 KAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
               K GK   A++LLD +   G   PDII+Y+++  G+C    ++EA     K+ + GI
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKG-LQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGI 477

Query: 548 CPNFATWNVLVRSL 561
            P  A +N ++  L
Sbjct: 478 RPTAALYNAILLGL 491



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 172/350 (49%), Gaps = 30/350 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M  +G +     +  V+N   + G  E A++    +  +G +P    YN +L  L 
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+     +   M   G  PNV T+N+L+  LC+   V+ A ++L +M   GC P+++
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           SY  +                              ++  CK+ KI +A   +  MV RG 
Sbjct: 343 SYNPL------------------------------LHAFCKQKKIHKAMEFVELMVSRGC 372

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P++++Y+T++++LC  G V+ ++ +L Q+  +GC+P + S+ +++ G    G+T EA +
Sbjct: 373 YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALE 432

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L + M  +G  P+++ YST+  GLC    ++EAV    ++++    P    Y+A++ G  
Sbjct: 433 LLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLC 492

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           K      A  ++  MIS+GC PN   YT +V+ L    +  +A  L  ++
Sbjct: 493 KRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 5/261 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  + L+++M  +G   +   F  +I+   R GL E A+++  ++ ++G  P    YN +
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L A   + +          M   G  P++ +YN LL ALC+N  VD A +LL ++ +KGC
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFW 186
           +P  +SY T++  + K G+ +EA EL     S      +  Y+ + +GLC+E +IEEA  
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVR 467

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
             C++ D GI P    Y+ I+  LC       ++ +   M   GC PN  ++T L++G  
Sbjct: 468 TFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLA 527

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             G   EA +L+ ++   G +
Sbjct: 528 YEGLVKEARELFAQLCSRGVV 548



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 111/220 (50%), Gaps = 13/220 (5%)

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN---TFIKGLCGCGRVDWAMKLLDQMKQ 403
           ++VL +      A  L++ +A  N PP+          IK LC  GR   A ++L     
Sbjct: 74  LRVLVRRGELDDALRLVDSLAGLN-PPSPAAVGPCAALIKKLCASGRTADARRVLAASG- 131

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P++  YN ++ G     ++  A  LV ++    ++ +  TYNT++ G+C  G    
Sbjct: 132 ----PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSN 184

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A  +L  M   G   D +T+ I++ A CK+     A++LLD +   G   PDI++Y  +L
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG-CAPDIVTYNVVL 243

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            GIC  G +++A  +L+ + + G  PN  ++N++++ LF+
Sbjct: 244 NGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFT 283



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 72/148 (48%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL Q+K +G S     + +VI+   + G  ++AL++   +   GL+P +  Y+
Sbjct: 391 EVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYS 450

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I   L  E+R       +  ++  G+ P    YN +L  LCK      A  L   M + 
Sbjct: 451 TIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISS 510

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL 157
           GC P+  +YT +V  +   G V+EAREL
Sbjct: 511 GCMPNESTYTILVEGLAYEGLVKEAREL 538



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 9/128 (7%)

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++  +C +G   +A ++L       +  D + +N ++  YC  G+++ A +L+  +   
Sbjct: 109 ALIKKLCASGRTADARRVLA-----ASGPDVMVYNAMVAGYCGAGQLDAARRLVADM--- 160

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
               PD  +Y +L+ G+C  G    A   L+ M   G  P+  T+ +L+ +     G+  
Sbjct: 161 -PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQ 219

Query: 570 PVYILDDI 577
            + +LD++
Sbjct: 220 AMKLLDEM 227


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 277/569 (48%), Gaps = 29/569 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI    ++  +D    +  +M+  G+  +  V+ ++IN   ++G  E+  K+   + + G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++D    E        +   M R+G+     TYN LLK  C  + +D A 
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           +L   M  +G AP+ +S +T++  + K G+ E+A       LA      V  +N +INGL
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++ EA  LL  M +    P+ +TY T+    C +G + T+  ++ +M   G  P++
Sbjct: 510 CKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSV 569

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S + G+ +  + H+ +D+ + M   G  PN+V Y  LI G C  G++ EA ++ ++
Sbjct: 570 EMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFE 629

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N   PNV   SAL+  F K G +  A+ +  ++++    P      C +  +  + +
Sbjct: 630 MVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPG-----CSISTIEIDKI 684

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H    +++ +A  N     V +N  I GLC  GR+  A  L + ++    LP+  TY+ 
Sbjct: 685 SH----VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSS 740

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G      + EAF L   +   G+  NI+TYN++++G+C++G +  A  L  K+  +G
Sbjct: 741 LIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG 800

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG---------------EWNPDIISYT 520
              + IT+N +I  YCK+GK   A +L  ++   G                 +P+ I+Y 
Sbjct: 801 ISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYC 860

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           +L+ G   SG M+E      +M   G+ P
Sbjct: 861 TLIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 164/607 (27%), Positives = 285/607 (46%), Gaps = 70/607 (11%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           QM++ GV   E     +  +Y R G   QA++    +   GL+  +  Y+ ++D      
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSY 138
                  I  +++R G+ PNV TY +L+K  CK+ R++ A +++ EM   G    D V+Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 139 TTIVSSICKLGQVEEAREL--AMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMV 192
             +++  C+ G++++A  +   MR  +G+ V    YN +INGLCK  ++EE   +L EM 
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMR-DAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 193 DRGIDPN-----------------------------------VITYSTIISSLCDVGNVE 217
           D G+ P+                                    +TY+T++   C +  ++
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +   M  RG  PN  S ++LL G    G+T +A +LW   +  G   NV+ ++T+I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +GLC  G M EA  +  +M+E  CPP+  TY  L DG+ K G L  A+ + N+M   G +
Sbjct: 507 NGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFA 566

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+V  +   +        +H+ + +  +M+     PN VT+   I G C  G +  A  L
Sbjct: 567 PSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNL 626

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEA---------FELVT-------EIEKCGI 441
             +M      PN+   + L+    +  +V EA          +++        EI+K   
Sbjct: 627 YFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 442 QLNI----------VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
            ++           V +N I+ G+C++G + +A  L   +  +    D  T++ +I+   
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             G ++ A  L D +   G   P+II+Y SL++G+C SG +  A     K+ ++GI PN 
Sbjct: 747 ASGSIDEAFSLRDVMLSAG-LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNG 805

Query: 552 ATWNVLV 558
            T+N L+
Sbjct: 806 ITYNTLI 812



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/613 (24%), Positives = 292/613 (47%), Gaps = 69/613 (11%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ ++   G    AL +F  + + G +P+++  N +L+ L+      M   +Y  M+
Sbjct: 151 FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210

Query: 93  RDGMEPNVFTYNILLKALCKNNRV-----------------------------------D 117
             G+ P+ FT  I+ KA C++ RV                                   +
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFGSGVSV----YNAL 171
            A ++L  +  KG +P+ V+YT +V   CK G++EEA  +   M+    + V    Y  +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ING C+  ++++A  +  EM D GI  N+  Y+T+I+ LC +G +E    +L +M   G 
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+ +S+ +L+ GY   G   +A ++   M+R G     + Y+TL+ G CS  ++D+A+ 
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           + + M +    PN  + S L+DG  KAG    A  +W   ++ G + NV+ +  ++  LC
Sbjct: 451 LWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLC 510

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  L+++M    CPP+++T+ T   G C  G++  A  L+++M+     P++ 
Sbjct: 511 KIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVE 570

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            +N  + G     +  +  ++ +E+   G+  N+VTY  ++ G C+ G + EA  L  +M
Sbjct: 571 MFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEM 630

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNA--------------------------IQLLDR 505
           +  G   +    + ++  + K+GKV+ A                            ++D 
Sbjct: 631 VNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDT 690

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           I  G   + +++ +  +++G+C SG + +A    + + N+   P+  T++ L+    ++ 
Sbjct: 691 IADGNPHSANVM-WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS- 748

Query: 566 GHLGPVYILDDIM 578
           G +   + L D+M
Sbjct: 749 GSIDEAFSLRDVM 761



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/569 (24%), Positives = 257/569 (45%), Gaps = 63/569 (11%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           + RRV L   A    +R+     +P++  +  +L  L    RF     + S++     EP
Sbjct: 76  ALRRVRLDPDAALHLFRLAPS--RPSLVSHAQLLHILARARRFHDARALLSSLPPHA-EP 132

Query: 99  --------------NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                         +  ++++LL+A     ++  A  +   MG  GC P   S   +++ 
Sbjct: 133 LFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192

Query: 145 ICKLGQVEEARELAMRFG----SGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           + + G    A   AM +G    +GV         +    C++ ++ +A   + EM   G+
Sbjct: 193 LVQSGDPGMA---AMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGL 249

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           + N++ Y  ++   C +G  E +  IL  +  +G +PN+ ++T L+KGY   GR  EA  
Sbjct: 250 EVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAER 309

Query: 257 LWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +   M   G  + + VAY  +I+G C  G MD+A  V  +M +     N+  Y+ +I+G 
Sbjct: 310 VVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGL 369

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G +    ++   M   G  P+  +Y  ++   C+     +A  +   M        T
Sbjct: 370 CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATT 429

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           +T+NT +KG C    +D A++L   M +    PN  + + LLDGL +  + ++A  L  E
Sbjct: 430 LTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE 489

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
               G+  N++T+NT+++G+C+ G + EA +LL +M       D++T+  +   YCK G+
Sbjct: 490 TLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQ 549

Query: 496 VNNAIQLLDRIRGGG-------------------EWN---------------PDIISYTS 521
           +  A  L++++   G                   +W+               P++++Y +
Sbjct: 550 LGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGA 609

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           L+ G C  G + EA     +M+N G+ PN
Sbjct: 610 LIAGWCKEGNLHEACNLYFEMVNNGMNPN 638



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 211/432 (48%), Gaps = 23/432 (5%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           P  VS+  ++  + +  +  +AR              AL++ L      E  F  L E V
Sbjct: 98  PSLVSHAQLLHILARARRFHDAR--------------ALLSSLPPH--AEPLFPHLAE-V 140

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            R    + +++  ++ +  D G + ++L +   M   GC P++ S   LL   +  G   
Sbjct: 141 YRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPG 200

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A+ ++ +M   G LP+    + +    C +G + +AV    +ME      N+  Y A++
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NC 371
           D +   G    A +I   +   G SPNVV YT +VK  C++    +A  ++++M    + 
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + V +   I G C  GR+D A ++ ++M+      N+  YN +++GL ++ R++E  +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           ++ E+E  G++ +  +YNT++ G CR G + +AF++   M+  G     +T+N ++  +C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 492 KQGKVNNAIQL--LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
               +++A++L  L   RG     P+ IS ++LL G+  +G  ++A    ++ L  G+  
Sbjct: 441 SLHAIDDALRLWFLMLKRGVA---PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAK 497

Query: 550 NFATWNVLVRSL 561
           N  T+N ++  L
Sbjct: 498 NVITFNTVINGL 509



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 163/345 (47%), Gaps = 15/345 (4%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRM-------------IREGFLPNVVAYSTLIHG 279
           P++ S   LL       R H+A  L + +             +   F  + V++  L+  
Sbjct: 98  PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRA 157

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G +  A++V   M +  C P++ + + L++   ++G+   A+ ++ +M   G  P+
Sbjct: 158 HADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPD 217

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
                 M K  C++    QA   +E+M       N V ++  +   CG G  + A ++L+
Sbjct: 218 EFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILE 277

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRA 458
            +++    PN+ TY  L+ G  +  R++EA  +V E+++ G I ++ V Y  +++G C+ 
Sbjct: 278 SLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQR 337

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + +A ++  +M   G  ++   +N +I   CK G++    ++L  +   G   PD  S
Sbjct: 338 GRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG-MRPDKYS 396

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           Y +L+ G C  G M++AF   + M+  G+     T+N L++   S
Sbjct: 397 YNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 269/549 (48%), Gaps = 33/549 (6%)

Query: 60  GLKPTVKIYNHILDALL-------AEN-RFSMINP------------IYSNMKRDG---M 96
           G K  V  Y+ +L+ L+       AE  R SMI              ++  M  DG    
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKF 155

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +P +  YN +L +L K   +D    + +E+ N   +P+  ++  +V+  CK+G V EA  
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215

Query: 157 LAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
            A +            Y +LI G C+   ++ A+ +   M  +G   N ++Y+ +I  LC
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           + G +  +L +   M    C P + ++T L+      GR  EA +L+N M  +G  PNV 
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ LI GLC    MDEA  +  +M E    P+V TY+ALIDG+ K G +  A +I + M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            SN C PN   Y  ++  LC+    H+A +L+ KM      P+ +T+N+ I G C    +
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A +LL  M +   +P+  TY+  +D L +  RV+EA  L   ++  G++ N V Y  +
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G C+ G +  A+ LL +ML +    ++ T+N++I   CK+ K+  A  L+ ++   G 
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG- 574

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
             P +++YT L+  +   G    A      M++ G  P+  T+   + + FS     G +
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQ----GML 630

Query: 572 YILDDIMAN 580
             +DD++A 
Sbjct: 631 EEVDDVIAK 639



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 277/575 (48%), Gaps = 24/575 (4%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +   M  +G   +E  + ++I+     G   +ALK+F  + E    PTV+ Y  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ AL    R      +++ MK  G EPNV TY +L+  LCK N++D A K+L EM  KG
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
             P  V+Y  ++   CK G +++A E+     +   G     YN LI GLCK+ K+ +A 
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL +M++R + P++ITY+++I   C V ++E++  +L  M   G  P+  +++  +   
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  EA  L++ +  +G   N V Y+ LI G C  G +D A S+  +M  ++C PN 
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNS 544

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LI+G  K   +  AS +  +M++ G  P VV YT ++  + ++  F  A  +   
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+  T+  F+      G ++    ++ +M +   LP++ TY  L+DG  R+  
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE------------------AFQL 467
              AF+ +  +   G + ++   + ++  +     + E                  A +L
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKL 724

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             KM+  G  +D   +  +I  +C+Q ++  A  L+  ++  G  +P    Y SLL   C
Sbjct: 725 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG-MSPSEDIYNSLLDCCC 783

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             G   EA   +  M+  G+ P   ++ +LV  L+
Sbjct: 784 KLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLY 818



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 253/469 (53%), Gaps = 8/469 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G + NV +Y+ +L  L +   +  A K+ + M    C+ + V +  ++    K+    
Sbjct: 94  RPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF--VLEVFRKMNADG 151

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           E      +F   +  YN ++  L K   I+E   +  E+++  I PN+ T++ +++  C 
Sbjct: 152 E-----FKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +GNV  +     ++   G +P+  ++TSL+ G+        A +++  M ++G   N V+
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LIHGLC  G ++EA+ +   M E++C P V TY+ LI   + +G  + A  ++N M 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC PNV  YT ++  LC+ N   +A  ++ +M+ +   P+ VT+N  I G C  G +D
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A ++LD M+   C PN  TYNEL+ GL +  +V +A  L+ ++ +  +  +++TYN+++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           HG C+   +  A++LL  M   G   D  T+++ I   CK+G+V  A  L D ++  G  
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             ++I YT+L+ G C  G +  A+  L++MLN+   PN  T+NVL+  L
Sbjct: 507 ANEVI-YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 162/585 (27%), Positives = 269/585 (45%), Gaps = 79/585 (13%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIR---EFGLKPTVKIYNHILDAL---------- 75
           +E + IS+I S   +      L++F ++    EF  KPT++ YN IL +L          
Sbjct: 120 AEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMK 179

Query: 76  -----LAENRFS--------MIN-----------PIY-SNMKRDGMEPNVFTYNILLKAL 110
                L  N+ S        M+N            +Y S + + G+ P+ FTY  L+   
Sbjct: 180 TVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH 239

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF--------- 161
           C+N  VD AY++ + M  KGC  + VSYT ++  +C+ G++ EA +L             
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299

Query: 162 -----------GSG--------------------VSVYNALINGLCKEHKIEEAFWLLCE 190
                      GSG                    V  Y  LI+GLCKE+K++EA  +L E
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G+ P+V+TY+ +I   C  G ++ +  IL  M    C PN  ++  L+ G     +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            H+A  L N+M+     P+++ Y++LIHG C    ++ A  +   M EN   P+  TYS 
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
            ID   K G +  A  +++ + + G   N V YT ++   C+      A+SL+E+M  + 
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C PN+ T+N  I+GLC   ++  A  L+ +M      P + TY  L+  +L+      A 
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G Q ++ TY   LH     GM+ E   ++ KM  EG   D +T+ ++I  Y
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + G  + A   L  +   G   P +   + L+  + +   M+E 
Sbjct: 660 ARLGLTHRAFDFLKCMVDTG-CKPSLYIVSILIKNLSHENRMKET 703



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 259/549 (47%), Gaps = 24/549 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++D  + +L +M  +G+  S   + ++I+ Y + G+ + A ++   +    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + YN ++  L  + +      + + M    + P++ TYN L+   CK N ++ AY
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +LL  M   G  PD  +Y+  + ++CK G+VEEA  L     A    +   +Y ALI+G 
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  KI+ A+ LL  M++    PN  TY+ +I  LC    ++ +  ++ +M   G  P +
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T L+   L  G    A  ++N M+  G+ P+V  Y+  +H   S G ++E   V  +
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P++ TY+ LIDG+A+ G    A      M+  GC P++   + ++K L   N 
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR 699

Query: 356 FHQAHS------------------LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
             +  S                  L EKM    C  +   +   I G C   R++ A  L
Sbjct: 700 MKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGL 759

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           +  MK+    P+   YN LLD   ++    EA  LV  + + G+   + +Y  ++ G+  
Sbjct: 760 VHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYI 819

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G   +A  +   +L  G   D + + ++I    K+  V+   +L+D +   G   P+ +
Sbjct: 820 EGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKG-CQPNPL 878

Query: 518 SYTSLLWGI 526
           +Y+ L+ G+
Sbjct: 879 TYSLLIEGL 887



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 59/356 (16%)

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP------------------- 302
           +R GF  NV +YS++++ L     +  A  +   M ++ C                    
Sbjct: 93  LRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGE 152

Query: 303 ----PNVTTYSALI-----------------------------------DGFAKAGNLLG 323
               P +  Y+ ++                                   +G+ K GN++ 
Sbjct: 153 FKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVE 212

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A    ++++  G  P+   YT ++   C+N     A+ +   M  + C  N V++   I 
Sbjct: 213 AELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIH 272

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  GR++ A+KL   M +  C P + TY  L+  L    R  EA  L  E+++ G + 
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+ TY  ++ G+C+   + EA ++L +M  +G     +T+N +I  YCK+G +++A ++L
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           D +       P+  +Y  L+ G+C    + +A   L KML   + P+  T+N L+ 
Sbjct: 393 DLMESNS-CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIH 447



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 159/341 (46%), Gaps = 23/341 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE L ++ ++     L+ +M   GV  +   +  +I    + G  + ALK+F  +   G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  Y   L A  ++     ++ + + M  +G+ P++ TY +L+    +      A+
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR--------------ELAMRFGS--- 163
             L  M + GC P     + ++ ++    +++E R              E+A++      
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMV 729

Query: 164 ------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                  VS+Y ALI G C++ ++EEA  L+  M +RG+ P+   Y++++   C +G   
Sbjct: 730 EHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYA 789

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ ++  M   G  P + S+  L+ G  + G   +A  +++ ++  G+  + VA+  LI
Sbjct: 790 EAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLI 849

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            GL     +DE   +   MEE  C PN  TYS LI+G  + 
Sbjct: 850 DGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 274/524 (52%), Gaps = 8/524 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           +R +G +  A+ +FY +   G  P++K  N +L +L+  N F     ++  M  +G  P+
Sbjct: 185 FRNLGFS-CAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS-EGACPD 242

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
           VF++  ++ ALCK  +++ A +L ++M   G +P+ V+Y  I++ +C+ G+++ A EL  
Sbjct: 243 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 302

Query: 160 RFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +         +  Y ALINGL K +  ++   +L EM+  G +PNV+ ++ +I   C +G
Sbjct: 303 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMG 362

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           N+E +L I   M  +   P   +  SL++G+    +   A +    ++  G   +     
Sbjct: 363 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 422

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +++H LC       A   +  M   +  P+    + L+ G  K G  L A+++W R++  
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 482

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G   + V    ++  LC      +A  ++++M     P + +T+N  I G C  G+V+  
Sbjct: 483 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 542

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            +L ++M +    P+I TYN LL GL  V ++ +A +L  E +  G+  NI TY  ++ G
Sbjct: 543 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 602

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+A  + +   L  ++L +  +L++I +NIII A+C+ G V  A+QLL+ ++  G   P
Sbjct: 603 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL-P 661

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +  +Y+SL+ G+CN G +++A   + +M  EG  PN   +  L+
Sbjct: 662 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 705



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 265/548 (48%), Gaps = 6/548 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+  G+S +   +  +IN   + G  + A ++  ++   G++P +K Y  +++ L+
Sbjct: 265 LFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLI 324

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N F  +N +   M   G  PNV  +N L+   CK   ++GA K+   M +K   P +V
Sbjct: 325 KLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 384

Query: 137 SYTTIVSSICKLGQVEEARE-LAMRFGSGVSVYN----ALINGLCKEHKIEEAFWLLCEM 191
           +  +++   CK  Q+E A   L     SG+S++     ++++ LCK+ +   AF     M
Sbjct: 385 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMM 444

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R   P+ +  + ++  LC  G    +  +  ++  +G   +  +  +L+ G    G+ 
Sbjct: 445 LSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKL 504

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EAS +   M+  G   + + Y+ LI G C+ G ++    +  +M +    P++ TY+ L
Sbjct: 505 PEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFL 564

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G    G L  A ++W+   ++G   N+  Y  M++  C+ N      +L  ++  +  
Sbjct: 565 LRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKM 624

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             N++ +N  IK  C  G V  A++LL+ MK    LPN  TY+ L+ G+  +  V++A  
Sbjct: 625 ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKH 684

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ E+ K G   N+V Y  ++ G C+ G +  A     +M+      +  T+ ++I  YC
Sbjct: 685 LIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYC 744

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G +  A  LL +++  G   PD+++Y  L  G C +  M  AF    +M  EG+  + 
Sbjct: 745 KLGNMEKANNLLIKMKESG-IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDE 803

Query: 552 ATWNVLVR 559
            T+  LV 
Sbjct: 804 ITYTTLVH 811



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 255/541 (47%), Gaps = 43/541 (7%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           EG       F +VIN+  + G  E A+++F ++ + G+ P V  YN I++ L    R   
Sbjct: 237 EGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDN 296

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
              +   M   G++PN+ TY  L+  L K N  D    +L EM   G  P+ V +  ++ 
Sbjct: 297 AFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLID 356

Query: 144 SICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
             CK+G +E A ++     S       V++Y +L+ G CK  +IE A   L E++  G+ 
Sbjct: 357 GYCKMGNIEGALKIKDVMISKNITPTSVTLY-SLMQGFCKSDQIEHAENALEEILSSGLS 415

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            +     +++  LC      ++      M  R   P+    T L+ G    G+  EA++L
Sbjct: 416 IHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL 475

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           W R++ +G   + V  + LIHGLC  G + EA  +  +M E   P +  TY+ALI GF  
Sbjct: 476 WFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCN 535

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G + G  ++   M   G  P++                                    T
Sbjct: 536 EGKVEGCFRLREEMTKRGIQPDI-----------------------------------YT 560

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  ++GLC  G++D A+KL D+ K    + NI TY  +++G  + NR+++   L  E+ 
Sbjct: 561 YNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELL 620

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              ++LN + YN I+   C+ G V  A QLL  M  +G   +  T++ +I+  C  G V 
Sbjct: 621 SKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVE 680

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A  L+D +R  G + P+++ YT+L+ G C  G M  A     +M++  I PN  T+ V+
Sbjct: 681 DAKHLIDEMRKEG-FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVM 739

Query: 558 V 558
           +
Sbjct: 740 I 740



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 236/485 (48%), Gaps = 5/485 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D V ++L +M   G + +  VF ++I+ Y ++G  E ALK+   +    + PT      
Sbjct: 329 FDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS 388

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++      ++          +   G+  +      ++  LCK  R   A++    M ++ 
Sbjct: 389 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 448

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVS--VYNALINGLCKEHKIEEAF 185
             P  +  T +V  +CK G+  EA EL  R    GS  S    NALI+GLC   K+ EA 
Sbjct: 449 FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 508

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            ++ EM++RG+  + ITY+ +I   C+ G VE    +  +M  RG  P+I+++  LL+G 
Sbjct: 509 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 568

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+  +A  LW+     G + N+  Y  ++ G C    +++  ++  ++       N 
Sbjct: 569 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 628

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             Y+ +I    + GN+  A Q+   M S G  PN   Y+ ++  +C   +   A  LI++
Sbjct: 629 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 688

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  E   PN V +   I G C  G++D A     +M  +   PN  TY  ++DG  ++  
Sbjct: 689 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 748

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +++A  L+ ++++ GI  ++VTYN + +G C+A  +  AF++  +M  EG  +D IT+  
Sbjct: 749 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 808

Query: 486 IIYAY 490
           +++ +
Sbjct: 809 LVHGW 813



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
            V+ F LL +   +GT     T N ++ +  K  +     ++   +  G    PD+ S+T
Sbjct: 193 AVDVFYLLAR---KGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGA--CPDVFSFT 247

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +++  +C  G M+ A     KM   GI PN  T+N ++  L  N G L   + L + M  
Sbjct: 248 NVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQN-GRLDNAFELKEKMTV 306

Query: 581 K 581
           K
Sbjct: 307 K 307


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 253/512 (49%), Gaps = 8/512 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L +     G + +L+ M    +      F  V+ SY R G    A++    +++ G
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAG 199

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + I N  +  L+  NR          M+   + PNV TYN L+K  C  +R++ A 
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAX 259

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           +L+ EM  KGC+PD +SY T++  +CK  +++E R L  +     ++      YN  ++ 
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHM 319

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K    +EA   L E  +R    + + YS I+ S C  G ++ +  I+ +MF +GC P+
Sbjct: 320 LSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPD 379

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++TS++ G     +  +A  +  +M + G  PN V+Y+ L++GLC NG+  EA  +  
Sbjct: 380 VVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMN 439

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
             EE    PN  TYS L+ GF + G    A  +   MI  G  P  V    +++ LCQ  
Sbjct: 440 MSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A   +E+     C  N V F T I G C    ++ A+ LLD M      P++ TY 
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++D L +  R++EA +L  ++ + G     VTY T++H  CR G V +  +LL KML  
Sbjct: 560 TIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
                A  +N +I   C  G +  A +LL ++
Sbjct: 620 QECRTA--YNQVIEKLCSFGNLEQAYKLLGKV 649



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 235/462 (50%), Gaps = 7/462 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRF 161
           Y  +L+ L K     GA ++L  M  +       ++  ++ S  + G++  A R L M  
Sbjct: 137 YYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQ 196

Query: 162 GSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +G+    S+ N  I+ L   +++++A   L  M    I PNVITY+ +I   CD+  +E
Sbjct: 197 KAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLE 256

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVAYSTL 276
            +  ++ +M  +GC+P+  S+ +++       R  E   L  +M+++   LP+ V Y+T 
Sbjct: 257 DAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTF 316

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +H L  +G  DEA+    + EE     +   YSA++  F + G +  A +I N M S GC
Sbjct: 317 VHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGC 376

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV YT ++  LCQ     QA  ++ +M    C PNTV++   + GLC  G    A +
Sbjct: 377 IPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEARE 436

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +++  ++   +PN  TY+ L+ G  R  +  EA +LV E+ K G     V  N ++  +C
Sbjct: 437 MMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLC 496

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +   V EA + + + L  G  ++ + F  +I+ +C++  +  A+ LLD +    + +PD+
Sbjct: 497 QEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNK-HPDV 555

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++YT+++  +   G ++EA     KML  G  P   T+  ++
Sbjct: 556 VTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVI 597



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 177/366 (48%), Gaps = 4/366 (1%)

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           DP  I Y  ++  L      + +  +L  M  R       +F  ++  Y   G+   A  
Sbjct: 133 DP--IVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR 190

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
               M + G  P++   +T IH L     +D+AV    +M+     PNV TY+ LI G+ 
Sbjct: 191 XLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYC 250

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNT 375
               L  A ++   M   GCSP+ ++Y  ++  LC+     +   L+EKM  + N  P+ 
Sbjct: 251 DLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQ 310

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+NTF+  L   G  D A++ L + ++     +   Y+ ++    R  R+ +A E+V E
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G   ++VTY ++++G+C+   V +A ++L +M   G K + +++  ++   CK G 
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
              A ++++ +     W P+ I+Y+ L+ G    G   EA   +++M+ +G  P     N
Sbjct: 431 SLEAREMMN-MSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 489

Query: 556 VLVRSL 561
           +L++SL
Sbjct: 490 LLIQSL 495



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 199/464 (42%), Gaps = 47/464 (10%)

Query: 144 SICKLGQVEEARELAMRFGSGVS----------VYNALINGLCKEHKIEEAFWLLCEMVD 193
            +C + Q++    +A+RF               VY A++  L K    + A  +L  M  
Sbjct: 103 QVCAVLQLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAK 162

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I+     +  ++ S    G +  ++  L  M   G  P++    + +   ++G R  +
Sbjct: 163 RRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDK 222

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA--- 310
           A     RM      PNV+ Y+ LI G C    +++A  +  +M    C P+  +Y     
Sbjct: 223 AVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMG 282

Query: 311 -------------LIDGFAKAGNLLGASQIWNRMI--------------------SNGCS 337
                        L++   K  NLL     +N  +                         
Sbjct: 283 FLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFR 342

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            + V Y+ +V   C+     +A  ++ +M  + C P+ VT+ + I GLC   +VD A K+
Sbjct: 343 VDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKM 402

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L QM ++ C PN  +Y  LL+GL +     EA E++   E+     N +TY+ ++HG  R
Sbjct: 403 LRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRR 462

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G   EA  L+ +M+ +G     +  N++I + C++ KV+ A + +++    G    +++
Sbjct: 463 EGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG-CAVNVV 521

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++T+++ G C    ++ A   L  M      P+  T+  ++ +L
Sbjct: 522 NFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDAL 565



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/406 (22%), Positives = 170/406 (41%), Gaps = 78/406 (19%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F+ +++ +   G  ++AL+      E   +     Y+ I+ +   E R      I + M
Sbjct: 315 TFVHMLSKH---GHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEM 371

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G  P+V TY  ++  LC+  +VD A K+L +M   GC P+ VSYT +++ +CK G  
Sbjct: 372 FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 431

Query: 152 EEAREL---------------------AMR--------------------FGSGVSVYNA 170
            EARE+                       R                    F + V + N 
Sbjct: 432 LEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEI-NL 490

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI  LC+E K++EA   + + ++ G   NV+ ++T+I   C   ++E +L +L  M++  
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI------------- 277
            +P++ ++T+++      GR  EA+ L  +M+R G++P  V Y T+I             
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLL 610

Query: 278 --------------------HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
                                 LCS G++++A  +  ++   +   +  T   LI+ +  
Sbjct: 611 KLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLS 670

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            G  L +  +  RM +    P++     + K L       +A  LI
Sbjct: 671 KGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLI 716



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 7/191 (3%)

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           E   S+++ +Y + K     P+V TY  ++ AL K  R++ A KL ++M   G  P  V+
Sbjct: 537 EAALSLLDDMYLSNK----HPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVT 592

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGV---SVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           Y T++   C++G+VE+  +L  +  S     + YN +I  LC    +E+A+ LL +++  
Sbjct: 593 YRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 652

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
               +  T   +I S    G    S  +  +MF R   P++     + K  +L G++ EA
Sbjct: 653 ASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEA 712

Query: 255 SDLWNRMIREG 265
             L  R +  G
Sbjct: 713 DKLILRFVERG 723


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 275/561 (49%), Gaps = 48/561 (8%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYR-------RVGLAEQALKMFYRIREFGLKP 63
           +D +++LL  ++      ++  F   + SY        R  + ++  +++  +    + P
Sbjct: 153 VDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVP 212

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            +   N +++A          N   S + + G+ P+ FTY  L+   C+NN V+ AYK+ 
Sbjct: 213 NIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVF 272

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR------------------FGS 163
             M NKGC  + VSYTTI+  +C+ G+++E   L   MR                  FG+
Sbjct: 273 NMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGN 332

Query: 164 --------------------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
                                V  Y  +++ +CKE K++E+  +L EM+++G+ P+V+TY
Sbjct: 333 DRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + +I   C+ G +E +L ILG M    C PN  ++  L+ G+      H+A  L ++M+ 
Sbjct: 393 NALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLE 452

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
               P++V Y++LIH  C  G  D A  +   ++EN   P+  TYS  ID   K+  +  
Sbjct: 453 SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEE 512

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  ++N +   G   N V YT ++   C+     +A SL+E+M  E+C PN+ T+N+ I 
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G+C  G+V   + +++ M +    P + TY  L++ +LR      A  +  ++   G + 
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++ TY   +H  C +G V EA  ++ +M+  G   D++T+ ++I AY + G   +A  +L
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692

Query: 504 DRIRGGGEWNPDIISYTSLLW 524
            R+   G  +P    + +L+W
Sbjct: 693 KRMLDAG-CDPSHPIWNNLIW 712



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 250/467 (53%), Gaps = 9/467 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +  V +++ LLK L  NN      K+ + M     + D + +  ++  + ++ + +
Sbjct: 113 KPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRF--LLDFLRQMNRDD 170

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                 ++F   V  YN L+  L +   I+E   +  EM++  I PN+ T +T++++   
Sbjct: 171 ND----IKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSK 226

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +GN+  +   + ++F  G +P+  ++TSL+ GY      + A  ++N M  +G   N V+
Sbjct: 227 MGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVS 286

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG-FAKAGNLLGASQIWNRM 331
           Y+T+IHGLC  G +DE +S+  +M E+ C P V TY+ +I   F    NL G   ++N M
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGM-DLFNEM 345

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
               C PNV  YT MV  +C+     ++  ++ +M  +   P+ VT+N  I+G C  GR+
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A+++L  M+   C PN  TYNEL+ G  +   V +A  L++++ +  +  ++VTYN++
Sbjct: 406 EAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSL 465

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +H  C+AG    A++LL  +   G   D  T+++ I   CK  ++  A  L + ++  G 
Sbjct: 466 IHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKG- 524

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              + + YT+L+ G C +G + EA   L++M +E   PN +T+N L+
Sbjct: 525 IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLI 571



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 218/448 (48%), Gaps = 5/448 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    +   M  +G   +E  + ++I+     G  ++ + +F ++RE    PTV+ Y 
Sbjct: 264 DVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYT 323

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+ AL   +R      +++ M+    EPNV TY +++ A+CK  ++D + ++L EM  K
Sbjct: 324 VIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEK 383

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  P  V+Y  ++   C+ G++E A E+     S         YN LI G  K   + +A
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL +M++  + P+++TY+++I   C  G+ +++  +L  +   G  P+  +++  +  
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                R  EA DL+N +  +G   N V Y+ LI G C  G +DEA+S+  +M    C PN
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            +TY++LI G  K G +     +   M   G  P V  YT +++ + +   F  A+ +  
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFN 623

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+  T+  FI   C  G V  A  ++ +M +   +P+  TY  L+    R+ 
Sbjct: 624 QMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLG 683

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTIL 452
              +AF ++  +   G   +   +N ++
Sbjct: 684 LAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 170/344 (49%), Gaps = 5/344 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ + ++ ++D  + +L +M  +G+  S   + ++I  Y   G  E AL++   +    
Sbjct: 360 MVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN 419

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P  + YN ++              + S M    + P++ TYN L+   CK    D AY
Sbjct: 420 CRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAY 479

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
           KLL  +   G  PD  +Y+  + ++CK  ++EEA +L       G+     +Y ALI+G 
Sbjct: 480 KLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGH 539

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  KI+EA  LL  M      PN  TY+++I  +C  G V+  L ++  M   G  P +
Sbjct: 540 CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTV 599

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T L++  L  G    A+ ++N+M+  G  P+V  Y+  IH  C++G++ EA  +  +
Sbjct: 600 ATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMAR 659

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           M E    P+  TY+ LI  + + G    A  +  RM+  GC P+
Sbjct: 660 MIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPS 703



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 28/250 (11%)

Query: 324 ASQIWNRM--ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
           A Q +N +  I  G    V +++ ++K+L  NN+F     + EK+               
Sbjct: 102 ALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLF----GVGEKIR-------------- 143

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPN-------ITTYNELLDGLLRVNRVKEAFELVT 434
           I  +  C  VD    LLD ++Q     N       + +YNELL  L R   + E   + T
Sbjct: 144 ISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYT 203

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+    I  NI T NT+++   + G +VEA   + K+   G   D+ T+  +I  YC+  
Sbjct: 204 EMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNN 263

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            VN+A ++ + +   G    + +SYT+++ G+C +G + E     +KM  +   P   T+
Sbjct: 264 DVNSAYKVFNMMPNKG-CRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTY 322

Query: 555 NVLVRSLFSN 564
            V++ +LF N
Sbjct: 323 TVIIHALFGN 332


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 166/556 (29%), Positives = 283/556 (50%), Gaps = 18/556 (3%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M   G   S   + ++I+   + G  + A  +  ++ + G  P V  Y  ++D L    R
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                     M R G EP++ TYN L+  LC  NR+D A  +L E+   G AP+ ++Y+T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 141 IVSSICKLGQVEEA----RELAMRFGS--GVSVYNALINGLCKEHKIEEAFWLLC----E 190
           +V   C+  ++++A    RE+ +R GS   + VY   I G C E + + + +  C    E
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILR-GSVCNLVVYIDCIFGFC-EARCQSSRY-ECRDGDE 177

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M++ G  P+V+TY+T IS LC  G ++  L +L +M   G  P++ +F S++ G     R
Sbjct: 178 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR 237

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME--ENSCPPNVTTY 308
             +A  ++  M+  G +P+ + YS ++  L     +D    V   M+  +  C   V T+
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH 297

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +A I    ++G    A  I   MI +G  PN+++Y  ++  LC++     A  L  KM  
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357

Query: 369 EN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLLRVNRV 426
              C P+ + FNT I G C  GR+  A +LL +MK    C+P++ TYN L+DG  +   +
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           K+A  L+ E++  G + N+VTY  +++G  + GM  EA  L  +M  +G   D IT+N +
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTV 477

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEW-NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           + A+ K G ++ A  +  +++    + +PD I+Y  L+ G C +   ++    LQ+M   
Sbjct: 478 LSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTAR 537

Query: 546 GICPNFATWNVLVRSL 561
           G   +  T+NVL+  L
Sbjct: 538 GWSCDSYTYNVLIAKL 553



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/583 (28%), Positives = 286/583 (49%), Gaps = 18/583 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q LLQ+M   G + +   + ++I+   +      A++   R+   G
Sbjct: 16  LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 75

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +  YN ++  L   NR      +   + R+G  PN  TY+ L+   C+  R+D A 
Sbjct: 76  CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQAR 135

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKL---GQVEEARELAMRFGSG----VSVYNALIN 173
            L+ EM  +G   + V Y   +   C+        E R+      SG    V  YN  I+
Sbjct: 136 GLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFIS 195

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  K+++   +L EM   GI P+V+T+ +IIS LC    ++ +  +   M  RGC P
Sbjct: 196 GLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 255

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRM--IREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +  +++ +L       R     ++   M  ++ G +  V  ++  I  LC +G    A +
Sbjct: 256 DSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKN 315

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVL 350
           +   M E+   PN+ +Y+ +IDG  K+GN+  A ++  +M+ +G C P+V+ +  ++   
Sbjct: 316 ILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGF 375

Query: 351 CQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           C+     QAH L+ +M  +N C P+ VT+NT I G    G +  A  LL +M+   C PN
Sbjct: 376 CKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPN 435

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA---FQ 466
           + TY  L++G  +    +EA  L  E+   G   +I+TYNT+L    +AGM+ +A   +Q
Sbjct: 436 VVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQ 495

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
            L K        DAIT+ I+I  YC+       + LL  +   G W+ D  +Y  L+  +
Sbjct: 496 QL-KNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARG-WSCDSYTYNVLIAKL 553

Query: 527 CNSGGM-QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
             +  +  +A    Q+ML++   P+ + +N LVR LF   G +
Sbjct: 554 AETEEVPSKALAVYQQMLDQDCVPSASIFNSLVR-LFLRTGDV 595



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 214/412 (51%), Gaps = 7/412 (1%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           + + V  Y  LI+GLCK   ++ A  LL +M D G  PNV+TY+ +I  LC       ++
Sbjct: 6   YDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAI 65

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
             + +M   GC P++ ++ SL+ G  +  R  +A  +   ++R GF PN + YSTL+   
Sbjct: 66  QTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWN 125

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF--AKAGNLLGASQIWNRMISNGCSP 338
           C    +D+A  +  +M       N+  Y   I GF  A+  +     +  + MI +G  P
Sbjct: 126 CRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIP 185

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +VV Y   +  LC+     +   ++E+M     PP+ VTF + I GLC   R+D A ++ 
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE--KCGIQLNIVTYNTILHGVC 456
             M +  C+P+  TY+ +LD L R NR+    E++  ++  K G  + + T+N  +  +C
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALC 305

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           R+G    A  +L  M+  G+  + +++N +I   CK G V++A +L  ++   G   PD+
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLV--RSLFSNL 565
           I + +L+ G C +G + +A   L +M  + IC P+  T+N L+  +S F +L
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 161/584 (27%), Positives = 286/584 (48%), Gaps = 7/584 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    ++ +I G   + ++M    +  +   + ++I+   ++G  E+A  +F  +   G
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP ++ YN +++             +   +K++ +  N +    ++  LC    +  A 
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRAN 462

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGL 175
           +L  EM + G  P+ V YTTIV  + K G+ EEA + L +    G+S     YN +I G 
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+EE    L EM+ +G+ PNV TY   I   C  G ++ +     +M   G  PN 
Sbjct: 523 CKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPND 582

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
              T L+ GY   G T +A   +  M+ +G LP+V  +S LIHGL  NG + EA+ V  +
Sbjct: 583 VICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSE 642

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + +    P+V TY++LI    K G+L  A ++ + M   G +PN+V Y  ++  LC+   
Sbjct: 643 LLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE 702

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L + +  +    N+VT++T I G C    +  A +L   MK     P+   Y  
Sbjct: 703 IAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCA 762

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+DG  +    ++A  L   + + GI  +   +N ++ G  + G ++EA+QL+  M+   
Sbjct: 763 LIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNH 821

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + +T+ I+I  +C  G +  A QL   ++      P++++YTSLL G    G   E 
Sbjct: 822 ITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVM-PNVLTYTSLLHGYNRIGRRSEM 880

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           F    +M+  GI P+   W+V+V +       +  + ++DD+++
Sbjct: 881 FSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLS 924



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 283/572 (49%), Gaps = 9/572 (1%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           +++L  M+ +G   +   +  VI    R G  ++AL++   +   GL P   IY  ++D 
Sbjct: 252 KHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDG 311

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
              + R +    +   M   G++P+   Y  L+    K + + GA+++  EM  +    +
Sbjct: 312 FCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLN 371

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
             +Y  ++  +CK+G +E+A +L      M     +  YN LI G  K   +E+A+ LL 
Sbjct: 372 TFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLI 431

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           E+    +  N      I++ LC  G++  +  +  +M   G  PNI  +T+++KG +  G
Sbjct: 432 EIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEG 491

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  EA  +   M  +G  P+V  Y+T+I G C  G M+E  S   +M      PNV TY 
Sbjct: 492 RFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYG 551

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           A I G+ +AG +  A + +  M+ +G +PN V  T ++   C++    +A +    M  +
Sbjct: 552 AFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ 611

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+  T +  I GL   G++  AM +  ++     +P++ TY  L+  L +   +K A
Sbjct: 612 GVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAA 671

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           FEL  ++ K GI  NIVTYN +++G+C+ G + +A +L   +  +G   +++T++ II  
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAG 731

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           YCK   +  A QL   ++  G   PD   Y +L+ G C +G  ++A      M+ EGI  
Sbjct: 732 YCKSANLTEAFQLFHGMKLVG-VPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAS 790

Query: 550 NFATWNVLVRSLFSNLGHLGPVY-ILDDIMAN 580
             A +N L+   F  LG L   Y +++D++ N
Sbjct: 791 TPA-FNALIDGFFK-LGKLIEAYQLVEDMVDN 820



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 265/556 (47%), Gaps = 9/556 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L + M  +G+     ++ ++I+ + R   + +   M   +   GLKP    Y 
Sbjct: 282 DVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYT 341

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++  + ++       +   M    ++ N FTY  L+  LCK   ++ A  L  EM   
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LINGLCKEHKIEEA 184
           G  PD  +Y  ++    K+  +E+A EL +         NA     ++NGLC    +  A
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  EM+  G+ PN++ Y+TI+  L   G  E ++ ILG M  +G +P++  + +++ G
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIG 521

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G+  E       MI +G  PNV  Y   IHG C  G M  A     +M ++   PN
Sbjct: 522 FCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPN 581

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
               + LIDG+ K GN   A   +  M+  G  P+V  ++ ++  L +N    +A  +  
Sbjct: 582 DVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFS 641

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           ++  +   P+  T+ + I  LC  G +  A +L D M +    PNI TYN L++GL ++ 
Sbjct: 642 ELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLG 701

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            + +A EL   I + G+  N VTY+TI+ G C++  + EAFQL   M + G   D+  + 
Sbjct: 702 EIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYC 761

Query: 485 IIIYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            +I   CK G    A+ L L  +  G    P   ++ +L+ G    G + EA+  ++ M+
Sbjct: 762 ALIDGCCKAGNTEKALSLFLGMVEEGIASTP---AFNALIDGFFKLGKLIEAYQLVEDMV 818

Query: 544 NEGICPNFATWNVLVR 559
           +  I PN  T+ +L+ 
Sbjct: 819 DNHITPNHVTYTILIE 834



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 276/567 (48%), Gaps = 42/567 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL ++K E ++ +  +  +++N     G   +A ++F  +  +GLKP + IY  I+  L+
Sbjct: 429 LLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLV 488

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E RF     I   MK  G+ P+VF YN ++   CK  +++     LVEM  KG  P+  
Sbjct: 489 KEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVY 548

Query: 137 SYTTIVSSICKLGQVEEA-RELAMRFGSG------------------------------- 164
           +Y   +   C+ G+++ A R       SG                               
Sbjct: 549 TYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCM 608

Query: 165 --------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  ++ LI+GL K  K++EA  +  E++D+G+ P+V TY+++IS+LC  G++
Sbjct: 609 LDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL 668

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +   M  +G NPNI ++ +L+ G    G   +A +L++ +  +G   N V YST+
Sbjct: 669 KAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTI 728

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C + ++ EA  + + M+    PP+   Y ALIDG  KAGN   A  ++  M+  G 
Sbjct: 729 IAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + +  A+  ++    +     +A+ L+E M   +  PN VT+   I+  C  G +  A +
Sbjct: 789 A-STPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQ 847

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  +M++   +PN+ TY  LL G  R+ R  E F L  E+   GI+ + + ++ ++    
Sbjct: 848 LFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHL 907

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G  ++A +L+  ML EG  +    + I+I A CK   ++  +++LD +   G     +
Sbjct: 908 KEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGS-KLSL 966

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKML 543
            +  +L+     +G   EA   L+ M+
Sbjct: 967 ATCGTLVCCFHRAGRTDEALRVLESMV 993



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/575 (25%), Positives = 277/575 (48%), Gaps = 11/575 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + L  +M + G+      +  +I  Y +V   E+A ++   I++  L     +  
Sbjct: 387 DLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCG 446

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L      +  N ++  M   G++PN+  Y  ++K L K  R + A K+L  M ++
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ 506

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G +PD   Y T++   CK G++EE +      +A      V  Y A I+G C+  +++ A
Sbjct: 507 GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAA 566

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM+D GI PN +  + +I   C  GN   +      M  +G  P++ + + L+ G
Sbjct: 567 ERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHG 626

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  EA  +++ ++ +G +P+V  Y++LI  LC  G +  A  +   M +    PN
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+ALI+G  K G +  A ++++ +   G + N V Y+ ++   C++    +A  L  
Sbjct: 687 IVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFH 746

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M     PP++  +   I G C  G  + A+ L   M + E + +   +N L+DG  ++ 
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE-EGIASTPAFNALIDGFFKLG 805

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           ++ EA++LV ++    I  N VTY  ++   C  G + EA QL  +M       + +T+ 
Sbjct: 806 KLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYT 865

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +++ Y + G+ +    L D +   G   PD ++++ ++      G   +A   +  ML+
Sbjct: 866 SLLHGYNRIGRRSEMFSLFDEMVARG-IKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLS 924

Query: 545 EG--ICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           EG  +C N  T  +L+ +L  +      + +LD++
Sbjct: 925 EGVNVCKNLYT--ILIDALCKHNNLSEVLKVLDEV 957



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 205/400 (51%), Gaps = 1/400 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  Y  LIN  C+  K+EE   +L +M ++G  PN++TYS +I+ LC  G+V+ +L +  
Sbjct: 232 VYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKR 291

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M  +G  P+ + + +L+ G+    R+ E   + + M   G  P+ VAY+ LI+G     
Sbjct: 292 SMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQS 351

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +  A  V  +M       N  TY ALI G  K G+L  A  +++ M   G  P++  Y 
Sbjct: 352 DIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYN 411

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
           C+++   +     +A+ L+ ++  EN   N       + GLC CG +  A +L  +M  +
Sbjct: 412 CLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISW 471

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PNI  Y  ++ GL++  R +EA +++  ++  G+  ++  YNT++ G C+AG + E 
Sbjct: 472 GLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEG 531

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
              L +M+ +G K +  T+   I+ YC+ G++  A +    +   G    D+I  T L+ 
Sbjct: 532 KSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVIC-TDLID 590

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G C  G   +AF   + ML++G+ P+  T +VL+  L  N
Sbjct: 591 GYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 209/439 (47%), Gaps = 6/439 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   +    +M   G++ ++ +   +I+ Y + G   +A   F  + + G+ P V+ ++
Sbjct: 562 EMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHS 621

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L    +      ++S +   G+ P+VFTY  L+  LCK   +  A++L  +M  K
Sbjct: 622 VLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V+Y  +++ +CKLG++ +AREL               Y+ +I G CK   + EA
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L   M   G+ P+   Y  +I   C  GN E +L +   M   G   +  +F +L+ G
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDG 800

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G+  EA  L   M+     PN V Y+ LI   C+ G++ EA  +  +M++ +  PN
Sbjct: 801 FFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPN 860

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY++L+ G+ + G       +++ M++ G  P+ +A++ MV    +   + +A  L++
Sbjct: 861 VLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVD 920

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  E        +   I  LC    +   +K+LD++++     ++ T   L+    R  
Sbjct: 921 DMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAG 980

Query: 425 RVKEAFELVTEIEKCGIQL 443
           R  EA  ++  + +  + L
Sbjct: 981 RTDEALRVLESMVRSFLNL 999



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 498 NAIQLLDRIRGG--GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           N ++L  ++  G  G   PD+ +YT+L+   C  G ++E    L  M  +G  PN  T++
Sbjct: 212 NRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYS 271

Query: 556 VLVRSLFSNLGHLGPVYILDDIMANK 581
           V++  L    G +     L   MANK
Sbjct: 272 VVIAGL-CRAGDVDEALELKRSMANK 296


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 275/541 (50%), Gaps = 32/541 (5%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L++M+  G   +   +  +I+   + G  ++AL+++ R+   GLKP++K ++ ++ A   
Sbjct: 182 LEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGK 241

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G+ PN++TY I ++ L ++ ++D AY+++  M + GC PD V+
Sbjct: 242 RRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVT 301

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           YT                               LI+ LC   K+++A  L  +M      
Sbjct: 302 YT------------------------------VLIDALCTARKLDDAMCLFTKMKSSSHK 331

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+ +TY T++    D G+++    I  +M   G  P++ +FT L+      GR +EA DL
Sbjct: 332 PDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDL 391

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + M ++G LPN+  Y+TLI GL     +D+A+ +   ME     P   TY  LID   K
Sbjct: 392 LDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGK 451

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           +G+   A + + +M + G +PN+VA    +  L +     +A ++  ++      P++VT
Sbjct: 452 SGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVT 511

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  +K     G+VD A+KLL +M + +C P++   N L+D L +  RV+EA+++   +E
Sbjct: 512 YNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRME 571

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +  +   +VTYN +L G+ + G + +A QL   M   G   + ITFN ++   CK  +V+
Sbjct: 572 EMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVD 631

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+++  ++       PD++++ +++ G      ++ A I+L   + + + P+  T   L
Sbjct: 632 LALKMFYKMTTMN-CRPDVLTFNTIIHGFIKQNQIKNA-IWLFHQMKKLLRPDHVTLCTL 689

Query: 558 V 558
           +
Sbjct: 690 L 690



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 279/572 (48%), Gaps = 13/572 (2%)

Query: 5    LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
            L E   +   + +  ++K  G++     +  ++  Y +VG  ++A+K+   + +   +P 
Sbjct: 484  LAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPD 543

Query: 65   VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
            V + N ++D L    R      ++  M+   + P V TYNILL  L K  ++  A +L  
Sbjct: 544  VIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFE 603

Query: 125  EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
             M   GC+P+ +++ T++  +CK  +V+ A ++  +  +      V  +N +I+G  K++
Sbjct: 604  SMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQN 663

Query: 180  KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSF 238
            +I+ A WL  +M  + + P+ +T  T++  +   G +E +  I    F + G N +   +
Sbjct: 664  QIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFW 722

Query: 239  TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-E 297
              ++ G L    T +A     R++      +      +I  LC +     A +V  +  +
Sbjct: 723  EDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTK 782

Query: 298  ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
            E    P +  Y+ LIDGF +  N+  A  ++  M S GC+P+   Y  ++    ++   +
Sbjct: 783  ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKIN 842

Query: 358  QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            +   L ++M    C PNT+T+N  I  L    R+D AM L   +   +  P   T+  L+
Sbjct: 843  ELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLI 902

Query: 418  DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            DGLL+  R+ +A E+   +   G + N   YN +++G  + G V  A +   +M+ EG +
Sbjct: 903  DGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIR 962

Query: 478  LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
             D  ++ I++   C  G+V++A+   ++++  G  +PD+++Y  ++ G+  S   +EA  
Sbjct: 963  PDLKSYTILVDILCIAGRVDDALHYFEKLKQAG-LDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 538  YLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
               +M N GI P+  T+N    SL  NLG +G
Sbjct: 1022 LFHEMQNRGIVPDLYTYN----SLILNLGIVG 1049



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 263/591 (44%), Gaps = 81/591 (13%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
            ++D    LL +M    V C   V +  S+I++  + G  E+A +MF R+ E  L PTV  
Sbjct: 524  QVDEAIKLLSEM--SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVT 581

Query: 68   YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
            YN +L  L  E +      ++ +M   G  PN  T+N LL  LCKN+ VD A K+  +M 
Sbjct: 582  YNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMT 641

Query: 128  NKGCAPDAVSYTTIVS---------------------------SICKL-------GQVEE 153
               C PD +++ TI+                            ++C L       GQ+E+
Sbjct: 642  TMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIED 701

Query: 154  A--------------------------------RELAMRFGSGV---------SVYNALI 172
            A                                 E A+ FG  +         SV   +I
Sbjct: 702  AFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPII 761

Query: 173  NGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
              LCK  K   A  +  +     G+ P +  Y+ +I    +V NVE +  +  +M   GC
Sbjct: 762  KVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGC 821

Query: 232  NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             P+  ++ SL+  +   G+ +E  DL++ M+  G  PN + Y+ +I  L  +  +D+A+ 
Sbjct: 822  APDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD 881

Query: 292  VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
            + Y +      P   T+  LIDG  K+G L  A ++++ M+  GC PN   Y  +V    
Sbjct: 882  LYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYG 941

Query: 352  QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
            +      A    ++M  E   P+  ++   +  LC  GRVD A+   +++KQ    P++ 
Sbjct: 942  KLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLV 1001

Query: 412  TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
             YN +++GL R  R +EA  L  E++  GI  ++ TYN+++  +   GM+ EA ++  ++
Sbjct: 1002 AYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061

Query: 472  LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
               G K +  T+N +I  Y   G    A  +  ++  GG  +P+  ++  L
Sbjct: 1062 QFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGG-CDPNTGTFAQL 1111



 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/606 (24%), Positives = 283/606 (46%), Gaps = 50/606 (8%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  L     +D    L   M+  GV  +   +I +I+ + + G   +AL+ F +++  G
Sbjct: 410  LISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG 469

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            + P +   N  L +L    R      +++ +K  G+ P+  TYN+++K   K  +VD A 
Sbjct: 470  IAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAI 529

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            KLL EM    C PD +   +++ ++ K G+VEEA     R   M     V  YN L+ GL
Sbjct: 530  KLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGL 589

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             KE +I++A  L   M   G  PN IT++T++  LC    V+ +L +  +M    C P++
Sbjct: 590  GKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDV 649

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS-- 293
             +F +++ G++   +   A  L+++M ++   P+ V   TL+ G+  +G +++A  ++  
Sbjct: 650  LTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITED 708

Query: 294  --YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              YQ+  N    + + +  ++ G         A     R++      +      ++KVLC
Sbjct: 709  FFYQVGSNI---DRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLC 765

Query: 352  QNNM------------------------------FHQAHS------LIEKMAFENCPPNT 375
            ++                                F + H+      L E+M    C P+T
Sbjct: 766  KHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDT 825

Query: 376  VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
             T+N+ I      G+++    L D+M    C PN  TYN ++  L++ NR+ +A +L   
Sbjct: 826  FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885

Query: 436  IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
            +          T+  ++ G+ ++G + +A ++   M+  G + ++  +NI++  Y K G 
Sbjct: 886  LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945

Query: 496  VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
            V+ A +   R+   G   PD+ SYT L+  +C +G + +A  Y +K+   G+ P+   +N
Sbjct: 946  VDTACEFFKRMVKEG-IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYN 1004

Query: 556  VLVRSL 561
            +++  L
Sbjct: 1005 LMINGL 1010



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 244/498 (48%), Gaps = 31/498 (6%)

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           T +  NH+L+ L    R   +  ++  M+R  +  NV TY I+ K+L     +  A   L
Sbjct: 123 TTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSAL 182

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
            +M   G   +A SY  ++  + + G  +EA E+  R                       
Sbjct: 183 EKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRR----------------------- 219

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
                  MV  G+ P++ T+S ++ +     N++T +G+L +M   G  PNI+++T  ++
Sbjct: 220 -------MVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIR 272

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                G+  EA  +  RM  +G  P+VV Y+ LI  LC+   +D+A+ +  +M+ +S  P
Sbjct: 273 VLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY  L+D F+  G+L    +IW  M ++G +P+VV +T +V  LC+    ++A  L+
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           + M  +   PN  T+NT I GL    R+D A+ L   M+     P   TY  L+D   + 
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKS 452

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
               +A E   +++  GI  NIV  N  L+ +   G + EA  +  ++   G   D++T+
Sbjct: 453 GHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N+++  Y K G+V+ AI+LL  +    +  PD+I   SL+  +  +G ++EA+    +M 
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEM-SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRME 571

Query: 544 NEGICPNFATWNVLVRSL 561
              + P   T+N+L+  L
Sbjct: 572 EMNLAPTVVTYNILLAGL 589



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 198/400 (49%), Gaps = 2/400 (0%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N ++  L    ++E+  ++   M  + I  NV TY  I  SL   G +  +   L +M  
Sbjct: 128 NHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMRE 187

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G   N +S+  L+   L  G   EA +++ RM+ EG  P++  +S L+       ++  
Sbjct: 188 AGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKT 247

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
            + +  +ME     PN+ TY+  I    + G +  A +I  RM  +GC P+VV YT ++ 
Sbjct: 248 VMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLID 307

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC       A  L  KM   +  P+ VT+ T +     CG +D   K+  +M+     P
Sbjct: 308 ALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAP 367

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ T+  L++ L +  R+ EAF+L+  + K G+  N+ TYNT++ G+ RA  + +A  L 
Sbjct: 368 DVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF 427

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M   G +  A T+ ++I  + K G    A++  ++++  G   P+I++  + L+ +  
Sbjct: 428 SNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG-IAPNIVACNASLYSLAE 486

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G + EA     ++ + G+ P+  T+N++++  +S +G +
Sbjct: 487 MGRLGEAKAMFNELKSSGLAPDSVTYNMMMKC-YSKVGQV 525



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 96/192 (50%), Gaps = 1/192 (0%)

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           N    T T N  ++ L    RV+    + D M++     N+ TY  +   L     +++A
Sbjct: 119 NVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQA 178

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
              + ++ + G  LN  +YN ++H + ++G   EA ++  +M+ EG K    TF+ ++ A
Sbjct: 179 PSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVA 238

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             K+  +   + LL+ +   G   P+I +YT  +  +   G + EA+  +++M ++G  P
Sbjct: 239 SGKRRNIKTVMGLLEEMESMG-LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGP 297

Query: 550 NFATWNVLVRSL 561
           +  T+ VL+ +L
Sbjct: 298 DVVTYTVLIDAL 309



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 46/103 (44%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI  LG     +    L  +M+  G+      + S+I +   VG+ E+A K++  ++  G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
            LKP V  YN ++          +   IY  M   G +PN  T+
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 281/543 (51%), Gaps = 18/543 (3%)

Query: 30  EGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           E   + V NS+ R        ++ Y  +++G  P V  ++     L+          ++ 
Sbjct: 153 EKPHLDVGNSFDRF-----TERLIYTYKDWGAHPLV--FDVFFQVLVEAGLLLEAGKLFD 205

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDG---AYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            +   G+  +V + N+ L  L  +N  DG   A+++  E    G   + VSY  I+  +C
Sbjct: 206 KLLNYGVLVSVDSCNLFLARL--SNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLC 263

Query: 147 KLGQVEEAREL--AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           +LG+V+EA  L   M F   V     Y+ +++G C+  ++ +   L+ E+  +G+ PN  
Sbjct: 264 QLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQY 323

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY++IIS LC  G V  +  +L  M  +   P+   +T+L+ G+   G       L++ M
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            R+  +P+ V Y+++IHGLC  G + EA  +  +M      P+  TY+ALIDG+ KAG +
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM 443

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  + N+M+  G +PNVV YT +V  LC+      A+ L+ +M+ +   PN  T+N  
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC  G ++ A+KL+++M      P+  TY  ++D   ++  + +A EL+  +   G+
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL 563

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           Q  IVT+N +++G C +GM+ +  +L+  ML +G   +A TFN ++  YC +  +   I+
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   +   G   PD  +Y  L+ G C +  M+EA+   ++M+ +G     A++N L++  
Sbjct: 624 IYKGMHAQGVV-PDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682

Query: 562 FSN 564
           +  
Sbjct: 683 YKR 685



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 236/467 (50%), Gaps = 5/467 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A ++F    E G+      YN IL  L    +    + +   M+  G  P+V +Y++++ 
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGS 163
             C+  ++    KL+ E+  KG  P+  +Y +I+S +CK G+V EA ++       R   
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
              VY  LI+G  K   +   + L  EM  + I P+ +TY+++I  LC  G V  +  + 
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M  +G  P+  ++T+L+ GY   G   EA  L N+M+ +G  PNVV Y+ L+ GLC  
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G +D A  + ++M E    PNV TY+ALI+G  K GN+  A ++   M   G  P+ + Y
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T ++   C+     +AH L+  M  +   P  VTFN  + G C  G ++   +L+  M  
Sbjct: 536 TTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLD 595

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              +PN TT+N L+      N ++   E+   +   G+  +  TYN ++ G C+A  + E
Sbjct: 596 KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKE 655

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           A+ L  +M+ +G  L A ++N +I  + K+ K   A +L + +R  G
Sbjct: 656 AWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 235/468 (50%), Gaps = 5/468 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           ++G  ++A  +  ++   G  P V  Y+ I+D      +   +  +   ++R G++PN +
Sbjct: 264 QLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQY 323

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
           TYN ++  LCK  RV  A ++L  M N+   PD V YTT++S   K G V    +L    
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              +       Y ++I+GLC+  K+ EA  L  EM+ +G+ P+ +TY+ +I   C  G +
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM 443

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +  QM  +G  PN+ ++T+L+ G    G    A++L + M  +G  PNV  Y+ L
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+GLC  G++++AV +  +M+     P+  TY+ ++D + K G +  A ++   M+  G 
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL 563

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P +V +  ++   C + M      LI+ M  +   PN  TFN+ +K  C    +   ++
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +   M     +P+  TYN L+ G  +   +KEA+ L  E+ + G  L   +YN+++ G  
Sbjct: 624 IYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFY 683

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +     EA +L  +M   G   +   ++I +    ++G   N ++L D
Sbjct: 684 KRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCD 731



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 268/528 (50%), Gaps = 25/528 (4%)

Query: 42  RVGLAEQALKMFYR-IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           ++ +A + L+M +R + EF  KP + + N         +RF+    IY+  K  G  P V
Sbjct: 133 QIAVASKDLRMAHRLVFEFWEKPHLDVGNSF-------DRFTE-RLIYT-YKDWGAHPLV 183

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           F  ++  + L +   +  A KL  ++ N G     VS  +    + +L    +    A R
Sbjct: 184 F--DVFFQVLVEAGLLLEAGKLFDKLLNYGVL---VSVDSCNLFLARLSNSFDGIRTAFR 238

Query: 161 FGSGVS---------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                S          YN +++ LC+  K++EA  LL +M  RG  P+V++YS I+   C
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            V  +   L ++ ++  +G  PN +++ S++      GR  EA  +   M  +   P+ V
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TLI G   +G++     +  +M+     P+  TY+++I G  +AG ++ A ++++ M
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +S G  P+ V YT ++   C+     +A SL  +M  +   PN VT+   + GLC CG V
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEV 478

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A +LL +M +    PN+ TYN L++GL +V  +++A +L+ E++  G   + +TY TI
Sbjct: 479 DIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +   C+ G + +A +LL  ML +G +   +TFN+++  +C  G + +  +L+  +   G 
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG- 597

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             P+  ++ SL+   C    M+      + M  +G+ P+  T+N+L++
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIK 645



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 230/450 (51%), Gaps = 18/450 (4%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVIN---SYRRVGLAEQALKMFYRIRE 58
           +E+LG+      V  L+++++ +G+  ++  + S+I+      RV  AEQ L++    R 
Sbjct: 300 VEQLGK------VLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           F   P   +Y  ++         S+   ++  MKR  + P+  TY  ++  LC+  +V  
Sbjct: 354 F---PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALIN 173
           A KL  EM +KG  PD V+YT ++   CK G+++EA  L  +         V  Y AL++
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  +++ A  LL EM ++G+ PNV TY+ +I+ LC VGN+E ++ ++ +M + G  P
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  ++T+++  Y   G   +A +L   M+ +G  P +V ++ L++G C +G +++   + 
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLI 590

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M +    PN TT+++L+  +    N+    +I+  M + G  P+   Y  ++K  C+ 
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L ++M  +       ++N+ IKG     + + A KL ++M+ +  +     Y
Sbjct: 651 RNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIY 710

Query: 414 NELLDGLLRVNRVKEAFELVTE-IEKCGIQ 442
           +  +D        +   EL  E IEKC ++
Sbjct: 711 DIFVDVNYEEGNWENTLELCDEAIEKCLVK 740



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 161/325 (49%), Gaps = 5/325 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  ++   + L  +M  +G+   E  + ++I+ Y + G  ++A  +  ++ E G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y  ++D L       + N +   M   G++PNV TYN L+  LCK   ++ A 
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           KL+ EM   G  PD ++YTTI+ + CK+G++ +A E L +    G+      +N L+NG 
Sbjct: 518 KLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGF 577

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    +E+   L+  M+D+GI PN  T+++++   C   N+  ++ I   M  +G  P+ 
Sbjct: 578 CMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDT 637

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  L+KG+       EA  L   M+ +GF     +Y++LI G       +EA  +  +
Sbjct: 638 NTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEE 697

Query: 296 MEENSCPPNVTTYSALIDGFAKAGN 320
           M  +        Y   +D   + GN
Sbjct: 698 MRTHGFIAEKEIYDIFVDVNYEEGN 722


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 266/506 (52%), Gaps = 7/506 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PT+  YN +++      R  +  P++  + R G+ P+VF+YN L+    K   VD A+ L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCK 177
             +M  +G  P+ V+Y+++++ +CK  ++++A R L    G+GV      YN LI+G   
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
               +E+  +  EM    + P+V   ++ +++LC  G ++ +  I   M ++G  P++ S
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +LL GY   G      +L+N M+ EG +P+   ++TLI+     G MD+++ +   M 
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    P++ T+S +I  F + G L  A + +N MI  G  P+   Y+C+++  C      
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 415

Query: 358 QAHSLIEKMAFENCPPNTVTFNT-FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           +A  LI  M  +  PP  + F T  I  LC  GRV     ++D +      PN+ T+N L
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 475

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DG   V  +KEA  L+  +E  G++ +I TYNT++ G C+ G + +A  L   ML +  
Sbjct: 476 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 535

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            L ++++NII++   +  +   A ++   +   G     I +Y ++L G+C +    EA 
Sbjct: 536 TLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG-MAVSIHTYATVLGGLCRNNCTDEAN 594

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLF 562
           + L+K+ +  +  +  T+N+++R++F
Sbjct: 595 MLLEKLFSMNVKFDILTFNIVIRAMF 620



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 256/532 (48%), Gaps = 7/532 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN YRR    +  L +F R+   GL P V  YN ++D    E      + ++  M+  G
Sbjct: 124 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 183

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LCK   +D A ++L +M   G  P+ ++Y  ++      G  +E+ 
Sbjct: 184 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 243

Query: 156 ELAMRFGSGVSVY-----NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            +     S + V      N+ +  LCK  +I+EA  +   MV +G  P+VI+Y  ++   
Sbjct: 244 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGY 303

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
              G +     +   M   G  P+ H F +L+  Y   G   ++  ++  M ++G  P++
Sbjct: 304 ATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDI 363

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + +ST+I   C  G +D+A+     M +   PP+   YS LI G     +L+ A ++ + 
Sbjct: 364 ITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISD 423

Query: 331 MISNGCSPNVVA-YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           M+S G  P  +  +T ++  LC+     +   +++ +      PN +TFN+ + G C  G
Sbjct: 424 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 483

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A+ LLD M+     P+I TYN L+DG  +  R+ +A  L  ++    + L  V+YN
Sbjct: 484 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 543

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ILHG+ +A   + A ++  +M+  G  +   T+  ++   C+    + A  LL+++   
Sbjct: 544 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL-FS 602

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                DI+++  ++  +   G  QEA      +   G+ P   T+ V++ +L
Sbjct: 603 MNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 654



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 261/544 (47%), Gaps = 41/544 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  E+D  + +L+QM   GV  +   +  +I+ Y   G+ ++++++F  +    
Sbjct: 194 LINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSL 253

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY----------------- 103
           L P V   N  + AL    R      I+ +M   G +P+V +Y                 
Sbjct: 254 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMD 313

Query: 104 ------------------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                             N L+ A  +   +D +  +  +M  +G  PD ++++T++S+ 
Sbjct: 314 NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 373

Query: 146 CKLGQVEEARE-LAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C+LG++++A E       +GV    +VY+ LI G C    + +A  L+ +M+ +GI P  
Sbjct: 374 CRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPC 433

Query: 201 ITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           I + ++II++LC  G V     ++  +   G  PN+ +F SL+ GY L G   EA  L +
Sbjct: 434 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 493

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M   G  P++  Y+TL+ G C +G +D+A+++   M          +Y+ ++ G  +A 
Sbjct: 494 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 553

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             + A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +TFN
Sbjct: 554 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFN 613

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I+ +   GR   A +L   +  Y  +P I TY  ++  L++    ++A  L + +EK 
Sbjct: 614 IVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 673

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
               +    N I+  +   G V +A   L K+  +G   +A T +++IY +   GK    
Sbjct: 674 SCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREY 733

Query: 500 IQLL 503
           I+LL
Sbjct: 734 IKLL 737



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/569 (23%), Positives = 266/569 (46%), Gaps = 8/569 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ E+D    L  +M+ +G+  +   + S+IN   +    ++A ++  ++   G
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++        +     ++  M    + P+V   N  + ALCK+ R+  A 
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGV----SVYNALINGL 175
            +   M  KG  PD +SY  ++      G +     L  +    GV     V+N LIN  
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   ++++  +  +M  +G++P++IT+ST+IS+ C +G ++ ++     M   G  P+ 
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 398

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA-YSTLIHGLCSNGSMDEAVSVSY 294
             ++ L++G        +A +L + M+ +G  P  +  ++++I+ LC  G + E   V  
Sbjct: 399 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 458

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +      PN+ T+++L+DG+   GN+  A  + + M S G  P++  Y  +V   C++ 
Sbjct: 459 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 518

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A +L   M  +     +V++N  + GL    R   A ++  +M +     +I TY 
Sbjct: 519 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYA 578

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            +L GL R N   EA  L+ ++    ++ +I+T+N ++  + + G   EA +L   +   
Sbjct: 579 TVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTY 638

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G     +T+ ++I    K+    +A  L   +       PD      ++  + N G + +
Sbjct: 639 GLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS-CTPDSRILNEIIRMLLNKGEVAK 697

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  YL K+  +GI P   T ++L+  LFS
Sbjct: 698 AGNYLSKIDKKGILPEATTTSLLI-YLFS 725



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 214/432 (49%), Gaps = 8/432 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I G+  L   M  EGV     VF ++IN+Y R+G+ +++L MF  + + G+ P +  ++ 
Sbjct: 309 IAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFST 368

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ A     R       +++M   G+ P+   Y+ L++  C    +  A +L+ +M +KG
Sbjct: 369 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 428

Query: 131 CAPDAVSY-TTIVSSICKLGQVEEARE---LAMRFGS--GVSVYNALINGLCKEHKIEEA 184
             P  + + T+I++++CK G+V E ++   L +  G    +  +N+L++G C    ++EA
Sbjct: 429 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 488

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M   G++P++ TY+T++   C  G ++ +L +   M  +       S+  +L G
Sbjct: 489 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 548

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                RT  A ++++ MI  G   ++  Y+T++ GLC N   DEA  +  ++   +   +
Sbjct: 549 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 608

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ +I    K G    A +++  + + G  P ++ Y  M+  L +   F  A +L  
Sbjct: 609 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 668

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M   +C P++   N  I+ L   G V  A   L ++ +   LP  TT   LL  L  VN
Sbjct: 669 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATT-TSLLIYLFSVN 727

Query: 425 -RVKEAFELVTE 435
            + +E  +L+ E
Sbjct: 728 GKYREYIKLLPE 739


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 175/613 (28%), Positives = 278/613 (45%), Gaps = 83/613 (13%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+++ Y +VG  E A  +  R++  G+   V  YN ++  L           +   MKRD
Sbjct: 179 SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRD 238

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+EPNV TY + +   C+ N VD A+ L  EM  KG  PD V+ + +V  +CK G+  EA
Sbjct: 239 GVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEA 298

Query: 155 ----REL---------------------AMRFGSGVSV---------------YNALING 174
               RE+                     A R    +S+               Y AL++ 
Sbjct: 299 YALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDW 358

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCKE KI+EA  +    +     PN +TY+ +I +LC  GNV+ +  +L +M  +  +PN
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST------------------- 275
           + +F+S++ G +  G   +A+D    M   G  PNVV Y T                   
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYH 478

Query: 276 ----------------LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
                           L++GL  NG +++A ++  +M E     +   Y+ LIDG  K G
Sbjct: 479 EMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTG 538

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           NL  A ++   +      P+ V Y   +  LC      +A S +E+M      P+ VT+N
Sbjct: 539 NLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYN 598

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I      G+   A+KLL+ MK+    PN+ TY+ L+ GL     V++A  L+ E+   
Sbjct: 599 TMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSS 658

Query: 440 GIQLNIVTYNTILHGVC---RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           G     +T+  +L       R+ +++E  +    M+  G   D   +N ++   C  G  
Sbjct: 659 GFSPTSLTHRRVLQACSQGRRSDLILEIHEW---MMNAGLCADITVYNTLVRVLCYNGMT 715

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A+ +L+ + G G   PD I++ +L+ G   SG +  AF    +ML  GI PN AT+N 
Sbjct: 716 RKAMVVLEEMSGRG-IAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNT 774

Query: 557 LVRSLFSNLGHLG 569
           L+  L S  G +G
Sbjct: 775 LLGGLES-AGRIG 786



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 241/495 (48%), Gaps = 14/495 (2%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N ++D             +   MK  G+  +V  YN L+  LC+   VD A  ++  M 
Sbjct: 177 WNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMK 236

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIE 182
             G  P+ V+YT  +   C+   V++A  L    +R G    V   +AL+ GLCK+ +  
Sbjct: 237 RDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFS 296

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA+ L  EM   G  PN +TY  +I +L        SL +LG++  RG   ++  +T+L+
Sbjct: 297 EAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALM 356

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                 G+  EA D++   + +   PN V Y+ LI  LC  G++D A  V  +MEE S  
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV----KVLCQNNMFHQ 358
           PNV T+S++I+G  K G +  A+     M   G  PNVV Y  ++    K L Q      
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV 476

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
            H    +M  E    N    ++ + GL   G+++ A  L  +M +   L +   Y  L+D
Sbjct: 477 YH----EMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL +   +  AF++  E+ +  +  + V YN  ++ +C  G   EA   L +M   G K 
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKP 592

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D +T+N +I A  ++GK   A++LL+ ++      P++I+Y++L+ G+  +G +++A   
Sbjct: 593 DQVTYNTMIAAQSREGKTAKALKLLNGMK-RSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651

Query: 539 LQKMLNEGICPNFAT 553
           L +M + G  P   T
Sbjct: 652 LNEMSSSGFSPTSLT 666



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 244/476 (51%), Gaps = 9/476 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R     +  +YN+++    +   +     LL EM  +G   DAV+  T++  +C+ G+V+
Sbjct: 96  RSSESVDTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVD 154

Query: 153 EARELA--MRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            A  LA  M  G G+       +N+L++G CK   +E AF +   M  +G+  +V+ Y++
Sbjct: 155 RAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNS 214

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +++ LC  G V+ +  ++  M   G  PN+ ++T  +  Y       +A  L+  M+R+G
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            LP+VV  S L+ GLC +G   EA ++  +ME+    PN  TY  LID  AKA     + 
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +   ++S G   +++ YT ++  LC+     +A  +      +N  PN VT+   I  L
Sbjct: 335 SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDAL 394

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G VD A ++L +M++    PN+ T++ +++GL++   V +A + + E+++ GI  N+
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNV 454

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTY T++ G  +      A  +  +ML EG +++    + ++    K GK+  A  L   
Sbjct: 455 VTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFRE 514

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G    D ++YT+L+ G+  +G +  AF   Q++  + + P+   +NV +  L
Sbjct: 515 MNERGVL-LDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCL 569



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 268/566 (47%), Gaps = 32/566 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +DG + +L +M+ + +S +   F S+IN   + G   +A      ++E G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  ++D             +Y  M  +G+E N F  + L+  L KN +++ A 
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  EM  +G   D V+YTT                              LI+GL K   
Sbjct: 510 ALFREMNERGVLLDHVNYTT------------------------------LIDGLFKTGN 539

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF +  E+ ++ + P+ + Y+  I+ LC +G  + +   L +M   G  P+  ++ +
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++      G+T +A  L N M R    PN++ YSTLI GL   G++++A  +  +M  + 
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P   T+  ++   ++        +I   M++ G   ++  Y  +V+VLC N M  +A 
Sbjct: 660 FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++E+M+     P+T+TFN  I G    G +D A    DQM  +   PN+ T+N LL GL
Sbjct: 720 VVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
               R+ E+  ++ E++K GI+ + +TY+ ++ G  +    VEA +L  +M+ +G     
Sbjct: 780 ESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKV 839

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+N +I  + K G ++ A +L + ++  G   P   +Y  L+ G        E   +L+
Sbjct: 840 STYNALISDFSKVGMMSQAKELFNEMQNRGVL-PTSCTYDILVSGWSKLRNGTEVRKFLK 898

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLG 566
            M  +G  P+  T + + R+ FS  G
Sbjct: 899 DMKEKGFSPSKGTLSSISRA-FSKPG 923



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 200/443 (45%), Gaps = 5/443 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  +I+  + L ++M   GV      + ++I+   + G    A K+   + E  
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P   +YN  ++ L    +          M+  G++P+  TYN ++ A  +  +   A 
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMRFGSGVSVYNALINGLC 176
           KLL  M      P+ ++Y+T++  + + G VE+A+    E++    S  S+ +  +   C
Sbjct: 615 KLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQAC 674

Query: 177 KEHKIEEAFWLLCE-MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            + +  +    + E M++ G+  ++  Y+T++  LC  G    ++ +L +M  RG  P+ 
Sbjct: 675 SQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDT 734

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L+ G+   G    A   +++M+  G  PNV  ++TL+ GL S G + E+  V  +
Sbjct: 735 ITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNE 794

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++    P+  TY  L+ G+ K  N + A +++  M+  G  P V  Y  ++    +  M
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             QA  L  +M      P + T++  + G           K L  MK+    P+  T + 
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914

Query: 416 LLDGLLRVNRVKEAFELVTEIEK 438
           +     +     EA  L+  + K
Sbjct: 915 ISRAFSKPGMSWEARRLLKNLYK 937


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 143/552 (25%), Positives = 293/552 (53%), Gaps = 8/552 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++++ Y ++GLA+ A   F  + ++G+ P    YN ++  L+          + ++M+
Sbjct: 188 FNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDME 247

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQV 151
           + G++P++ TY I+ K       + GA +++ +M  ++G  PD V+YT ++   C++G +
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNI 307

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA       L+  F   V +Y+ L++ LCK  +++EA  LL EM    + P+++TYS +
Sbjct: 308 EEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL 367

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC  G V+ ++ +  +M      PN  + + +LKG    G   +A   ++ +I    
Sbjct: 368 IHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNL 427

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+V  Y+ +I G    G ++EAV +  ++ + +  P++ T+++LI GF K   ++ A +
Sbjct: 428 RPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARR 487

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   +  +G  P+ V YT ++   C+    ++ H L+ +M  ++  P  VT+   IKGLC
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLC 547

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +++ +++LL+ M+     P+  TYN ++    +   +++AFEL+ ++    ++    
Sbjct: 548 KQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPA 607

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TYN ++ G+CR G V +A ++L  +      L  + +  +I A+C +G    A+++  ++
Sbjct: 608 TYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM 667

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G +   I  Y++++  +C    + EA  Y   ML++G+ P+   + +++ + F   G
Sbjct: 668 VEKG-FEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNA-FHRAG 725

Query: 567 HLGPVYILDDIM 578
           H+  V+ L  +M
Sbjct: 726 HVHSVFELLAVM 737



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 262/553 (47%), Gaps = 70/553 (12%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           +   AL +  +++E  L+P+++ YN +L  L       ++  +Y+++K  G   +  T +
Sbjct: 98  MVHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSS 154

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG 164
           I++  LC  +R   A   L +   K  AP  VS+ TI+S  CKLG  + A+         
Sbjct: 155 IIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSF------- 207

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
                                   C M+  GI P+  +Y+ +I  L   G++E +L +  
Sbjct: 208 -----------------------FCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTN 244

Query: 225 QMFVRGCNPNIHSFTSLLKGY-LLG----------------------------------- 248
            M  +G  P++ ++  + KG+ LLG                                   
Sbjct: 245 DMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQM 304

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L   ++  GF  NV+ YS L+  LC  G +DEA+ + Y+ME N+  P++ TY
Sbjct: 305 GNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTY 364

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI G  K G +  A Q++  M  N   PN  A++ ++K LC+  M   A    + +  
Sbjct: 365 SILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIM 424

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            N  P+   +N  I G    G V+ A++L  +++     P+I T+N L+ G  +  +V E
Sbjct: 425 SNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVE 484

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  L+  I+  G++ + VTY T+++  C  G + +  +LL +M ++  +   +T+ ++I 
Sbjct: 485 ARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIK 544

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             CKQ K+  ++QLL+ +R  G   PD I+Y +++   C +  M++AF  L  ML   + 
Sbjct: 545 GLCKQRKLEESVQLLEDMRAKG-LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603

Query: 549 PNFATWNVLVRSL 561
           P  AT+NVL+  L
Sbjct: 604 PTPATYNVLIDGL 616



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 256/511 (50%), Gaps = 9/511 (1%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           +EF   P+V  +N I+          +    +  M + G+ P+ ++YNIL+  L     +
Sbjct: 179 KEFA--PSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSM 236

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNA 170
           + A +L  +M  +G  PD V+Y  +      LG +  ARE+  +          +  Y  
Sbjct: 237 EEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTV 296

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI G C+   IEEA  L  +++  G   NVI YS ++SSLC  G V+ +L +L +M    
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             P++ +++ L+ G    G+  +A  L+  M      PN  A+S ++ GLC  G + +A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
                +  ++  P+VT Y+ +IDG+ K G++  A +++ R+     +P++V +  ++   
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+N    +A  L+E +      P+ VT+ T +   C  G ++   +LL +M   +  P +
Sbjct: 477 CKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTV 536

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  ++ GL +  +++E+ +L+ ++   G+  + +TYNTI+   C+A  + +AF+LL  
Sbjct: 537 VTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 596

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           MLI   +    T+N++I   C+ G V +A ++L  ++     N   ++YT+++   C  G
Sbjct: 597 MLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN-INLTKVAYTTMIKAHCVKG 655

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             Q A     +M+ +G   +   ++ ++  L
Sbjct: 656 DAQRAVKVFHQMVEKGFEVSIKDYSAVINRL 686



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 233/502 (46%), Gaps = 47/502 (9%)

Query: 11  IDGVQYLLQQMKV-EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + G + ++Q+M   EG+      +  +I  + ++G  E+AL++   +   G +  V +Y+
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYS 330

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L +L    +      +   M+ + ++P++ TY+IL+  LCK  +V  A +L  EM   
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN 390

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--------GVSVYNALINGLCKEHKI 181
              P++ +++ I+  +C+ G + +AR   M F S         V++YN +I+G  K   +
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDAR---MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           EEA  L   + D+ I P+++T++++I   C    V  +  +L  + + G  P+  ++T+L
Sbjct: 448 EEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTL 507

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +  Y   G  ++  +L   M  +   P VV Y+ +I GLC    ++E+V +   M     
Sbjct: 508 MNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGL 567

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  TY+ +I  F KA ++  A ++ + M+ +   P    Y  ++  LC+      A  
Sbjct: 568 APDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADR 627

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++  +   N     V + T IK  C  G    A+K+  QM                    
Sbjct: 628 VLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM-------------------- 667

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
                         +EK G +++I  Y+ +++ +C+  ++ EA      ML +G   D  
Sbjct: 668 --------------VEK-GFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQE 712

Query: 482 TFNIIIYAYCKQGKVNNAIQLL 503
            F +++ A+ + G V++  +LL
Sbjct: 713 IFEMMLNAFHRAGHVHSVFELL 734



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/415 (21%), Positives = 189/415 (45%), Gaps = 7/415 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ ++D    LL +M+   +      +  +I+   + G  +QA++++  +    
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    ++ IL  L  +   S     + ++    + P+V  YNI++    K   V+ A 
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG------SGVSVYNALING 174
           +L   + +K   P  V++ +++   CK  +V EAR L           S V+ Y  L+N 
Sbjct: 452 RLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT-YTTLMNA 510

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+E  I +   LL EM  + I+P V+TY+ +I  LC    +E S+ +L  M  +G  P+
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPD 570

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++ ++++ +       +A +L + M+     P    Y+ LI GLC  G +++A  V  
Sbjct: 571 QITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLV 630

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +++ +       Y+ +I      G+   A +++++M+  G   ++  Y+ ++  LC+  
Sbjct: 631 SLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRC 690

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           + ++A      M  +   P+   F   +      G V    +LL  M ++  L +
Sbjct: 691 LINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 146/494 (29%), Positives = 260/494 (52%), Gaps = 6/494 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F ++      P +  +N +L AL+    +  +  IY  M+  G+  +V+T  IL
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRF 161
           +  LC  + V   + +L ++   G  P  +++ T+++ +C  G++ EA E     ++  +
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  +  ++NGLCK  K   A   + +MV+   +P V++YS II SLC    V  ++ 
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +   M   G +P + ++ SL+ G    G+  +AS L+  M+     P+VV +S L+  LC
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA+SV  +M + +  P++ TYS+LI G  K+     +S + N M+S    P+VV
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            ++  V V C+  M  +A S+I  M      PN VT+N+ + G C   ++D A K+ D M
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM 445

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               C P++ +YN L+ G  +  R+ EA +L  E+   G+  N +T+ T++ G+C+AG  
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A +L  KM   G   D IT++ ++  +CK G ++ A+ L + ++   +  P+ +    
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK-KSQLKPNHVICKI 564

Query: 522 LLWGICNSGGMQEA 535
           LL G+C +G +++A
Sbjct: 565 LLGGMCKAGKLEDA 578



 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 248/474 (52%), Gaps = 5/474 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  + ++M+  GVSCS      +IN    + L      +  +I + G KP++  +N +
Sbjct: 121 DSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTL 180

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L  E R          +   G +P V+T+ +++  LCK  +   A   + +M    C
Sbjct: 181 INGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDC 240

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFW 186
            P+ VSY+ I+ S+CK   V EA +L     S G+S     YN+LI G+C   + ++A  
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  EM++  + P+V+T+S ++ +LC  G V  +L + G+M      P+I +++SL+ G  
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                 E+S L N M+     P+VV +S  +   C  G + EA S+   M E    PNV 
Sbjct: 361 KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY++L+DG+     +  A ++++ M++ GC+P+V++Y  ++K  C++    +A  L ++M
Sbjct: 421 TYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           + +   PN++T  T I GLC  GR   A +L  +M  + C P++ TY+ LL G  +   +
Sbjct: 481 SHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHL 540

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            EA  L   ++K  ++ N V    +L G+C+AG + +A +L   + IE  + D 
Sbjct: 541 DEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 205/397 (51%), Gaps = 1/397 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           ++ +N L+  L +    +    +  +M   G+  +V T + +I+ LC +  V     +LG
Sbjct: 104 ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLG 163

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           ++F  G  P+I +F +L+ G  + GR  EA +  + ++  G+ P V  ++ +++GLC  G
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIG 223

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
               A+    +M E  C P V +YS +ID   K   +  A  ++  M S G SP VV Y 
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  +C +  + QA  L ++M   N  P+ VTF+  +  LC  G V  A+ +  +M Q 
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI 343

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P+I TY+ L+ G+ + +  KE+  L+ E+    I+ ++VT++  +   C+ GMV EA
Sbjct: 344 AMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEA 403

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             ++  M+  G + + +T+N ++  YC   +++ A ++ D +   G   PD++SY  L+ 
Sbjct: 404 QSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG-CAPDVLSYNILIK 462

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G C S  + EA     +M ++G+ PN  T   L+  L
Sbjct: 463 GYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGL 499



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 206/400 (51%), Gaps = 13/400 (3%)

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A     +MV     P +  ++ ++++L  + + ++ + I  +M   G + ++++ T L
Sbjct: 86  DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +              +  ++ + GF P+++ ++TLI+GLC  G + EA+     +     
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P V T++ +++G  K G    A     +M+   C P VV+Y+ ++  LC+N + ++A  
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L   M      P  VT+N+ I G+C  G+   A  L  +M ++   P++ T++ L+D L 
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   V EA  +  ++ +  ++ +IVTY++++HGVC++ +  E+  LL +ML    + D +
Sbjct: 326 KEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVV 385

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           TF+I +  +CK+G V+ A  +++ +   G   P++++Y SL+ G C    M EA      
Sbjct: 386 TFSIWVDVFCKKGMVSEAQSIINLMIERG-LRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 542 MLNEGICPNFATWNVLV------------RSLFSNLGHLG 569
           M+N+G  P+  ++N+L+            + LF  + H G
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 41/317 (12%)

Query: 281 CSNGSM---DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           C  GS    D+A++   QM   +  P +T ++ L+    +  +      I+ +M   G S
Sbjct: 77  CKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            +V   T ++  LC  ++     S++ K+      P+ +TFNT I GLC  GR+  AM+ 
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQ 196

Query: 398 LD-----------------------------------QMKQYECLPNITTYNELLDGLLR 422
           LD                                   +M + +C P + +Y+ ++D L +
Sbjct: 197 LDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCK 256

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              V EA +L   +   GI   +VTYN++++G+C +G   +A  L  +ML    K D +T
Sbjct: 257 NRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVT 316

Query: 483 FNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           F+I++ A CK+G V  A+ +  + I+   E  PDI++Y+SL+ G+C S   +E+   L +
Sbjct: 317 FSILVDALCKEGVVLEALSVFGKMIQIAME--PDIVTYSSLIHGVCKSSLWKESSTLLNE 374

Query: 542 MLNEGICPNFATWNVLV 558
           ML+  I P+  T+++ V
Sbjct: 375 MLSRNIRPDVVTFSIWV 391



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 5/199 (2%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K  +   Q ++  M   G+  +   + S+++ Y      ++A K+F  +   G  P V 
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN ++       R      ++  M   G+ PN  T+  L+  LC+  R   A +L  +M
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKI 181
           G+ GC PD ++Y+T++S  CK G ++EA  L       +      +   L+ G+CK  K+
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575

Query: 182 EEAFWLLCEMVDRGIDPNV 200
           E+A  L   +    + P+V
Sbjct: 576 EDAKELFSSLSIEELQPDV 594


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 154/504 (30%), Positives = 253/504 (50%), Gaps = 31/504 (6%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I +   +   + A + F  ++E G+ P ++ +N +L   L  N+   +  +Y+ M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R  ++  V+T+NI++  LCK  ++  A   +  M N G  P+ V+Y             
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTY------------- 274

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                            N +I+G C   ++E A  +L  M +RG++P+  TY ++IS +C
Sbjct: 275 -----------------NTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMC 317

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G +E + GIL +M   G  P   ++ +L+ GY   G   +A    + M+R   LP V 
Sbjct: 318 KGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVS 377

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ LIH L   G MDEA  +   M ++   P+  TY+ LI+G+ + GN   A  + + M
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           IS G  P +V YT ++ VL + N    A  L EK+  E   P+ + FN  I G C  G +
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A  LL +M +   +P+  TYN L+ G  R  +V+EA EL+ E+++ GI+ + ++YNT+
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G  + G + +AF +  +ML  G     +T+N +I   CK  + + A +LL  +   G 
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG- 616

Query: 512 WNPDIISYTSLLWGICNSGGMQEA 535
             PD  +Y SL+ GI       EA
Sbjct: 617 ITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 265/507 (52%), Gaps = 10/507 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNM--KRDGM-EPNVFTYNILLKALCKNNRVDGA 119
           P+ K   H+L   + E+R + +  ++  +   RD +   +   +++L++A C+  R D A
Sbjct: 127 PSPKSTLHLLKQTI-ESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDA 185

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE-----ARELAMRFGSGVSVYNALING 174
           ++    M  KG  P   ++  ++S   KL Q E      A    ++  S V  +N +IN 
Sbjct: 186 FECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINV 245

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCKE K+++A   +  M + G+ PNV+TY+T+I   C  G VE +  +L  M  RG  P+
Sbjct: 246 LCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPD 305

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            +++ SL+ G   GG+  EAS +  +M   G LP  V Y+TLI G C+ G + +A     
Sbjct: 306 SYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M   +  P V+TY+ LI      G +  A  +   M  +G  P+ + Y  ++   C+  
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCG 425

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A +L ++M  +   P  VT+ + I  L    R+  A  L +++ +    P++  +N
Sbjct: 426 NAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFN 485

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG      +  AF L+ E++K  I  + VTYNT++ G CR G V EA +LL +M   
Sbjct: 486 ALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRR 545

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G + D I++N +I  Y K+G +N+A  + D +   G +NP +++Y +L+ G+C +     
Sbjct: 546 GIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG-FNPTLLTYNALIQGLCKNQQGDL 604

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           A   L++M+++GI P+ +T+  L+  +
Sbjct: 605 AEELLKEMVSKGITPDDSTYFSLIEGI 631



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 227/451 (50%), Gaps = 44/451 (9%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           MK +GV      F ++++ + ++   E    ++  +    +K TV  +N +++ L  E +
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                    +M+  G++PNV TYN ++   C   RV+GA  +L  M N+G  PD+ +Y +
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311

Query: 141 IVSSICKLGQVEEAR-----------------------------ELAMRFG--------- 162
           ++S +CK G++EEA                              +L   FG         
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371

Query: 163 --SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
               VS YN LI+ L  E K++EA  ++ +M D GI P+ ITY+ +I+  C  GN + + 
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH--EASDLWNRMIREGFLPNVVAYSTLIH 278
            +  +M  +G  P + ++TSL+  Y+L  R     A DL+ ++IREG  P+++ ++ LI 
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLI--YVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C+NG++D A ++  +M++ +  P+  TY+ L+ G  + G +  A ++   M   G  P
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           + ++Y  ++    +    + A ++ ++M      P  +T+N  I+GLC   + D A +LL
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELL 609

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            +M      P+ +TY  L++G+ +V+   EA
Sbjct: 610 KEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 234/525 (44%), Gaps = 57/525 (10%)

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG------CAPDAV--SYTTIVSSICK 147
           + PN+    I    L  + + D A + +  +G KG      C   AV     +  S++  
Sbjct: 76  LAPNLSPSLISATLLSLHKKSDLALQFVTHIGFKGLDIKTKCLAVAVVSRSPSPKSTLHL 135

Query: 148 LGQVEEAR---------ELAM---RFGSGVS-VYNALINGLCKEHKIEEAFWLLCEMVDR 194
           L Q  E+R         ELA+   R G+  S V++ LI   C+  + ++AF     M ++
Sbjct: 136 LKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEK 195

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P + T++ ++S    +   ET   +  +MF       +++F  ++      G+  +A
Sbjct: 196 GVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKA 255

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSN------------------------------- 283
            D    M   G  PNVV Y+T+IHG CS                                
Sbjct: 256 KDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISG 315

Query: 284 ----GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G ++EA  +  +M+E    P   TY+ LIDG+   G+L+ A    + M+     P 
Sbjct: 316 MCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPT 375

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  Y  ++  L       +A  +I+ M      P+++T+N  I G C CG    A  L D
Sbjct: 376 VSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHD 435

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M      P + TY  L+  L + NR+K A +L  +I + G   +++ +N ++ G C  G
Sbjct: 436 EMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANG 495

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  AF LL +M       D +T+N ++   C++GKV  A +LL  ++  G   PD ISY
Sbjct: 496 NLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG-IRPDHISY 554

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +L+ G    G + +AF    +ML+ G  P   T+N L++ L  N
Sbjct: 555 NTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKN 599



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 163/315 (51%), Gaps = 5/315 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++MK  G+  +   + ++I+ Y   G   +A      +    + PTV  YN ++ AL 
Sbjct: 328 ILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALF 387

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +    + +  +M   G+ P+  TYNIL+   C+      A+ L  EM +KG  P  V
Sbjct: 388 LEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLV 447

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++  + K  +++ A +L    +R G+   +  +NALI+G C    ++ AF LL EM
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             R I P+ +TY+T++   C  G VE +  +L +M  RG  P+  S+ +L+ GY   G  
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A  + + M+  GF P ++ Y+ LI GLC N   D A  +  +M      P+ +TY +L
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 312 IDGFAKAGNLLGASQ 326
           I+G  K  +   AS 
Sbjct: 628 IEGIGKVDDSSEASD 642



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 131/256 (51%), Gaps = 8/256 (3%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           G+  E DG   +++ M   G+      +  +IN Y R G A++A  +   +   G++PT+
Sbjct: 390 GKMDEADG---MIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTL 446

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y  ++  L   NR    + ++  + R+G  P++  +N L+   C N  +D A+ LL E
Sbjct: 447 VTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKE 506

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHK 180
           M  +   PD V+Y T++   C+ G+VEEAREL       G+      YN LI+G  K   
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I +AF +  EM+  G +P ++TY+ +I  LC     + +  +L +M  +G  P+  ++ S
Sbjct: 567 INDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFS 626

Query: 241 LLKGYLLGGRTHEASD 256
           L++G      + EASD
Sbjct: 627 LIEGIGKVDDSSEASD 642



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 91/219 (41%), Gaps = 33/219 (15%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  +     L +++  EG S    +F ++I+ +   G  ++A  +   + +  
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN ++     E +      +   MKR G+ P+  +YN L+    K   ++ A+
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  EM + G  P  ++Y  ++  +CK  Q + A E                        
Sbjct: 572 TIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE------------------------ 607

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                 LL EMV +GI P+  TY ++I     +G V+ S
Sbjct: 608 ------LLKEMVSKGITPDDSTYFSLIEG---IGKVDDS 637


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 273/524 (52%), Gaps = 8/524 (1%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           +R +G +  A+ +FY +   G  P++K  N  L +L+  N F     ++  M  +G  P+
Sbjct: 162 FRNLGFS-CAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMS-EGACPD 219

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
           VF++  ++ ALCK  +++ A +L ++M   G +P+ V+Y  I++ +C+ G+++ A EL  
Sbjct: 220 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 279

Query: 160 RFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +         +  Y ALINGL K +  ++   +L EM+  G +PNV+ ++ +I   C +G
Sbjct: 280 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMG 339

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           N+E +L I   M  +   P   +  SL++G+    +   A +    ++  G   +     
Sbjct: 340 NIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY 399

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +++H LC       A   +  M   +  P+    + L+ G  K G  L A+++W R++  
Sbjct: 400 SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEK 459

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G   + V    ++  LC      +A  ++++M     P + +T+N  I G C  G+V+  
Sbjct: 460 GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGC 519

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            +L ++M +    P+I TYN LL GL  V ++ +A +L  E +  G+  NI TY  ++ G
Sbjct: 520 FRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEG 579

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+A  + +   L  ++L +  +L++I +NIII A+C+ G V  A+QLL+ ++  G   P
Sbjct: 580 YCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL-P 638

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +  +Y+SL+ G+CN G +++A   + +M  EG  PN   +  L+
Sbjct: 639 NCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 682



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 265/548 (48%), Gaps = 6/548 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+  G+S +   +  +IN   + G  + A ++  ++   G++P +K Y  +++ L+
Sbjct: 242 LFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLI 301

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N F  +N I   M   G  PNV  +N L+   CK   ++GA K+   M +K   P +V
Sbjct: 302 KLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 361

Query: 137 SYTTIVSSICKLGQVEEARE-LAMRFGSGVSVYN----ALINGLCKEHKIEEAFWLLCEM 191
           +  +++   CK  Q+E A   L     SG+S++     ++++ LCK+ +   AF     M
Sbjct: 362 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMM 421

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R   P+ +  + ++  LC  G    +  +  ++  +G   +  +  +L+ G    G+ 
Sbjct: 422 LSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKL 481

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EAS +   M+  G   + + Y+ LI G C+ G ++    +  +M +    P++ TY+ L
Sbjct: 482 PEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFL 541

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G    G L  A ++W+   ++G   N+  Y  M++  C+ N      +L  ++  +  
Sbjct: 542 LRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKM 601

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             N++ +N  IK  C  G V  A++LL+ MK    LPN  TY+ L+ G+  +  V++A  
Sbjct: 602 ELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKH 661

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ E+ K G   N+V Y  ++ G C+ G +  A     +M+      +  T+ ++I  YC
Sbjct: 662 LIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYC 721

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G +  A  LL +++  G   PD+++Y  L  G C +  M  AF    +M  EG+  + 
Sbjct: 722 KLGNMEKANNLLIKMKESG-IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDE 780

Query: 552 ATWNVLVR 559
            T+  LV 
Sbjct: 781 ITYTTLVH 788



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 255/541 (47%), Gaps = 43/541 (7%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           EG       F +VIN+  + G  E A+++F ++ + G+ P V  YN I++ L    R   
Sbjct: 214 EGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDN 273

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
              +   M   G++PN+ TY  L+  L K N  D    +L EM   G  P+ V +  ++ 
Sbjct: 274 AFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLID 333

Query: 144 SICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
             CK+G +E A ++     S       V++Y +L+ G CK  +IE A   L E++  G+ 
Sbjct: 334 GYCKMGNIEGALKIKDVMISKNITPTSVTLY-SLMQGFCKSDQIEHAENALEEILSSGLS 392

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            +     +++  LC      ++      M  R   P+    T L+ G    G+  EA++L
Sbjct: 393 IHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL 452

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           W R++ +G   + V  + LIHGLC  G + EA  +  +M E   P +  TY+ALI GF  
Sbjct: 453 WFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCN 512

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G + G  ++   M   G  P++                                    T
Sbjct: 513 EGKVEGCFRLREEMTKRGIQPDI-----------------------------------YT 537

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  ++GLC  G++D A+KL D+ K    + NI TY  +++G  + NR+++   L  E+ 
Sbjct: 538 YNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELL 597

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              ++LN + YN I+   C+ G V  A QLL  M  +G   +  T++ +I+  C  G V 
Sbjct: 598 SKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVE 657

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A  L+D +R  G + P+++ YT+L+ G C  G M  A     +M++  I PN  T+ V+
Sbjct: 658 DAKHLIDEMRKEG-FVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVM 716

Query: 558 V 558
           +
Sbjct: 717 I 717



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 236/485 (48%), Gaps = 5/485 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D V ++L +M   G + +  VF ++I+ Y ++G  E ALK+   +    + PT      
Sbjct: 306 FDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYS 365

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++      ++          +   G+  +      ++  LCK  R   A++    M ++ 
Sbjct: 366 LMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRN 425

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVS--VYNALINGLCKEHKIEEAF 185
             P  +  T +V  +CK G+  EA EL  R    GS  S    NALI+GLC   K+ EA 
Sbjct: 426 FRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEAS 485

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            ++ EM++RG+  + ITY+ +I   C+ G VE    +  +M  RG  P+I+++  LL+G 
Sbjct: 486 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 545

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+  +A  LW+     G + N+  Y  ++ G C    +++  ++  ++       N 
Sbjct: 546 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 605

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             Y+ +I    + GN+  A Q+   M S G  PN   Y+ ++  +C   +   A  LI++
Sbjct: 606 IVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDE 665

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  E   PN V +   I G C  G++D A     +M  +   PN  TY  ++DG  ++  
Sbjct: 666 MRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGN 725

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +++A  L+ ++++ GI  ++VTYN + +G C+A  +  AF++  +M  EG  +D IT+  
Sbjct: 726 MEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTT 785

Query: 486 IIYAY 490
           +++ +
Sbjct: 786 LVHGW 790



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 6/121 (4%)

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
            V+ F LL +   +GT     T N  + +  K  +     ++   +  G    PD+ S+T
Sbjct: 170 AVDVFYLLAR---KGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGA--CPDVFSFT 224

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +++  +C  G M+ A     KM   GI PN  T+N ++  L  N G L   + L + M  
Sbjct: 225 NVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQN-GRLDNAFELKEKMTV 283

Query: 581 K 581
           K
Sbjct: 284 K 284


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 164/524 (31%), Positives = 256/524 (48%), Gaps = 7/524 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L  F  +   G+ P VK  NH+L AL    R+  I  ++  M + G+EP++ TYN LL +
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 110 LCKNNRVDGAYKLLVEMGNK--GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV 165
             K  R D    LL EM  +  GC P+ V+Y  +++ + + G +EEA EL   MR     
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 166 S--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           S   YN LI GL     +++ + L  EM + GI P V+TY+ +I  L   G VE +    
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P++ ++ SLL GY   G   EA  L+  + R G  P V+ Y+  I G C  
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRL 393

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++EA  +  +M E  C PNV TY+ L+ G     +L  A + ++ M+S G  P+  AY
Sbjct: 394 GDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAY 453

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +          +A  L E +  E    +TVT+N  I GLC  G +  A +L  +M  
Sbjct: 454 NTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 513

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY  L+        ++EA ++   +   G+  + VT+  I+H  CR G +  
Sbjct: 514 NGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYS 573

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A+    KML EG + + IT+N++I+A C+ G+   A      +   G    +  +YT L+
Sbjct: 574 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG-LVANKYTYTLLI 632

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            G C  G  ++A  +  +M   GI P++ T   LV+    ++ H
Sbjct: 633 DGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGFDGHVHH 676



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 239/528 (45%), Gaps = 43/528 (8%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            ++M   GV+        V+ + R     +    +   + + G++P++  YN +LD+ L 
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 78  ENRFSMINPIYSNMKRDGME--PNVFTYNILLKALCKNNRVDGA---------------- 119
           E R   +  +   M+  G    PN  TYN+++  L +   ++ A                
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 276

Query: 120 ------------------YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----EL 157
                             Y L +EM N+G  P  V+Y  ++  + + G VE A+    E+
Sbjct: 277 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 336

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            AM     V  YN+L+NG CK   ++EA  L  ++   G+ P V+TY+  I   C +G++
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDL 396

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +  +  +M  +GC PN+ ++T L+KG L       A + ++ M+ +G  P+  AY+T 
Sbjct: 397 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTR 456

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I      G +  A+ +   +       +  TY+ LI G  K GNL  A ++  +M+SNG 
Sbjct: 457 ICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 516

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ + YTC++   C+  +  +A  +   M  +   P+ VTF   I   C  G +  A  
Sbjct: 517 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 576

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
              +M +    PN  TYN L+  L R+ R + A     E+ + G+  N  TY  ++ G C
Sbjct: 577 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNC 636

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           + G   +A +   +M   G   D +T   ++  +   G V++ I+ LD
Sbjct: 637 KVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF--DGHVHHTIEYLD 682


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/549 (29%), Positives = 269/549 (48%), Gaps = 33/549 (6%)

Query: 60  GLKPTVKIYNHILDALL-------AEN-RFSMINP------------IYSNMKRDG---M 96
           G K  V  Y+ +L+ L+       AE  R SMI              ++  M  DG    
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKF 155

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +P +  YN +L +L K   +D    + +E+ N   +P+  ++  +V+  CK+G V EA  
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAEL 215

Query: 157 LAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
            A +            Y +LI G C+   ++ A+ +   M  +G   N ++Y+ +I  LC
Sbjct: 216 YASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLC 275

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           + G +  +L +   M    C P + ++T L+      GR  EA +L+N M  +G  PNV 
Sbjct: 276 EAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVH 335

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ LI GLC    MDEA  +  +M E    P+V TY+ALIDG+ K G +  A +I + M
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM 395

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            SN C PN   Y  ++  LC+    H+A +L+ KM      P+ +T+N+ I G C    +
Sbjct: 396 ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDL 455

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A +LL  M +   +P+  TY+  +D L +  RV+EA  L   ++  G++ N V Y  +
Sbjct: 456 ESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTAL 515

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G C+ G +  A+ LL +ML +    ++ T+N++I   CK+ K+  A  L+ ++   G 
Sbjct: 516 IDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG- 574

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
             P +++YT L+  +   G    A      M++ G  P+  T+   + + FS     G +
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQ----GML 630

Query: 572 YILDDIMAN 580
             +DD++A 
Sbjct: 631 EEVDDVIAK 639



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 253/469 (53%), Gaps = 8/469 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G + NV +Y+ +L  L +   +  A K+ + M    C+ + V +  ++    K+    
Sbjct: 94  RPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF--VLEVFRKMNADG 151

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           E      +F   +  YN ++  L K   I+E   +  E+++  I PN+ T++ +++  C 
Sbjct: 152 E-----FKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +GNV  +     ++   G +P+  ++TSL+ G+        A +++  M ++G   N V+
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LIHGLC  G ++EA+ +   M E++C P V TY+ LI   + +G  + A  ++N M 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC PNV  YT ++  LC+ N   +A  ++ +M+ +   P+ VT+N  I G C  G +D
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A ++LD M+   C PN  TYNEL+ GL +  +V +A  L+ ++ +  +  +++TYN+++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           HG C+   +  A++LL  M   G   D  T+++ I   CK+G+V  A  L D ++  G  
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             ++I YT+L+ G C  G +  A+  L++MLN+   PN  T+NVL+  L
Sbjct: 507 ANEVI-YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 158/586 (26%), Positives = 277/586 (47%), Gaps = 35/586 (5%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +   M  +G   +E  + ++I+     G   +ALK+F  + E    PTV+ Y  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ AL    R      +++ MK  G EPNV TY +L+  LCK N++D A K+L EM  KG
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
             P  V+Y  ++   CK G +++A E+     +   G     YN LI GLCK+ K+ +A 
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL +M++R + P++ITY+++I   C V ++E++  +L  M   G  P+  +++  +   
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  EA  L++ +  +G   N V Y+ LI G C  G +D A S+  +M  ++C PN 
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNS 544

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LI+G  K   +  AS +  +M++ G  P VV YT ++  + ++  F  A  +   
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+  T+  F+      G ++    ++ +M +   LP++ TY  L+DG  R+  
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE---------------------- 463
              AF+ +  +   G + ++   + ++  +     + E                      
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVW 724

Query: 464 -------AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
                  A +L  KM+  G  +D   +  +I  +C+Q ++  A  L+  ++  G  +P  
Sbjct: 725 KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG-MSPSE 783

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             Y SLL   C  G   EA   +  M+  G+ P   ++ +LV  L+
Sbjct: 784 DIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLY 829



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 162/585 (27%), Positives = 269/585 (45%), Gaps = 79/585 (13%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIR---EFGLKPTVKIYNHILDAL---------- 75
           +E + IS+I S   +      L++F ++    EF  KPT++ YN IL +L          
Sbjct: 120 AEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMK 179

Query: 76  -----LAENRFS--------MIN-----------PIY-SNMKRDGMEPNVFTYNILLKAL 110
                L  N+ S        M+N            +Y S + + G+ P+ FTY  L+   
Sbjct: 180 TVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH 239

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF--------- 161
           C+N  VD AY++ + M  KGC  + VSYT ++  +C+ G++ EA +L             
Sbjct: 240 CRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTV 299

Query: 162 -----------GSG--------------------VSVYNALINGLCKEHKIEEAFWLLCE 190
                      GSG                    V  Y  LI+GLCKE+K++EA  +L E
Sbjct: 300 RTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G+ P+V+TY+ +I   C  G ++ +  IL  M    C PN  ++  L+ G     +
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            H+A  L N+M+     P+++ Y++LIHG C    ++ A  +   M EN   P+  TYS 
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
            ID   K G +  A  +++ + + G   N V YT ++   C+      A+SL+E+M  + 
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C PN+ T+N  I+GLC   ++  A  L+ +M      P + TY  L+  +L+      A 
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G Q ++ TY   LH     GM+ E   ++ KM  EG   D +T+ ++I  Y
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGY 659

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + G  + A   L  +   G   P +   + L+  + +   M+E 
Sbjct: 660 ARLGLTHRAFDFLKCMVDTG-CKPSLYIVSILIKNLSHENRMKET 703



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 261/531 (49%), Gaps = 12/531 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++D  + +L +M  +G+  S   + ++I+ Y + G+ + A ++   +    
Sbjct: 340 LIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNS 399

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + YN ++  L  + +      + + M    + P++ TYN L+   CK N ++ AY
Sbjct: 400 CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAY 459

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +LL  M   G  PD  +Y+  + ++CK G+VEEA  L     A    +   +Y ALI+G 
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  KI+ A+ LL  M++    PN  TY+ +I  LC    ++ +  ++ +M   G  P +
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTV 579

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T L+   L  G    A  ++N M+  G+ P+V  Y+  +H   S G ++E   V  +
Sbjct: 580 VTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAK 639

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P++ TY+ LIDG+A+ G    A      M+  GC P++   + ++K L   N 
Sbjct: 640 MNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR 699

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +  S I   +  N   N+V      K L      + A+KL ++M ++ C  +++ Y  
Sbjct: 700 MKETRSEIGIDSVSNV--NSVDIADVWKTL----EYEIALKLFEKMVEHGCTIDVSIYGA 753

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  +  R++EA  LV  +++ G+  +   YN++L   C+ G+  EA +L+  M+  G
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
                 ++ +++     +G    A  +   +   G +N D +++  L+ G+
Sbjct: 814 LLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCG-YNYDEVAWKVLIDGL 863



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 156/356 (43%), Gaps = 59/356 (16%)

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP------------------- 302
           +R GF  NV +YS++++ L     +  A  +   M ++ C                    
Sbjct: 93  LRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGE 152

Query: 303 ----PNVTTYSALI-----------------------------------DGFAKAGNLLG 323
               P +  Y+ ++                                   +G+ K GN++ 
Sbjct: 153 FKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVE 212

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A    ++++  G  P+   YT ++   C+N     A+ +   M  + C  N V++   I 
Sbjct: 213 AELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIH 272

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  GR++ A+KL   M +  C P + TY  L+  L    R  EA  L  E+++ G + 
Sbjct: 273 GLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEP 332

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+ TY  ++ G+C+   + EA ++L +M  +G     +T+N +I  YCK+G +++A ++L
Sbjct: 333 NVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL 392

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           D +       P+  +Y  L+ G+C    + +A   L KML   + P+  T+N L+ 
Sbjct: 393 DLMESNS-CGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIH 447



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 155/358 (43%), Gaps = 34/358 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE L ++ ++     L+ +M   GV  +   +  +I    + G  + ALK+F  +   G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  Y   L A  ++     ++ + + M  +G+ P++ TY +L+    +      A+
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR------------------------- 155
             L  M + GC P     + ++ ++    +++E R                         
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY 729

Query: 156 ELAMRFGS---------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E+A++             VS+Y ALI G C++ ++EEA  L+  M +RG+ P+   Y+++
Sbjct: 730 EIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 789

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C +G    ++ ++  M   G  P + S+  L+ G  + G   +A  +++ ++  G+
Sbjct: 790 LDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGY 849

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
             + VA+  LI GL     +DE   +   MEE           A +   A A +  GA
Sbjct: 850 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGA 907


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 239/455 (52%), Gaps = 5/455 (1%)

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS-GVS 166
           C++     +  LL  M  KG  PD +  T ++     L  V +A    E+  +FG   V 
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNALING CK ++I++A  +L  M  +   P+ +TY+ +I SLC  G ++ +L +L Q+
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
               C P + ++T L++  +L G   EA  L + M+  G  P++  Y+T+I G+C  G +
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMV 275

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A  +   +E   C P+V +Y+ L+      G      ++  +M S  C PNVV Y+ +
Sbjct: 276 DRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 335

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC++    +A +L++ M  +   P+  +++  I   C  GR+D A++ L+ M    C
Sbjct: 336 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 395

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           LP+I  YN +L  L +  +  +A E+  ++ + G   N  +YNT+   +  +G  + A  
Sbjct: 396 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 455

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           ++ +M+  G   D IT+N +I   C++G V+ A +LL  +R   E++P +++Y  +L G 
Sbjct: 456 MILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMR-SCEFHPSVVTYNIVLLGF 514

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +  +++A   L  M+  G  PN  T+ VL+  +
Sbjct: 515 CKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGI 549



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 209/407 (51%), Gaps = 5/407 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN + ++   + A ++  R+R     P    YN ++ +L +  +  +   +   +  D
Sbjct: 159 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSD 218

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             +P V TY IL++A      VD A KLL EM ++G  PD  +Y TI+  +CK G V+ A
Sbjct: 219 NCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 278

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E+            V  YN L+  L  + K EE   L+ +M     DPNV+TYS +I++
Sbjct: 279 FEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 338

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G +E ++ +L  M  +G  P+ +S+  L+  +   GR   A +    MI +G LP+
Sbjct: 339 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 398

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC NG  D+A+ +  ++ E  C PN ++Y+ +      +G+ + A  +  
Sbjct: 399 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 458

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+SNG  P+ + Y  M+  LC+  M  +A  L+  M      P+ VT+N  + G C   
Sbjct: 459 EMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 518

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           R++ A+ +LD M    C PN TTY  L++G+       EA EL  ++
Sbjct: 519 RIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 234/462 (50%), Gaps = 6/462 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL+ M  +G +    +   +I  +  +    +A+++   + +FG +P V  YN +++  
Sbjct: 106 HLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGF 164

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              NR      +   M+     P+  TYNI++ +LC   ++D A K+L ++ +  C P  
Sbjct: 165 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTV 224

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++YT ++ +    G V+EA +L     +      +  YN +I G+CKE  ++ AF ++  
Sbjct: 225 ITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRN 284

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +  +G +P+VI+Y+ ++ +L + G  E    ++ +MF   C+PN+ +++ L+      G+
Sbjct: 285 LELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 344

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L   M  +G  P+  +Y  LI   C  G +D A+     M  + C P++  Y+ 
Sbjct: 345 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 404

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++    K G    A +I+ ++   GCSPN  +Y  M   L  +    +A  +I +M    
Sbjct: 405 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNG 464

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+N+ I  LC  G VD A +LL  M+  E  P++ TYN +L G  + +R+++A 
Sbjct: 465 IDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 524

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +++  +   G + N  TY  ++ G+  AG   EA +L   ++
Sbjct: 525 DVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 205/377 (54%), Gaps = 6/377 (1%)

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I    C  GN   SL +L  M  +G NP++   T L+KG+       +A  +   + + G
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V AY+ LI+G C    +D+A  V  +M      P+  TY+ +I      G L  A 
Sbjct: 151 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ ++++S+ C P V+ YT +++         +A  L+++M      P+  T+NT I+G+
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--EKCGIQL 443
           C  G VD A +++  ++   C P++ +YN LL  LL   + +E  +L+T++  EKC    
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC--DP 327

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+VTY+ ++  +CR G + EA  LL  M  +G   DA +++ +I A+C++G+++ AI+ L
Sbjct: 328 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 387

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + +   G   PDI++Y ++L  +C +G   +A     K+   G  PN +++N +  +L+S
Sbjct: 388 ETMISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446

Query: 564 NLGHLGPVYILDDIMAN 580
           +   +  ++++ ++++N
Sbjct: 447 SGDKIRALHMILEMVSN 463



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 199/397 (50%), Gaps = 5/397 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    +L +M+ +  S     +  +I S    G  + ALK+  ++     +PTV  Y 
Sbjct: 169 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYT 228

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A + E        +   M   G++P++FTYN +++ +CK   VD A++++  +  K
Sbjct: 229 ILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELK 288

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC PD +SY  ++ ++   G+ EE  +L  +  S      V  Y+ LI  LC++ KIEEA
Sbjct: 289 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 348

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M ++G+ P+  +Y  +I++ C  G ++ ++  L  M   GC P+I ++ ++L  
Sbjct: 349 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 408

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A +++ ++   G  PN  +Y+T+   L S+G    A+ +  +M  N   P+
Sbjct: 409 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPD 468

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+++I    + G +  A ++   M S    P+VV Y  ++   C+ +    A  +++
Sbjct: 469 EITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLD 528

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            M    C PN  T+   I+G+   G    AM+L + +
Sbjct: 529 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 184/353 (52%), Gaps = 5/353 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L  + ++D    +L Q+  +    +   +  +I +    G  ++ALK+   +   G
Sbjct: 195 MIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN I+  +  E        +  N++  G EP+V +YNILL+AL    + +   
Sbjct: 255 LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGE 314

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           KL+ +M ++ C P+ V+Y+ +++++C+ G++EEA   L +    G++     Y+ LI   
Sbjct: 315 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E +++ A   L  M+  G  P+++ Y+T++++LC  G  + +L I G++   GC+PN 
Sbjct: 375 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 434

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ ++       G    A  +   M+  G  P+ + Y+++I  LC  G +D+A  +   
Sbjct: 435 SSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVD 494

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           M      P+V TY+ ++ GF KA  +  A  + + M+ NGC PN   YT +++
Sbjct: 495 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 22/268 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M +   EKC+ + V Y +                 +I +  R G  E+A+ +   ++E G
Sbjct: 317 MTKMFSEKCDPNVVTYSI-----------------LITTLCRDGKIEEAMNLLKLMKEKG 359

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y+ ++ A   E R  +       M  DG  P++  YN +L  LCKN + D A 
Sbjct: 360 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 419

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           ++  ++G  GC+P++ SY T+ S++   G    A  + +   S G+      YN++I+ L
Sbjct: 420 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCL 479

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E  +++AF LL +M      P+V+TY+ ++   C    +E ++ +L  M   GC PN 
Sbjct: 480 CREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNE 539

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            ++T L++G    G   EA +L N ++R
Sbjct: 540 TTYTVLIEGIGFAGYRAEAMELANDLVR 567


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 266/557 (47%), Gaps = 63/557 (11%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++  +I+      L E+A+    R+R     P V  Y  +L   L + +      I S M
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KL 148
             +G  P+   +N L+ A C++     AYKLL +MG+ GC P  V Y  ++  IC   KL
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 149 --------------------------------------GQVEEA----RELAMR-FGSGV 165
                                                 G+ E+A    RE+  + F    
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           S Y+ +I  LC   K++ AF L  EM    + P+V TY+ +I S C VG ++ +     +
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   GC PN+ ++T+L+  YL   +   A++L+  M+ EG +PNVV Y+ LI G C +G 
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 286 MDEAVSVSYQMEENS-CP---------------PNVTTYSALIDGFAKAGNLLGASQIWN 329
           +++A  +  +M  N+  P               PN+ TY AL+DG  KA  +  A  + +
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M   GC PN + Y  ++   C+     +A  +  KM+     PN  T+++ I  L    
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A+K+L +M +  C PN+  Y E++DGL +V +  EA+ L++ +E+ G   N+VTY 
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G  +AG V +  +L+ +M  +G   + +T+ ++I   C  G +++A QLLD ++  
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK-Q 839

Query: 510 GEWNPDIISYTSLLWGI 526
             W   +  Y  ++ G 
Sbjct: 840 TYWPKHMAGYRKVIEGF 856



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 240/511 (46%), Gaps = 25/511 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M  +G       +  VI         + A  +F  ++   + P V  Y  ++D+  
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M RDG  PNV TY  L+ A  K  ++  A +L   M ++GC P+ V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV---------------------YNALINGL 175
           +YT ++   CK GQ+E+A ++  R      +                     Y AL++GL
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK HK++EA  LL  M   G +PN I Y  +I   C VG ++ +  +  +M  RG  PN+
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++++SL+       R   A  + +RM+     PNV+ Y+ +I GLC  G  DEA  +   
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE  C PNV TY+A+IDGF KAG +    ++  +M + GC+PN V Y  ++   C   +
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              AH L+++M     P +   +   I+G         ++ LLD++ +   +P I  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRI 884

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           L+D   +  R++ A EL  E+  C      +   Y++++  +  A  V +AF+L   M+ 
Sbjct: 885 LIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIK 944

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            G   +   F  ++    +  +   A+QL D
Sbjct: 945 RGGIPELSIFFYLVKGLIRINRWEEALQLSD 975



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 255/544 (46%), Gaps = 31/544 (5%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G   +AL +  +  EF L     IY  ++  L   + F       S M+     PNV 
Sbjct: 279 KAGRWREALALIEK-EEFKLDTV--IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TY ILL    +  ++    ++L  M  +GC P    + +++ + C+ G    A +L  + 
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 162 GS-----GVSVYNALINGLCKEHKI------EEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           G      G  VYN LI G+C   K+      E A     EM+D  +  N +  S +   L
Sbjct: 396 GDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCL 455

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  E +  I+ +M  +G  P+  +++ ++       +   A  L+  M     +P+V
Sbjct: 456 CGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDV 515

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ LI   C  G + +A     +M  + C PNV TY+ALI  + KA  +  A++++  
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEM 575

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCP---------------PN 374
           M+S GC PNVV YT ++   C++    +A  +  +M    + P               PN
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+   + GLC   +V  A  LLD M    C PN   Y+ L+DG  +V ++ EA  + T
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++ + G   N+ TY++++  + +   +  A ++L +ML      + I +  +I   CK G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K + A +L+  +   G  +P++++YT+++ G   +G + +    +++M  +G  PNF T+
Sbjct: 756 KTDEAYRLMSMMEEKG-CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 555 NVLV 558
            VL+
Sbjct: 815 RVLI 818



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 263/581 (45%), Gaps = 70/581 (12%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R GL   AL+   R+++ G KP+   YN ++   L  +R      ++  M   G   + +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           T    +  LCK  R   A  L+ +   K    D V YT ++S +C+    EEA +   R 
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 162 GSGV----------------------------------------SVYNALINGLCKEHKI 181
            S                                           ++N+LI+  C+    
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE-TSLGIL-------GQMFVRGCNP 233
             A+ LL +M D G  P  + Y+ +I  +C  GN +  SL +L       G+M       
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N  + ++L +     G+  +A  +   M+ +GF+P+   YS +I  LC+   +D A  + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+ N   P+V TY+ LID F K G L  A + ++ M+ +GC+PNVV YT ++    + 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL------ 407
                A+ L E M  E C PN VT+   I G C  G+++ A ++  +M+    +      
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 408 ----------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
                     PNI TY  L+DGL + ++VKEA +L+  +   G + N + Y+ ++ G C+
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + EA  +  KM   G   +  T++ +I    K  +++ A+++L R+       P++I
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS-CAPNVI 742

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            YT ++ G+C  G   EA+  +  M  +G  PN  T+  ++
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 181/396 (45%), Gaps = 10/396 (2%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LI   C+      A   L  + D G  P+ +TY+ ++    +   ++T+  +  +M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G N + ++    +      GR  EA  L  +   E F  + V Y+ +I GLC     +E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEE 317

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+    +M  +SC PNV TY  L+ G  +   L    +I + MI+ GC P+   +  ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR------VDWAMKLLDQMK 402
             C++  +  A+ L++KM    C P  V +N  I G+CG  +      ++ A K   +M 
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               + N    + L   L    + ++A+ ++ E+   G   +  TY+ ++  +C A  V 
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            AF L  +M       D  T+ I+I ++CK G +  A +  D +   G   P++++YT+L
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG-CAPNVVTYTAL 556

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +     +  M  A    + ML+EG  PN  T+  L+
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALI 592



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 40/367 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   + LL  M VEG   +  V+ ++I+ + +VG  ++A  +F ++ E G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ ++D L  + R  +   + S M  +   PNV  Y  ++  LCK  + D AY
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAY 761

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L+  M  KGC P+ V+YT ++    K G+V++  EL  + G+                 
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA----------------- 804

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                        +G  PN +TY  +I+  C  G ++ +  +L +M       ++  +  
Sbjct: 805 -------------KGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 241 LLKGYLLGGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +++G+    R    S  L + +     +P + AY  LI   C  G ++ A+ +  +M  +
Sbjct: 852 VIEGF---NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--S 906

Query: 300 SC----PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           SC      +   YS+LI+  + A  +  A +++  MI  G  P +  +  +VK L + N 
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966

Query: 356 FHQAHSL 362
           + +A  L
Sbjct: 967 WEEALQL 973


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/563 (28%), Positives = 274/563 (48%), Gaps = 53/563 (9%)

Query: 46  AEQALKM-FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG---MEPNVF 101
            + A+ M F R+ E G  P V  YN ++  L  E +      +  +M  DG     PNV 
Sbjct: 145 TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVV 204

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMR 160
           +Y+ ++    K   VD AY L  EM  +G  PD V+Y++++  +CK   + +A   L   
Sbjct: 205 SYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHM 264

Query: 161 FGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           F  GV      YN +I G C   ++EEA  LL +M   G+ P+V+TY  +I   C +G  
Sbjct: 265 FDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRC 324

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +   M  +G  PN   +  LL GY   G   +  DL + MIR+G      A++ L
Sbjct: 325 AEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 384

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I     +G++D+A++   +M +N   P+V +YS +I    K G +  A   +N+M+S G 
Sbjct: 385 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGL 444

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE--------------------------- 369
           SPN++++T ++  LC    + +    +E++AFE                           
Sbjct: 445 SPNIISFTSLIHGLCSIGEWKK----VEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 500

Query: 370 ------------NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
                          PN V++NT I G C  G++D ++K  D+M      P+  TYN LL
Sbjct: 501 EAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G  +  RV++A  L  E+ +  ++   +T N ILHG+ +AG +V A +L  KM+  GT+
Sbjct: 561 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQ 620

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           L   T+N ++   C+   V+ A+++ + +R   E+  D+ ++  ++  +   G + EA  
Sbjct: 621 LRIETYNTVLGGLCENSCVDEALRMFEDLR-SKEFELDVWTFNIVINALLKVGRIDEAKS 679

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
               M+  G  P+  T++++++S
Sbjct: 680 LFSAMVLRGPVPHVITYSLMIKS 702



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 233/470 (49%), Gaps = 10/470 (2%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           T N L+K LC   R D A  ++   M   G  PD  SY  ++  +C   + +EA EL + 
Sbjct: 131 TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLH 190

Query: 161 FGSG--------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             +         V  Y+ +I+G  KE ++++A++L  EM+ +G  P+V+TYS++I  LC 
Sbjct: 191 MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              +  +  IL  MF +G  PN  ++  +++GY   G+  EA  L  +M   G  P+VV 
Sbjct: 251 AQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVT 310

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y  LI   C  G   EA SV   M      PN T Y  L+ G+A  G L+    + + MI
Sbjct: 311 YILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMI 370

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G      A+  ++    ++    +A +   +M      P+ V+++T I  LC  GRV+
Sbjct: 371 RDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVE 430

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+   +QM      PNI ++  L+ GL  +   K+  EL  E+   GI  + +  NTI+
Sbjct: 431 DAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIM 490

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C+ G VVEA      ++  G K + +++N +I  YC  GK++ +I+  DR+   G  
Sbjct: 491 DNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIG-L 549

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            PD  +Y +LL G   +G +++A    ++M  + +     T N+++  LF
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLF 599



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 256/549 (46%), Gaps = 21/549 (3%)

Query: 36  VINSYRRVGLA-EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-------MINPI 87
           ++N +R   L  E AL +F  +       +V  +N +L  +   +  S       +   +
Sbjct: 19  ILNRHRSGSLGREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSL 78

Query: 88  YSNMKRDG---MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           ++ M R G   M  N +   IL++  C   R+D A+         G     V+   ++  
Sbjct: 79  FNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKG 138

Query: 145 ICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG--- 195
           +C   + ++A ++  R      +   V  YNALI GLC E K +EA  LL  M   G   
Sbjct: 139 LCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYN 198

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             PNV++YSTII      G V+ +  +  +M  +G  P++ +++SL+ G       ++A 
Sbjct: 199 CSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAE 258

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            +   M  +G +PN   Y+ +I G CS G ++EAV +  +M  +   P+V TY  LI  +
Sbjct: 259 AILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYY 318

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G    A  +++ M+  G  PN   Y  ++              L++ M  +  P   
Sbjct: 319 CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEH 378

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
             FN  I      G VD AM    +M+Q    P++ +Y+ ++  L ++ RV++A     +
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G+  NI+++ +++HG+C  G   +  +L  +M+  G   DAI  N I+   CK+G+
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V  A    D +   G   P+++SY +L+ G C  G M E+     +M++ G+ P+  T+N
Sbjct: 499 VVEAQDFFDMVIHIG-VKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYN 557

Query: 556 VLVRSLFSN 564
            L+   F N
Sbjct: 558 ALLNGYFKN 566



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 272/594 (45%), Gaps = 43/594 (7%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           EK   + ++ LL      G +CS  V  + ++I+ + + G  ++A  +F  +   G  P 
Sbjct: 178 EKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPD 237

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  Y+ ++D L      +    I  +M   G+ PN  TYNI+++  C   +++ A +LL 
Sbjct: 238 VVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLK 297

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS------------GVSVYN 169
           +M   G  PD V+Y  ++   CK+G+  EAR +    +R G             G +   
Sbjct: 298 KMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 357

Query: 170 ALI-----------NGLCKEHK--------------IEEAFWLLCEMVDRGIDPNVITYS 204
           ALI           +G+  EH+              +++A     EM   G+ P+V++YS
Sbjct: 358 ALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYS 417

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I  LC +G VE ++    QM   G +PNI SFTSL+ G    G   +  +L   MI  
Sbjct: 418 TVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR 477

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+ +  +T++  LC  G + EA      +      PNV +Y+ LIDG+   G +  +
Sbjct: 478 GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDES 537

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            + ++RM+S G  P+   Y  ++    +N     A +L  +M  ++     +T N  + G
Sbjct: 538 IKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHG 597

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   GR+  A +L  +M        I TYN +L GL   + V EA  +  ++     +L+
Sbjct: 598 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 657

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           + T+N +++ + + G + EA  L   M++ G     IT++++I +  ++G +  +  L  
Sbjct: 658 VWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFL 717

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +   G    D      ++  +   G ++ A  YL K+  +      +T  +L+
Sbjct: 718 SMEKNG-CAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLI 770



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 173/367 (47%), Gaps = 12/367 (3%)

Query: 9   CEIDGVQ---YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C+I  V+   Y   QM  EG+S +   F S+I+    +G  ++  ++ + +   G+ P  
Sbjct: 424 CKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDA 483

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
              N I+D L  E R       +  +   G++PNV +YN L+   C   ++D + K    
Sbjct: 484 IFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDR 543

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL---AMRFGSGVSVYNALINGLCKE 178
           M + G  PD+ +Y  +++   K G+VE+A    RE+    ++F +  S  N +++GL + 
Sbjct: 544 MVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITS--NIILHGLFQA 601

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +I  A  L  +MVDRG    + TY+T++  LC+   V+ +L +   +  +    ++ +F
Sbjct: 602 GRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTF 661

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++   L  GR  EA  L++ M+  G +P+V+ YS +I      G ++E+  +   ME+
Sbjct: 662 NIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEK 721

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           N C  +    + +I    + G++  A     ++     S        ++ ++ +     +
Sbjct: 722 NGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSEKKYQKE 781

Query: 359 AHSLIEK 365
              L EK
Sbjct: 782 VKFLPEK 788



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE-------AFELVTEIEKCGI 441
           GR D A+ L D++       ++  +N +L  + R +           A  L   + + G+
Sbjct: 29  GRED-ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGV 87

Query: 442 QLNIVTYNTILHGV-----CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
             N++  N  + G+     C  G +  AF      L  G ++  +T N +I   C   + 
Sbjct: 88  --NMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRT 145

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG---ICPNFAT 553
           ++A+ ++ R      + PD+ SY +L+ G+C     QEA   L  M  +G     PN  +
Sbjct: 146 DDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVS 205

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIM 578
           ++ ++   F   G +   Y L D M
Sbjct: 206 YSTIIDGFFKE-GEVDKAYFLFDEM 229


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 159/588 (27%), Positives = 277/588 (47%), Gaps = 80/588 (13%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG--MEPNVFTYNIL 106
           A   F  +   G  P++K  N +++AL    +  +   ++  M RDG  + P+V+TY ++
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM-RDGNAVAPDVYTYTVM 222

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--------- 157
           +KALC+   +D A+ +L E+   G  P  V+Y  ++ ++C+ G+VEEA +L         
Sbjct: 223 IKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRL 282

Query: 158 ----------------AMRFGS-----------GVS----VYNALINGLCKEHKIEEAFW 186
                             RFG            G++    +YN LI   C+E    EA  
Sbjct: 283 RPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALR 342

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  EMV +GI   V+TY+ I  +LC  G +E +  IL +M + G   +   F S++  +L
Sbjct: 343 LFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHL 402

Query: 247 LG-GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            G GR      L   M+     PN    +  I  LC  G  +EA  + + +       N+
Sbjct: 403 RGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNI 462

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T +ALI G  +  N+  A+++   M+ +G   + + Y  M++  C+ +   +A  L + 
Sbjct: 463 ATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDD 522

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+  TFNTF++  C  G+V+  + LLDQMK     P+I TY  ++DG  +   
Sbjct: 523 MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKD 582

Query: 426 VKEAFELVTEIEKCGIQLNIV-----------------------------------TYNT 450
           V +A + + E+ K G++ N V                                   TYN+
Sbjct: 583 VHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNS 642

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++ +C AG+V EA ++  + +++  +L  I + III  +CK GK++ A+     +    
Sbjct: 643 LMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYR- 701

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +  P+ ++YT+L++  C  G  +EAF    +M++ GI P+  ++N L+
Sbjct: 702 DIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLI 749



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 223/453 (49%), Gaps = 9/453 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D V   LQ+M+  G++ +E ++  +I  + R G   +AL++F  +   G+K TV  YN
Sbjct: 304 EVDAV---LQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYN 360

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK-ALCKNNRVDGAYKLLVEMGN 128
            I  AL  E        I   M   GM  +   +N ++   L    R+D   +L+ EM  
Sbjct: 361 LIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVA 420

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEE 183
           +   P+    T  +  +CK G+ EEA E     L    G  ++  NALI+GLC+ + ++E
Sbjct: 421 RFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKE 480

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  +L  MVD G++ + ITY+ +I   C    +E ++ +   M  RG  P++ +F + L+
Sbjct: 481 ATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLR 540

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            Y   G+  +   L ++M  EG  P++V Y T+I G C    + +A     ++ +N   P
Sbjct: 541 AYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRP 600

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N   Y+ALI G+ + G++  A  + + M  NG  P  + Y  ++  +C   +  +A  + 
Sbjct: 601 NAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIF 660

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +   +N     + +   I+G C  G++D A+    +M   +  PN  TY  L+    + 
Sbjct: 661 AQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKC 720

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
              +EAF+L  E+   GI  + V+YNT++ G C
Sbjct: 721 GNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 241/513 (46%), Gaps = 13/513 (2%)

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG----AYKLLVEMGNKGCAPD 134
           +R    NP+              T ++L++A C N+   G    A    +E+  +G +P 
Sbjct: 121 SRLLFFNPLSVAAAAIADSDCTATADLLVRA-CLNSPAPGSLSCAADAFLELSTRGASPS 179

Query: 135 AVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS----VYNALINGLCKEHKIEEAFWLL 188
             +   +V ++   GQ++ AR++   MR G+ V+     Y  +I  LC+  +I+ AF +L
Sbjct: 180 IKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVML 239

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E+   GI P V+TY+ ++ +LC  G VE +  + G+M      P+I +F  L+ G   G
Sbjct: 240 AELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARG 299

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  E   +   M   G  PN V Y+ LI   C  G   EA+ +  +M        V TY
Sbjct: 300 QRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTY 359

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK-VLCQNNMFHQAHSLIEKMA 367
           + +     K G +  A QI + M+  G + +   +  +V   L           LI +M 
Sbjct: 360 NLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMV 419

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                PN       I+ LC  G+ + A ++   +       NI T N L+ GL + N +K
Sbjct: 420 ARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMK 479

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA +++  +   G++ + +TYN ++   C+A  + EA QL   M+  G K D  TFN  +
Sbjct: 480 EATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFL 539

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            AYC  GKV + + LLD+++  G   PDI++Y +++ G C +  + +A  YL +++  G+
Sbjct: 540 RAYCNLGKVEDILHLLDQMKSEG-LKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGL 598

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            PN   +N L+     N      + +LD +  N
Sbjct: 599 RPNAVIYNALIGGYGRNGSISDAIGVLDTMKHN 631



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/546 (23%), Positives = 252/546 (46%), Gaps = 49/546 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L    EID    +L +++  G+  +   +  ++++  R G  E+A ++  R+ E  
Sbjct: 222 MIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGR 281

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P++  +  +++ L    RF  ++ +   M+  G+ PN   YN L+   C+      A 
Sbjct: 282 LRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEAL 341

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------------------------- 154
           +L  EM +KG     V+Y  I  ++CK G++E A                          
Sbjct: 342 RLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401

Query: 155 --------------RELAMRF-GSGVSVYNALINGLCKEHKIEEA--FWLLCEMVDRGID 197
                         RE+  RF     +V  A I  LCK  K EEA   W L  ++ +G+ 
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFL--VLGKGLG 459

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            N+ T + +I  LC   N++ +  +L  M   G   +  ++  +++      +  EA  L
Sbjct: 460 VNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQL 519

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + MI+ GF P++  ++T +   C+ G +++ + +  QM+     P++ TY  +IDG+ K
Sbjct: 520 RDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCK 579

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A ++  A++    +I NG  PN V Y  ++    +N     A  +++ M      P  +T
Sbjct: 580 AKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPIT 639

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQ--MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           +N+ +  +C  G V+ A ++  Q  +K  E    +  Y  ++ G  ++ ++ EA     E
Sbjct: 640 YNSLMYWMCHAGLVEEAKEIFAQCILKNIEL--GVIGYTIIIQGFCKIGKIDEAVMYFKE 697

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +    I+ N +TY T+++  C+ G   EAF+L  +M+  G   D +++N +I   C+   
Sbjct: 698 MHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDS 757

Query: 496 VNNAIQ 501
           ++  ++
Sbjct: 758 LDKIVE 763


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 263/510 (51%), Gaps = 9/510 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L PT   Y  ++D     +R  +    +  + R G+  ++   N LLK  C+  R D A 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 121 KLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALI 172
            +L+    + GC PD  SY+ ++ S+C  G+  +A +L      G       V  Y  +I
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +   KE  + +A  L  EMV RGI P+++TYS+++ +LC    +  +   L QM  +G  
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  ++ +L+ GY   G+  EA  ++  M R   LP+VV  + L+  LC  G + EA  V
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      P+V +Y  +++G+A  G L+  + +++ M+ +G +P++  ++ ++K    
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  +  +M      P+ VT+ T I  LC  G++D AM+  +QM      P+   
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+ G      + +A EL+ EI   G++L+IV +++I++ +C+ G +++A  +    +
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTV 530

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   DA+ +++++  YC  GK+  A+++ D +   G   P+++ Y +L+ G C  G +
Sbjct: 531 NVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG-IEPNVVVYGTLVNGYCKIGRI 589

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            E     ++ML +GI P+   +N+++  LF
Sbjct: 590 DEGLSLFREMLQKGIKPSTILYNIIIDGLF 619



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 247/517 (47%), Gaps = 8/517 (1%)

Query: 44  GLAEQALKMFYRIREFGL--KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           G + QA  +   + E G    P V  Y  ++D    E   +    ++  M + G+ P++ 
Sbjct: 200 GKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLV 259

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
           TY+ ++ ALCK   +  A   L +M NKG  PD  +Y  ++      GQ +EA  +   M
Sbjct: 260 TYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM 319

Query: 160 RFGS---GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           R  S    V   N L+  LCK  KI+EA  +   M  +G +P+V +Y  +++     G +
Sbjct: 320 RRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCL 379

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +   M   G  P+I++F+ L+K Y   G   +A  ++N M   G  P+VV Y+T+
Sbjct: 380 VDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTV 439

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC  G MD+A+    QM +    P+   Y  LI GF   G+LL A ++   +++NG 
Sbjct: 440 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGM 499

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             ++V ++ ++  LC+      A ++ +        P+ V ++  + G C  G+++ A++
Sbjct: 500 RLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALR 559

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + D M      PN+  Y  L++G  ++ R+ E   L  E+ + GI+ + + YN I+ G+ 
Sbjct: 560 VFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 619

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            AG  V A     +M   G  ++  T+NI++  + K    + AI L   +R       DI
Sbjct: 620 VAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELR-AMNVKIDI 678

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           I+  +++ G+  +  ++EA      +   G+ P   T
Sbjct: 679 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 198/390 (50%), Gaps = 4/390 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R + P   TY+ ++         E +L   GQ+   G   +I     LLKG+    RT E
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168

Query: 254 ASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A D L +R    G +P+V +YS L+  LC  G   +A  +   M E    C P+V  Y+ 
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +ID F K G++  A  ++  M+  G  P++V Y+ +V  LC+     +A + + +M  + 
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+  T+N  I G    G+   A+++  +M+++  LP++ T N L+  L +  ++KEA 
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEAR 348

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++   +   G   ++ +Y  +L+G    G +V+   L   ML +G   D  TF+++I AY
Sbjct: 349 DVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAY 408

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G ++ A+ + + +R  G   PD+++YT+++  +C  G M +A     +M+++G+ P+
Sbjct: 409 ANCGMLDKAMIIFNEMRDHG-VKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              ++ L++   ++   L    ++ +IM N
Sbjct: 468 KYAYHCLIQGFCTHGSLLKAKELILEIMNN 497



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 233/501 (46%), Gaps = 42/501 (8%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL+ M   G  CS  V  + +VI+ + + G   +A  +F  + + G+ P +  Y+ ++ A
Sbjct: 208 LLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHA 267

Query: 75  LLAENRF--------SMINP---------------------------IYSNMKRDGMEPN 99
           L               M+N                            ++  M+R  + P+
Sbjct: 268 LCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPD 327

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-A 158
           V T N+L+ +LCK  ++  A  +   M  KG  PD  SY  +++     G + +  +L  
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387

Query: 159 MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +  G G++     ++ LI        +++A  +  EM D G+ P+V+TY+T+I++LC +G
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ ++    QM  +G  P+ +++  L++G+   G   +A +L   ++  G   ++V +S
Sbjct: 448 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFS 507

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           ++I+ LC  G + +A ++          P+   YS L+DG+   G +  A ++++ M+S 
Sbjct: 508 SIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 567

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PNVV Y  +V   C+     +  SL  +M  +   P+T+ +N  I GL   GR   A
Sbjct: 568 GIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPA 627

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
                +M +     N  TYN +L G  +     EA  L  E+    ++++I+T NT++ G
Sbjct: 628 KVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 687

Query: 455 VCRAGMVVEAFQLLGKMLIEG 475
           + +   V EA  L   +   G
Sbjct: 688 MFQTRRVEEAKDLFASISRSG 708



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 208/438 (47%), Gaps = 40/438 (9%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           +  L+QM  +GV      + ++I  Y   G  ++A+++F  +R   + P V   N ++ +
Sbjct: 278 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGS 337

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILL--------------------------- 107
           L    +      ++  M   G  P+VF+Y I+L                           
Sbjct: 338 LCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 397

Query: 108 --------KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LA 158
                   KA      +D A  +  EM + G  PD V+YTT+++++C++G++++A E   
Sbjct: 398 IYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFN 457

Query: 159 MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                GV+     Y+ LI G C    + +A  L+ E+++ G+  +++ +S+II++LC +G
Sbjct: 458 QMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLG 517

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +  +  I       G +P+   ++ L+ GY L G+  +A  +++ M+  G  PNVV Y 
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG 577

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TL++G C  G +DE +S+  +M +    P+   Y+ +IDG   AG  + A   ++ M  +
Sbjct: 578 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES 637

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G + N   Y  +++   +N  F +A  L +++   N   + +T NT I G+    RV+ A
Sbjct: 638 GIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 697

Query: 395 MKLLDQMKQYECLPNITT 412
             L   + +   +P + T
Sbjct: 698 KDLFASISRSGLVPCVVT 715



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 5/267 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       QM  +GV+  +  +  +I  +   G   +A ++   I   G++  +  ++
Sbjct: 448 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFS 507

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I++ L    R      I+      G  P+   Y++L+   C   +++ A ++   M + 
Sbjct: 508 SIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 567

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y T+V+  CK+G+++E     RE+  +       +YN +I+GL    +   A
Sbjct: 568 GIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPA 627

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM + GI  N  TY+ ++         + ++ +  ++       +I +  +++ G
Sbjct: 628 KVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 687

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVV 271
                R  EA DL+  + R G +P VV
Sbjct: 688 MFQTRRVEEAKDLFASISRSGLVPCVV 714


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 266/506 (52%), Gaps = 7/506 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PT+  YN +++      R  +  P++  + R G+ P+VF+YN L+    K   VD A+ L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCK 177
             +M  +G  P+ V+Y+++++ +CK  ++++A R L    G+GV      YN LI+G   
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
               +E+  +  EM    + P+V   ++ +++LC  G ++ +  I   M ++G  P++ S
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +LL GY   G      +L+N M+ EG +P+   ++TLI+     G MD+++ +   M 
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    P++ T+S +I  F + G L  A + +N MI  G  P+   Y+C+++  C      
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLV 486

Query: 358 QAHSLIEKMAFENCPPNTVTFNT-FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           +A  LI  M  +  PP  + F T  I  LC  GRV     ++D +      PN+ T+N L
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSL 546

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DG   V  +KEA  L+  +E  G++ +I TYNT++ G C+ G + +A  L   ML +  
Sbjct: 547 VDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRV 606

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            L ++++NII++   +  +   A ++   +   G     I +Y ++L G+C +    EA 
Sbjct: 607 TLTSVSYNIILHGLFQARRTIVAKEMFHEMIESG-MAVSIHTYATVLGGLCRNNCTDEAN 665

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLF 562
           + L+K+ +  +  +  T+N+++R++F
Sbjct: 666 MLLEKLFSMNVKFDILTFNIVIRAMF 691



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 256/532 (48%), Gaps = 7/532 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN YRR    +  L +F R+   GL P V  YN ++D    E      + ++  M+  G
Sbjct: 195 LINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQG 254

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV TY+ L+  LCK   +D A ++L +M   G  P+ ++Y  ++      G  +E+ 
Sbjct: 255 IMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESV 314

Query: 156 ELAMRFGSGVSVY-----NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            +     S + V      N+ +  LCK  +I+EA  +   MV +G  P+VI+Y  ++   
Sbjct: 315 RVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGY 374

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
              G +     +   M   G  P+ H F +L+  Y   G   ++  ++  M ++G  P++
Sbjct: 375 ATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDI 434

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + +ST+I   C  G +D+A+     M +   PP+   YS LI G     +L+ A ++ + 
Sbjct: 435 ITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISD 494

Query: 331 MISNGCSPNVVA-YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           M+S G  P  +  +T ++  LC+     +   +++ +      PN +TFN+ + G C  G
Sbjct: 495 MLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG 554

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A+ LLD M+     P+I TYN L+DG  +  R+ +A  L  ++    + L  V+YN
Sbjct: 555 NMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYN 614

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ILHG+ +A   + A ++  +M+  G  +   T+  ++   C+    + A  LL+++   
Sbjct: 615 IILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL-FS 673

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                DI+++  ++  +   G  QEA      +   G+ P   T+ V++ +L
Sbjct: 674 MNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 725



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/544 (25%), Positives = 261/544 (47%), Gaps = 41/544 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  E+D  + +L+QM   GV  +   +  +I+ Y   G+ ++++++F  +    
Sbjct: 265 LINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSL 324

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY----------------- 103
           L P V   N  + AL    R      I+ +M   G +P+V +Y                 
Sbjct: 325 LVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMD 384

Query: 104 ------------------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                             N L+ A  +   +D +  +  +M  +G  PD ++++T++S+ 
Sbjct: 385 NLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAF 444

Query: 146 CKLGQVEEARE-LAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C+LG++++A E       +GV    +VY+ LI G C    + +A  L+ +M+ +GI P  
Sbjct: 445 CRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPC 504

Query: 201 ITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           I + ++II++LC  G V     ++  +   G  PN+ +F SL+ GY L G   EA  L +
Sbjct: 505 IKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLD 564

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M   G  P++  Y+TL+ G C +G +D+A+++   M          +Y+ ++ G  +A 
Sbjct: 565 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 624

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             + A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +TFN
Sbjct: 625 RTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFN 684

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I+ +   GR   A +L   +  Y  +P I TY  ++  L++    ++A  L + +EK 
Sbjct: 685 IVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKS 744

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
               +    N I+  +   G V +A   L K+  +G   +A T +++IY +   GK    
Sbjct: 745 SCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREY 804

Query: 500 IQLL 503
           I+LL
Sbjct: 805 IKLL 808



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/569 (23%), Positives = 266/569 (46%), Gaps = 8/569 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ E+D    L  +M+ +G+  +   + S+IN   +    ++A ++  ++   G
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++        +     ++  M    + P+V   N  + ALCK+ R+  A 
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGV----SVYNALINGL 175
            +   M  KG  PD +SY  ++      G +     L  +    GV     V+N LIN  
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   ++++  +  +M  +G++P++IT+ST+IS+ C +G ++ ++     M   G  P+ 
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 469

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA-YSTLIHGLCSNGSMDEAVSVSY 294
             ++ L++G        +A +L + M+ +G  P  +  ++++I+ LC  G + E   V  
Sbjct: 470 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVD 529

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +      PN+ T+++L+DG+   GN+  A  + + M S G  P++  Y  +V   C++ 
Sbjct: 530 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 589

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A +L   M  +     +V++N  + GL    R   A ++  +M +     +I TY 
Sbjct: 590 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYA 649

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            +L GL R N   EA  L+ ++    ++ +I+T+N ++  + + G   EA +L   +   
Sbjct: 650 TVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTY 709

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G     +T+ ++I    K+    +A  L   +       PD      ++  + N G + +
Sbjct: 710 GLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSS-CTPDSRILNEIIRMLLNKGEVAK 768

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  YL K+  +GI P   T ++L+  LFS
Sbjct: 769 AGNYLSKIDKKGILPEATTTSLLI-YLFS 796



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 214/432 (49%), Gaps = 8/432 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I G+  L   M  EGV     VF ++IN+Y R+G+ +++L MF  + + G+ P +  ++ 
Sbjct: 380 IAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFST 439

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ A     R       +++M   G+ P+   Y+ L++  C    +  A +L+ +M +KG
Sbjct: 440 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 499

Query: 131 CAPDAVSY-TTIVSSICKLGQVEEARE---LAMRFGS--GVSVYNALINGLCKEHKIEEA 184
             P  + + T+I++++CK G+V E ++   L +  G    +  +N+L++G C    ++EA
Sbjct: 500 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 559

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M   G++P++ TY+T++   C  G ++ +L +   M  +       S+  +L G
Sbjct: 560 VGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHG 619

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                RT  A ++++ MI  G   ++  Y+T++ GLC N   DEA  +  ++   +   +
Sbjct: 620 LFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFD 679

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ +I    K G    A +++  + + G  P ++ Y  M+  L +   F  A +L  
Sbjct: 680 ILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFS 739

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M   +C P++   N  I+ L   G V  A   L ++ +   LP  TT   LL  L  VN
Sbjct: 740 SMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATT-TSLLIYLFSVN 798

Query: 425 -RVKEAFELVTE 435
            + +E  +L+ E
Sbjct: 799 GKYREYIKLLPE 810


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 265/557 (47%), Gaps = 63/557 (11%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++  +I+      L E+A+    R+R     P V  Y  +L   L + +      I S M
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KL 148
             +G  P+   +N L+ A C++     AYKLL +MG+ GC P  V Y  ++  IC   KL
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 149 --------------------------------------GQVEEA----RELAMR-FGSGV 165
                                                 G+ E+A    RE+  + F    
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           S Y+ +I  LC   K++ AF L  EM    + P+V TY+ +I S C VG ++ +     +
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   GC PN+ ++T+L+  YL   +   A++L+  M+ EG +PNVV Y+ LI G C +G 
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 286 MDEAVSVSYQMEENS----------------CPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +++A  +  +M  N+                  PN+ TY AL+DG  KA  +  A  + +
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M   GC PN + Y  ++   C+     +A  +  KM+     PN  T+++ I  L    
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A+K+L +M +  C PN+  Y E++DGL +V +  EA+ L++ +E+ G   N+VTY 
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G  +AG V +  +L+ +M  +G   + +T+ ++I   C  G +++A QLLD ++  
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK-Q 839

Query: 510 GEWNPDIISYTSLLWGI 526
             W   +  Y  ++ G 
Sbjct: 840 TYWPKHMAGYRKVIEGF 856



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 241/513 (46%), Gaps = 25/513 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M  +G       +  VI         + A  +F  ++   + P V  Y  ++D+  
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M RDG  PNV TY  L+ A  K  ++  A +L   M ++GC P+ V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV---------------------YNALINGL 175
           +YT ++   CK GQ+E+A ++  R      +                     Y AL++GL
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK HK++EA  LL  M   G +PN I Y  +I   C VG ++ +  +  +M  RG  PN+
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++++SL+       R   A  + +RM+     PNV+ Y+ +I GLC  G  DEA  +   
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE  C PNV TY+A+IDGF KAG +    ++  +M + GC+PN V Y  ++   C   +
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              AH L+++M     P +   +   I+G         ++ LLD++ +   +P I  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRI 884

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           L+D   +  R++ A EL  E+  C      +   Y++++  +  A  V +AF+L   M+ 
Sbjct: 885 LIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIK 944

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            G   +   F  ++    +  +   A+QL D I
Sbjct: 945 RGGIPELSIFFYLVKGLIRINRWEEALQLSDCI 977



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 255/544 (46%), Gaps = 31/544 (5%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G   +AL +  +  EF L     IY  ++  L   + F       S M+     PNV 
Sbjct: 279 KAGRWREALALIEK-EEFKLDTV--IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TY ILL    +  ++    ++L  M  +GC P    + +++ + C+ G    A +L  + 
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 162 GS-----GVSVYNALINGLCKEHKI------EEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           G      G  VYN LI G+C   K+      E A     EM+D  +  N +  S +   L
Sbjct: 396 GDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCL 455

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  E +  I+ +M  +G  P+  +++ ++       +   A  L+  M     +P+V
Sbjct: 456 CGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDV 515

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ LI   C  G + +A     +M  + C PNV TY+ALI  + KA  +  A++++  
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEM 575

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCP---------------PN 374
           M+S GC PNVV YT ++   C++    +A  +  +M    + P               PN
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+   + GLC   +V  A  LLD M    C PN   Y+ L+DG  +V ++ EA  + T
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++ + G   N+ TY++++  + +   +  A ++L +ML      + I +  +I   CK G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K + A +L+  +   G  +P++++YT+++ G   +G + +    +++M  +G  PNF T+
Sbjct: 756 KTDEAYRLMSMMEEKG-CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 555 NVLV 558
            VL+
Sbjct: 815 RVLI 818



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 150/579 (25%), Positives = 264/579 (45%), Gaps = 66/579 (11%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R GL   AL+   R+++ G KP+   YN ++   L  +R      ++  M   G   + +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           T    +  LCK  R   A  L+ +   K    D V YT ++S +C+    EEA +   R 
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 162 GSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            S      V  Y  L+ G  ++ ++     +L  M+  G  P+   ++++I + C  G+ 
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 217 ETSLGILGQMFVRGCNP-----NI---------------------HSFTSLLKGYLL--- 247
             +  +L +M   GC P     NI                      ++  +L  +++   
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNK 445

Query: 248 ------------GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                        G+  +A  +   M+ +GF+P+   YS +I  LC+   +D A  +  +
Sbjct: 446 VNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEE 505

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+ N   P+V TY+ LID F K G L  A + ++ M+ +GC+PNVV YT ++    +   
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL-------- 407
              A+ L E M  E C PN VT+   I G C  G+++ A ++  +M+    +        
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 408 --------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
                   PNI TY  L+DGL + ++VKEA +L+  +   G + N + Y+ ++ G C+ G
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA  +  KM   G   +  T++ +I    K  +++ A+++L R+       P++I Y
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS-CAPNVIIY 744

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           T ++ G+C  G   EA+  +  M  +G  PN  T+  ++
Sbjct: 745 TEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 182/396 (45%), Gaps = 10/396 (2%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LI   C+      A   L  + D G  P+ +TY+ ++    +   ++T+  +  +M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G N + ++    +      GR  EA  L   + +E F  + V Y+ +I GLC     +E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALAL---IEKEEFKLDTVIYTQMISGLCEASLFEE 317

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+    +M  +SC PNV TY  L+ G  +   L    +I + MI+ GC P+   +  ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR------VDWAMKLLDQMK 402
             C++  +  A+ L++KM    C P  V +N  I G+CG  +      ++ A K   +M 
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               + N    + L   L    + ++A+ ++ E+   G   +  TY+ ++  +C A  V 
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            AF L  +M       D  T+ I+I ++CK G +  A +  D +   G   P++++YT+L
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG-CAPNVVTYTAL 556

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +     +  M  A    + ML+EG  PN  T+  L+
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALI 592



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 40/367 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   + LL  M VEG   +  V+ ++I+ + +VG  ++A  +F ++ E G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ ++D L  + R  +   + S M  +   PNV  Y  ++  LCK  + D AY
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAY 761

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L+  M  KGC P+ V+YT ++    K G+V++  EL  + G+                 
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA----------------- 804

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                        +G  PN +TY  +I+  C  G ++ +  +L +M       ++  +  
Sbjct: 805 -------------KGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 241 LLKGYLLGGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +++G+    R    S  L + +     +P + AY  LI   C  G ++ A+ +  +M  +
Sbjct: 852 VIEGF---NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEM--S 906

Query: 300 SC----PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           SC      +   YS+LI+  + A  +  A +++  MI  G  P +  +  +VK L + N 
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966

Query: 356 FHQAHSL 362
           + +A  L
Sbjct: 967 WEEALQL 973


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 265/557 (47%), Gaps = 63/557 (11%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++  +I+      L E+A+    R+R     P V  Y  +L   L + +      I S M
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KL 148
             +G  P+   +N L+ A C++     AYKLL +MG+ GC P  V Y  ++  IC   KL
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 149 --------------------------------------GQVEEA----RELAMR-FGSGV 165
                                                 G+ E+A    RE+  + F    
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           S Y+ +I  LC   K++ AF L  EM    + P+V TY+ +I S C VG ++ +     +
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   GC PN+ ++T+L+  YL   +   A++L+  M+ EG +PNVV Y+ LI G C +G 
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 286 MDEAVSVSYQMEENS----------------CPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +++A  +  +M  N+                  PN+ TY AL+DG  KA  +  A  + +
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M   GC PN + Y  ++   C+     +A  +  KM+     PN  T+++ I  L    
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A+K+L +M +  C PN+  Y E++DGL +V +  EA+ L++ +E+ G   N+VTY 
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYT 780

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G  +AG V +  +L+ +M  +G   + +T+ ++I   C  G +++A QLLD ++  
Sbjct: 781 AMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMK-Q 839

Query: 510 GEWNPDIISYTSLLWGI 526
             W   +  Y  ++ G 
Sbjct: 840 TYWPKHMAGYRKVIEGF 856



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 228/482 (47%), Gaps = 25/482 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M  +G       +  VI         + A  +F  ++   + P V  Y  ++D+  
Sbjct: 467 IIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC 526

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M RDG  PNV TY  L+ A  K  ++  A +L   M ++GC P+ V
Sbjct: 527 KVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVV 586

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV---------------------YNALINGL 175
           +YT ++   CK GQ+E+A ++  R      +                     Y AL++GL
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK HK++EA  LL  M   G +PN I Y  +I   C VG ++ +  +  +M  RG  PN+
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++++SL+       R   A  + +RM+     PNV+ Y+ +I GLC  G  DEA  +   
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSM 766

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE  C PNV TY+A+IDGF KAG +    ++  +M + GC+PN V Y  ++   C   +
Sbjct: 767 MEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGL 826

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              AH L+++M     P +   +   I+G         ++ LLD++ +   +P I  Y  
Sbjct: 827 LDDAHQLLDEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRI 884

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           L+D   +  R++ A EL   +  C      +   Y++++  +  A  V +AF+L   M+ 
Sbjct: 885 LIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIK 944

Query: 474 EG 475
            G
Sbjct: 945 RG 946



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 145/544 (26%), Positives = 255/544 (46%), Gaps = 31/544 (5%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G   +AL +  +  EF L     IY  ++  L   + F       S M+     PNV 
Sbjct: 279 KAGRWREALALIEK-EEFKLDTV--IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TY ILL    +  ++    ++L  M  +GC P    + +++ + C+ G    A +L  + 
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 162 GS-----GVSVYNALINGLCKEHKI------EEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           G      G  VYN LI G+C   K+      E A     EM+D  +  N +  S +   L
Sbjct: 396 GDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCL 455

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  E +  I+ +M  +G  P+  +++ ++       +   A  L+  M     +P+V
Sbjct: 456 CGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDV 515

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ LI   C  G + +A     +M  + C PNV TY+ALI  + KA  +  A++++  
Sbjct: 516 FTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEM 575

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCP---------------PN 374
           M+S GC PNVV YT ++   C++    +A  +  +M    + P               PN
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+   + GLC   +V  A  LLD M    C PN   Y+ L+DG  +V ++ EA  + T
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++ + G   N+ TY++++  + +   +  A ++L +ML      + I +  +I   CK G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K + A +L+  +   G  +P++++YT+++ G   +G + +    +++M  +G  PNF T+
Sbjct: 756 KTDEAYRLMSMMEEKG-CHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTY 814

Query: 555 NVLV 558
            VL+
Sbjct: 815 RVLI 818



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 263/581 (45%), Gaps = 70/581 (12%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R GL   AL+   R+++ G KP+   YN ++   L  +R      ++  M   G   + +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           T    +  LCK  R   A  L+ +   K    D V YT ++S +C+    EEA +   R 
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEKEEFK---LDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 162 GSGV----------------------------------------SVYNALINGLCKEHKI 181
            S                                           ++N+LI+  C+    
Sbjct: 326 RSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDY 385

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE-TSLGIL-------GQMFVRGCNP 233
             A+ LL +M D G  P  + Y+ +I  +C  GN +  SL +L       G+M       
Sbjct: 386 SYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAEKAYGEMLDAHVVL 443

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N  + ++L +     G+  +A  +   M+ +GF+P+   YS +I  LC+   +D A  + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+ N   P+V TY+ LID F K G L  A + ++ M+ +GC+PNVV YT ++    + 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL------ 407
                A+ L E M  E C PN VT+   I G C  G+++ A ++  +M+    +      
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 408 ----------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
                     PNI TY  L+DGL + ++VKEA +L+  +   G + N + Y+ ++ G C+
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + EA  +  KM   G   +  T++ +I    K  +++ A+++L R+       P++I
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS-CAPNVI 742

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            YT ++ G+C  G   EA+  +  M  +G  PN  T+  ++
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 212/475 (44%), Gaps = 60/475 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L ++MK   V      +  +I+S+ +VGL +QA K F  +   G  P V  Y 
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ A L   + S  N ++  M  +G  PNV TY  L+   CK+ +++ A ++   M   
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 130 GCAPDA----------------VSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VY 168
              PD                  +Y  +V  +CK  +V+EAR+L       G      VY
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           +ALI+G CK  K++EA  +  +M +RG  PNV TYS++I  L     ++ +L +L +M  
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
             C PN+  +T ++ G    G+T EA  L + M  +G  PNVV Y+ +I G    G +D+
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM----------------- 331
            + +  QM    C PN  TY  LI+    AG L  A Q+ + M                 
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 332 ----------------ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
                             N   P + AY  ++   C+      A  L + M+  +C   +
Sbjct: 855 GFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMS--SCTSYS 912

Query: 376 VT----FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 +++ I+ L    +VD A +L   M +   +P ++ +  L+ GL+R+NR 
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRT 967



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 181/396 (45%), Gaps = 10/396 (2%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LI   C+      A   L  + D G  P+ +TY+ ++    +   ++T+  +  +M  
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G N + ++    +      GR  EA  L  +   E F  + V Y+ +I GLC     +E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEE 317

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+    +M  +SC PNV TY  L+ G  +   L    +I + MI+ GC P+   +  ++ 
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR------VDWAMKLLDQMK 402
             C++  +  A+ L++KM    C P  V +N  I G+CG  +      ++ A K   +M 
Sbjct: 378 AYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEML 437

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               + N    + L   L    + ++A+ ++ E+   G   +  TY+ ++  +C A  V 
Sbjct: 438 DAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD 497

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            AF L  +M       D  T+ I+I ++CK G +  A +  D +   G   P++++YT+L
Sbjct: 498 NAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDG-CAPNVVTYTAL 556

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +     +  M  A    + ML+EG  PN  T+  L+
Sbjct: 557 IHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALI 592



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 164/359 (45%), Gaps = 40/359 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   + LL  M VEG   +  V+ ++I+ + +VG  ++A  +F ++ E G
Sbjct: 642 LVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ ++D L  + R  +   + S M  +   PNV  Y  ++  LCK  + D AY
Sbjct: 702 YGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAY 761

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L+  M  KGC P+ V+YT ++    K G+V++  EL  + G+                 
Sbjct: 762 RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA----------------- 804

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                        +G  PN +TY  +I+  C  G ++ +  +L +M       ++  +  
Sbjct: 805 -------------KGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRK 851

Query: 241 LLKGYLLGGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +++G+    R    S  L + +     +P + AY  LI   C  G ++ A+ +   M  +
Sbjct: 852 VIEGF---NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXM--S 906

Query: 300 SC----PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           SC      +   YS+LI+  + A  +  A +++  MI  G  P +  +  +VK L + N
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/565 (29%), Positives = 274/565 (48%), Gaps = 45/565 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            + S  R  + E   K++  + + GL P    YN ++ A   +   ++ +  +  ++  G
Sbjct: 150 ALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESG 209

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           M+ + +T N LL   C+ + +  A  LL+ M   GC  +  SYT ++  + +   V EA 
Sbjct: 210 MQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREAL 269

Query: 156 ELA-MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L  M    G S+    Y  LI GLCKE +I +A  LL EM  RG+ P+V TY+ +I   
Sbjct: 270 VLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGY 329

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G ++ +LGI   M   GCNP+  ++ SL+ G L GG+  EA +L N  I  GF P V
Sbjct: 330 CKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYG-LCGGKLDEAEELLNGAIARGFTPTV 388

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + ++ LI+G C    +D+A+ V   M  ++C  ++  Y  LI+   K   L  A +  N 
Sbjct: 389 ITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 331 MISNGCSPNVVAYTCMVKVLC-----------------------------------QNNM 355
           M +NG +PNVV YT ++   C                                   Q+  
Sbjct: 449 MFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKK 508

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H+A +LI KM  +   P  + + T I+G C     D A +L + M++    P+   YN 
Sbjct: 509 LHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNV 568

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L D L +  R +EA+  +    + G+ L  VTY +++ G  +AG    A  L+ KM+ EG
Sbjct: 569 LTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            K D  T+++++ A CKQ K+N A+ +LD++   G    +I++YT ++  +   G    A
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV-KCNIVAYTIIISEMIKEGKHDHA 684

Query: 536 FIYLQKMLNEGICPNFATWNVLVRS 560
                +M++ G  P+  T+ V + S
Sbjct: 685 KSLFNEMISSGHKPSATTYTVFISS 709



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 160/632 (25%), Positives = 288/632 (45%), Gaps = 90/632 (14%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL  M + G   +E  +  +I          +AL + + + + G    + +Y  ++  L
Sbjct: 235 WLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGL 294

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E R      +   M   G+ P+V+TYN ++   CK+ R+  A  +   M   GC PD 
Sbjct: 295 CKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDD 354

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWL--- 187
            +Y +++  +C  G+++EA EL     A  F   V  +  LING CK  +I++A  +   
Sbjct: 355 WTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSN 413

Query: 188 --------------------------------LCEMVDRGIDPNVITYSTIISSLCDVGN 215
                                           L EM   G+ PNV+ Y++II   C VG 
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGM 473

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  +L +   M   GC+PN  ++ SL+ G +   + H+A  L  +M  +G  P V+AY+T
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTT 533

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPN------------------------------- 304
           LI G C     D A  +   ME+N   P+                               
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVL 593

Query: 305 -VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
              TY++L+DGF+KAGN   A+ +  +M++ GC  ++  Y+ +++ LC+    ++A S++
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSIL 653

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M       N V +   I  +   G+ D A  L ++M      P+ TTY   +    ++
Sbjct: 654 DQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKI 713

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +++EA  L+ E+E+ G+  ++VTY+  ++G    G +  AF  L +M+    + +  T+
Sbjct: 714 GQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTY 773

Query: 484 NIIIYAYCKQG----------------KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
            +++  + K                  ++N   QLL+R+   G  NP +++Y+S++ G C
Sbjct: 774 WLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHG-LNPTVVTYSSIIAGFC 832

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +  ++EA + L  ML + I PN   + +L++
Sbjct: 833 KATRLEEACVLLDHMLGKAISPNEEIYTMLIK 864



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 239/521 (45%), Gaps = 18/521 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +KC +   +  L +M   G++ +  ++ S+I+ Y +VG+   AL++F  +   G
Sbjct: 429 LINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG 488

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  ++  L+ + +      + + M+ DG+ P V  Y  L++  CK +  D A+
Sbjct: 489 CHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAF 548

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKE 178
           +L   M   G  PD  +Y  +  ++CK G+ EEA    +R G  ++   Y +L++G  K 
Sbjct: 549 RLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 608

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              + A  L+ +MV+ G   ++ TYS ++ +LC    +  +L IL QM V G   NI ++
Sbjct: 609 GNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAY 668

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T ++   +  G+   A  L+N MI  G  P+   Y+  I   C  G ++EA  +  +ME 
Sbjct: 669 TIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 728

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+V TY   I+G    G +  A     RM+   C PN   Y  ++K   + ++ + 
Sbjct: 729 DGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINA 788

Query: 359 AH----------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            +                 L+E+M      P  VT+++ I G C   R++ A  LLD M 
Sbjct: 789 HYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHML 848

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                PN   Y  L+     +    +    VT++ + G Q  + +Y+ ++ G+C  G   
Sbjct: 849 GKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYD 908

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            A  L   +L      + + + I+     K G V+   QLL
Sbjct: 909 RAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLL 949



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 261/581 (44%), Gaps = 28/581 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + LL      G + +   F ++IN Y +    + AL++   +     K  ++ Y 
Sbjct: 368 KLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYG 427

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L+ + R        + M  +G+ PNV  Y  ++   CK   V  A ++   M ++
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHE 487

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+A +Y +++  + +  ++ +A  L  +        GV  Y  LI G CK+H+ + A
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNA 547

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L   M   G+ P+   Y+ +  +LC  G  E +   L +   +G      ++TSL+ G
Sbjct: 548 FRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSLVDG 604

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G T  A+ L  +M+ EG   ++  YS L+  LC    ++EA+S+  QM  +    N
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y+ +I    K G    A  ++N MIS+G  P+   YT  +   C+     +A  LI 
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 724

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   P+ VT++ FI G    G +D A   L +M    C PN  TY  LL   L+++
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMS 784

Query: 425 RVKEAF----------------ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            +   +                +L+  + K G+   +VTY++I+ G C+A  + EA  LL
Sbjct: 785 LINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLL 844

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGIC 527
             ML +    +   + ++I   C        +  + D I  G  + P + SY  L+ G+C
Sbjct: 845 DHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFG--FQPQLESYHYLIVGLC 902

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           + G    A      +L      N   W +L   L    GH+
Sbjct: 903 DEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLL-KAGHV 942



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 202/474 (42%), Gaps = 46/474 (9%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN-KGCAPDAVSYTTIVSSICKLGQ 150
           +R G      ++  LL+ L +        KL++ M +  G A D       + +I ++G 
Sbjct: 78  RRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVG- 136

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                    R       YN  +  L +    E    L   +V  G+ P+ +TY+T+I + 
Sbjct: 137 -------GKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAY 189

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G++  +                H +  LL+                     G   + 
Sbjct: 190 CKKGSLAIA----------------HRYFCLLR-------------------ESGMQMDT 214

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
              + L+ G C    + +A  +   M    C  N  +Y+ LI G  +A  +  A  +   
Sbjct: 215 YTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFM 274

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+ +GCS N+  YT ++K LC+    H A  L+++M      P+  T+N  I G C  GR
Sbjct: 275 MVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGR 334

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A+ +   M+Q  C P+  TYN L+ GL    ++ EA EL+      G    ++T+  
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTN 393

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++G C+A  + +A ++   M+    KLD   + ++I    K+ ++  A + L+ +   G
Sbjct: 394 LINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              P+++ YTS++ G C  G +  A    + M +EG  PN  T+  L+  L  +
Sbjct: 454 -LAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQD 506


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 246/486 (50%), Gaps = 10/486 (2%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G++     F  V+ SY R G    A+++   +++ G++P + I N  +  L+  N+    
Sbjct: 166 GIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKA 225

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                 M+  G+ PNV TYN L+K  C   +V+ A +L+ EM  KGC PD VSY T++  
Sbjct: 226 LRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGF 285

Query: 145 ICKLGQVEEARELAMR-------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           +C+  +++E R L  +       F   V+ YN L++ L K    +EA   L E  +RG  
Sbjct: 286 LCQDKRIKEVRNLMEKMVKDNKLFPDQVT-YNTLVHMLSKHGHADEALEFLRETEERGFQ 344

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            + + YS I++S C  G ++ +  I+ +M  +GC+P++ ++T+++ G    G+  EA  +
Sbjct: 345 VDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKM 404

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             +M + G  PN V+Y+ L++GLC +G+  EA  +    EE+   PN  TYS ++ G  +
Sbjct: 405 LQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRR 464

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G L  A  +   M++ G  P  V    ++K LC     ++A   +E+     C  N V 
Sbjct: 465 EGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVN 524

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           F T I G C    +D A+ LLD M      P+  T+  ++D L +  R++EA     ++ 
Sbjct: 525 FTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKML 584

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K G+    VTY  ++H  C+ G V E  +LLGKML       A  +N +I   C  G   
Sbjct: 585 KKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTA--YNQVIEKLCNFGNPE 642

Query: 498 NAIQLL 503
            A +++
Sbjct: 643 AADKVV 648



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 246/462 (53%), Gaps = 7/462 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRF 161
           Y ++L+ L K     GA ++L  M  +G A    ++  ++ S  + G++  A + L M  
Sbjct: 139 YYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQ 198

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +GV     + N  I+ L   +K+E+A   L  M   GI PNV+TY+ +I   CD+  VE
Sbjct: 199 KAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVE 258

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL-PNVVAYSTL 276
            ++ ++ +M  +GC P+  S+ +++       R  E  +L  +M+++  L P+ V Y+TL
Sbjct: 259 HAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTL 318

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +H L  +G  DEA+    + EE     +   YSA+++ F   G +  A +I N MI+ GC
Sbjct: 319 VHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGC 378

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           SP+VV YT +V  LC+     +A  ++++M    C PNTV++   + GLC  G    A +
Sbjct: 379 SPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEARE 438

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +++  ++    PN  TY+ ++ GL R  ++ EA ++V E+   G     V  N ++  +C
Sbjct: 439 MMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLC 498

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               + EA + + + L  G  ++A+ F  +I+ +C+   ++ A+ LLD +    + +PD 
Sbjct: 499 LEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNK-HPDA 557

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +++T+++  +   G ++EA +Y  KML +G+ P   T+  ++
Sbjct: 558 VTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVI 599



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 168/329 (51%), Gaps = 6/329 (1%)

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  ++  Y   G+   A  +   M + G  PN++  +T IH L     +++A+    +
Sbjct: 172 EAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLER 231

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+     PNV TY+ LI G+     +  A ++   M   GC P+ V+Y  ++  LCQ+  
Sbjct: 232 MQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKR 291

Query: 356 FHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +  +L+EKM  +N   P+ VT+NT +  L   G  D A++ L + ++     +   Y+
Sbjct: 292 IKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYS 351

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            +++      R+  A E+V E+   G   ++VTY  +++G+C+ G V EA ++L +M   
Sbjct: 352 AIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKH 411

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE--WNPDIISYTSLLWGICNSGGM 532
           G K + +++  ++   C+ G   N+++  + +    E  W P+ I+Y+ ++ G+   G +
Sbjct: 412 GCKPNTVSYTALLNGLCQHG---NSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKL 468

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            EA   +++ML +G  P     N+L++SL
Sbjct: 469 SEACDVVREMLTKGFFPTPVEINLLIKSL 497



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 180/429 (41%), Gaps = 76/429 (17%)

Query: 10  EIDGVQYLLQQM-KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
            I  V+ L+++M K   +   +  + ++++   + G A++AL+      E G +     Y
Sbjct: 291 RIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGY 350

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + I+++   + R      I + M   G  P+V TY  ++  LCK  +V+ A K+L +M  
Sbjct: 351 SAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYK 410

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL---------------------AMR------- 160
            GC P+ VSYT +++ +C+ G   EARE+                      +R       
Sbjct: 411 HGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSE 470

Query: 161 -------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
                        F + V + N LI  LC E K+ EA   + E ++RG   N + ++T+I
Sbjct: 471 ACDVVREMLTKGFFPTPVEI-NLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVI 529

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C   N++T+L +L  M++   +P+  +FT+++      GR  EA+    +M+++G  
Sbjct: 530 HGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLD 589

Query: 268 PNVV---------------------------------AYSTLIHGLCSNGSMDEAVSVSY 294
           P  V                                 AY+ +I  LC+ G+ + A  V  
Sbjct: 590 PTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEKLCNFGNPEAADKVVG 649

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +   +   +  T   L++ +   G  L A ++  RM      P++     + K L    
Sbjct: 650 LVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEG 709

Query: 355 MFHQAHSLI 363
              +A +L+
Sbjct: 710 KLEEADNLM 718



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 136/324 (41%), Gaps = 38/324 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +LQQM   G   +   + +++N   + G + +A +M     E    P    Y+
Sbjct: 397 KVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYS 456

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E + S    +   M   G  P     N+L+K+LC   +++ A K + E  N+
Sbjct: 457 VVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNR 516

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           GCA +AV++TT++   C+   ++ A  L               + A+I+ L K+ +IEEA
Sbjct: 517 GCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEA 576

Query: 185 FWLLCEMVDRGIDPNVITYSTII---------------------------------SSLC 211
                +M+ +G+DP  +TY  +I                                   LC
Sbjct: 577 TVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTAYNQVIEKLC 636

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           + GN E +  ++G +       + ++   L++ YL  G    A  +  RM     +P++ 
Sbjct: 637 NFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLK 696

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQ 295
               L   L   G ++EA ++  Q
Sbjct: 697 LCEKLSKKLVLEGKLEEADNLMLQ 720



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/221 (20%), Positives = 102/221 (46%)

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + Y  M++VL +  +   A  ++  M           F   +      G++  AM++L  
Sbjct: 137 IVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTM 196

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++    PN+   N  +  L+  N++++A   +  ++  GI  N+VTYN ++ G C    
Sbjct: 197 MQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQ 256

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V  A +L+ +M  +G   D +++  ++   C+  ++     L++++    +  PD ++Y 
Sbjct: 257 VEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYN 316

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L+  +   G   EA  +L++    G   +   ++ +V S 
Sbjct: 317 TLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSF 357



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 7/203 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F +VI+ + +    + AL +   +      P    +  I+DAL  + R          M 
Sbjct: 525 FTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKML 584

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G++P   TY  ++   CK  RV+   KLL +M ++     A  Y  ++  +C  G  E
Sbjct: 585 KKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTA--YNQVIEKLCNFGNPE 642

Query: 153 EARE---LAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +   L +R  S +     + L+     +     A+ + C M DR + P++     + 
Sbjct: 643 AADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLS 702

Query: 208 SSLCDVGNVETSLGILGQMFVRG 230
             L   G +E +  ++ Q   RG
Sbjct: 703 KKLVLEGKLEEADNLMLQFVQRG 725


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 273/536 (50%), Gaps = 7/536 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
             + ++I +      A+  L +  +++E G + TV ++  ++     E R      +   
Sbjct: 203 SAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDE 262

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           MK +    ++  YN+ +    K  +VD A+K   E+ ++G  PD V++T+++  +CK  +
Sbjct: 263 MKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAER 322

Query: 151 VEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           V+EA EL     S  SV     YN +I G     K  EA+ LL     +G  P+VI Y+ 
Sbjct: 323 VDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNC 382

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I++ L   G VE +L IL  M +    PN+ S+  L+      G    A  + + M   G
Sbjct: 383 ILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYNILIDMLCKAGELEAALKVQDSMKEAG 441

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN++  + +I  LC    +DEA S+   ++   C P+  T+ +LIDG  + G +  A 
Sbjct: 442 LFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAY 501

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            ++ +M+ +G +PN V YT +++   +       H + ++M    C P+ +  N ++  +
Sbjct: 502 MLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCV 561

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G ++    L +++K     P++ +Y+ L+ GL++    K+ ++L  E+++ G+ L+ 
Sbjct: 562 FKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDT 621

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             YN ++ G C++G V +A+QLL +M  +G +   +T+  +I    K  +++ A  L + 
Sbjct: 622 RAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 681

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +     + +++ Y+SL+ G    G + EA++ L++++ +G+ PN  TWN L+ +L
Sbjct: 682 AKSKA-VDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDAL 736



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 283/571 (49%), Gaps = 9/571 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL +MK    +    ++   I+ + +VG  + A K F+ ++  GL P    +  
Sbjct: 253 VDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTS 312

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L    R      ++  +  +   P V+ YN ++       + + AY LL     KG
Sbjct: 313 MIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
           C P  ++Y  I++ + + G+VEEA      + M     ++ YN LI+ LCK  ++E A  
Sbjct: 373 CIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +   M + G+ PN+IT + +I  LC    ++ +  I   +  + C P+  +F SL+ G  
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLG 492

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+ ++A  L+ +M+  G  PN V Y++LI      G  ++   +  +M    C P++ 
Sbjct: 493 RHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLM 552

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
             +  +D   KAG +     ++  + + G +P+V +Y+ ++  L +       + L  +M
Sbjct: 553 LLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM 612

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +    +T  +N  I G C  G+V+ A +LL++MK     P + TY  ++DGL +++R+
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA+ L  E +   + LN+V Y++++ G  + G + EA+ +L +++ +G   +  T+N +
Sbjct: 673 DEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCL 732

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           + A  K  +++ A+     ++   +  P+ ++Y+ ++ G+C      +AF++ Q+M  +G
Sbjct: 733 LDALVKAEEIDEALVCFQNMK-NLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG 791

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           + PN  T+  ++    S L  +G V    D+
Sbjct: 792 LKPNTITYTTMI----SGLARVGNVLEAKDL 818



 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 251/517 (48%), Gaps = 7/517 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  Y  VG   +A  +  R +  G  P+V  YN IL  L  + +      I   MK D
Sbjct: 347 TMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMD 406

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
              PN+ +YNIL+  LCK   ++ A K+   M   G  P+ ++   ++  +CK  +++EA
Sbjct: 407 AA-PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEA 465

Query: 155 RELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             + +     V       + +LI+GL +  K+ +A+ L  +M+D G  PN + Y+++I +
Sbjct: 466 CSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRN 525

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
               G  E    I  +M  RGC+P++    + +      G   +   L+  +  +G  P+
Sbjct: 526 FFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPD 585

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V +YS LIHGL   G   +   + Y+M+E     +   Y+ +IDGF K+G +  A Q+  
Sbjct: 586 VRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLE 645

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M + G  P VV Y  ++  L + +   +A+ L E+   +    N V +++ I G    G
Sbjct: 646 EMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVG 705

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R+D A  +L+++ Q    PN  T+N LLD L++   + EA      ++      N VTY+
Sbjct: 706 RIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYS 765

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++G+C+     +AF    +M  +G K + IT+  +I    + G V  A  L +R +  
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSS 825

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           G   PD   Y +++ G+ N+    +A+I  ++   +G
Sbjct: 826 GGI-PDSACYNAMIEGLSNANKAMDAYILFEETRLKG 861



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 237/516 (45%), Gaps = 41/516 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++ K +G   S   +  ++    R G  E+AL++   ++     P +  YN ++D L 
Sbjct: 364 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMK-MDAAPNLTSYNILIDMLC 422

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +  +MK  G+ PN+ T NI++  LCK  R+D A  + + + +K C PD+V
Sbjct: 423 KAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSV 482

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           ++ +++  + + G+V +A  L  +   SG +    VY +LI    K  + E+   +  EM
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG-- 249
           + RG  P+++  +  +  +   G +E    +  ++  +G  P++ S++ L+ G + GG  
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602

Query: 250 ---------------------------------RTHEASDLWNRMIREGFLPNVVAYSTL 276
                                            + ++A  L   M  +G  P VV Y ++
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GL     +DEA  +  + +  +   NV  YS+LIDGF K G +  A  I   ++  G 
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +PN   + C++  L +     +A    + M    CPPN VT++  + GLC   + + A  
Sbjct: 723 TPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFV 782

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
              +M++    PN  TY  ++ GL RV  V EA +L    +  G   +   YN ++ G+ 
Sbjct: 783 FWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLS 842

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
            A   ++A+ L  +  ++G ++ + T  +++ A  K
Sbjct: 843 NANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHK 878



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 231/513 (45%), Gaps = 42/513 (8%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG K +++    +L+ MK++         I +I+   + G  E ALK+   ++E GL P 
Sbjct: 387 LGRKGKVEEALRILEAMKMDAAPNLTSYNI-LIDMLCKAGELEAALKVQDSMKEAGLFPN 445

Query: 65  VKIYNHILDALLAENRF-----------------------SMINPI------------YS 89
           +   N ++D L    R                        S+I+ +            Y 
Sbjct: 446 IITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYE 505

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            M   G  PN   Y  L++   K  R +  +K+  EM ++GC+PD +     +  + K G
Sbjct: 506 KMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAG 565

Query: 150 QVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           ++E+ R L     A      V  Y+ LI+GL K    ++ + L  EM ++G+  +   Y+
Sbjct: 566 EIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYN 625

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +I   C  G V  +  +L +M  +G  P + ++ S++ G     R  EA  L+     +
Sbjct: 626 IVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 685

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
               NVV YS+LI G    G +DEA  +  ++ +    PN  T++ L+D   KA  +  A
Sbjct: 686 AVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA 745

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              +  M +  C PN V Y+ MV  LC+   F++A    ++M  +   PNT+T+ T I G
Sbjct: 746 LVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISG 805

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L   G V  A  L ++ K    +P+   YN +++GL   N+  +A+ L  E    G ++ 
Sbjct: 806 LARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIY 865

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             T   +L  + +A  + +A  ++G +L E  K
Sbjct: 866 SKTCVVLLDALHKADCLEQA-AIVGAVLREMAK 897



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 8/400 (2%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNAL+  + +   +E    +L EM   G  P+  T   +++S      +  + G++  M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 P   ++T+L+              L  +M   G+   V  ++TLI      G +
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A+S+  +M+ NS   ++  Y+  ID F K G +  A + ++ + S G  P+ V +T M
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           + VLC+     +A  L E++      P    +NT I G    G+ + A  LL++ K+  C
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGC 373

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++  YN +L  L R  +V+EA  ++ E  K     N+ +YN ++  +C+AG +  A +
Sbjct: 374 IPSVIAYNCILTCLGRKGKVEEALRIL-EAMKMDAAPNLTSYNILIDMLCKAGELEAALK 432

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL---LDRIRGGGEWNPDIISYTSLL 523
           +   M   G   + IT NI+I   CK  +++ A  +   LD         PD +++ SL+
Sbjct: 433 VQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDH----KVCTPDSVTFCSLI 488

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            G+   G + +A++  +KML+ G  PN   +  L+R+ F 
Sbjct: 489 DGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFK 528



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 202/416 (48%), Gaps = 3/416 (0%)

Query: 148 LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           L Q+ E   +A  FG   +    ++    K  K+ EAF ++  M      P    Y+T+I
Sbjct: 151 LEQILEEMSMA-GFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLI 209

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +L      +  L +L QM   G    +H FT+L+  +   GR   A  L + M    F 
Sbjct: 210 GALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFN 269

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            ++V Y+  I      G +D A    ++++     P+  T++++I    KA  +  A ++
Sbjct: 270 ADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVEL 329

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  + SN   P V AY  M+        F++A+SL+E+   + C P+ + +N  +  L  
Sbjct: 330 FEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGR 389

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G+V+ A+++L+ MK  +  PN+T+YN L+D L +   ++ A ++   +++ G+  NI+T
Sbjct: 390 KGKVEEALRILEAMKM-DAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIIT 448

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
            N ++  +C+A  + EA  +   +  +    D++TF  +I    + GKVN+A  L +++ 
Sbjct: 449 VNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKML 508

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             G+  P+ + YTSL+      G  ++     ++M++ G  P+    N  +  +F 
Sbjct: 509 DSGQ-TPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/233 (18%), Positives = 104/233 (44%), Gaps = 2/233 (0%)

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           AY  ++ ++ +         ++E+M+     P+  T    +       ++  A  +++ M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           ++++  P  + Y  L+  L   +       L+ ++++ G ++ +  + T++    R G V
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  LL +M       D + +N+ I  + K GKV+ A +    ++  G   PD +++TS
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQG-LVPDDVTFTS 312

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           ++  +C +  + EA    +++ +    P    +N ++   + ++G     Y L
Sbjct: 313 MIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMG-YGSVGKFNEAYSL 364


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 255/546 (46%), Gaps = 63/546 (11%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
             L ++A+ +  R+R     P V  Y  +L   L + +      I S M  +G  PN   
Sbjct: 285 ASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREM 344

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK--------------- 147
           +N L+ A CK+     AYKL  +M   GC P  + Y   + SIC                
Sbjct: 345 FNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEK 404

Query: 148 --------------------------LGQVEEARE-----LAMRFGSGVSVYNALINGLC 176
                                      G+ ++A E     ++  F    S Y+ +I  LC
Sbjct: 405 AYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLC 464

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              K+E+AF L  EM   GI P+V TY+ +I S C  G ++ +     +M    C PN+ 
Sbjct: 465 DASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVV 524

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA------- 289
           ++TSL+  YL   +  +A+ L+  M+ EG  PNVV Y+ LI G C  G +D+A       
Sbjct: 525 TYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584

Query: 290 --------VSVSYQMEENSC-PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                   + + +++++N C  PN+ TY AL+DG  KA  +  A ++ + M  NGC PN 
Sbjct: 585 QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQ 644

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + Y  ++   C+      A  +  KM+     PN  T+++ I  L    R+D  +K+L +
Sbjct: 645 IVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSK 704

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +  C PN+  Y +++DGL +V + +EA+ L+ ++E+ G   N++TY  ++ G  + G 
Sbjct: 705 MLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGK 764

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +  +L   M  +G   + IT+ ++I   C  G ++ A +LLD ++    W   I SY 
Sbjct: 765 IEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK-QTYWPRHISSYR 823

Query: 521 SLLWGI 526
            ++ G 
Sbjct: 824 KIIEGF 829



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 246/520 (47%), Gaps = 25/520 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D    ++ +M  +G    +  +  VI         E+A  +F  +++ G+ P+V  Y 
Sbjct: 433 KFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYT 492

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D+             +  M RD   PNV TY  L+ A  K  +V  A KL   M  +
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE 552

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS---------------------VY 168
           G  P+ V+YT ++   CK GQ+++A ++  R    +                       Y
Sbjct: 553 GSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITY 612

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
            AL++GLCK +++EEA  LL  M   G +PN I Y  +I   C  G +E +  +  +M  
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG  PN+++++SL+       R      + ++M+     PNVV Y+ +I GLC  G  +E
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +  +MEE  C PNV TY+A+IDGF K G +    +++  M S GC+PN + Y  ++ 
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C   +  +AH L+++M     P +  ++   I+G         ++ LLD++ + E +P
Sbjct: 793 HCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVP 850

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTILHGVCRAGMVVEAFQ 466
             + Y  L+D  ++  R++ A  L+ EI         N   Y +++  +  A  V +AF+
Sbjct: 851 VESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFE 910

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           L   M+ +    +  TF  +I    + GK   A+QL D I
Sbjct: 911 LYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/579 (25%), Positives = 264/579 (45%), Gaps = 66/579 (11%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME---- 97
           R G+   AL+   R+++FG K +   YN ++   L  ++      ++  M   G      
Sbjct: 182 RNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGC 241

Query: 98  ----------------------------PNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
                                       P+   YN ++  LC+ +    A  +L  M + 
Sbjct: 242 TLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSI 301

Query: 130 GCAPDAVSYTTIVSSICKLGQVEE-ARELAMRFGSGV----SVYNALINGLCKEHKIEEA 184
            C P+ V+Y  ++S     GQ+    R L+M    G      ++N+L++  CK      A
Sbjct: 302 SCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYA 361

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGN------VETSLGILGQMFVRGC---NPNI 235
           + L  +M+  G  P  + Y+  I S+C          +E +     +M   G      N+
Sbjct: 362 YKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNV 421

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F   L G    G+  +A ++   M+ +GF+P+   YS +I  LC    +++A  +  +
Sbjct: 422 SNFARCLCG---AGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEE 478

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++N   P+V TY+ LID F KAG +  A   ++ M+ + C+PNVV YT ++    +   
Sbjct: 479 MKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARK 538

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK------------- 402
              A+ L E M  E   PN VT+   I G C  G++D A ++  +M+             
Sbjct: 539 VFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFK 598

Query: 403 --QYEC-LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
               +C  PNI TY  L+DGL + NRV+EA EL+  +   G + N + Y+ ++ G C+ G
Sbjct: 599 LDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG 658

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A ++  KM   G   +  T++ +I +  K+ +++  +++L ++       P+++ Y
Sbjct: 659 KLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENS-CTPNVVIY 717

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           T ++ G+C  G  +EA+  + KM   G  PN  T+  ++
Sbjct: 718 TDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMI 756



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 226/496 (45%), Gaps = 25/496 (5%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +K  G + +  TYN L++   + +++D A+ +  EM N G   D  +      S+CK G+
Sbjct: 196 LKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGR 255

Query: 151 VEEARELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
             +A  L  +  F      YN +++GLC+    +EA  +L  M      PNV+TY  ++S
Sbjct: 256 CGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLS 315

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
                G +     IL  M   GC PN   F SL+  Y        A  L+ +MI+ G  P
Sbjct: 316 GCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQP 375

Query: 269 NVVAYSTLIHGLCSNGSM--DEAVSVSYQMEENSCPPNVTTYSALIDGFAK----AGNLL 322
             + Y+  I  +CSN  +   + + ++ +         V      +  FA+    AG   
Sbjct: 376 GYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFD 435

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A +I   M+S G  P+   Y+ ++  LC  +   +A  L E+M      P+  T+   I
Sbjct: 436 KAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILI 495

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
              C  G +  A    D+M +  C PN+ TY  L+   L+  +V +A +L   +   G +
Sbjct: 496 DSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSK 555

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKML--IEGTKLDA--------------ITFNII 486
            N+VTY  ++ G C+AG + +A Q+  +M   IE + +D               IT+  +
Sbjct: 556 PNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGAL 615

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +   CK  +V  A +LLD +   G   P+ I Y +L+ G C +G ++ A     KM   G
Sbjct: 616 VDGLCKANRVEEAHELLDTMSVNG-CEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG 674

Query: 547 ICPNFATWNVLVRSLF 562
            CPN  T++ L+ SLF
Sbjct: 675 YCPNLYTYSSLINSLF 690



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 128/556 (23%), Positives = 227/556 (40%), Gaps = 140/556 (25%)

Query: 103 YNILLKALC----KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           YN L++ LC     N+RV   + + +   ++      +++  ++   C+ G    A E  
Sbjct: 136 YNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNF--LIQKCCRNGMWNVALEEL 193

Query: 159 MR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            R     + +  + YNALI    +  K++ AF +  EM + G   +  T      SLC  
Sbjct: 194 GRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKA 253

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G    +L +L                                       +E F+P+ V Y
Sbjct: 254 GRCGDALSLLE--------------------------------------KEEFVPDTVFY 275

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + ++ GLC      EA+ +  +M   SC PNV TY  L+ G    G L    +I + M++
Sbjct: 276 NRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMT 335

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI----------- 382
            GC PN   +  +V   C++  +  A+ L +KM    C P  + +N FI           
Sbjct: 336 EGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPG 395

Query: 383 ------------------------------KGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                                         + LCG G+ D A +++ +M     +P+ +T
Sbjct: 396 SDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDST 455

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGI------------------------------- 441
           Y++++  L   ++V++AF L  E++K GI                               
Sbjct: 456 YSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEML 515

Query: 442 ----QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
                 N+VTY +++H   +A  V +A +L   ML+EG+K + +T+  +I  +CK G+++
Sbjct: 516 RDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQID 575

Query: 498 NAIQLLDRIRGGGEWN---------------PDIISYTSLLWGICNSGGMQEAFIYLQKM 542
            A Q+  R++G  E +               P+II+Y +L+ G+C +  ++EA   L  M
Sbjct: 576 KACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTM 635

Query: 543 LNEGICPNFATWNVLV 558
              G  PN   ++ L+
Sbjct: 636 SVNGCEPNQIVYDALI 651



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 167/355 (47%), Gaps = 17/355 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   ++    LL  M V G   ++ V+ ++I+ + + G  E A ++F ++ E G
Sbjct: 615 LVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG 674

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  Y+ ++++L  E R  ++  + S M  +   PNV  Y  ++  LCK  + + AY
Sbjct: 675 YCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAY 734

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L+++M   GC P+ ++YT ++    K+G++E+  EL     S         Y  LIN  
Sbjct: 735 RLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHC 794

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE--TSLGILGQMFVRGCNP 233
           C    ++EA  LL EM       ++ +Y  II       N E  TS+G+L ++      P
Sbjct: 795 CSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF----NREFITSIGLLDELSENESVP 850

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVS 291
               +  L+  ++  GR   A +L   +     L   N   Y++LI  L     +D+A  
Sbjct: 851 VESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFE 910

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN---RMISNGCSPNVVAY 343
           +   M   +  P ++T+  LI G  + G    A Q+ +   +M+ + CS N V Y
Sbjct: 911 LYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCHVCS-NFVNY 964



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 79/381 (20%)

Query: 257 LW-NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME-----------------E 298
           LW +R I  G+    V Y+ LI  LC N   ++ VS  + M+                 +
Sbjct: 121 LWASRQI--GYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQ 178

Query: 299 NSC--------------------PPNVTTYSALIDGFAKAGNLLGASQIWNRMIS----- 333
             C                      + TTY+ALI  F +A  L  A  +   M +     
Sbjct: 179 KCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRM 238

Query: 334 NGCS---------------------------PNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +GC+                           P+ V Y  MV  LC+ ++F +A  ++++M
Sbjct: 239 DGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRM 298

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
              +C PN VT+   + G  G G++    ++L  M    C PN   +N L+    +    
Sbjct: 299 RSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDY 358

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCR------AGMVVEAFQLLGKMLIEGTKLDA 480
             A++L  ++ KCG Q   + YN  +  +C       + ++  A +   +ML  G  L+ 
Sbjct: 359 SYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNK 418

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +  +      C  GK + A +++  +   G + PD  +Y+ ++  +C++  +++AF+  +
Sbjct: 419 VNVSNFARCLCGAGKFDKAFEIICEMMSKG-FVPDDSTYSKVIGFLCDASKVEKAFLLFE 477

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           +M   GI P+  T+ +L+ S 
Sbjct: 478 EMKKNGIVPSVYTYTILIDSF 498


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/534 (28%), Positives = 270/534 (50%), Gaps = 9/534 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  Y R G   Q            + P    Y  I+ +L A    +    +   M   
Sbjct: 81  AMIAGYCRAG---QVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLR 137

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G        +++L+A C+      A + L  +  KGC  D+ +   +VS+IC+ G V+E 
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            EL  +  S      +  YNA++ GLC   + ++   L+ EMV  G  PNV T++T+I+ 
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAY 257

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G  E     L QM   GC P++  + +++ G    G    A+D+ +RM   G  PN
Sbjct: 258 LCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPN 317

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+T++ GLCS    +EA  +  +M +  CP +  T++ L+D F + G +    ++  
Sbjct: 318 VVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLE 377

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M+ +GC P+V+ YT ++   C+  +  +A  L++ M+   C PNT+++   +KGLC   
Sbjct: 378 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAE 437

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           R   A +L+  M Q  CLPN  T+N L++ + +   V++A EL+ ++   G   ++++Y+
Sbjct: 438 RWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYS 497

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T++ G+ +AG   EA +LL  M+ +G   + I ++ +  A  ++G+ +  IQ+ D I+  
Sbjct: 498 TVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQ-D 556

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
                D   Y +++  +C       A  +   M++ G  PN +T+ +L+R L S
Sbjct: 557 ATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLAS 610



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 154/493 (31%), Positives = 256/493 (51%), Gaps = 41/493 (8%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           L+++LC   R   A + L   G+   A   V+Y  +++  C+ GQV  AR LA       
Sbjct: 50  LIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVPP 106

Query: 166 SVYN--ALINGLCKEHKIEEAFWLLCEMVDRGIDP-----NVITYST------------- 205
           + Y    ++  LC    I +A  +L EM  RG        +VI  +              
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166

Query: 206 -----------------IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
                            ++S++C+ G V+  + +L ++   GC P+I S+ ++LKG  + 
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  +  +L   M+R G  PNV  ++TLI  LC NG  ++      QM E+ C P++  Y
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMY 286

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + +IDG  K G+   A+ I +RM S G  PNVV Y  ++K LC    + +A  L+ +M  
Sbjct: 287 ATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ 346

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E+CP + VTFN  +   C  G VD  ++LL+QM ++ C+P++ TY  +++G  +   V E
Sbjct: 347 EDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDE 406

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  L+  +  CG + N ++Y  +L G+CRA   V+A +L+  M+ +G   + +TFN +I 
Sbjct: 407 AVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLIN 466

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             CK+G V  AI+LL ++   G  +PD+ISY++++ G+  +G  +EA   L  M+N+GI 
Sbjct: 467 FMCKKGLVEQAIELLKQMLVNG-CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525

Query: 549 PNFATWNVLVRSL 561
           PN   ++ +  +L
Sbjct: 526 PNTIIYSSMASAL 538



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 226/489 (46%), Gaps = 30/489 (6%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           LQ +  +G +   G    V+++    G  ++ +++  ++  FG +P +  YN +L  L  
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
             R+  +  +   M R G  PNV T+N L+  LC+N   +  ++ L +M   GC PD   
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           Y TI                              I+G+CK+   E A  +L  M   G+ 
Sbjct: 286 YATI------------------------------IDGICKDGHHEVANDILSRMPSYGLK 315

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           PNV+ Y+T++  LC     E +  +L +MF   C  +  +F  L+  +   G      +L
Sbjct: 316 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 375

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             +M+  G +P+V+ Y+T+I+G C  G +DEAV +   M    C PN  +Y+ ++ G  +
Sbjct: 376 LEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCR 435

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A   + A ++ + MI  GC PN V +  ++  +C+  +  QA  L+++M    C P+ ++
Sbjct: 436 AERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLIS 495

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++T I GL   G+ + A++LL+ M      PN   Y+ +   L R  R  +  ++   I+
Sbjct: 496 YSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQ 555

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              ++ +   YN ++  +C+      A      M+  G   +  T+ I+I     +G V 
Sbjct: 556 DATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVR 615

Query: 498 NAIQLLDRI 506
            A  LL  +
Sbjct: 616 EAQDLLSEL 624



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 190/395 (48%), Gaps = 40/395 (10%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V+ L+ +M   G   +   F ++I    R GL EQ  +   ++ E G  P +++Y  I
Sbjct: 230 DDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATI 289

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR---------------- 115
           +D +  +    + N I S M   G++PNV  YN +LK LC   R                
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349

Query: 116 -------------------VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
                              VD   +LL +M   GC PD ++YTT+++  CK G V+EA  
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409

Query: 157 LAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L     +         Y  ++ GLC+  +  +A  L+  M+ +G  PN +T++T+I+ +C
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 469

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G VE ++ +L QM V GC+P++ S+++++ G    G+T EA +L N MI +G  PN +
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTI 529

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            YS++   L   G  D+ + +   +++ +   +   Y+A+I    K      A   +  M
Sbjct: 530 IYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYM 589

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +SNGC PN   YT +++ L    +  +A  L+ ++
Sbjct: 590 VSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 172/360 (47%), Gaps = 40/360 (11%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V   L QM   G +    ++ ++I+   + G  E A  +  R+  +GLKP V  YN +L 
Sbjct: 267 VHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 326

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L +  R+     + + M ++    +  T+NIL+   C+N  VD   +LL +M   GC P
Sbjct: 327 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 386

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           D ++YTT+++  CK G V+EA  L     +         Y  ++ GLC+  +  +A  L+
Sbjct: 387 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 446

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M+ +G  PN +T++T+I+ +C  G VE ++ +L QM V GC+P++ S+++++ G    
Sbjct: 447 SHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 506

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTL-------------------------------- 276
           G+T EA +L N MI +G  PN + YS++                                
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566

Query: 277 ---IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
              I  LC     D A+     M  N C PN +TY+ LI G A  G +  A  + + + S
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 626



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 5/256 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D V  LL+QM   G       + +VIN + + GL ++A+ +   +   G KP    Y  
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L    R+     + S+M + G  PN  T+N L+  +CK   V+ A +LL +M   G
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C+PD +SY+T++  + K G+ EEA EL  +    G++    +Y+++ + L +E + ++  
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 548

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   + D  +  +   Y+ +ISSLC     + ++     M   GC PN  ++T L++G 
Sbjct: 549 QMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 608

Query: 246 LLGGRTHEASDLWNRM 261
              G   EA DL + +
Sbjct: 609 ASEGLVREAQDLLSEL 624



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 4/189 (2%)

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V +N  I G C  G+V  A +L   +      PN  TY  ++  L     + +A  ++ E
Sbjct: 77  VAYNAMIAGYCRAGQVAAARRLAAAVPVP---PNAYTYFPIVRSLCARGLIADALTVLDE 133

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G        + IL   CR G    A + L  +  +G  LD+   N+++ A C+QG 
Sbjct: 134 MPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGC 193

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+  ++LL ++   G   PDI+SY ++L G+C +    +    + +M+  G  PN AT+N
Sbjct: 194 VDEGVELLRKLPSFG-CEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFN 252

Query: 556 VLVRSLFSN 564
            L+  L  N
Sbjct: 253 TLIAYLCRN 261



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 75/156 (48%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+QM V G S     + +VI+   + G  E+AL++   +   G+ P   IY+ +  AL 
Sbjct: 480 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 539

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R   I  ++ +++   +  +   YN ++ +LCK    D A      M + GC P+  
Sbjct: 540 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 599

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALI 172
           +YT ++  +   G V EA++L     S  +V   L+
Sbjct: 600 TYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLV 635



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 64/129 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + +    LL  M  +G++ +  ++ S+ ++  R G  ++ ++MF  I++  
Sbjct: 499 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 558

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L            ++ M  +G  PN  TY IL++ L     V  A 
Sbjct: 559 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 618

Query: 121 KLLVEMGNK 129
            LL E+ ++
Sbjct: 619 DLLSELCSR 627


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 244/457 (53%), Gaps = 10/457 (2%)

Query: 95  GMEPNVFT--YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           G+EP+        L+K LC + R   A ++L       C PD ++Y  +V+  C  GQ++
Sbjct: 87  GLEPSAAPGPCAALIKKLCASGRTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLD 141

Query: 153 EARELA--MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            AR L   M        YN LI GLC   +   A  +L +M+ RG  P+V+TY+ ++ + 
Sbjct: 142 AARRLVADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEAT 201

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C     + ++ +L +M  +GC P+I ++  ++ G    GR  +A +    +   G  PN 
Sbjct: 202 CKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNT 261

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V+Y+ ++ GLC+    ++A  +  +M +   PPNV T++ LI    + G +  A ++ ++
Sbjct: 262 VSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQ 321

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   GC+PN ++Y  ++   C+     +A + +E M    C P+ V++NT +  LC  G 
Sbjct: 322 IPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGE 381

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           VD A++LL Q+K   C P + +YN ++DGL +  + KEA EL+ E+   G+Q +I+TY+T
Sbjct: 382 VDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYST 441

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           I  G+CR   + EA +   K+   G + + + +N I+   CK+ + +NAI L   +   G
Sbjct: 442 ISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              P+  +YT L+ G+   G ++EA   L ++ + G+
Sbjct: 502 -CMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 236/466 (50%), Gaps = 8/466 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS--YTTIVSSICKLGQVEEAR 155
           P+    N  L+ L +   ++ A +L+  M   G  P A       ++  +C  G+  EAR
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMS--GLEPSAAPGPCAALIKKLCASGRTAEAR 114

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            +       V  YNA++ G C   +++ A  L+ +M    ++P+  TY+T+I  LC  G 
Sbjct: 115 RVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGR 171

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
              +L +L  M  RGC P++ ++T LL+         +A  L + M  +G  P+++ Y+ 
Sbjct: 172 TGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNV 231

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++G+C  G +D+A+     +  + C PN  +Y+ ++ G   A     A ++   M   G
Sbjct: 232 VVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKG 291

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PNVV +  ++  LC+  +   A  +++++    C PN++++N  +   C   ++D AM
Sbjct: 292 YPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 351

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
             ++ M    C P+I +YN LL  L R   V  A EL+ +++  G    +++YNT++ G+
Sbjct: 352 AFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            +AG   EA +LL +M+ +G + D IT++ I    C++ ++  AI+   +++  G   P+
Sbjct: 412 TKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG-IRPN 470

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            + Y ++L G+C       A      M++ G  PN +T+ +L+  L
Sbjct: 471 TVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGL 516



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/391 (33%), Positives = 206/391 (52%), Gaps = 5/391 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           + +  ++P    YN ++  L    R      +  +M R G  P+V TY ILL+A CK + 
Sbjct: 147 VADMPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSG 206

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNA 170
              A KLL EM  KGCAPD ++Y  +V+ IC+ G+V++A E      S         YN 
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           ++ GLC   + E+A  L+ EM  +G  PNV+T++ +IS LC  G VE ++ +L Q+   G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN  S+  +L  +    +   A      M+  G  P++V+Y+TL+  LC  G +D AV
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            + +Q+++  C P + +Y+ +IDG  KAG    A ++ N M++ G  P+++ Y+ +   L
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+ +   +A     K+      PNTV +N  + GLC       A+ L   M    C+PN 
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNE 506

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +TY  L++GL     VKEA EL+ E+   G+
Sbjct: 507 STYTILIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 236/463 (50%), Gaps = 24/463 (5%)

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI----VSSICKLGQVEEAREL-----A 158
           K L  N+R++ A+           +P+AV +  +    +  + + G +EEA  L      
Sbjct: 34  KPLTPNSRLNFAH------AGVAASPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSG 87

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           +   +      ALI  LC   +  EA  +L        +P+V+ Y+ +++  C  G ++ 
Sbjct: 88  LEPSAAPGPCAALIKKLCASGRTAEARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDA 142

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  ++  M +    P+ +++ +L++G    GRT  A  + + M+R G +P+VV Y+ L+ 
Sbjct: 143 ARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLE 199

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
             C      +A+ +  +M    C P++ TY+ +++G  + G +  A +    + S+GC P
Sbjct: 200 ATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEP 259

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           N V+Y  ++K LC    +  A  L+ +M+ +  PPN VTFN  I  LC  G V+ AM++L
Sbjct: 260 NTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVL 319

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           DQ+ +Y C PN  +YN +L    +  ++  A   V  +   G   +IV+YNT+L  +CR 
Sbjct: 320 DQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRG 379

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G V  A +LL ++  +G     I++N +I    K GK   A++LL+ +   G   PDII+
Sbjct: 380 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG-LQPDIIT 438

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y+++  G+C    ++EA     K+ + GI PN   +N ++  L
Sbjct: 439 YSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 214/442 (48%), Gaps = 33/442 (7%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P V  YN ++       +      + ++M    MEP+ +TYN L++ LC   R   A  
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALV 177

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKI 181
           +L +M  +GC PD V+YT                               L+   CK    
Sbjct: 178 VLDDMLRRGCVPDVVTYTI------------------------------LLEATCKRSGY 207

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A  LL EM  +G  P++ITY+ +++ +C  G V+ ++  L  +   GC PN  S+  +
Sbjct: 208 KQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIV 267

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           LKG     R  +A  L   M ++G+ PNVV ++ LI  LC  G ++ A+ V  Q+ +  C
Sbjct: 268 LKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGC 327

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  +Y+ ++  F K   +  A      M+S GC P++V+Y  ++  LC+      A  
Sbjct: 328 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVE 387

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+ ++  + C P  +++NT I GL   G+   A++LL++M      P+I TY+ +  GL 
Sbjct: 388 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC 447

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R +R++EA     +++  GI+ N V YN IL G+C+      A  L   M+  G   +  
Sbjct: 448 REDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNES 507

Query: 482 TFNIIIYAYCKQGKVNNAIQLL 503
           T+ I+I     +G V  A +LL
Sbjct: 508 TYTILIEGLTYEGLVKEARELL 529



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 181/325 (55%), Gaps = 5/325 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           +QA+K+   +R  G  P +  YN +++ +  E R         ++   G EPN  +YNI+
Sbjct: 208 KQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIV 267

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS 163
           LK LC   R + A KL+ EM  KG  P+ V++  ++S +C+ G VE A E+     ++G 
Sbjct: 268 LKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGC 327

Query: 164 GVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             +   YN +++  CK+ K++ A   +  MV RG  P++++Y+T++++LC  G V+ ++ 
Sbjct: 328 TPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVE 387

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L Q+  +GC P + S+ +++ G    G+T EA +L N M+ +G  P+++ YST+  GLC
Sbjct: 388 LLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLC 447

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               ++EA+    ++++    PN   Y+A++ G  K      A  ++  MISNGC PN  
Sbjct: 448 REDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNES 507

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKM 366
            YT +++ L    +  +A  L+ ++
Sbjct: 508 TYTILIEGLTYEGLVKEARELLGEL 532



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 164/324 (50%), Gaps = 5/324 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G +     +  V+N   + G  + A++    +   G +P    YN +L  L 
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLC 272

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+     + + M + G  PNV T+N+L+  LC+   V+ A ++L ++   GC P+++
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332

Query: 137 SYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  I+ + CK  +++ A    EL +  G    +  YN L+  LC+  +++ A  LL ++
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            D+G  P +I+Y+T+I  L   G  + +L +L +M  +G  P+I +++++  G     R 
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA   + ++   G  PN V Y+ ++ GLC       A+ +   M  N C PN +TY+ L
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTIL 512

Query: 312 IDGFAKAGNLLGASQIWNRMISNG 335
           I+G    G +  A ++   + S G
Sbjct: 513 IEGLTYEGLVKEARELLGELCSRG 536



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 5/261 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  + L+ +M  +G   +   F  +I+   R GL E A+++  +I ++G  P    YN I
Sbjct: 278 EDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L A   + +          M   G  P++ +YN LL ALC+   VD A +LL ++ +KGC
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            P  +SY T++  + K G+ +EA EL            +  Y+ + +GLC+E +IEEA  
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIR 457

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
             C++ D GI PN + Y+ I+  LC       ++ +   M   GC PN  ++T L++G  
Sbjct: 458 AFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLT 517

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             G   EA +L   +   G +
Sbjct: 518 YEGLVKEARELLGELCSRGVV 538



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 79/164 (48%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL Q+K +G +     + +VI+   + G  ++AL++   +   GL+P +  Y+
Sbjct: 381 EVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYS 440

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I   L  E+R       +  ++  G+ PN   YN +L  LCK      A  L + M + 
Sbjct: 441 TISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISN 500

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALIN 173
           GC P+  +YT ++  +   G V+EAREL     S   V   LIN
Sbjct: 501 GCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLIN 544



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 9/174 (5%)

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P+    N+ L GL+R   ++EA  LV  +              ++  +C +G   EA +
Sbjct: 56  VPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARR 115

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L        + D + +N ++  YC  G+++ A +L+  +       PD  +Y +L+ G+
Sbjct: 116 VLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADM----PMEPDSYTYNTLIRGL 166

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           C  G    A + L  ML  G  P+  T+ +L+ +     G+   + +LD++ A 
Sbjct: 167 CGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 278/542 (51%), Gaps = 6/542 (1%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           I+ + + G  + A K F+ ++  GLKP    Y  ++  L    R      +++ M+ +  
Sbjct: 122 IDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P  + YN ++       R + AYKLL  +  +GC P  VS+ +I++ + K  +V+EA  
Sbjct: 182 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 241

Query: 157 L--AMRFGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           L   M+  +    S YN +I+ LC   ++EEA+ +L EM    + PN++T + ++  LC 
Sbjct: 242 LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 301

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              +E +  I      RGCNP+  ++ SL+ G    G+  EA  L+ +M+  G   N V 
Sbjct: 302 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 361

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y++LI     +G  ++   V  ++    C P++T  +  +D   KAG +     I+  + 
Sbjct: 362 YTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 421

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S G  P+V +Y+ ++  L +     +  ++   M  +    +   +N  + G C  G+V 
Sbjct: 422 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A ++L++MK+    P + TY  ++DGL +++R+ EA+ L  E +  GI+LN+V Y++++
Sbjct: 482 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 541

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G  + G + EA+ +L +M+ +G   +  T+N ++ A  K  ++N A+     ++   + 
Sbjct: 542 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK-EMKC 600

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P+  +Y+ L+ G+C      +AF++ Q M  +G+ PN  T+  ++  L + +G++   Y
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL-AKVGNITDAY 659

Query: 573 IL 574
            L
Sbjct: 660 SL 661



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/561 (28%), Positives = 277/561 (49%), Gaps = 19/561 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           +LGE  E      L  QM+ E  V C+   + ++I  Y   G  E A K+  R+RE G  
Sbjct: 165 RLGEAEE------LFAQMEAERSVPCAYA-YNTMIMGYGSAGRFEDAYKLLERLRERGCI 217

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P+V  +N IL  L  + +      ++  MK+D  EPN  TYNI++  LC   RV+ AY++
Sbjct: 218 PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRI 276

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVS--VYNALINGLCK 177
           L EM +    P+ ++   +V  +CK  ++EEA    E A + G       Y +LI+GL K
Sbjct: 277 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 336

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           + +++EA+ L  +M+D G + N + Y+++I +    G  E    +  ++  RGC P++  
Sbjct: 337 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTL 396

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
             + +      G   +   ++  +   GFLP+V +YS LIHGL   G   E  ++ + M+
Sbjct: 397 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 456

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +     +   Y+A++DGF K+G +  A +I   M      P V  Y  +V  L + +   
Sbjct: 457 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 516

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A+ L E+   +    N V +++ I G    GR+D A  +L++M +    PN+ T+N LL
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L++   + EA      +++     N  TY+ +++G+CR     +AF     M  +G  
Sbjct: 577 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 636

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T+  +I    K G + +A  L +R +  G   PD  S+ +L+ G+ N+    EA+ 
Sbjct: 637 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALIEGMSNANRAMEAYQ 695

Query: 538 YLQKMLNEGICPNFATWNVLV 558
                L+   C    +WN LV
Sbjct: 696 TTVYQLSSSSC----SWNFLV 712



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 283/551 (51%), Gaps = 12/551 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +++++K      +  V I  +   RR    E+AL++  +++E G +  V ++  ++ AL 
Sbjct: 35  VMRRLKFRPAFSAYTVLIGALAEARR---PERALELLRQMQEVGYEVGVHLFTTLVRALA 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E + +    +   +K   +EP++  YN+ +    K   VD A K   E+  +G  PD V
Sbjct: 92  REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDV 151

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           SYT+++  +CK G++ EA EL  +  +  SV     YN +I G     + E+A+ LL  +
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 211

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +RG  P+V+++++I++ L     V+ +L +  ++  +   PN  ++  ++    LGGR 
Sbjct: 212 RERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRV 270

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  + + M      PN++  + ++  LC    ++EA  +     +  C P+  TY +L
Sbjct: 271 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 330

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A +++ +M+  G + N V YT +++    +      H + +++    C
Sbjct: 331 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC 390

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    NT++  +   G V+    + + ++ Y  LP++ +Y+ L+ GL +  + +E   
Sbjct: 391 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 450

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +   +++ G  L+   YN ++ G C++G V +A+++L +M  +  +    T+  I+    
Sbjct: 451 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 510

Query: 492 KQGKVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           K  +++ A  L +  +  G E N  ++ Y+SL+ G    G + EA++ L++M+ +G+ PN
Sbjct: 511 KIDRLDEAYMLFEEAKSKGIELN--VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568

Query: 551 FATWNVLVRSL 561
             TWN L+ +L
Sbjct: 569 VYTWNSLLDAL 579



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 225/481 (46%), Gaps = 8/481 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR----- 160
           L  AL +  R+D A   +  M      P   +YT ++ ++ +  + E A EL  +     
Sbjct: 16  LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 75

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           +  GV ++  L+  L +E ++ +A  L+ E+    ++P+++ Y+  I      GNV+ + 
Sbjct: 76  YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAC 135

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
               ++  +G  P+  S+TS++      GR  EA +L+ +M  E  +P   AY+T+I G 
Sbjct: 136 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 195

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
            S G  ++A  +  ++ E  C P+V ++++++    K   +  A  ++  M  +   PN 
Sbjct: 196 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNS 254

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  ++ +LC      +A+ ++++M   +  PN +T N  +  LC   +++ A K+ + 
Sbjct: 255 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 314

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
             Q  C P+  TY  L+DGL +  +V EA+ L  ++   G   N V Y +++      G 
Sbjct: 315 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 374

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
             +  ++  +++  G K D    N  +    K G+V     + + IR  G + PD+ SY+
Sbjct: 375 KEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYG-FLPDVRSYS 433

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            L+ G+  +G  +E       M  +G   +   +N +V   F   G +   Y + + M  
Sbjct: 434 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDG-FCKSGKVHKAYEILEEMKE 492

Query: 581 K 581
           K
Sbjct: 493 K 493



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 36/202 (17%)

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           LPN     +L   L+R  R+ +A   V  + +   +     Y  ++  +  A     A +
Sbjct: 8   LPN-QACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG-----------------G 509
           LL +M   G ++    F  ++ A  ++G+V +A+ L+D ++G                 G
Sbjct: 67  LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFG 126

Query: 510 GEWN-----------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
              N                 PD +SYTS++W +C +G + EA     +M  E   P   
Sbjct: 127 KAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 186

Query: 553 TWNVLVRSLFSNLGHLGPVYIL 574
            +N ++   + + G     Y L
Sbjct: 187 AYNTMIMG-YGSAGRFEDAYKL 207


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/529 (28%), Positives = 267/529 (50%), Gaps = 16/529 (3%)

Query: 49  ALKMFYR---IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+ +F R   +    + P +  Y+ ++D         +       + R G      T++ 
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131

Query: 106 LLKALCKNNRVDGAYKL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---- 160
           LLKALC   R   A  + L  M   GC P+  SYT ++  +C   + ++A  L       
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191

Query: 161 ------FGSGVSVYNALINGLCKE-HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                 +   V  YN +INGL +E  +++ A+ L  +M+D+G+ P+V+TY++IIS+L   
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             ++ +  +L +M   G  PN  +  SLL GY   G+ ++A  ++ RM R+G  P+V  Y
Sbjct: 252 RAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTY 311

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TL+  LC NG   EA  +   M +    PN  TY  L+ G+A  G+L+    + + M+ 
Sbjct: 312 NTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVR 371

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           NG  P+   +  ++    ++     A  L  KM  +   P+TVT+   +  LC  G+VD 
Sbjct: 372 NGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDD 431

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM    ++      P+   +  L+ GL   ++  +A EL  E+   GI  N + +NT+L+
Sbjct: 432 AMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLN 491

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +C+ GMV  A  +   M+    + D IT+N +I  YC  GKV+ A +LL+ +   G   
Sbjct: 492 HLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG-VK 550

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           P+ ++Y +++ G C +G +++AF   ++M ++G+ P   T++ +++ LF
Sbjct: 551 PNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLF 599



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 255/527 (48%), Gaps = 12/527 (2%)

Query: 46  AEQALKMFYRI-----REFGLKPTVKIYNHILDALLAENR-FSMINPIYSNMKRDGMEPN 99
           ++QAL + + +        G  P V  YN +++ LL E R       ++  M   G+ P+
Sbjct: 178 SQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPD 237

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
           V TYN ++ AL K   +D A  +LV M   G  P+ +++ +++   C  G+  +A  +  
Sbjct: 238 VVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFK 297

Query: 160 RF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R         V  YN L+  LCK  +  EA  +   MV RG  PN  TY T++      G
Sbjct: 298 RMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEG 357

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           ++     +L  M   G  P+ + F  L+  Y   G+  +A  L+++M R+G  P+ V Y 
Sbjct: 358 SLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYG 417

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            ++  LC  G +D+A++   ++      P+   +  LI G         A ++   MI  
Sbjct: 418 IVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGR 477

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PN + +  ++  LC+  M  +A ++ + M   +   + +T+NT I G C  G+VD A
Sbjct: 478 GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEA 537

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            KLL+ M      PN  TYN +++G  +  R+++AF L  ++   G+   IVTY+TIL G
Sbjct: 538 AKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQG 597

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           + +A     A +L   M+  G K D  T+NII+   C+    ++A+++   +    +++ 
Sbjct: 598 LFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLY-LIDFHL 656

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  ++  ++  +   G   EA      +L  G+ PN  T+ ++++SL
Sbjct: 657 ENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSL 703



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 148/563 (26%), Positives = 260/563 (46%), Gaps = 41/563 (7%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L E  ++D   +L  QM  +G+S     + S+I++  +    ++A  +  R+ + G  P 
Sbjct: 213 LREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPN 272

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              +N +L    +  + +    ++  M RDG+EP+VFTYN L+  LCKN R   A K+  
Sbjct: 273 RITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFD 332

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEH 179
            M  +G  P++ +Y T++      G + +    L M   +G+     ++N LI    K  
Sbjct: 333 SMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHG 392

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K+++A  L  +M  +G++P+ +TY  ++ +LC VG V+ ++   G++   G  P+   F 
Sbjct: 393 KVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFR 452

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+ G     +  +A +L   MI  G  PN + ++TL++ LC  G +  A ++   M   
Sbjct: 453 NLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRV 512

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
               +V TY+ LIDG+   G +  A+++   M+ +G  PN V Y  M+   C+N     A
Sbjct: 513 DVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDA 572

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL  +MA +   P  VT++T ++G                                   
Sbjct: 573 FSLFRQMASKGVNPGIVTYSTILQG----------------------------------- 597

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L +  R   A EL   + K GI+ +I TYN IL G+C+     +A ++   + +    L+
Sbjct: 598 LFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLE 657

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             TFNI+I A  K G+ + A  L   +   G   P++++Y  ++  +   G ++E     
Sbjct: 658 NRTFNIMIDALLKGGRHDEAKDLFASLLARG-LVPNVVTYWLMMKSLIEQGLLEELDDLF 716

Query: 540 QKMLNEGICPNFATWNVLVRSLF 562
             +   G   N    N LV  L 
Sbjct: 717 LSLEKNGCTANSRMLNALVGKLL 739



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 234/474 (49%), Gaps = 11/474 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           + ++M  +GV      + +++    + G + +A K+F  + + G KP    Y  +L    
Sbjct: 295 VFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYA 354

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E     ++ +   M R+G++P+ + +NIL+    K+ +VD A  L  +M  +G  PD V
Sbjct: 355 TEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTV 414

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWLL 188
           +Y  ++ ++C +G+V++A     +FG  +S        V+  LI+GLC   K ++A  L 
Sbjct: 415 TYGIVMDALCMVGKVDDA---MAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELA 471

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM+ RGI PN I ++T+++ LC  G V  +  I   M       ++ ++ +L+ GY L 
Sbjct: 472 VEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLH 531

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  EA+ L   M+ +G  PN V Y+T+I+G C NG +++A S+  QM      P + TY
Sbjct: 532 GKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTY 591

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S ++ G  +A     A +++  MI +G   ++  Y  ++  LCQNN    A  + + +  
Sbjct: 592 STILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYL 651

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            +      TFN  I  L   GR D A  L   +     +PN+ TY  ++  L+    ++E
Sbjct: 652 IDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEE 711

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             +L   +EK G   N    N ++  + + G V +A   L K+      L+A T
Sbjct: 712 LDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEAST 765



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 177/427 (41%), Gaps = 75/427 (17%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           + +LL  M   G+     +F  +I +Y + G  + A+ +F ++R  GL P    Y  ++D
Sbjct: 362 MHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMD 421

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           AL    +       +  +  +G+ P+   +  L+  LC  ++ D A +L VEM  +G  P
Sbjct: 422 ALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICP 481

Query: 134 DAVSYTTIVSSICKLGQVEEAR---ELAMRFG---------------------------- 162
           + + + T+++ +CK G V  A+   +L +R                              
Sbjct: 482 NNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLL 541

Query: 163 -----SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-- 211
                 GV      YN +ING CK  +IE+AF L  +M  +G++P ++TYSTI+  L   
Sbjct: 542 EGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601

Query: 212 --------------------DVGN-------------VETSLGILGQMFVRGCNPNIHSF 238
                               D+G               + +L I   +++   +    +F
Sbjct: 602 RRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTF 661

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++   L GGR  EA DL+  ++  G +PNVV Y  ++  L   G ++E   +   +E+
Sbjct: 662 NIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEK 721

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           N C  N    +AL+    + G +  A    +++  N  S        +V ++        
Sbjct: 722 NGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVLLVSSGKYDQH 781

Query: 359 AHSLIEK 365
            +++ EK
Sbjct: 782 INAIPEK 788



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 5/157 (3%)

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           F  +  + +  +  N++TY+ ++    R G +  AF  LG+++  G   +AITF+ ++ A
Sbjct: 76  FRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKA 135

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML-----N 544
            C + + + A+ +  R        P++ SYT LL G+C+    Q+A   L  M+      
Sbjct: 136 LCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTR 195

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G  P+  ++N ++  L      L   Y L D M ++
Sbjct: 196 GGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQ 232


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 287/602 (47%), Gaps = 47/602 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+  G   +   +  +I+   + G   +AL+++ R+   GLKP++K Y+ ++ AL 
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALG 238

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    M+  +   M+  G+ PNV+T+ I ++ L +  ++D AY++   M ++GC PD V
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIE--EAFWLLC 189
           +YT ++ ++C  GQ+E A+EL ++  +        +Y  L++       ++  + FW   
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW--S 356

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M   G  P+V+T++ ++  LC   + + +      M  +G  PN+H++ +L+ G L  G
Sbjct: 357 QMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG 416

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A  L + M   G  P    Y T I     +G   +AV    +M+     PN+   +
Sbjct: 417 RIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACN 476

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           A +   A+ G L  A  ++N +  NG +P+ V Y  M+K   +     +A +L+ +M   
Sbjct: 477 ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            C P+ +  N+ I  L   GRVD A ++ D+MK  +  P + TYN LL GL +  RV++A
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   +       N +++NT+L   C+   V  A ++  KM +   K D +T+N +IY 
Sbjct: 597 IELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG------------------ 531
             K+ KVN+A     +++     +PD ++  +LL G+   G                   
Sbjct: 657 LIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 532 ------------------MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
                             M +A I+ ++++  GIC   +    LVR L  +   L    I
Sbjct: 715 VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774

Query: 574 LD 575
            D
Sbjct: 775 FD 776



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 285/638 (44%), Gaps = 81/638 (12%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             I+    LL  M+  GV  +   +I+ I+ + + G   +A++ F +++  G+ P +   N
Sbjct: 417  RIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACN 476

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
              L +L    R      +++ ++ +G+ P+  TYN+++K   K  +VD A  LL EM   
Sbjct: 477  ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
            GC PD +   +++ S+ K G+V+EA     R   M+    V  YN L++GL KE ++++A
Sbjct: 537  GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI--------- 235
              L   M+ +   PN I+++T++   C    VE +L +  +M V  C P++         
Sbjct: 597  IELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 236  --------HSF-----------------TSLLKGYLLGGRTHEA-SDLWNRMIREGFLPN 269
                    H+F                  +LL G +  G+  +A S   + M +  F  N
Sbjct: 657  LIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716

Query: 270  VVAYSTLIHGLCSNGSMDEAVSVSYQM------EENS----------------------- 300
               +  L+ G      MD+A+  + ++       E+S                       
Sbjct: 717  RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFD 776

Query: 301  -------CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
                     P + +Y+ LI    +      A  ++  M + GC+P+   +  ++ V  ++
Sbjct: 777  KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836

Query: 354  NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                +   L ++M    C P+ +T+N  I  L     +D A+     +   +  P   TY
Sbjct: 837  GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 414  NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
              L+DGL +V R++EA  L  E+   G + N   +N +++G  + G    A QL  +M+ 
Sbjct: 897  GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956

Query: 474  EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            EG + D  ++ I++   C  G+V+ A+   + ++  G  +PD I+Y  ++ G+  S  M+
Sbjct: 957  EGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG-LDPDFIAYNRIINGLGKSQRME 1015

Query: 534  EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
            EA     +M N GI P+  T+N    SL  NLG  G V
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYN----SLMLNLGLAGMV 1049



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 259/529 (48%), Gaps = 44/529 (8%)

Query: 48  QALKMFYRIREFGLKPTV----KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           +AL  FY I EF   PTV    +  N +L+ L   ++   +  ++  M++  +  ++ TY
Sbjct: 104 RALSYFYSISEF---PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTY 160

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
             + KAL     + G  + +               TT+++ + K G V  A         
Sbjct: 161 LTIFKALS----IRGGLRQM---------------TTVLNKMRKAGFVLNAYS------- 194

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               YN LI+ L +     EA  +   MV  G+ P++ TYS ++ +L    + E  + +L
Sbjct: 195 ----YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  PN+++FT  ++     G+  EA +++ RM  EG  P++V Y+ LI  LC+ 
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++ A  +  +M+ N   P+   Y  L+D F   G+L    + W++M ++G  P+VV +
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T +V VLC+   F +A +  + M  +   PN  T+NT I GL   GR++ A+KLLD M+ 
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P   TY   +D   +     +A E   +++  GI  NIV  N  L+ +   G + E
Sbjct: 431 VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSL 522
           A  +   +   G   D++T+N+++  Y K G+V+ A+ LL + IR G E  PD+I   SL
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE--PDVIVVNSL 548

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           +  +  +G + EA+    +M +  + P   T+N    +L S LG  G V
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYN----TLLSGLGKEGRV 593



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 149/612 (24%), Positives = 274/612 (44%), Gaps = 46/612 (7%)

Query: 5    LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
            L E   +   + +   ++  G++     +  ++  Y +VG  ++A+ +   +   G +P 
Sbjct: 482  LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 65   VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
            V + N ++D+L    R      ++  MK   + P V TYN LL  L K  RV  A +L  
Sbjct: 542  VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 125  EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
             M  K C+P+ +S+ T++   CK  +VE A ++      M     V  YN +I GL KE+
Sbjct: 602  SMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKEN 661

Query: 180  KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ-MFVRGCNPNIHSF 238
            K+  AFW   ++  + + P+ +T  T++  L   G +  ++ I    M+      N   +
Sbjct: 662  KVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFW 720

Query: 239  TSLLKGYLLGGRTHEA------------------------------SDLWNRMIREGFL- 267
              L+ G L+     +A                               +L+   I + F  
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTK 780

Query: 268  -----PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
                 P + +Y+ LI  L      ++A  +   M+   C P+  T++ L+    K+G + 
Sbjct: 781  KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKIT 840

Query: 323  GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
               +++  MIS  C P+ + Y  ++  L ++N   +A      +   +  P   T+   I
Sbjct: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900

Query: 383  KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
             GL   GR++ AM+L ++M  Y C PN   +N L++G  ++   + A +L   +   GI+
Sbjct: 901  DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 443  LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
             ++ +Y  ++  +C AG V EA     ++   G   D I +N II    K  ++  A+ L
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 503  LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR--S 560
             + +R  G   PD+ +Y SL+  +  +G +++A    +++   G+ P+  T+N L+R  S
Sbjct: 1021 YNEMRNRG-IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079

Query: 561  LFSNLGHLGPVY 572
            L  N  H   VY
Sbjct: 1080 LSENPEHAYTVY 1091



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/589 (25%), Positives = 259/589 (43%), Gaps = 77/589 (13%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++D    LL +M   G      V  S+I+S  + G  ++A +MF R+++  L PTV  YN
Sbjct: 522  QVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYN 581

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L  L  E R      ++ +M      PN  ++N LL   CKN+ V+ A K+  +M   
Sbjct: 582  TLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVM 641

Query: 130  GCAPDAVSYTTIVS---------------------------SICKL-------GQVEEAR 155
             C PD ++Y T++                            +IC L       GQ+ +A 
Sbjct: 642  DCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 156  ELA------MRFGSGVSVYNAL---------------------INGLCKE---------- 178
             +A      +RF    S +  L                     +NG+C+E          
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 179  ---HKIE-EAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
               HK E  A+ +  +   + GI P + +Y+ +I  L +V   E +  +   M   GC P
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 234  NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
            +  +F  LL  +   G+  E  +L+  MI     P+ + Y+ +I  L  + ++D+A+   
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 294  YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            Y +  +   P   TY  LIDG AK G L  A +++  M   GC PN   +  ++    + 
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 354  NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                 A  L ++M  E   P+  ++   +  LC  GRVD A+   +++K     P+   Y
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 414  NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            N +++GL +  R++EA  L  E+   GI  ++ TYN+++  +  AGMV +A ++  ++ +
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061

Query: 474  EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
             G + D  T+N +I  Y       +A  +   +   G  NP+I +Y  L
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG-CNPNIGTYAQL 1109


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
            mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 169/573 (29%), Positives = 284/573 (49%), Gaps = 42/573 (7%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            LL +MK   ++ S   +  +I+        ++A ++  ++   G+KP V +Y  ++ A +
Sbjct: 438  LLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYV 497

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             E+R+ M   +   M  +G+ P++F YN L+  LC+  +V+ A  LLV+MG KG  P+A 
Sbjct: 498  QESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAH 557

Query: 137  SYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            +Y   ++   K G+++ A R       SG+     +Y  LI G C      EA      M
Sbjct: 558  TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +++G+ P++  YS II SL   G  + ++G+  +    G  P++  + SL+ G+   G  
Sbjct: 618  LEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDI 677

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             +AS L++ M+  G  PN+V Y+TLI+GLC  G + +A  +  ++EE    P+V TYS +
Sbjct: 678  EKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTI 737

Query: 312  IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            IDG+ K+GNL  A ++++ MIS G SP+   Y  ++    +     +A SL  + A +  
Sbjct: 738  IDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQKS 796

Query: 372  PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
              +   FN+ I   C  G+V  A +L D M   +  PNI TY  L+D   +   ++EA +
Sbjct: 797  VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQ 856

Query: 432  LVTEIEKCGIQLNIVTYNTIL------------------------------HGV-----C 456
            L  ++E   I  N +TY ++L                              +GV     C
Sbjct: 857  LFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYC 916

Query: 457  RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            + G  +EA +LL K L+EG KL+   F+ +I+  CK+ +++  ++LL  + G  E +   
Sbjct: 917  KEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM-GKEELSLSS 975

Query: 517  ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             +  +LL G   SG   EA   L  M   G  P
Sbjct: 976  KTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008



 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 257/535 (48%), Gaps = 7/535 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF   I+ +R +G   +A  +F      G  PT+   N+++  LL  N   +   +Y +M
Sbjct: 174 VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSM 233

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
               + P+V+TY  ++KA CK   V     +L EM  K C P+  +Y   +  +C+ G V
Sbjct: 234 VEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAV 292

Query: 152 EEA---RELAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA   ++L M  G G     Y  L++G CK+ + +EA  +   M   G++PN  TY+ +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      GN+E +L I  +M  RG   N+ ++ +++ G    G   +A  L+N M+  G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+   Y+ LI G   +  M +A  +  +M+     P+  TYS LI G   + +L  A++
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + ++MI NG  PNV  Y  ++K   Q + +  A  L++ M      P+   +N  I GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V+ A  LL  M +    PN  TY   ++   +   ++ A     ++   GI  N V
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y  ++ G C  G  VEA      ML +G   D   ++ II++  K GK   A+ +  + 
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              G   PD+  Y SL+ G C  G +++A     +ML+ GI PN   +N L+  L
Sbjct: 653 LKTGVV-PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706



 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 174/622 (27%), Positives = 282/622 (45%), Gaps = 80/622 (12%)

Query: 15  QYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           + +L +M+ E   C   +F   + I    + G  ++AL++   + E GL P    Y  ++
Sbjct: 262 KMVLSEMEKE---CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLV 318

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           D    + R      I+ +M   G+ PN FTY  L+    K   ++ A ++  EM  +G  
Sbjct: 319 DGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLK 378

Query: 133 PDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWL 187
            + V+Y  ++  I K G++ +A     E+ M         YN LI+G  K H + +A  L
Sbjct: 379 LNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACEL 438

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L EM  R + P+  TYS +IS LC   +++ +  +L QM   G  PN+  + +L+K Y+ 
Sbjct: 439 LAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             R   A +L   MI  G LP++  Y+ LI GLC    ++EA  +   M E    PN  T
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC---------------- 351
           Y A I+ ++K+G +  A + +  M+S+G  PN V YT ++K  C                
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 352 -------------------QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                              +N    +A  +  K       P+   +N+ I G C  G ++
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A +L D+M      PNI  YN L++GL ++  V +A EL  EIE+  +  ++VTY+TI+
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTII 738

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAI------------------------------- 481
            G C++G + EAF+L  +M+ +G   D                                 
Sbjct: 739 DGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG 798

Query: 482 ---TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
               FN +I ++CK GKV  A +L D +    +  P+I++YT L+     +  M+EA   
Sbjct: 799 SLSAFNSLIDSFCKHGKVIEARELFDDMVDK-KLTPNIVTYTILIDAYGKAEMMEEAEQL 857

Query: 539 LQKMLNEGICPNFATWNVLVRS 560
              M    I PN  T+  L+ S
Sbjct: 858 FLDMETRNIIPNTLTYTSLLLS 879



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/547 (28%), Positives = 274/547 (50%), Gaps = 7/547 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
            +M   G+  +   + ++I    + G   +A+ +F  +   GL+P    YN ++D  L  
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKS 429

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +  +    + + MK   + P+ FTY++L+  LC ++ +  A ++L +M   G  P+   Y
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 139 TTIVSSICKLGQVEEARE-LAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T++ +  +  + E A E L +   +GV      YN LI GLC+  K+EEA  LL +M +
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 549

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +GI PN  TY   I+     G ++ +      M   G  PN   +T L+KG+   G T E
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A   +  M+ +G +P++ AYS +IH L  NG   EA+ V  +  +    P+V  Y++LI 
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF K G++  ASQ+++ M+ NG +PN+V Y  ++  LC+     +A  L +++  ++  P
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP 729

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + VT++T I G C  G +  A KL D+M      P+   Y  L+DG  +   +++A  L 
Sbjct: 730 DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E ++  +  ++  +N+++   C+ G V+EA +L   M+ +    + +T+ I+I AY K 
Sbjct: 790 HEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 848

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             +  A QL   +       P+ ++YTSLL      G   +     + M   GI  +   
Sbjct: 849 EMMEEAEQLFLDMETRN-IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 907

Query: 554 WNVLVRS 560
           + V+  +
Sbjct: 908 YGVMASA 914



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 164/605 (27%), Positives = 285/605 (47%), Gaps = 44/605 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  + +  E+     L  +M + G+      +  +I+ Y +     +A ++   ++   
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA----------- 109
           L P+   Y+ ++  L   +     N +   M R+G++PNVF Y  L+KA           
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 110 ------------------------LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                   LC+  +V+ A  LLV+MG KG  P+A +Y   ++  
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 146 CKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            K G+++ A R       SG+     +Y  LI G C      EA      M+++G+ P++
Sbjct: 567 SKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI 626

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             YS II SL   G  + ++G+  +    G  P++  + SL+ G+   G   +AS L++ 
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G  PN+V Y+TLI+GLC  G + +A  +  ++EE    P+V TYS +IDG+ K+GN
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L  A ++++ MIS G SP+   Y  ++    +     +A SL  + A +    +   FN+
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLSAFNS 805

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I   C  G+V  A +L D M   +  PNI TY  L+D   +   ++EA +L  ++E   
Sbjct: 806 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 865

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I  N +TY ++L    + G   +   L   M   G   DAI + ++  AYCK+GK   A+
Sbjct: 866 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 925

Query: 501 QLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           +LL++ +  G +   D+  + +L++ +C    +      L +M  E +  +  T N L+ 
Sbjct: 926 KLLNKSLVEGIKLEDDV--FDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983

Query: 560 SLFSN 564
             + +
Sbjct: 984 GFYKS 988



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 208/436 (47%), Gaps = 6/436 (1%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            EI   +   + M   G+  +  ++  +I  +  VG   +AL  F  + E GL P ++ Y+
Sbjct: 571  EIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYS 630

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             I+ +L    +      ++    + G+ P+VF YN L+   CK   ++ A +L  EM + 
Sbjct: 631  AIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN 690

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
            G  P+ V Y T+++ +CKLG+V +AREL            V  Y+ +I+G CK   + EA
Sbjct: 691  GINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEA 750

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
            F L  EM+ +GI P+   Y  +I      GN+E +L +  +   +    ++ +F SL+  
Sbjct: 751  FKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDS 809

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            +   G+  EA +L++ M+ +   PN+V Y+ LI        M+EA  +   ME  +  PN
Sbjct: 810  FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              TY++L+  + + GN      ++  M + G + + +AY  M    C+     +A  L+ 
Sbjct: 870  TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN 929

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            K   E        F+  I  LC   ++   ++LL +M + E   +  T N LL G  +  
Sbjct: 930  KSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSG 989

Query: 425  RVKEAFELVTEIEKCG 440
               EA +++  +++ G
Sbjct: 990  NEDEASKVLGVMQRLG 1005



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 202/407 (49%), Gaps = 3/407 (0%)

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
           GS ++V++  I+       + EA  +    +  G  P +I  + ++  L     +     
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWK 228

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           + G M      P+++++T+++K +   G   +   + + M +E   PN+  Y+  I GLC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLC 287

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G++DEA+ V   M E    P+  TY+ L+DGF K      A  I+  M S+G +PN  
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++    +     +A  + ++M       N VT+N  I G+   G +  AM L ++M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                 P+  TYN L+DG L+ + + +A EL+ E++   +  +  TY+ ++ G+C +  +
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A ++L +M+  G K +   +  +I AY ++ +   AI+LL  +   G   PD+  Y  
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL-PDLFCYNC 526

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           L+ G+C +  ++EA + L  M  +GI PN  T+   + +L+S  G +
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI-NLYSKSGEI 572



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 2/347 (0%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N+  F   +  + + G  +EAS ++   I EGF P ++  + L+  L     M     V 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M E    P+V TY+ +I    K G+++    + + M    C PN+  Y   +  LCQ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  + + M  +   P+  T+   + G C   R   A  + + M      PN  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+DG ++   ++EA  +  E+   G++LN+VTYN ++ G+ +AG + +A  L  +ML+
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G + D  T+N++I  Y K   +  A +LL  ++   +  P   +Y+ L+ G+C+S  +Q
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK-ARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +A   L +M+  G+ PN   +  L+++      +   + +L  ++AN
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 157/359 (43%), Gaps = 39/359 (10%)

Query: 25   GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
            GV     ++ S+I+ + + G  E+A +++  +   G+ P + +YN +++ L      +  
Sbjct: 656  GVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKA 715

Query: 85   NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV-------- 136
              ++  ++   + P+V TY+ ++   CK+  +  A+KL  EM +KG +PD          
Sbjct: 716  RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775

Query: 137  --------------------------SYTTIVSSICKLGQVEEAREL-----AMRFGSGV 165
                                      ++ +++ S CK G+V EAREL       +    +
Sbjct: 776  CGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 835

Query: 166  SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
              Y  LI+   K   +EEA  L  +M  R I PN +TY++++ S   +GN    + +   
Sbjct: 836  VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895

Query: 226  MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
            M  RG   +  ++  +   Y   G++ EA  L N+ + EG       +  LI  LC    
Sbjct: 896  MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQ 955

Query: 286  MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +   + +  +M +     +  T + L+ GF K+GN   AS++   M   G  P  ++ T
Sbjct: 956  ISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 1014



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 125/266 (46%), Gaps = 6/266 (2%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L  +M  +G+S    ++  +I+   + G  E+AL +F+  ++  +  ++  +N ++D+  
Sbjct: 753  LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFC 811

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               +      ++ +M    + PN+ TY IL+ A  K   ++ A +L ++M  +   P+ +
Sbjct: 812  KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871

Query: 137  SYTTIVSSICKLGQ----VEEARELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            +YT+++ S  ++G     +   +++  R        Y  + +  CKE K  EA  LL + 
Sbjct: 872  TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  GI      +  +I  LC    + T L +L +M     + +  +  +LL G+   G  
Sbjct: 932  LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 991

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLI 277
             EAS +   M R G++P  ++ +  I
Sbjct: 992  DEASKVLGVMQRLGWVPTSLSLTDSI 1017



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 54/269 (20%)

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP-----------------NTVTFNTFIKG 384
           +Y+ +   LC + + HQA +++EK+     PP                 N   F+ FI  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 385 LCGCGRVDWAM-----------------------------------KLLDQMKQYECLPN 409
               G ++ A                                    K+   M + + +P+
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           + TY  ++    +V  V +   +++E+EK   + N+ TYN  + G+C+ G V EA ++  
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M+ +G   D  T+ +++  +CKQ +   A  + + +   G  NP+  +YT+L+ G    
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG-LNPNRFTYTALIDGFIKE 359

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G ++EA     +M+  G+  N  T+N ++
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMI 388



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 63/128 (49%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L + M+  G++C    +  + ++Y + G + +ALK+  +    G+K    +++ ++  L 
Sbjct: 892  LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 951

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             E + S +  + S M ++ +  +  T N LL    K+   D A K+L  M   G  P ++
Sbjct: 952  KEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL 1011

Query: 137  SYTTIVSS 144
            S T  +S+
Sbjct: 1012 SLTDSIST 1019


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/555 (28%), Positives = 273/555 (49%), Gaps = 15/555 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++    LL +M    +  +  V+  +IN Y ++G   +A  + + +   G++P    YN
Sbjct: 364 RMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYN 423

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D    +   +     Y+ M R+G      TYN LLK  C    +D A +L   M  K
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G AP+ +S +T++    K G+ E+A       LA       + +N +INGLCK  ++ EA
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+ +M      P++ITY T+ S  C +G+++ +  IL ++   G  P I  F SL+ G
Sbjct: 544 EELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITG 603

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           + +  +  + +D+   M   G  PN VAY  LI G C  G +  A ++  +M E    PN
Sbjct: 604 HFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPN 663

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +   S+L+  F + G    A+ +   ++     P++ A    +          +  + I+
Sbjct: 664 LFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIG---------KVANFID 714

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +A  N     + +N  I GLC  GR++ A  LL  +K    + +  TY+ L+ G     
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V  AF+L   +   G+  NIVTYN++++G+C++G +  A  L  K+  +G   +AIT+N
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN 834

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  +CK G +  A +L  R+   G  +P + +Y+ L+ G+C  G M+EA   L +M+ 
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEEG-IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIE 893

Query: 545 EGICPNFATWNVLVR 559
             + PN+ T+  L++
Sbjct: 894 NNVDPNYVTYWTLIQ 908



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 279/636 (43%), Gaps = 101/636 (15%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S S   F  ++ +    G  + AL++F  +R  G + +++  N IL+ L           
Sbjct: 170 SFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVA 229

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++  M+R G  P+ FT  I+ KA CK   V  A + + EM   G   + V+Y  +++  C
Sbjct: 230 VFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYC 289

Query: 147 KLGQVEEAR---------------------------ELAMRFGSGV-------------- 165
           ++GQ  +AR                           E  M    GV              
Sbjct: 290 EVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDE 349

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           +V+ A+ING C+  ++E+A  LL EMVD  +  N+  Y+ +I+  C +G +  +  IL +
Sbjct: 350 AVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHE 409

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   G  P+ +S+ SL+ GY   G  ++A + +N M+R GF    + Y+ L+ G CS GS
Sbjct: 410 MTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGS 469

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D+A+ + + M +    PN  + S L+DGF K+G    A  +W   ++ G + N   +  
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNT 529

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+     +A  L++KM    CPP+ +T+ T   G C  G +D A ++L++++   
Sbjct: 530 VINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLG 589

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P I  +N L+ G     +  +  +++ E+   G+  N V Y  ++ G C+ G +  A+
Sbjct: 590 FAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAY 649

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA-------------------------- 499
            L  +M+ +G   +    + ++  + ++GK + A                          
Sbjct: 650 NLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKV 709

Query: 500 IQLLDRIRGGGE------WN----------------------------PDIISYTSLLWG 525
              +D + GG        WN                             D  +Y+SL+ G
Sbjct: 710 ANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHG 769

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              SG +  AF     ML+ G+ PN  T+N L+  L
Sbjct: 770 CSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/643 (24%), Positives = 297/643 (46%), Gaps = 73/643 (11%)

Query: 9   CEIDGVQYLLQ---QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C++ GV + L+   +M   GV  +   + +V+N Y  VG    A +M   +   G  P +
Sbjct: 254 CKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNI 313

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDG-MEPNVFTYNILLKALCKNNRVDGAYKLLV 124
             Y  ++     E        +   ++++  +  +   +  ++   C+  R++ A +LL 
Sbjct: 314 VTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLN 373

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALINGLCKE 178
           EM +     +   Y  +++  CKLG++ EA  +     +GV V      YN+L++G CK+
Sbjct: 374 EMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM-TGVGVRPDTYSYNSLVDGYCKK 432

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             + +AF     M+  G     +TY+ ++   C +G+++ +L +   M  +G  PN  S 
Sbjct: 433 GLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISC 492

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           ++LL G+   G+T +A +LW   +  G   N   ++T+I+GLC    M EA  +  +M++
Sbjct: 493 STLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQ 552

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNR---------------------------- 330
             CPP++ TY  L  G+ K G++  AS+I N                             
Sbjct: 553 WRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGK 612

Query: 331 -------MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
                  M + G SPN VAY  ++   C+    H A++L  +M  +   PN    ++ + 
Sbjct: 613 VNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVS 672

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITT--------------------------YNELL 417
                G+ D A  +L  +   + +P+I+                           +N ++
Sbjct: 673 CFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVI 732

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL ++ R+++A  L+ +++  G   +  TY++++HG   +G V  AF L   ML  G  
Sbjct: 733 FGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLT 792

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T+N +IY  CK G+++ A+ L  ++   G  +P+ I+Y +L+   C  G + EAF 
Sbjct: 793 PNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKG-ISPNAITYNTLIDKHCKDGYITEAFK 851

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             Q+M+ EGI P   T+++L+  L +       + +LD ++ N
Sbjct: 852 LKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIEN 894



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/467 (24%), Positives = 231/467 (49%), Gaps = 37/467 (7%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G + +   + +++  +  +G  + AL++++ + + G+ P     + +LD      +    
Sbjct: 449 GFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKA 508

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             ++      G+  N  T+N ++  LCK  R+  A +L+ +M    C PD ++Y T+ S 
Sbjct: 509 LNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSG 568

Query: 145 ICKLGQVEEARELA-----MRFGSGVSVYNALING--LCKEH-KIEEAFWLLCEMVDRGI 196
            CK+G ++ A  +      + F   +  +N+LI G  + K+H K+ +   +L EM +RG+
Sbjct: 569 YCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVND---ILFEMSNRGL 625

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PN + Y  +I+  C  G++ T+  +  +M  +G  PN+   +SL+  +   G+  EA+ 
Sbjct: 626 SPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANL 685

Query: 257 LWNRMIREGFLPNVVA--------------------------YSTLIHGLCSNGSMDEAV 290
           +   ++    +P++ A                          ++ +I GLC  G +++A 
Sbjct: 686 VLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAK 745

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           ++   +++     +  TYS+LI G + +G +  A  + + M+S G +PN+V Y  ++  L
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGL 805

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C++    +A SL +K+  +   PN +T+NT I   C  G +  A KL  +M +    P +
Sbjct: 806 CKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTV 865

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            TY+ L++GL     ++EA +L+ ++ +  +  N VTY T++ G  R
Sbjct: 866 FTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVR 912



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 188/400 (47%), Gaps = 12/400 (3%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           IE++ E  E      L+ +MK          + ++ + Y ++G  ++A ++   +   G 
Sbjct: 537 IERMPEAEE------LVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            PT++ +N ++       +   +N I   M   G+ PN   Y  L+   CK   +  AY 
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKI 181
           L +EM  KG  P+    +++VS   + G+ +EA  L ++   G  +   +     +  K+
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEA-NLVLQNLVGTDMIPDISAPRLEIGKV 709

Query: 182 EEAFWLLCEMVDRGIDPNV-ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                   + V  G   +  I ++ +I  LC +G +E +  +L  +  +G   +  +++S
Sbjct: 710 AN----FIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSS 765

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G    A DL + M+  G  PN+V Y++LI+GLC +G +  AVS+  ++    
Sbjct: 766 LIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKG 825

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN  TY+ LID   K G +  A ++  RMI  G  P V  Y+ ++  LC      +A 
Sbjct: 826 ISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAI 885

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
            L+++M   N  PN VT+ T I+G   C  VD  +  LDQ
Sbjct: 886 KLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/450 (22%), Positives = 195/450 (43%), Gaps = 41/450 (9%)

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           E+   F    + ++ L+  L    +++ A  +  EM   G   ++ + ++I++ L   G+
Sbjct: 164 EVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGD 223

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  ++ +  QM   G  P+  +   + K Y        A +    M + G   N+VAY  
Sbjct: 224 LGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHA 283

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS-------------------------- 309
           +++G C  G  ++A  +   +      PN+ TY+                          
Sbjct: 284 VMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNK 343

Query: 310 ----------ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
                     A+I+G+ + G +  A+++ N M+ +    N+  Y  M+   C+     +A
Sbjct: 344 QLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEA 403

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           H+++ +M      P+T ++N+ + G C  G ++ A +  + M +        TYN LL G
Sbjct: 404 HNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKG 463

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
              +  + +A  L   + K GI  N ++ +T+L G  ++G   +A  L  + L  G   +
Sbjct: 464 FCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKN 523

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFI 537
             TFN +I   CK  ++  A +L+D+++   +W   PDII+Y +L  G C  G M  A  
Sbjct: 524 TTTFNTVINGLCKIERMPEAEELVDKMK---QWRCPPDIITYRTLFSGYCKIGDMDRASR 580

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            L ++ N G  P    +N L+   F    H
Sbjct: 581 ILNELENLGFAPTIEFFNSLITGHFIAKQH 610



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 150/314 (47%), Gaps = 3/314 (0%)

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +  ++  L+  L + G +D A+ V  +M    C  ++ + +++++  A+ G+L     ++
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            +M   G  P+      M K  C+      A   +E+M       N V ++  + G C  
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVT 447
           G+ + A ++LD +      PNI TY  L+ G      ++EA  +V EI K   + ++   
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           +  +++G C+ G + +A +LL +M+    +++   +NI+I  YCK G++  A  +L  + 
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT 411

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
           G G   PD  SY SL+ G C  G M +AF     ML  G      T+N L++  F +LG 
Sbjct: 412 GVGV-RPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKG-FCSLGS 469

Query: 568 LGPVYILDDIMANK 581
           +     L  +M  K
Sbjct: 470 IDDALRLWFLMLKK 483



 Score = 42.0 bits (97), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 26/117 (22%), Positives = 57/117 (48%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  E+     L +++  +G+S +   + ++I+ + + G   +A K+  R+ E G
Sbjct: 801 LIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEG 860

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           + PTV  Y+ +++ L  +        +   M  + ++PN  TY  L++   +   VD
Sbjct: 861 IHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVD 917


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 249/468 (53%), Gaps = 16/468 (3%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           L+++LC   R   A + L   GN   A   V Y  +V+  C++GQVE AR LA       
Sbjct: 58  LIRSLCVAGRTADAVRALDAAGN---AAGVVDYNAMVAGYCRVGQVEAARRLAAAVPVPP 114

Query: 166 SVYN--ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           + Y    ++ GLC   +I +A  +L EM  R   P    Y  II S C  G   ++L +L
Sbjct: 115 NAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVL 174

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             +  +G   +  +   ++      G   E  ++  ++   G   ++V+Y+ ++ GLC+ 
Sbjct: 175 EALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAA 234

Query: 284 GS-------MDEAVSVS---YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
                    MDE V V     QM ++ C P++  Y+ +IDG  K G+   A++I +RM S
Sbjct: 235 KRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPS 294

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  PNVV Y  ++K +C  + + +A  L+ +M  +NCP + VTFN  +   C  G VD 
Sbjct: 295 YGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDR 354

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
            ++LL+QM ++ C+P++ TY  +++G  +   + EA  L+  +  CG + N ++Y  +L 
Sbjct: 355 VIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLK 414

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C     V+A +L+ +M+ +G   + +TFN II   CK+G V  AI+LL ++   G  N
Sbjct: 415 GLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG-CN 473

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PD+ISY++++ G+  +G  +EA   L  M+N+GI PN  T++ +  +L
Sbjct: 474 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFAL 521



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 257/483 (53%), Gaps = 16/483 (3%)

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           + PN +TY  +++ LC   R+  A  +L EM ++ C P    Y  I+ S C+ G    A 
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171

Query: 155 RELAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           R L      G ++     N +IN +C +  ++E   +L ++   G + ++++Y+ ++  L
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231

Query: 211 CDV---GNVETSLG-------ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           C     G+VE  +         L QM   GC P+I  + +++ G    G    A+++ +R
Sbjct: 232 CAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSR 291

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M   G  PNVV Y+T++ G+CS    ++A  +  +M + +CP +  T++ L+D F + G 
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +    ++  +M+ +GC P+V+ YT ++   C+  +  +A  L++ M    C PNT+++  
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            +KGLC   R   A +L+ +M Q  CLPN  T+N +++ L +   V++A EL+ ++   G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              ++++Y+T++ G+ +AG   EA +LL  M+ +G   + IT++ + +A  ++G+++  I
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVI 531

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           Q+ D I+       D + Y +++  +C       A  +L  M++ G  PN +T+  L++ 
Sbjct: 532 QMFDNIQDA-TIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKG 590

Query: 561 LFS 563
           L S
Sbjct: 591 LAS 593



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 271/540 (50%), Gaps = 24/540 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++  Y RVG  E A ++   +    + P    Y  ++  L    R +    +   M   
Sbjct: 89  AMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSR 145

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
              P    Y++++++ C++     A ++L  +  KG   D  +   ++++IC  G V+E 
Sbjct: 146 SCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEG 205

Query: 155 RELAMR---FG--SGVSVYNALINGLCKEHK---IEE-------AFWLLCEMVDRGIDPN 199
            E+  +   FG  + +  YNA++ GLC   +   +EE           L +M   G  P+
Sbjct: 206 LEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPD 265

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +  Y+TII  +C  G+ E +  IL +M   G  PN+  + ++LKG     R  +A +L  
Sbjct: 266 IRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLT 325

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M ++    + V ++ L+   C NG +D  + +  QM E+ C P+V TY+ +I+GF K G
Sbjct: 326 EMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEG 385

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A  +   M S GC PN ++YT ++K LC    +  A  L+ +M  + C PN VTFN
Sbjct: 386 LIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFN 445

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I  LC  G V+ A++LL QM    C P++ +Y+ ++DGL +  + +EA EL+  +   
Sbjct: 446 TIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINK 505

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  N++TY+++   + R G + +  Q+   +     + DA+ +N +I + CK+ + + A
Sbjct: 506 GITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLA 565

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           I  L  +   G   P+  +YT+L+ G+ + G + EA    Q +L+E +C   A    L R
Sbjct: 566 IDFLAYMVSNG-CMPNESTYTALIKGLASEGLLCEA----QDLLSE-LCSRRAVRKHLTR 619



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 219/435 (50%), Gaps = 15/435 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ +  +G +   G    VIN+    G  ++ L+M  ++  FG +  +  YN +L  L 
Sbjct: 173 VLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC 232

Query: 77  AENRFS----------MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           A  R+            ++   S M + G  P++  Y  ++  +CK    + A ++L  M
Sbjct: 233 AAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRM 292

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKI 181
            + G  P+ V Y T++  IC   + E+A EL               +N L++  C+   +
Sbjct: 293 PSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLV 352

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +    LL +M++ G  P+VITY+T+I+  C  G ++ ++ +L  M   GC PN  S+T +
Sbjct: 353 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIV 412

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           LKG     R  +A +L +RMI++G LPN V ++T+I+ LC  G +++A+ +  QM  N C
Sbjct: 413 LKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGC 472

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P++ +YS +IDG  KAG    A ++ N MI+ G +PNV+ Y+ M   L +     +   
Sbjct: 473 NPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ 532

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           + + +       + V +N  I  LC     D A+  L  M    C+PN +TY  L+ GL 
Sbjct: 533 MFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLA 592

Query: 422 RVNRVKEAFELVTEI 436
               + EA +L++E+
Sbjct: 593 SEGLLCEAQDLLSEL 607



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 189/362 (52%), Gaps = 5/362 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+  V   L QM   G +    ++ ++I+   + G  E A ++  R+  +GLKP V  YN
Sbjct: 246 EMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYN 305

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  + + +R+     + + M +     +  T+NIL+   C+N  VD   +LL +M   
Sbjct: 306 TVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 365

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC PD ++YTT+++  CK G ++EA  L     S         Y  ++ GLC   +  +A
Sbjct: 366 GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDA 425

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+  M+ +G  PN +T++TII+ LC  G VE ++ +L QM V GCNP++ S+++++ G
Sbjct: 426 EELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDG 485

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+T EA +L N MI +G  PNV+ YS++   L   G +D+ + +   +++ +   +
Sbjct: 486 LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSD 545

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+A+I    K      A      M+SNGC PN   YT ++K L    +  +A  L+ 
Sbjct: 546 AVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLS 605

Query: 365 KM 366
           ++
Sbjct: 606 EL 607



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 185/371 (49%), Gaps = 17/371 (4%)

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           S +I SLC  G    ++  L      G    +  + +++ GY   G+   A  L   +  
Sbjct: 56  SALIRSLCVAGRTADAVRALD---AAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV-- 110

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
               PN   Y  ++ GLC  G + +A++V  +M   SC P    Y  +I+   ++G    
Sbjct: 111 -PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A ++   + + G + +      ++  +C      +   ++ K+    C  + V++N  +K
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 384 GLCGCGR-------VDWAMKL---LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           GLC   R       +D  +K+   L QM Q+ C P+I  Y  ++DG+ +    + A E++
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           + +   G++ N+V YNT+L G+C A    +A +LL +M  +   LD +TFNI++  +C+ 
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G V+  I+LL+++   G   PD+I+YT+++ G C  G + EA + L+ M + G  PN  +
Sbjct: 350 GLVDRVIELLEQMLEHG-CMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408

Query: 554 WNVLVRSLFSN 564
           + ++++ L S 
Sbjct: 409 YTIVLKGLCST 419



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 75/155 (48%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+QM V G +     + +VI+   + G  E+AL++   +   G+ P V  Y+ +  AL 
Sbjct: 463 LLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALA 522

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R   +  ++ N++   +  +   YN ++ +LCK    D A   L  M + GC P+  
Sbjct: 523 REGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNES 582

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNAL 171
           +YT ++  +   G + EA++L     S  +V   L
Sbjct: 583 TYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHL 617



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 61/129 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + +    LL  M  +G++ +   + S+  +  R G  ++ ++MF  I++  
Sbjct: 482 VIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDAT 541

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L       +     + M  +G  PN  TY  L+K L     +  A 
Sbjct: 542 IRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQ 601

Query: 121 KLLVEMGNK 129
            LL E+ ++
Sbjct: 602 DLLSELCSR 610


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 275/551 (49%), Gaps = 6/551 (1%)

Query: 12   DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
            D ++   + +  E + C++  F  ++ S  ++G       M+ +I + G++P +   N +
Sbjct: 929  DAIKLFDRSLCSEPMPCTD-TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNIL 987

Query: 72   LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
            +    +         ++    + G EP+  T   L+K +   N +  A +L  EM  KG 
Sbjct: 988  IHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGL 1047

Query: 132  APDAVSYTTIVSSICKLGQVEEARELAMRFGS----GVSVYNALINGLCKEHKIEEAFWL 187
              DA +Y  +++ +CK  +   A +L  +        V  Y  +I+ LCK+    EA  +
Sbjct: 1048 LGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDM 1107

Query: 188  LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
              EM+  GI P+V+ YS+++  LC  G ++ +L    +M  RG + +++++ SL+ G   
Sbjct: 1108 FSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSR 1167

Query: 248  GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             G   E +   N M+  GF P+   ++ LI GLC  G + EA  +   M      P++ T
Sbjct: 1168 AGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILT 1227

Query: 308  YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            Y+ L++G    G L  A++++  +   G   NV +Y  ++   C++    +A    E+M 
Sbjct: 1228 YNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMR 1287

Query: 368  FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
             +   P+TVT+NT I  LC  GRV  A KL  +M+       ++TY  LLDGL +   ++
Sbjct: 1288 PKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLE 1347

Query: 428  EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            EA +L   I+K   + NI  ++ +L G+CRAG + EA++   ++   G + D I +NI+I
Sbjct: 1348 EAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILI 1407

Query: 488  YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
               C +G ++ A++LL ++   G   PD I++  ++  +     + EA   L++M N   
Sbjct: 1408 NGLCNKGMLSEAVKLLWQMEEKG-CLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNF 1466

Query: 548  CPNFATWNVLV 558
             P+ A  ++L+
Sbjct: 1467 SPDEAVTSMLL 1477



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 253/547 (46%), Gaps = 9/547 (1%)

Query: 25   GVSCSEGVFISVINSYRRVGLAE--QALKMFYRIREFGLKPTVKIYNHILDALLAENRFS 82
            G   S   F   +    R G+ +   A+K+F R       P    +NH+L ++     +S
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 83   MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
             + P+Y  +   G++P+++T NIL+   C    V   + +      +G  PDAV+ TT+V
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 143  SSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
              +     + +A +L               Y  LINGLCK  K   A   L E +     
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAI-KLHEKMKGNCK 1082

Query: 198  PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
             +V TY  II +LC  G    +L +  +M   G  P++  ++SL+ G    GR  EA + 
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142

Query: 258  WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            +  M   G   +V  Y++LIHGL   G   E       M +    P+  T++ LIDG  K
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCK 1202

Query: 318  AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
             G +  A QI   M   G  P+++ Y  ++  LC       A  L E +A      N  +
Sbjct: 1203 EGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS 1262

Query: 378  FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            +N  I G C   ++D A +  ++M+     P+  TYN L+  L +  RV+ A +L  E++
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQ 1322

Query: 438  KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             CG  L + TY  +L G+C+ G + EA  L   +     K +   F+I++   C+ GK+ 
Sbjct: 1323 TCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLE 1382

Query: 498  NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
             A +  D I   G   PD I+Y  L+ G+CN G + EA   L +M  +G  P+  T+NV+
Sbjct: 1383 EAWKQFDEISKNG-LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 1441

Query: 558  VRSLFSN 564
            +++L   
Sbjct: 1442 IQNLLKE 1448



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 180/372 (48%), Gaps = 43/372 (11%)

Query: 32   VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            V+ S+++   R G  ++AL+ F  +   G+   V  YN ++  L     +  +    + M
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181

Query: 92   KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
               G  P+ FT+ IL+  LCK  +V  A ++L  M +KG  PD ++Y T+++ +C +GQ+
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQL 1241

Query: 152  EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            E+A +L            V  YN LING CK+ KI+EAF    EM  +G+ P+ +TY+T+
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301

Query: 207  ISSLCDVGNVETSLGILGQMFVRG-----------------------------------C 231
            I +LC  G V T+  +  +M   G                                    
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEH 1361

Query: 232  NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             PNI  F+ LL G    G+  EA   ++ + + G  P+ +AY+ LI+GLC+ G + EAV 
Sbjct: 1362 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 1421

Query: 292  VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
            + +QMEE  C P+  T++ +I    K   +  A Q+   M +   SP+  A T M  +LC
Sbjct: 1422 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD-EAVTSM--LLC 1478

Query: 352  QNNMFHQAHSLI 363
              +   Q H+ +
Sbjct: 1479 LASFDPQWHAAL 1490



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 198/404 (49%), Gaps = 3/404 (0%)

Query: 165  VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
               +N L+  + K       F +  ++ D GI P++ T + +I   C +  V    G+ G
Sbjct: 946  TDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFG 1005

Query: 225  QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
                RG  P+  + T+L+KG  +     +A  L++ M ++G L +   Y  LI+GLC   
Sbjct: 1006 GFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKAR 1065

Query: 285  SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
                A+ +  +M+ N C  +V TY  +ID   K G    A  +++ MI  G  P+VV Y+
Sbjct: 1066 KTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYS 1124

Query: 345  CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
             ++  LC+     +A    ++M       +  T+N+ I GL   G        L+ M   
Sbjct: 1125 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184

Query: 405  ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               P+  T+  L+DGL +  +V EA +++  +   G + +I+TYNT+++G+C  G + +A
Sbjct: 1185 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244

Query: 465  FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +L   +   G KL+  ++NI+I  YCK  K++ A +  + +R  G   P  ++Y +L+ 
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKG-LKPSTVTYNTLIG 1303

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
             +C SG ++ A     +M   G     +T+ VL+  L  N GHL
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN-GHL 1346



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 5/282 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ L ++ ++   Q +L+ M+ +G       + +++N    VG  E A K+F  + + G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +K  V  YN +++    + +       +  M+  G++P+  TYN L+ ALC++ RV  A 
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            KL VEM   G      +Y  ++  +CK G +EEA +L            + V++ L++G+
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            C+  K+EEA+    E+   G++P+ I Y+ +I+ LC+ G +  ++ +L QM  +GC P+ 
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 1435

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
             +F  +++  L     HEA  L   M    F P+    S L+
Sbjct: 1436 ITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 242/444 (54%), Gaps = 7/444 (1%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A++A K FY ++E G+ P ++  N +L   L  NR  M   +Y+ M R  +   V+T+NI
Sbjct: 173 ADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNI 232

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS 163
           ++  LCK  ++  A + +  M   G  P+ VSY TI+      G +E AR +  AMR   
Sbjct: 233 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV-K 291

Query: 164 GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G+      Y +LI+G+CKE ++EEA  L  +MV+ G+ PN +TY+T+I   C+ G++E +
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
                +M  +G  P++ ++  L+    + GR  EA D+   M ++G +P+ + Y+ LI+G
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G+  +A  +  +M      P   TY++LI   ++   +  A  ++ +++  G SP+
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V+ +  MV   C N    +A  L+++M  ++ PP+ VTFNT ++G C  G+V+ A  LLD
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 531

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +MK+    P+  +YN L+ G  R   +K+AF +  E+   G    ++TYN ++  +C+  
Sbjct: 532 EMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 591

Query: 460 MVVEAFQLLGKMLIEGTKLDAITF 483
               A +LL +M+ +G   D  T+
Sbjct: 592 EGDLAEELLKEMVNKGISPDDSTY 615



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 238/449 (53%), Gaps = 6/449 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           MK  G+ P + T N +L    K NR++ A+ L  EM     +    ++  +V+ +CK G+
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++ARE       + F   V  YN +I+G      IE A  +L  M  +GI+P+  TY +
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS +C  G +E + G+  +M   G  PN  ++ +L+ GY   G    A    + M+++G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            +P+V  Y+ L+H L   G M EA  +  +M +    P+  TY+ LI+G+++ GN   A 
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            + N M+S G  P  V YT ++ VL + N   +A  L EK+  +   P+ + FN  + G 
Sbjct: 423 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 482

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G V+ A  LL +M +    P+  T+N L+ G  R  +V+EA  L+ E+++ GI+ + 
Sbjct: 483 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 542

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           ++YNT++ G  R G + +AF++  +ML  G     +T+N +I   CK  + + A +LL  
Sbjct: 543 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 602

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           +   G  +PD  +Y SL+ G+ N   + E
Sbjct: 603 MVNKG-ISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 238/503 (47%), Gaps = 33/503 (6%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           K  +++   ++   +A NR  + + +  +  R  ++ ++  +++L++  C+  R D A+K
Sbjct: 121 KLALQLLKQVMGTRIATNR-ELFDELTLSRDRLSVKSSI-VFDLLVRVCCELRRADEAFK 178

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKI 181
               M  KG  P                               +   N +++   K +++
Sbjct: 179 CFYMMKEKGIVPK------------------------------IETCNDMLSLFLKLNRM 208

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E A+ L  EM    I   V T++ +++ LC  G ++ +   +G M   G  PN+ S+ ++
Sbjct: 209 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI 268

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + GY   G    A  + + M  +G  P+   Y +LI G+C  G ++EA  +  +M E   
Sbjct: 269 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 328

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  TY+ LIDG+   G+L  A    + M+  G  P+V  Y  +V  L       +A  
Sbjct: 329 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADD 388

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +I++M  +   P+ +T+N  I G   CG    A  L ++M      P   TY  L+  L 
Sbjct: 389 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 448

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R NR+KEA +L  +I   G+  +++ +N ++ G C  G V  AF LL +M  +    D +
Sbjct: 449 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 508

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           TFN ++   C++GKV  A  LLD ++  G   PD ISY +L+ G    G +++AF    +
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRG-IKPDHISYNTLISGYGRRGDIKDAFRVRDE 567

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           ML+ G  P   T+N L++ L  N
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKN 590



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 178/353 (50%), Gaps = 5/353 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     +  I+G + +L  M+V+G+      + S+I+   + G  E+A  +F ++ E G
Sbjct: 268 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 327

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++D    +            M + G+ P+V TYN+L+ AL    R+  A 
Sbjct: 328 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 387

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
            ++ EM  KG  PDA++Y  +++   + G  ++A +L       G+      Y +LI  L
Sbjct: 388 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 447

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            + ++++EA  L  +++D+G+ P+VI ++ ++   C  GNVE +  +L +M  +   P+ 
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 507

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L++G    G+  EA  L + M R G  P+ ++Y+TLI G    G + +A  V  +
Sbjct: 508 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 567

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           M      P + TY+ALI    K      A ++   M++ G SP+   Y  +++
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 620



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 123/233 (52%), Gaps = 5/233 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M+ +G+      +  +IN Y R G A++A  +   +   G++PT   Y  ++  L 
Sbjct: 389 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 448

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             NR    + ++  +   G+ P+V  +N ++   C N  V+ A+ LL EM  K   PD V
Sbjct: 449 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 508

Query: 137 SYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ T++   C+ G+VEEAR    E+  R        YN LI+G  +   I++AF +  EM
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           +  G +P ++TY+ +I  LC     + +  +L +M  +G +P+  ++ SL++G
Sbjct: 569 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 2/208 (0%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +++ F+  ++  C   R D A K    MK+   +P I T N++L   L++NR++ A+ L 
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E+ +  I   + T+N +++ +C+ G + +A + +G M   G K + +++N II+ Y  +
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G +  A ++LD +R  G   PD  +Y SL+ G+C  G ++EA     KM+  G+ PN  T
Sbjct: 276 GNIEGARRILDAMRVKG-IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 334

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +N L+   + N G L   +   D M  K
Sbjct: 335 YNTLIDG-YCNKGDLERAFSYRDEMVKK 361



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 35/136 (25%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + LL +MK  G+      + ++I+ Y R G  + A ++   +   G  PT+  YN
Sbjct: 522 KVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYN 581

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +                                   +K LCKN   D A +LL EM NK
Sbjct: 582 AL-----------------------------------IKCLCKNQEGDLAEELLKEMVNK 606

Query: 130 GCAPDAVSYTTIVSSI 145
           G +PD  +Y +++  +
Sbjct: 607 GISPDDSTYLSLIEGM 622


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 257/506 (50%), Gaps = 20/506 (3%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N ++   +  NR  +   +Y  M+   +  N++++NIL+K  C  +++  +     ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAR-------ELAMRFGSGVSV--------YNALIN 173
            G  PD V++ T++  +C   ++ EA        E    F   V +        +N LIN
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLC E ++ EA  L+ +MV +G+  +V+TY TI++ +C +G+ +++L +L +M      P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++  +++++      G   +A  L++ M+ +G  PNV  Y+ +I G CS G   +A  + 
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M E    P+V T++ALI    K G L  A ++ + M+     P+ V Y  M+   C++
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           N F  A  + + MA     P+ VTFNT I   C   RVD  M+LL ++ +   + N TTY
Sbjct: 410 NRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 465

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+ G   V+ +  A +L  E+   G+  + +T N +L+G C    + EA +L   + +
Sbjct: 466 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 525

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
               LD + +NIII+  CK  KV+ A  L   +   G   PD+ +Y  ++ G C    + 
Sbjct: 526 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCGKSAIS 584

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVR 559
           +A +   KM + G  P+ +T+N L+R
Sbjct: 585 DANVLFHKMKDNGHEPDNSTYNTLIR 610



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 240/477 (50%), Gaps = 19/477 (3%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFS--------MIN--PIYSNMKRDGMEP 98
           +L  F ++ + G +P V  +N +L  L  E+R S        M+    ++  M   G+ P
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTP 219

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
            V T+N L+  LC   RV  A  L+ +M  KG   D V+Y TIV+ +CK+G  + A  L 
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279

Query: 159 MRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            +         V +Y+A+I+ LCK+    +A +L  EM+++GI PNV TY+ +I   C  
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G    +  +L  M  R  NP++ +F +L+   +  G+  EA  L + M+     P+ V Y
Sbjct: 340 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 399

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +++I+G C +   D+A      M +    P+V T++ +ID + +A  +    Q+   +  
Sbjct: 400 NSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 455

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G   N   Y  ++   C+ +  + A  L ++M      P+T+T N  + G C   +++ 
Sbjct: 456 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 515

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++L + ++  +   +   YN ++ G+ + ++V EA++L   +   G++ ++ TYN ++ 
Sbjct: 516 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 575

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           G C    + +A  L  KM   G + D  T+N +I    K G+++ +I+L+  +R  G
Sbjct: 576 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 632



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 199/406 (49%), Gaps = 15/406 (3%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N +I    + ++ + A  L  +M  R I  N+ +++ +I   CD   +  SL   G++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEA----------SDLWNRMIREGFLPNVVAYSTLIH 278
            G  P++ +F +LL G  L  R  EA            L+++M+  G  P V+ ++TLI+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLIN 229

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G + EA ++  +M       +V TY  +++G  K G+   A  + ++M      P
Sbjct: 230 GLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 289

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +VV Y+ ++  LC++     A  L  +M  +   PN  T+N  I G C  GR   A +LL
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M + E  P++ T+N L+   ++  ++ EA +L  E+    I  + VTYN++++G C+ 
Sbjct: 350 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 409

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
               +A  +   M       D +TFN II  YC+  +V+  +QLL  I   G    +  +
Sbjct: 410 NRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG-LVANTTT 464

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           Y +L+ G C    +  A    Q+M++ G+CP+  T N+L+     N
Sbjct: 465 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 510



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G+      + +++N   ++G  + AL +  ++ E  +KP V IY+ I+D L 
Sbjct: 243 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 302

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   S    ++S M   G+ PNVFTYN ++   C   R   A +LL +M  +   PD +
Sbjct: 303 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 362

Query: 137 SYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++  ++S+  K G++ EA +L         F   V+ YN++I G CK ++ ++A      
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDAK----H 417

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M D    P+V+T++TII   C    V+  + +L ++  RG   N  ++ +L+ G+     
Sbjct: 418 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 477

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            + A DL+  MI  G  P+ +  + L++G C N  ++EA+ +   ++ +    +   Y+ 
Sbjct: 478 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 537

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I G  K   +  A  ++  +  +G  P+V  Y  M+   C  +    A+ L  KM    
Sbjct: 538 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 597

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             P+  T+NT I+G    G +D +++L+ +M+ 
Sbjct: 598 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 630



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 198/440 (45%), Gaps = 9/440 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM   G++     F ++IN     G   +A  +  ++   GL   V  Y  I++ + 
Sbjct: 208 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 267

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     + S M+   ++P+V  Y+ ++  LCK+     A  L  EM  KG AP+  
Sbjct: 268 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 327

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++   C  G+  +A+ L            V  +NALI+   KE K+ EA  L  EM
Sbjct: 328 TYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 387

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R I P+ +TY+++I   C     + +      MF    +P++ +F +++  Y    R 
Sbjct: 388 LHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRV 443

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E   L   + R G + N   Y+TLIHG C   +++ A  +  +M  +   P+  T + L
Sbjct: 444 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 503

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + GF +   L  A +++  +  +    + VAY  ++  +C+ +   +A  L   +     
Sbjct: 504 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 563

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+N  I G CG   +  A  L  +MK     P+ +TYN L+ G L+   + ++ E
Sbjct: 564 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 623

Query: 432 LVTEIEKCGIQLNIVTYNTI 451
           L++E+   G   +  T   +
Sbjct: 624 LISEMRSNGFSGDAFTIKMV 643



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 169/342 (49%), Gaps = 9/342 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +       QYL  +M  +G++ +   +  +I+ +   G    A ++   + E  
Sbjct: 297 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 356

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++ A + E +      +   M    + P+  TYN ++   CK+NR D A 
Sbjct: 357 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 416

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +   M     +PD V++ TI+   C+  +V+E     RE++ R   +  + YN LI+G 
Sbjct: 417 HMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 472

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +  A  L  EM+  G+ P+ IT + ++   C+   +E +L +   + +   + + 
Sbjct: 473 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 532

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G   G +  EA DL+  +   G  P+V  Y+ +I G C   ++ +A  + ++
Sbjct: 533 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 592

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           M++N   P+ +TY+ LI G  KAG +  + ++ + M SNG S
Sbjct: 593 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 634



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 18/319 (5%)

Query: 9   CEIDG---------VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           C IDG          Q LL+ M    ++     F ++I++  + G   +A K+   +   
Sbjct: 331 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 390

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            + P    YN ++      NRF     ++  M      P+V T+N ++   C+  RVD  
Sbjct: 391 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 446

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALING 174
            +LL E+  +G   +  +Y T++   C++  +  A++L     S GV       N L+ G
Sbjct: 447 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 506

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+  K+EEA  L   +    ID + + Y+ II  +C    V+ +  +   + + G  P+
Sbjct: 507 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 566

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++  ++ G+       +A+ L+++M   G  P+   Y+TLI G    G +D+++ +  
Sbjct: 567 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 626

Query: 295 QMEENSCPPNVTTYSALID 313
           +M  N    +  T   + D
Sbjct: 627 EMRSNGFSGDAFTIKMVAD 645



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 133/318 (41%), Gaps = 63/318 (19%)

Query: 276 LIHGLCS---NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           LIHG  +     S+     V+++ EE         + +L D          A   ++ M+
Sbjct: 49  LIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDD----------AIDFFDYMV 98

Query: 333 SNGCSPNVVAYTC--MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
            +   P   A  C  ++ V  + N    A SL  KM     P N  +FN  IK  C C +
Sbjct: 99  RS--RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           + +++               +T+ +L                     K G Q ++VT+NT
Sbjct: 157 LSFSL---------------STFGKL--------------------TKLGFQPDVVTFNT 181

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLD----------AITFNIIIYAYCKQGKVNNAI 500
           +LHG+C    + EA  L G M+  G+  D           ITFN +I   C +G+V  A 
Sbjct: 182 LLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 241

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            L++++ G G  + D+++Y +++ G+C  G  + A   L KM    I P+   ++ ++  
Sbjct: 242 ALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 300

Query: 561 LFSNLGHLGPVYILDDIM 578
           L  +  H    Y+  +++
Sbjct: 301 LCKDGHHSDAQYLFSEML 318



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 7/152 (4%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           EKL E  E      L + +++  +      +  +I+   +    ++A  +F  +   G++
Sbjct: 511 EKLEEALE------LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 564

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V+ YN ++     ++  S  N ++  MK +G EP+  TYN L++   K   +D + +L
Sbjct: 565 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 624

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           + EM + G + DA +   +V+ +   G+++++
Sbjct: 625 ISEMRSNGFSGDAFT-IKMVADLITDGRLDKS 655


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 279/562 (49%), Gaps = 15/562 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL +MK  GV     +  ++I    R G  ++AL+ F  + E    P V  YN
Sbjct: 126 QVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYN 184

Query: 70  HILDALLAENRFSMINPIYSNMKR-----DGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
            +++ L   NR      ++ +M++      G EP+V +Y+ ++ ALCK  RVD AY+   
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEH 179
            M   GCAP+ V+Y++++  +CK+ +  E  EL +      FG  +  +NA+++ L K  
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           + E+A      ++  G  PNV+TY+  +  LC  G V+ +  IL +M      P++ +++
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYS 364

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           S++ G+   GR  +A D++ RM+    +P+ V + TL+HG   +    EA  V   M   
Sbjct: 365 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 424

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P + TY+ L+D    A ++  A +I+++M      P+   Y  +++ LC+     +A
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
              ++ M  +N  PN    +  ++ LC  G VD A  +LD + +  C P   T+  L++ 
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEE 544

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L    + + A +L   +   G   +  TY+  +  +C+AG   EA +++ +M+++G + D
Sbjct: 545 LYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPD 601

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T+  ++ + C   +V +AI   +++   G   P +++YT L+   C++    EAF   
Sbjct: 602 EGTYVAVLRSLCGLDRVESAIAEFEKMASRG-CAPGLVTYTLLIGEACSADMADEAFRIF 660

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
           + M+  G  P   T   L   L
Sbjct: 661 EAMVAAGFTPQAQTMRTLSSCL 682



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 276/565 (48%), Gaps = 44/565 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++N++ +    E+A ++     E    P   +Y  +++      +      +   MK  G
Sbjct: 82  LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++ +V  ++ L++ LC+  R+D A +    MG + C+P+ ++Y T+V+ +CK  +++EA 
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEAL 200

Query: 156 EL----AMRFGSG------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           EL      R+ +       V  Y+ +I+ LCK  ++++A+     M   G  PNV+TYS+
Sbjct: 201 ELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSS 260

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC V      L +L  M  +G   NI  F ++L          +A   + R+++ G
Sbjct: 261 LIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 320

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNVV Y+  +HGLC  G +DEA  +  +M E+   P+V TYS++IDGF KAG +  A 
Sbjct: 321 KKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 380

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            ++ RM+ + C P+ V +  ++    ++    +A  + E M      P   T+N  +  +
Sbjct: 381 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 440

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           CG   V+ A+++  +MK+ +  P+  TY  L+  L R  RV EA E +  +E   +  N 
Sbjct: 441 CGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 500

Query: 446 VTYNTILHGVCRAGMVVEAFQLLG--------------KMLIE----------GTKL--- 478
              + ++  +C+ G V EA  +L               K+L+E           +KL   
Sbjct: 501 AICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS 560

Query: 479 -----DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
                DA T+++ +   CK GK + A+++++++   G   PD  +Y ++L  +C    ++
Sbjct: 561 PGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKG-VRPDEGTYVAVLRSLCGLDRVE 619

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
            A    +KM + G  P   T+ +L+
Sbjct: 620 SAIAEFEKMASRGCAPGLVTYTLLI 644



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 239/480 (49%), Gaps = 12/480 (2%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G + N +T  +LL A  K  R + A++LL E     C P+ + YTT+++  CK GQV+
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 153 EARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A EL            V +++ LI GLC++ +I+EA      M +    PNVITY+T++
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVV 187

Query: 208 SSLCDVGNVETSLGILGQMFVR-----GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           + LC    ++ +L +   M  R     GC P++ S+++++       R  +A + + RM 
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 247

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             G  PNVV YS+LI GLC      E + +   M+E     N+  ++A++    K     
Sbjct: 248 AVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQE 307

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A Q + R++ +G  PNVV Y   V  LC+     +A+ ++ +M      P+ +T+++ I
Sbjct: 308 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSII 367

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            G C  GR+D A  +  +M  +EC+P+  T+  LL G     + +EAF +  ++   G  
Sbjct: 368 DGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFI 427

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
             + TYN ++  VC A  V  A ++  KM  +  + D  T+  +I   C+  +V+ A + 
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEF 487

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           LD +          I + +L+  +C  G + EA   L  ++  G  P   T+ +LV  L+
Sbjct: 488 LDVMEADNVVPNGAICH-ALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELY 546



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 213/456 (46%), Gaps = 8/456 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D      ++M+  G + +   + S+I+   +V    + L++   ++E G
Sbjct: 226 VIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKG 285

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +  +N +L AL   +        +  + + G +PNV TYN+ +  LCK  RVD AY
Sbjct: 286 FGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAY 345

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
           ++L+EM      PD ++Y++I+   CK G++++A ++  R      +     +  L++G 
Sbjct: 346 RILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGF 405

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  K  EAF +  +MV+ G  P + TY+ ++  +C   +VE++L I  +M  +   P+ 
Sbjct: 406 SEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC 465

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  L++      R  EA +  + M  +  +PN      L+  LC  G +DEA SV   
Sbjct: 466 NTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDN 525

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E  C P   T+  L++          AS++     S G   +   Y+  V  +C+   
Sbjct: 526 VVEVGCQPLGETFKILVEELYLRKKWEAASKLLR---SPGFVADAATYSLCVAEICKAGK 582

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  +IE+M  +   P+  T+   ++ LCG  RV+ A+   ++M    C P + TY  
Sbjct: 583 PDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTL 642

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           L+      +   EAF +   +   G      T  T+
Sbjct: 643 LIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 150/360 (41%), Gaps = 8/360 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G  ++A ++   + E  + P V  Y+ I+D      R    + +++ M      P+  
Sbjct: 337 KAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPV 396

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           T+  LL    ++ +   A+++  +M N G  P   +Y  ++  +C    VE A E+  + 
Sbjct: 397 TFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM 456

Query: 162 G-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                    + Y  LI  LC+  +++EA   L  M    + PN      ++  LC  G V
Sbjct: 457 KRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEV 516

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +L  +   GC P   +F  L++   L  +   AS L       GF+ +   YS  
Sbjct: 517 DEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLC 573

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  +C  G  DEAV V  QM      P+  TY A++        +  A   + +M S GC
Sbjct: 574 VAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGC 633

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P +V YT ++   C  +M  +A  + E M      P   T  T    L   G  D  ++
Sbjct: 634 APGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLVR 693



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 11/231 (4%)

Query: 342 AYTCMV--KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           AYTC V      +     +AH L+++     C PN + + T I G C  G+VD A +LLD
Sbjct: 76  AYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLD 135

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRA 458
           +MK+     ++  ++ L+ GL R  R+ EA E    + E+C    N++TYNT+++G+C+A
Sbjct: 136 EMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSP--NVITYNTVVNGLCKA 193

Query: 459 GMVVEAFQLLGKM-----LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             + EA +L   M        G + D I+++ +I A CK  +V+ A +   R+R  G   
Sbjct: 194 NRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG-CA 252

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           P++++Y+SL+ G+C      E    L  M  +G   N   +N ++ +L+ N
Sbjct: 253 PNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 303


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 265/524 (50%), Gaps = 37/524 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REF 59
           +IE      E   +  +L +MK EG   +E +FI +  +  +  L  +A+  F+R+  + 
Sbjct: 95  LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDL 154

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNM---KRDGMEPNVFTYNILLKALCKNNRV 116
             K TVK +N +L+ ++ E  FS     Y ++      G +PN+ TYN+++KALCK  ++
Sbjct: 155 HCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQI 214

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLC 176
           D A     EM  K C PD  +Y+T+++ +C                              
Sbjct: 215 DRAVDTFREMPLKNCNPDVFTYSTLMNGLC------------------------------ 244

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE +++EA +LL EM   G  PN +T++ +I +L   G++  +  ++  MF++GC PN  
Sbjct: 245 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 304

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ +L+ G  L G+  +A  L  +M+    +PN V Y T+I+GL      ++ V +   M
Sbjct: 305 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 364

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           EE     N   YS+LI G  K G    A ++W  M   GC PNVV Y   +  LC++   
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 424

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  ++++M  +   PN  T+++ +KG    G    A+ +  +M   +   N+   + L
Sbjct: 425 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 484

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE-- 474
           L+GL    R++EA  + T +   G++ ++V Y++++ G+C  G V +  +L  +M  +  
Sbjct: 485 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 544

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            ++ D +T+NI+  A C+Q  +  AI LL+ +   G  +PD ++
Sbjct: 545 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG-CDPDSLT 587



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 237/504 (47%), Gaps = 10/504 (1%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +  +++       F  I+ +   MKR+G       + ++ KA  K +    A      M 
Sbjct: 92  FYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMA 151

Query: 128 NK-GCAPDAVSYTTIVSSICKLGQVEEARELAMR--------FGSGVSVYNALINGLCKE 178
           N   C     S+ ++++ I + G    A +  +         F   +  YN +I  LCK 
Sbjct: 152 NDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKL 211

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +I+ A     EM  +  +P+V TYST+++ LC    V+ ++ +L +M   GC PN  +F
Sbjct: 212 GQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTF 271

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             L+      G    A+ L + M  +G +PN V Y+TLIHGLC  G +D+A+S+  +M  
Sbjct: 272 NVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVS 331

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           + C PN  TY  +I+G  K         I   M   G   N   Y+ ++  L +      
Sbjct: 332 SKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSEN 391

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  L ++MA + C PN V +  FI GLC   + D A  +L +M     LPN  TY+ L+ 
Sbjct: 392 AVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMK 451

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G  +    ++A  +  E+    ++ N+V  + +L+G+C +G + EA  +   ML EG K 
Sbjct: 452 GFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 511

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           D + ++ +I   C  G V+  ++L   ++    +  PD+++Y  L   +C    +  A  
Sbjct: 512 DVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAID 571

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
            L  ML+EG  P+  T N+ + +L
Sbjct: 572 LLNSMLDEGCDPDSLTCNIFLETL 595



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 227/476 (47%), Gaps = 29/476 (6%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLK---PTVKIYNHILDALLAENRFSMINPIYSNMK 92
           +I +  ++G  ++A+  F   RE  LK   P V  Y+ +++ L  E R      +   M+
Sbjct: 204 IIKALCKLGQIDRAVDTF---REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 260

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
            +G  PN  T+N+L+ AL KN  +  A KL+  M  KGC P+ V+Y T++  +C  G+++
Sbjct: 261 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 320

Query: 153 EARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A  L  +  S   V     Y  +INGL K+ + E+   +L  M +RG   N   YS++I
Sbjct: 321 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 380

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           S L   G  E ++ +  +M  +GC PN+  + + + G     +  EA D+   M+ +GFL
Sbjct: 381 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 440

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN   YS+L+ G    G   +A+ V  +M       NV   S L++G  ++G L  A  +
Sbjct: 441 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 500

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE--NCPPNTVTFNTFIKGL 385
           W  M+  G  P+VVAY+ M+K LC      +   L  +M  +     P+ VT+N     L
Sbjct: 501 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 560

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL-RVNRVKEAFELVTEIEKCGIQLN 444
           C    +  A+ LL+ M    C P+  T N  L+ L  R+N  ++    + E         
Sbjct: 561 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE--------- 611

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
                 ++  + +    + A +++ +ML+     +  T++ +I   CK  ++   I
Sbjct: 612 ------LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 179/384 (46%), Gaps = 42/384 (10%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD-EAVSVSYQ 295
           +F  L++ Y      H    + +RM REG +     +  LI   C    +  EAV+  ++
Sbjct: 91  TFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIF-ILIFKACGKAHLPGEAVNFFHR 149

Query: 296 MEEN-SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI---SNGCSPNVVAYTCMVKVLC 351
           M  +  C   V +++++++   + G+   A + +  +    S G  PN++ Y  ++K LC
Sbjct: 150 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 209

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A     +M  +NC P+  T++T + GLC   RVD A+ LLD+M+   CLPN  
Sbjct: 210 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 269

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+N L+D L +   +  A +LV  +   G   N VTYNT++HG+C  G + +A  LL KM
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329

Query: 472 LIEGTKLDAITFNIII----------------------------YAYC-------KQGKV 496
           +      + +T+  II                            Y Y        K+GK 
Sbjct: 330 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 389

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
            NA++L   +   G   P+++ Y + + G+C      EA   LQ+ML++G  PN  T++ 
Sbjct: 390 ENAVRLWKEMAEKG-CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448

Query: 557 LVRSLFSNLGHLGPVYILDDIMAN 580
           L++  F        + +  ++M+ 
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQ 472


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 265/524 (50%), Gaps = 37/524 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REF 59
           +IE      E   +  +L +MK EG   +E +FI +  +  +  L  +A+  F+R+  + 
Sbjct: 71  LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDL 130

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNM---KRDGMEPNVFTYNILLKALCKNNRV 116
             K TVK +N +L+ ++ E  FS     Y ++      G +PN+ TYN+++KALCK  ++
Sbjct: 131 HCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQI 190

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLC 176
           D A     EM  K C PD  +Y+T+++ +C                              
Sbjct: 191 DRAVDTFREMPLKNCNPDVFTYSTLMNGLC------------------------------ 220

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE +++EA +LL EM   G  PN +T++ +I +L   G++  +  ++  MF++GC PN  
Sbjct: 221 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEV 280

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ +L+ G  L G+  +A  L  +M+    +PN V Y T+I+GL      ++ V +   M
Sbjct: 281 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 340

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           EE     N   YS+LI G  K G    A ++W  M   GC PNVV Y   +  LC++   
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 400

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  ++++M  +   PN  T+++ +KG    G    A+ +  +M   +   N+   + L
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 460

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE-- 474
           L+GL    R++EA  + T +   G++ ++V Y++++ G+C  G V +  +L  +M  +  
Sbjct: 461 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 520

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            ++ D +T+NI+  A C+Q  +  AI LL+ +   G  +PD ++
Sbjct: 521 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG-CDPDSLT 563



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 237/504 (47%), Gaps = 10/504 (1%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +  +++       F  I+ +   MKR+G       + ++ KA  K +    A      M 
Sbjct: 68  FYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMA 127

Query: 128 NK-GCAPDAVSYTTIVSSICKLGQVEEARELAMR--------FGSGVSVYNALINGLCKE 178
           N   C     S+ ++++ I + G    A +  +         F   +  YN +I  LCK 
Sbjct: 128 NDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKL 187

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +I+ A     EM  +  +P+V TYST+++ LC    V+ ++ +L +M   GC PN  +F
Sbjct: 188 GQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTF 247

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             L+      G    A+ L + M  +G +PN V Y+TLIHGLC  G +D+A+S+  +M  
Sbjct: 248 NVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVS 307

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           + C PN  TY  +I+G  K         I   M   G   N   Y+ ++  L +      
Sbjct: 308 SKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSEN 367

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  L ++MA + C PN V +  FI GLC   + D A  +L +M     LPN  TY+ L+ 
Sbjct: 368 AVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMK 427

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G  +    ++A  +  E+    ++ N+V  + +L+G+C +G + EA  +   ML EG K 
Sbjct: 428 GFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKP 487

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           D + ++ +I   C  G V+  ++L   ++    +  PD+++Y  L   +C    +  A  
Sbjct: 488 DVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAID 547

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
            L  ML+EG  P+  T N+ + +L
Sbjct: 548 LLNSMLDEGCDPDSLTCNIFLETL 571



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 227/476 (47%), Gaps = 29/476 (6%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLK---PTVKIYNHILDALLAENRFSMINPIYSNMK 92
           +I +  ++G  ++A+  F   RE  LK   P V  Y+ +++ L  E R      +   M+
Sbjct: 180 IIKALCKLGQIDRAVDTF---REMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ 236

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
            +G  PN  T+N+L+ AL KN  +  A KL+  M  KGC P+ V+Y T++  +C  G+++
Sbjct: 237 AEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 296

Query: 153 EARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A  L  +  S   V     Y  +INGL K+ + E+   +L  M +RG   N   YS++I
Sbjct: 297 KALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLI 356

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           S L   G  E ++ +  +M  +GC PN+  + + + G     +  EA D+   M+ +GFL
Sbjct: 357 SGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFL 416

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN   YS+L+ G    G   +A+ V  +M       NV   S L++G  ++G L  A  +
Sbjct: 417 PNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTV 476

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE--NCPPNTVTFNTFIKGL 385
           W  M+  G  P+VVAY+ M+K LC      +   L  +M  +     P+ VT+N     L
Sbjct: 477 WTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNAL 536

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL-RVNRVKEAFELVTEIEKCGIQLN 444
           C    +  A+ LL+ M    C P+  T N  L+ L  R+N  ++    + E         
Sbjct: 537 CRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDE--------- 587

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
                 ++  + +    + A +++ +ML+     +  T++ +I   CK  ++   I
Sbjct: 588 ------LVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 51/425 (12%)

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS-------FTSLLKGYLLGGRTHEAS 255
           +S++  S     + +  L I  Q+F     P   S       F  L++ Y      H   
Sbjct: 28  FSSLPLSSNSTPDAQNELSISPQIF--KSRPQFGSYKLGDATFYRLIENYATSREFHFIH 85

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD-EAVSVSYQMEEN-SCPPNVTTYSALID 313
            + +RM REG +     +  LI   C    +  EAV+  ++M  +  C   V +++++++
Sbjct: 86  QVLDRMKREGRVLTETIF-ILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLN 144

Query: 314 GFAKAGNLLGASQIWNRMI---SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
              + G+   A + +  +    S G  PN++ Y  ++K LC+     +A     +M  +N
Sbjct: 145 VIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN 204

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C P+  T++T + GLC   RVD A+ LLD+M+   CLPN  T+N L+D L +   +  A 
Sbjct: 205 CNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAA 264

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII--- 487
           +LV  +   G   N VTYNT++HG+C  G + +A  LL KM+      + +T+  II   
Sbjct: 265 KLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGL 324

Query: 488 -------------------------YAYC-------KQGKVNNAIQLLDRIRGGGEWNPD 515
                                    Y Y        K+GK  NA++L   +   G   P+
Sbjct: 325 VKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG-CKPN 383

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
           ++ Y + + G+C      EA   LQ+ML++G  PN  T++ L++  F        + +  
Sbjct: 384 VVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWK 443

Query: 576 DIMAN 580
           ++M+ 
Sbjct: 444 EMMSQ 448


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/444 (31%), Positives = 242/444 (54%), Gaps = 7/444 (1%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A++A K FY ++E G+ P ++  N +L   L  NR  M   +Y+ M R  +   V+T+NI
Sbjct: 195 ADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNI 254

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS 163
           ++  LCK  ++  A + +  M   G  P+ VSY TI+      G +E AR +  AMR   
Sbjct: 255 MVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV-K 313

Query: 164 GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G+      Y +LI+G+CKE ++EEA  L  +MV+ G+ PN +TY+T+I   C+ G++E +
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
                +M  +G  P++ ++  L+    + GR  EA D+   M ++G +P+ + Y+ LI+G
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G+  +A  +  +M      P   TY++LI   ++   +  A  ++ +++  G SP+
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V+ +  MV   C N    +A  L+++M  ++ PP+ VTFNT ++G C  G+V+ A  LLD
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLD 553

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +MK+    P+  +YN L+ G  R   +K+AF +  E+   G    ++TYN ++  +C+  
Sbjct: 554 EMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQ 613

Query: 460 MVVEAFQLLGKMLIEGTKLDAITF 483
               A +LL +M+ +G   D  T+
Sbjct: 614 EGDLAEELLKEMVNKGISPDDSTY 637



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 238/449 (53%), Gaps = 6/449 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           MK  G+ P + T N +L    K NR++ A+ L  EM     +    ++  +V+ +CK G+
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++ARE       + F   V  YN +I+G      IE A  +L  M  +GI+P+  TY +
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS +C  G +E + G+  +M   G  PN  ++ +L+ GY   G    A    + M+++G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            +P+V  Y+ L+H L   G M EA  +  +M +    P+  TY+ LI+G+++ GN   A 
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            + N M+S G  P  V YT ++ VL + N   +A  L EK+  +   P+ + FN  + G 
Sbjct: 445 DLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGH 504

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G V+ A  LL +M +    P+  T+N L+ G  R  +V+EA  L+ E+++ GI+ + 
Sbjct: 505 CANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 564

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           ++YNT++ G  R G + +AF++  +ML  G     +T+N +I   CK  + + A +LL  
Sbjct: 565 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKE 624

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           +   G  +PD  +Y SL+ G+ N   + E
Sbjct: 625 MVNKG-ISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 238/503 (47%), Gaps = 33/503 (6%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           K  +++   ++   +A NR  + + +  +  R  ++ ++  +++L++  C+  R D A+K
Sbjct: 143 KLALQLLKQVMGTRIATNR-ELFDELTLSRDRLSVKSSI-VFDLLVRVCCELRRADEAFK 200

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKI 181
               M  KG  P                               +   N +++   K +++
Sbjct: 201 CFYMMKEKGIVPK------------------------------IETCNDMLSLFLKLNRM 230

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E A+ L  EM    I   V T++ +++ LC  G ++ +   +G M   G  PN+ S+ ++
Sbjct: 231 EMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTI 290

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + GY   G    A  + + M  +G  P+   Y +LI G+C  G ++EA  +  +M E   
Sbjct: 291 IHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGL 350

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  TY+ LIDG+   G+L  A    + M+  G  P+V  Y  +V  L       +A  
Sbjct: 351 VPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADD 410

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +I++M  +   P+ +T+N  I G   CG    A  L ++M      P   TY  L+  L 
Sbjct: 411 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 470

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R NR+KEA +L  +I   G+  +++ +N ++ G C  G V  AF LL +M  +    D +
Sbjct: 471 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 530

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           TFN ++   C++GKV  A  LLD ++  G   PD ISY +L+ G    G +++AF    +
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRG-IKPDHISYNTLISGYGRRGDIKDAFRVRDE 589

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           ML+ G  P   T+N L++ L  N
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKN 612



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 178/353 (50%), Gaps = 5/353 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     +  I+G + +L  M+V+G+      + S+I+   + G  E+A  +F ++ E G
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++D    +            M + G+ P+V TYN+L+ AL    R+  A 
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 409

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
            ++ EM  KG  PDA++Y  +++   + G  ++A +L       G+      Y +LI  L
Sbjct: 410 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            + ++++EA  L  +++D+G+ P+VI ++ ++   C  GNVE +  +L +M  +   P+ 
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 529

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L++G    G+  EA  L + M R G  P+ ++Y+TLI G    G + +A  V  +
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDE 589

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           M      P + TY+ALI    K      A ++   M++ G SP+   Y  +++
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 642



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 124/233 (53%), Gaps = 5/233 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M+ +G+      +  +IN Y R G A++A  +   +   G++PT   Y  ++  L 
Sbjct: 411 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLS 470

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             NR    + ++  +   G+ P+V  +N ++   C N  V+ A+ LL EM  K   PD V
Sbjct: 471 RRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEV 530

Query: 137 SYTTIVSSICKLGQVEEAR----ELAMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEM 191
           ++ T++   C+ G+VEEAR    E+  R      + YN LI+G  +   I++AF +  EM
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           +  G +P ++TY+ +I  LC     + +  +L +M  +G +P+  ++ SL++G
Sbjct: 591 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 2/208 (0%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +++ F+  ++  C   R D A K    MK+   +P I T N++L   L++NR++ A+ L 
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E+ +  I   + T+N +++ +C+ G + +A + +G M   G K + +++N II+ Y  +
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G +  A ++LD +R  G   PD  +Y SL+ G+C  G ++EA     KM+  G+ PN  T
Sbjct: 298 GNIEGARRILDAMRVKG-IEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 356

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +N L+   + N G L   +   D M  K
Sbjct: 357 YNTLIDG-YCNKGDLERAFSYRDEMVKK 383



 Score = 46.2 bits (108), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 35/136 (25%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + LL +MK  G+      + ++I+ Y R G  + A ++   +   G  PT+  YN
Sbjct: 544 KVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYN 603

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++                                   K LCKN   D A +LL EM NK
Sbjct: 604 ALI-----------------------------------KCLCKNQEGDLAEELLKEMVNK 628

Query: 130 GCAPDAVSYTTIVSSI 145
           G +PD  +Y +++  +
Sbjct: 629 GISPDDSTYLSLIEGM 644


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 259/506 (51%), Gaps = 6/506 (1%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +  IL +L+    +  +  ++  M+  G++PN   +NIL+   C+   +  A+ +L ++ 
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIE 182
             G  PD ++  T +   C  GQ+ +A     + +A+ F      Y  LINGLCK  +  
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  LL  +  + +  +V+ YSTII S+C   NV  +  +  +M  R  + NI ++++L+
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+ + G+  +A  L+N+M  E   P+V  ++ L+   C  G + EA +    M +    
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 312

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P++ TY++L+DG+     +  A  I N M   G +  V +Y  ++   C+  M  QA  L
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKL 372

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            ++M  +   PN +T+N+ I GLC  GR+ +A++L+D M      P+I TY+ +LD L +
Sbjct: 373 FKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCK 432

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            + V +A  L+ +++  GI+ N+ TY  ++ G+C+ G + +A  +   +L++G  L   T
Sbjct: 433 NHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT 492

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           + ++I  +C  G  + A+ LL +++      PD I+Y  ++  + +     +A   L++M
Sbjct: 493 YTVMIQGFCSHGLFDEALSLLSKMKDNS-CIPDAITYEIIICSLFDKDENDKAEKLLREM 551

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
           +  G+  +F  +     S  +   H 
Sbjct: 552 ITRGLLYSFLEYGSWSLSFMAAPAHF 577



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/476 (27%), Positives = 237/476 (49%), Gaps = 5/476 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  +       L +F ++   G+KP    +N +++             + + + 
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP+  T N  +K  C   ++  A     ++   G   D VSY T+++ +CK+G+  
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192

Query: 153 EARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A EL  R         V +Y+ +I+ +CK+  + +AF L  EMV R I  N++TYS +I
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           S  C VG ++ ++G+  +M     NP++++F  L+  +   GR  EA +    M+++G  
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 312

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P++V Y++L+ G C    ++ A S+   M        V +Y+ +I+GF K   +  A ++
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKL 372

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      PNV+ Y  ++  LC++     A  LI+ M      P+ +T+++ +  LC 
Sbjct: 373 FKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCK 432

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
              VD A+ LL ++K     PN+ TY  L+DGL +  R+++A  +  ++   G  L + T
Sbjct: 433 NHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT 492

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           Y  ++ G C  G+  EA  LL KM       DAIT+ III +   + + + A +LL
Sbjct: 493 YTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLL 548



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 242/512 (47%), Gaps = 41/512 (8%)

Query: 53  FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           FY I  F    T    N ++DA+   N     NP   +M+          +  +L +L K
Sbjct: 33  FYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDME----------FGQILGSLVK 82

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALI 172
           +        L  +M  +G  P+ V++  +++  C+LG                       
Sbjct: 83  SKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGL---------------------- 120

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
                   I  AF +L +++  G +P+ IT +T I   C  G +  +L    ++   G +
Sbjct: 121 --------IPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            +  S+ +L+ G    G T  A +L  R+  +    +VV YST+I  +C + ++++A  +
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M       N+ TYSALI GF   G L  A  ++N+M S   +P+V  +  +V   C+
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A + +  M  +   P+ VT+N+ + G C    V+ A  +L+ M        + +
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRS 352

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN +++G  ++  V +A +L  E+    I  N++TYN+++ G+C++G +  A +L+  M 
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMH 412

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G + D IT++ I+ A CK   V+ AI LL +++  G   P++ +YT L+ G+C  G +
Sbjct: 413 DRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG-IRPNMYTYTILIDGLCKGGRL 471

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++A    + +L +G      T+ V+++   S+
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSH 503



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/529 (25%), Positives = 246/529 (46%), Gaps = 37/529 (6%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN   +VG    AL++  R+    ++  V +Y+ I+D++  +   +    +YS M   
Sbjct: 180 TLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSR 239

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            +  N+ TY+ L+   C   ++  A  L  +M ++   PD  ++  +V + CK G+V+EA
Sbjct: 240 RISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEA 299

Query: 155 RE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +  LAM    G+      YN+L++G C  +++  A  +L  M  RG+   V +Y+ +I+ 
Sbjct: 300 KNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVING 359

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C +  V+ ++ +  +M  +   PN+ ++ SL+ G    GR   A +L + M   G  P+
Sbjct: 360 FCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPD 419

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ YS+++  LC N  +D+A+++  ++++    PN+ TY+ LIDG  K G L  A  I+ 
Sbjct: 420 IITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFE 479

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            ++  G +  V  YT M++  C + +F +A SL+ KM   +C P+ +T+   I  L    
Sbjct: 480 DLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKD 539

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
             D A KLL +M     L +   Y       +       A  L  +  +C        + 
Sbjct: 540 ENDKAEKLLREMITRGLLYSFLEYGSWSLSFM----AAPAHFLNNDSLQCTSSQESGNWA 595

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC---KQGKVNNAIQLLDRI 506
            +L        V+    +  K        D    ++IIY+ C   KQG +          
Sbjct: 596 KLLLERIYCDCVLTKSNMRDK--------DVECPSVIIYSTCDWSKQGYI---------- 637

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
                   D+ +YT ++ G C+ G   E+   L KM   G  P+  T++
Sbjct: 638 -------LDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 230/486 (47%), Gaps = 56/486 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M    +S +   + ++I+ +  VG  + A+ +F ++    + P V  +N ++DA  
Sbjct: 232 LYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFC 291

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R        + M + G++P++ TYN L+   C  N V+ A  +L  M ++G      
Sbjct: 292 KEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  +++  CK+  V++A +L       +    V  YN+LI+GLCK  +I  A  L+  M
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            DRG  P++ITYS+I+ +LC    V+ ++ +L ++  +G  PN++++T L+ G   GGR 
Sbjct: 412 HDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +++  ++ +G+   V  Y+ +I G CS+G  DEA+S+  +M++NSC P+  TY  +
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEII 531

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I           A ++   MI+ G   + + Y                      ++F   
Sbjct: 532 ICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSW------------------SLSFMAA 573

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-------------KQYECLPNITTYNELLD 418
           P + +  N  ++        +WA  LL+++             K  EC P++  Y+    
Sbjct: 574 PAHFLN-NDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVEC-PSVIIYS---- 627

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
                           +  K G  L++ TY  ++ G C  G+  E+  LL KM + G   
Sbjct: 628 --------------TCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIP 673

Query: 479 DAITFN 484
           DA+T++
Sbjct: 674 DAVTYD 679



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 163/353 (46%), Gaps = 56/353 (15%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + +L  M   GV+ +   +  VIN + ++ + +QA+K+F  +    + P V  YN
Sbjct: 330 EVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYN 389

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M   G +P++ TY+ +L ALCKN+ VD A  LL+++ ++
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 449

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+  +YT ++  +CK G++E+AR      L   +   V+ Y  +I G C     +EA
Sbjct: 450 GIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEA 509

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF------ 238
             LL +M D    P+ ITY  II SL D    + +  +L +M  RG    ++SF      
Sbjct: 510 LSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL---LYSFLEYGSW 566

Query: 239 --------TSLLKGYLLGGRTHEASDLWNRMI---------------------------- 262
                      L    L   + + S  W +++                            
Sbjct: 567 SLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIY 626

Query: 263 ------REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
                 ++G++ +V  Y+ +I G CS+G  DE++++  +ME N C P+  TY 
Sbjct: 627 STCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 52/285 (18%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I     L+  M   G       + S++++  +  L ++A+ +  ++++ G
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  Y  ++D L    R      I+ ++   G    V TY ++++  C +   D A 
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEAL 510

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR--------FGS-GVSV 167
            LL +M +  C PDA++Y  I+ S+    + ++A    RE+  R        +GS  +S 
Sbjct: 511 SLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSF 570

Query: 168 YNALINGL------CKEHKIEEAFW--LLCE------------MVDRGID-PNVITYST- 205
             A  + L      C   + E   W  LL E            M D+ ++ P+VI YST 
Sbjct: 571 MAAPAHFLNNDSLQCTSSQ-ESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTC 629

Query: 206 ----------------IISSLCDVGNVETSLGILGQMFVRGCNPN 234
                           +I   C  G  + SL +L +M V GC P+
Sbjct: 630 DWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPD 674


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 251/524 (47%), Gaps = 6/524 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF  + + +  +GL E+A + F R+R F   P  +  N +L  L       ++   +++
Sbjct: 220 GVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 279

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P+VFTYN+++  LCK   ++ + +L V+M   G +PD V+Y +++    K+G 
Sbjct: 280 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 339

Query: 151 VEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +EE   L            +  YN LIN  CK  K+  AF    EM + G+ PNV+TYST
Sbjct: 340 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I + C  G ++ ++ +   M   G  PN  ++TSL+      G   EA  L N M++ G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              N+V Y+ L+ GLC  G M EA  V   M ++   PN   Y+AL+ G+ KA  +  A 
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +I  +M      P+++ Y  ++   C      +   ++E+M       N V   T I   
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 579

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+   A+    +M+       I TY  L+DGL +   V+ A +    +   G+Q N+
Sbjct: 580 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNV 639

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             Y +++ G+C+   +  A +L  +M   G   D   F  +I    K G +  A+ L+ R
Sbjct: 640 AVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISR 699

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           +        D+  YTSL+ G    G + +A  +  +M+ +GI P
Sbjct: 700 MTELA-IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 742



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 247/502 (49%), Gaps = 5/502 (0%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V+     M   G++ S   +  +I+   + G  E + ++F ++RE GL P V  YN ++D
Sbjct: 273 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 332

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                     +  +++ MK  G  P++ TYN L+   CK  ++  A++   EM N G  P
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 392

Query: 134 DAVSYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGLCKEHKIEEAFWLL 188
           + V+Y+T++ + CK G ++ A +L +   R G       Y +LI+  CK   + EA+ LL
Sbjct: 393 NVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 452

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+  G+  N++TY+ ++  LC  G +  +  +   M   G +PN   +T+L+ GY+  
Sbjct: 453 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 512

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  +A  +  +M      P+++ Y ++I G CS   ++E   +  +M+      N    
Sbjct: 513 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 572

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + +ID + KAG    A   +  M   G    +V Y  ++  LC+  +   A     +M  
Sbjct: 573 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               PN   + + I GLC    ++ A KL D+M+     P+IT +  L+DG L+   ++E
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 692

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  L++ + +  I+ ++  Y +++ G  + G + +A +   +M+ +G   + +    ++ 
Sbjct: 693 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752

Query: 489 AYCKQGKVNNAIQLLDRIRGGG 510
            Y K+G+++ AI+L + +   G
Sbjct: 753 EYYKRGQLDEAIELKNEMERMG 774



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 231/476 (48%), Gaps = 5/476 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L ++ +++  + L  QM+  G+S     + S+I+ Y +VG  E+   +F  +++ G
Sbjct: 295 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 354

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN +++      +       +S MK +G++PNV TY+ L+ A CK   + GA 
Sbjct: 355 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 414

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGL 175
           KL V+M   G  P+  +YT+++ + CK G + EA +L    ++ G  +++  Y AL++GL
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++ EA  +   M+  GI PN   Y+ ++        +E ++ IL QM      P++
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + S++ G+    +  E   +   M   G   N V  +T+I      G   +A++   +
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++      + TY  LIDG  KAG +  A   + RM+S G  PNV  YT ++  LC+NN 
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M      P+   F   I G    G +  A+ L+ +M +     ++  Y  
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           L+ G  +   + +A +   E+ + GI    V    +L    + G + EA +L  +M
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 229/506 (45%), Gaps = 42/506 (8%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF- 161
           +++L     +   ++ A +    M N    P A S   ++  + K G  +  R+      
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           G+G++     YN +I+ LCKE  +E +  L  +M + G+ P+V+TY+++I     VG++E
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
               +  +M   GC P+I ++  L+  Y    +   A + ++ M   G  PNVV YSTLI
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C  G M  A+ +   M      PN  TY++LID   KAGNL  A ++ N M+  G  
Sbjct: 402 DAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 461

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            N+V YT ++  LC+     +A  +   M  +   PN   +   + G     R++ AMK+
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 521

Query: 398 LDQMKQYECLPNITTY-----------------------------------NELLDGLLR 422
           L QM +    P++  Y                                     ++D   +
Sbjct: 522 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFK 581

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             +  +A     E++  G++  IVTY  ++ G+C+AG+V  A     +ML  G + +   
Sbjct: 582 AGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAV 641

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  +I   CK   + +A +L D ++  G   PDI ++T+L+ G    G +QEA + + +M
Sbjct: 642 YTSLIDGLCKNNCIESAKKLFDEMQCRG-MTPDITAFTALIDGNLKHGNLQEALVLISRM 700

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
               I  +   +  LV S FS  G L
Sbjct: 701 TELAIEFDLHVYTSLV-SGFSQCGEL 725



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 216/439 (49%), Gaps = 6/439 (1%)

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LINGLCKEHKIEEAF 185
           C   +  +  + S   +LG +EEA E   R  +  ++  A     L++ L K    +   
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +M+  GI P+V TY+ +I  LC  G++E S  +  QM   G +P++ ++ SL+ GY
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   E + L+N M   G +P+++ Y+ LI+  C    M  A     +M+ N   PNV
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS LID F K G + GA +++  M   G  PN   YT ++   C+     +A  L+  
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M       N VT+   + GLC  GR+  A ++   M +    PN   Y  L+ G ++  R
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +++A +++ ++ +C I+ +++ Y +I+ G C    + E   +L +M   G   + +    
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           II AY K GK ++A+     ++  G     I++Y  L+ G+C +G ++ A  Y  +ML+ 
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVG-VEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSL 633

Query: 546 GICPNFATWNVLVRSLFSN 564
           G+ PN A +  L+  L  N
Sbjct: 634 GLQPNVAVYTSLIDGLCKN 652



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 219/446 (49%), Gaps = 5/446 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+   ++ V  L  +MK  G       +  +IN Y +     +A + F  ++  G
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 389

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y+ ++DA   E        ++ +M+R G+ PN FTY  L+ A CK   +  A+
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
           KLL +M   G   + V+YT ++  +CK G++ EA E+       G+S    VY AL++G 
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++E+A  +L +M +  I P++I Y +II   C    +E +  IL +M  RG + N 
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
              T+++  Y   G++ +A + +  M   G    +V Y  LI GLC  G ++ AV    +
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCR 629

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PNV  Y++LIDG  K   +  A ++++ M   G +P++ A+T ++    ++  
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  LI +M       +   + + + G   CG +  A K  ++M +   LP       
Sbjct: 690 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 749

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGI 441
           LL    +  ++ EA EL  E+E+ G+
Sbjct: 750 LLREYYKRGQLDEAIELKNEMERMGL 775



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 30/258 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +L++MK  G+S +  +  ++I++Y + G +  AL  F  +++ G++ T+  Y 
Sbjct: 549 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 608

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L       +    +  M   G++PNV  Y  L+  LCKNN ++ A KL  EM  +
Sbjct: 609 VLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR 668

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  PD  ++T                              ALI+G  K   ++EA  L+ 
Sbjct: 669 GMTPDITAFT------------------------------ALIDGNLKHGNLQEALVLIS 698

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M +  I+ ++  Y++++S     G +  +     +M  +G  P       LL+ Y   G
Sbjct: 699 RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 758

Query: 250 RTHEASDLWNRMIREGFL 267
           +  EA +L N M R G +
Sbjct: 759 QLDEAIELKNEMERMGLI 776


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 267/551 (48%), Gaps = 28/551 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++  + R+GLA+   ++   +   G    V  +N ++D        S+   +   M+++G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMG---------------------NKGCAPD 134
           +  ++ +YN L+   CK    D A  LL E+                      N     D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 135 AVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            ++YTTI+S+ CK   +EEAR L        F   V  Y++++NGLCK+ ++ EA  LL 
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM   G+DPN + Y+T+I SL   G+   +     Q+ VRG   ++   T+L+ G     
Sbjct: 298 EMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSS 357

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  EA D++  + +   +PN + Y+ LI G C  G M+   S+  +MEE    PNV TYS
Sbjct: 358 KPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYS 417

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++I+G+ K G L  A  +  +M+     PN   Y  ++   C+      A  L  +M   
Sbjct: 418 SIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLS 477

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               N V F+  +  L    R+D A +LL  +     L +   Y  L+DG  +  +   A
Sbjct: 478 GLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAA 537

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             +V E+ +  I  ++VTYN +++G+   G   EA  +   M+  G   +  T+NI+I A
Sbjct: 538 LNMVEEMTEKSIPFDVVTYNVLINGLLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKA 596

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           YCKQG+++NA++L + ++   +  P  I+  +L+ G+  +G +++A   L +M   GI P
Sbjct: 597 YCKQGELDNALELWNEMK-SHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHP 655

Query: 550 NFATWNVLVRS 560
           N     VL+ +
Sbjct: 656 NLVIHRVLLNA 666



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 160/601 (26%), Positives = 279/601 (46%), Gaps = 65/601 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE---------FGLKPTVK- 66
           L+++M+ EG+      + ++IN + + G  ++A  + + I E         F +   +K 
Sbjct: 169 LVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKK 228

Query: 67  -----------IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
                       Y  I+     ++       +Y  M  +G  P+V TY+ ++  LCK+ R
Sbjct: 229 DDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGR 288

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR----------- 160
           +  A +LL EM   G  P+ V+YTT++ S+ K G   EA     +L +R           
Sbjct: 289 LSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTT 348

Query: 161 -----FGSGVS--------------------VYNALINGLCKEHKIEEAFWLLCEMVDRG 195
                F S                        Y ALI+G CK   +E    LL EM ++ 
Sbjct: 349 LVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I+PNVITYS+II+     G ++ ++ ++ +M  +   PN + +  L+ GY   G+   A+
Sbjct: 409 INPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           DL+N M   G   N V +  L++ L     MDEA  +   +       +   Y++L+DGF
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            KAG    A  +   M       +VV Y  ++  L ++  + +A S+   M      PN 
Sbjct: 529 FKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQ 587

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T+N  IK  C  G +D A++L ++MK ++ +P+  T N L+ GL     +++A  ++ E
Sbjct: 588 ATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNE 647

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   GI  N+V +  +L+   ++G      Q+  +++  G K++   +N +I  +C+   
Sbjct: 648 MSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRM 707

Query: 496 VNNAIQLLD-RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
              A  +L   IR G  +  D ++Y +L+ G C S  +++A     +MLNEG+ PN  T+
Sbjct: 708 TKKATSVLKYMIRDG--FVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTY 765

Query: 555 N 555
           N
Sbjct: 766 N 766



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/589 (24%), Positives = 260/589 (44%), Gaps = 68/589 (11%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q LL++MK  GV  +   + ++I+S  + G A +A     ++   G+   + +   ++D 
Sbjct: 293 QELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDG 352

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L   ++      ++  + +  + PN  TY  L+   CK   ++    LL EM  K   P+
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
            ++Y++I                              ING  K+  ++EA  ++ +M+D+
Sbjct: 413 VITYSSI------------------------------INGYTKKGILDEAINVMKKMLDQ 442

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
            I PN   Y+ +I   C  G  E +  +  +M + G   N   F  L+     G R  EA
Sbjct: 443 NIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEA 502

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
            +L   +   G L + V Y++L+ G    G    A+++  +M E S P +V TY+ LI+G
Sbjct: 503 EELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLING 562

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             + G    A  +++ MI  G +PN   Y  M+K  C+      A  L  +M      P+
Sbjct: 563 LLEHGK-YEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPS 621

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           ++T NT + GL   G ++ AM +L++M      PN+  +  LL+   +  +     ++  
Sbjct: 622 SITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHE 681

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++   G+++N   YN ++   CR  M  +A  +L  M+ +G   D +T+N +I  YC+  
Sbjct: 682 QLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESS 741

Query: 495 KVNNAI-----------------------------------QLLDRIRGGGEWNPDIISY 519
            V  A+                                   +L D+++  G  NPD  +Y
Sbjct: 742 HVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENG-LNPDASTY 800

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            +L+ G    G  +E+     +M+ +G  P  +T+NVL+ S F+ +G +
Sbjct: 801 DTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLI-SDFAKVGKM 848



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/567 (23%), Positives = 264/567 (46%), Gaps = 59/567 (10%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK--- 112
           +R+  + PT+ ++N ++    A    S +  IY+ M    + PNV+T+N+L+ A CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 113 -----------------------------NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                                        +  V+ A+  L  M  K    D ++   +V 
Sbjct: 61  LILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVK 120

Query: 144 SICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
             C++G  +    +     SG     V  +N LI+G CK  ++  A  L+  M   G+  
Sbjct: 121 GFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS 180

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIH--------------------S 237
           ++++Y+T+I+  C  G  + +  +L ++   RG   ++                     +
Sbjct: 181 DIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLIT 240

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +T+++  Y       EA  L+  MI  GFLP+VV YS++++GLC +G + EA  +  +M+
Sbjct: 241 YTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMK 300

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    PN   Y+ LID   KAG+   A    ++++  G + ++V  T +V  L +++   
Sbjct: 301 KMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPK 360

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  +   ++  N  PN++T+   I G C  G ++    LL +M++    PN+ TY+ ++
Sbjct: 361 EAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSII 420

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G  +   + EA  ++ ++    I  N   Y  ++ G C+AG    A  L  +M + G K
Sbjct: 421 NGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLK 480

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           ++ + F++++    +  +++ A +LL  +   G    D ++YTSL+ G   +G    A  
Sbjct: 481 VNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLL-LDHVNYTSLMDGFFKAGKESAALN 539

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
            +++M  + I  +  T+NVL+  L  +
Sbjct: 540 MVEEMTEKSIPFDVVTYNVLINGLLEH 566



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 257/519 (49%), Gaps = 32/519 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++ V+ LLQ+M+ + ++ +   + S+IN Y + G+ ++A+ +  ++ +  + P   +Y 
Sbjct: 393 DMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYA 452

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D      +  +   +Y+ MK  G++ N   +++L+  L +  R+D A +LL ++ ++
Sbjct: 453 ILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSR 512

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G   D V+YT+                              L++G  K  K   A  ++ 
Sbjct: 513 GLLLDHVNYTS------------------------------LMDGFFKAGKESAALNMVE 542

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM ++ I  +V+TY+ +I+ L + G  E    +   M   G  PN  ++  ++K Y   G
Sbjct: 543 EMTEKSIPFDVVTYNVLINGLLEHGKYEAK-SVYSGMIEMGLAPNQATYNIMIKAYCKQG 601

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
               A +LWN M     +P+ +  +TL+ GL   G +++A++V  +M      PN+  + 
Sbjct: 602 ELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHR 661

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L++  +K+G      Q+  +++  G   N  AY  ++ V C+  M  +A S+++ M  +
Sbjct: 662 VLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRD 721

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               +TVT+N  I+G C    V  A+    QM      PNI TYN LL GLL    + E 
Sbjct: 722 GFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAER 781

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL  ++++ G+  +  TY+T++ G  + G   E+ +L  +M+ +G      T+N++I  
Sbjct: 782 DELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISD 841

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
           + K GK++ A +LL+ ++  G   P   +Y  L+ G CN
Sbjct: 842 FAKVGKMDQARELLNEMQVRG-VPPSSSTYDILICGWCN 879



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 216/482 (44%), Gaps = 29/482 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L     +D  + LL+ +   G+      + S+++ + + G    AL M   + E  
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  YN +++ LL   ++     +YS M   G+ PN  TYNI++KA CK   +D A 
Sbjct: 549 IPFDVVTYNVLINGLLEHGKYEA-KSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNAL 607

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +L  EM +    P +++  T+V  + + G++E+A  +      M     + ++  L+N  
Sbjct: 608 ELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNAS 667

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K      +  ++VD G+  N   Y+ +I   C +   + +  +L  M   G   + 
Sbjct: 668 SKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADT 727

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L++GY       +A   + +M+ EG  PN+V Y+ L+ GL   G M E   +  +
Sbjct: 728 VTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDK 787

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+EN   P+ +TY  LI G+ K GN   + +++  M++ G  P    Y  ++    +   
Sbjct: 788 MKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGK 847

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             QA  L+ +M     PP++ T++  I G C                      N++ + +
Sbjct: 848 MDQARELLNEMQVRGVPPSSSTYDILICGWC----------------------NLSKHPD 885

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L   L ++ R  +A  L+TE+   G      T   I     R G +++A +LL ++    
Sbjct: 886 LDRTLKKIYRT-DAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHA 944

Query: 476 TK 477
            K
Sbjct: 945 NK 946


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 239/455 (52%), Gaps = 5/455 (1%)

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS-GVS 166
           C++     +  LL  M  KG  PD +  T ++     L  + +A    E+  +FG   V 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNALING CK ++I++A  +L  M  +   P+ +TY+ +I SLC  G ++ +L +L Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
               C P + ++T L++  +L G   EA  L + M+  G  P++  Y+T+I G+C  G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A  +   +E     P+V +Y+ L+      G      ++  +M S  C PNVV Y+ +
Sbjct: 280 DRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC++    +A +L++ M  +   P+  +++  I   C  GR+D A++ L+ M    C
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           LP+I  YN +L  L +  +  +A E+  ++ + G   N  +YNT+   +  +G  + A  
Sbjct: 400 LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALH 459

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           ++ +M+  G   D IT+N +I   C++G V+ A +LL  +R   E++P +++Y  +L G 
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR-SCEFHPSVVTYNIVLLGF 518

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +  +++A   L+ M+  G  PN  T+ VL+  +
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 212/407 (52%), Gaps = 5/407 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN + ++   + A ++  R+R     P    YN ++ +L +  +  +   + + +  D
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             +P V TY IL++A      VD A KL+ EM ++G  PD  +Y TI+  +CK G V+ A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282

Query: 155 RELAMRF---GSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E+       GS   V  YN L+  L  + K EE   L+ +M     DPNV+TYS +I++
Sbjct: 283 FEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G +E ++ +L  M  +G  P+ +S+  L+  +   GR   A +    MI +G LP+
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC NG  D+A+ +  ++ E  C PN ++Y+ +      +G+ + A  +  
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+SNG  P+ + Y  M+  LC+  M  +A  L+  M      P+ VT+N  + G C   
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           R++ A+ +L+ M    C PN TTY  L++G+       EA EL  ++
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 239/472 (50%), Gaps = 10/472 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL+ M  +G +    +   +I  +  +    +A+++   + +FG +P V  YN +++  
Sbjct: 110 HLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGF 168

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              NR      +   M+     P+  TYNI++ +LC   ++D A K+L ++ +  C P  
Sbjct: 169 CKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV 228

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++YT ++ +    G V+EA +L     +      +  YN +I G+CKE  ++ AF ++  
Sbjct: 229 ITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRN 288

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +  +G +P+VI+Y+ ++ +L + G  E    ++ +MF   C+PN+ +++ L+      G+
Sbjct: 289 LELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGK 348

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L   M  +G  P+  +Y  LI   C  G +D A+     M  + C P++  Y+ 
Sbjct: 349 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 408

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++    K G    A +I+ ++   GCSPN  +Y  M   L  +    +A  +I +M    
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+N+ I  LC  G VD A +LL  M+  E  P++ TYN +L G  + +R+++A 
Sbjct: 469 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 528

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            ++  +   G + N  TY  ++ G+  AG   EA +L   ++    ++DAI+
Sbjct: 529 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV----RIDAIS 576



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 204/377 (54%), Gaps = 6/377 (1%)

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I    C  GN   SL +L  M  +G NP++   T L+KG+       +A  +   + + G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V AY+ LI+G C    +D+A  V  +M      P+  TY+ +I      G L  A 
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ N+++S+ C P V+ YT +++         +A  L+++M      P+  T+NT I+G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI--EKCGIQL 443
           C  G VD A +++  ++     P++ +YN LL  LL   + +E  +L+T++  EKC    
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC--DP 331

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N+VTY+ ++  +CR G + EA  LL  M  +G   DA +++ +I A+C++G+++ AI+ L
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + +   G   PDI++Y ++L  +C +G   +A     K+   G  PN +++N +  +L+S
Sbjct: 392 ETMISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450

Query: 564 NLGHLGPVYILDDIMAN 580
           +   +  ++++ ++M+N
Sbjct: 451 SGDKIRALHMILEMMSN 467



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 202/403 (50%), Gaps = 5/403 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    +L +M+ +  S     +  +I S    G  + ALK+  ++     +PTV  Y 
Sbjct: 173 RIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYT 232

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A + E        +   M   G++P++FTYN +++ +CK   VD A++++  +  K
Sbjct: 233 ILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK 292

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  PD +SY  ++ ++   G+ EE  +L  +  S      V  Y+ LI  LC++ KIEEA
Sbjct: 293 GSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M ++G+ P+  +Y  +I++ C  G ++ ++  L  M   GC P+I ++ ++L  
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A +++ ++   G  PN  +Y+T+   L S+G    A+ +  +M  N   P+
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+++I    + G +  A ++   M S    P+VV Y  ++   C+ +    A +++E
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
            M    C PN  T+   I+G+   G    AM+L + + + + +
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 183/353 (51%), Gaps = 5/353 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L  + ++D    +L Q+  +    +   +  +I +    G  ++ALK+   +   G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN I+  +  E        +  N++  G EP+V +YNILL+AL    + +   
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGE 318

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           KL+ +M ++ C P+ V+Y+ +++++C+ G++EEA   L +    G++     Y+ LI   
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E +++ A   L  M+  G  P+++ Y+T++++LC  G  + +L I G++   GC+PN 
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ ++       G    A  +   M+  G  P+ + Y+++I  LC  G +DEA  +   
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           M      P+V TY+ ++ GF KA  +  A  +   M+ NGC PN   YT +++
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 162/580 (27%), Positives = 294/580 (50%), Gaps = 35/580 (6%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGL--KPTVKIYNHILDALLAENRFSMINPIYSN 90
            +SV++ + +    ++A   F  +R      KP+V +YN +L++ + E R   ++ +Y +
Sbjct: 78  LLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKD 137

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P  +T+N+L++ALC ++ VD A +L  EM  KGC P+  ++  +V   CK G 
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197

Query: 151 VEEAREL--AMR-FG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            ++  EL  AM  FG      +YN +++  C+E + +++  ++ +M + G+ P+++T+++
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257

Query: 206 IISSLCDVGNVETSLGILGQM----FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            IS+LC  G V  +  I   M    ++    PN  ++  +LKG+   G   +A  L+  +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
                L ++ +Y+  + GL  +G   EA +V  QM +    P++ +Y+ L+DG  K G L
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  I   M  NG  P+ V Y C++   C       A SL+++M   NC PN  T N  
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +  L   GR+  A +LL +M +     +  T N ++DGL     + +A E+V  +   G 
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497

Query: 442 QL-----------------------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
                                    +++TY+T+L+G+C+AG   EA  L  +M+ E  + 
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D++ +NI I+ +CKQGK+++A ++L  +   G  +  + +Y SL+ G+     + E    
Sbjct: 558 DSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG-CHKSLETYNSLILGLGIKNQIFEIHGL 616

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           + +M  +GI PN  T+N  ++ L           +LD++M
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 264/536 (49%), Gaps = 32/536 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D  + L  +M  +G   +E  F  ++  Y + GL ++ L++   +  FG
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   IYN I+ +   E R      +   M+ +G+ P++ T+N  + ALCK  +V  A 
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNAL 171
           ++  +M          P++++Y  ++   CK+G +E+A+ L  ++R     + +  YN  
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GL +  K  EA  +L +M D+GI P++ +Y+ ++  LC +G +  +  I+G M   G 
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+  ++  LL GY   G+   A  L   M+R   LPN    + L+H L   G + EA  
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEE 452

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNL--------------------LGASQIW--- 328
           +  +M E     +  T + ++DG   +G L                    LG S I    
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + +I N C P+++ Y+ ++  LC+   F +A +L  +M  E   P++V +N FI   C  
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G++  A ++L  M++  C  ++ TYN L+ GL   N++ E   L+ E+++ GI  NI TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTY 632

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           NT +  +C    V +A  LL +M+ +    +  +F  +I A+CK    + A ++ +
Sbjct: 633 NTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 227/499 (45%), Gaps = 29/499 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++  + +VGL E A  +F  IRE     +++ YN  L  L+   +F     +   M   G
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P++++YNIL+  LCK   +  A  ++  M   G  PDAV+Y  ++   C +G+V+ A+
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416

Query: 156 EL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L    MR     + Y  N L++ L K  +I EA  LL +M ++G   + +T + I+  L
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476

Query: 211 CDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLKGYLL 247
           C  G ++ ++ I+  M V G                       C P++ ++++LL G   
Sbjct: 477 CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCK 536

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            GR  EA +L+  M+ E   P+ VAY+  IH  C  G +  A  V   ME+  C  ++ T
Sbjct: 537 AGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLET 596

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y++LI G      +     + + M   G SPN+  Y   ++ LC+      A +L+++M 
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +N  PN  +F   I+  C     D A ++ +      C      Y+ + + LL   ++ 
Sbjct: 657 QKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLL 715

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A EL+  +   G +L    Y  ++  +C+   +  A  +L KM+  G   D      +I
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVI 775

Query: 488 YAYCKQGKVNNAIQLLDRI 506
               K G    A    D++
Sbjct: 776 DGLGKMGNKKEANSFADKM 794



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 154/344 (44%), Gaps = 26/344 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    +++ M+V G         ++ NSY  +GL + +L       E    P +  Y+
Sbjct: 481 ELDKAIEIVKGMRVHG----SAALGNLGNSY--IGLVDDSLI------ENNCLPDLITYS 528

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+ L    RF+    +++ M  + ++P+   YNI +   CK  ++  A+++L +M  K
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEA 184
           GC     +Y +++  +    Q+ E   L       G+S     YN  I  LC+  K+E+A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM+ + I PNV ++  +I + C V + + +  +  +  V  C      ++ +   
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNE 707

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            L  G+  +A++L   ++  GF      Y  L+  LC    ++ A  + ++M +     +
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFD 767

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM--------ISNGCSPNV 340
                 +IDG  K GN   A+   ++M        ++N   PN 
Sbjct: 768 PAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 27/268 (10%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           E +GEK + D V Y               +FI   + + + G    A ++   + + G  
Sbjct: 549 EMMGEKLQPDSVAY--------------NIFI---HHFCKQGKISSAFRVLKDMEKKGCH 591

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
            +++ YN ++  L  +N+   I+ +   MK  G+ PN+ TYN  ++ LC+  +V+ A  L
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNL 651

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-------YNALINGL 175
           L EM  K  AP+  S+  ++ + CK+   + A+E+   F + VS+       Y+ + N L
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEV---FETAVSICGQKEGLYSLMFNEL 708

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               ++ +A  LL  ++DRG +     Y  ++ SLC    +E + GIL +M  RG   + 
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            +   ++ G    G   EA+   ++M+ 
Sbjct: 769 AALMPVIDGLGKMGNKKEANSFADKMME 796



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 77/167 (46%), Gaps = 3/167 (1%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF-G 60
           I+ L E  +++    LL +M  + ++ +   F  +I ++ +V   + A ++F       G
Sbjct: 636 IQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            K    +Y+ + + LLA  +      +   +   G E   F Y  L+++LCK + ++ A 
Sbjct: 696 QKEG--LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV 167
            +L +M ++G   D  +   ++  + K+G  +EA   A +     SV
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASV 800


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 278/573 (48%), Gaps = 12/573 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + +L  MK  GV  +   +   I  Y R    E+A  ++  +   G+   V   +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  + RFS    ++  M + G  PN  TY  L+ +L K  R      LL EM ++
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-------SGVSVYNALINGLCKEHKIE 182
           G   D V+YT ++  + K G+ +E ++  +RF        +GV+ Y  LI+ LCK H ++
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKD-TLRFALSDNLSPNGVT-YTVLIDALCKAHNVD 396

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +L EM ++ I PNV+T+S++I+     G ++ +      M  RG NPN+ ++ +L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+        A ++++ M+ EG   N     +L++GL  NG ++EA+++      +   
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +   Y+ LIDG  KAG++  A +    ++     P+ V Y   +  LC    F +A S 
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M      P+  T+NT I   C  G    A+KLL +MK     PN+ TYN L+ GL  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              V++A  L+ E+   G   + +T+  +L    ++  +     +   M+  G   D   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N ++   C  G    A  +L+ + G G   PD I++ +L+ G C S  +  AF    +M
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 543 LNEGICPNFATWNVLVRSLFS--NLGHLGPVYI 573
           L++ I PN AT+N L+  L S   +G  G V I
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 250/496 (50%), Gaps = 13/496 (2%)

Query: 72  LDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           L+ALL  + R  ++ P  + ++     P    YNILL AL  +     A  +L EM  +G
Sbjct: 76  LNALLYSHCRLRLLRPAIALLRSS--RPTTVAYNILLAALSDHAH---APAVLAEMCKRG 130

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
              D V+  T+++ +C+ GQV+ A  LA R G G+       +N LI G C+      A 
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADR-GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   M  +G+  +V+ Y+T+++  C  G V+ + G+L  M   G +PN+ ++T  +  Y
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA DL+  M+R G L +VV  S L+ GLC +G   EA ++  +M++    PN 
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY  LID  AKAG       +   M+S G   ++V YT ++  L +     +    +  
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              +N  PN VT+   I  LC    VD A ++L +M++    PN+ T++ +++G ++   
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + +A E    +++ GI  N+VTY T++ G  +      A ++   ML EG K++    + 
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           ++    + GK+  A+ L     G G  + D ++YT+L+ G+  +G M  AF + Q++++ 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSG-LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 546 GICPNFATWNVLVRSL 561
            + P+   +NV +  L
Sbjct: 549 NMLPDAVVYNVFINCL 564



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/525 (25%), Positives = 250/525 (47%), Gaps = 31/525 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L +M+ + +S +   F SVIN + + GL ++A +    ++E G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  ++D             +Y +M  +G++ N F  + L+  L +N +++ A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +    G + D V+YTT                              LI+GL K   
Sbjct: 505 ALFKDASGSGLSLDHVNYTT------------------------------LIDGLFKAGD 534

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF    E++DR + P+ + Y+  I+ LC +G  + +   L +M   G  P+  ++ +
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT 594

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++  +   G T +A  L + M      PN++ Y+TL+ GL   G++++A  +  +M    
Sbjct: 595 MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  T+  ++   +++  L     I   M++ G   ++  Y  +++VLC + M  +A 
Sbjct: 655 FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++E+M      P+T+TFN  I G C    +D A     QM      PNI T+N LL GL
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             V R+ EA  ++ E+EK G++ N +TY+ +  G  +    VEA +L  +M+ +G     
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            T+N +I  + K G +  A +L   ++  G  +P   +Y  L+ G
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRG-VHPTSCTYDILVSG 878



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 196/422 (46%), Gaps = 11/422 (2%)

Query: 158 AMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           A+RF  +  +  NAL+   C+   +  A  LL     R   P  + Y+ ++++L D  + 
Sbjct: 65  AIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSDHAHA 119

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L +M  RG   +  +  +LL G    G+   A+ L +R      L +V+ ++TL
Sbjct: 120 P---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTL 175

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G    A+SV+ +M     P +V  Y+ L+ GF +AG +  A  + + M   G 
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV  YT  +   C+     +A  L E M       + VT +  + GLC  GR   A  
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  +M +    PN  TY  L+D L +  R KE   L+ E+   G+ +++VTY  ++  + 
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G   E    L   L +    + +T+ ++I A CK   V+ A Q+L  +      +P++
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK-SISPNV 414

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
           ++++S++ G    G + +A  Y + M   GI PN  T+  L+   F   G    + +  D
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 577 IM 578
           ++
Sbjct: 475 ML 476



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 5/304 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L +M+  G+   +  + ++I S+ R G   +ALK+ + ++   +KP +  YN ++  L 
Sbjct: 576 FLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLF 635

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     + + M   G  P+  T+  +L+A  ++ R+D    +   M N G   D  
Sbjct: 636 GTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695

Query: 137 SYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y T++  +C  G   +A   L    GSG++     +NALI G CK   ++ AF    +M
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I PN+ T++T++  L  VG +  +  +L +M   G  PN  ++  L  G+      
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNK 815

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L+  M+ +GF+P V  Y+ LI      G M +A  +   M++    P   TY  L
Sbjct: 816 VEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDIL 875

Query: 312 IDGF 315
           + G+
Sbjct: 876 VSGW 879



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 40/249 (16%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  +YLL +M   G S S      V+ +  +    +  L +   +   GL   + +YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L           +   M   G+ P+  T+N L+   CK++ +D A+    +M ++ 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-------------------------------AM 159
            +P+  ++ T++  +  +G++ EA  +                               AM
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 160 R---------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           R         F   VS YNALI+   K   + +A  L  +M  RG+ P   TY  ++S  
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 211 CDVGNVETS 219
            D+   + S
Sbjct: 880 YDLAREQKS 888



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 62/149 (41%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +   +D       QM  + +S +   F +++     VG   +A  +   + + GL+P   
Sbjct: 741 KSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNL 800

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y+ +      ++       +Y  M   G  P V TYN L+    K   +  A +L  +M
Sbjct: 801 TYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDM 860

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             +G  P + +Y  +VS    L + ++++
Sbjct: 861 QKRGVHPTSCTYDILVSGWYDLAREQKSQ 889


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 162/556 (29%), Positives = 266/556 (47%), Gaps = 8/556 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF   I+ +R +G   +A  +F      G  PT+   N+++  LL  N   +   +Y +M
Sbjct: 174 VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSM 233

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
               + P+V+TY  ++KA CK   V     +L EM  K C P+  +Y   +  +C+ G V
Sbjct: 234 VEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAV 292

Query: 152 EEA---RELAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA   ++L M  G G     Y  L++G CK+ + +EA  +   M   G++PN  TY+ +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I      GN+E +L I  +M  RG   N+ ++ +++ G    G   +A  L+N M+  G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+   Y+ LI G   +  M +A  +  +M+     P+  TYS LI G   + +L  A++
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + ++MI NG  PNV  Y  ++K   Q + +  A  L++ M      P+   +N  I GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V+ A  LL  M +    PN  TY   ++   +   ++ A     ++   GI  N V
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y  ++ G C  G  VEA      ML +G   D   ++ II++  K GK   A+ +  + 
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL-FSNL 565
              G   PD+  Y SL+ G C  G +++A     +ML+ GI PN   +N L+    +   
Sbjct: 653 LKTGVV-PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711

Query: 566 GHLGPVYILDDIMANK 581
           G+L   + L D M +K
Sbjct: 712 GNLTEAFKLFDEMISK 727



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/546 (29%), Positives = 261/546 (47%), Gaps = 15/546 (2%)

Query: 26  VSCSEGVFISVI--NSYRRVGLAEQALKMFYRIR----EFGLKPTVKIYNHILDALLAEN 79
            S SEG F ++I  N+  R  L    + +F+++     E  + P V  Y +++ A     
Sbjct: 197 ASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVG 256

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
                  + S M+++  +PN+FTYN  +  LC+   VD A ++   M  KG  PD  +YT
Sbjct: 257 DVIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYT 315

Query: 140 TIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDR 194
            +V   CK  + +EA+ +      SG++     Y ALI+G  KE  IEEA  +  EM+ R
Sbjct: 316 LLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITR 375

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+  NV+TY+ +I  +   G +  ++ +  +M + G  P+  ++  L+ GYL      +A
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKA 435

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
            +L   M      P+   YS LI GLC +  + +A  V  QM  N   PNV  Y  LI  
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           + +      A ++   MI+NG  P++  Y C++  LC+     +A  L+  M  +   PN
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             T+  FI      G +  A +    M     +PN   Y  L+ G   V    EA     
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            + + G+  +I  Y+ I+H + + G   EA  +  K L  G   D   +N +I  +CK+G
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLL--WGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            +  A QL D +   G  NP+I+ Y +L+  +G C SG + EAF    +M+++GI P+  
Sbjct: 676 DIEKASQLYDEMLHNG-INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGY 734

Query: 553 TWNVLV 558
            + +L+
Sbjct: 735 IYCILI 740



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/572 (27%), Positives = 278/572 (48%), Gaps = 11/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  + +  E+     L  +M + G+      +  +I+ Y +     +A ++   ++   
Sbjct: 387 MIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P+   Y+ ++  L   +     N +   M R+G++PNVF Y  L+KA  + +R + A 
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +LL  M   G  PD   Y  ++  +C+  +VEEA+ L +  G          Y A IN  
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  +I+ A     +M+  GI PN + Y+ +I   CDVGN   +L     M  +G  P+I
Sbjct: 567 SKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI 626

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++++      G+T EA  ++ + ++ G +P+V  Y++LI G C  G +++A  +  +
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 296 MEENSCPPNVTTYSALID--GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           M  N   PN+  Y+ LI+  G+ K+GNL  A ++++ MIS G SP+   Y  ++    + 
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 746

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A SL  + A +    +   FN+ I   C  G+V  A +L D M   +  PNI TY
Sbjct: 747 GNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 805

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+D   +   ++EA +L  ++E   I  N +TY ++L    + G   +   L   M  
Sbjct: 806 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 865

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGM 532
            G   DAI + ++  AYCK+GK   A++LL++ +  G +   D+  + +L++ +C    +
Sbjct: 866 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDV--FDALIFHLCKEKQI 923

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
                 L +M  E +  +  T N L+   + +
Sbjct: 924 STVLELLSEMGKEELSLSSKTCNTLLLGFYKS 955



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 260/561 (46%), Gaps = 37/561 (6%)

Query: 5   LGEKCEIDGVQYLLQQMKV---EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           +G  C+   V   L+  K+   +G+      +  +++ + +   +++A  +F  +   GL
Sbjct: 283 IGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGL 342

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P    Y  ++D  + E        I   M   G++ NV TYN ++  + K   +  A  
Sbjct: 343 NPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMS 402

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKI 181
           L  EM   G  PD  +                              YN LI+G  K H +
Sbjct: 403 LFNEMLMAGIEPDTWT------------------------------YNLLIDGYLKSHDM 432

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            +A  LL EM  R + P+  TYS +IS LC   +++ +  +L QM   G  PN+  + +L
Sbjct: 433 AKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTL 492

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +K Y+   R   A +L   MI  G LP++  Y+ LI GLC    ++EA  +   M E   
Sbjct: 493 IKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGI 552

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  TY A I+ ++K+G +  A + +  M+S+G  PN V YT ++K  C      +A S
Sbjct: 553 KPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALS 612

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
             + M  +   P+   ++  I  L   G+   AM +  +  +   +P++  YN L+ G  
Sbjct: 613 TFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFC 672

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTIL--HGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           +   +++A +L  E+   GI  NIV YNT++  +G C++G + EAF+L  +M+ +G   D
Sbjct: 673 KEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPD 732

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
              + I+I    K+G +  A+ L    +     +  + ++ SL+   C  G + EA    
Sbjct: 733 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS--LSAFNSLIDSFCKHGKVIEARELF 790

Query: 540 QKMLNEGICPNFATWNVLVRS 560
             M+++ + PN  T+ +L+ +
Sbjct: 791 DDMVDKKLTPNIVTYTILIDA 811



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 202/407 (49%), Gaps = 3/407 (0%)

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
           GS ++V++  I+       + EA  +    +  G  P +I  + ++  L     +     
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWK 228

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           + G M      P+++++T+++K +   G   +   + + M +E   PN+  Y+  I GLC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLC 287

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G++DEA+ V   M E    P+  TY+ L+DGF K      A  I+  M S+G +PN  
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF 347

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++    +     +A  + ++M       N VT+N  I G+   G +  AM L ++M
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                 P+  TYN L+DG L+ + + +A EL+ E++   +  +  TY+ ++ G+C +  +
Sbjct: 408 LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A ++L +M+  G K +   +  +I AY ++ +   AI+LL  +   G   PD+  Y  
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL-PDLFCYNC 526

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           L+ G+C +  ++EA + L  M  +GI PN  T+   + +L+S  G +
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI-NLYSKSGEI 572



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 195/440 (44%), Gaps = 41/440 (9%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R    E+A  +   + E G+KP    Y   ++         +    + +M   G+ PN  
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNV 592

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            Y IL+K  C       A      M  KG  PD  +Y+ I+ S+ K G+ +EA  + ++F
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 162 -GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL--CDVG 214
             +GV     +YN+LI+G CKE  IE+A  L  EM+  GI+PN++ Y+T+I+    C  G
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSG 712

Query: 215 NVETSLGILGQMFVRGCNPN----------------------------------IHSFTS 240
           N+  +  +  +M  +G +P+                                  + +F S
Sbjct: 713 NLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNS 772

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  +   G+  EA +L++ M+ +   PN+V Y+ LI        M+EA  +   ME  +
Sbjct: 773 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 832

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN  TY++L+  + + GN      ++  M + G + + +AY  M    C+     +A 
Sbjct: 833 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 892

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L+ K   E        F+  I  LC   ++   ++LL +M + E   +  T N LL G 
Sbjct: 893 KLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGF 952

Query: 421 LRVNRVKEAFELVTEIEKCG 440
            +     EA +++  +++ G
Sbjct: 953 YKSGNEDEASKVLGVMQRLG 972



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 2/347 (0%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N+  F   +  + + G  +EAS ++   I EGF P ++  + L+  L     M     V 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M E    P+V TY+ +I    K G+++    + + M    C PN+  Y   +  LCQ 
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQT 289

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  + + M  +   P+  T+   + G C   R   A  + + M      PN  TY
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+DG ++   ++EA  +  E+   G++LN+VTYN ++ G+ +AG + +A  L  +ML+
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G + D  T+N++I  Y K   +  A +LL  ++   +  P   +Y+ L+ G+C+S  +Q
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK-ARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +A   L +M+  G+ PN   +  L+++      +   + +L  ++AN
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 154/354 (43%), Gaps = 41/354 (11%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+S  + G  ++A+ +F +  + G+ P V +YN ++     E      + +Y  M
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 92  KRDGMEPNVFTYNILLK--ALCKNNRVDGAYKLLVEMGNKGCAPDAV------------- 136
             +G+ PN+  YN L+     CK+  +  A+KL  EM +KG +PD               
Sbjct: 688 LHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 747

Query: 137 ---------------------SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNA 170
                                ++ +++ S CK G+V EAREL       +    +  Y  
Sbjct: 748 NLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 807

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI+   K   +EEA  L  +M  R I PN +TY++++ S   +GN    + +   M  RG
Sbjct: 808 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
              +  ++  +   Y   G++ EA  L N+ + EG       +  LI  LC    +   +
Sbjct: 868 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 927

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +  +M +     +  T + L+ GF K+GN   AS++   M   G  P  ++ T
Sbjct: 928 ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLT 981



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 125/266 (46%), Gaps = 6/266 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+S    ++  +I+   + G  E+AL +F+  ++  +  ++  +N ++D+  
Sbjct: 720 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFC 778

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      ++ +M    + PN+ TY IL+ A  K   ++ A +L ++M  +   P+ +
Sbjct: 779 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 838

Query: 137 SYTTIVSSICKLGQ----VEEARELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT+++ S  ++G     +   +++  R        Y  + +  CKE K  EA  LL + 
Sbjct: 839 TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 898

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +  GI      +  +I  LC    + T L +L +M     + +  +  +LL G+   G  
Sbjct: 899 LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 958

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLI 277
            EAS +   M R G++P  ++ +  I
Sbjct: 959 DEASKVLGVMQRLGWVPTSLSLTDSI 984



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 115/269 (42%), Gaps = 54/269 (20%)

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP-----------------NTVTFNTFIKG 384
           +Y+ +   LC + + HQA +++EK+     PP                 N   F+ FI  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 385 LCGCGRVDWAM-----------------------------------KLLDQMKQYECLPN 409
               G ++ A                                    K+   M + + +P+
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           + TY  ++    +V  V +   +++E+EK   + N+ TYN  + G+C+ G V EA ++  
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M+ +G   D  T+ +++  +CKQ +   A  + + +   G  NP+  +YT+L+ G    
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG-LNPNRFTYTALIDGFIKE 359

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G ++EA     +M+  G+  N  T+N ++
Sbjct: 360 GNIEEALRIKDEMITRGLKLNVVTYNAMI 388



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 63/128 (49%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L + M+  G++C    +  + ++Y + G + +ALK+  +    G+K    +++ ++  L 
Sbjct: 859 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 918

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E + S +  + S M ++ +  +  T N LL    K+   D A K+L  M   G  P ++
Sbjct: 919 KEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL 978

Query: 137 SYTTIVSS 144
           S T  +S+
Sbjct: 979 SLTDSIST 986



 Score = 39.3 bits (90), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 69/257 (26%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+   ++  + L   M+   +  +   + S++ SY ++G                
Sbjct: 808 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG---------------- 851

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                             NRF MI+ ++ +M+  G+  +   Y ++  A CK  +   A 
Sbjct: 852 ------------------NRFKMIS-LFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 892

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLL    NK          ++V  I    ++E+             V++ALI  LCKE +
Sbjct: 893 KLL----NK----------SLVEGI----KLED------------DVFDALIFHLCKEKQ 922

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I     LL EM    +  +  T +T++      GN + +  +LG M   G  P   S T 
Sbjct: 923 ISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTD 982

Query: 241 LLKGYLLGGRTHEASDL 257
            +      GR    SD+
Sbjct: 983 SIS----TGRDDMKSDI 995


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 274/528 (51%), Gaps = 9/528 (1%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           +Y R  +   AL +  +++   L+ ++  YN +L  L       ++  +Y+ +K  G+  
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQ 233

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-- 156
           N +T  IL+  LC+ +R+  A   L E G +   P  VS+  ++S  CK+G V+ A+   
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 157 -LAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            + +++G    V  YN L++GLC    +EEA     +M + G++P+++TY+ + +    +
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +  ++ +M + G NP++ ++T L+ G+   G   E+  L  +M+ +G   ++V Y
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + L+  LC +G +DEAV + ++ME     P++ TYS LI G  K G +  A +++  M S
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCS 473

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               PN    + ++  L +     +A    + +   +     + +N  I G    G +  
Sbjct: 474 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 533

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++   Q+ +    P I T+N L+ G  +  ++ EA +L+  I+  G+    VTY T+++
Sbjct: 534 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 593

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C  G +   F +L +M  +  K   IT+ +++   CK+G+++ ++QLL  +   G + 
Sbjct: 594 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF- 652

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PD I+Y +++   C +  +Q+AF    +ML   + P+  T+NVL+  L
Sbjct: 653 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 278/555 (50%), Gaps = 6/555 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  +  +      L++   E    S   F ++++ + ++G  + A   F  + ++G
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  YN +L  L             ++M+  G+EP++ TYNIL         + GA+
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           K++  M   G  PD V+YT ++   C++G +EE+ +L  +  S      +  Y  L++ L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +I+EA  LL EM   G+ P+++TYS +I  LC  G VE ++ +  +M  +   PN 
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
              ++++ G    G   EA   ++ + +      ++ Y+ +I G    G++ EAV    Q
Sbjct: 481 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 540

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E    P + T+++LI GF K G L  A ++ + +  +G  P  V YT ++   C+   
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H    ++ +M  +   P  +T+   +KGLC  GR+  +++LL  M      P+  TYN 
Sbjct: 601 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 660

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++    + + +++AF+L  ++ +  +Q + VTYN +++G+C  G + +A +LL  +  + 
Sbjct: 661 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS 720

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            +L  + +  II A+C +G V NA+    ++   G +   I  Y++++  +C    + +A
Sbjct: 721 IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG-FEVSIRDYSAVINRLCKRNLITDA 779

Query: 536 FIYLQKMLNEGICPN 550
             +   ML  GI P+
Sbjct: 780 KFFFCMMLTHGIPPD 794



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 255/510 (50%), Gaps = 8/510 (1%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
            EFG  P+V  +N ++          +    +  M + G+ P+V++YNILL  LC    +
Sbjct: 264 EEFG--PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM 321

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNAL 171
           + A +   +M N G  PD V+Y  + +    LG +  A ++  R         +  Y  L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I G C+   IEE+F L  +M+ +G+  +++TY+ ++SSLC  G ++ ++ +L +M V G 
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P++ +++ L+ G    G   EA +L+  M  +   PN    S +I GL   G++ EA  
Sbjct: 442 KPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 501

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
               + ++     +  Y+ +IDG+AK GN+  A + + ++I  G SP +V +  ++   C
Sbjct: 502 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 561

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  L++ +      P +VT+ T + G C  G +     +L +M+     P   
Sbjct: 562 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 621

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY  ++ GL +  R+ E+ +L+  +   G+  + +TYNT++   C+A  + +AFQL  +M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           L    +   +T+N++I   C  G + +A +LL  ++         ++YT+++   C  G 
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS-IRLTKVAYTTIIKAHCAKGD 740

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Q A ++  +M+  G   +   ++ ++  L
Sbjct: 741 VQNALVFFHQMVERGFEVSIRDYSAVINRL 770



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 223/471 (47%), Gaps = 5/471 (1%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           N +R +GL   A K+  R+   GL P +  Y  ++              +   M   G++
Sbjct: 348 NGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLK 407

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            ++ TY +LL +LCK+ R+D A  LL EM   G  PD ++Y+ ++  +CK G VEEA EL
Sbjct: 408 LSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIEL 467

Query: 158 -----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                + R      V +A+I+GL ++  I EA      +    +   +I Y+ +I     
Sbjct: 468 YEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAK 527

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +GN+  ++    Q+  +G +P I +F SL+ G+   G+  EA  L + +   G +P  V 
Sbjct: 528 LGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 587

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+TL++G C  G M     + ++ME  +  P   TY+ ++ G  K G L  + Q+   M 
Sbjct: 588 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY 647

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           + G  P+ + Y  +++  C+ +   +A  L  +M   +  P+ VT+N  I GLC  G + 
Sbjct: 648 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 707

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A +LL  ++          Y  ++        V+ A     ++ + G +++I  Y+ ++
Sbjct: 708 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 767

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           + +C+  ++ +A      ML  G   D     +++ A+ + G  N+  ++ 
Sbjct: 768 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 818



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 164/343 (47%), Gaps = 5/343 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L EK  I   Q     +    V+    ++  +I+ Y ++G   +A++ + +I E G
Sbjct: 486 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 545

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PT+  +N ++     + + +    +   +K  G+ P   TY  L+   C+   +   +
Sbjct: 546 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 605

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGL 175
            +L EM  K   P  ++YT +V  +CK G++ E+ +L    +  G+      YN +I   
Sbjct: 606 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 665

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK H +++AF L  +M+   + P+ +TY+ +I+ LC  GN++ +  +L  +  +      
Sbjct: 666 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 725

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+++K +   G    A   +++M+  GF  ++  YS +I+ LC    + +A      
Sbjct: 726 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 785

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           M  +  PP+      +++ F ++G+     +I+  MI  G  P
Sbjct: 786 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 156/311 (50%), Gaps = 4/311 (1%)

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H+A  +  +M       ++  Y++L++ L     M +   V  +++ +  P N  T   L
Sbjct: 185 HDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNEYTNPIL 241

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  +   L  A             P+VV++  ++   C+      A S    M     
Sbjct: 242 IDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGL 301

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  ++N  + GLC  G ++ A++  + M+ +   P+I TYN L +G   +  +  A++
Sbjct: 302 LPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWK 361

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +V  +   G+  ++VTY  ++ G C+ G + E+F+L  KML +G KL  +T+ +++ + C
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G+++ A+ LL  +   G   PD+++Y+ L+ G+C  G ++EA    ++M ++ I PN 
Sbjct: 422 KSGRIDEAVILLHEMEVIG-LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480

Query: 552 ATWNVLVRSLF 562
              + ++  LF
Sbjct: 481 FVCSAIISGLF 491



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 33/255 (12%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT------------------ 380
           N V +  +     +  M H A  ++ KM   N   +  T+N+                  
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEI 226

Query: 381 --------------FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                          I GLC   R+  A+  L +    E  P++ ++N L+ G  ++  V
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
             A      + K G+  ++ +YN +LHG+C AG + EA +    M   G + D +T+NI+
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
              +   G ++ A +++ R+   G  NPD+++YT L+ G C  G ++E+F   +KML++G
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNG-LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 547 ICPNFATWNVLVRSL 561
           +  +  T+ VL+ SL
Sbjct: 406 LKLSIVTYTVLLSSL 420



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%)

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           +F +   N V ++           V  A+ +L +MK      +I TYN LL  L   + +
Sbjct: 160 SFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIM 219

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
              +++  EI+  G+  N  T   ++ G+CR   + +A   L +   E      ++FN +
Sbjct: 220 ---WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNAL 276

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +  +CK G V+ A      +   G   PD+ SY  LL G+C +G M+EA  +   M N G
Sbjct: 277 MSGFCKMGSVDVAKSFFCMMIKYGLL-PDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335

Query: 547 ICPNFATWNVL 557
           + P+  T+N+L
Sbjct: 336 VEPDIVTYNIL 346


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 262/537 (48%), Gaps = 42/537 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRD 94
           VI    R G  + A     R+   G       ++ +L  L  + R S  ++     M   
Sbjct: 102 VIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPAL 161

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEM----GNKGCAPDAVSYTTIVSSICKLGQ 150
           G  PN F+YNILLK LC  NR   A  LL  M       GC PD VSYTT+         
Sbjct: 162 GCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV--------- 212

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                                INGL +E ++++A+ L  EM+D+G+ PN ITY+ ++   
Sbjct: 213 ---------------------INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGY 251

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  + ++GI  +M   G  P++ ++ +L+      GR+ EA  +++ M+++G  P+ 
Sbjct: 252 CSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDS 311

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y TL+HG  + G + +   +   M  N   P+   ++ LI  +AK G +  A   +++
Sbjct: 312 SIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSK 371

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  PN+V Y  ++  LC+      A S  +++  E   PN V F T I GLC C +
Sbjct: 372 MRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDK 431

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLR---VNRVKEAFELVTEIEKCGIQLNIVT 447
            D A +L  +M      PN   +N LL+ L +   V R K  F+L+  ++   +Q +++T
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD---VQCDVIT 488

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y T++ G C  G V EA +LL  M+++G K + +T+N II  YCK G++ +A  L  ++ 
Sbjct: 489 YTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMA 548

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G  NP I+ Y+++L G+  +  +  A      M+  GI     T+N++++ L  N
Sbjct: 549 SKG-VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQN 604



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 253/528 (47%), Gaps = 16/528 (3%)

Query: 46  AEQALKMFYRI----REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           ++QAL + + +       G  P V  Y  +++ LL E +      ++  M   GM PN  
Sbjct: 183 SQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCI 242

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TYN LL   C + +   A  +  +M   G  PD V+Y T++  +CK G+  EAR++   F
Sbjct: 243 TYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV---F 299

Query: 162 GSGV--------SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            S V        S+Y  L++G   E  + +   LL  MV  G  P+   ++ +I +    
Sbjct: 300 DSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKH 359

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V+ ++    +M  +G +PNI ++ +++      G+  +A   ++R+I EG  PN V +
Sbjct: 360 GMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVF 419

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
            TLIHGLC+    D+A  ++ +M      PN   ++ L++   K G +  A  I++ M+ 
Sbjct: 420 RTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVR 479

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
                +V+ YT ++   C +    +A  L+E M  +   PN VT+NT I G C  GR++ 
Sbjct: 480 VDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIED 539

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A  L  QM      P I  Y+ +L GL +  R+  A EL   + KCGI+L I TYN IL 
Sbjct: 540 ACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQ 599

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C+     +A ++   + +    L   TFNI+I A  K G+ + A  L   +   G   
Sbjct: 600 GLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARG-LV 658

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P++++Y  ++  +   G ++E       +   G   +    N LV  L
Sbjct: 659 PNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKL 706



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 261/517 (50%), Gaps = 24/517 (4%)

Query: 69  NHILDALLAENRFSM--INPIYSNMKRDGM-----------EPNVFTYNILLKALCKNNR 115
           +H+ D LL  +  S+  +N   S + R+               ++ TY+I++    +   
Sbjct: 52  HHLFDELLRRDTTSIFDLNSALSAVARESPAVALSLFNRMPRADLCTYSIVIGCCSRAGH 111

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YN 169
           +D A+  L  +   G    A++++ ++  +C   +  +A ++A+R    +        YN
Sbjct: 112 LDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYN 171

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDR----GIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
            L+ GLC E++ ++A  LL  M+      G  P+V++Y+T+I+ L   G ++ +  +  +
Sbjct: 172 ILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDE 231

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +G +PN  ++  LL GY   G+  EA  ++ +M R+G  P+VV Y+TL+  LC NG 
Sbjct: 232 MLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGR 291

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
             EA  V   M +    P+ + Y  L+ G+A  G L+   Q+ + M+ NG  P+   +  
Sbjct: 292 SMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNI 351

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++    ++ M  +A     KM  +   PN VT+ T +  LC  G+VD AM   D++    
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             PN   +  L+ GL   ++  +A EL  E+   GI  N + +NT+L+ +C+ GMV  A 
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAK 471

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +   M+    + D IT+  +I  YC  GKV+ A +LL+ +   G   P+ ++Y +++ G
Sbjct: 472 NIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDG-VKPNEVTYNTIING 530

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            C +G +++A    ++M ++G+ P    ++ ++  LF
Sbjct: 531 YCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLF 567



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 224/450 (49%), Gaps = 5/450 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G + +A K+F  + + G KP   IY  +L     E     ++ +   M R+G +P+ + +
Sbjct: 290 GRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           NIL+ A  K+  VD A     +M  +G  P+ V+Y T++ ++C++G+V++A     R  S
Sbjct: 350 NILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLIS 409

Query: 164 -GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G++    V+  LI+GLC   K ++A  L  EM+ RGI PN I ++T+++ LC  G V  
Sbjct: 410 EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTR 469

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  I   M       ++ ++T+L+ GY L G+  EA+ L   M+ +G  PN V Y+T+I+
Sbjct: 470 AKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIIN 529

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C NG +++A S+  QM      P +  YS ++ G  +   +  A +++  MI  G   
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKL 589

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            +  Y  +++ LCQNN    A  +   +   +      TFN  I  L   GR D A  L 
Sbjct: 590 PIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLF 649

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             +     +PN+ TY  ++  L+    ++E  +L   +EK G   +    N ++  + + 
Sbjct: 650 ASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQK 709

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           G V +A   L K+      L+A T   +++
Sbjct: 710 GEVRKAGVYLSKIDENNFSLEASTAESLVF 739



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 175/428 (40%), Gaps = 77/428 (17%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +  LL  M   G      +F  +I +Y + G+ ++A+  F ++R+ GL P +  Y  ++D
Sbjct: 330 MHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMD 389

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           AL    +       +  +  +G+ PN   +  L+  LC  ++ D A +L VEM  +G  P
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449

Query: 134 -----------------------------------DAVSYTTIVSSICKLGQVEEAREL- 157
                                              D ++YTT++   C  G+V+EA +L 
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLL 509

Query: 158 -AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL-- 210
             M    GV      YN +ING CK  +IE+A  L  +M  +G++P ++ YSTI+  L  
Sbjct: 510 EGMVL-DGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQ 568

Query: 211 --------------------CDVGNVETSLGILGQ---------MFVRGCNPNIH----S 237
                                 +G     L  L Q         MF   C  + H    +
Sbjct: 569 TRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRT 628

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F  ++   L GGR  EA DL+  ++  G +PNVV Y  ++  L   G ++E   +   +E
Sbjct: 629 FNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLE 688

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +N C  +    +AL+    + G +  A    +++  N  S        +V ++       
Sbjct: 689 KNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVFLVSSGKYDQ 748

Query: 358 QAHSLIEK 365
             +S+ EK
Sbjct: 749 HINSIPEK 756



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + ++ TY+ ++    RAG +  AF  LG+++  G    AITF+ ++   C   + ++A+ 
Sbjct: 93  RADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMD 152

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE----GICPNFATWNVL 557
           +  R        P+  SY  LL G+C+    Q+A   L  M+ +    G  P+  ++  +
Sbjct: 153 IALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212

Query: 558 VRSLFSNLGHLGPVYILDDIMANK 581
           +  L    G L   Y L D M ++
Sbjct: 213 INGLLRE-GQLDKAYCLFDEMLDQ 235


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 142/467 (30%), Positives = 242/467 (51%), Gaps = 6/467 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           E N +T NI++ + CK+   D A  ++ EM  +   PD V++  ++ +  + G V+ A  
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213

Query: 157 LAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L     +     G+  +N+++ GLCK  + ++A  +   M    + P+V +++ +I   C
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            VG VE ++    +M  RG  P++ SF+ L+  +   G+   A+     M   G +P+ V
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV 333

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ +I G C  GSM EA+ V  +M    C P+V TY+ L++G  K   LL A ++ N M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G +P++  +T ++   C++  F +A  L + +  +   P+ V +N+ I G+C  G +
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A +L D M   E  PN  TY+ L+D      +V+EAF  + E+   G   NI+TYN+I
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G CR+G V +  Q L KM+ +    D ITFN +I+ Y K+  ++ A  + + I     
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFN-IMEKEM 572

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             PD ++Y  ++ G    G M+EA    +KM   GI P+  T+  L+
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 254/475 (53%), Gaps = 6/475 (1%)

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           F   + + S M++  + P+V T+N+L+ A  +   VD A  L+  M NKG  P  V++ +
Sbjct: 173 FDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS 232

Query: 141 IVSSICKLGQVEEAREL--AM---RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++  +CK  + ++A+E+  AM        V  +N LI G C+  ++EEA     EM  RG
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+V+++S +I      G ++ +   L +M   G  P+   +T ++ G+   G   EA 
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            + + M+  G LP+VV Y+TL++GLC    + +A  +  +M+E    P++ T++ LI G+
Sbjct: 353 RVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGY 412

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            + GN   A Q+++ ++     P+VVAY  ++  +C+     +A+ L + M      PN 
Sbjct: 413 CRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNH 472

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT++  I   C  G+V+ A   LD+M     LPNI TYN ++ G  R   VK+  + + +
Sbjct: 473 VTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQK 532

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + +  I  +++T+NT++HG  +   +  AF +   M  E  + DA+T+N+II  + +QG 
Sbjct: 533 MMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGN 592

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           +  A ++  ++ G     PD  +Y SL+ G   +G  +EAF    +M++ G  P+
Sbjct: 593 MEEAGRVFKKM-GASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 233/458 (50%), Gaps = 6/458 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  +N ++DA            +  +M   G++P + T+N +LK LCK+ R D A ++
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCK 177
              M     APD  S+  ++   C++G+VEEA    +E+  R     V  ++ LI     
Sbjct: 250 FRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             K++ A   L EM   G+ P+ + Y+ +I   C  G++  +L +  +M   GC P++ +
Sbjct: 310 RGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVT 369

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +LL G     R  +A +L N M   G  P++  ++TLIHG C +G+ ++A+ +   + 
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLL 429

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P+V  Y++LIDG  + G+L  A+++W+ M +    PN V Y+ ++   C+     
Sbjct: 430 HQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVE 489

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A   +++M  +   PN +T+N+ IKG C  G V    + L +M Q   LP++ T+N L+
Sbjct: 490 EAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLI 549

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            G ++   +  AF +   +EK  +Q + VTYN I++G    G + EA ++  KM   G +
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIE 609

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            D  T+  +I  +   G    A QL D +   G + PD
Sbjct: 610 PDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG-FAPD 646



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 220/481 (45%), Gaps = 40/481 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+    +  E D    ++ +M+   V         +I++  R G  + A+ +   +   G
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  +N +L  L    RF     ++  M +  + P+V ++NIL+   C+   V+ A 
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282

Query: 121 KLLVEMGNKGCAPDAVS-----------------------------------YTTIVSSI 145
           K   EM  +G  PD VS                                   YT ++   
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 146 CKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C+ G + EA   R+  +  G    V  YN L+NGLCK+H++ +A  LL EM +RG+ P++
Sbjct: 343 CRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDL 402

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            T++T+I   C  GN E +L +   +  +   P++ ++ SL+ G    G   +A++LW+ 
Sbjct: 403 CTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDD 462

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M      PN V YS LI   C  G ++EA     +M      PN+ TY+++I G+ ++GN
Sbjct: 463 MHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGN 522

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +    Q   +M+ +   P+++ +  ++    +    H A ++   M  E   P+ VT+N 
Sbjct: 523 VKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNM 582

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G    G ++ A ++  +M      P+  TY  L++G +     KEAF+L  E+   G
Sbjct: 583 IINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRG 642

Query: 441 I 441
            
Sbjct: 643 F 643



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 214/411 (52%), Gaps = 38/411 (9%)

Query: 151 VEEARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
            EEA  L +   S V+ Y  N +++  CK  + ++A  ++ EM  R + P+V+T++ +I 
Sbjct: 141 AEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID 200

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           +    G+V+ ++ ++                                   + M  +G  P
Sbjct: 201 ARFRAGDVDAAIALV-----------------------------------DSMANKGLKP 225

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
            +V +++++ GLC +   D+A  V   M++ S  P+V +++ LI GF + G +  A + +
Sbjct: 226 GIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFY 285

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M   G +P+VV+++C++ +         A + + +M      P+ V +   I G C  
Sbjct: 286 KEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRA 345

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G +  A+++ D+M    CLP++ TYN LL+GL + +R+ +A EL+ E+++ G+  ++ T+
Sbjct: 346 GSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF 405

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
            T++HG CR G   +A QL   +L +  + D + +N +I   C++G +  A +L D +  
Sbjct: 406 TTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHA 465

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             E  P+ ++Y+ L+   C  G ++EAF +L +M+++G  PN  T+N +++
Sbjct: 466 R-EIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIK 515



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 185/370 (50%), Gaps = 5/370 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++      ++M+  GV+     F  +I  +   G  + A      ++  GL P   IY 
Sbjct: 277 EVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYT 336

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++         S    +   M   G  P+V TYN LL  LCK +R+  A +LL EM  +
Sbjct: 337 MVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKER 396

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  ++TT++   C+ G  E+A +L       R    V  YN+LI+G+C++  + +A
Sbjct: 397 GVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKA 456

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  +M  R I PN +TYS +I S C+ G VE + G L +M  +G  PNI ++ S++KG
Sbjct: 457 NELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKG 516

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +      +M+++  LP+++ ++TLIHG     +M  A +V   ME+    P+
Sbjct: 517 YCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPD 576

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+ +I+GF++ GN+  A +++ +M ++G  P+   Y  ++          +A  L +
Sbjct: 577 AVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHD 636

Query: 365 KMAFENCPPN 374
           +M      P+
Sbjct: 637 EMMHRGFAPD 646



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 162/348 (46%), Gaps = 36/348 (10%)

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G  H A + +  ++      N    + ++H  C +   D+A +V  +ME+    P+V T
Sbjct: 135 AGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVT 194

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ LID   +AG++  A  + + M + G  P +V +  ++K LC++  F +A  +   M 
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD 254

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ---------YECL----------- 407
             +  P+  +FN  I G C  G V+ AMK   +M+Q         + CL           
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 408 ---------------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                          P+   Y  ++ G  R   + EA  +  E+   G   ++VTYNT+L
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G+C+   +++A +LL +M   G   D  TF  +I+ YC+ G    A+QL D +      
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQ-RL 433

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            PD+++Y SL+ G+C  G + +A      M    I PN  T+++L+ S
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDS 481



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 1/294 (0%)

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P    +  LI     +    EA      + ++  P   +  +AL+   ++AG    A + 
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  ++S+    N      MV   C++  F +A ++I +M      P+ VT N  I     
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G VD A+ L+D M      P I T+N +L GL +  R  +A E+   +++C +  ++ +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           +N ++ G CR G V EA +   +M   G   D ++F+ +I  +  +GK+++A   L  ++
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G G   PD + YT ++ G C +G M EA     +M+  G  P+  T+N L+  L
Sbjct: 325 GLG-LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGL 377



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 5/204 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ +  K ++     L   M    +  +   +  +I+S+   G  E+A      +   G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN I+                  M +D + P++ T+N L+    K   + GA+
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAF 562

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
            +   M  +   PDAV+Y  I++   + G +EEA  +  + G SG+      Y +LING 
Sbjct: 563 NVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGH 622

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPN 199
                 +EAF L  EM+ RG  P+
Sbjct: 623 VTAGNSKEAFQLHDEMMHRGFAPD 646


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 256/520 (49%), Gaps = 6/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P++  +  +L ++     +S +  +   M   G+ PN++T NIL
Sbjct: 50  DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 109

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C   R+  A+ +L ++   G  P+  ++ T++  +C  G++ E   L  +     F
Sbjct: 110 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 169

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      P+V+ Y++II SLC    V  +  
Sbjct: 170 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 229

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G +P+I ++ SL+            + L N M+    +PNVV +ST++  LC
Sbjct: 230 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 289

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M +    PNV TY+AL+DG      +  A ++++ M+  G +P+VV
Sbjct: 290 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 349

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y+ ++   C+     +A  L E+M  +   PNTVT++T + GLC  GR+  A+ L  +M
Sbjct: 350 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 409

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P+  +Y  LLD L +  R+ EA  L+  IE   +  +I  Y  ++ G+CRAG +
Sbjct: 410 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  L   +  +G   +  T+ I+I   C+QG +  A +L   ++  G ++P+  +Y  
Sbjct: 470 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG-YSPNGCTYNL 528

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  G   +         LQ+ML  G   + +T  VLV  L
Sbjct: 529 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 251/498 (50%), Gaps = 11/498 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           V  L  QM   G+  +      +INS+   +R+G A   L    +I + G +P +  +N 
Sbjct: 87  VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLA---KILKLGHQPNIATFNT 143

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L  E +   +  ++  M  +G +PNV TY  L+  LCK      A +LL  M    
Sbjct: 144 LIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 203

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C PD V YT+I+ S+CK  QV +A  L +     G+S     YN+LI+ LC   + +   
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 263

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EMV+  I PNV+ +ST++ +LC  G V  +  ++  M  RG  PN+ ++ +L+ G+
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 323

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L     EA  +++ M+ +GF P+VV+YSTLI+G C    +++A+ +  +M      PN 
Sbjct: 324 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS L+ G    G L  A  +++ M++ G  P+ V+Y  ++  LC+N    +A +L++ 
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +   N  P+   +   I G+C  G ++ A  L   +      PN+ TY  +++GL +   
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 503

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + EA +L  E+++ G   N  TYN I  G  R    +   QLL +ML  G   D  T  +
Sbjct: 504 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 563

Query: 486 IIYAYCKQGKVNNAIQLL 503
           ++      G   +  Q+L
Sbjct: 564 LVEMLSDDGLDQSVKQIL 581



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 257/503 (51%), Gaps = 6/503 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  ++      L + +++  FG+ P +   N ++++     R      + + + 
Sbjct: 71  FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL 130

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +PN+ T+N L++ LC   ++     L  +M  +G  P+ V+Y T+++ +CK+G   
Sbjct: 131 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 190

Query: 153 EARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  L      G     V VY ++I+ LCK+ ++ +AF L  EM+ +GI P++ TY+++I
Sbjct: 191 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 250

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +LC++   +    +L +M      PN+  F++++      G+  EA D+ + MI+ G  
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNVV Y+ L+ G C    MDEAV V   M      P+V +YS LI+G+ K   +  A  +
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      PN V Y+ ++  LC       A +L  +M      P+ V++   +  LC 
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R+D A+ LL  ++     P+I  Y  ++DG+ R   ++ A +L + +   G+  N+ T
Sbjct: 431 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  +++G+C+ G++ EA +L G+M  +G   +  T+N+I   + +  +    IQLL  + 
Sbjct: 491 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 550

Query: 508 GGGEWNPDIISYTSLLWGICNSG 530
             G ++ D+ + T L+  + + G
Sbjct: 551 ARG-FSADVSTSTVLVEMLSDDG 572



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 224/425 (52%), Gaps = 5/425 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + +I  V +L  +M  EG   +   + ++IN   +VG    A+++   + +  
Sbjct: 144 LIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 203

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V +Y  I+D+L  + + +    ++S M   G+ P++FTYN L+ ALC         
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 263

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGL 175
            LL EM N    P+ V ++T+V ++CK G+V EA ++  M    GV      YNAL++G 
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 323

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +++EA  +   MV +G  P+V++YST+I+  C +  +E ++ +  +M  +   PN 
Sbjct: 324 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++L+ G    GR  +A  L++ M+  G +P+ V+Y  L+  LC N  +DEA+++   
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +E ++  P++  Y+ +IDG  +AG L  A  +++ + S G  PNV  YT M+  LCQ  +
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 503

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L  +M  +   PN  T+N   +G          ++LL +M       +++T   
Sbjct: 504 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 563

Query: 416 LLDGL 420
           L++ L
Sbjct: 564 LVEML 568



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 372 PPN--TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           PP+  + + NTF         +D A+   ++M      P+I  + +LL  + ++      
Sbjct: 28  PPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTV 87

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L  +++  GI  NI T N +++  C    +  AF +L K+L  G + +  TFN +I  
Sbjct: 88  LSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 147

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC- 548
            C +GK+   + L D++ G G + P++++Y +L+ G+C  G    A I L + + +G C 
Sbjct: 148 LCVEGKIGEVLHLFDKMIGEG-FQPNVVTYGTLINGLCKVGSTSAA-IRLLRSMEQGNCQ 205

Query: 549 PNFATWNVLVRSL 561
           P+   +  ++ SL
Sbjct: 206 PDVVVYTSIIDSL 218



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 74/161 (45%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D    LL+ ++   +     ++  VI+   R G  E A  +F  +   G
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y  +++ L  +   +  + ++  MKR G  PN  TYN++ +   +NN      
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 543

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +LL EM  +G + D  + T +V  +   G  +  +++   F
Sbjct: 544 QLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 584


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 163/558 (29%), Positives = 272/558 (48%), Gaps = 11/558 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF ++ N    +G+ E+A + F+++ +F + P V+  N +L  L   ++  +    + +
Sbjct: 182 GVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKD 241

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P+VFTYN+++  L +   ++ A  L  EM  KG  PD V+Y +++    K+G 
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301

Query: 151 V-------EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           +       EE ++        V  YN+LIN  CK  +I +AF  L  M  RG+ PNV+TY
Sbjct: 302 LTGAVSVFEEMKDAGCE--PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTY 359

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           ST+I + C  G +  +      M   G  PN  ++TSL+      G  +EA  L + M +
Sbjct: 360 STLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQ 419

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G   N+V Y+ L+ GLC +G M EA  +   + +     N   Y++L  G+ KA  +  
Sbjct: 420 AGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEK 479

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  I   M      P+++ Y   +  LC+ N    + ++I +M       N+  + T I 
Sbjct: 480 AMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLID 539

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
                G+   A+ LL +M+       + TY  L+DGL ++  V++A      + + G+Q 
Sbjct: 540 AYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQP 599

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           NI+ Y  ++ G+C+   + EA  L  +ML +G   D + +  +I    K G    A+ L 
Sbjct: 600 NIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLR 659

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           +R+   G    D+ +YTSL+WG    G +Q A   L +ML +GI P+      L+R  + 
Sbjct: 660 NRMVEIG-MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYY- 717

Query: 564 NLGHLGPVYILDDIMANK 581
            LG +     L D MA +
Sbjct: 718 ELGDINEALALHDDMARR 735



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 236/499 (47%), Gaps = 5/499 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
             + M V G+S S   +  VI    R G  E A  +F  ++  GL+P +  YN ++D   
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                +    ++  MK  G EP+V TYN L+   CK  R+  A++ L  M  +G  P+ V
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+T++ + CK G + EA +     +R G       Y +LI+  CK   + EAF L  EM
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G++ N++TY+ ++  LC+ G +  +  + G +   G   N   +TSL  GY+     
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A D+   M ++   P+++ Y T I GLC    ++++++V  +M +     N   Y+ L
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTL 537

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ID + K G    A  +   M   G    VV Y  ++  LC+  +  QA    + M     
Sbjct: 538 IDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL 597

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN + +   I GLC    ++ A  L ++M      P+   Y  L+DG ++     EA  
Sbjct: 598 QPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALS 657

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   + + G++L++  Y +++ G  R G V  A  LL +ML +G   D +    ++  Y 
Sbjct: 658 LRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYY 717

Query: 492 KQGKVNNAIQLLDRIRGGG 510
           + G +N A+ L D +   G
Sbjct: 718 ELGDINEALALHDDMARRG 736



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 224/480 (46%), Gaps = 44/480 (9%)

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
           C P    + T+ + +  LG +EEAR+        R    V   N L++ L K  K   A 
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +MV  G+ P+V TY+ +I  L   G++E +  +  +M  +G  P+I ++ SL+ GY
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G    A  ++  M   G  P+V+ Y++LI+  C    + +A    + M++    PNV
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS LID F KAG LL A++ +  MI  G  PN   YT ++   C+    ++A  L  +
Sbjct: 357 VTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESE 416

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVD-------------W------------------- 393
           M       N VT+   + GLC  GR+              W                   
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476

Query: 394 ---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              AM +L++M +    P++  Y   + GL R N ++++  ++ E+  CG+  N   Y T
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++    + G   EA  LL +M   G K+  +T+ ++I   CK G V  A++  D +   G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGP 570
              P+I+ YT+L+ G+C +  ++EA     +ML++GI P+   +  L+     N+ H  P
Sbjct: 597 -LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLID---GNMKHGNP 652



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 228/476 (47%), Gaps = 27/476 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+   + G   + ++MK  G       + S+IN + +     QA +  + +++ G
Sbjct: 292 LIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRG 351

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P V  Y+ ++DA          N  + +M R G++PN FTY  L+ A CK   ++ A+
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAF 411

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALI 172
           KL  EM   G   + V+YT ++  +C+ G++ EA EL   FG+ +         +Y +L 
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEEL---FGALLKAGWTLNQQIYTSLF 468

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  K   +E+A  +L EM  + + P+++ Y T I  LC    +E S+ ++ +M   G  
Sbjct: 469 HGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLT 528

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N + +T+L+  Y   G+T EA +L   M   G    VV Y  LI GLC  G + +AV  
Sbjct: 529 ANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRY 588

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M  N   PN+  Y+ALIDG  K   L  A  ++N M+  G SP+ + YT ++     
Sbjct: 589 FDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI----D 644

Query: 353 NNMFH----QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            NM H    +A SL  +M       +   + + I G    G+V  A  LLD+M +   +P
Sbjct: 645 GNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIP 704

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCG-----IQLNI---VTYNTILHGVC 456
           +      LL     +  + EA  L  ++ + G     I + +   +T  T LH +C
Sbjct: 705 DQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLTAVTKLHKLC 760



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 3/265 (1%)

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
            N C P    +  L +     G L  A Q + +M      P V +   ++  L +++   
Sbjct: 174 RNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGG 233

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A S  + M      P+  T+N  I  L   G ++ A  L ++MK     P+I TYN L+
Sbjct: 234 LALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLI 293

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DG  +V  +  A  +  E++  G + +++TYN++++  C+   + +AF+ L  M   G +
Sbjct: 294 DGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ 353

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQ-LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            + +T++ +I A+CK G +  A +  +D IR G    P+  +YTSL+   C  G + EAF
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVG--LQPNEFTYTSLIDANCKIGDLNEAF 411

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
               +M   G+  N  T+  L+  L
Sbjct: 412 KLESEMQQAGVNLNIVTYTALLDGL 436


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 256/520 (49%), Gaps = 6/520 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P++  +  +L ++     +S +  +   M   G+ PN++T NIL
Sbjct: 41  DDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNIL 100

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C   R+  A+ +L ++   G  P+  ++ T++  +C  G++ E   L  +     F
Sbjct: 101 INSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGF 160

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LINGLCK      A  LL  M      P+V+ Y++II SLC    V  +  
Sbjct: 161 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 220

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G +P+I ++ SL+            + L N M+    +PNVV +ST++  LC
Sbjct: 221 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 280

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  V   M +    PNV TY+AL+DG      +  A ++++ M+  G +P+VV
Sbjct: 281 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 340

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y+ ++   C+     +A  L E+M  +   PNTVT++T + GLC  GR+  A+ L  +M
Sbjct: 341 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 400

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P+  +Y  LLD L +  R+ EA  L+  IE   +  +I  Y  ++ G+CRAG +
Sbjct: 401 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 460

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  L   +  +G   +  T+ I+I   C+QG +  A +L   ++  G ++P+  +Y  
Sbjct: 461 EAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG-YSPNGCTYNL 519

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  G   +         LQ+ML  G   + +T  VLV  L
Sbjct: 520 ITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 251/498 (50%), Gaps = 11/498 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           V  L  QM   G+  +      +INS+   +R+G A   L    +I + G +P +  +N 
Sbjct: 78  VLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLA---KILKLGHQPNIATFNT 134

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L  E +   +  ++  M  +G +PNV TY  L+  LCK      A +LL  M    
Sbjct: 135 LIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 194

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C PD V YT+I+ S+CK  QV +A  L +     G+S     YN+LI+ LC   + +   
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 254

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EMV+  I PNV+ +ST++ +LC  G V  +  ++  M  RG  PN+ ++ +L+ G+
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 314

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L     EA  +++ M+ +GF P+VV+YSTLI+G C    +++A+ +  +M      PN 
Sbjct: 315 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS L+ G    G L  A  +++ M++ G  P+ V+Y  ++  LC+N    +A +L++ 
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +   N  P+   +   I G+C  G ++ A  L   +      PN+ TY  +++GL +   
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 494

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + EA +L  E+++ G   N  TYN I  G  R    +   QLL +ML  G   D  T  +
Sbjct: 495 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 554

Query: 486 IIYAYCKQGKVNNAIQLL 503
           ++      G   +  Q+L
Sbjct: 555 LVEMLSDDGLDQSVKQIL 572



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 257/503 (51%), Gaps = 6/503 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  ++      L + +++  FG+ P +   N ++++     R      + + + 
Sbjct: 62  FTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL 121

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +PN+ T+N L++ LC   ++     L  +M  +G  P+ V+Y T+++ +CK+G   
Sbjct: 122 KLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTS 181

Query: 153 EARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  L      G     V VY ++I+ LCK+ ++ +AF L  EM+ +GI P++ TY+++I
Sbjct: 182 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 241

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +LC++   +    +L +M      PN+  F++++      G+  EA D+ + MI+ G  
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNVV Y+ L+ G C    MDEAV V   M      P+V +YS LI+G+ K   +  A  +
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      PN V Y+ ++  LC       A +L  +M      P+ V++   +  LC 
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R+D A+ LL  ++     P+I  Y  ++DG+ R   ++ A +L + +   G+  N+ T
Sbjct: 422 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  +++G+C+ G++ EA +L G+M  +G   +  T+N+I   + +  +    IQLL  + 
Sbjct: 482 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 541

Query: 508 GGGEWNPDIISYTSLLWGICNSG 530
             G ++ D+ + T L+  + + G
Sbjct: 542 ARG-FSADVSTSTVLVEMLSDDG 563



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 224/425 (52%), Gaps = 5/425 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + +I  V +L  +M  EG   +   + ++IN   +VG    A+++   + +  
Sbjct: 135 LIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN 194

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V +Y  I+D+L  + + +    ++S M   G+ P++FTYN L+ ALC         
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 254

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGL 175
            LL EM N    P+ V ++T+V ++CK G+V EA ++  M    GV      YNAL++G 
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 314

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +++EA  +   MV +G  P+V++YST+I+  C +  +E ++ +  +M  +   PN 
Sbjct: 315 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++L+ G    GR  +A  L++ M+  G +P+ V+Y  L+  LC N  +DEA+++   
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +E ++  P++  Y+ +IDG  +AG L  A  +++ + S G  PNV  YT M+  LCQ  +
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 494

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L  +M  +   PN  T+N   +G          ++LL +M       +++T   
Sbjct: 495 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 554

Query: 416 LLDGL 420
           L++ L
Sbjct: 555 LVEML 559



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 372 PPN--TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           PP+  + + NTF         +D A+   ++M      P+I  + +LL  + ++      
Sbjct: 19  PPHFLSSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTV 78

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L  +++  GI  NI T N +++  C    +  AF +L K+L  G + +  TFN +I  
Sbjct: 79  LSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRG 138

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC- 548
            C +GK+   + L D++ G G + P++++Y +L+ G+C  G    A I L + + +G C 
Sbjct: 139 LCVEGKIGEVLHLFDKMIGEG-FQPNVVTYGTLINGLCKVGSTSAA-IRLLRSMEQGNCQ 196

Query: 549 PNFATWNVLVRSL 561
           P+   +  ++ SL
Sbjct: 197 PDVVVYTSIIDSL 209



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 74/161 (45%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D    LL+ ++   +     ++  VI+   R G  E A  +F  +   G
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y  +++ L  +   +  + ++  MKR G  PN  TYN++ +   +NN      
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGI 534

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +LL EM  +G + D  + T +V  +   G  +  +++   F
Sbjct: 535 QLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 575


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 278/604 (46%), Gaps = 81/604 (13%)

Query: 34  ISVINSYRR----VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
            S++N+  R      +A ++L++  R+RE G++P+    + +   LL    +  +  +  
Sbjct: 208 FSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLR 267

Query: 90  NMKRDGM-----------------------------------EPNVFTYNILLKALCKNN 114
            M RDG                                    EP+V+ YNIL+ A     
Sbjct: 268 GMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRG 327

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYN 169
           R   A   L  M   GC P  ++++TI+++ C  G V EAR++      +     V++YN
Sbjct: 328 RTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYN 387

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT--------------------------- 202
            L++G  K   + +A  L  EM D+GI P+  T                           
Sbjct: 388 TLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLS 447

Query: 203 --------YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
                   Y   ++ LC  G ++ ++  L  M  +G  P++ +F S++  Y   G    A
Sbjct: 448 SLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNA 507

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
              +  M+  G +P+    S+++ GL   G + EA  + Y+M +   P N   ++ L+DG
Sbjct: 508 HKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDG 567

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           + K G+  GA  +W  M + G  P+ +A++  +  L +  +  +A+    +M+ +   PN
Sbjct: 568 YFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPN 627

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
              +N+ I GLC CG++  A+KL  +M+Q   LP+I T N +++G  +  R+K AF+   
Sbjct: 628 NFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFA 687

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+   G+  + VTYNT++ G C+   +V A + L KM   G   D  T+NI I  +C   
Sbjct: 688 EMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQ 747

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K++ A+ +LD +   G   P+ ++Y +++  +C +  +  A +   K+L     PN  T 
Sbjct: 748 KISRAVTMLDELIAVGV-VPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNVVTT 805

Query: 555 NVLV 558
           NVL+
Sbjct: 806 NVLL 809



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 235/505 (46%), Gaps = 41/505 (8%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN+YR  G    AL   + + + G KP++  ++ I+ A   E        I+  ++  G
Sbjct: 319 LINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVG 378

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PNV  YN L+    K   V  A  L  EM +KG APD  ++  +V+   K G+  ++ 
Sbjct: 379 LSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSY 438

Query: 156 ELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           EL   +         S+Y+  + GLC   +++EA   L +M+++G+ P+V+ ++++I++ 
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAY 498

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
              G  + +      M + G  P+  + +S+L G    GR  EA DL  +MI +G   N 
Sbjct: 499 SRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNK 558

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           VA++ L+ G    G    A S+ Y+ME     P+   +SA IDG +KAG +  A + ++ 
Sbjct: 559 VAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSE 618

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  PN   Y  ++  LC     H+A  L  +M  +   P+  T N  I G C  GR
Sbjct: 619 MSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGR 678

Query: 391 VDWAM--------------------------KLLDQMKQYECL---------PNITTYNE 415
           +  A                           K+LD +   E L         P+ITTYN 
Sbjct: 679 MKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNI 738

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            + G     ++  A  ++ E+   G+  N VTYNT+++ VC   M+  A  L  K+L   
Sbjct: 739 RIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMA 797

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAI 500
              + +T N+++  +CKQG    A+
Sbjct: 798 FVPNVVTTNVLLSHFCKQGMPEKAL 822



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 8/356 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D     L+ M  +G+  S   F SVI +Y R G  + A K +  +  FGL P+    +
Sbjct: 468 QLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCS 527

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L  + R      +   M   G+  N   + +LL    K     GA+ L  EM  +
Sbjct: 528 SMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEAR 587

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           G  PDA++++  +  + K G VEEA E         F     VYN+LI+GLC   K+ EA
Sbjct: 588 GICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEA 647

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  EM  +G+ P++ T + II+  C  G ++++     +M   G  P+  ++ +L+ G
Sbjct: 648 LKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGG 707

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y        A +  N+M   G+ P++  Y+  I G CS+  +  AV++  ++      PN
Sbjct: 708 YCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPN 767

Query: 305 VTTYSALIDGFAKAGNLLGASQIWN-RMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
             TY+ +++  A   ++L  + +   +++     PNVV    ++   C+  M  +A
Sbjct: 768 TVTYNTMMN--AVCTDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 200/457 (43%), Gaps = 37/457 (8%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           ++ S  S+ N L+ G        E+  +L  M + G+ P+    S +   L  VG+  + 
Sbjct: 203 KYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSV 262

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +L  M   G  P  H+F  ++  +   G    A  L   M +    P+V AY+ LI+ 
Sbjct: 263 WKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINA 322

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G   +A+   + M +N C P++ T+S +I  F   GN++ A +I+  +   G SPN
Sbjct: 323 YRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPN 382

Query: 340 VVAYTCMV------KVLCQNNMFHQ-----------------------------AHSLIE 364
           V  Y  ++      + +CQ NM ++                             ++ L  
Sbjct: 383 VAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFR 442

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
             +  +  P+   ++  + GLC  G++D AM+ L+ M +    P++  +N ++    R  
Sbjct: 443 DWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAG 502

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
               A +    +   G+  +  T +++L G+ + G + EA  LL KM+ +G  ++ + F 
Sbjct: 503 FEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFT 562

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           +++  Y K G    A  L   +   G   PD I++++ + G+  +G ++EA+    +M  
Sbjct: 563 VLLDGYFKVGDTAGAHSLWYEMEARG-ICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSK 621

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +G  PN   +N L+  L  N G L     L+  M  K
Sbjct: 622 KGFVPNNFVYNSLIHGL-CNCGKLHEALKLEREMRQK 657



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 160/343 (46%), Gaps = 32/343 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +K  +   + LL +M  +G+  ++  F  +++ Y +VG    A  ++Y +   G
Sbjct: 529 MLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARG 588

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    ++  +D L            +S M + G  PN F YN L+  LC   ++  A 
Sbjct: 589 ICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEAL 648

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL  EM  KG  PD  +   I+                              NG CKE +
Sbjct: 649 KLEREMRQKGLLPDIFTTNIII------------------------------NGFCKEGR 678

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++ AF    EM   G+ P+ +TY+T+I   C V ++ ++   L +M+  G +P+I ++  
Sbjct: 679 MKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNI 738

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
            ++G+    +   A  + + +I  G +PN V Y+T+++ +C++  +D A+ ++ ++ + +
Sbjct: 739 RIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMA 797

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             PNV T + L+  F K G +   + IW + ++     + + Y
Sbjct: 798 FVPNVVTTNVLLSHFCKQG-MPEKALIWGQKLNKLLRADFIGY 839



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 131/270 (48%), Gaps = 11/270 (4%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           G   L  +M+  G+      F + I+   + GL E+A + F  + + G  P   +YN ++
Sbjct: 576 GAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLI 635

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
             L    +      +   M++ G+ P++FT NI++   CK  R+  A+    EM + G  
Sbjct: 636 HGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVT 695

Query: 133 PDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGLCKEHKIEEAFWL 187
           PD V+Y T++   CK+  +  A E L   + SG    ++ YN  I G C   KI  A  +
Sbjct: 696 PDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTM 755

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L E++  G+ PN +TY+T+++++C    ++ ++ +  ++      PN+ +   LL  +  
Sbjct: 756 LDELIAVGVVPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCK 814

Query: 248 GGRTHEASDLW----NRMIREGFLPNVVAY 273
            G   +A  +W    N+++R  F+   + Y
Sbjct: 815 QGMPEKAL-IWGQKLNKLLRADFIGYWLVY 843


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 287/602 (47%), Gaps = 47/602 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+  G   +   +  +I+   + G   +AL+++ R+   GLKP++K Y+ ++ AL 
Sbjct: 179 VLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALG 238

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    M+  +   M+  G+ PNV+T+ I ++ L +  ++D AY++   M ++GC PD V
Sbjct: 239 KKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLV 298

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIE--EAFWLLC 189
           +YT ++ ++C  GQ+E A+EL ++  +        +Y  L++       ++  + FW   
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW--S 356

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M   G  P+V+T++ ++  LC   + + +      M  +G  PN+H++ +L+ G L  G
Sbjct: 357 QMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG 416

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A  L   M   G  P    Y+  I     +G   +AV    +M+     PN+   +
Sbjct: 417 RIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACN 476

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           A +   A+ G L  A  ++N +  NG +P+ V Y  M+K   +     +A +L+ +M   
Sbjct: 477 ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            C P+ +  N+ I  L   GRVD A ++ D+MK  +  P + TYN LL GL +  RV++A
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   + +     N +++NT+L   C+   V  A ++  KM +   K D +T+N +IY 
Sbjct: 597 IELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG------------------ 531
             K+ KVN+A     +++     +PD ++  +LL G+   G                   
Sbjct: 657 LIKENKVNHAFWFFHQLKKS--MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 532 ------------------MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
                             M +A I+ ++++  GIC   +    LVR L  +   L    I
Sbjct: 715 VNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQI 774

Query: 574 LD 575
            D
Sbjct: 775 FD 776



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 157/638 (24%), Positives = 284/638 (44%), Gaps = 81/638 (12%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             I+    LL  M+  GV  +   +   I+ + + G   +A++ F +++  G+ P +   N
Sbjct: 417  RIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACN 476

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
              L +L    R      +++ ++ +G+ P+  TYN+++K   K  +VD A  LL EM   
Sbjct: 477  ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
            GC PD +   +++ S+ K G+V+EA     R   M+    V  YN L++GL KE ++++A
Sbjct: 537  GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI--------- 235
              L   M+++   PN I+++T++   C    VE +L +  +M V  C P++         
Sbjct: 597  IELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 236  --------HSF-----------------TSLLKGYLLGGRTHEA-SDLWNRMIREGFLPN 269
                    H+F                  +LL G +  G+  +A S   + M +  F  N
Sbjct: 657  LIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716

Query: 270  VVAYSTLIHGLCSNGSMDEAVSVSYQM------EENS----------------------- 300
               +  L+ G      MD+A+  + ++       E+S                       
Sbjct: 717  RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFD 776

Query: 301  -------CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
                     P + +Y+ LI    +      A  ++  M + GC+P+   +  ++ V  ++
Sbjct: 777  KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836

Query: 354  NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                +   L ++M    C P+ +T+N  I  L     +D A+     +   +  P   TY
Sbjct: 837  GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 414  NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
              L+DGL +V R++EA  L  E+   G + N   +N +++G  + G    A QL  +M+ 
Sbjct: 897  GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956

Query: 474  EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            EG + D  ++ I++   C  G+V+ A+   + ++  G  +PD I+Y  ++ G+  S  M+
Sbjct: 957  EGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG-LDPDFIAYNRIINGLGKSQRME 1015

Query: 534  EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
            EA     +M N GI P+  T+N    SL  NLG  G V
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYN----SLMLNLGLAGMV 1049



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 259/529 (48%), Gaps = 44/529 (8%)

Query: 48  QALKMFYRIREFGLKPTV----KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           +AL  FY I EF   PTV    +  N +L+ L   ++   +  ++  M++  +  ++ TY
Sbjct: 104 RALSYFYSISEF---PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTY 160

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
             + KAL     + G  + +               TT+++ + K G V  A         
Sbjct: 161 LTIFKALS----IRGGLRQM---------------TTVLNKMRKAGFVLNAYS------- 194

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               YN LI+ L +     EA  +   MV  G+ P++ TYS ++ +L    + E  + +L
Sbjct: 195 ----YNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  PN+++FT  ++     G+  EA +++ RM  EG  P++V Y+ LI  LC+ 
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++ A  +  +M+ N   P+   Y  L+D F   G+L    + W++M ++G  P+VV +
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T +V VLC+   F +A +  + M  +   PN  T+NT I GL   GR++ A+KLL  M+ 
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P   TYN  +D   +     +A E   +++  GI  NIV  N  L+ +   G + E
Sbjct: 431 VGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSL 522
           A  +   +   G   D++T+N+++  Y K G+V+ A+ LL + IR G E  PD+I   SL
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE--PDVIVVNSL 548

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           +  +  +G + EA+    +M +  + P   T+N    +L S LG  G V
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYN----TLLSGLGKEGRV 593



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/612 (24%), Positives = 275/612 (44%), Gaps = 46/612 (7%)

Query: 5    LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
            L E   +   + +   ++  G++     +  ++  Y +VG  ++A+ +   +   G +P 
Sbjct: 482  LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541

Query: 65   VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
            V + N ++D+L    R      ++  MK   + P V TYN LL  L K  RV  A +L  
Sbjct: 542  VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601

Query: 125  EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
             M  K C+P+ +S+ T++   CK  +VE A ++      M     V  YN +I GL KE+
Sbjct: 602  SMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKEN 661

Query: 180  KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ-MFVRGCNPNIHSF 238
            K+  AFW   ++  + + P+ +T  T++  L   G +  ++ I    M+      N   +
Sbjct: 662  KVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFW 720

Query: 239  TSLLKGYLLGG-----------------------------------RTHEASDLWNRMIR 263
              L+ G L+                                     R   A  ++++  +
Sbjct: 721  EDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTK 780

Query: 264  E-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
            + G  P + +Y+ LI  L      ++A  +   M+   C P+  T++ L+    K+G + 
Sbjct: 781  KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKIT 840

Query: 323  GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
               +++  MIS  C P+ + Y  ++  L ++N   +A      +   +  P   T+   I
Sbjct: 841  ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900

Query: 383  KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
             GL   GR++ AM+L ++M  Y C PN   +N L++G  ++   + A +L   +   GI+
Sbjct: 901  DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960

Query: 443  LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
             ++ +Y  ++  +C AG V EA     ++   G   D I +N II    K  ++  A+ L
Sbjct: 961  PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020

Query: 503  LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR--S 560
             + +R  G   PD+ +Y SL+  +  +G +++A    +++   G+ P+  T+N L+R  S
Sbjct: 1021 YNEMRNRG-IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYS 1079

Query: 561  LFSNLGHLGPVY 572
            L  N  H   VY
Sbjct: 1080 LSENPEHAYTVY 1091



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/589 (25%), Positives = 259/589 (43%), Gaps = 77/589 (13%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++D    LL +M   G      V  S+I+S  + G  ++A +MF R+++  L PTV  YN
Sbjct: 522  QVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYN 581

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L  L  E R      ++ +M      PN  ++N LL   CKN+ V+ A K+  +M   
Sbjct: 582  TLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVM 641

Query: 130  GCAPDAVSYTTIVS---------------------------SICKL-------GQVEEAR 155
             C PD ++Y T++                            +IC L       GQ+ +A 
Sbjct: 642  DCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 156  ELA------MRFGSGVSVYNAL---------------------INGLCKE---------- 178
             +A      +RF    S +  L                     +NG+C+E          
Sbjct: 702  SIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV 761

Query: 179  ---HKIE-EAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
               HK E  A+ +  +   + GI P + +Y+ +I  L +V   E +  +   M   GC P
Sbjct: 762  LCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAP 821

Query: 234  NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
            +  +F  LL  +   G+  E  +L+  MI     P+ + Y+ +I  L  + ++D+A+   
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 294  YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            Y +  +   P   TY  LIDG AK G L  A +++  M   GC PN   +  ++    + 
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 354  NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                 A  L ++M  E   P+  ++   +  LC  GRVD A+   +++K     P+   Y
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 414  NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            N +++GL +  R++EA  L  E+   GI  ++ TYN+++  +  AGMV +A ++  ++ +
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061

Query: 474  EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
             G + D  T+N +I  Y       +A  +   +   G  NP+I +Y  L
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG-CNPNIGTYAQL 1109


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 270/531 (50%), Gaps = 9/531 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  + D  + L ++M  +G+  ++  +  +I+S+ R G  + A+    ++   G
Sbjct: 372 LINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAG 431

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K TV  YN +++        S     +  M   G++P V +Y  L+   C   ++  A+
Sbjct: 432 IKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAF 491

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           +L  EM  KG AP+  ++TT++S++ +  ++ +A       L          YN +I G 
Sbjct: 492 RLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGH 551

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE    +AF LL +MV +G+ P+  TY  +ISSLC  G V  +   +  +       N 
Sbjct: 552 CKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNE 611

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +++LL GY   GR  +A  +   M++ G   ++V Y+ LI G            +   
Sbjct: 612 MCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKN 671

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+++IDG++KAG++  A  IW+ MI  GC+PN+V YT ++  LC+  +
Sbjct: 672 MHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGL 731

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L ++M   N  PN VT+  F+  L   G ++ A++L + M +   L N  +YN 
Sbjct: 732 MDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNI 790

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  ++ RV+EA +L+ E+    I  + +TY+TI++  CR G +  A +    ML +G
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG 850

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWG 525
            K D + +N +IY  C  G++  A +L D  IR G    P+  ++ SL  G
Sbjct: 851 LKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG--VKPNQATHKSLSHG 899



 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 156/570 (27%), Positives = 273/570 (47%), Gaps = 8/570 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ +M   G   +E    S++   RR G    A  +  R+++ G  P++ +YN ++++L 
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +F     ++  M   G+  N  TY+IL+ + C+  ++D A   L +M   G      
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y ++++  CKLG +  A       +       V  Y +LI+G C + K+ EAF L  EM
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +GI PN  T++T+IS+L     +  +  +  +M  +   PN  ++  +++G+   G T
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L N+M+++G +P+   Y  LI  LCS G + EA      +       N   YSAL
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G+ K G L  A  +   M+  G   ++V Y  ++    +         L++ M  +  
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ V + + I G    G V  A  + D M    C PNI TY  L++ L +   + +A  
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+       N VTY   L  + R G + +A QL   ML +G   + +++NI++  +C
Sbjct: 738 LWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFC 796

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G+V  A +LLD +     + PD I+Y+++++  C  G +  A  +   MLN+G+ P+ 
Sbjct: 797 KLGRVEEATKLLDEMIDNAIF-PDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855

Query: 552 ATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             +N L+       G LG  + L D M  +
Sbjct: 856 LAYNFLIYGC-CIAGELGKAFELRDDMIRR 884



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 162/594 (27%), Positives = 279/594 (46%), Gaps = 58/594 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I +L  +CE      L+ Q++  G          V+N   ++   +  L +F  I   G
Sbjct: 179 LIFRLMRQCE------LMPQVRTLG---------EVLNGLAKIRRVDMVLVLFGEILSMG 223

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P + IY  ++ +      F+    +   M+   +  NV  YN+L+  LCKN RV  A 
Sbjct: 224 IRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAV 281

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKL-------------------------------- 148
           ++   +  KG     V+Y T+V  +CK+                                
Sbjct: 282 EIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGL 341

Query: 149 ---GQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
              G+V +A +L  R         + VYNALIN LCK+ K +EA  L  EM ++G+  N 
Sbjct: 342 RRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAND 401

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TYS +I S C  G ++T++  LG+M + G    ++ + SL+ G+   G    A   ++ 
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           MI +G  P VV+Y++LI G C+ G + EA  + ++M      PN  T++ LI    +A  
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A ++++ M+     PN V Y  M++  C+     +A  L+ +M  +   P+T T+  
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GRV  A K +D + +     N   Y+ LL G  +  R+++A  +  E+ K G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           + +++V Y  ++ G  +       F LL  M  +  + D + +  +I  Y K G V  A 
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            + D +   G   P+I++YT+L+  +C +G M +A +  ++ML     PN  T+
Sbjct: 702 GIWDIMIDEG-CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTY 754



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 249/494 (50%), Gaps = 4/494 (0%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           ++ ++ + + E R      I+  M++  + P V T   +L  L K  RVD    L  E+ 
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG---VSVYNALINGLCKEHKIEEA 184
           + G  PD   Y  ++ S C+L    +A+E+  R  S    V VYN LI+GLCK  ++ EA
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEA 280

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +   ++ +G+  + +TY T++  LC V   E   G++ +M   G  P   + +SL++G
Sbjct: 281 VEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEG 340

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A DL NR+ + G +P++  Y+ LI+ LC +G  DEA  +  +M E     N
Sbjct: 341 LRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAN 400

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TYS LID F + G L  A     +MI  G    V  Y  ++   C+      A S  +
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFD 460

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   P  V++ + I G C  G++  A +L  +M      PN  T+  L+  L R N
Sbjct: 461 EMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRAN 520

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R+ +AF L  E+ +  +  N VTYN ++ G C+ G  V+AF+LL +M+ +G   D  T+ 
Sbjct: 521 RMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYR 580

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I + C  G+V  A + +D +     +  + + Y++LL G C  G +++A    ++M+ 
Sbjct: 581 PLISSLCSTGRVCEAKKFIDDLH-REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVK 639

Query: 545 EGICPNFATWNVLV 558
            G+  +   + VL+
Sbjct: 640 RGVDMDLVCYAVLI 653



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 227/446 (50%), Gaps = 6/446 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
              +M  +G+  +   + S+I+ Y   G   +A ++++ +   G+ P    +  ++ AL 
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALF 517

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             NR +    ++  M    M PN  TYN++++  CK      A++LL +M  KG  PD  
Sbjct: 518 RANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTY 577

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++SS+C  G+V EA++         F      Y+AL++G CKE ++ +A  +  EM
Sbjct: 578 TYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM 637

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V RG+D +++ Y+ +I       +     G+L  M  +   P+   +TS++ GY   G  
Sbjct: 638 VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSV 697

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  +W+ MI EG  PN+V Y+TLI+ LC  G MD+A  +  +M  ++  PN  TY   
Sbjct: 698 KKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCF 757

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +D  A+ G++  A Q+ N M+  G   N V+Y  +V+  C+     +A  L+++M     
Sbjct: 758 LDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAI 816

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ +T++T I   C  G +D A++  D M      P+   YN L+ G      + +AFE
Sbjct: 817 FPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFE 876

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCR 457
           L  ++ + G++ N  T+ ++ HG  R
Sbjct: 877 LRDDMIRRGVKPNQATHKSLSHGASR 902



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 153/362 (42%), Gaps = 73/362 (20%)

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + +  LI        M ++V +   M +    P V T   +++G AK   +     ++  
Sbjct: 159 LGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGE 218

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           ++S G  P++  Y  +++  C+   F +A  +I++M  E+   N V +N  I GLC   R
Sbjct: 219 ILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKR 276

Query: 391 VDWAMKL-----------------------------------LDQMKQYECLPNITTYNE 415
           V  A+++                                   +D+M +   +P     + 
Sbjct: 277 VWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSS 336

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQ--------------------------------- 442
           L++GL R  +V +AF+LV  ++K G                                   
Sbjct: 337 LVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396

Query: 443 --LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              N VTY+ ++   CR G +  A   LGKM++ G K+    +N +I  +CK G ++ A+
Sbjct: 397 LCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAV 456

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
              D +   G   P ++SYTSL+ G CN G + EAF    +M  +GI PN  T+  L+ +
Sbjct: 457 SFFDEMIDKG-LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISA 515

Query: 561 LF 562
           LF
Sbjct: 516 LF 517



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 8/243 (3%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P   IY  ++D             I+  M  +G  PN+ TY  L+  LCK   +D A 
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV----YNALINGLC 176
            L  EM      P+ V+Y   +  + + G +E+A +L      G+      YN L+ G C
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFC 796

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  ++EEA  LL EM+D  I P+ ITYSTII   C  GN++ ++     M  +G  P+  
Sbjct: 797 KLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTL 856

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  L+ G  + G   +A +L + MIR G  PN   + +L HG     S   ++S    M
Sbjct: 857 AYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG----ASRKFSISTHPVM 912

Query: 297 EEN 299
            EN
Sbjct: 913 PEN 915



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 153/317 (48%), Gaps = 9/317 (2%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           G  CE    +  +  +  E    +E  + ++++ Y + G    AL +   + + G+   +
Sbjct: 590 GRVCE---AKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDL 646

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y  ++D  + E   S +  +  NM    + P+   Y  ++    K   V  A+ +   
Sbjct: 647 VCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDI 706

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHK 180
           M ++GC P+ V+YTT+++ +CK G +++A    +E+ +   +   V Y   ++ L +E  
Sbjct: 707 MIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGS 766

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E+A  L  +M+ +G+  N ++Y+ ++   C +G VE +  +L +M      P+  ++++
Sbjct: 767 MEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST 825

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++      G    A + W+ M+ +G  P+ +AY+ LI+G C  G + +A  +   M    
Sbjct: 826 IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885

Query: 301 CPPNVTTYSALIDGFAK 317
             PN  T+ +L  G ++
Sbjct: 886 VKPNQATHKSLSHGASR 902


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 254/488 (52%), Gaps = 15/488 (3%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSS 144
           ++  + R G+ P+VF+YNILL  LC  NR   A +LL  M + G  C PD VSY+T+++ 
Sbjct: 39  VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97

Query: 145 ICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
             K G +++        L  R    V  YN++I  LCK   +++A  +L  MV  G+ P+
Sbjct: 98  FFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 157

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            +TY++I+   C  G  + ++  L +M   G  P++ ++ SL+      GR  EA  +++
Sbjct: 158 CMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFD 217

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M + G  P +  Y TL+ G  + G++ E   +   M  N   PN   +S L+  +AK  
Sbjct: 218 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQE 277

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A  ++++M   G +PN V Y  ++ +LC++     A    E+M  E   P  + +N
Sbjct: 278 KVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 337

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + I GLC C + + A +L+ +M       N   +N ++D   +  RV E+ +L   + + 
Sbjct: 338 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 397

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++ +I+TY+T++ G C AG + EA +LL  M+  G K D +T++ +I  YCK  ++ +A
Sbjct: 398 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDA 457

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICN---SGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + L   +   G  +PDII+Y  +L G+     +   +E ++ + K    G     +T+N+
Sbjct: 458 LVLFREMESSG-VSPDIITYNIILQGLFQTRRTAAAKELYVGITK---SGRQLELSTYNI 513

Query: 557 LVRSLFSN 564
           ++  L  N
Sbjct: 514 ILHGLCKN 521



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 262/553 (47%), Gaps = 8/553 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL  M  +G  C   V  + +VIN + + G  ++    +  + +  + P V  YN I+ A
Sbjct: 73  LLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAA 132

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           + + M + G+ P+  TYN ++   C + +   A   L +M + G  PD
Sbjct: 133 LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 192

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y +++  +CK G+  EAR++            ++ Y  L+ G   +  + E   LL 
Sbjct: 193 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 252

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  GI PN   +S ++ +      VE ++ +  +M  +G NPN  ++ +++      G
Sbjct: 253 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 312

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A   + +MI EG  P  + Y++LIHGLC+    + A  +  +M +     N   ++
Sbjct: 313 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 372

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           ++ID   K G ++ + ++++ M+  G  P+++ Y+ ++   C      +A  L+  M   
Sbjct: 373 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 432

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT++T I G C   R+  A+ L  +M+     P+I TYN +L GL +  R   A
Sbjct: 433 GMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 492

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL   I K G QL + TYN ILHG+C+  +  +A ++   + +   KL+A TFNI+I A
Sbjct: 493 KELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 552

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             K G+ + A  L       G   P+  +Y  +   I   G ++E       M + G   
Sbjct: 553 LLKVGRNDEAKDLFVAFSSNG-LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTV 611

Query: 550 NFATWNVLVRSLF 562
           +    N +VR L 
Sbjct: 612 DSGMLNFIVRELL 624



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 259/523 (49%), Gaps = 9/523 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME--PNVFTYN 104
           E A  +F  +   G+ P V  YN +L+ L  ENR      +   M  DG +  P+V +Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGS 163
            ++    K   +D  Y    EM ++  +P+ V+Y +I++++CK   V++A E L     S
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 164 GV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           GV      YN++++G C   + +EA   L +M   G++P+V+TY++++  LC  G    +
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             I   M  RG  P I ++ +LL+GY   G   E   L + M+R G  PN   +S L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
                 ++EA+ V  +M +    PN  TY A+I    K+G +  A   + +MI  G SP 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            + Y  ++  LC  N + +A  LI +M       NT+ FN+ I   C  GRV  + KL D
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M +    P+I TY+ L+DG     ++ EA +L+  +   G++ + VTY+T+++G C+  
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + +A  L  +M   G   D IT+NII+    +  +   A +L   I   G    ++ +Y
Sbjct: 453 RMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR-QLELSTY 511

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             +L G+C +    +A    Q +    +     T+N+++ +L 
Sbjct: 512 NIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 554



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 249/547 (45%), Gaps = 13/547 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L  M   GV      + S+++ +   G  ++A+    ++R  G
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  YN ++D L    R +    I+ +M + G++P + TY  LL+       +   +
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 248

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            LL  M   G  P+   ++ +V +  K  +VEEA  +   MR          Y A+I  L
Sbjct: 249 GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++E+A     +M+D G+ P  I Y+++I  LC     E +  ++ +M  RG   N 
Sbjct: 309 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 368

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F S++  +   GR  E+  L++ M+R G  P+++ YSTLI G C  G MDEA  +   
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 428

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+  TYS LI+G+ K   +  A  ++  M S+G SP+++ Y  +++ L Q   
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   +          T+N  + GLC     D A+++   +   +      T+N 
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++D LL+V R  EA +L       G+  N  TY  +   +   G++ E  QL   M   G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608

Query: 476 TKLDAITFNIIIYAYCKQGKVNNA---IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             +D+   N I+    ++G++  A   + ++D      E      S  SL   + + G  
Sbjct: 609 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA-----STASLFIDLLSGGKY 663

Query: 533 QEAFIYL 539
           QE   +L
Sbjct: 664 QEYHRFL 670


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 278/573 (48%), Gaps = 12/573 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + +L  MK  GV  +   +   I  Y R    E+A  ++  +   G+   V   +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  + RFS    ++  M + G  PN  TY  L+ +L K  R      LL EM ++
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-------SGVSVYNALINGLCKEHKIE 182
           G   D V+YT ++  + K G+ +E ++  +RF        +GV+ Y  LI+ LCK H ++
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKD-TLRFALSDNLSPNGVT-YTVLIDALCKAHNVD 396

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +L EM ++ I PNV+T+S++I+     G ++ +      M  RG NPN+ ++ +L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+        A ++++ M+ EG   N     +L++GL  NG ++EA+++      +   
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +   Y+ LIDG  KAG++  A +    ++     P+ V Y   +  LC    F +A S 
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M      P+  T+NT I   C  G    A+KLL +MK     PN+ TYN L+ GL  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              V++A  L+ E+   G   + +T+  +L    ++  +     +   M+  G   D   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N ++   C  G    A  +L+ + G G   PD I++ +L+ G C S  +  AF    +M
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 543 LNEGICPNFATWNVLVRSLFS--NLGHLGPVYI 573
           L++ I PN AT+N L+  L S   +G  G V I
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 250/496 (50%), Gaps = 13/496 (2%)

Query: 72  LDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           L+ALL  + R  ++ P  + ++     P    YNILL AL  +     A  +L EM  +G
Sbjct: 76  LNALLYSHCRLRLLRPAIALLRSS--RPTTVAYNILLAALSDHAH---APAVLAEMCKRG 130

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
              D V+  T+++ +C+ GQV+ A  LA R G G+       +N LI G C+      A 
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADR-GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   M  +G+  +V+ Y+T+++  C  G V+ + G+L  M   G +PN+ ++T  +  Y
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA DL+  M+R G L +VV  S L+ GLC +G   EA ++  +M++    PN 
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY  LID  AKAG       +   M+S G   ++V YT ++  L +     +    +  
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              +N  PN VT+   I  LC    VD A ++L +M++    PN+ T++ +++G ++   
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + +A E    +++ GI  N+VTY T++ G  +      A ++   ML EG K++    + 
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           ++    + GK+  A+ L     G G  + D ++YT+L+ G+  +G M  AF + Q++++ 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSG-LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 546 GICPNFATWNVLVRSL 561
            + P+   +NV +  L
Sbjct: 549 NMLPDAVVYNVFINCL 564



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 266/566 (46%), Gaps = 32/566 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L +M+ + +S +   F SVIN + + GL ++A +    ++E G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  ++D             +Y +M  +G++ N F  + L+  L +N +++ A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +    G + D V+YTT                              LI+GL K   
Sbjct: 505 ALFKDASGSGLSLDHVNYTT------------------------------LIDGLFKAGD 534

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF    E++DR + P+ + Y+  I+ LC +G  + +   L +M   G  P+  ++ +
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT 594

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++  +   G T +A  L + M      PN++ Y+TL+ GL   G++++A  +  +M    
Sbjct: 595 MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  T+  ++   +++  L     I   M++ G   ++  Y  +++VLC + M  +A 
Sbjct: 655 FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++E+M      P+T+TFN  I G C    +D A     QM      PNI T+N LL GL
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             V R+ EA  ++ E+EK G++ N +TY+ +  G  +    VEA +L  +M+ +G     
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+N +I  + K G +  A +L   ++  G  +P   +Y  L+ G        E    L+
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRG-VHPTSCTYDILVSGWSRIRNGTEVKKCLK 893

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLG 566
            M  +G  P+  T + + R+ FS  G
Sbjct: 894 DMKEKGFSPSKGTLSFICRA-FSKPG 918



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 196/422 (46%), Gaps = 11/422 (2%)

Query: 158 AMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           A+RF  +  +  NAL+   C+   +  A  LL     R   P  + Y+ ++++L D  + 
Sbjct: 65  AIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSDHAHA 119

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L +M  RG   +  +  +LL G    G+   A+ L +R      L +V+ ++TL
Sbjct: 120 P---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTL 175

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G    A+SV+ +M     P +V  Y+ L+ GF +AG +  A  + + M   G 
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV  YT  +   C+     +A  L E M       + VT +  + GLC  GR   A  
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  +M +    PN  TY  L+D L +  R KE   L+ E+   G+ +++VTY  ++  + 
Sbjct: 296 LFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G   E    L   L +    + +T+ ++I A CK   V+ A Q+L  +      +P++
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK-SISPNV 414

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
           ++++S++ G    G + +A  Y + M   GI PN  T+  L+   F   G    + +  D
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 577 IM 578
           ++
Sbjct: 475 ML 476



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 40/441 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  +I+    L +     G+S     + ++I+   + G    A K    + +  
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   +YN  ++ L    +F       + M+  G++P+  TYN ++ + C+      A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR------------------------- 155
           KLL EM      P+ ++Y T+V+ +   G VE+A+                         
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 156 -------------ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                        E  M  G  + ++VYN L+  LC      +A  +L EM+  GI P+ 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           IT++ +I   C   +++ +     QM  +  +PNI +F +LL G    GR  EA  +   
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M + G  PN + Y  L  G     +  EA+ +  +M      P V+TY+ALI  F KAG 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A +++  M   G  P    Y  +V    +     +    ++ M  +   P+  T + 
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 381 FIKGLCGCGRVDWAMKLLDQM 401
             +     G    A +LL  +
Sbjct: 910 ICRAFSKPGMTWQAQRLLKNL 930



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 116/293 (39%), Gaps = 40/293 (13%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  +YLL +M   G S S      V+ +  +    +  L +   +   GL   + +YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L           +   M   G+ P+  T+N L+   CK++ +D A+    +M ++ 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-------------------------------AM 159
            +P+  ++ T++  +  +G++ EA  +                               AM
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 160 R---------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           R         F   VS YNALI+   K   + +A  L  +M  RG+ P   TY  ++S  
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
             + N       L  M  +G +P+  + + + + +   G T +A  L   + R
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 256/503 (50%), Gaps = 17/503 (3%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G   NV T+  L+  LC+  RV  A  L+  M  +G  PDAV+Y TIV+ +CKLG 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 151 VEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
              A  +  +       + V +Y+A+++ LCK+    +A  +  EM ++GI PNV+TY+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C  G    +  +L  M  R  +P++ +F++L+  ++  G+   A +L+  M+R  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID-----------G 314
             P  + YS++I G C +  +++A  +   M    C P++ T + LID           G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           F + GN+  A  ++  MISNG SP++V    ++  LC+N    +A  + +         +
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD 300

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T T N  I G+C   +VD A  L + +       ++ TYN L+   ++      A ++  
Sbjct: 301 TATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYL 360

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+   GI  + VTYN+++ G C+   + EA Q++  M+ EG   D +TF+ +I  YCK G
Sbjct: 361 EMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAG 420

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           +V++ ++L   +   G    D I+Y +L+ G C  G +  A    ++M++ G+CP+  T+
Sbjct: 421 RVDDGLELFSEMCQRG-LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITF 479

Query: 555 NVLVRSLFSNLGHLGPVYILDDI 577
             ++  L +       + +L+D+
Sbjct: 480 RSMLAGLCTKAELQKGLTMLEDL 502



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 233/469 (49%), Gaps = 18/469 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  EG       + +++N   ++G    AL M  ++ E  +K  V IY+ I+D L 
Sbjct: 32  LVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSAIVDRLC 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        I++ M   G+ PNV TYN ++   C   +   A +LL +M  +   PD V
Sbjct: 92  KDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVV 151

Query: 137 SYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           +++ ++++  K G+V  A EL         F + ++ Y+++I+G CK  ++E+A  +   
Sbjct: 152 TFSALINAFVKEGKVSGAEELYREMLRRNIFPTTIT-YSSMIDGFCKHSRLEDAKHMFDL 210

Query: 191 MVDRGIDPNVITYSTIISS-----------LCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           MV +G  P++IT +T+I              C VGNV  +  +  +M   G +P+I +  
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +LL G    G+  +A +++    +     +    + +I+G+C    +DEA  +   +  N
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVN 330

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
               +V TY+ LI  F K GN L A  I+  M+  G  P+ V Y  MV   C+ N   +A
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             +++ M  E C P+ VTF+T IKG C  GRVD  ++L  +M Q   + +  TYN L+ G
Sbjct: 391 RQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHG 450

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
             +V  +  A ++  E+   G+  + +T+ ++L G+C    + +   +L
Sbjct: 451 FCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 195/405 (48%), Gaps = 16/405 (3%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q +  +M  +G+  +   +  +I+ Y   G    A ++   + E  + P V  ++ +++A
Sbjct: 100 QNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINA 159

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
            + E + S    +Y  M R  + P   TY+ ++   CK++R++ A  +   M +KGC+PD
Sbjct: 160 FVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPD 219

Query: 135 AVSYTTIVSS-----------ICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKE 178
            ++  T++              C++G V  A++L     S GVS      N L+ GLC+ 
Sbjct: 220 IITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCEN 279

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            K+E+A  +        +D +  T + II+ +C    V+ +  +   + V G   ++ ++
Sbjct: 280 GKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTY 339

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             L+  ++  G    A D++  M+ +G +P+ V Y++++ G C    ++EA  +   M  
Sbjct: 340 NILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVS 399

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
             C P+V T+S LI G+ KAG +    ++++ M   G   + + Y  ++   C+    + 
Sbjct: 400 EGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNG 459

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           A  + E+M      P+T+TF + + GLC    +   + +L+ +++
Sbjct: 460 AQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 136/277 (49%), Gaps = 13/277 (4%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+ + +VG    A  +F  +   G+ P +   N +L  L    +      ++   ++  
Sbjct: 237 LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSK 296

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           M+ +  T NI++  +CK N+VD A+ L   +   G   D V+Y  ++    K G    A 
Sbjct: 297 MDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAE 356

Query: 156 ELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           ++ +             YN++++G CK++++EEA  ++  MV  G  P+V+T+ST+I   
Sbjct: 357 DIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGY 416

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G V+  L +  +M  RG   +  ++ +L+ G+   G  + A D++  M+  G  P+ 
Sbjct: 417 CKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDT 476

Query: 271 VAYSTLIHGLCSNGSMDEAV--------SVSYQMEEN 299
           + + +++ GLC+   + + +        SV +++E++
Sbjct: 477 ITFRSMLAGLCTKAELQKGLTMLEDLQKSVDHELEDD 513



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 93/193 (48%), Gaps = 6/193 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L   + V GV      +  +I  + + G   +A  ++  +   G+ P+   YN
Sbjct: 316 KVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYN 375

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D    +NR      +  +M  +G  P+V T++ L+K  CK  RVD   +L  EM  +
Sbjct: 376 SMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQR 435

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEA 184
           G   D ++Y  ++   CK+G +  A+++      SGV      + +++ GLC + ++++ 
Sbjct: 436 GLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKG 495

Query: 185 FWLLCEMVDRGID 197
             +L E + + +D
Sbjct: 496 LTML-EDLQKSVD 507


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 250/524 (47%), Gaps = 6/524 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF  + + +  +GL E+A + F R+R F   P  +  N +L  L       ++   +++
Sbjct: 161 GVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 220

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P+VFTYN+++  LCK   ++ + +L V+M   G +PD V+Y +++    K+G 
Sbjct: 221 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 280

Query: 151 VEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +EE   L            +  YN LIN  CK  K+  AF    EM + G+ PNV+TYST
Sbjct: 281 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I + C  G ++ ++ +L  M   G  PN  ++TSL+      G   EA  L N M++ G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              N+V Y+ L+ GLC  G M EA  V   M ++   PN   Y+AL+ G+ KA  +  A 
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +I  +M      P+++ Y  ++   C      +   ++E+M       N V   T I   
Sbjct: 461 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 520

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+   A+    +M+       I TY  L+DGL     V+ A +    +   G+Q N+
Sbjct: 521 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNV 580

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             Y +++ G+C    +  A +L  +M   G   D   F  +I    K G +  A+ L+ R
Sbjct: 581 AVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISR 640

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           +        D+  YTSL+ G    G + +A  +  +M+ +GI P
Sbjct: 641 MTELA-IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 683



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 244/494 (49%), Gaps = 5/494 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V+     M   G++ S   +  +I+   + G  E + ++F ++RE GL P V  YN ++D
Sbjct: 214 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 273

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                     +  +++ MK  G  P++ TYN L+   CK  ++  A++   EM N G  P
Sbjct: 274 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 333

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS---VYNALINGLCKEHKIEEAFWLL 188
           + V+Y+T++ + CK G ++ A +L   MR    +     Y +LI+  CK   + EA+ LL
Sbjct: 334 NVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 393

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+  G+  N++TY+ ++  LC  G +  +  +   M   G +PN   +T+L+ GY+  
Sbjct: 394 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKA 453

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  +A  +  +M      P+++ Y ++I G CS   ++E   +  +M+      N    
Sbjct: 454 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 513

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + +ID + KAG    A   +  M   G    +V Y  ++  LC+  +   A     +M  
Sbjct: 514 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               PN   + + I GLC    ++ A KL D+M+     P+IT +  L+DG L+   ++E
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  L++ + +  I+ ++  Y +++ G  + G + +A +   +M+ +G   + +    ++ 
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693

Query: 489 AYCKQGKVNNAIQL 502
            Y K+G+++ AI+L
Sbjct: 694 EYYKRGQLDEAIEL 707



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 215/439 (48%), Gaps = 6/439 (1%)

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LINGLCKEHKIEEAF 185
           C   +  +  + S   +LG +EEA E   R  +  ++  A     L++ L K    +   
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +M+  GI P+V TY+ +I  LC  G++E S  +  QM   G +P++ ++ SL+ GY
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   E + L+N M   G +P+++ Y+ LI+  C    M  A     +M+ N   PNV
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS LID F K G + GA ++   M   G  PN   YT ++   C+     +A  L+  
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M       N VT+   + GLC  GR+  A ++   M +    PN   Y  L+ G ++  R
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +++A +++ ++ +C I+ +++ Y +I+ G C    + E   +L +M   G   + +    
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           II AY K GK ++A+     ++  G     I++Y  L+ G+C +G ++ A  Y  +ML+ 
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGV-EATIVTYCVLIDGLCEAGIVELAVDYFCRMLSL 574

Query: 546 GICPNFATWNVLVRSLFSN 564
           G+ PN A +  L+  L  N
Sbjct: 575 GLQPNVAVYTSLIDGLCXN 593



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 230/476 (48%), Gaps = 5/476 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L ++ +++  + L  QM+  G+S     + S+I+ Y +VG  E+   +F  +++ G
Sbjct: 236 MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVG 295

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN +++      +       +S MK +G++PNV TY+ L+ A CK   + GA 
Sbjct: 296 CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAI 355

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGL 175
           KLL +M   G  P+  +YT+++ + CK G + EA +L    ++ G  +++  Y AL++GL
Sbjct: 356 KLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++ EA  +   M+  GI PN   Y+ ++        +E ++ IL QM      P++
Sbjct: 416 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 475

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + S++ G+    +  E   +   M   G   N V  +T+I      G   +A++   +
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 535

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++      + TY  LIDG  +AG +  A   + RM+S G  PNV  YT ++  LC NN 
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M      P+   F   I G    G +  A+ L+ +M +     ++  Y  
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           L+ G  +   + +A +   E+ + GI    V    +L    + G + EA +L  +M
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 227/506 (44%), Gaps = 42/506 (8%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF- 161
           +++L     +   ++ A +    M N    P A S   ++  + K G  +  R+      
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           G+G++     YN +I+ LCKE  +E +  L  +M + G+ P+V+TY+++I     VG++E
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
               +  +M   GC P+I ++  L+  Y    +   A + ++ M   G  PNVV YSTLI
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C  G M  A+ +   M      PN  TY++LID   KAGNL  A ++ N M+  G  
Sbjct: 343 DAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVK 402

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            N+V YT ++  LC+     +A  +   M  +   PN   +   + G     R++ AMK+
Sbjct: 403 LNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI 462

Query: 398 LDQMKQYECLPNITTY-----------------------------------NELLDGLLR 422
           L QM +    P++  Y                                     ++D   +
Sbjct: 463 LKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFK 522

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             +  +A     E++  G++  IVTY  ++ G+C AG+V  A     +ML  G + +   
Sbjct: 523 AGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAV 582

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  +I   C    + +A +L D ++  G   PDI ++T+L+ G    G +QEA + + +M
Sbjct: 583 YTSLIDGLCXNNCIESAKKLFDEMQCRG-MTPDITAFTALIDGNLKHGNLQEALVLISRM 641

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
               I  +   +  LV S FS  G L
Sbjct: 642 TELAIEFDLHVYTSLV-SGFSQCGEL 666



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 215/443 (48%), Gaps = 5/443 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+   ++ V  L  +MK  G       +  +IN Y +     +A + F  ++  G
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y+ ++DA   E        +  +M+R G+ PN FTY  L+ A CK   +  A+
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
           KLL +M   G   + V+YT ++  +CK G++ EA E+       G+S    VY AL++G 
Sbjct: 391 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 450

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++E+A  +L +M +  I P++I Y +II   C    +E +  IL +M  RG + N 
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
              T+++  Y   G++ +A + +  M   G    +V Y  LI GLC  G ++ AV    +
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCR 570

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PNV  Y++LIDG      +  A ++++ M   G +P++ A+T ++    ++  
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  LI +M       +   + + + G   CG +  A K  ++M +   LP       
Sbjct: 631 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 690

Query: 416 LLDGLLRVNRVKEAFELVTEIEK 438
           LL    +  ++ EA EL  E+E+
Sbjct: 691 LLREYYKRGQLDEAIELKNEMER 713



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 30/257 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +L++MK  G+S +  +  ++I++Y + G +  AL  F  +++ G++ T+  Y 
Sbjct: 490 KLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYC 549

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L       +    +  M   G++PNV  Y  L+  LC NN ++ A KL  EM  +
Sbjct: 550 VLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR 609

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  PD  ++T                              ALI+G  K   ++EA  L+ 
Sbjct: 610 GMTPDITAFT------------------------------ALIDGNLKHGNLQEALVLIS 639

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M +  I+ ++  Y++++S     G +  +     +M  +G  P       LL+ Y   G
Sbjct: 640 RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 699

Query: 250 RTHEASDLWNRMIREGF 266
           +  EA +L N M R  +
Sbjct: 700 QLDEAIELKNEMERMAY 716



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 1/207 (0%)

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C   +  F+         G ++ A +   +M+ +  LP   + N LL  L +    +   
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +   ++   GI  ++ TYN ++  +C+ G +  + +L  +M   G   D +T+N +I  Y
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K G +     L + ++  G   PDII+Y  L+   C    M  AF Y  +M N G+ PN
Sbjct: 276 GKVGSLEEVASLFNEMKDVG-CVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDI 577
             T++ L+ +        G + +L D+
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDM 361


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 260/528 (49%), Gaps = 35/528 (6%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRDGM 96
           +S+R +   + AL  F  +      P +  +N +L A++   ++   +  +   M+  G+
Sbjct: 66  SSFRNI---DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            PN  T NIL+   C    VD  + +L ++   G  P  +++TT                
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTT---------------- 166

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                         LINGLCK  +  +A  L  +MV RG  P+V TY+TII+ LC +G  
Sbjct: 167 --------------LINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGET 212

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             + G++ +M   GC P++ ++++L+         +EA D+++ M  +G  P VV+Y++L
Sbjct: 213 AAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSL 272

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLCS     EA ++  +M   +  P++ T+S LID F K GN+L A  +   M   G 
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV+ Y  ++          +A  L + M    C P+  +++  I G C   R+D A +
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L ++M      PN  +Y  L+    ++ +++EA EL  ++   G   ++ TY+ +L G C
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G + +AF+L   M     K + + + I+I + CK G +N+A +L   +   G   PD+
Sbjct: 453 KQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG-LQPDV 511

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             YT+++ G+C  G + EA    +KM  +G  PN  ++NV++R    +
Sbjct: 512 QIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQH 559



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 238/473 (50%), Gaps = 5/473 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L +QM++ G+S +      +IN +  +   +    +  ++ + GL+PT+  +  +
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L     F+    ++ +M   G +P+V+TY  ++  LCK      A  L+ +MG  GC
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            PD V+Y+T++ S+CK   V EA ++     A      V  Y +LI GLC   + +EA  
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +L EM    I P+++T+S +I   C  GNV  + G+L  M   G  PN+ ++ SL+ GY 
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           L     EA  L++ MI  G  P+V +YS LI+G C    +DEA  +  +M      PN  
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y+ LI  F + G L  A +++  M +NG  P++  Y+ +++  C+     +A  L   M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 PN V +   I  +C  G ++ A KL  ++  +   P++  Y  +++GL +   +
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            EA E   ++E+ G   N  +YN I+ G  +      A QL+G+M  +G   D
Sbjct: 528 DEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 94/192 (48%), Gaps = 5/192 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID  + L  +M  +G++ +   + ++I+++ ++G   +A ++F  +   G  P +  Y+
Sbjct: 386 RIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYS 445

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+    +        ++  M+   ++PN+  Y IL+ ++CK+  ++ A KL  E+   
Sbjct: 446 VLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH 505

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  PD   YTTI++ +CK G ++EA E   +            YN +I G  +      A
Sbjct: 506 GLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRA 565

Query: 185 FWLLCEMVDRGI 196
             L+ EM D+G 
Sbjct: 566 VQLIGEMRDKGF 577


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 269/540 (49%), Gaps = 27/540 (5%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+  F R+      P    +N+IL +L+    +  +  ++   + +G  P++ T NIL+ 
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGS 163
             C    +  A+ +L  +  +G  P+A++  T++  +C  G++++A     + +A  F  
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               Y  LINGLCK  + +    LL ++    + P+V+ Y+TII SLC    +  +  + 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M V+G +PN+ ++ +L+ G+ + G   EA  L N M  +   P+V  ++TLI  L   
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G M  A  V   M +    P+V TY++LIDG+     +  A  ++  M  +G +PNV  Y
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T M+  LC+  M  +A SL E+M ++N  P+ VT+ + I GLC    ++ A+ L  +MK+
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P++ +Y  LLD L +  R++ A E    +   G  LN+ TYN +++G+C+A +  E
Sbjct: 407 QGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGE 466

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEW--------- 512
           A  L  KM  +G   DAITF  II A  ++ + + A ++L  +  RG  E          
Sbjct: 467 AMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAK 526

Query: 513 -----------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                       PD+++Y +L+ G      ++ A      M   G+ PN   + +++  L
Sbjct: 527 IVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGL 586



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 271/534 (50%), Gaps = 34/534 (6%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG+ C+      L  +M V+G+S +   + +++  +  +G  ++A  +   ++   + P 
Sbjct: 219 LGDACD------LYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPD 272

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  +N ++DAL  E +      + + M +  ++P+V TYN L+      N+V  A  +  
Sbjct: 273 VCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY 332

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLCKEH 179
            M   G  P+  +YTT++  +CK   V+EA  L   M++ +    +  Y +LI+GLCK H
Sbjct: 333 SMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNH 392

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            +E A  L  +M ++GI P+V +Y+ ++ +LC  G +E +     ++ V+G + N+ ++ 
Sbjct: 393 HLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYN 452

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM--- 296
            ++ G        EA DL ++M  +G +P+ + + T+I  L      D+A  +  +M   
Sbjct: 453 VMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIAR 512

Query: 297 -------------------EENSC-PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
                                 +C  P+V TY  L+DG+     L  A  ++  M   G 
Sbjct: 513 GLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGV 572

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +PNV  YT M+  LC+     +A SL E+M  +N  PN VT+ + I  LC    ++ A+ 
Sbjct: 573 TPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIA 632

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +MK++   P++ +Y  LLDGL +  R++ A E+   +   G  LN+  Y  +++ +C
Sbjct: 633 LLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELC 692

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +AG+  EA  L  KM  +G   DA+TF+III+A  ++ + + A ++L  +   G
Sbjct: 693 KAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 281/610 (46%), Gaps = 64/610 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  + EI    Y   Q+  +G   ++  + ++IN   + G  +   ++  ++    
Sbjct: 139 LIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHS 198

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V +YN I+ +L           +YS M   G+ PNV TYN L+   C    +  A+
Sbjct: 199 VKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAF 258

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR-ELAMRFG----------------- 162
            LL EM  K   PD  ++ T++ ++ K G+++ A+  LA+                    
Sbjct: 259 SLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318

Query: 163 ------------------SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                             SGV+     Y  +I+GLCKE  ++EA  L  EM  + + P++
Sbjct: 319 FFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDI 378

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY+++I  LC   ++E ++ +  +M  +G  P+++S+T LL     GGR   A + + R
Sbjct: 379 VTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQR 438

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           ++ +G+  NV  Y+ +I+GLC      EA+ +  +ME   C P+  T+  +I    +   
Sbjct: 439 LLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDE 498

Query: 321 LLGASQIWNRMISNGC-----------------------SPNVVAYTCMVKVLCQNNMFH 357
              A +I   MI+ G                         P+VV Y  ++      N   
Sbjct: 499 NDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELK 558

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  +   MA     PN   +   I GLC    VD AM L ++MK     PNI TY  L+
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLI 618

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L + + ++ A  L+ E+++ GIQ ++ +Y  +L G+C++G +  A ++  ++L++G  
Sbjct: 619 DALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYH 678

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           L+   +  +I   CK G  + A+ L  ++   G   PD +++  ++W +       +A  
Sbjct: 679 LNVQVYTAMINELCKAGLFDEALDLQXKMEDKG-CMPDAVTFDIIIWALFEKDENDKAEK 737

Query: 538 YLQKMLNEGI 547
            L +M+  G+
Sbjct: 738 ILXEMIARGL 747



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 17/268 (6%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L EK E D  + +L++M   G           +   R+V L E  + +   + +  +KP 
Sbjct: 493 LFEKDENDKAEKILREMIARG-----------LQEARKVRLKEAKI-VLAVMTKACIKPD 540

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  Y  ++D     N       ++ +M + G+ PNV  Y I++  LCK   VD A  L  
Sbjct: 541 VVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFE 600

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
           EM +K   P+ V+YT+++ ++CK   +E A  L            V  Y  L++GLCK  
Sbjct: 601 EMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSG 660

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++E A  +   ++ +G   NV  Y+ +I+ LC  G  + +L +  +M  +GC P+  +F 
Sbjct: 661 RLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFD 720

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFL 267
            ++          +A  +   MI  G +
Sbjct: 721 IIIWALFEKDENDKAEKILXEMIARGLM 748


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 136/505 (26%), Positives = 264/505 (52%), Gaps = 26/505 (5%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A  +F R+      P    +N IL +L+    +  +  +   M+ +G+ P +F +    
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ--- 115

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFG 162
                       ++L+      G  P+ +++TT++  +C  GQ+ +A       +AM F 
Sbjct: 116 ----------HPHQLM------GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                Y  LI+GLCK  +   A  LL  +    + PNV+ YSTII  +C   +V  +  +
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M  +G +PN+ ++++L+ G+   G+  +A DL+N+MI E   P+V  ++ L+ G C 
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           +G M E  +V   M +    PNV TY +L+DG+     +  A  I   M   G +P++ +
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+     +A +L ++M  ++  P+ VT+N+ I GLC  G++ +A+KL+D+M 
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 399

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                P+I TY+ +LD L + ++V +A  L+T+++  GI+ N+ TY  ++ G+C+ G + 
Sbjct: 400 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLE 459

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A  +   +L++G  +   T+ ++I+ +C +G  + A+ LL +++      PD ++Y  +
Sbjct: 460 DAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNS-CIPDAVTYEII 518

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGI 547
           +  + +     +A   L++M+  G+
Sbjct: 519 IRSLFDKDENDKA-EKLREMITRGL 542



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 237/486 (48%), Gaps = 22/486 (4%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           N   Y+ +      NN V  A+ L   +  +   P A+ +  I+ S+ K         L+
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 159 ---------------------MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
                                M +      +  LI GLC + +I +A      +V  G  
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            + + Y T+I  LC VG    +L +L ++      PN+  +++++ G       ++A DL
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           ++ M+ +G  PNVV YS LI G  + G + +A+ +  +M   +  P+V T++ L+DGF K
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G +     ++  M+  G  PNVV Y  ++   C     ++A S++  M+     P+  +
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  I G C   +VD AM L  +M     +P++ TYN L+DGL ++ ++  A +LV E+ 
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 399

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             G+  +I+TY++IL  +C+   V +A  LL K+  +G + +  T+ I+I   CK G++ 
Sbjct: 400 DRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLE 459

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A  + + +   G +N  + +YT ++ G CN G   EA   L KM +    P+  T+ ++
Sbjct: 460 DAHNIFEDLLVKG-YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518

Query: 558 VRSLFS 563
           +RSLF 
Sbjct: 519 IRSLFD 524



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 179/325 (55%), Gaps = 8/325 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+S +   + ++I+ +  VG  + A+ +F ++    +KP V  +N ++D   
Sbjct: 219 LYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFC 278

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      +++ M + G++PNV TY  L+   C    V+ A  +L  M  +G  PD  
Sbjct: 279 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQ 338

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  ++   CK+ +V+EA  L            V  YN+LI+GLCK  KI  A  L+ EM
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            DRG+ P++ITYS+I+ +LC    V+ ++ +L ++  +G  PN++++T L+ G   GGR 
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRL 458

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +++  ++ +G+   V  Y+ +IHG C+ G  DEA+++  +M++NSC P+  TY  +
Sbjct: 459 EDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEII 518

Query: 312 IDG-FAKAGNLLGASQIWNRMISNG 335
           I   F K  N    ++    MI+ G
Sbjct: 519 IRSLFDKDEN--DKAEKLREMITRG 541



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 191/404 (47%), Gaps = 34/404 (8%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y+++       + + +AF L   ++ +   P  I ++ I+ SL    +  T L +  QM 
Sbjct: 44  YSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQME 103

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G NP +  F             H+           G+ PN + ++TLI GLC  G + 
Sbjct: 104 FEGINPVLFHFQ----------HPHQLM---------GYHPNTITFTTLIKGLCLKGQIH 144

Query: 288 EA-------VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           +A       V++ +Q+++         Y  LI G  K G    A  +  R+  N   PNV
Sbjct: 145 QALLFHDNVVAMGFQLDQ-------VGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNV 197

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y+ ++  +C++   + A  L  +M  +   PN VT++  I G    G++  A+ L ++
Sbjct: 198 VMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNK 257

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M      P++ T+N L+DG  +  ++KE   +   + K GI+ N+VTY +++ G C    
Sbjct: 258 MILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKE 317

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V +A  +L  M   G   D  ++NI+I  +CK  KV+ A+ L   +       PD+++Y 
Sbjct: 318 VNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK-HIIPDVVTYN 376

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           SL+ G+C  G +  A   + +M + G+ P+  T++ ++ +L  N
Sbjct: 377 SLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 420



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 6/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + +L  M   GV+     +  +I+ + ++   ++A+ +F  +    + P V  YN
Sbjct: 317 EVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYN 376

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    + S    +   M   G+ P++ TY+ +L ALCKN++VD A  LL ++ ++
Sbjct: 377 SLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 436

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+  +YT ++  +CK G++E+A       L   +   V+ Y  +I+G C +   +EA
Sbjct: 437 GIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEA 496

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             LL +M D    P+ +TY  II SL D    + +   L +M  RG
Sbjct: 497 LALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK-LREMITRG 541



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 15/135 (11%)

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           ++N + Y++I         VV+AF L  ++L +     AI FN I+ +  K    +  + 
Sbjct: 38  KINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLS 97

Query: 502 LLDRIRGGG---------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           L  ++   G                ++P+ I++T+L+ G+C  G + +A ++   ++  G
Sbjct: 98  LSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMG 157

Query: 547 ICPNFATWNVLVRSL 561
              +   +  L+  L
Sbjct: 158 FQLDQVGYGTLIHGL 172



 Score = 38.5 bits (88), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++D    LL ++K +G+  +   +  +I+   + G  E A  +F  +   G
Sbjct: 413 ILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              TV  Y  ++     +  F     + S MK +   P+  TY I++++L   +  D A 
Sbjct: 473 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAE 532

Query: 121 KLLVEMGNKG 130
           KL  EM  +G
Sbjct: 533 KLR-EMITRG 541


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 280/598 (46%), Gaps = 59/598 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   MK +G S +   F  +I+   + G    A  +F  + + G+ P+V  YN ++    
Sbjct: 160 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 219

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R +    I   M+++G  P+ +TYN L+  LC + + + A +LL     +G  P  V
Sbjct: 220 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 278

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++T +++  C   + ++A  +  +  S      + V+  LIN L K+ +++EA  LL E+
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PNVITY++II   C  G V+ +L +L  M   GC PN  ++ SL+ G +   + 
Sbjct: 339 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 398

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H+A  L  +M ++G +PNV+ Y+TL+ G C     D A  +   ME+N   P+   Y+ L
Sbjct: 399 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 458

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            D   KAG    A + ++ ++  G +   V YT ++    +      A +LIE+M  E C
Sbjct: 459 TDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC 515

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P++ T++  +  LC   R++ A+ +LDQM        I  Y  L+D +LR  +   A  
Sbjct: 516 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 575

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  E+   G + +  TY   ++  C+ G + +A  L+ KM  EG   D +T+NI+I    
Sbjct: 576 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 635

Query: 492 KQGKVNNAIQLLDRIRGG------------------------------GEWN-------- 513
             G ++ A   L R+ G                               G WN        
Sbjct: 636 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITW 695

Query: 514 ------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
                       P + +Y+SL+ G C +G ++EA + L  M  +G+ PN   + +L++
Sbjct: 696 QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 753



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/649 (25%), Positives = 285/649 (43%), Gaps = 130/649 (20%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V    I + RR G A  AL             + K YN  L +L   +    +  +YS +
Sbjct: 13  VSADAIQAIRRTGSARLAL-------------SPKCYNFALRSLARFDMTEYMGRVYSQL 59

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGA---YKLLVEMGNK------------------- 129
            +DG+ P+  TYN ++K+ CK   +  A   ++LL+E G +                   
Sbjct: 60  VQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGEL 119

Query: 130 -------------GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNAL 171
                        GC  +  SYT ++  +C    V +A  L +          V  +  L
Sbjct: 120 RKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFL 179

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+GLCK  ++ +A  L   M   G+ P+V+TY+ +I     +G +  +L I   M   GC
Sbjct: 180 ISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGC 239

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +P+  ++ +L+ G L   +T EA +L N  ++EGF P VV ++ LI+G C     D+A+ 
Sbjct: 240 HPDDWTYNTLIYG-LCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALR 298

Query: 292 VSYQMEENSCP-----------------------------------PNVTTYSALIDGFA 316
           +  +M  + C                                    PNV TY+++IDG+ 
Sbjct: 299 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 358

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K+G +  A ++   M  +GC PN   Y  ++  L ++   H+A +L+ KM  +   PN +
Sbjct: 359 KSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVI 418

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ T ++G C     D A +L + M+Q    P+   Y  L D L +  R +EA+  +   
Sbjct: 419 TYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV-- 476

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            + G+ L  V Y T++ G  +AG    A  L+ +M+ EG   D+ T++++++A CKQ ++
Sbjct: 477 -RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRL 535

Query: 497 NNAIQLLDR--IRG--------------------------------GGEWNPDIISYTSL 522
           N A+ +LD+  +RG                                     P   +YT  
Sbjct: 536 NEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVF 595

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           +   C  G +++A   + KM  EG+ P+  T+N+L+       GH+G +
Sbjct: 596 INSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI----DGCGHMGYI 640



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 239/521 (45%), Gaps = 18/521 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   + LL ++   G+  +   + S+I+ Y + G  + AL++   +   G
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN ++  L+ + +      + + M++DG+ PNV TY  LL+  C  +  D A+
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKE 178
           +L   M   G  PD  +Y  +  ++CK G+ EEA    +R G  ++   Y  LI+G  K 
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 497

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              + A  L+  M+D G  P+  TYS ++ +LC    +  +L IL QM +RG    I ++
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T L+   L  G+   A  ++N M   G  P+   Y+  I+  C  G +++A  +  +ME 
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 617

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+V TY+ LIDG    G +  A     RM+   C PN   Y  ++K L + N+ + 
Sbjct: 618 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 677

Query: 359 AH----------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
                              L+E+M      P   T+++ I G C  GR++ A  LLD M 
Sbjct: 678 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 737

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                PN   Y  L+         ++A   V+ + +CG Q  + +Y  ++ G+C  G   
Sbjct: 738 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFE 797

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   L   +L  G   D + + I+     K G V+   Q+L
Sbjct: 798 KVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 838



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 259/569 (45%), Gaps = 25/569 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + +  + LL     EG + +   F ++IN Y      + AL+M  ++     K  ++++ 
Sbjct: 257 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 316

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++++L+ ++R      + + +  +G+ PNV TY  ++   CK+ +VD A ++L  M   
Sbjct: 317 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+A +Y +++  + K  ++ +A  L  +         V  Y  L+ G C EH  + A
Sbjct: 377 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 436

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L   M   G+ P+   Y+ +  +LC  G  E +   + +   +G       +T+L+ G
Sbjct: 437 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDG 493

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G T  A+ L  RMI EG  P+   YS L+H LC    ++EA+ +  QM        
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y+ LID   + G    A +++N M S+G  P+   YT  +   C+      A  LI 
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM  E   P+ VT+N  I G    G +D A   L +M    C PN  TY  LL  LL+ N
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 673

Query: 425 ----------------RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
                            +   ++L+  + K G+   + TY++++ G C+AG + EA  LL
Sbjct: 674 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 733

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G   +   + ++I   C       A+  +  +   G + P + SY  L+ G+CN
Sbjct: 734 DHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECG-FQPQLESYRLLVVGLCN 792

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            G  ++       +L  G   +   W +L
Sbjct: 793 EGDFEKVKSLFCDLLELGYNHDEVAWKIL 821



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 21/314 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L QM + G+ C+   +  +I+   R G  + A +M+  +   G KP+   Y   +++  
Sbjct: 541 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 600

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   M+R+G+ P+V TYNIL+        +D A+  L  M    C P+  
Sbjct: 601 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 660

Query: 137 SYTTIVSSICK----------------LGQVEEARELAMR-----FGSGVSVYNALINGL 175
           +Y  ++  + K                L +++   +L  R         V+ Y++LI G 
Sbjct: 661 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 720

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++EEA  LL  M  +G+ PN   Y+ +I   CD    E +L  +  M   G  P +
Sbjct: 721 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQL 780

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+  L+ G    G   +   L+  ++  G+  + VA+  L  GL   G +D    +   
Sbjct: 781 ESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSI 840

Query: 296 MEENSCPPNVTTYS 309
           ME+  C  +  TY+
Sbjct: 841 MEKRYCCISSQTYA 854


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 265/511 (51%), Gaps = 10/511 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PTV  YN ++D     +R ++   ++    + G++ +V   NILLK LC   R D A  +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 123 LV-EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSG-----VSVYNALING 174
           L+  M   G  PD +SY+T++ S+C+  + + A +L   M   SG     V  YN +I+G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             +E ++ +A  L  EM+ +G+ P+V+TYS+ I +LC    ++ +  +L QM   G  P+
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++  ++ GY + G+  E + ++  M R G +P++   ++ +  LC +G   EA     
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M      P++ TYS L+ G+A  G ++    ++N M  NG   +   Y  ++    +  
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A  +  +M      P+  T+ T I      GR+  AM   +QM      P+   YN
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            L+ G      + +A EL++E+   GI + N V +N+I++ +C+ G VVEA  +   ++ 
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G + D ITFN +I  Y   GK+  A  +LD +   G   PD+++Y++LL G C +G + 
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG-IEPDVVTYSALLDGYCRNGRID 595

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +  I  ++ML++G+ P   T+ +++  LF++
Sbjct: 596 DGLILFREMLSKGVKPTTITYGIILHGLFND 626



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 260/554 (46%), Gaps = 34/554 (6%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI--REFGLKPTVKIYN 69
           D V  LL +M   GV      + +V+ S      +++AL + + +  +  G  P V  YN
Sbjct: 172 DAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYN 231

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E   S    ++  M + G+ P+V TY+  + ALCK   +D A  +L +M + 
Sbjct: 232 TVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN 291

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  PD V+Y  ++     LGQ +E                                 +  
Sbjct: 292 GFEPDKVTYNCMIHGYSILGQWKETA------------------------------GMFR 321

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  RG+ P++ T ++ +SSLC  G  + +      M  +G  P++ +++ LL GY   G
Sbjct: 322 EMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEG 381

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +  +L+N M   G + +   Y+ LI      G MDEA+ +  QM+E    P+  TY 
Sbjct: 382 YVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYG 441

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +I  F++ G L  A   +N+MI+ G  P+ + Y  +++  C +    +A  LI +M   
Sbjct: 442 TVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSR 501

Query: 370 NCP-PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
             P PNTV FN+ I  LC  GRV  A  + D +      P++ T+N L+DG   V ++++
Sbjct: 502 GIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEK 561

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           AF ++  +   GI+ ++VTY+ +L G CR G + +   L  +ML +G K   IT+ II++
Sbjct: 562 AFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILH 621

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
                G+   A ++   +   G    DI +   +L G+C +    EA    +K+    + 
Sbjct: 622 GLFNDGRTVGAKKMCHEMIESG-TTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVK 680

Query: 549 PNFATWNVLVRSLF 562
            N A  N ++ +++
Sbjct: 681 FNIAIINTMIDAMY 694



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 243/475 (51%), Gaps = 6/475 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S ++S  + G +++A + F  +   G KP +  Y+ +L    AE     +  ++++M+ +
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGN 396

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+  +   YNIL+ A  K   +D A  +  +M  +G  PDA +Y T++++  ++G++ +A
Sbjct: 397 GIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADA 456

Query: 155 RE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID-PNVITYSTIIS 208
            +     +AM       VYN+LI G C    + +A  L+ EM+ RGI  PN + +++II+
Sbjct: 457 MDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIIN 516

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           SLC  G V  +  I   +   G  P++ +F SL+ GY L G+  +A  + + MI  G  P
Sbjct: 517 SLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEP 576

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +VV YS L+ G C NG +D+ + +  +M      P   TY  ++ G    G  +GA ++ 
Sbjct: 577 DVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + MI +G + ++     ++  LC+NN   +A +L +K+   N   N    NT I  +   
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            + + A +L D +     +PN +TY  ++  LL+   V+EA  + + +EK G   +    
Sbjct: 697 RKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N I+  +   G + +A   L K+  +   L+A T ++++  + ++GK    I+ L
Sbjct: 757 NNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSL 811



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 274/593 (46%), Gaps = 45/593 (7%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL  M  +   CS  V  + +VI+ + R G   +A  +F+ + + G+ P V  Y+  +DA
Sbjct: 212 LLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDA 271

Query: 75  L---------------LAENRFS--------MINP------------IYSNMKRDGMEPN 99
           L               +  N F         MI+             ++  M R G+ P+
Sbjct: 272 LCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPD 331

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
           +FT N  + +LCK+ +   A +    M  KG  PD V+Y+ ++      G V +   L  
Sbjct: 332 IFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFN 391

Query: 160 RF-GSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              G+G+    SVYN LI+   K   ++EA  +  +M +RG+ P+  TY T+I++   +G
Sbjct: 392 SMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAY 273
            +  ++    QM   G  P+   + SL++G+ + G   +A +L + M+  G   PN V +
Sbjct: 452 RLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFF 511

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +++I+ LC  G + EA  +   +      P+V T+++LIDG+   G +  A  + + MIS
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMIS 571

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  P+VV Y+ ++   C+N        L  +M  +   P T+T+   + GL   GR   
Sbjct: 572 VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVG 631

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A K+  +M +     +I+T   +L GL R N   EA  L  ++    ++ NI   NT++ 
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMID 691

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            + +     EA +L   +   G   +A T+ ++I    K+G V  A  +   +   G   
Sbjct: 692 AMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG-CA 750

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           P      +++  +   G + +A  YL K+  + I    +T ++++ SLFS  G
Sbjct: 751 PSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLML-SLFSRKG 802



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/432 (22%), Positives = 188/432 (43%), Gaps = 37/432 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G++  +D    +  QM+  GV      + +VI ++ R+G    A+  F ++   G
Sbjct: 408 LIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMG 467

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNILLKALCKNNRVDGA 119
           LKP   +YN ++              + S M   G+  PN   +N ++ +LCK  RV  A
Sbjct: 468 LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527

Query: 120 ---YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLC 176
              + L++ +G +   PD ++                              +N+LI+G  
Sbjct: 528 QDIFDLVIHIGER---PDVIT------------------------------FNSLIDGYG 554

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              K+E+AF +L  M+  GI+P+V+TYS ++   C  G ++  L +  +M  +G  P   
Sbjct: 555 LVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTI 614

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  +L G    GRT  A  + + MI  G   ++     ++ GLC N   DEA+++  ++
Sbjct: 615 TYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
              +   N+   + +ID   K      A+++++ + + G  PN   Y  M+  L +    
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSV 734

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A ++   M    C P++   N  I+ L   G +  A   L ++         +T + +
Sbjct: 735 EEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLM 794

Query: 417 LDGLLRVNRVKE 428
           L    R  + +E
Sbjct: 795 LSLFSRKGKYRE 806



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 16/240 (6%)

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL--------CGC 388
           SP     T   +V          H L +++  +  P      N F+  L        C  
Sbjct: 34  SPIAAFATATERVRAGTLSTEDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRD 93

Query: 389 GRVDWAMKLLDQMKQYEC-----LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G    A+ L +++ + E      LP + TYN L+D   R +R    F L     K G++ 
Sbjct: 94  G-PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKT 152

Query: 444 NIVTYNTILHGVCRAGMVVEAFQ-LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +++  N +L  +C A    +A   LL +M   G + D I+++ ++ + C+  +   A+ L
Sbjct: 153 DVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDL 212

Query: 503 LDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L   ++  G  +P+++SY +++ G    G + +A     +M+ +G+ P+  T++  + +L
Sbjct: 213 LHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDAL 272


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 239/452 (52%), Gaps = 8/452 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P+  T   L+K L  + R   A ++L       C PD ++Y  +++  C  GQV+ AR 
Sbjct: 95  RPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCGAGQVDAARR 149

Query: 157 LAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                      Y  + LI GLC   +   A  +L EM+ R   P+V+TY+ ++ + C   
Sbjct: 150 WCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 209

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             + ++ +L +M  +GC P+I ++  ++ G    GR  +A +    +   G  PN V+Y+
Sbjct: 210 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 269

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            ++ GLC+    ++A  +  +M +  CPPNV T++ LI    + G +  A ++  ++   
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 329

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GCSPN ++Y  ++   C+     +A + ++ M    C P+ V++NT +  LC  G VD A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           ++LL Q+K   C P + +YN ++DGL +  + KEA EL+ E+   G+Q +I+TY+TI  G
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +CR   + +A +  GK+   G + + + +N II   CK+ + ++AI L   + G G   P
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG-CMP 508

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +  +YT L+ G+   G ++EA   L ++ + G
Sbjct: 509 NESTYTILIEGLAYEGLIKEARDLLDELCSRG 540



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 229/455 (50%), Gaps = 8/455 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           L++L +   +D A +L+         PDA +   ++  +   G+  EAR +    G  V 
Sbjct: 74  LRSLVRRGELDEALRLV----GSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVM 129

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNA++ G C   +++ A     E   R ++ +  T  T+I  LC  G    +L +L +M
Sbjct: 130 AYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEM 186

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             R C P++ ++T LL+         +A  L + M  +G  P++V Y+ +++G+C  G +
Sbjct: 187 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 246

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+     +    C PN  +Y+ ++ G   A     A ++   M   GC PNVV +  +
Sbjct: 247 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 306

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+  +   A  ++E++    C PN++++N  +   C   ++D AM  LD M    C
Sbjct: 307 ISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 366

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I +YN LL  L R   V  A EL+ +++  G    +++YNT++ G+ +AG   EA +
Sbjct: 367 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 426

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL +M+ +G + D IT++ I    C++ ++ +AI+   +++  G   P+ + Y +++ G+
Sbjct: 427 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG-IRPNTVLYNAIILGL 485

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C       A      M+  G  PN +T+ +L+  L
Sbjct: 486 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/373 (34%), Positives = 200/373 (53%), Gaps = 5/373 (1%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + ++  L    R +    +   M R    P+V TY ILL+A CK +    A KLL EM +
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEE 183
           KGC PD V+Y  +V+ IC+ G+V++A E      S         YN ++ GLC   + E+
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ EM  +G  PNV+T++ +IS LC  G VE +L +L Q+   GC+PN  S+  LL 
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            +    +  +A    + M+  G  P++V+Y+TL+  LC +G +D AV + +Q+++  C P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            + +Y+ +IDG  KAG    A ++ N M+S G  P+++ Y+ +   LC+ +    A    
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            K+      PNTV +N  I GLC       A+ L   M    C+PN +TY  L++GL   
Sbjct: 464 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE 523

Query: 424 NRVKEAFELVTEI 436
             +KEA +L+ E+
Sbjct: 524 GLIKEARDLLDEL 536



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 231/480 (48%), Gaps = 17/480 (3%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           + S  R G  ++AL++    R    +P       ++  L A  R +    + +       
Sbjct: 74  LRSLVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRVLA-----AC 124

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-- 154
            P+V  YN ++   C   +VD A +   E   +    DA +  T++  +C  G+   A  
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 155 ---RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                L  R    V  Y  L+   CK    ++A  LL EM D+G  P+++TY+ +++ +C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G V+ ++  L  +   GC PN  S+  +LKG     R  +A +L   M ++G  PNVV
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++ LI  LC  G ++ A+ V  Q+ +  C PN  +Y+ L+  F K   +  A    + M
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +S GC P++V+Y  ++  LC++     A  L+ ++  + C P  +++NT I GL   G+ 
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A++LL++M      P+I TY+ +  GL R +R+++A     +++  GI+ N V YN I
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G+C+      A  L   M+  G   +  T+ I+I     +G +  A  LLD +   GE
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGE 541



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 179/350 (51%), Gaps = 30/350 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G +     +  V+N   + G  + A++    +  +G +P    YN +L  L 
Sbjct: 217 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 276

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+     +   M + G  PNV T+N+L+  LC+   V+ A ++L ++   GC+P+++
Sbjct: 277 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSL 336

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           SY                              N L++  CK+ K+++A   L  MV RG 
Sbjct: 337 SY------------------------------NPLLHAFCKQKKMDKAMAFLDLMVSRGC 366

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P++++Y+T++++LC  G V+ ++ +L Q+  +GC P + S+ +++ G    G+T EA +
Sbjct: 367 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 426

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L N M+ +G  P+++ YST+  GLC    +++A+    ++++    PN   Y+A+I G  
Sbjct: 427 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLC 486

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           K      A  ++  MI NGC PN   YT +++ L    +  +A  L++++
Sbjct: 487 KRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 5/259 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  + L+ +M  +G   +   F  +I+   R GL E AL++  +I ++G  P    YN +
Sbjct: 282 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPL 341

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L A   + +          M   G  P++ +YN LL ALC++  VD A +LL ++ +KGC
Sbjct: 342 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 401

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFW 186
           AP  +SY T++  + K G+ +EA EL     S      +  Y+ +  GLC+E +IE+A  
Sbjct: 402 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
              ++ D GI PN + Y+ II  LC      +++ +   M   GC PN  ++T L++G  
Sbjct: 462 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 521

Query: 247 LGGRTHEASDLWNRMIREG 265
             G   EA DL + +   G
Sbjct: 522 YEGLIKEARDLLDELCSRG 540



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL Q+K +G +     + +VI+   + G  ++AL++   +   GL+P +  Y+
Sbjct: 385 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 444

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I   L  E+R       +  ++  G+ PN   YN ++  LCK      A  L   M   
Sbjct: 445 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 504

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL 157
           GC P+  +YT ++  +   G ++EAR+L
Sbjct: 505 GCMPNESTYTILIEGLAYEGLIKEARDL 532


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 167/603 (27%), Positives = 302/603 (50%), Gaps = 37/603 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL--KPTVKI 67
           EI+ +  L+    ++    S    +SV++ + +    ++A   F  +R      KP + +
Sbjct: 57  EIEELHNLILSSSIQKTKLSS--LLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYL 114

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN +L++ + E R   ++ +Y +M   G+ P  +T+N+L++ALC ++ VD A +L  EM 
Sbjct: 115 YNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMP 174

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GV----SVYNALINGLCKEHKIE 182
            KGC P+  ++  +V   CK G  ++  EL     S GV     VYN +++  C+E + +
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRND 234

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM----FVRGCNPNIHSF 238
           ++  L+ +M + G+ P+++T+++ IS+LC  G V  +  I   M    ++    PN  ++
Sbjct: 235 DSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             +LKG+   G   +A  L+  +     L ++ +Y+  + GL  +G   EA +V  QM +
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMID 354

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P++ +Y+ L+DG  K G L  A  I   M  NG SP+ V Y C++   C       
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDA 414

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A SL+++M   NC PN  T N  +  L   GR+  A +LL +M +     +  T N ++D
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQL-----------------------NIVTYNTILHGV 455
           GL     + +A E+V  +   G                          +++TY+T+L+G+
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+AG   EA  L  +M+ E  + D++ +NI I+ +CKQGK+++A ++L  +   G  +  
Sbjct: 535 CKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKG-CHKS 593

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
           + +Y SL+ G+     + E    + +M  +GI PN  T+N  ++ L           +LD
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLD 653

Query: 576 DIM 578
           ++M
Sbjct: 654 EMM 656



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 266/536 (49%), Gaps = 32/536 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D  + L  +M  +G   +E  F  ++  Y + GL ++ L++   +  FG
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFG 212

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   +YN I+ +   E R      +   M+ +G+ P++ T+N  + ALCK  +V  A 
Sbjct: 213 VLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNAL 171
           ++  +M          P++++Y  ++   CK+G +E+A+ L  ++R       +  YN  
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIW 332

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GL +  K  EA  +L +M+D+GI P++ +Y+ ++  LC +G +  +  I+G M   G 
Sbjct: 333 LQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +P+  ++  LL GY   G+   A  L   M+R   LPN    + L+H L + G + EA  
Sbjct: 393 SPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEE 452

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNL--------------------LGASQIW--- 328
           +  +M E     +  T + ++DG   +G L                    LG S I    
Sbjct: 453 LLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVD 512

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + +I N C P+++ Y+ ++  LC+   F +A +L  +M  E   P+++ +N FI   C  
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQ 572

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G++  A ++L  M++  C  ++ TYN L+ GL   N++ E   L+ E+ + GI  NI TY
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTY 632

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           NT +  +C  G V +A  LL +M+ +    +  +F  +I A+CK    + A ++ +
Sbjct: 633 NTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFE 688



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/499 (25%), Positives = 226/499 (45%), Gaps = 29/499 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++  + +VGL E A  +F  IRE     +++ YN  L  L+   +F     +   M   G
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKG 356

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P++++YNIL+  LCK   +  A  ++  M   G +PDAV+Y  ++   C +G+V+ A+
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAK 416

Query: 156 EL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L    MR     + Y  N L++ L    +I EA  LL +M ++G   + +T + I+  L
Sbjct: 417 SLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL 476

Query: 211 CDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLKGYLL 247
           C  G ++ ++ I+  M V G                       C P++ ++++LL G   
Sbjct: 477 CGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCK 536

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            GR  EA  L+  M+ E   P+ +AY+  IH  C  G +  A  V   ME+  C  ++ T
Sbjct: 537 AGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLET 596

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y++LI G      +     + + M   G SPN+  Y   ++ LC+      A +L+++M 
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMM 656

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +N  PN  +F   I   C     D A ++ +      C      Y+ + + LL   ++ 
Sbjct: 657 QKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSLMFNELLAAGQLL 715

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A EL+  +   G +L    Y  ++  +C+   +  A  +L KM+ +G   D      +I
Sbjct: 716 KATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVI 775

Query: 488 YAYCKQGKVNNAIQLLDRI 506
               K G    A    +++
Sbjct: 776 DGLGKMGNKKEANNFAEKM 794



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 196/446 (43%), Gaps = 33/446 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + +L+QM  +G+  S   +  +++   ++G+   A  +   ++  G+ P    Y  +L 
Sbjct: 345 AETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLH 404

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
              +  +      +   M R+   PN +T NILL +L    R+  A +LL +M  KG   
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGL 464

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV------------------------ 167
           D V+   IV  +C  G++++A E+   MR     ++                        
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524

Query: 168 --YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y+ L+NGLCK  +  EA  L  EM+   + P+ + Y+  I   C  G + ++  +L  
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKD 584

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +GC+ ++ ++ SL+ G  +  +  E   L + M  +G  PN+  Y+T I  LC  G 
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGK 644

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +++A ++  +M + +  PNV ++  LI  F K  +   A +++   +S  C      Y+ 
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI-CGQKEGLYSL 703

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQ 403
           M   L       +A  L+E +        T  +   +  LC    ++ A  +L +M  K 
Sbjct: 704 MFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKG 763

Query: 404 YECLPNITTYNELLDGLLRVNRVKEA 429
           Y   P       ++DGL ++   KEA
Sbjct: 764 YGFDP--AALMPVIDGLGKMGNKKEA 787



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 153/345 (44%), Gaps = 26/345 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    +++ M+V G         ++ NSY  +GL + +L       E    P +  Y+
Sbjct: 481 ELDKAIEIVKGMRVHG----SAALGNLGNSY--IGLVDDSL------IENNCLPDLITYS 528

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+ L    RF+    +++ M  + ++P+   YNI +   CK  ++  A+++L +M  K
Sbjct: 529 TLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEA 184
           GC     +Y +++  +    Q+ E   L   MR       +  YN  I  LC+  K+E+A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDA 648

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM+ + I PNV ++  +I + C V + + +  +  +  V  C      ++ +   
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNE 707

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            L  G+  +A++L   ++  GF      Y  L+  LC    ++ A  + ++M +     +
Sbjct: 708 LLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFD 767

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRM--------ISNGCSPNVV 341
                 +IDG  K GN   A+    +M        ++N   PN  
Sbjct: 768 PAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVANKVDPNAT 812



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 27/268 (10%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           E +GEK + D + Y               +FI   + + + G    A ++   + + G  
Sbjct: 549 EMMGEKLQPDSLAY--------------NIFI---HHFCKQGKISSAFRVLKDMEKKGCH 591

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
            +++ YN ++  L  +N+   I+ +   M+  G+ PN+ TYN  ++ LC+  +V+ A  L
Sbjct: 592 KSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNL 651

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-------YNALINGL 175
           L EM  K  AP+  S+  ++ + CK+   + A+E+   F + VS+       Y+ + N L
Sbjct: 652 LDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEV---FETAVSICGQKEGLYSLMFNEL 708

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               ++ +A  LL  ++DRG +     Y  ++ SLC    +E + GIL +M  +G   + 
Sbjct: 709 LAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDP 768

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            +   ++ G    G   EA++   +M+ 
Sbjct: 769 AALMPVIDGLGKMGNKKEANNFAEKMME 796



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 41/220 (18%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG K +I  +  L+ +M+ +G+S                                 
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMREKGIS--------------------------------- 626

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN  +  L    +      +   M +  + PNVF++  L+ A CK    D A 
Sbjct: 627 --PNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQ 684

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           ++  E     C      Y+ + + +   GQ+ +A E     L   F  G  +Y  L+  L
Sbjct: 685 EVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSL 743

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           CK+ ++E A  +L +M+D+G   +      +I  L  +GN
Sbjct: 744 CKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGN 783



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 3/167 (1%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF-G 60
           I+ L E  +++    LL +M  + ++ +   F  +I ++ +V   + A ++F       G
Sbjct: 636 IQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICG 695

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            K    +Y+ + + LLA  +      +   +   G E   F Y  L+ +LCK + ++ A 
Sbjct: 696 QKEG--LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVAS 753

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV 167
            +L +M +KG   D  +   ++  + K+G  +EA   A +     SV
Sbjct: 754 GILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASV 800


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 280/598 (46%), Gaps = 59/598 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   MK +G S +   F  +I+   + G    A  +F  + + G+ P+V  YN ++    
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R +    I   M+++G  P+ +TYN L+  LC + + + A +LL     +G  P  V
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 393

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++T +++  C   + ++A  +  +  S      + V+  LIN L K+ +++EA  LL E+
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PNVITY++II   C  G V+ +L +L  M   GC PN  ++ SL+ G +   + 
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H+A  L  +M ++G +PNV+ Y+TL+ G C     D A  +   ME+N   P+   Y+ L
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            D   KAG    A + ++ ++  G +   V YT ++    +      A +LIE+M  E C
Sbjct: 574 TDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC 630

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P++ T++  +  LC   R++ A+ +LDQM        I  Y  L+D +LR  +   A  
Sbjct: 631 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 690

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  E+   G + +  TY   ++  C+ G + +A  L+ KM  EG   D +T+NI+I    
Sbjct: 691 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 750

Query: 492 KQGKVNNAIQLLDRIRGG------------------------------GEWN-------- 513
             G ++ A   L R+ G                               G WN        
Sbjct: 751 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITW 810

Query: 514 ------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
                       P + +Y+SL+ G C +G ++EA + L  M  +G+ PN   + +L++
Sbjct: 811 QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 171/665 (25%), Positives = 294/665 (44%), Gaps = 135/665 (20%)

Query: 19  QQMKVEGVSCSEG-----VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +++ V  ++CS+      V    I + RR G A  AL             + K YN  L 
Sbjct: 110 ERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLAL-------------SPKCYNFALR 156

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA---YKLLVEMGNK- 129
           +L   +    +  +YS + +DG+ P+  TYN ++K+ CK   +  A   ++LL+E G + 
Sbjct: 157 SLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEP 216

Query: 130 -------------------------------GCAPDAVSYTTIVSSICKLGQVEEARELA 158
                                          GC  +  SYT ++  +C+   V EA  L 
Sbjct: 217 ETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLF 276

Query: 159 MRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           +          V  +  LI+GLCK  ++ +A  L   M   G+ P+V+TY+ +I     +
Sbjct: 277 LMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL 336

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +L I   M   GC+P+  ++ +L+ G L   +T EA +L N  ++EGF P VV +
Sbjct: 337 GRMNDALKIKELMEKNGCHPDDWTYNTLIYG-LCDQKTEEAEELLNNAVKEGFTPTVVTF 395

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCP------------------------------- 302
           + LI+G C     D+A+ +  +M  + C                                
Sbjct: 396 TNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISA 455

Query: 303 ----PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               PNV TY+++IDG+ K+G +  A ++   M  +GC PN   Y  ++  L ++   H+
Sbjct: 456 NGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHK 515

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A +L+ KM  +   PN +T+ T ++G C     D A +L + M+Q    P+   Y  L D
Sbjct: 516 AMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTD 575

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L +  R +EA+  +    + G+ L  V Y T++ G  +AG    A  L+ +M+ EG   
Sbjct: 576 ALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTP 632

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDR--IRG---------------------------- 508
           D+ T++++++A CKQ ++N A+ +LD+  +RG                            
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 692

Query: 509 ----GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
                    P   +YT  +   C  G +++A   + KM  EG+ P+  T+N+L+      
Sbjct: 693 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI----DG 748

Query: 565 LGHLG 569
            GH+G
Sbjct: 749 CGHMG 753



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 239/521 (45%), Gaps = 18/521 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   + LL ++   G+  +   + S+I+ Y + G  + AL++   +   G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN ++  L+ + +      + + M++DG+ PNV TY  LL+  C  +  D A+
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKE 178
           +L   M   G  PD  +Y  +  ++CK G+ EEA    +R G  ++   Y  LI+G  K 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              + A  L+  M+D G  P+  TYS ++ +LC    +  +L IL QM +RG    I ++
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T L+   L  G+   A  ++N M   G  P+   Y+  I+  C  G +++A  +  +ME 
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+V TY+ LIDG    G +  A     RM+   C PN   Y  ++K L + N+ + 
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 359 AH----------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
                              L+E+M      P   T+++ I G C  GR++ A  LLD M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                PN   Y  L+         ++A   V+ + +CG Q  + +Y  ++ G+C  G   
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFE 912

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   L   +L  G   D + + I+     K G V+   Q+L
Sbjct: 913 KVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 259/569 (45%), Gaps = 25/569 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + +  + LL     EG + +   F ++IN Y      + AL+M  ++     K  ++++ 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++++L+ ++R      + + +  +G+ PNV TY  ++   CK+ +VD A ++L  M   
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEA 184
           GC P+A +Y +++  + K  ++ +A  L  +         V  Y  L+ G C EH  + A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L   M   G+ P+   Y+ +  +LC  G  E +   + +   +G       +T+L+ G
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDG 608

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G T  A+ L  RMI EG  P+   YS L+H LC    ++EA+ +  QM        
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y+ LID   + G    A +++N M S+G  P+   YT  +   C+      A  LI 
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM  E   P+ VT+N  I G    G +D A   L +M    C PN  TY  LL  LL+ N
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 425 ----------------RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
                            +   ++L+  + K G+   + TY++++ G C+AG + EA  LL
Sbjct: 789 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G   +   + ++I   C       A+  +  +   G + P + SY  L+ G+CN
Sbjct: 849 DHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECG-FQPQLESYRLLVVGLCN 907

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            G  ++       +L  G   +   W +L
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKIL 936



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 243/505 (48%), Gaps = 44/505 (8%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +RDG      ++  LL  L +        +L+V M N  C+  A        +I  + + 
Sbjct: 82  RRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLN--CSDTAEDMRVSADAIQAIRRT 139

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             AR LA+        YN  +  L +    E    +  ++V  G+ P+ +TY+T+I S C
Sbjct: 140 GSAR-LAL----SPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYC 194

Query: 212 DVGNVETS-----------------------LG------------ILGQMFVRGCNPNIH 236
             G++ T+                       LG            +   M + GC  N +
Sbjct: 195 KEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEY 254

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+T L++G        EA  L+  M R+G  PNV A++ LI GLC +G + +A  +   M
Sbjct: 255 SYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 314

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +N   P+V TY+A+I G++K G +  A +I   M  NGC P+   Y  ++  LC     
Sbjct: 315 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT- 373

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L+     E   P  VTF   I G C   + D A+++ ++M   +C  ++  + +L
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKL 433

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++ L++ +R+KEA EL+ EI   G+  N++TY +I+ G C++G V  A ++L  M  +G 
Sbjct: 434 INSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 493

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + +A T+N ++Y   K  K++ A+ LL +++  G   P++I+YT+LL G C+      AF
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG-IIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
              + M   G+ P+   + VL  +L
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDAL 577



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 21/314 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L QM + G+ C+   +  +I+   R G  + A +M+  +   G KP+   Y   +++  
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   M+R+G+ P+V TYNIL+        +D A+  L  M    C P+  
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 775

Query: 137 SYTTIVSSICK----------------LGQVEEARELAMR-----FGSGVSVYNALINGL 175
           +Y  ++  + K                L +++   +L  R         V+ Y++LI G 
Sbjct: 776 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++EEA  LL  M  +G+ PN   Y+ +I   CD    E +L  +  M   G  P +
Sbjct: 836 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQL 895

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+  L+ G    G   +   L+  ++  G+  + VA+  L  GL   G +D    +   
Sbjct: 896 ESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSI 955

Query: 296 MEENSCPPNVTTYS 309
           ME+  C  +  TY+
Sbjct: 956 MEKRYCCISSQTYA 969


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 163/598 (27%), Positives = 280/598 (46%), Gaps = 59/598 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   MK +G S +   F  +I+   + G    A  +F  + + G+ P+V  YN ++    
Sbjct: 275 LFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYS 334

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R +    I   M+++G  P+ +TYN L+  LC + + + A +LL     +G  P  V
Sbjct: 335 KLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVV 393

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++T +++  C   + ++A  +  +  S      + V+  LIN L K+ +++EA  LL E+
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PNVITY++II   C  G V+ +L +L  M   GC PN  ++ SL+ G +   + 
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H+A  L  +M ++G +PNV+ Y+TL+ G C     D A  +   ME+N   P+   Y+ L
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            D   KAG    A + ++ ++  G +   V YT ++    +      A +LIE+M  E C
Sbjct: 574 TDALCKAGR---AEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGC 630

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P++ T++  +  LC   R++ A+ +LDQM        I  Y  L+D +LR  +   A  
Sbjct: 631 TPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKR 690

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  E+   G + +  TY   ++  C+ G + +A  L+ KM  EG   D +T+NI+I    
Sbjct: 691 MYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCG 750

Query: 492 KQGKVNNAIQLLDRIRGG------------------------------GEWN-------- 513
             G ++ A   L R+ G                               G WN        
Sbjct: 751 HMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITW 810

Query: 514 ------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
                       P + +Y+SL+ G C +G ++EA + L  M  +G+ PN   + +L++
Sbjct: 811 QLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 170/665 (25%), Positives = 293/665 (44%), Gaps = 135/665 (20%)

Query: 19  QQMKVEGVSCSEG-----VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +++ V  ++CS+      V    I + RR G A  AL             + K YN  L 
Sbjct: 110 ERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLAL-------------SPKCYNFALR 156

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA---YKLLVEMGNK- 129
           +L   +    +  +YS + +DG+ P+  TYN ++K+ CK   +  A   ++LL+E G + 
Sbjct: 157 SLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEP 216

Query: 130 -------------------------------GCAPDAVSYTTIVSSICKLGQVEEARELA 158
                                          GC  +  SYT ++  +C    V +A  L 
Sbjct: 217 ETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLF 276

Query: 159 MRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           +          V  +  LI+GLCK  ++ +A  L   M   G+ P+V+TY+ +I     +
Sbjct: 277 LMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKL 336

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +L I   M   GC+P+  ++ +L+ G L   +T EA +L N  ++EGF P VV +
Sbjct: 337 GRMNDALKIKELMEKNGCHPDDWTYNTLIYG-LCDQKTEEAEELLNNAVKEGFTPTVVTF 395

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCP------------------------------- 302
           + LI+G C     D+A+ +  +M  + C                                
Sbjct: 396 TNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISA 455

Query: 303 ----PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               PNV TY+++IDG+ K+G +  A ++   M  +GC PN   Y  ++  L ++   H+
Sbjct: 456 NGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHK 515

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A +L+ KM  +   PN +T+ T ++G C     D A +L + M+Q    P+   Y  L D
Sbjct: 516 AMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTD 575

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L +  R +EA+  +    + G+ L  V Y T++ G  +AG    A  L+ +M+ EG   
Sbjct: 576 ALCKAGRAEEAYSFIV---RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTP 632

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDR--IRG---------------------------- 508
           D+ T++++++A CKQ ++N A+ +LD+  +RG                            
Sbjct: 633 DSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMY 692

Query: 509 ----GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
                    P   +YT  +   C  G +++A   + KM  EG+ P+  T+N+L+      
Sbjct: 693 NEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILI----DG 748

Query: 565 LGHLG 569
            GH+G
Sbjct: 749 CGHMG 753



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 239/521 (45%), Gaps = 18/521 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +   + LL ++   G+  +   + S+I+ Y + G  + AL++   +   G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN ++  L+ + +      + + M++DG+ PNV TY  LL+  C  +  D A+
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKE 178
           +L   M   G  PD  +Y  +  ++CK G+ EEA    +R G  ++   Y  LI+G  K 
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              + A  L+  M+D G  P+  TYS ++ +LC    +  +L IL QM +RG    I ++
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T L+   L  G+   A  ++N M   G  P+   Y+  I+  C  G +++A  +  +ME 
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+V TY+ LIDG    G +  A     RM+   C PN   Y  ++K L + N+ + 
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792

Query: 359 AH----------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
                              L+E+M      P   T+++ I G C  GR++ A  LLD M 
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                PN   Y  L+         ++A   V+ + +CG Q  + +Y  ++ G+C  G   
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFE 912

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   L   +L  G   D + + I+     K G V+   Q+L
Sbjct: 913 KVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQML 953



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 259/569 (45%), Gaps = 25/569 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + +  + LL     EG + +   F ++IN Y      + AL+M  ++     K  ++++ 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++++L+ ++R      + + +  +G+ PNV TY  ++   CK+ +VD A ++L  M   
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEA 184
           GC P+A +Y +++  + K  ++ +A  L  +         V  Y  L+ G C EH  + A
Sbjct: 492 GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNA 551

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L   M   G+ P+   Y+ +  +LC  G  E +   + +   +G       +T+L+ G
Sbjct: 552 FRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDG 608

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G T  A+ L  RMI EG  P+   YS L+H LC    ++EA+ +  QM        
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y+ LID   + G    A +++N M S+G  P+   YT  +   C+      A  LI 
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM  E   P+ VT+N  I G    G +D A   L +M    C PN  TY  LL  LL+ N
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788

Query: 425 ----------------RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
                            +   ++L+  + K G+   + TY++++ G C+AG + EA  LL
Sbjct: 789 LAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G   +   + ++I   C       A+  +  +   G + P + SY  L+ G+CN
Sbjct: 849 DHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECG-FQPQLESYRLLVVGLCN 907

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            G  ++       +L  G   +   W +L
Sbjct: 908 EGDFEKVKSLFCDLLELGYNHDEVAWKIL 936



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 243/505 (48%), Gaps = 44/505 (8%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +RDG      ++  LL  L +        +L+V M N  C+  A        +I  + + 
Sbjct: 82  RRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLN--CSDTAEDMRVSADAIQAIRRT 139

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             AR LA+        YN  +  L +    E    +  ++V  G+ P+ +TY+T+I S C
Sbjct: 140 GSAR-LAL----SPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYC 194

Query: 212 DVGNVETS-----------------------LG------------ILGQMFVRGCNPNIH 236
             G++ T+                       LG            +   M + GC  N +
Sbjct: 195 KEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEY 254

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+T L++G        +A  L+  M R+G  PNV A++ LI GLC +G + +A  +   M
Sbjct: 255 SYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAM 314

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +N   P+V TY+A+I G++K G +  A +I   M  NGC P+   Y  ++  LC     
Sbjct: 315 PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT- 373

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L+     E   P  VTF   I G C   + D A+++ ++M   +C  ++  + +L
Sbjct: 374 EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKL 433

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++ L++ +R+KEA EL+ EI   G+  N++TY +I+ G C++G V  A ++L  M  +G 
Sbjct: 434 INSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGC 493

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + +A T+N ++Y   K  K++ A+ LL +++  G   P++I+YT+LL G C+      AF
Sbjct: 494 QPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG-IIPNVITYTTLLQGQCDEHDFDNAF 552

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
              + M   G+ P+   + VL  +L
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDAL 577



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 21/314 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L QM + G+ C+   +  +I+   R G  + A +M+  +   G KP+   Y   +++  
Sbjct: 656 ILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYC 715

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +   M+R+G+ P+V TYNIL+        +D A+  L  M    C P+  
Sbjct: 716 KEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYW 775

Query: 137 SYTTIVSSICK----------------LGQVEEARELAMR-----FGSGVSVYNALINGL 175
           +Y  ++  + K                L +++   +L  R         V+ Y++LI G 
Sbjct: 776 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++EEA  LL  M  +G+ PN   Y+ +I   CD    E +L  +  M   G  P +
Sbjct: 836 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQL 895

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+  L+ G    G   +   L+  ++  G+  + VA+  L  GL   G +D    +   
Sbjct: 896 ESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSI 955

Query: 296 MEENSCPPNVTTYS 309
           ME+  C  +  TY+
Sbjct: 956 MEKRYCCISSQTYA 969


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 281/542 (51%), Gaps = 6/542 (1%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           I+ + + G  + A K F+ ++  GL+P    Y  ++  L    R      ++  M+ +  
Sbjct: 253 IDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERD 312

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P  + YN ++       R D AYKLL  +  +GC P  VS+ +I++ + K  +V+EA  
Sbjct: 313 VPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALT 372

Query: 157 L--AMRFGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           L   M+  +   +S YN +I+ LC   ++ EA+ +  EM   G+ PN+++ + ++  LC 
Sbjct: 373 LFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCK 432

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              +E +  I      RGCNPN  ++ SL+ G    G+  +A  L+ +M+  G   N + 
Sbjct: 433 ANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPII 492

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y++LI     +G  ++   +  +M      P++T  +  +D   KAG +     I+  M 
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S G  P+V +Y+ ++  L +     +  ++ + M+ +    +   +N  + GLC  G+VD
Sbjct: 553 SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVD 612

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A ++L++MK     P + TY  ++DGL +++R+ EA+ L  E +  GI+LN++ Y++++
Sbjct: 613 KAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLI 672

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G  + G + EA+ +L +M+ +G   +  T+N ++ A  K  +++ A+     ++   + 
Sbjct: 673 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMK-EMKC 731

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
           +P+  +Y+ L+ G+C      +AF++ Q+M  +G+ PN  T+  ++  L + +G++   Y
Sbjct: 732 SPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGL-AKVGNITDAY 790

Query: 573 IL 574
            L
Sbjct: 791 SL 792



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 279/550 (50%), Gaps = 12/550 (2%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           ++ +K      +  V I  +   R+    E+AL++  ++++ G + +V ++  ++ AL  
Sbjct: 167 MRHLKFRPPFSAYTVLIGALAEARQ---PERALELLRQMQDVGYEVSVPLFTTLVRALAR 223

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           E +      +   +K   +EP++  YN+ +    K   VD A+K   E+   G  PD VS
Sbjct: 224 EGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVS 283

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           YT++V  +CK G++ EA EL     A R       YN +I G     + ++A+ LL  + 
Sbjct: 284 YTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLR 343

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           +RG  P+V+++++I++ L     V+ +L +   M  +   PNI ++  ++    + GR +
Sbjct: 344 ERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVN 402

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA  + + M   G  PN+++ + ++  LC    ++EA  +     E  C PN  TY +LI
Sbjct: 403 EAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLI 462

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DG  K G +  A +++ +M+  G   N + YT +++    +      H + ++M      
Sbjct: 463 DGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGR 522

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+    NT++  +   G V+    + + MK +  LP++ +Y+ L+ GL +  + +E   +
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNI 582

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + + G  L+   YN ++ G+C++G V +A+++L +M ++       T+  I+    K
Sbjct: 583 FQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK 642

Query: 493 QGKVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             +++ A  L +  +  G E N  +I Y+SL+ G    G + EA++ L++M+ +G+ PN 
Sbjct: 643 IDRLDEAYMLFEEAKSKGIELN--VILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700

Query: 552 ATWNVLVRSL 561
            TWN L+ +L
Sbjct: 701 YTWNSLMDAL 710



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/564 (28%), Positives = 275/564 (48%), Gaps = 15/564 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           +LGE  E+ G      QM+ E  V C+   + ++I  Y      + A K+  R+RE G  
Sbjct: 296 RLGEAEELFG------QMEAERDVPCAYA-YNTMIMGYGSAERFDDAYKLLERLRERGCI 348

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P+V  +N IL  L  + +      ++  MK+D  +PN+ TYNI++  LC   RV+ AYK+
Sbjct: 349 PSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKI 407

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVS--VYNALINGLCK 177
             EM   G  P+ +S   +V  +CK  Q+EEA    E A   G   +   Y +LI+GL K
Sbjct: 408 RDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGK 467

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           + KI++A+ L  +M+D G D N I Y+++I +    G  E    I  +M  RG  P++  
Sbjct: 468 KGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTL 527

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
             + +      G   +   ++  M   GFLP+V +YS LIHGL   G   E  ++   M 
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +     +   Y+A++DG  K+G +  A ++   M      P V  Y  +V  L + +   
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A+ L E+   +    N + +++ I G    GR+D A  +L++M +    PN+ T+N L+
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L++   + EA      +++     N  TY+ +++G+CR     +AF    +M  +G  
Sbjct: 708 DALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLI 767

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T+  +I    K G + +A  L +R +  G   PD  S+ +L+ G+ N+    EA+ 
Sbjct: 768 PNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGI-PDSASFNALIEGMSNANRPMEAYQ 826

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
             ++    G   N  T   L+ +L
Sbjct: 827 VFEETRLRGCRLNVKTCISLLDAL 850



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 206/434 (47%), Gaps = 5/434 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+++L +  +++    + +     G + +   + S+I+   + G  + A ++F ++ + G
Sbjct: 426 MVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG 485

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                 IY  ++       R    + IY  M R G  P++   N  +  + K   V+   
Sbjct: 486 HDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGR 545

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
            +  +M + G  PD  SY+ ++  + K GQ  E   +  AM    F      YNA+++GL
Sbjct: 546 AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGL 605

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+++A+ +L EM  + + P V TY +I+  L  +  ++ +  +  +   +G   N+
Sbjct: 606 CKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 665

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             ++SL+ G+   GR  EA  +   M+++G  PNV  +++L+  L     +DEA+     
Sbjct: 666 ILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQS 725

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E  C PN  TYS LI+G  +      A   W  M   G  PNVV YT M+  L +   
Sbjct: 726 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGN 785

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A+SL E+       P++ +FN  I+G+    R   A ++ ++ +   C  N+ T   
Sbjct: 786 ITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCIS 845

Query: 416 LLDGLLRVNRVKEA 429
           LLD L +   +++A
Sbjct: 846 LLDALNKTECLEQA 859



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 207/436 (47%), Gaps = 6/436 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A ++F    E G  P    Y  ++D L  + +      ++  M   G + N   Y  L
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSL 496

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           ++    + R +  +K+  EM  +G  PD     T +  + K G+VE+ R +     +  F
Sbjct: 497 IRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF 556

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y+ LI+GL K  +  E   +   M  +G   +   Y+ ++  LC  G V+ +  
Sbjct: 557 LPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYE 616

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M V+  +P + ++ S++ G     R  EA  L+     +G   NV+ YS+LI G  
Sbjct: 617 VLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFG 676

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA  +  +M +    PNV T+++L+D   K   +  A   +  M    CSPN  
Sbjct: 677 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTY 736

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++  LC+   +++A    ++M  +   PN VT+ T I GL   G +  A  L ++ 
Sbjct: 737 TYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERF 796

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           K    +P+  ++N L++G+   NR  EA+++  E    G +LN+ T  ++L  + +   +
Sbjct: 797 KTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECL 856

Query: 462 VEAFQLLGKMLIEGTK 477
            +A  ++G +L E  K
Sbjct: 857 EQA-AIVGAVLSEIAK 871



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 228/466 (48%), Gaps = 11/466 (2%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
            YN +L  L  +  +    K+L EM + G      +   +V+++ +  ++E+A  +  AM
Sbjct: 110 AYNAVLPFLSHD--LAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM 167

Query: 160 R---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           R   F    S Y  LI  L +  + E A  LL +M D G + +V  ++T++ +L   G +
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +L ++ ++      P+I  +   +  +   G    A   ++ +   G  P+ V+Y+++
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  LC  G + EA  +  QME     P    Y+ +I G+  A     A ++  R+   GC
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGC 347

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV++  ++  L +     +A +L + M  ++  PN  T+N  I  LC  GRV+ A K
Sbjct: 348 IPSVVSFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYK 406

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + D+M+     PN+ + N ++D L + N+++EA  +     + G   N VTY +++ G+ 
Sbjct: 407 IRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLG 466

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPD 515
           + G + +A++L  KML  G   + I +  +I  +   G+  +  ++  + IR GG   PD
Sbjct: 467 KKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG--RPD 524

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +    + +  +  +G +++     + M + G  P+  ++++L+  L
Sbjct: 525 LTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGL 570



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 202/396 (51%), Gaps = 4/396 (1%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNA++  L   H +     +L EM   G        + ++++L     +E +  ++G M
Sbjct: 110 AYNAVLPFLS--HDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAM 167

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 P   ++T L+       +   A +L  +M   G+  +V  ++TL+  L   G M
Sbjct: 168 RHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQM 227

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           + A+++  +++ +   P++  Y+  ID F KAG++  A + ++ + ++G  P+ V+YT M
Sbjct: 228 EPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSM 287

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           V VLC+     +A  L  +M  E   P    +NT I G     R D A KLL+++++  C
Sbjct: 288 VWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGC 347

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ ++N +L  L +  +V EA  L  ++ K   + NI TYN I+  +C AG V EA++
Sbjct: 348 IPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYK 406

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +  +M + G   + ++ NI++   CK  ++  A ++ +     G  NP+ ++Y SL+ G+
Sbjct: 407 IRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG-CNPNSVTYCSLIDGL 465

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              G + +A+   +KML+ G   N   +  L+R+ F
Sbjct: 466 GKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFF 501


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  251 bits (640), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 275/559 (49%), Gaps = 9/559 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR--IREFGLKPTVKIYNHI 71
           V+ LL+ MK + +  +   F  VI+ +   GL ++AL+ FYR  I+     P V   N +
Sbjct: 85  VESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALE-FYRTFIKIHHCVPDVFSCNSL 143

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L+ L+   +  +   +Y  M     E + +T  I++K LCK  +V+  +KL+ +   +GC
Sbjct: 144 LNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGC 203

Query: 132 APDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFW 186
            P+ V Y T++   CK G  E A    +EL M+ F   V  Y A+ING CK+ K E    
Sbjct: 204 MPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDK 263

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           LL EM +RG+D ++  Y+ II +    G    +   +G M   GC+P++ ++  L+ G  
Sbjct: 264 LLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSC 323

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G  H+A  L  + I+ G LPN V+Y+ LIH  C  G    A+ +  +M E    P++ 
Sbjct: 324 SCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLV 383

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ALI G   AG +  A  + N+M+  G  P+   Y  ++  LC+      A  L+ +M
Sbjct: 384 TYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEM 443

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +N  P+     T + G    G  + A KL +   +    P +  YN ++ G  +   +
Sbjct: 444 LDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMM 503

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           K+A      + +     +  TY+TI+ G  +   +  A ++ G M+    K + +T+ ++
Sbjct: 504 KDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLL 563

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I  +C  G +N A +   ++       P++++YT L+   C    + +A  + ++ML E 
Sbjct: 564 INGFCLSGDINRAEKTFKQML-SLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEK 622

Query: 547 ICPNFATWNVLVRSLFSNL 565
             PN  T+N L+  L +N+
Sbjct: 623 CLPNDVTYNYLMNGLTNNV 641



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 254/540 (47%), Gaps = 64/540 (11%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP-------- 86
           ++I+ Y + G  E+A  +F  ++  G  PTVK Y  I++    + +F +++         
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271

Query: 87  -------IYSN--------------------MKRDGMEPNVFTYNILLKALCKNNRVDGA 119
                  IY+N                    M + G +P++ TYNIL+   C    V  A
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALING 174
            +LL +   +G  P+ VSYT ++ + CK G+   A +L ++         +  Y ALI+G
Sbjct: 332 EQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L    +++ A  +  +MV++G+ P+   Y+ ++S LC  G +  +  +L +M  +   P+
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
                +L+ G++  G   EA  L+   I +G  P VV Y+ +I G C  G M +A+    
Sbjct: 452 AFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFK 511

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +    P+  TYS +IDG+ K  +L GA +++  M+   C PNVV YT ++   C + 
Sbjct: 512 RMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSG 571

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             ++A    ++M      PN VT+   I   C    +  A    +QM   +CLPN  TYN
Sbjct: 572 DINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYN 631

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++GL   N V    + V   ++     N               +V+E+F   G M+ +
Sbjct: 632 YLMNGL--TNNV----DFVISNQRSEQTEN--------------SLVLESF---GMMISD 668

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G    A ++N I+   C+   V +A+ L D++   G + PD +S  +LL G+C  G  Q+
Sbjct: 669 GWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKG-FLPDPVSLVALLHGLCLEGRSQD 727



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 249/539 (46%), Gaps = 65/539 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +K + +    L +++K++G   +   + ++IN + + G  E   K+   + E G
Sbjct: 213 LIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERG 272

Query: 61  LKPTVKIYNHILDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           L  ++ IYN+I+DA      R    + +   M + G +P++ TYNIL+   C    V  A
Sbjct: 273 LDVSIHIYNNIIDAQFKHGCRIEAADTV-GWMIKSGCDPDMATYNILITGSCSCGEVHKA 331

Query: 120 YKLL-----------------------------------VEMGNKGCAPDAVSYTTIVSS 144
            +LL                                   ++M  +G  PD V+Y  ++  
Sbjct: 332 EQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391

Query: 145 ICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +   G+V+ A   R   +  G     ++YN L++GLCK+ ++  A  LL EM+D+ + P+
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
               +T++      G+ E +  +      +G +P +  + +++KGY   G   +A   + 
Sbjct: 452 AFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFK 511

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           RMI+    P+   YST+I G      +  A+ +   M + +C PNV TY+ LI+GF  +G
Sbjct: 512 RMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSG 571

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           ++  A + + +M+S    PNVV YT ++   C+     +A S  E+M  E C PN VT+N
Sbjct: 572 DINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYN 631

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + GL     VD+ +   +Q  +        T N L         V E+F ++      
Sbjct: 632 YLMNGL--TNNVDFVIS--NQRSE-------QTENSL---------VLESFGMMISD--- 668

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
           G      +YN+IL  +C+  MV  A  L  KM+ +G   D ++   +++  C +G+  +
Sbjct: 669 GWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQD 727



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 207/438 (47%), Gaps = 19/438 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   + LL+Q    G+  ++  +  +I++Y + G   +AL +  ++ E G KP +  Y 
Sbjct: 327 EVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYA 386

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L+      +   + + M   G+ P+   YN+L+  LCK  R+  A  LL EM ++
Sbjct: 387 ALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQ 446

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEA 184
             APDA    T+V    + G  EEA+   EL +  G   GV  YNA+I G CK   +++A
Sbjct: 447 NVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDA 506

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                 M+     P+  TYSTII     + ++  +L + G M    C PN+ ++T L+ G
Sbjct: 507 LLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLING 566

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           + L G  + A   + +M+     PNVV Y+ LI   C   ++ +A S   QM    C PN
Sbjct: 567 FCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPN 626

Query: 305 VTTYSALIDGFAKAGNLLGASQ------------IWNRMISNGCSPNVVAYTCMVKVLCQ 352
             TY+ L++G     + + ++Q             +  MIS+G      +Y  ++  LCQ
Sbjct: 627 DVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQ 686

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV-DWAMKLLDQMKQYECLPNIT 411
           + M   A  L +KM  +   P+ V+    + GLC  GR  DW   +  ++ + E L    
Sbjct: 687 HKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNERE-LQVAV 745

Query: 412 TYNELLDGLLRVNRVKEA 429
            Y+E LD  L   +  EA
Sbjct: 746 KYSEKLDAFLSQGQTSEA 763


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 284/551 (51%), Gaps = 12/551 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +++++K      +  V I  +   RR    E+AL++  +++E G +  V ++  ++ AL 
Sbjct: 169 VMRRLKFRPAFSAYTVLIGALAEARR---PERALELLRQMQEVGYEVGVHLFTTLVRALA 225

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E + +    +   +K   +EP++  YN+ +    K   VD A+K   E+  +G  PD V
Sbjct: 226 REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDV 285

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           SYT+++  +CK G++ EA EL  +  +  SV     YN +I G     + E+A+ LL  +
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +RG  P+V+++++I++ L     V+ +L +  ++  +   PN  ++  ++    LGGR 
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRV 404

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  + + M      PN++  + ++  LC    ++EA  +     +  C P+  TY +L
Sbjct: 405 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 464

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A +++ +M+  G + N V YT +++    +      H + +++    C
Sbjct: 465 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+    NT++  +   G V+    + + ++ Y  LP++ +Y+ L+ GL +  + +E   
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 584

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +   +++ G  L+   YN ++ G C++G V +A+++L +M  +  +    T+  I+    
Sbjct: 585 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 644

Query: 492 KQGKVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           K  +++ A  L +  +  G E N  ++ Y+SL+ G    G + EA++ L++M+ +G+ PN
Sbjct: 645 KIDRLDEAYMLFEEAKSKGIELN--VVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702

Query: 551 FATWNVLVRSL 561
             TWN L+ +L
Sbjct: 703 VYTWNSLLDAL 713



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 278/542 (51%), Gaps = 6/542 (1%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           I+ + + G  + A K F+ ++  GLKP    Y  ++  L    R      +++ M+ +  
Sbjct: 256 IDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 315

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P  + YN ++       R + AYKLL  +  +GC P  VS+ +I++ + K  +V+EA  
Sbjct: 316 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS 375

Query: 157 L--AMRFGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           L   M+  +    S YN +I+ LC   ++EEA+ +L EM    + PN++T + ++  LC 
Sbjct: 376 LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCK 435

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              +E +  I      RGCNP+  ++ SL+ G    G+  EA  L+ +M+  G   N V 
Sbjct: 436 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 495

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y++LI     +G  ++   +  ++    C P++T  +  +D   KAG +     I+  + 
Sbjct: 496 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 555

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S G  P+V +Y+ ++  L +     +  ++   M  +    +   +N  + G C  G+V 
Sbjct: 556 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 615

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A ++L++MK+    P + TY  ++DGL +++R+ EA+ L  E +  GI+LN+V Y++++
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLI 675

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G  + G + EA+ +L +M+ +G   +  T+N ++ A  K  ++N A+     ++   + 
Sbjct: 676 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK-EMKC 734

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P+  +Y+ L+ G+C      +AF++ Q M  +G+ PN  T+  ++  L + +G++   Y
Sbjct: 735 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL-AKVGNITDAY 793

Query: 573 IL 574
            L
Sbjct: 794 SL 795



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/575 (28%), Positives = 281/575 (48%), Gaps = 50/575 (8%)

Query: 4   KLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           +LGE  E      L  QM+ E  V C+   + ++I  Y   G  E A K+  R+RE G  
Sbjct: 299 RLGEAEE------LFAQMEAERSVPCAYA-YNTMIMGYGSAGRFEDAYKLLERLRERGCI 351

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P+V  +N IL  L  + +      ++  MK+D  EPN  TYNI++  LC   RV+ AY++
Sbjct: 352 PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRI 410

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVS--VYNALINGLCK 177
           L EM +    P+ ++   +V  +CK  ++EEA    E A + G       Y +LI+GL K
Sbjct: 411 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 470

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN--- 234
           + +++EA+ L  +M+D G + N + Y+++I +    G  E    I  ++  RGC P+   
Sbjct: 471 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 530

Query: 235 --------------------------------IHSFTSLLKGYLLGGRTHEASDLWNRMI 262
                                           + S++ L+ G    G+  E S++++ M 
Sbjct: 531 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 590

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++GF  +  AY+ ++ G C +G + +A  +  +M+E    P V TY A++DG AK   L 
Sbjct: 591 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 650

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  ++    S G   NVV Y+ ++    +     +A+ ++E+M  +   PN  T+N+ +
Sbjct: 651 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
             L     ++ A+     MK+ +C PN  TY+ L++GL RV +  +AF    +++K G+ 
Sbjct: 711 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 770

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N+VTY T++ G+ + G + +A+ L  +    G   DA +FN +I       +   A Q+
Sbjct: 771 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQV 830

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            +  R  G    +I S  SLL  +  S  +++A I
Sbjct: 831 FEETRLRG-CRINIKSCISLLDALNKSECLEQAAI 864



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 172/331 (51%), Gaps = 2/331 (0%)

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P   ++T L+       R   A +L  +M   G+   V  ++TL+  L   G + +A++
Sbjct: 176 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 235

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +++ +   P++  Y+  ID F KAGN+  A + ++ + + G  P+ V+YT M+ VLC
Sbjct: 236 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  L  +M  E   P    +NT I G    GR + A KLL+++++  C+P++ 
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           ++N +L  L +  +V EA  L  E+ K   + N  TYN I+  +C  G V EA+++L +M
Sbjct: 356 SFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
                  + +T NI++   CK  K+  A ++ +     G  NPD ++Y SL+ G+   G 
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRG-CNPDCVTYCSLIDGLGKKGQ 473

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           + EA+   +KML+ G   N   +  L+R+ F
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFF 504



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 191/392 (48%), Gaps = 2/392 (0%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L   L +  ++++A   +  M      P    Y+ +I +L +    E +L +L QM   G
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVG 209

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
               +H FT+L++     G+  +A  L + +      P++V Y+  I      G++D A 
Sbjct: 210 YEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAW 269

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
              ++++     P+  +Y+++I    KAG L  A +++ +M +    P   AY  M+   
Sbjct: 270 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 329

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
                F  A+ L+E++    C P+ V+FN+ +  L    +VD A+ L + MK+ +  PN 
Sbjct: 330 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNS 388

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           +TYN ++D L    RV+EA+ ++ E+E   +  N++T N ++  +C+A  + EA+++   
Sbjct: 389 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 448

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
               G   D +T+  +I    K+G+V+ A +L +++   G  N + + YTSL+      G
Sbjct: 449 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGH-NANPVVYTSLIRNFFIHG 507

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             ++     ++++  G  P+    N  +  +F
Sbjct: 508 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVF 539



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 141/287 (49%), Gaps = 5/287 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +   MK +G +     + +V++ + + G   +A ++   ++E  ++PTV  Y  I+D L 
Sbjct: 585 IFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLA 644

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R      ++   K  G+E NV  Y+ L+    K  R+D AY +L EM  KG  P+  
Sbjct: 645 KIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 704

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ +++ ++ K  ++ EA         M+       Y+ LINGLC+  K  +AF    +M
Sbjct: 705 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 764

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+ PNV+TY+T+IS L  VGN+  +  +  +    G  P+  SF +L++G     R 
Sbjct: 765 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 824

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            EA  ++      G   N+ +  +L+  L  +  +++A  V   + E
Sbjct: 825 MEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLRE 871


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 278/573 (48%), Gaps = 12/573 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + +L  MK  GV  +   +   I  Y R    E+A  ++  +   G+   V   +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  + RFS    ++  M + G  PN  TY  L+ +L K  R      LL EM ++
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-------SGVSVYNALINGLCKEHKIE 182
           G   D V+YT ++  + K G+ +E ++  +RF        +GV+ Y  LI+ LCK H ++
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKD-TLRFALSDNLSPNGVT-YTVLIDALCKAHNVD 396

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +L EM ++ I PNV+T+S++I+     G ++ +      M  RG NPN+ ++ +L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+        A ++++ M+ EG   N     +L++GL  NG ++EA+++      +   
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +   Y+ LIDG  KAG++  A +    ++     P+ V Y   +  LC    F +A S 
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSF 576

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M      P+  T+NT I   C  G    A+KLL +MK     PN+ TYN L+ GL  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              V++A  L+ E+   G   + +T+  +L    ++  +     +   M+  G   D   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N ++   C  G    A  +L+ + G G   PD I++ +L+ G C S  +  AF    +M
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 543 LNEGICPNFATWNVLVRSLFS--NLGHLGPVYI 573
           L++ I PN AT+N L+  L S   +G  G V I
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 247/496 (49%), Gaps = 13/496 (2%)

Query: 72  LDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           L+ALL  + R  ++ P  + ++     P    YNILL AL  +     A  +L EM  +G
Sbjct: 76  LNALLYSHCRLRLLRPAIALLRSS--RPTTVAYNILLAALSDHAH---APAVLAEMCKRG 130

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGL-----CKEHKIEEAF 185
              D V+  T+++ +C+ GQV+ A  LA R G G++ + +    L             A 
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADRAG-GITPWMSSAGTLSLLDIAGFGDTPAAL 189

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   M  +G+  +V+ Y+T+++  C  G V+ + G+L  M   G +PN+ ++T  +  Y
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA DL+  M+R G L +VV  S L+ GLC +G   EA ++  +M++    PN 
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY  LID  AKAG       +   M+S G   ++V YT ++  L +     +    +  
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              +N  PN VT+   I  LC    VD A ++L +M++    PN+ T++ +++G ++   
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + +A E    +++ GI  N+VTY T++ G  +      A ++   ML EG K++    + 
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           ++    + GK+  A+ L     G G  + D ++YT+L+ G+  +G M  AF + Q++++ 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSG-LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 546 GICPNFATWNVLVRSL 561
            + P+   +NV +  L
Sbjct: 549 NMLPDAVVYNVFINCL 564



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 266/566 (46%), Gaps = 32/566 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L +M+ + +S +   F SVIN + + GL ++A +    ++E G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  ++D             +Y +M  +G++ N F  + L+  L +N +++ A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +    G + D V+YTT                              LI+GL K   
Sbjct: 505 ALFKDASGSGLSLDHVNYTT------------------------------LIDGLFKAGD 534

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF    E++DR + P+ + Y+  I+ LC +G  + +   L +M   G  P+  ++ +
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNT 594

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++  +   G T +A  L + M      PN++ Y+TL+ GL   G++++A  +  +M    
Sbjct: 595 MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  T+  ++   +++  L     I   M++ G   ++  Y  +++VLC + M  +A 
Sbjct: 655 FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++E+M      P+T+TFN  I G C    +D A     QM      PNI T+N LL GL
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             V R+ EA  ++ E+EK G++ N +TY+ +  G  +    VEA +L  +M+ +G     
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+N +I  + K G +  A +L   ++  G  +P   +Y  L+ G        E    L+
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRG-VHPTSCTYDILVSGWSRIRNGTEVKKCLK 893

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLG 566
            M  +G  P+  T + + R+ FS  G
Sbjct: 894 DMKEKGFSPSKGTLSFICRA-FSKPG 918



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 190/423 (44%), Gaps = 13/423 (3%)

Query: 158 AMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           A+RF  +  +  NAL+   C+   +  A  LL     R   P  + Y+ ++++L D  + 
Sbjct: 65  AIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSDHAHA 119

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L +M  RG   +  +  +LL G    G+   A+         G  P + +  TL
Sbjct: 120 P---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA--ALADRAGGITPWMSSAGTL 174

Query: 277 -IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            +  +   G    A+SV+ +M     P +V  Y+ L+ GF +AG +  A  + + M   G
Sbjct: 175 SLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PNV  YT  +   C+     +A  L E M       + VT +  + GLC  GR   A 
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L  +M +    PN  TY  L+D L +  R KE   L+ E+   G+ +++VTY  ++  +
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWL 354

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            + G   E    L   L +    + +T+ ++I A CK   V+ A Q+L  +      +P+
Sbjct: 355 GKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK-SISPN 413

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
           +++++S++ G    G + +A  Y + M   GI PN  T+  L+   F   G    + +  
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473

Query: 576 DIM 578
           D++
Sbjct: 474 DML 476



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 40/441 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  +I+    L +     G+S     + ++I+   + G    A K    + +  
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   +YN  ++ L    +F       + M+  G++P+  TYN ++ + C+      A 
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR------------------------- 155
           KLL EM      P+ ++Y T+V+ +   G VE+A+                         
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 156 -------------ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                        E  M  G  + ++VYN L+  LC      +A  +L EM+  GI P+ 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           IT++ +I   C   +++ +     QM  +  +PNI +F +LL G    GR  EA  +   
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M + G  PN + Y  L  G     +  EA+ +  +M      P V+TY+ALI  F KAG 
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A +++  M   G  P    Y  +V    +     +    ++ M  +   P+  T + 
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 381 FIKGLCGCGRVDWAMKLLDQM 401
             +     G    A +LL  +
Sbjct: 910 ICRAFSKPGMTWQAQRLLKNL 930



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/293 (21%), Positives = 116/293 (39%), Gaps = 40/293 (13%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  +YLL +M   G S S      V+ +  +    +  L +   +   GL   + +YN 
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNT 699

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L           +   M   G+ P+  T+N L+   CK++ +D A+    +M ++ 
Sbjct: 700 LLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN 759

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-------------------------------AM 159
            +P+  ++ T++  +  +G++ EA  +                               AM
Sbjct: 760 ISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAM 819

Query: 160 R---------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           R         F   VS YNALI+   K   + +A  L  +M  RG+ P   TY  ++S  
Sbjct: 820 RLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
             + N       L  M  +G +P+  + + + + +   G T +A  L   + R
Sbjct: 880 SRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 257/511 (50%), Gaps = 25/511 (4%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N ++   +  NR  +   +Y  M+   +  N++++NIL+K  C  +++  +     ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAR------------ELAMRFGSGVSV--------Y 168
            G  PD V++ T++  +C   ++ EA             E    F   V +        +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LINGLC E ++ EA  L+ +MV +G+  +V+TY TI++ +C +G+ +++L +L +M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               P++  +++++      G   +A  L++ M+ +G  PNV  Y+ +I G CS G   +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +   M E    P+V T++ALI    K G L  A ++ + M+     P+ V Y  M+ 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C++N F  A  + + MA     P+ VTFNT I   C   RVD  M+LL ++ +   + 
Sbjct: 410 GFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N TTYN L+ G   V+ +  A +L  E+   G+  + +T N +L+G C    + EA +L 
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             + +    LD + +NIII+  CK  KV+ A  L   +   G   PD+ +Y  ++ G C 
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCG 584

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              + +A +   KM + G  P+ +T+N L+R
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 240/482 (49%), Gaps = 24/482 (4%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFS--------MIN-------PIYSNMKR 93
           +L  F ++ + G +P V  +N +L  L  E+R S        M+         ++  M  
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            G+ P V T+N L+  LC   RV  A  L+ +M  KG   D V+Y TIV+ +CK+G  + 
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279

Query: 154 ARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A  L  +         V +Y+A+I+ LCK+    +A +L  EM+++GI PNV TY+ +I 
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G    +  +L  M  R  NP++ +F +L+   +  G+  EA  L + M+     P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           + V Y+++I+G C +   D+A      M +    P+V T++ +ID + +A  +    Q+ 
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             +   G   N   Y  ++   C+ +  + A  L ++M      P+T+T N  + G C  
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            +++ A++L + ++  +   +   YN ++ G+ + ++V EA++L   +   G++ ++ TY
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N ++ G C    + +A  L  KM   G + D  T+N +I    K G+++ +I+L+  +R 
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635

Query: 509 GG 510
            G
Sbjct: 636 NG 637



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 199/411 (48%), Gaps = 20/411 (4%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N +I    + ++ + A  L  +M  R I  N+ +++ +I   CD   +  SL   G++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL---------------PNVVAY 273
            G  P++ +F +LL G  L  R  EA  L+  M+  GFL               P V+ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLI+GLC  G + EA ++  +M       +V TY  +++G  K G+   A  + ++M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               P+VV Y+ ++  LC++     A  L  +M  +   PN  T+N  I G C  GR   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +LL  M + E  P++ T+N L+   ++  ++ EA +L  E+    I  + VTYN++++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C+     +A  +   M       D +TFN II  YC+  +V+  +QLL  I   G   
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG-LV 464

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +  +Y +L+ G C    +  A    Q+M++ G+CP+  T N+L+     N
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G+      + +++N   ++G  + AL +  ++ E  +KP V IY+ I+D L 
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   S    ++S M   G+ PNVFTYN ++   C   R   A +LL +M  +   PD +
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367

Query: 137 SYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++  ++S+  K G++ EA +L         F   V+ YN++I G CK ++ ++A      
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDA----KH 422

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M D    P+V+T++TII   C    V+  + +L ++  RG   N  ++ +L+ G+     
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            + A DL+  MI  G  P+ +  + L++G C N  ++EA+ +   ++ +    +   Y+ 
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I G  K   +  A  ++  +  +G  P+V  Y  M+   C  +    A+ L  KM    
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             P+  T+NT I+G    G +D +++L+ +M+ 
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 197/444 (44%), Gaps = 44/444 (9%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRF----SMINP----------------- 86
           +A+ +F ++ E GL P V  +N +++ L  E R     +++N                  
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 87  --------------IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
                         + S M+   ++P+V  Y+ ++  LCK+     A  L  EM  KG A
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           P+  +Y  ++   C  G+  +A+ L            V  +NALI+   KE K+ EA  L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM+ R I P+ +TY+++I   C     + +      MF    +P++ +F +++  Y  
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR 444

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             R  E   L   + R G + N   Y+TLIHG C   +++ A  +  +M  +   P+  T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            + L+ GF +   L  A +++  +  +    + VAY  ++  +C+ +   +A  L   + 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                P+  T+N  I G CG   +  A  L  +MK     P+ +TYN L+ G L+   + 
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 428 EAFELVTEIEKCGIQLNIVTYNTI 451
           ++ EL++E+   G   +  T   +
Sbjct: 625 KSIELISEMRSNGFSGDAFTIKMV 648



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 169/342 (49%), Gaps = 9/342 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +       QYL  +M  +G++ +   +  +I+ +   G    A ++   + E  
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++ A + E +      +   M    + P+  TYN ++   CK+NR D A 
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +   M     +PD V++ TI+   C+  +V+E     RE++ R   +  + YN LI+G 
Sbjct: 422 HMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +  A  L  EM+  G+ P+ IT + ++   C+   +E +L +   + +   + + 
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G   G +  EA DL+  +   G  P+V  Y+ +I G C   ++ +A  + ++
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           M++N   P+ +TY+ LI G  KAG +  + ++ + M SNG S
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 70/324 (21%)

Query: 276 LIHGLCS---NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           LIHG  +     S+     V+++ EE         + +L D          A   ++ M+
Sbjct: 49  LIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDD----------AIDFFDYMV 98

Query: 333 SNGCSPNVVAYTC--MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
            +   P   A  C  ++ V  + N    A SL  KM     P N  +FN  IK  C C +
Sbjct: 99  RS--RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           + +++               +T+ +L                     K G Q ++VT+NT
Sbjct: 157 LSFSL---------------STFGKL--------------------TKLGFQPDVVTFNT 181

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDA----------------ITFNIIIYAYCKQG 494
           +LHG+C    + EA  L G M +E   L+A                ITFN +I   C +G
Sbjct: 182 LLHGLCLEDRISEALALFGYM-VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           +V  A  L++++ G G  + D+++Y +++ G+C  G  + A   L KM    I P+   +
Sbjct: 241 RVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 555 NVLVRSLFSNLGHLGPVYILDDIM 578
           + ++  L  +  H    Y+  +++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEML 323



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 7/152 (4%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           EKL E  E      L + +++  +      +  +I+   +    ++A  +F  +   G++
Sbjct: 516 EKLEEALE------LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V+ YN ++     ++  S  N ++  MK +G EP+  TYN L++   K   +D + +L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           + EM + G + DA +   +V+ +   G+++++
Sbjct: 630 ISEMRSNGFSGDAFT-IKMVADLITDGRLDKS 660


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 256/507 (50%), Gaps = 45/507 (8%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV-EMGNKGCAPDAVSYTTIVSSI 145
           ++  + + G   N   +N LLK LC   R+D A  +L+  M   GC P+ VSY T+V   
Sbjct: 217 VFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGF 276

Query: 146 CKLGQVEEAREL--AMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           C   + EEA EL   M    G+S       YN +ING  +E ++++A+ L  +M+DRGI 
Sbjct: 277 CNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIP 336

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+V+TY+T+I  LC    V+ +  +  QM  +G  P+  ++  L+ GYL  G+  E   L
Sbjct: 337 PDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRL 396

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGS---------------------MDEAVSVSYQM 296
              M      P+   Y+ L+  LC NG                      +DEAV +  +M
Sbjct: 397 LEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKM 456

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +    PNV  Y ALID   K G +  A   +N+MI+             V  LC    +
Sbjct: 457 RQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE------------VYGLCTVEKW 504

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L+ +M  +    + V FNT +  LC  GRV  A +L++ M +    P++ +YN L
Sbjct: 505 EKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTL 564

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DG     R  EA +L+  +   G++ N  TYNT+LHG C+A  + +A+ LL +ML+ G 
Sbjct: 565 VDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP 624

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
             D +T+N I++   + G+ + A +L L+ I    +W  D+ +Y  +L G+C +  + EA
Sbjct: 625 TPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQW--DMYTYNIILNGLCKNNCVDEA 682

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLF 562
           F   Q + ++G+  +  T+N+++ +L 
Sbjct: 683 FKMFQSLCSKGLQLHIITFNIMIGALL 709



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 251/507 (49%), Gaps = 34/507 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L  QM   G+      + +VI+   +  + ++A  +F ++ + G+KP+   YN
Sbjct: 319 QVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYN 378

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR-------------- 115
            ++   L+  ++  +  +   M    +EP+ F Y +LL  LCKN R              
Sbjct: 379 CLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRK 438

Query: 116 -------VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVY 168
                  +D A  +  +M  +G +P+ V+Y  ++ ++CKLG+V++A          +  +
Sbjct: 439 GIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA----------ILKF 488

Query: 169 NALIN---GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           N +IN   GLC   K E+A  L+ EM+D+GI  +V+ ++T++  LC  G V  +  ++  
Sbjct: 489 NQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIEL 548

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   G  P++ S+ +L+ G+ L GRT EA+ L + M+  G  PN   Y+TL+HG C    
Sbjct: 549 MLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARR 608

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D+A S+  +M  N   P+V TY+ ++ G  + G    A +++  MI++    ++  Y  
Sbjct: 609 IDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNI 668

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+NN   +A  + + +  +    + +TFN  I  L   G+ + AM L   +  Y 
Sbjct: 669 ILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYG 728

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +P++ TY  + + L++   ++E   L + +E+ G   N    N ++      G +  A 
Sbjct: 729 LVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAG 788

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCK 492
             L K+  +   L+A T +++I  Y +
Sbjct: 789 AYLSKLDEKNFSLEASTASMLISLYSR 815



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/560 (26%), Positives = 263/560 (46%), Gaps = 56/560 (10%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDAL-LAENRFSMINP-----IYSNMKR---DGM 96
           +  ALK+F  +       +V  +NH+L A+  A  R S +       ++  M R   D +
Sbjct: 132 SHDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKV 191

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P+  TY+IL+   C+  R++  + +   +   G   + + +  ++  +C   +++EA  
Sbjct: 192 APDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATN 251

Query: 157 LAM----RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVD-RGID--PNVITYSTII 207
           + +     FG    V  YN L+ G C E++ EEA  LL  M D +G+   P+V++Y+T+I
Sbjct: 252 ILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVI 311

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +     G V+ +  +  QM  RG  P++ ++ +++ G         A  ++ +M+ +G  
Sbjct: 312 NGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVK 371

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+   Y+ LIHG  S G   E V +  +M  +   P+   Y+ L+D   K G    A  I
Sbjct: 372 PSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNI 431

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ +I  G  P+               M  +A  + +KM  +   PN V +   I  LC 
Sbjct: 432 FDSVIRKGIKPDA--------------MIDEAVCIFDKMRQQGLSPNVVNYGALIDALCK 477

Query: 388 CGRVDWAMKLLDQMKQ------------------YECLP-----NITTYNELLDGLLRVN 424
            GRVD A+   +QM                    +E L      ++  +N L+  L R  
Sbjct: 478 LGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREG 537

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           RV EA  L+  + + G++ ++++YNT++ G C  G   EA +LL  M+  G K +  T+N
Sbjct: 538 RVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYN 597

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +++ YCK  ++++A  LL  +   G   PD+++Y ++L G+  +G   EA      M+N
Sbjct: 598 TLLHGYCKARRIDDAYSLLREMLMNGP-TPDVVTYNTILHGLFQTGRFSEAKELYLNMIN 656

Query: 545 EGICPNFATWNVLVRSLFSN 564
                +  T+N+++  L  N
Sbjct: 657 SRTQWDMYTYNIILNGLCKN 676



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 233/509 (45%), Gaps = 36/509 (7%)

Query: 24  EGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           +G+SC   V  + +VIN + R G  ++A  +F ++ + G+ P V  YN ++D L      
Sbjct: 296 QGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVV 355

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
                ++  M   G++P+  TYN L+       +     +LL EM      PD   Y  +
Sbjct: 356 DRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALL 415

Query: 142 VSSICKLGQVEEARELAMRFGSGVSVYNALI-NGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +  +CK G+  EAR          ++++++I  G+  +  I+EA  +  +M  +G+ PNV
Sbjct: 416 LDYLCKNGRCTEAR----------NIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNV 465

Query: 201 ITYSTIISSLCDVGNVETSL-----------------------GILGQMFVRGCNPNIHS 237
           + Y  +I +LC +G V+ ++                        ++ +M  +G   ++  
Sbjct: 466 VNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVV 525

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F +L+      GR  EA  L   M+R G  P+V++Y+TL+ G C  G  DEA  +   M 
Sbjct: 526 FNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMV 585

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                PN  TY+ L+ G+ KA  +  A  +   M+ NG +P+VV Y  ++  L Q   F 
Sbjct: 586 SIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFS 645

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  L   M       +  T+N  + GLC    VD A K+   +       +I T+N ++
Sbjct: 646 EAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMI 705

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             LL+  + ++A +L   I   G+  ++ TY  I   + + G + E   L   M   GT 
Sbjct: 706 GALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTA 765

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            ++   N ++  +  +G ++ A   L ++
Sbjct: 766 PNSRMLNALVRRFLHRGDISRAGAYLSKL 794



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 175/409 (42%), Gaps = 66/409 (16%)

Query: 28  CSEG--VFISVINS-YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-- 82
           C+E   +F SVI    +   + ++A+ +F ++R+ GL P V  Y  ++DAL    R    
Sbjct: 425 CTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDA 484

Query: 83  ------MINPIYS---------------NMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
                 MIN +Y                 M   G+  +V  +N L+  LC+  RV  A +
Sbjct: 485 ILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQR 544

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLC 176
           L+  M   G  PD +SY T+V   C  G+ +EA +L     ++        YN L++G C
Sbjct: 545 LIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYC 604

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTI------------------------------ 206
           K  +I++A+ LL EM+  G  P+V+TY+TI                              
Sbjct: 605 KARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMY 664

Query: 207 -----ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
                ++ LC    V+ +  +   +  +G   +I +F  ++   L GG+  +A DL+  +
Sbjct: 665 TYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI 724

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              G +P+V  Y  +   L   GS++E   +   MEEN   PN    +AL+  F   G++
Sbjct: 725 SAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDI 784

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
             A    +++     S      + ++ +  +      A SL EK  F +
Sbjct: 785 SRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSLPEKYRFPH 833


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/538 (28%), Positives = 269/538 (50%), Gaps = 28/538 (5%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++  +I+      L E+A+    R+R     P V  Y  +L   L + +      I S M
Sbjct: 44  LYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMM 103

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             +G  P+   +N L+ A C++     AYKLL +M   GC P  V Y  ++  IC   + 
Sbjct: 104 ITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEP 163

Query: 152 -EEARELAMR-----FGSGVSVYNALING----LCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            ++  +LA +       +GV +    I+     LC   K E+A+ ++ EM+ +G  P+  
Sbjct: 164 GKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTS 223

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TYS +I  LC+   VE +  +  +M   G  P+++ +T+L+  +   G   +A + ++ M
Sbjct: 224 TYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            R+G  PNVV Y+ LIH    +  + +A  V   M    C PN+ TY+ALIDG  KAG +
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343

Query: 322 LGASQIWNRM---------------ISNGCS--PNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             ASQI+  M               + +G S  PNV  Y  +V  LC+     +A  L++
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M+ E C PN V ++  I G C  G++D A ++   M +    PN+ TY+ L+D L +  
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R+  A ++++++ +     N+V Y  ++ G+C+ G   EA++L+  M  +G   + +T+ 
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
            +I  + K G+V   ++LL ++   G   P+ ++Y  L+   C++G + EA   L++M
Sbjct: 524 AMIDGFGKSGRVEKCLELLQQMSSKG-CAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 257/527 (48%), Gaps = 36/527 (6%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P   +Y  ++  L   + F       + M+     PNV TY ILL       ++    ++
Sbjct: 40  PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRI 99

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCK 177
           L  M  +GC P    + ++V + C+ G    A +L  +        G  VYN LI G+C 
Sbjct: 100 LSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS 159

Query: 178 EHK--------IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
             +         E+A+    EM++ G+  N +  S     LC +G  E +  ++ +M  +
Sbjct: 160 SEEPGKDVLDLAEKAYG---EMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSK 216

Query: 230 GCNPNIHSFTSLLKGYLL-GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           G  P+  +++ ++ GYL    +  +A  L+  M R G  P+V  Y+TLI   C  G +++
Sbjct: 217 GFIPDTSTYSKVI-GYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQ 275

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A +   +ME + C PNV TY+ALI  + K+  +  A++++  M+S GC+PN+V YT ++ 
Sbjct: 276 ARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALID 335

Query: 349 VLCQNNMFHQAHSLIEKMAFENCP-----------------PNTVTFNTFIKGLCGCGRV 391
            LC+     +A  + + M  EN                   PN  T+   + GLC   +V
Sbjct: 336 GLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQV 395

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  LL  M    C PN   Y+ L+DG  +  ++ EA E+ T + +CG   N+ TY+++
Sbjct: 396 KEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSL 455

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +  + +   +  A ++L KML      + + +  +I   CK GK + A +L+  +   G 
Sbjct: 456 IDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKG- 514

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            NP++++YT+++ G   SG +++    LQ+M ++G  PNF T+ VL+
Sbjct: 515 CNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 245/514 (47%), Gaps = 26/514 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M  +G       +  VI         E+A ++F  ++  G+ P V +Y  ++D+  
Sbjct: 209 VIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFC 268

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M+RDG  PNV TY  L+ A  K+ +V  A ++   M +KGC P+ V
Sbjct: 269 KAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIV 328

Query: 137 SYTTIVSSICKLGQVEEARE----------------LAMRFGSGVS------VYNALING 174
           +YT ++  +CK G++E+A +                +  R   G S       Y AL++G
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDG 388

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK ++++EA  LL  M   G +PN + Y  +I   C  G ++ +  +   M   G +PN
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++++SL+       R   A  + ++M+     PNVV Y+ +I GLC  G  DEA  +  
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV 508

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            MEE  C PNV TY+A+IDGF K+G +    ++  +M S GC+PN V Y  ++   C   
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +AH L+E+M     P +   +   I+G         ++ L  ++ + + +P    Y 
Sbjct: 569 LLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSVPVAPVYR 626

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
            L+D  ++  R++ A EL  E+         N   + T++  +  A    +AF+L   M+
Sbjct: 627 VLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMI 686

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
             G+  +      +I    +  +   A+QLLD I
Sbjct: 687 SRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 220/515 (42%), Gaps = 61/515 (11%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--FGSGVSVYNALINGLCKEHKIEE 183
           M   G   D  +      S+CK G+  EA  L  +  F     +Y  +I+GLC+    EE
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEE 60

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A   L  M      PNV+TY  ++    +   +     IL  M   GC P+   F SL+ 
Sbjct: 61  AMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVH 120

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN-------------------- 283
            Y   G    A  L  +M++ G  P  V Y+ LI G+CS+                    
Sbjct: 121 AYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLE 180

Query: 284 --------------------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
                               G  ++A +V  +M      P+ +TYS +I     A  +  
Sbjct: 181 AGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEK 240

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A Q++  M  NG +P+V  YT ++   C+     QA +  ++M  + C PN VT+   I 
Sbjct: 241 AFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIH 300

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
                 +V  A ++ + M    C PNI TY  L+DGL +  ++++A ++   ++K  +++
Sbjct: 301 AYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEI 360

Query: 444 -----------------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
                            N+ TY  ++ G+C+A  V EA  LL  M +EG + + + ++ +
Sbjct: 361 PDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDAL 420

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I   CK GK++ A ++   +   G ++P++ +Y+SL+  +     +  A   L KML   
Sbjct: 421 IDGCCKAGKLDEAQEVFTTMLECG-YDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS 479

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             PN   +  ++  L   +G     Y L  +M  K
Sbjct: 480 CAPNVVIYTEMIDGL-CKVGKTDEAYKLMVMMEEK 513


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/502 (28%), Positives = 273/502 (54%), Gaps = 8/502 (1%)

Query: 53  FYRIREFGLKPTVKIYNHILDALLA--ENRFSMINPIYSNMKRDGMEPNVFTYNILLKAL 110
           F+R+      P++  +N IL +++    N ++    +   ++  G+ P + T+NIL+   
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGV 165
           C    +  A+ +  ++   G  P  +++ T+++ IC  G+++EA       +A+ F    
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y  LINGLCK  +   A  +L ++  + ++ +V+ Y+ II+SLC    V  +  +  +
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +  +P++ +F SL+ G+ + G+  EA  L++ M+ +   P+V  +S L+  LC +G+
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +  A ++   M +    P+V TYS+L+DG+     +  A  +++ M   G +P+  +Y  
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           M+  L +  M  +A SL ++M  +   P+TVT+N+ I GLC  GR+ +A +L+D+M    
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
              +I TYN L+D L + + + +A  LV +I+  GIQ ++ TYN ++ G+C+ G +  A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            +   +LI+G  ++A T+NI+I   CK+G  N A  LL ++   G   PD ++Y +++  
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGII-PDAVTYETIIRA 523

Query: 526 ICNSGGMQEAFIYLQKMLNEGI 547
           +      ++A   L++M+  G+
Sbjct: 524 LFRKDENEKAEKLLREMIIRGL 545



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 247/467 (52%), Gaps = 7/467 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+ + +++   G+ PT+  +N +++        +    I++ + + G  P   T+N L+ 
Sbjct: 78  AISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLIN 137

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GS 163
            +C N ++  A      +   G   D VSY T+++ +CK+G+   A ++  +       +
Sbjct: 138 GICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNT 197

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            V +YN +IN LCK+  + +A+ L  EM+ + I P+V+T++++I   C VG ++ + G+ 
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M ++  NP++++F+ L+      G    A ++   M+++G +P+VV YS+L+ G C  
Sbjct: 258 HEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLV 317

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +++A  V   M      P+  +Y+ +I+G  K   +  A  ++  M   G +P+ V Y
Sbjct: 318 NEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTY 377

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+      A  L+++M     P + +T+N+ I  LC    +D A+ L+ ++K 
Sbjct: 378 NSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKD 437

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P++ TYN L+DGL +  R+K A ++  ++   G  +N  TYN +++G+C+ G+  E
Sbjct: 438 QGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNE 497

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR--IRG 508
           A  LL KM   G   DA+T+  II A  ++ +   A +LL    IRG
Sbjct: 498 AEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 262/522 (50%), Gaps = 11/522 (2%)

Query: 51  KMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPI--YSNMKRDGMEPNVFTYNILL 107
           +  Y    F + P    + H L   + + N F + N +  +  M R    P++  +N +L
Sbjct: 5   RFIYYSNNFLIPPFRASFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKIL 64

Query: 108 KALCK--NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMR 160
            ++ K  NN    A  L  ++  KG  P  V++  +V+  C LG++  A     + L + 
Sbjct: 65  GSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLG 124

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           +      +N LING+C   K++EA      ++  G   + ++Y T+I+ LC +G    +L
Sbjct: 125 YHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAAL 184

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L ++  +  N ++  +  ++          +A  L++ MI +   P+VV +++LI G 
Sbjct: 185 QMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGF 244

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G + EA  + ++M   +  P+V T+S L+D   K GN+  A  +   M+  G  P+V
Sbjct: 245 CVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDV 304

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y+ ++   C  N  ++A  +   M+     P+  ++N  I GL     VD A+ L  +
Sbjct: 305 VTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKE 364

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M      P+  TYN L+DGL ++ R+  A++LV E+   GI  +I+TYN+++  +C+   
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A  L+ K+  +G +    T+NI+I   CK G++ NA  +   +   G ++ +  +Y 
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG-YSVNAWTYN 483

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++ G+C  G   EA + L KM N GI P+  T+  ++R+LF
Sbjct: 484 IMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALF 525



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 247/466 (53%), Gaps = 9/466 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  Q++++G++ +   F  ++N Y  +G    A  +F +I + G  PT   +N +++ + 
Sbjct: 81  LSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGIC 140

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +       + ++   G   +  +Y  L+  LCK      A ++L ++  K    D V
Sbjct: 141 LNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVV 200

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I++S+CK   V +A +L       R    V  +N+LI G C   +++EAF L  EM
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEM 260

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V + I+P+V T+S ++ +LC  GN+  +  +L  M  +G  P++ +++SL+ GY L    
Sbjct: 261 VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEV 320

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A  +++ M R G  P+  +Y+ +I+GL     +DEA+S+  +M      P+  TY++L
Sbjct: 321 NKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSL 380

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +  A Q+ + M +NG   +++ Y  ++ VLC+N+   +A +L++K+  +  
Sbjct: 381 IDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI 440

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNITTYNELLDGLLRVNRVKEA 429
            P+  T+N  I GLC  GR+  A  +   +  K Y    N  TYN +++GL +     EA
Sbjct: 441 QPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSV--NAWTYNIMINGLCKEGLFNEA 498

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
             L++++E  GI  + VTY TI+  + R     +A +LL +M+I G
Sbjct: 499 EVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 191/412 (46%), Gaps = 38/412 (9%)

Query: 155 RELAMRFGSGVSVYNALINGLCK--EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           R L MR    +  +N ++  + K   +    A  L  ++  +GI P ++T++ +++  C 
Sbjct: 47  RMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCH 106

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G +  +  I  ++   G +P   +F +L+ G  L G+  EA    + +I  GF  + V+
Sbjct: 107 LGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVS 166

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y TLI+GLC  G    A+ +  ++E      +V  Y+ +I+   K   +  A Q+++ MI
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           +   SP+VV +  ++   C      +A  L  +M  +N  P+  TF+  +  LC  G + 
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  +L  M +   +P++ TY+ L+DG   VN V +A  + + + + G+  +  +YN ++
Sbjct: 287 RAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G+ +  MV EA  L  +M  +G                                     
Sbjct: 347 NGLGKIKMVDEALSLFKEMCCKGIA----------------------------------- 371

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            PD ++Y SL+ G+C  G +  A+  + +M N GI  +  T+N L+  L  N
Sbjct: 372 -PDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKN 422



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 169/334 (50%), Gaps = 6/334 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K   D  Q L  +M  + +S     F S+I  +  VG  ++A  +F+ +    + P V 
Sbjct: 212 DKAVSDAYQ-LYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVY 270

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            ++ ++DAL  +   +    + + M + G+ P+V TY+ L+   C  N V+ A  +   M
Sbjct: 271 TFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTM 330

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKI 181
              G AP A SY  +++ + K+  V+EA  L               YN+LI+GLCK  +I
Sbjct: 331 SRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRI 390

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
             A+ L+ EM + GI  +++TY+++I  LC   +++ ++ ++ ++  +G  P+++++  L
Sbjct: 391 SYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNIL 450

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G   GGR   A D++  ++ +G+  N   Y+ +I+GLC  G  +EA  +  +ME N  
Sbjct: 451 IDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGI 510

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            P+  TY  +I    +      A ++   MI  G
Sbjct: 511 IPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 30/230 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  LG+   +D    L ++M  +G++     + S+I+   ++G    A ++   +   G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   +  YN ++D L   +       +   +K  G++P+++TYNIL+  LCK  R+  A 
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  ++  KG + +A +Y  +++ +CK G   EA                          
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAE------------------------- 499

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
                 LL +M + GI P+ +TY TII +L      E +  +L +M +RG
Sbjct: 500 -----VLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/607 (28%), Positives = 278/607 (45%), Gaps = 68/607 (11%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISV----INSYRRVGLAEQALKMFYRIREFG 60
           LG +  +D    LLQ+ +   +     +  +V    ++S  R G A  A+ MF R+   G
Sbjct: 78  LGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPA-LAVSMFNRMARAG 136

Query: 61  LK---PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            K   P +  +  ++         ++       + + G+     T+  LL+ LC   R  
Sbjct: 137 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTS 196

Query: 118 GAYKL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-------GVSVYN 169
            A  + L  M   GC PD  SYTT++  +C   + EEA EL              V  Y 
Sbjct: 197 DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYT 256

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            +I+G  KE  + +A+ L C+M+D GI PNV+T +++I  LC V  ++ +  +L QM   
Sbjct: 257 TVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDE 316

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
              PN  ++ SL+ GYL  G+  EA  +   M R+G  PNVV YS LI  LC +G   EA
Sbjct: 317 HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEA 376

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG-------------------------- 323
             +   M ++   PN +TY +L+ G+A  GNL+                           
Sbjct: 377 REIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYA 436

Query: 324 ---------ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
                    AS  +N+M   G  P++VAYT ++  LC+      A S   +M  +   P+
Sbjct: 437 YCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPD 496

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            +TFNT I G    G+ + A +L  +M      PN+ T+N ++D L +  +V EA +L  
Sbjct: 497 IITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFD 556

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            + + G + N+V+YNT++HG   AG V E  +LL  ML+ G K  A+TFN ++      G
Sbjct: 557 LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMG 616

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
                              PD+++  +L+   C  G +++     ++ML +    +  T 
Sbjct: 617 -----------------LKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITE 659

Query: 555 NVLVRSL 561
           N+ +R +
Sbjct: 660 NIKLRGV 666



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 259/543 (47%), Gaps = 20/543 (3%)

Query: 40  YRRVGLA-EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN-------PIYSNM 91
           YR   L  E AL +F  + +     ++   N +L  +      S +         +++ M
Sbjct: 73  YRSGDLGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRM 132

Query: 92  KRDGME---PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
            R G +   P++ T+ IL+   C    ++  +  L ++   G    AV++T ++ ++C  
Sbjct: 133 ARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAE 192

Query: 149 GQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID--PNV 200
            +  +A  + +R          V  Y  L+ GLC E K EEA  L+  M + G +  PNV
Sbjct: 193 KRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNV 252

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++Y+T+I      G+V  +  +  +M   G  PN+ +  S++ G        +A  +  +
Sbjct: 253 VSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQ 312

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           MI E  +PN   Y++LIHG  S+G   EAV +  +M  +   PNV TYS LID   K+G 
Sbjct: 313 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGL 372

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A +I+N MI +G  PN   Y  ++            +++ + M      P    FN 
Sbjct: 373 HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNI 432

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I   C CGR+D A    ++M+Q   +P+I  Y  ++DGL ++ R+ +A     ++   G
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  +I+T+NT++HG    G   +A +L  +M+  G   +  TFN +I    K+GKV  A 
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L D +   G   P+++SY +++ G   +G + E    L  ML  G+ P   T+N L+  
Sbjct: 553 KLFDLMPRAGA-KPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG 611

Query: 561 LFS 563
           + S
Sbjct: 612 MVS 614



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 193/406 (47%), Gaps = 32/406 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  + +LQQM  E +  +   + S+I+ Y   G   +A+++   +   G +P V  Y+ 
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC-KNNRVD--GAYKLLVEMG 127
           ++D L      +    I+++M + G +PN  TY  LL     + N VD      L+V+ G
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIE 182
            +   P    +   + + CK G+++EA     +     F   +  Y  +I+GLCK  +++
Sbjct: 423 MR---PGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLD 479

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A    C+M+D G+ P++IT++T+I      G  E +  +  +M  RG  PN+++F S++
Sbjct: 480 DAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMI 539

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                 G+  EA  L++ M R G  PNVV+Y+T+IHG    G + E + +   M      
Sbjct: 540 DKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLK 599

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P   T++ L+DG                M+S G  P+VV    ++   C++       +L
Sbjct: 600 PTAVTFNTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTL 643

Query: 363 IEKMAFENCPPNTVTFNTFIKGLC-----GCGRVDWAMKLLDQMKQ 403
             +M  +    +T+T N  ++G+       C  V  ++K L+ + Q
Sbjct: 644 FREMLGKADKTDTITENIKLRGVTVKASYHCSSVVISLKALEVVTQ 689



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 7/225 (3%)

Query: 359 AHSLIEKMA---FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           A S+  +MA    +   P+  TF   I   C  G ++     L Q+ +        T+  
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184

Query: 416 LLDGLLRVNRVKEAFELV-TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           LL  L    R  +A  +V   + + G   ++ +Y T+L G+C      EA +L+  M  +
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244

Query: 475 GTKL--DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           G     + +++  +I+ + K+G V  A  L  ++   G   P++++  S++ G+C    M
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHG-IPPNVVTCNSVIDGLCKVQAM 303

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
            +A   LQ+M++E I PN  T+N L+    S+      V IL ++
Sbjct: 304 DKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEM 348



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 11/202 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D       QM  +G+S     F ++I+ +   G  E+A ++FY + + G
Sbjct: 468 VIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRG 527

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++D L  E + +    ++  M R G +PNV +YN ++        V    
Sbjct: 528 IPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 587

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLL +M   G  P AV++ T++  +  +G               V     LI+  C++ +
Sbjct: 588 KLLDDMLLIGLKPTAVTFNTLLDGMVSMG-----------LKPDVVTCKTLIDSCCEDGR 636

Query: 181 IEEAFWLLCEMVDRGIDPNVIT 202
           IE+   L  EM+ +    + IT
Sbjct: 637 IEDILTLFREMLGKADKTDTIT 658


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 263/523 (50%), Gaps = 28/523 (5%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A+    R+R     P V+ Y  +L   L + +      I S M  +G  P+   +N L
Sbjct: 325 EEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSL 384

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV---------EEAREL 157
           + A CK++    AYKLL +M    C P  V Y  ++ SIC  G++         E+A   
Sbjct: 385 VHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNE 444

Query: 158 AMRFGSGVSVYN--ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            +  G+ ++  N  +    LC   K E+A+ ++ EM+  G  P+  TYS +I  LC+   
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASR 504

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           VE +  +  +M   G  P+++++T L+  +   G   +A +  + M+R+G  P VV Y+T
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM---- 331
           LIH       +  A  +   M    C PNV TY+ALIDG+ K+GN+  A QI+ RM    
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 332 ----------ISNGCS--PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
                     I N  +  PNVV Y  +V  LC+ +    A  L+E M  + C PNT+ ++
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I G C   ++D A ++  +M ++   PN+ TY+ L+D L +  R+    ++++++ + 
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
               NIV Y  ++ G+ +     EA++L+  M  +G K + +T+  +I  + K GKV+  
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKC 804

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           ++L  R  G     P+ ++YT L+   C +G + EA+  L++M
Sbjct: 805 LELF-REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 257/537 (47%), Gaps = 37/537 (6%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E+A K+ + +   G  P    Y+ ++  L   +R      ++  MK  G+ P+V+TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFG 162
            IL+    K   +  A+  L EM   GC P  V+YTT++ +  K  +V  A EL  +   
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 163 SG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRG------ID------------PNV 200
            G    V  Y ALI+G CK   IE+A  +   M  RG      +D            PNV
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARM--RGDADIPDVDMYFKIKNNVAEKPNV 645

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY  ++  LC    V+ +  +L  MFV GC PN   + +L+ G+    +  EA +++++
Sbjct: 646 VTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHK 705

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G+ PNV  YS+LI  L  +  +D  + V  +M ENSC PN+  Y+ +IDG +K   
Sbjct: 706 MVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A ++   M   GC PNVV YT M+    +     +   L  +M  + C PN VT+  
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I   C  G +D A  LL++MKQ     ++++Y ++++G  R      +  L+ E+EK G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNG 883

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT--FNIIIYAYCKQGKVNN 498
               I+ Y  ++    +AG +  A +L  +++     + A    +  +IY++    K+ +
Sbjct: 884 SAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGH 943

Query: 499 AIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           A +L  D IR G    PD+ ++  LL G+      +EA       L++ +C     W
Sbjct: 944 AFELFYDMIRDG--VIPDLGTFVHLLMGLIRVRRWEEAL-----QLSDSLCQMDINW 993



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 162/615 (26%), Positives = 276/615 (44%), Gaps = 61/615 (9%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++   + +L  M  EG   S  +F S++++Y +      A K+  ++ +   KP   +
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415

Query: 68  YNHILDALLAENR------FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           YN ++ ++ +         F +    Y+ M   G   N        + LC   + + AYK
Sbjct: 416 YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYK 475

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGLC 176
           ++ EM   G  PD  +Y+ ++  +C   +VE A  L     G+G    V  Y  LI+   
Sbjct: 476 VIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K   I++A   L EMV  G +P V+TY+T+I +      V  +  +   M  +GC PN+ 
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI 595

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFL----------------PNVVAYSTLIHGL 280
           ++T+L+ GY   G   +A  ++ RM  +  +                PNVV Y  L+ GL
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGL 655

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    + +A  +   M  + C PN   Y ALIDGF KA  L  A +++++M+ +G +PNV
Sbjct: 656 CKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNV 715

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y+ ++  L ++        ++ KM   +C PN V +   I GL    + D A KL+  
Sbjct: 716 YTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM 775

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++  C PN+ TY  ++DG  +  +V +  EL  E+   G   N VTY  +++  C  G 
Sbjct: 776 MEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH 835

Query: 461 VVEAFQLLGKM--------------LIEGTKLDAI-------------------TFNIII 487
           + EA+ LL +M              +IEG K + I                    + ++I
Sbjct: 836 LDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLI 895

Query: 488 YAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
             + K G++  A++L    I            YTSL++    +  +  AF     M+ +G
Sbjct: 896 DNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDG 955

Query: 547 ICPNFATWNVLVRSL 561
           + P+  T+  L+  L
Sbjct: 956 VIPDLGTFVHLLMGL 970



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 273/633 (43%), Gaps = 108/633 (17%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R GL   AL+   R+++FG KPT   YN ++   L  ++      ++  M   G+  + F
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA------- 154
           T     +ALCK  +   A  L+     +   P+ + Y  ++S +C+    EEA       
Sbjct: 278 TLGFFAQALCKVGKWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 155 -----------------------------RELAMRFGSG----VSVYNALINGLCKEHKI 181
                                        R L+M    G     +++N+L++  CK    
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV------ETSLGILGQMFVRGC---N 232
             A+ LL +M      P  + Y+ +I S+C  G +      E +     +M   G     
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N+ SF   L G+   G+  +A  + + M+  GF+P+   YS +I  LC+   ++ A  +
Sbjct: 455 VNVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M+     P+V TY+ LID F+KAG +  A    + M+ +GC P VV YT ++    +
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL----- 407
                 A+ L E M  + C PN +T+   I G C  G ++ A ++  +M+    +     
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631

Query: 408 -----------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
                      PN+ TY  L+DGL + ++VK+A +L+  +   G + N + Y+ ++ G C
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITF------------------------------NII 486
           +A  + EA ++  KM+  G   +  T+                              NI+
Sbjct: 692 KAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 487 IYA-----YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           IY        K  K + A +L+  +   G   P++++YT+++ G   +G + +     ++
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKG-CKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           M ++G  PNF T+ VL+    +  GHL   Y L
Sbjct: 811 MGSKGCAPNFVTYTVLINHCCAT-GHLDEAYAL 842



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 240/529 (45%), Gaps = 31/529 (5%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R+ G   T  +Y  +LD     +   +       ++ D  E      N+L++  C+N   
Sbjct: 163 RQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLW 222

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNA-- 170
           + A + L  + + G  P  ++Y  +V    +  +++ A    RE++   G  +  +    
Sbjct: 223 NVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS-ELGLSMDEFTLGF 281

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
               LCK  K  EA  L+ E  D    PN I Y+ +IS LC+    E ++  L +M    
Sbjct: 282 FAQALCKVGKWREALSLI-EKED--FVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN+ ++  LL G L   +      + + MI EG  P+   +++L+H  C +     A 
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG------ASQIWNRMISNGCSPNVVAYT 344
            +  +ME+  C P    Y+ LI      G L G      A + +N M+S G   N V   
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVV 458

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
              + LC    F +A+ +I +M      P+T T++  I  LC   RV+ A  L  +MK  
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             +P++ TY  L+D   +   +K+A   + E+ + G +  +VTY T++H   +A  V  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE------------- 511
            +L   M+ +G   + IT+  +I  YCK G +  A Q+  R+RG  +             
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNN 638

Query: 512 --WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
               P++++Y +L+ G+C +  +++A   L+ M  +G  PN   ++ L+
Sbjct: 639 VAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALI 687



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 157/338 (46%), Gaps = 9/338 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   + LL+ M V+G   +  V+ ++I+ + +    ++A ++F+++ E G
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHG 710

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ ++D L  + R  ++  + S M  +   PN+  Y  ++  L K  + D AY
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL++ M  KGC P+ V+YT ++    K G+V++  EL    GS         Y  LIN  
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    ++EA+ LL EM       +V +Y  +I           SLG+L ++   G  P I
Sbjct: 831 CATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPII 888

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIRE--GFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
             +  L+  ++  GR   A +L   +I            Y++LI+       +  A  + 
Sbjct: 889 LLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELF 948

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           Y M  +   P++ T+  L+ G  +      A Q+ + +
Sbjct: 949 YDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 292/562 (51%), Gaps = 5/562 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE + +K +      LL++M+ +G    E +F  VI    + G   +A+K+   +   G
Sbjct: 265 VIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCG 324

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V +   ++     +        ++  M  +G+ PN  TY ++++  CKN  +D AY
Sbjct: 325 KPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAY 384

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG-SGVSVYNALINGLC 176
           ++  +M NK  +P   +  +++    K    EEA +L   A+  G + V  YN+L++ LC
Sbjct: 385 EIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLC 444

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE K+ EA  +  +MV +G+ P+V++Y+ +I   C  G+++++ G+  +M  +G  PN+ 
Sbjct: 445 KEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLI 504

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +++ L+ GY   G T  A  L++RM  E   P+    + +I+GLC  G   E+     ++
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +    P   TY+ +IDGF K G++  A  ++  M   G SPNV  YT ++   C++N  
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  ++++M  +    +   +   I G C  G +  A +LL ++++    PN   Y+ +
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  ++  ++ A  L   +   GI  ++  Y T++ G+ + G ++ A +L  +ML +G 
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D IT++++I+  C +G++ NA ++L+ +       P +  Y +L+ G    G +QEAF
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC-MTPTVFIYNTLITGHFKEGNLQEAF 803

Query: 537 IYLQKMLNEGICPNFATWNVLV 558
               +ML++G+ P+  T+++LV
Sbjct: 804 RLHNEMLDKGLVPDDTTYDILV 825



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 281/589 (47%), Gaps = 42/589 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L++  +         VF  ++NSY +      A+  F  + E  + P + + N  L 
Sbjct: 138 VARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLS 197

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L+  N       +Y+ M   G++ +  T +++++A  +  +++ A     E  NKG   
Sbjct: 198 ELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVEL 257

Query: 134 DAVSYTTIVSSICK-------LGQVEEARE---------------LAMRFGS-------- 163
           DA +Y+ ++ ++CK       LG + E R+               + M+ G         
Sbjct: 258 DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVK 317

Query: 164 ----------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                      V V   L+ G CK+  ++ A  L  +M + GI PN +TY+ II   C  
Sbjct: 318 GEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKN 377

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           GN++ +  I  QM  +  +P + +  SL++GYL      EAS L++  +  G + NV  Y
Sbjct: 378 GNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG-IANVFTY 436

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++L+  LC  G M EA S+  +M      P+V +Y+ +I G  + G++  A+ ++  M+ 
Sbjct: 437 NSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLE 496

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  PN++ Y+ ++    +      A  L ++M  EN  P+  T N  I GLC  GR   
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSE 556

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           +   L ++ Q   +P   TYN ++DG ++   V  A  + TE+ K G+  N+ TY  +++
Sbjct: 557 SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLIN 616

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C++  +  A +++ +M  +G +LD   +  +I  +C++G + NA QLL  ++  G  +
Sbjct: 617 GFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG-LS 675

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           P+ + Y+S++ G      M+ A    ++M+NEGI  +   +  L+  L 
Sbjct: 676 PNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLL 724



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 229/496 (46%), Gaps = 19/496 (3%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG-AYKLLVE 125
           + NH  D   A + F+     +++ KR G+  +V    +LL  L K+    G A  LL  
Sbjct: 71  LLNHQNDPQSALSYFT-----WASQKR-GLIKSVDALCVLLHILTKSTETCGKARNLLNR 124

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             +    P        V S+     +E +R L   F S   V+N L+N   K  +I +A 
Sbjct: 125 FASDDWGP--------VPSVVVARLIESSRRL--DFESDSRVFNYLLNSYVKTKRINDAV 174

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
                ++++ I P +   +  +S L     +  +  +  +M  +G   +  + + +++  
Sbjct: 175 DCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRAS 234

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G+  EA   +     +G   +  AYS +I  +C       A+ +  +M +    P+ 
Sbjct: 235 MREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHE 294

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             ++ +I    K G +L A ++   M+S G   NVV  T ++K  C+      A  L +K
Sbjct: 295 VIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDK 354

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      PN VT+   I+  C  G +D A ++ +QMK  +  P +   N L+ G L+   
Sbjct: 355 MNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARS 414

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            +EA +L  E   CGI  N+ TYN++L  +C+ G + EA  +  KM+ +G +   +++N 
Sbjct: 415 PEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNN 473

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  +C+QG +++A  +   +   G   P++I+Y+ L+ G    G  + AF    +M  E
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKG-LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGE 532

Query: 546 GICPNFATWNVLVRSL 561
            I P+  T N+++  L
Sbjct: 533 NIAPSDFTCNIIINGL 548



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 158/315 (50%), Gaps = 6/315 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+ E ++ S+     +IN   + G   ++     ++ + G  PT   YN I+D  +
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   +    +Y+ M + G+ PNVFTY  L+   CK+N +D A K++ EM NKG   D  
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y  ++   C+ G +  A +L       G+S    VY+++I+G  K   +E A  L   M
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++ GI  ++  Y+T+IS L   G +  +  +  +M  +G  P++ +++ L+ G    G+ 
Sbjct: 705 INEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQL 764

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +   M R+   P V  Y+TLI G    G++ EA  +  +M +    P+ TTY  L
Sbjct: 765 ENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDIL 824

Query: 312 IDGFAKAGNLL-GAS 325
           ++G  K GNL  GAS
Sbjct: 825 VNGKVKDGNLFSGAS 839



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 71/151 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI    +   ++   +L ++M  EG+ C   ++ ++I+   + G    A +++  +   G
Sbjct: 684 MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG 743

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  Y+ ++  L  + +      I  +M R  M P VF YN L+    K   +  A+
Sbjct: 744 IMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAF 803

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +L  EM +KG  PD  +Y  +V+   K G +
Sbjct: 804 RLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 243/460 (52%), Gaps = 9/460 (1%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG- 164
           L+ L +N  ++   + L  M NKG +PD ++ T ++   CK+G+ + A + + +   SG 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 165 ---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V+ YN LI+G CK  +IEEA  +L  M   G+ PN  TY  ++ SLCD G ++ ++ 
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +LG+     C P++ + T L+          +A  L+N M  +G  P+VV Y+ LI G C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA+    ++    C P+V +++ ++      G  + A ++   M+  GC P+VV
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++  LCQ  +  +A +++E M      PN+ +FN  I+G C    +D A++ L+ M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               C P+I TYN LL  L +  +V +A  +++++   G   ++++YNT++ G+ + G  
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A +LL +M  +G K D IT   ++    ++GKV  A++    ++      P+   Y S
Sbjct: 443 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA-IRPNAFIYNS 501

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G+C S     A  +L  M+ +G  P  AT+  L++ +
Sbjct: 502 IITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGI 541



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 249/496 (50%), Gaps = 11/496 (2%)

Query: 35  SVINSYRRV---GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           S I   RR+   G  E+  +    +   G  P V     ++       R    + I   +
Sbjct: 81  SEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGIL 140

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +  G   +V +YN+L+   CK+  ++ A ++L  MG    +P+A +Y  ++ S+C  G++
Sbjct: 141 EESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMG---VSPNAATYDAVLCSLCDRGKL 197

Query: 152 EEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A     R+L  +    V     LI+  CKE  + +A  L  EM ++G  P+V+TY+ +
Sbjct: 198 KQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVL 257

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C  G ++ ++  L ++   GC P++ S   +L+    GGR  +A  L   M+R+G 
Sbjct: 258 IKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGC 317

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+VV ++ LI+ LC  G + +A++V   M ++   PN  +++ LI GF     +  A +
Sbjct: 318 LPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIE 377

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
               M+S GC P++V Y  ++  LC++     A  ++ +++ + C P+ +++NT I GL 
Sbjct: 378 YLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLL 437

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+ + A++LL++M      P++ T   ++ GL R  +V+EA +    +++  I+ N  
Sbjct: 438 KVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAF 497

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            YN+I+ G+C++     A   L  M+ +G K    T+  +I     +G   +A +L + +
Sbjct: 498 IYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557

Query: 507 RGGGEWNPDIISYTSL 522
              G     ++   SL
Sbjct: 558 YSRGLVKRSLVEKVSL 573



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 200/433 (46%), Gaps = 30/433 (6%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C+   ++  L+ +   GVS +   + +V+ S    G  +QA+++  R  +    P V   
Sbjct: 160 CKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTC 219

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++DA   E+       +++ M+  G +P+V TYN+L+K  CK  R+D A + L ++ +
Sbjct: 220 TVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS 279

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
            GC PD +S+  I+ S+C  G+  +A +                              LL
Sbjct: 280 YGCQPDVISHNMILRSLCSGGRWMDAMK------------------------------LL 309

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M+ +G  P+V+T++ +I+ LC  G +  +L +L  M   G  PN  SF  L++G+  G
Sbjct: 310 ATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNG 369

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
                A +    M+  G  P++V Y+ L+  LC +G +D+AV +  Q+    C P++ +Y
Sbjct: 370 KGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISY 429

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + +IDG  K G    A ++   M   G  P+++  T +V  L +     +A      +  
Sbjct: 430 NTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKR 489

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               PN   +N+ I GLC   +   A+  L  M    C P   TY  L+ G+      ++
Sbjct: 490 FAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAED 549

Query: 429 AFELVTEIEKCGI 441
           A +L  E+   G+
Sbjct: 550 ASKLSNELYSRGL 562



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 145/287 (50%), Gaps = 4/287 (1%)

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           L  NG ++E       M      P+V   +ALI  F K G    ASQI   +  +G   +
Sbjct: 89  LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V +Y  ++   C++    +A  ++++M      PN  T++  +  LC  G++  AM++L 
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRMGVS---PNAATYDAVLCSLCDRGKLKQAMQVLG 205

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +  Q +C P++ T   L+D   + + V +A +L  E+   G + ++VTYN ++ G C+ G
Sbjct: 206 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA + L K+   G + D I+ N+I+ + C  G+  +A++LL  +   G   P ++++
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCL-PSVVTF 324

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
             L+  +C  G + +A   L+ M   G  PN  ++N L++   +  G
Sbjct: 325 NILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 80/163 (49%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    +L Q+  +G S S   + +VI+   +VG AE A+++   +   GLKP +    
Sbjct: 406 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 465

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E +       +  +KR  + PN F YN ++  LCK+ +   A   L +M  K
Sbjct: 466 SVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAK 525

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALI 172
           GC P   +YTT++  I   G  E+A +L+    S   V  +L+
Sbjct: 526 GCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLV 568



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 5/165 (3%)

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L  L+R   ++E    +  +   G   +++    ++   C+ G    A Q++G +   G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            +D  ++N++I  YCK G++  A+++LDR+      +P+  +Y ++L  +C+ G +++A 
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAM 201

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             L + L     P+  T  VL+ +     G +G    L + M NK
Sbjct: 202 QVLGRQLQSKCYPDVVTCTVLIDATCKESG-VGQAMKLFNEMRNK 245


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 261/522 (50%), Gaps = 10/522 (1%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRDGM 96
           +S+R +   + AL  F  +      P +  +  +L A++   ++   +  +   M+  G+
Sbjct: 70  SSFRNI---DDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGL 126

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
            P+++T +IL+       RVD A+ +  +M   G  PDAV++ T+++ +CK+G+  +A E
Sbjct: 127 SPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVE 186

Query: 157 LAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
               F  SG    V  Y  +INGLCK  +   A  L  +M + G  PNV+TY+ +I SLC
Sbjct: 187 FFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLC 246

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               V  +L I   M  +  +P+I ++ SL++G     R  EAS L N M     +PN+ 
Sbjct: 247 KDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIF 306

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++ L+  +C  G + EA  V   M E    P+V TYS+L+ G++    ++ A ++++ M
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           I+ GC P+  +Y  ++K  C+     +A  L  +M  +   P+ V +NT I GLC  GR+
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL 426

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  L   M     LP++ TY+ LLDG  +   + +AF L   ++   ++ +I  YN +
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNIL 486

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +  +C+ G + +A +L  ++ ++G   +   +  II   CK+G ++ A++    + G G 
Sbjct: 487 IDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG- 545

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             PD  SY  ++ G         A   + +M + G      T
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 226/471 (47%), Gaps = 5/471 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM++ G+S        +I+ +  +   + A  +F ++ + GL+P    +N +++ L 
Sbjct: 117 LSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLC 176

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +F+     + + +  G +P V+TY  ++  LCK      A  L  +M   GC P+ V
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVV 236

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++ S+CK   V EA ++     A R    +  YN+LI GLC   + +EA  LL EM
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               I PN+ T++ ++ ++C  G V  + G+   M   G  P++ +++SL+ GY L    
Sbjct: 297 TSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEI 356

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L++ MI +G  P+  +Y+ LI G C    +DEA  +  +M      P+   Y+ L
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTL 416

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G  + G L  A  ++  M SNG  P++  Y+ ++   C+     +A  L   M     
Sbjct: 417 IHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYL 476

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   +N  I  +C  G +  A KL  ++     LPN+  Y  +++ L +   + EA E
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
               +E  G   +  +YN I+ G  +      A QL+G+M   G   +A T
Sbjct: 537 AFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 225/455 (49%), Gaps = 13/455 (2%)

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ-------VEEARELAMRFGSGVSVY 168
           +D A      M ++   P  + +T ++S+I K+GQ       + +  ELA   G    +Y
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELA---GLSPDIY 131

Query: 169 --NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
             + LI+      +++ AF +  +M+  G+ P+ +T++T+I+ LC VG    ++      
Sbjct: 132 TLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF 191

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              GC P ++++T+++ G    G T  A+ L+ +M   G  PNVV Y+ LI  LC +  +
Sbjct: 192 EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLV 251

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA+ +   M+     P++ TY++LI G         AS + N M S    PN+  +  +
Sbjct: 252 NEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVL 311

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           V  +C+     +A  + + M      P+ VT+++ + G      +  A KL D M    C
Sbjct: 312 VDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGC 371

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+  +YN L+ G  +  R+ EA +L  E+   G+  + V YNT++HG+C+ G + EA  
Sbjct: 372 KPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD 431

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L   M   G   D  T+++++  +CK+G +  A +L  R+       PDI  Y  L+  +
Sbjct: 432 LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF-RVMQSTYLKPDIAMYNILIDAM 490

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C  G +++A     ++  +G+ PN   +  ++ +L
Sbjct: 491 CKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNL 525



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 170/355 (47%), Gaps = 3/355 (0%)

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS-DLWNRMIREGFLPNVVAY 273
           N++ +L     M  R   P I  FT LL   +  G+ + A   L  +M   G  P++   
Sbjct: 74  NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTL 133

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S LI        +D A SV  +M +    P+  T++ LI+G  K G    A + ++   +
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEA 193

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +GC P V  YT ++  LC+      A  L +KM    C PN VT+N  I  LC    V+ 
Sbjct: 194 SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNE 253

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ +   MK     P+I TYN L+ GL    R KEA  L+ E+    I  NI T+N ++ 
Sbjct: 254 ALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVD 313

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +C+ G V EA  +   M   G + D +T++ ++Y Y  + ++  A +L D +   G   
Sbjct: 314 AICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKG-CK 372

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           PD  SY  L+ G C +  + EA     +M+++G+ P+   +N L+  L   LG L
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGL-CQLGRL 426



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYR-RVGLAEQALKMFYRIREF 59
           +++ + ++ ++   Q + + M   GV      + S++  Y  R+ + E A K+F  +   
Sbjct: 311 LVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE-ARKLFDAMITK 369

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G KP    YN ++       R      +++ M   G+ P+   YN L+  LC+  R+  A
Sbjct: 370 GCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREA 429

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             L   M + G  PD  +Y+ ++   CK G + +A  L     +      +++YN LI+ 
Sbjct: 430 QDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDA 489

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +CK   +++A  L  E+  +G+ PNV  Y+TII++LC  G ++ +L     M   GC P+
Sbjct: 490 MCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPD 549

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             S+  +++G+L       A+ L   M   GF+
Sbjct: 550 EFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 54/104 (51%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I++  + G  + A K+F  +   GL P V+IY  I++ L  E         + NM+ DG
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
             P+ F+YN++++   +      A +L+ EM ++G   +A + T
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 283/556 (50%), Gaps = 16/556 (2%)

Query: 35   SVINSY---RRVGLAEQALKMF----YRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
            S+I+S+    ++ + E  ++ F    Y  +++G  P  ++++     L+          +
Sbjct: 563  SLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDP--RVFDVFFQVLVEFGMLPEARKV 620

Query: 88   YSNMKRDGMEPNVFTYNILLKALCKN-NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            +  M   G+  +V + N+ L  L K+ N+   A  +  E    G   +  SY  ++  +C
Sbjct: 621  FEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVC 680

Query: 147  KLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            +LG++ EA  L +      +   V  Y+ +ING C+  ++++ + L+ +M  +G+ PN  
Sbjct: 681  QLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSY 740

Query: 202  TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            TY +II  LC +  +  +     +M  +G  P+   +T+L+ G+   G    AS  +  M
Sbjct: 741  TYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM 800

Query: 262  IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
                  P+V+ Y+ +I G C  G M EA  + ++M      P++ T++ L++G+ KAG++
Sbjct: 801  HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHI 860

Query: 322  LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
              A ++ N MI  GCSPNVV YT ++  LC+      A+ L+ +M      PN  T+N+ 
Sbjct: 861  KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 920

Query: 382  IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
            + GLC  G ++ A+KL+ + +      +  TY  L+D   +   + +A E++TE+   G+
Sbjct: 921  VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGL 980

Query: 442  QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            Q  IVT+N +++G C  GM+ +  +LL  ML +G   +A TFN ++  YC +  +  A  
Sbjct: 981  QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATA 1040

Query: 502  LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +   +   G   PD  +Y +L+ G CN+  M+EA+   Q+M  +G   + +T++VL++  
Sbjct: 1041 IYKDMCSRGV-EPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099

Query: 562  FSNLGHLGPVYILDDI 577
            F     +    I D +
Sbjct: 1100 FKRKKFVEAREIFDQM 1115



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 244/467 (52%), Gaps = 5/467 (1%)

Query: 49   ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
            A+ +F    E G+   V  YN ++  +    R +  + +   M+  G  P+V +Y+ ++ 
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 109  ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV-- 165
              C+   +D  +KL+ +M  KG  P++ +Y +I+  +C++ ++ EA E  +   G G+  
Sbjct: 713  GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772

Query: 166  --SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               VY  L++G CK   I  A     EM  R I P+V+TY+ IIS  C +G++  +  + 
Sbjct: 773  DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832

Query: 224  GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             +M  RG  P+I +FT L+ GY   G   +A  + N MI+ G  PNVV Y+TLI GLC  
Sbjct: 833  HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892

Query: 284  GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            G +D A  + ++M +    PN+ TY+++++G  K+GN+  A ++     + G + + V Y
Sbjct: 893  GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952

Query: 344  TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            T ++   C++    +A  ++ +M  +   P  VTFN  + G C  G ++   KLL+ M  
Sbjct: 953  TTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1012

Query: 404  YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
                PN TT+N L+      N +K A  +  ++   G++ +  TY  ++ G C A  + E
Sbjct: 1013 KGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKE 1072

Query: 464  AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            A+ L  +M  +G  +   T++++I  + K+ K   A ++ D++R  G
Sbjct: 1073 AWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 231/476 (48%), Gaps = 5/476 (1%)

Query: 36   VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            VI+   ++G   +A  +   +   G  P V  Y+ +++          +  +   MK+ G
Sbjct: 675  VIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKG 734

Query: 96   MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            ++PN +TY  ++  LC+  ++  A +   EM  +G  PD + YTT+V   CK G +  A 
Sbjct: 735  LKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAAS 794

Query: 156  ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            +      S      V  Y A+I+G C+   + EA  L  EM+ RG++P++IT++ +++  
Sbjct: 795  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGY 854

Query: 211  CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
            C  G+++ +  +   M   GC+PN+ ++T+L+ G    G    A++L + M + G  PN+
Sbjct: 855  CKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 914

Query: 271  VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
              Y+++++GLC +G+++EAV +  + E      +  TY+ L+D + K+G +  A +I   
Sbjct: 915  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTE 974

Query: 331  MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
            M+  G  P +V +  ++   C + M      L+  M  +   PN  TFN  +K  C    
Sbjct: 975  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034

Query: 391  VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            +  A  +   M      P+  TY  L+ G      +KEA+ L  E++  G  +++ TY+ 
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094

Query: 451  ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            ++ G  +    VEA ++  +M  +G   D   F+       K  + +  +  +D I
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1150



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 214/436 (49%), Gaps = 5/436 (1%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            I+   +LL  M+++G +     + +VIN Y R G  ++  K+  ++++ GLKP    Y  
Sbjct: 685  INEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGS 744

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            I+  L    + +     +S M   G+ P+   Y  L+   CK   +  A K   EM ++ 
Sbjct: 745  IIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRD 804

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
              PD ++YT I+S  C++G + EA +L            +  +  L+NG CK   I++AF
Sbjct: 805  ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAF 864

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             +   M+  G  PNV+TY+T+I  LC  G+++++  +L +M+  G  PNI ++ S++ G 
Sbjct: 865  RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 924

Query: 246  LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               G   EA  L       G   + V Y+TL+   C +G MD+A  +  +M      P +
Sbjct: 925  CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTI 984

Query: 306  TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             T++ L++GF   G L    ++ N M++ G +PN   + C+VK  C  N    A ++ + 
Sbjct: 985  VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKD 1044

Query: 366  MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
            M      P+  T+   +KG C    +  A  L  +MK      +++TY+ L+ G  +  +
Sbjct: 1045 MCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKK 1104

Query: 426  VKEAFELVTEIEKCGI 441
              EA E+  ++ + G+
Sbjct: 1105 FVEAREIFDQMRRDGL 1120



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 206/432 (47%), Gaps = 5/432 (1%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            E+D V  L+++MK +G+  +   + S+I    R+    +A + F  +   G+ P   +Y 
Sbjct: 719  ELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYT 778

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++D           +  +  M    + P+V TY  ++   C+   +  A KL  EM  +
Sbjct: 779  TLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCR 838

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
            G  PD +++T +++  CK G +++A  +            V  Y  LI+GLCKE  ++ A
Sbjct: 839  GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              LL EM   G+ PN+ TY++I++ LC  GN+E ++ ++G+    G N +  ++T+L+  
Sbjct: 899  NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 958

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            Y   G   +A ++   M+ +G  P +V ++ L++G C +G +++   +   M      PN
Sbjct: 959  YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1018

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TT++ L+  +    NL  A+ I+  M S G  P+   Y  +VK  C      +A  L +
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQ 1078

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +M  +    +  T++  IKG     +   A ++ DQM++     +   ++   D   +  
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138

Query: 425  RVKEAFELVTEI 436
            R     + + EI
Sbjct: 1139 RPDTIVDPIDEI 1150



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 186/398 (46%), Gaps = 5/398 (1%)

Query: 9    CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
            C++   +    +M  +G+     V+ ++++ + + G    A K FY +    + P V  Y
Sbjct: 753  CKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 812

Query: 69   NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
              I+              ++  M   G+EP++ T+  L+   CK   +  A+++   M  
Sbjct: 813  TAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ 872

Query: 129  KGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEE 183
             GC+P+ V+YTT++  +CK G ++ A EL      +     +  YN+++NGLCK   IEE
Sbjct: 873  AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932

Query: 184  AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
            A  L+ E    G++ + +TY+T++ + C  G ++ +  IL +M  +G  P I +F  L+ 
Sbjct: 933  AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992

Query: 244  GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            G+ L G   +   L N M+ +G  PN   ++ L+   C   ++  A ++   M      P
Sbjct: 993  GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEP 1052

Query: 304  NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            +  TY  L+ G   A N+  A  ++  M   G S +V  Y+ ++K   +   F +A  + 
Sbjct: 1053 DGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIF 1112

Query: 364  EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            ++M  +    +   F+ F        R D  +  +D++
Sbjct: 1113 DQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1150



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +++   ++ +I        +M    ++     + ++I+ + ++G   +A K+F+ +   G
Sbjct: 780  LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            L+P +  +  +++             ++++M + G  PNV TY  L+  LCK   +D A 
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            +LL EM   G  P+  +Y +IV+ +CK G +EEA +L   F +         Y  L++  
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            CK  ++++A  +L EM+ +G+ P ++T++ +++  C  G +E    +L  M  +G  PN 
Sbjct: 960  CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +F  L+K Y +      A+ ++  M   G  P+   Y  L+ G C+  +M EA  +  +
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQE 1079

Query: 296  MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            M+      +V+TYS LI GF K    + A +I+++M  +G + +
Sbjct: 1080 MKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD 1123


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 257/511 (50%), Gaps = 25/511 (4%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N ++   +  NR  +   +Y  M+   +  N++++NIL+K  C  +++  +     ++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAR------------ELAMRFGSGVSV--------Y 168
            G  PD V++ T++  +C   ++ EA             E    F   V +        +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LINGLC E ++ EA  L+ +MV +G+  +V+TY TI++ +C +G+ +++L +L +M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
               P++  +++++      G   +A  L++ M+ +G  PNV  Y+ +I G CS G   +
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +   M E    P+V T++ALI    K G L  A ++ + M+     P+ V Y  M+ 
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C++N F  A  + + MA     P+ VTFNT I   C   RVD  M+LL ++ +   + 
Sbjct: 410 GFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N TTYN L+ G   V+ +  A +L  E+   G+  + +T N +L+G C    + EA +L 
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             + +    LD + +NIII+  CK  KV+ A  L   +   G   PD+ +Y  ++ G C 
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMISGFCG 584

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              + +A +   KM + G  P+ +T+N L+R
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 240/482 (49%), Gaps = 24/482 (4%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFS--------MIN-------PIYSNMKR 93
           +L  F ++ + G +P V  +N +L  L  E+R S        M+         ++  M  
Sbjct: 160 SLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            G+ P V T+N L+  LC   RV  A  L+ +M  KG   D V+Y TIV+ +CK+G  + 
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279

Query: 154 ARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A  L  +         V +Y+A+I+ LCK+    +A +L  EM+++GI PNV TY+ +I 
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMID 339

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G    +  +L  M  R  NP++ +F +L+   +  G+  EA  L + M+     P
Sbjct: 340 GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFP 399

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           + V Y+++I+G C +   D+A      M +    P+V T++ +ID + +A  +    Q+ 
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLL 455

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             +   G   N   Y  ++   C+ +  + A  L ++M      P+T+T N  + G C  
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            +++ A++L + ++  +   +   YN ++ G+ + ++V EA++L   +   G++ ++ TY
Sbjct: 516 EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTY 575

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N ++ G C    + +A  L  KM   G + D  T+N +I    K G+++ +I+L+  +R 
Sbjct: 576 NVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635

Query: 509 GG 510
            G
Sbjct: 636 NG 637



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 199/411 (48%), Gaps = 20/411 (4%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N +I    + ++ + A  L  +M  R I  N+ +++ +I   CD   +  SL   G++  
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL---------------PNVVAY 273
            G  P++ +F +LL G  L  R  EA  L+  M+  GFL               P V+ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLI+GLC  G + EA ++  +M       +V TY  +++G  K G+   A  + ++M  
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               P+VV Y+ ++  LC++     A  L  +M  +   PN  T+N  I G C  GR   
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +LL  M + E  P++ T+N L+   ++  ++ EA +L  E+    I  + VTYN++++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C+     +A  +   M       D +TFN II  YC+  +V+  +QLL  I   G   
Sbjct: 410 GFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG-LV 464

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +  +Y +L+ G C    +  A    Q+M++ G+CP+  T N+L+     N
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCEN 515



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 196/392 (50%), Gaps = 11/392 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G+      + +++N   ++G  + AL +  ++ E  +KP V IY+ I+D L 
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   S    ++S M   G+ PNVFTYN ++   C   R   A +LL +M  +   PD +
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 367

Query: 137 SYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++  ++S+  K G++ EA +L         F   V+ YN++I G CK ++ ++A      
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDA----KH 422

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M D    P+V+T++TII   C    V+  + +L ++  RG   N  ++ +L+ G+     
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            + A DL+  MI  G  P+ +  + L++G C N  ++EA+ +   ++ +    +   Y+ 
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I G  K   +  A  ++  +  +G  P+V  Y  M+   C  +    A+ L  KM    
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
             P+  T+NT I+G    G +D +++L+ +M+
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 199/452 (44%), Gaps = 44/452 (9%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRF----SMINP----------------- 86
           +A+ +F ++ E GL P V  +N +++ L  E R     +++N                  
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 87  --------------IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
                         + S M+   ++P+V  Y+ ++  LCK+     A  L  EM  KG A
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           P+  +Y  ++   C  G+  +A+ L            V  +NALI+   KE K+ EA  L
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM+ R I P+ +TY+++I   C     + +      MF    +P++ +F +++  Y  
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR 444

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             R  E   L   + R G + N   Y+TLIHG C   +++ A  +  +M  +   P+  T
Sbjct: 445 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            + L+ GF +   L  A +++  +  +    + VAY  ++  +C+ +   +A  L   + 
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLP 564

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                P+  T+N  I G CG   +  A  L  +MK     P+ +TYN L+ G L+   + 
Sbjct: 565 IHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEID 624

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           ++ EL++E+   G   +  T       +CR  
Sbjct: 625 KSIELISEMRSNGFSGDAFTIKMAEEIICRVS 656



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 9/357 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +       QYL  +M  +G++ +   +  +I+ +   G    A ++   + E  
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++ A + E +      +   M    + P+  TYN ++   CK+NR D A 
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +   M     +PD V++ TI+   C+  +V+E     RE++ R   +  + YN LI+G 
Sbjct: 422 HMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +  A  L  EM+  G+ P+ IT + ++   C+   +E +L +   + +   + + 
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G   G +  EA DL+  +   G  P+V  Y+ +I G C   ++ +A  + ++
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
           M++N   P+ +TY+ LI G  KAG +  + ++ + M SNG S +        +++C+
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 70/324 (21%)

Query: 276 LIHGLCS---NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           LIHG  +     S+     V+++ EE         + +L D          A   ++ M+
Sbjct: 49  LIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDD----------AIDFFDYMV 98

Query: 333 SNGCSPNVVAYTC--MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
            +   P   A  C  ++ V  + N    A SL  KM     P N  +FN  IK  C C +
Sbjct: 99  RS--RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHK 156

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           + +++               +T+ +L                     K G Q ++VT+NT
Sbjct: 157 LSFSL---------------STFGKLT--------------------KLGFQPDVVTFNT 181

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDA----------------ITFNIIIYAYCKQG 494
           +LHG+C    + EA  L G M +E   L+A                ITFN +I   C +G
Sbjct: 182 LLHGLCLEDRISEALALFGYM-VETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           +V  A  L++++ G G  + D+++Y +++ G+C  G  + A   L KM    I P+   +
Sbjct: 241 RVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 299

Query: 555 NVLVRSLFSNLGHLGPVYILDDIM 578
           + ++  L  +  H    Y+  +++
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEML 323



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 6/211 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +G+Q LL+++   G+  +   + ++I+ +  V     A  +F  +   G+ P     N +
Sbjct: 450 EGMQ-LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L       +      ++  ++   ++ +   YNI++  +CK ++VD A+ L   +   G 
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFW 186
            PD  +Y  ++S  C    + +A  L  +          S YN LI G  K  +I+++  
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           L+ EM   G   +  T       +C V + E
Sbjct: 629 LISEMRSNGFSGDAFTIKMAEEIICRVSDEE 659



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 6/150 (4%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           EKL E  E      L + +++  +      +  +I+   +    ++A  +F  +   G++
Sbjct: 516 EKLEEALE------LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 569

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V+ YN ++     ++  S  N ++  MK +G EP+  TYN L++   K   +D + +L
Sbjct: 570 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 629

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + EM + G + DA +       IC++   E
Sbjct: 630 ISEMRSNGFSGDAFTIKMAEEIICRVSDEE 659


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 269/539 (49%), Gaps = 15/539 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           +LGE  E      L  QM+ E  V C+   + ++I  Y   G  E A K+  R+RE G  
Sbjct: 33  RLGEAEE------LFAQMEAERSVPCAYA-YNTMIMGYGSAGRFEDAYKLLERLRERGCI 85

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P+V  +N IL  L  + +      ++  MK+D  EPN  TYNI++  LC   RV+ AY++
Sbjct: 86  PSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRI 144

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVS--VYNALINGLCK 177
           L EM +    P+ ++   +V  +CK  ++EEA    E A + G       Y +LI+GL K
Sbjct: 145 LDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGK 204

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           + +++EA+ L  +M+D G + N + Y+++I +    G  E    I  ++  RGC P++  
Sbjct: 205 KGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTL 264

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
             + +      G   +   ++  +   GFLP+V +YS LIHGL   G   E  ++ + M+
Sbjct: 265 LNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMK 324

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +     +   Y+A++DGF K+G +  A +I   M      P V  Y  +V  L + +   
Sbjct: 325 QQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLD 384

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A+ L E+   +    N V +++ I G    GR+D A  +L++M +    PN+ T+N LL
Sbjct: 385 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L++   + EA      +++     N  TY+ +++G+CR     +AF     M  +G  
Sbjct: 445 DALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLV 504

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            + +T+  +I    K G + +A  L +R +  G   PD  S+ +L+ G+ N+    EA+
Sbjct: 505 PNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALIEGMSNANRAMEAY 562



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/530 (26%), Positives = 272/530 (51%), Gaps = 6/530 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A K F+ ++  GLKP    Y  ++  L    R      +++ M+ +   P  + YN ++ 
Sbjct: 2   AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS--G 164
                 R + AYKLL  +  +GC P  VS+ +I++ + K  +V+EA  L   M+  +   
Sbjct: 62  GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
            S YN +I+ LC   ++EEA+ +L EM    + PN++T + ++  LC    +E +  I  
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
               RGCNP+  ++ SL+ G    G+  EA  L+ +M+  G   N V Y++LI     +G
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
             ++   +  ++    C P++T  +  +D   KAG +     I+  + S G  P+V +Y+
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  L +     +  ++   M  +    +   +N  + G C  G+V  A ++L++MK+ 
Sbjct: 302 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P + TY  ++DGL +++R+ EA+ L  E +  GI+LN+V Y++++ G  + G + EA
Sbjct: 362 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 421

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           + +L +M+ +G   +  T+N ++ A  K  ++N A+     ++   +  P+  +Y+ L+ 
Sbjct: 422 YLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK-EMKCPPNTYTYSILIN 480

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           G+C      +AF++ Q M  +G+ PN  T+  ++  L + +G++   Y L
Sbjct: 481 GLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL-AKVGNITDAYSL 529



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 270/551 (49%), Gaps = 9/551 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
              ++K +G+   +  + S+I    + G   +A ++F ++      P    YN ++    
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  RF     +   ++  G  P+V ++N +L  L K  +VD A  L  E+  K   P++ 
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSS 123

Query: 137 SYTTIVSSICKLGQVEEA------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           +Y  I+  +C  G+VEEA       E A  F + ++V N +++ LCK  K+EEA+ +   
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV-NIMVDRLCKARKLEEAYKIFES 182

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
              RG +P+ +TY ++I  L   G V+ +  +  +M   G N N   +TSL++ + + GR
Sbjct: 183 ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 242

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +   ++  +IR G  P++   +T +  +   G +++   +   +      P+V +YS 
Sbjct: 243 KEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSI 302

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI G  KAG     S I++ M   G + +  AY  +V   C++   H+A+ ++E+M  + 
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P   T+   + GL    R+D A  L ++ K      N+  Y+ L+DG  +V R+ EA+
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 422

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++ E+ K G+  N+ T+N++L  + +A  + EA      M       +  T++I+I   
Sbjct: 423 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 482

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C+  K N A      ++  G   P++++YT+++ G+   G + +A+   ++    G  P+
Sbjct: 483 CRVQKYNKAFVFWQDMQKQG-LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPD 541

Query: 551 FATWNVLVRSL 561
            A++N L+  +
Sbjct: 542 AASFNALIEGM 552



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 136/290 (46%), Gaps = 5/290 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + + + ++  G       +  +I+   + G A +   +F+ +++ G     + YN
Sbjct: 277 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 336

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D      +      I   MK   ++P V TY  ++  L K +R+D AY L  E  +K
Sbjct: 337 AVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSK 396

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVSVY--NALINGLCKEHKIEEA 184
           G   + V Y++++    K+G+++EA    E  M+ G   +VY  N+L++ L K  +I EA
Sbjct: 397 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA 456

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                 M +    PN  TYS +I+ LC V     +      M  +G  PN+ ++T+++ G
Sbjct: 457 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 516

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
               G   +A  L+ R    G +P+  +++ LI G+ +     EA    +
Sbjct: 517 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAGW 566


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 247/503 (49%), Gaps = 18/503 (3%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L+ +K  G+      F  +I  Y ++GL ++A++ F  +R+F   P V  YN ILD L+ 
Sbjct: 114 LEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQ 173

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +N   +   +Y+ M +    PNV T++IL+  LCK+  V  A  L  EM  +G  PDA +
Sbjct: 174 KNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFT 233

Query: 138 YTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y  ++S +C+  +V++A  L  +      G      NAL+NG C   +++EAF LL    
Sbjct: 234 YCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFE 293

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G   +V  YS +I  L      E    +  +M      P+++ +T ++KG    G+  
Sbjct: 294 KDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVR 353

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L N M   G +P+ V Y+ LI G C  G + EA S+  ++  + C PNV TYS LI
Sbjct: 354 DALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILI 413

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G  + G    A +I+N M   GC P+ V +  ++  LC+     +AH L  KM     P
Sbjct: 414 SGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNP 473

Query: 373 P-------------NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
                         ++ +    ++ LC  G +  A ++L Q+      P I TYN L++G
Sbjct: 474 SLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNG 533

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             ++     A++L  E++  G+  + VTY T+++G+ R     +A+++  +M   G   D
Sbjct: 534 FCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPD 593

Query: 480 AITFNIIIYAYCKQGKVNNAIQL 502
           A  +  ++   C++ ++  A  L
Sbjct: 594 AAVYRTMMTWMCRRMELPRAFSL 616



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 246/506 (48%), Gaps = 19/506 (3%)

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           I D L+ +N   +       +K  G++ +   + +L+K   K    D A +    M +  
Sbjct: 97  ITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFD 156

Query: 131 CAPDAVSYTTIVSSICK-----LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           C PD  +Y  I+  + +     L      R + +     V+ ++ LI+GLCK   +++A 
Sbjct: 157 CTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDAL 216

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM  RGI P+  TY  +IS LC    V+ +  +  +M   G  P+  +  +LL G+
Sbjct: 217 HLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGF 276

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            +  R  EA  L     ++G++ +V  YS LI GL      ++   +  +M E++  P+V
Sbjct: 277 CMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDV 336

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             Y+ ++ G A+AG +  A ++ N M  +G  P+ V Y  ++K  C   +  +A SL  +
Sbjct: 337 YLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLE 396

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           ++  +C PN  T++  I G+C  G    A ++ ++M++  C P+  T+N L+DGL +  +
Sbjct: 397 ISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQ 456

Query: 426 VKEAFELVTEIE-------------KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +++A  L  ++E                  L+  +   ++  +C +G++ +A+++L ++ 
Sbjct: 457 LEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLA 516

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G      T+NI++  +CK G  N A +L   ++  G  +PD ++Y +L+ G+      
Sbjct: 517 DSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKG-LSPDTVTYGTLINGLLRFQRE 575

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
           ++A+    +M   G  P+ A +  ++
Sbjct: 576 EDAYKVFDQMEKNGCTPDAAVYRTMM 601



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 230/515 (44%), Gaps = 42/515 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L     +D    L  +MK  GV        +++N +  +   ++A  +     + G
Sbjct: 237 VISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDG 296

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V+ Y+ ++  L    R+  +  +Y  M  D ++P+V+ Y I++K L +  +V  A 
Sbjct: 297 YVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDAL 356

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           +LL EM   G  PD V Y  ++   C +G + EAR L +          V  Y+ LI+G+
Sbjct: 357 ELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+     +A  +  EM   G  P+ +T++++I  LC  G +E +  +  +M + G NP++
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEI-GRNPSL 475

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             F  L +G                      + +  +   ++  LC +G + +A  +  Q
Sbjct: 476 --FLRLSQG-------------------PSHVLDSASLQKMVEQLCDSGLIHKAYRILMQ 514

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + ++   P + TY+ L++GF K GN  GA +++  M   G SP+ V Y  ++  L +   
Sbjct: 515 LADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQR 574

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A+ + ++M    C P+   + T +  +C    +  A  L       + L NI +  +
Sbjct: 575 EEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLW-----LKYLRNIRSQED 629

Query: 416 ----LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
                ++G      V++A   + E++      ++  Y   L G+C+   V EA ++   +
Sbjct: 630 EAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIF--L 687

Query: 472 LIEGTKLDAITFNI---IIYAYCKQGKVNNAIQLL 503
           ++E  K+  IT      +IY   K+G ++ AI + 
Sbjct: 688 ILEEYKV-VITPPCCVKLIYFLLKEGDLDRAIDVF 721



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 200/445 (44%), Gaps = 43/445 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +    +L  +M   G+      +  VI+   R    + A ++F ++++ G
Sbjct: 202 LIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSG 261

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P     N +L+     +R      +    ++DG   +V  Y+ L++ L +  R +   
Sbjct: 262 VGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQ 321

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +M      PD   YT ++  + + G+V +A E                        
Sbjct: 322 LLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALE------------------------ 357

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 LL EM + G+ P+ + Y+ +I   CD+G +  +  +  ++    C PN+ +++ 
Sbjct: 358 ------LLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSI 411

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G T +A +++N M + G  P+ V +++LI GLC  G +++A  + Y+ME   
Sbjct: 412 LISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGR 471

Query: 301 CP---------PNVTTYSA----LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            P         P+    SA    +++    +G +  A +I  ++  +G +P +  Y  +V
Sbjct: 472 NPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILV 531

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+   F+ A+ L  +M F+   P+TVT+ T I GL    R + A K+ DQM++  C 
Sbjct: 532 NGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCT 591

Query: 408 PNITTYNELLDGLLRVNRVKEAFEL 432
           P+   Y  ++  + R   +  AF L
Sbjct: 592 PDAAVYRTMMTWMCRRMELPRAFSL 616



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 146/293 (49%), Gaps = 1/293 (0%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           A+  LI      G  D+A+     M +  C P+V TY+ ++D   +   LL A  ++ RM
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +   C PNV  ++ ++  LC++     A  L ++M      P+  T+   I GLC   RV
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A +L D+MK     P+  T N LL+G   ++RV EAF L+   EK G  L++  Y+ +
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G+ RA    +   L  KM+ +  K D   + I++    + GKV +A++LL+ +   G 
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             PD + Y  L+ G C+ G + EA     ++      PN  T+++L+  +  N
Sbjct: 368 V-PDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRN 419


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 279/573 (48%), Gaps = 12/573 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + +L  MK  GV  +   +   I  Y R    E+A  ++  +   G+   V   +
Sbjct: 219 QVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLS 278

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  + RFS    ++  M + G  PN  TY  L+ +L K  R      LL EM ++
Sbjct: 279 ALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-------SGVSVYNALINGLCKEHKIE 182
           G   D V+YT ++  + K G+ +E ++  +RF        +GV+ Y  LI+ LCK H ++
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKD-TLRFALSDNLSLNGVT-YTVLIDALCKAHNVD 396

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +L EM ++ I PNV+T+S++I+     G ++ +      M  RG NPN+ ++ +L+
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLI 456

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+        A ++++ M+ EG   N     +L++GL  NG ++EA+++      +   
Sbjct: 457 DGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLS 516

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +   Y+ LIDG  KAG++  A +    ++     P+ V Y   +  LC    F +A S+
Sbjct: 517 LDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSI 576

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M      P+  T+NT I   C  G    A+KLL +MK     PN+ TYN L+ GL  
Sbjct: 577 LTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              V++A  L+ E+   G   + +T+  +L    ++  +     +   M+  G   D   
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N ++   C  G    A  +L+ + G G   PD I++ +L+ G C S  +  AF    +M
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSG-IAPDTITFNALILGHCKSSHLDNAFATYAQM 755

Query: 543 LNEGICPNFATWNVLVRSLFS--NLGHLGPVYI 573
           L++ I PN AT+N L+  L S   +G  G V I
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 249/496 (50%), Gaps = 13/496 (2%)

Query: 72  LDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           L+ALL  + R  ++ P  + ++     P    YNILL AL  +     A  +L EM  +G
Sbjct: 76  LNALLYSHCRLRLLRPAIALLRSS--RPTTVAYNILLAALSDHAH---APAVLAEMCKRG 130

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
              D V+  T+++ +C+ GQV+ A  LA R G G+       +N LI G C+      A 
Sbjct: 131 VPFDGVTVNTLLAGLCRNGQVDAAAALADR-GGGIHALDVIGWNTLIAGYCRVGDTPAAL 189

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   M  +G+  +V+ Y+T+++  C  G V+ + G+L  M   G +PN+ ++T  +  Y
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA DL+  M+R G L +VV  S L+ GLC +G   EA ++  +M++    PN 
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNH 309

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY  LID  AKAG       +   M+S G   ++V YT ++  L +     +    +  
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              +N   N VT+   I  LC    VD A ++L +M++    PN+ T++ +++G ++   
Sbjct: 370 ALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + +A E    +++ GI  N+VTY T++ G  +      A ++   ML EG +++    + 
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDS 489

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           ++    + GK+  A+ L     G G  + D ++YT+L+ G+  +G M  AF + Q++++ 
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSG-LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 546 GICPNFATWNVLVRSL 561
            + P+   +NV +  L
Sbjct: 549 NMLPDAVVYNVFINCL 564



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/566 (26%), Positives = 268/566 (47%), Gaps = 32/566 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L +M+ + +S +   F SVIN + + GL ++A +    ++E G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  ++D             +Y +M  +G+E N F  + L+  L +N +++ A 
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +    G + D V+YTT                              LI+GL K   
Sbjct: 505 ALFKDASGSGLSLDHVNYTT------------------------------LIDGLFKAGD 534

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF    E++DR + P+ + Y+  I+ LC +G  + +  IL +M   G  P+  ++ +
Sbjct: 535 MPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNT 594

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++  +   G T +A  L + M      PN++ Y+TL+ GL   G++++A  +  +M    
Sbjct: 595 MIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG 654

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+  T+  ++   +++  L     I   M++ G   ++  Y  +++VLC + M  +A 
Sbjct: 655 FSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKAT 714

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++E+M      P+T+TFN  I G C    +D A     QM      PNI T+N LL GL
Sbjct: 715 VVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGL 774

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             V R+ EA  ++ E+EK G++ N +TY+ ++ G  +    VEA +L  +M+ +G     
Sbjct: 775 ESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKV 834

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+N +I  + K G +  A +L   ++  G  +P   +Y  L+ G        E    L+
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRG-VHPTSCTYDILVSGWSRIRNGTEVKKCLK 893

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLG 566
            M  +G  P+  T + + R+ FS  G
Sbjct: 894 DMKEKGFSPSKGTLSFICRA-FSKPG 918



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 198/422 (46%), Gaps = 11/422 (2%)

Query: 158 AMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           A+RF  +  +  NAL+   C+   +  A  LL     R   P  + Y+ ++++L D  + 
Sbjct: 65  AIRFRPADPASLNALLYSHCRLRLLRPAIALL-----RSSRPTTVAYNILLAALSDHAHA 119

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                +L +M  RG   +  +  +LL G    G+   A+ L +R      L +V+ ++TL
Sbjct: 120 P---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNTL 175

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G    A+SV+ +M     P +V  Y+ L+ GF +AG +  A  + + M   G 
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV  YT  +   C+     +A  L E M       + VT +  + GLC  GR   A  
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  +M +   +PN  TY  L+D L +  R KE   L+ E+   G+ +++VTY  ++  + 
Sbjct: 296 LFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G   E    L   L +   L+ +T+ ++I A CK   V+ A Q+L  +      +P++
Sbjct: 356 KQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK-SISPNV 414

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
           ++++S++ G    G + +A  Y + M   GI PN  T+  L+   F   G    + +  D
Sbjct: 415 VTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHD 474

Query: 577 IM 578
           ++
Sbjct: 475 ML 476



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/441 (23%), Positives = 183/441 (41%), Gaps = 40/441 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  +I+    L +     G+S     + ++I+   + G    A K    + +  
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   +YN  ++ L    +F     I + M+  G++P+  TYN ++ + C+      A 
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR------------------------- 155
           KLL EM      P+ ++Y T+V+ +   G VE+A+                         
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQAC 669

Query: 156 -------------ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                        E  M  G  + ++VYN L+  LC      +A  +L EM+  GI P+ 
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           IT++ +I   C   +++ +     QM  +  +PNI +F +LL G    GR  EA  +   
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M + G  PN + Y  L+ G     +  EA+ +  +M      P V+TY+ALI  F KAG 
Sbjct: 790 MEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A +++  M   G  P    Y  +V    +     +    ++ M  +   P+  T + 
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909

Query: 381 FIKGLCGCGRVDWAMKLLDQM 401
             +     G    A +LL  +
Sbjct: 910 ICRAFSKPGMTWQAQRLLKNL 930



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 9/239 (3%)

Query: 34  ISVINSYRRV----GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           I+V N+  +V    G+  +A  +   +   G+ P    +N ++      +        Y+
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            M    + PN+ T+N LL  L    R+  A  +L+EM   G  P+ ++Y  +V+   K  
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQS 813

Query: 150 -QVEEARELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            +VE  R      G G    VS YNALI+   K   + +A  L  +M  RG+ P   TY 
Sbjct: 814 NKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYD 873

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            ++S    + N       L  M  +G +P+  + + + + +   G T +A  L   + R
Sbjct: 874 ILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYR 932


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 287/565 (50%), Gaps = 39/565 (6%)

Query: 33  FISVINSYRRVGLAEQALKMF--YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
            I++I    + GL++ A   F  +R +     P V +YN +L++ L E++    + +Y +
Sbjct: 82  LIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLYKD 141

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P  +T N+L+  LC + R + A ++  +MG KGC P+  S+  +V   C+ G 
Sbjct: 142 MVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGL 201

Query: 151 VEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
              A EL    GS GV     +YN LI+  C+E + EEA  L+  M + G+ P+V+T+++
Sbjct: 202 SMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNS 261

Query: 206 IISSLCDVGNVETSLGILGQMFVRG----CNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            IS+LC  G +  +  I   M +        PNI +F  +L+G+   G   EA  L   M
Sbjct: 262 RISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESM 321

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            R G L  + +Y+  + GL  NG + EA     +M +    PN+ +++ ++DG  K G +
Sbjct: 322 KRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLI 381

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  I   MIS+G  P+ V Y+ ++   C      +A++++ +M    C PNT T N  
Sbjct: 382 SDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNIL 441

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI----- 436
           +  L   GR+  A KLL +M +     +  T N ++DGL +  ++ EA E+V  +     
Sbjct: 442 LHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGS 501

Query: 437 --------------------EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
                               +KC    +++TY+ I++G+C+AG + EA +   +M+ +  
Sbjct: 502 AALGNLGNSFIGLVDSSSNGKKC--LPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSL 559

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D+I ++  I+++CK GK+++A ++L  +   G  N  + +Y SL+ G+ +   + E +
Sbjct: 560 HPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG-CNKSLQTYNSLILGLGSKNQIFEIY 618

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
             L  M  +GI PN  T+N ++  L
Sbjct: 619 GLLDDMKEKGITPNICTYNNMISCL 643



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 270/524 (51%), Gaps = 32/524 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +    +  + +  +M V+G   +E  F  ++  Y R GL+ +AL++   +  FG
Sbjct: 157 LIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFG 216

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P   IYN ++ +   E R      +   M+ DG+ P+V T+N  + ALC   ++  A 
Sbjct: 217 VQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEAS 276

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSV--YNAL 171
           ++  +M          P+  ++  ++   CK G +EEA+ L     R G+ + +  YN  
Sbjct: 277 RIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIW 336

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GL +  K+ EA   L EMVD+GI+PN+ +++T++  LC  G +  +  I+G M   G 
Sbjct: 337 LLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGI 396

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+  ++++LL G    G+  +A+++ + M+R G  PN    + L+H L   G + EA  
Sbjct: 397 GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI----W-----------NRMI---- 332
           +  +M E S   +  T + +IDG  K+G L  A +I    W           N  I    
Sbjct: 457 LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516

Query: 333 --SNG--CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             SNG  C P+++ Y+ ++  LC+     +A     +M  ++  P+++ ++TFI   C  
Sbjct: 517 SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G++  A ++L  M++  C  ++ TYN L+ GL   N++ E + L+ ++++ GI  NI TY
Sbjct: 577 GKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTY 636

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           N ++  +C  G + +A  LL +ML +G   +  +F ++I A+CK
Sbjct: 637 NNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCK 680



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 163/601 (27%), Positives = 287/601 (47%), Gaps = 54/601 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   GV  ++ ++ ++I+S+ R G  E+A ++  R+RE GL P V  +N  + AL 
Sbjct: 208 LLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALC 267

Query: 77  AENRFSMINPIYSNMKRD---GM-EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           +  +    + I+ +M+ D   G+  PN+ T+N++L+  CK   ++ A  L+  M   G  
Sbjct: 268 SAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNL 327

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFW 186
            +  SY   +  + + G++ EA +LA++          +  +N +++GLCK   I +A  
Sbjct: 328 MELESYNIWLLGLVRNGKLLEA-QLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARM 386

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           ++  M+  GI P+ +TYST++   C  G V  +  IL +M  RGC+PN ++   LL    
Sbjct: 387 IMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLW 446

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM---------- 296
             GR  EA  L  +M    +  + V  + +I GLC +G +DEAV +   M          
Sbjct: 447 KEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGN 506

Query: 297 -------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
                            C P++ TYS +I+G  KAG L  A + +  M+     P+ + Y
Sbjct: 507 LGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIY 566

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +   C++     A  +++ M    C  +  T+N+ I GL    ++     LLD MK+
Sbjct: 567 DTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKE 626

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA---GM 460
               PNI TYN ++  L    R+K+A  L+ E+ + GI  NI ++  ++   C+A   G+
Sbjct: 627 KGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGV 686

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL----LDRIRGGGEWNPDI 516
           V E F++   +      L ++ FN ++      G+V+ A +L    LDR    G +    
Sbjct: 687 VKEVFEIALSICGHKEALYSLMFNELLIG----GEVSEAKELFDAALDRCFDLGNFQ--- 739

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
             Y  L+  +C    ++ A   L KM+++G   + A++  ++      LG  G  +  D+
Sbjct: 740 --YNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVI----DGLGKRGKKHDADE 793

Query: 577 I 577
           +
Sbjct: 794 L 794



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 138/561 (24%), Positives = 253/561 (45%), Gaps = 70/561 (12%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR---EFGL-KPTVKIYN 69
            + L+++M+ +G+      F S I++    G   +A ++F  ++   E GL +P +  +N
Sbjct: 240 AERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFN 299

Query: 70  HILDALLAENRFSMINPIYSNMKRDG---------------------------------- 95
            +L+    E        +  +MKR+G                                  
Sbjct: 300 LMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDK 359

Query: 96  -MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            +EPN++++N ++  LCKN  +  A  ++  M + G  PD V+Y+T++   C  G+V +A
Sbjct: 360 GIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKA 419

Query: 155 REL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             +    MR G   + Y  N L++ L KE +I EA  LL +M +R  D + +T + +I  
Sbjct: 420 NNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDG 479

Query: 210 LCDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLKGYL 246
           LC  G ++ ++ I+  M++ G                       C P++ +++ ++ G  
Sbjct: 480 LCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLC 539

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  EA   +  M+ +   P+ + Y T IH  C +G +  A  V   ME+  C  ++ 
Sbjct: 540 KAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQ 599

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY++LI G      +     + + M   G +PN+  Y  M+  LC+      A SL+++M
Sbjct: 600 TYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEM 659

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   PN  +F   IK  C        +K + ++    C      Y+ + + LL    V
Sbjct: 660 LQKGISPNISSFRLLIKAFCKASDFG-VVKEVFEIALSICGHKEALYSLMFNELLIGGEV 718

Query: 427 KEAFELV-TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            EA EL    +++C   L    YN ++  +C+  M+  A  +L KM+ +G + D  +F  
Sbjct: 719 SEAKELFDAALDRC-FDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMP 777

Query: 486 IIYAYCKQGKVNNAIQLLDRI 506
           +I    K+GK ++A +L +R+
Sbjct: 778 VIDGLGKRGKKHDADELAERM 798



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 129/515 (25%), Positives = 227/515 (44%), Gaps = 56/515 (10%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            Q  L++M  +G+  +   F +V++   + GL   A  +   +   G+ P    Y+ +L 
Sbjct: 349 AQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLH 408

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
              +  +    N I   M R G  PN +T NILL +L K  R+  A KLL +M  +    
Sbjct: 409 GCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDL 468

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF---GSG-------------------------V 165
           D V+   ++  +CK G+++EA E+       GS                          +
Sbjct: 469 DNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDL 528

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y+ +INGLCK  +++EA     EMV + + P+ I Y T I S C  G + ++  +L  
Sbjct: 529 ITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKD 588

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  RGCN ++ ++ SL+ G     +  E   L + M  +G  PN+  Y+ +I  LC  G 
Sbjct: 589 MEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGR 648

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           + +A S+  +M +    PN++++  LI  F KA +     +++   +S  C      Y+ 
Sbjct: 649 IKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI-CGHKEALYSL 707

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENC-PPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--K 402
           M   L       +A  L +  A + C       +N  I+ LC    ++ A  +L +M  K
Sbjct: 708 MFNELLIGGEVSEAKELFDA-ALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDK 766

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFEL---VTEIEKCGIQLNIVTYN---------- 449
            Y   P   ++  ++DGL +  +  +A EL   + ++   G+  N +T N          
Sbjct: 767 GYRFDP--ASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKITRNESAFNRQKRN 824

Query: 450 --------TILHGVCRAGMVVEAFQLLGKMLIEGT 476
                   TI+H    +G+ ++A + + K   +G+
Sbjct: 825 KFSGSDWQTIIHRDDGSGLALKALKRVQKGWGQGS 859



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 7/300 (2%)

Query: 271 VAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           V+   LI  L  +G  D A S   S++ +  + PP V  Y+ +++   +   +   S ++
Sbjct: 80  VSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY 139

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M+  G SP       ++  LC +  F  A  + +KM  + C PN  +F   ++G C  
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G    A++LLD M  +   PN   YN L+    R  R +EA  LV  + + G+  ++VT+
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTF 259

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEG----TKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           N+ +  +C AG ++EA ++   M I+      + +  TFN+++  +CK+G +  A  L++
Sbjct: 260 NSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVE 319

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            ++  G    ++ SY   L G+  +G + EA + L++M+++GI PN  ++N ++  L  N
Sbjct: 320 SMKRNGNL-MELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKN 378


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 271/548 (49%), Gaps = 44/548 (8%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I  Y R G  E A  +   +      P    YN +L  L +  ++     +   M
Sbjct: 160 TYNTLIAGYCRGGRLEDARLL---VASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEM 216

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R+   P+  T+ +L+ + C++  VD A  +L  M   GC P A+ Y  I+S   +LG+V
Sbjct: 217 TRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRV 276

Query: 152 EEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +EA  L   M     +  YNA++ GLC+  + E+A  L+ EMV +   P+ +T++T+IS 
Sbjct: 277 KEALHLFSCMPCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISF 336

Query: 210 LCDVGNVETSLGILGQMFVRG--------------------------------CNPNIHS 237
           LC  G V+ +L ++ QM   G                                C+PN   
Sbjct: 337 LCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMPCSPNTVC 396

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + S+LKG    G+  +   L   M+R    P+ + +  +I  LC  G +D  + V  ++ 
Sbjct: 397 YKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVP 456

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C P+V  Y++L++GFA+ G +  + +++  M    C PN V Y  ++  LC+  ++ 
Sbjct: 457 NYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVELWE 513

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  LI++M  + CPPN +TF+  I  LC  G V+ A+ + ++M+ Y C PN+  Y+ L 
Sbjct: 514 DAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIYSTLN 573

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +GL     V  A +L+  +     + + + Y++ L G+CRA +  +A +L+ +M  +   
Sbjct: 574 NGLSEKGCVDNALKLLNNM---SCKADTICYSSALKGLCRAELWEDAGELIVEMFRKDCP 630

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D +TF+III   C+QG V  A ++ D +    E  P+I+ Y+SL+ G    G +++A  
Sbjct: 631 PDEVTFSIIITNLCQQGFVEYATEVSDLML-KYECTPNIVIYSSLINGFSEHGHLEDALK 689

Query: 538 YLQKMLNE 545
            L+ M  E
Sbjct: 690 LLRSMPCE 697



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/568 (27%), Positives = 273/568 (48%), Gaps = 51/568 (8%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           ++ + R+G  + AL++   + E    P V     ++  L A  R +    +     R   
Sbjct: 68  LHHFIRLGDLDAALQLVGSMSE---PPAVVPCTLLIKKLCAAGRLADAEGVL----RASE 120

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
             +   +N L+   C+  R+  A ++L  +   G A D V+Y T+++  C+ G++E+AR 
Sbjct: 121 AADAVDHNTLVAGYCRAGRLADAERMLRSLAASGAA-DVVTYNTLIAGYCRGGRLEDARL 179

Query: 157 L--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           L  +M        YN L+ GLC   +  +A  L+ EM      P+ +T+  +I S C  G
Sbjct: 180 LVASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSG 239

Query: 215 NVETSLGILGQMFVRGCN--------------------------------PNIHSFTSLL 242
            V+ ++GIL +M   GC                                 P+I S+ ++L
Sbjct: 240 LVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKPDIFSYNAVL 299

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           KG     R  +A +L   M+R+   P+ V ++T+I  LC  G +D A+ V  QM +    
Sbjct: 300 KGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRK 359

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  TYSALI+ F++ G +  A ++   M    CSPN V Y  ++K LC++  +     L
Sbjct: 360 PDNFTYSALINAFSEQGCVEDALELLRSM---PCSPNTVCYKSVLKGLCRDGQWEDVGQL 416

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           I +M   +C P+ + F   I  LC  G VD  +++L ++  Y C P++  Y  LL+G   
Sbjct: 417 IGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAE 476

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             RV ++ +L   +     + N VTYN +L G+C+  +  +A +L+ +M+ +    + +T
Sbjct: 477 YGRVDDSLKLFKSMT---CKPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMT 533

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           F+I+I + C++G V  AI + ++++  G   P++I Y++L  G+   G +  A   L  M
Sbjct: 534 FSILISSLCQKGLVECAIDVFEKMQMYG-CTPNVIIYSTLNNGLSEKGCVDNALKLLNNM 592

Query: 543 --LNEGICPNFATWNVLVRSLFSNLGHL 568
               + IC + A   +    L+ + G L
Sbjct: 593 SCKADTICYSSALKGLCRAELWEDAGEL 620



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 188/379 (49%), Gaps = 10/379 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K  +D    ++ QM   G       + ++IN++   G  E AL++   +R   
Sbjct: 333 VISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALEL---LRSMP 389

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  +L  L  + ++  +  +   M R+   P+   + +++  LC+   VD   
Sbjct: 390 CSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGL 449

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
           ++L E+ N GC+PD V YT++++   + G+V+++ +L  +M        YN ++ GLCK 
Sbjct: 450 EVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCKPNTVTYNYVLMGLCKV 509

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              E+A  L+ EMV +   PN +T+S +ISSLC  G VE ++ +  +M + GC PN+  +
Sbjct: 510 ELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVIIY 569

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           ++L  G    G    A  L N M  +    + + YS+ + GLC     ++A  +  +M  
Sbjct: 570 STLNNGLSEKGCVDNALKLLNNMSCKA---DTICYSSALKGLCRAELWEDAGELIVEMFR 626

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
             CPP+  T+S +I    + G +  A+++ + M+   C+PN+V Y+ ++    ++     
Sbjct: 627 KDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLINGFSEHGHLED 686

Query: 359 AHSLIEKMAFENCPPNTVT 377
           A  L+  M  E  P  +VT
Sbjct: 687 ALKLLRSMPCE--PDTSVT 703


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 163/528 (30%), Positives = 258/528 (48%), Gaps = 15/528 (2%)

Query: 50   LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
            L  F  +   G+ P VK  N +L  L    R+  I  ++  M   G+EP++ TYN LL +
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 110  LCKNNRVDGAYKLLVEMGNK--GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV 165
              K  R D    LL EM  +  GC P+ V+Y  +++ + + G +EEA EL   MR     
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 166  S--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            S   YN LI GL     +++ + L  EM + GI P V+TY+ +I  L   G VE +    
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248

Query: 224  GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             +M   G  P++ ++ SLL GY   G   EA  L+  + R G  P V+ Y+ LI G C  
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308

Query: 284  GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            G ++EA  +  +M E  C PNV TY+ L+ G     +L  A + ++ M+S G  P+  AY
Sbjct: 1309 GDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAY 1368

Query: 344  TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
               +          +A  L E +  E    +TVT+N  I GLC  G +  A +L  +M  
Sbjct: 1369 NTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 1428

Query: 404  YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
                P+  TY  L+        ++EA ++   +   G+  + VT+  I+H  CR G +  
Sbjct: 1429 NGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYS 1488

Query: 464  AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI----QLLDRIRGGGEWNPDIISY 519
            A+    KML EG + + IT+N++I+A C+ G+   A     ++L+R     ++     +Y
Sbjct: 1489 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKY-----TY 1543

Query: 520  TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            T L+ G C  G  ++A  +  +M   GI P++ T   L++    ++ H
Sbjct: 1544 TLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGFDGHVHH 1591



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 237/530 (44%), Gaps = 43/530 (8%)

Query: 18   LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
             ++M   GV+        V+   R     +    +   + E G++P++  YN +LD+ L 
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 78   ENRFSMINPIYSNMKRDGME--PNVFTYNILLKALCKNNRVDGA---------------- 119
            E R   +  +   M+  G    PN  TYN+++  L +   ++ A                
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 1191

Query: 120  ------------------YKLLVEMGNKGCAPDAVSYTTIV-----SSICKLGQVEEARE 156
                              Y L +EM N+G  P  V+Y  ++     S + +  QV+ A  
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251

Query: 157  LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             AM     V  YN+L+NG CK   ++EA  L  ++   G+ P V+TY+ +I   C +G++
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311

Query: 217  ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            E +  +  +M  +GC PN+ ++T L+KG L       A + ++ M+ +G  P+  AY+T 
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTR 1371

Query: 277  IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
            I      G +  A  +   +       +  TY+ LI G  K GNL  A ++  +M+SNG 
Sbjct: 1372 ICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 1431

Query: 337  SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             P+ + YTC++   C+  +  +A  +   M  +   P+ VTF   I   C  G +  A  
Sbjct: 1432 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 1491

Query: 397  LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
               +M +    PN  TYN L+  L R+ R + A     E+ + G+  N  TY  ++ G C
Sbjct: 1492 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNC 1551

Query: 457  RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            + G   +A +   +M   G   D +T   ++  +   G V++ I+ LD +
Sbjct: 1552 KVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF--DGHVHHTIEYLDNV 1599


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 249/497 (50%), Gaps = 5/497 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D ++ LL++M  EG        + +I +Y R   +  A  +F +   F   PTV  +  
Sbjct: 11  LDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTK 70

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L+    F     +Y  + + G + + F YN+L++   ++ ++D A ++  EM  KG
Sbjct: 71  LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             PD  +Y  +V+++ K G+V+EAR      L       +  YN L++   K  +++ A 
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM  RG  P+V+TY+ ++ +LC  G V  +  +  +M   GC+P+ +++++L+ G 
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  EA  ++  M+  G   ++V Y++L+  L   G+MD    +  +M      P+ 
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            +++ ++D   KA     A +++ RM+ +GC P++++Y  ++    +     QA  ++E+
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P T T+N+ I  L   G+VD A  +L++M+   C P++ TYN L+D L +   
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            + A  L  +++  G++ + ++Y   + G+     + EA  L   M   G  +D   + I
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRI 490

Query: 486 IIYAYCKQGKVNNAIQL 502
           +I A  + G      QL
Sbjct: 491 LIRAAHRAGDTELEAQL 507



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 210/405 (51%), Gaps = 11/405 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I   G   ++D    + ++MK++G    E  +  ++N+  + G  ++A   F  + E G
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG 165

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P +  YN ++DA     +  M   +++ MKR G +P+V TYNILL ALC   RV  A 
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAAR 225

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV----YNALI 172
           KL  +M   GC+PD+ +Y+T+V+ + K G+VEEA    RE+  R   GV+V    YN+L+
Sbjct: 226 KLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR---GVAVDLVNYNSLL 282

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
             L K   ++  + L+ EM  +G  P+  +++TI+ +L      + +  +  +M   GC 
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ S+  L+  Y   G   +A  +   M+  GF+P    Y++LIH L ++G +DEA +V
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAV 402

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +ME   C P+V TY+ L+D   K G    A++++ +M   G  P+ ++Y   +  L  
Sbjct: 403 LEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAF 462

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           ++   +A  L + M    CP +   +   I+     G  +   +L
Sbjct: 463 DDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 242/487 (49%), Gaps = 11/487 (2%)

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLK---ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
           +++P+ + +K    E      N L+K   A  + N+   A+ L  +  +  C+P   ++T
Sbjct: 10  ILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFT 69

Query: 140 TIVSSICKLGQVEEARELAMRF-GSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDR 194
            ++  +   G+ E A  +  +    G  +    YN LI    +  +++ A  +  EM  +
Sbjct: 70  KLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIK 129

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G +P+  TY  ++++L   G V+ +      M  RG  PNI ++  L+  +   G+   A
Sbjct: 130 GSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMA 189

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L+  M R GF P+VV Y+ L+  LCS G +  A  + ++M  + C P+  TYS L++G
Sbjct: 190 LGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             K+G +  A +++  M+  G + ++V Y  ++  L +     +   L+++M+ +   P+
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
             +FNT +  L    + D A ++  +M +  C P++ +YN L+D   R     +A +++ 
Sbjct: 310 AFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLE 369

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + G      TYN+++H +   G V EAF +L +M   G + D +T+N ++    K+G
Sbjct: 370 EMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRG 429

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP-NFAT 553
           +   A +L  +++  G   PD +SY   + G+     + EA +  + M   G CP + A 
Sbjct: 430 ENQRAARLFQQMKDKG-VEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG-CPVDKAM 487

Query: 554 WNVLVRS 560
           + +L+R+
Sbjct: 488 YRILIRA 494



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 212/428 (49%), Gaps = 5/428 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    E +  + + +++  +G       +  +I  + R G  + A++MF  ++  G
Sbjct: 71  LIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKG 130

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    Y  +++AL    R       +  M   G+ PN+ TYN+L+ A  K  ++D A 
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
            L  EM  +G  P  V+Y  ++ ++C  G+V  AR+L  +  G G S     Y+ L+NGL
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++EEA  +  EMVDRG+  +++ Y++++++L   GN++    ++ +M  +G +P+ 
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            SF +++       +   A +++ RM+  G  P++++Y+ LI      G   +A  +  +
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P   TY++LI   A  G +  A  +   M + GC P+VV Y  ++ +L +   
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L ++M  +   P+T+++   I GL    R+D A+ L   MK   C  +   Y  
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRI 490

Query: 416 LLDGLLRV 423
           L+    R 
Sbjct: 491 LIRAAHRA 498



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 190/391 (48%), Gaps = 1/391 (0%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI    + +K  +AF L  +       P V  ++ +I  L + G  E +  +  ++  +G
Sbjct: 36  LITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C  +  ++  L++ +   G+   A +++  M  +G  P+   Y  L++ L   G + EA 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S    M E    PN+ TY+ L+D F K G L  A  ++  M   G  P+VV Y  ++  L
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C       A  L  KM  + C P++ T++T + GL   GRV+ A K+  +M       ++
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             YN LL  L +   +   ++L+ E+ + G   +  ++NTI+  + +A     A ++  +
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M+  G K D I++NI+I +Y + G    A Q+L+ +   G + P+  +Y SL+  +   G
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG-FIPETKTYNSLIHWLATDG 394

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            + EAF  L++M   G  P+  T+N L+  L
Sbjct: 395 QVDEAFAVLEEMETAGCRPDVVTYNRLMDML 425



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 152/302 (50%), Gaps = 2/302 (0%)

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           L S G +D   ++  +M     P    T   LI  + +      A  ++N+  S  CSP 
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPT 64

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V A+T ++ +L  +  F +A  + +K+  + C  +   +N  I+     G++D AM++  
Sbjct: 65  VHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFR 124

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +MK     P+  TY  L++ L +  RV+EA      + + G+  NI TYN ++    + G
Sbjct: 125 EMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVG 184

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A  L  +M   G +   +T+NI++ A C  G+V  A +L  ++ G G  +PD  +Y
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG-CSPDSYTY 243

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           ++L+ G+  SG ++EA    ++M++ G+  +   +N L+ +L +  G++  V+ L   M+
Sbjct: 244 STLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATL-AKAGNMDRVWKLMKEMS 302

Query: 580 NK 581
            K
Sbjct: 303 RK 304



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 140/315 (44%), Gaps = 5/315 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L     +   + L  +M  +G S     + +++N   + G  E+A K+F  + + G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   +  YN +L  L        +  +   M R G  P+ F++N ++ AL K N+ D A 
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           ++   M   GC PD +SY  ++ S  + G   +AR++        F      YN+LI+ L
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             + +++EAF +L EM   G  P+V+TY+ ++  L   G  + +  +  QM  +G  P+ 
Sbjct: 391 ATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDT 450

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+   + G     R  EA  L+  M   G   +   Y  LI      G  +    + ++
Sbjct: 451 LSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510

Query: 296 MEENSCPPNVTTYSA 310
            +       +T+  A
Sbjct: 511 SQFMPVESRLTSQKA 525


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 153/529 (28%), Positives = 250/529 (47%), Gaps = 87/529 (16%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           ++ G + +VFTYN  L AL K N    AY+   +M  +G  PD  +Y+ +          
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIV---------- 79

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                               + GLCK  ++++A  LL ++ + G+  NVITYS +I   C
Sbjct: 80  --------------------LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCC 119

Query: 212 DVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
               V+ +L I   M   G C P++ +F SLLKG   G R  EA  L+  M + G  PNV
Sbjct: 120 KASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNV 179

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           ++YSTL+ GLC  G +DEA  +  +M E SC P++  Y++ + G  KA  +  A     +
Sbjct: 180 ISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRK 239

Query: 331 MISNGCSPNVVAYTC-----------------MVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           M++ G   + VA++                  M++ LC++ M  +A    E+M   N PP
Sbjct: 240 MVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP 299

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMK---QYECLPNITTYNELLDGLLRVNRVKEAF 430
           +   FNT I  +C   R+   + L  +MK   ++ C PN+ TYN ++D L +  ++ EA 
Sbjct: 300 SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQ 359

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG--------------- 475
           ELV E+   G+  ++VTY+ ++ G+C+ G +  A  LL +M  EG               
Sbjct: 360 ELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL 419

Query: 476 --------------------TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
                               +  D +T+N ++   CK G+++ AI  L ++    +  PD
Sbjct: 420 SKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA-KCTPD 478

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + SYT ++  +C SG    A    Q+M+  G+ P+   ++ L+  L  N
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARN 527



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/553 (27%), Positives = 271/553 (49%), Gaps = 31/553 (5%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            QQM+  G    +  +  V+    + G  ++A ++  ++RE G+K  V  Y+ ++D    
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120

Query: 78  ENRFSMINPIYSNMKR-DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +R      I+  M    G  P+V T+N LLK LC   R+  A+ L   M   GC P+ +
Sbjct: 121 ASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVI 180

Query: 137 SYTTIVSSICKLGQVEEAREL--AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEM 191
           SY+T++  +CK G+++EA  L   M   S V     Y + + GLCK +++ EA     +M
Sbjct: 181 SYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +G   + + +ST+I  LC  G+ E +     QM    C                 G  
Sbjct: 241 VTKGSKADAVAFSTVIGILCKKGHAEEA---QNQMIEHLCR---------------SGML 282

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ---MEENSCPPNVTTY 308
            EA   +  MI     P+   ++TLIH +C +  + + V +  +   M+E  CPPN+ TY
Sbjct: 283 DEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETY 342

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + ++D   KA  L  A ++ N M + G SP+VV Y+ +V  LC+     +A  L+E+M+ 
Sbjct: 343 NIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E   P++ T  + +  L   G+VD+A+  L+ MK     P++ TYN LLDGL +  R+ E
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDE 462

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A   + ++       ++ +Y  I+  +CR+G    A  +  +M+  G   D + ++ ++ 
Sbjct: 463 AITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLD 522

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
              + G  + A++LL          PD + +  ++ G+C +G  ++A   +++M + G  
Sbjct: 523 GLARNGLEDLALELLKT----SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFP 578

Query: 549 PNFATWNVLVRSL 561
            +  T+  +VR L
Sbjct: 579 ADAFTYINVVRGL 591



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/603 (26%), Positives = 267/603 (44%), Gaps = 129/603 (21%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           G +  V    R +G     +++F  + R+ G + +V  YN  LDAL   N   +    + 
Sbjct: 3   GRYTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQ 62

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            M+R G  P+ FTY+I+L+ LCK   +D A +LL ++   G   + ++Y+ ++   CK  
Sbjct: 63  QMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKAS 122

Query: 150 QVEEAREL--AMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           +V++A E+   M  G G    V  +N+L+ GLC   ++ EAF L   M   G +PNVI+Y
Sbjct: 123 RVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISY 182

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           ST++  LC  G ++ +  +  +M  + C P++ ++TS + G     R  EA D   +M+ 
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 264 EGFLPNVVAYST-----------------LIHGLCSNGSMDEAVSVSYQM---------- 296
           +G   + VA+ST                 +I  LC +G +DEA     +M          
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302

Query: 297 ----------------------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
                                       +E  CPPN+ TY+ ++D   KA  L  A ++ 
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT------------- 375
           N M + G SP+VV Y+ +V  LC+     +A  L+E+M+ E   P++             
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 376 ----------------------VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                                 VT+NT + GLC  GR+D A+  L +M   +C P++ +Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV------------------ 455
             ++  L R  +   A  +  E+ K G+  + V Y+++L G+                  
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLC 542

Query: 456 --------------CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
                         C+AG   +A +++ +M   G   DA T+  ++    K GKV+ A Q
Sbjct: 543 KPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQ 602

Query: 502 LLD 504
           L+D
Sbjct: 603 LVD 605



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 200/448 (44%), Gaps = 63/448 (14%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A  +F  + + G +P V  Y+ +LD L    R      ++  M      P++  Y   +
Sbjct: 162 EAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFV 221

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV-----------------SSICKLGQ 150
             LCK NRV  A     +M  KG   DAV+++T++                   +C+ G 
Sbjct: 222 TGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGM 281

Query: 151 VEEA---------------REL----------AMRFGSGV------------------SV 167
           ++EA                EL          + R   GV                    
Sbjct: 282 LDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLET 341

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN +++ LCK  +++EA  L+ EM + G+ P+V+TYS ++  LC +G ++ +  +L +M 
Sbjct: 342 YNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS 401

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +  S+L      G+   A      M   G  P++V Y+TL+ GLC  G +D
Sbjct: 402 KEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRID 461

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA++   +M    C P+V +Y+ +I    ++G   GA  I+  M+  G  P+ V Y  ++
Sbjct: 462 EAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             L +N +   A   +E +    C P+ V     + GLC  G+ + A +++++M      
Sbjct: 522 DGLARNGLEDLA---LELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFP 578

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTE 435
            +  TY  ++ GL ++ +V +A +LV +
Sbjct: 579 ADAFTYINVVRGLRKLGKVDKARQLVDD 606



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 104/176 (59%), Gaps = 5/176 (2%)

Query: 389 GRVDWAMKLLD---QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           G++   ++L D   + K Y+   ++ TYN  LD L + N  + A+E   ++++ G   + 
Sbjct: 16  GKISTIVRLFDWLGRQKGYQ--HSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDD 73

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TY+ +L G+C+AG + +A +LLG++   G KL+ IT++++I   CK  +V++A+++   
Sbjct: 74  FTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKT 133

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  GG   PD++++ SLL G+C+   M EAF+  + M   G  PN  +++ L+  L
Sbjct: 134 MSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGL 189



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 33/289 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L +  ++D  Q L+ +M   G+S     + ++++   ++G  ++A  +   + + G
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P       IL+AL    +          MK  G  P++ TYN LL  LCK  R+D A 
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
             L +M    C PD  SYT I++++C+ GQ   A                        H 
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGA------------------------HA 500

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I +      EMV RG+ P+ + Y +++  L   G  + +L +L       C P+      
Sbjct: 501 IFQ------EMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKM 551

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           ++ G    G+  +A ++  RM   GF  +   Y  ++ GL   G +D+A
Sbjct: 552 VVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKA 600


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 262/523 (50%), Gaps = 28/523 (5%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A+    R+R     P V+ Y  +L   L + +      I S M  +G  P+   +N L
Sbjct: 325 EEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSL 384

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV---------EEAREL 157
           + A CK++    AYKLL +M    C P  V Y  ++ SIC  G++         E+A   
Sbjct: 385 VHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNE 444

Query: 158 AMRFGSGVSVYN--ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            +  G+ ++  N  +    LC   K E+A+ ++ EM+  G  P+  TYS +I  LC+   
Sbjct: 445 MLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASR 504

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           VE +  +  +M   G  P+++++T L+  +   G   +A +  + M+R+G  P VV Y+T
Sbjct: 505 VENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTT 564

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM---- 331
           LIH       +  A  +   M    C PNV TY+ALIDG+ K+GN+  A QI+ RM    
Sbjct: 565 LIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDA 624

Query: 332 ----------ISNGCS--PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
                     I N  +  PNVV Y  +V  LC+ +    A  L+E M  + C PNT+ ++
Sbjct: 625 DIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYD 684

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I G C   ++D A ++  +M +    PN+ TY+ L+D L +  R+    ++++++ + 
Sbjct: 685 ALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
               NIV Y  ++ G+ +     EA++L+  M  +G K + +T+  +I  + K GKV+  
Sbjct: 745 SCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKC 804

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           ++L  R  G     P+ ++YT L+   C +G + EA+  L++M
Sbjct: 805 LELF-REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 258/537 (48%), Gaps = 37/537 (6%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E+A K+ + +   G  P    Y+ ++  L   +R      ++  MK  G+ P+V+TY
Sbjct: 468 GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTY 527

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFG 162
            IL+    K   +  A+  L EM   GC P  V+YTT++ +  K  +V  A EL  +   
Sbjct: 528 TILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIA 587

Query: 163 SG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRG------ID------------PNV 200
            G    V  Y ALI+G CK   IE+A  +   M  RG      +D            PNV
Sbjct: 588 KGCFPNVITYTALIDGYCKSGNIEKACQIYARM--RGDADIPDVDMYFKIKNNVAEKPNV 645

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY  ++  LC    V+ +  +L  MFV GC PN   + +L+ G+    +  EA +++++
Sbjct: 646 VTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHK 705

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G+ PNV  YS+LI  L  +  +D  + V  +M ENSC PN+  Y+ +IDG +K   
Sbjct: 706 MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAK 765

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A ++   M   GC PNVV YT M+    +     +   L  +M  + C PN VT+  
Sbjct: 766 TDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTV 825

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I   C  G +D A  LL++MKQ     ++++Y ++++G  R      +  L+ E+EK G
Sbjct: 826 LINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKR--EFILSLGLLEEVEKNG 883

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT--FNIIIYAYCKQGKVNN 498
               I+ Y  ++    +AG +  A +L  +++     + A    +  +IY++    K+++
Sbjct: 884 SAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDH 943

Query: 499 AIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           A +L  D IR G    PD+ ++  LL G+      +EA       L++ +C     W
Sbjct: 944 AFELFYDMIRDG--VIPDLGTFVHLLMGLIRVRRWEEAL-----QLSDSLCQMDINW 993



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/615 (26%), Positives = 275/615 (44%), Gaps = 61/615 (9%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K ++   + +L  M  EG   S  +F S++++Y +      A K+  ++ +   KP   +
Sbjct: 356 KKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVV 415

Query: 68  YNHILDALLAENR------FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           YN ++ ++ +         F +    Y+ M   G   N        + LC   + + AYK
Sbjct: 416 YNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYK 475

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGLC 176
           ++ EM   G  PD  +Y+ ++  +C   +VE A  L     G+G    V  Y  LI+   
Sbjct: 476 VIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFS 535

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K   I++A   L EMV  G +P V+TY+T+I +      V  +  +   M  +GC PN+ 
Sbjct: 536 KAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVI 595

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFL----------------PNVVAYSTLIHGL 280
           ++T+L+ GY   G   +A  ++ RM  +  +                PNVV Y  L+ GL
Sbjct: 596 TYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGL 655

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    + +A  +   M  + C PN   Y ALIDGF KA  L  A +++++M+  G +PNV
Sbjct: 656 CKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNV 715

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y+ ++  L ++        ++ KM   +C PN V +   I GL    + D A KL+  
Sbjct: 716 YTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLM 775

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++  C PN+ TY  ++DG  +  +V +  EL  E+   G   N VTY  +++  C  G 
Sbjct: 776 MEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH 835

Query: 461 VVEAFQLLGKM--------------LIEGTKLDAI-------------------TFNIII 487
           + EA+ LL +M              +IEG K + I                    + ++I
Sbjct: 836 LDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLI 895

Query: 488 YAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
             + K G++  A++L    I            YTSL++    +  +  AF     M+ +G
Sbjct: 896 DNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDG 955

Query: 547 ICPNFATWNVLVRSL 561
           + P+  T+  L+  L
Sbjct: 956 VIPDLGTFVHLLMGL 970



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 155/633 (24%), Positives = 273/633 (43%), Gaps = 108/633 (17%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R GL   AL+   R+++FG KPT   YN ++   L  ++      ++  M   G+  + F
Sbjct: 218 RNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEF 277

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA------- 154
           T     +ALCK  +   A  L+     +   P+ + Y  ++S +C+    EEA       
Sbjct: 278 TLGFFAQALCKVGKWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRM 334

Query: 155 -----------------------------RELAMRFGSG----VSVYNALINGLCKEHKI 181
                                        R L+M    G     +++N+L++  CK    
Sbjct: 335 RSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF 394

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV------ETSLGILGQMFVRGC---N 232
             A+ LL +M      P  + Y+ +I S+C  G +      E +     +M   G     
Sbjct: 395 SYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNK 454

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N+ SF   L G+   G+  +A  + + M+  GF+P+   YS +I  LC+   ++ A  +
Sbjct: 455 VNVVSFARCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M+     P+V TY+ LID F+KAG +  A    + M+ +GC P VV YT ++    +
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL----- 407
                 A+ L E M  + C PN +T+   I G C  G ++ A ++  +M+    +     
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631

Query: 408 -----------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
                      PN+ TY  L+DGL + ++VK+A +L+  +   G + N + Y+ ++ G C
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITF------------------------------NII 486
           +A  + EA ++  KM+  G   +  T+                              NI+
Sbjct: 692 KAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 487 IYA-----YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           IY        K  K + A +L+  +   G   P++++YT+++ G   +G + +     ++
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKG-CKPNVVTYTAMIDGFGKAGKVDKCLELFRE 810

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           M ++G  PNF T+ VL+    +  GHL   Y L
Sbjct: 811 MGSKGCAPNFVTYTVLINHCCAT-GHLDEAYAL 842



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 240/529 (45%), Gaps = 31/529 (5%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R+ G   T  +Y  +LD     +   +       ++ D  E      N+L++  C+N   
Sbjct: 163 RQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLW 222

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNA-- 170
           + A + L  + + G  P  ++Y  +V    +  +++ A    RE++   G  +  +    
Sbjct: 223 NVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS-ELGLSMDEFTLGF 281

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
               LCK  K  EA  L+ E  D    PN I Y+ +IS LC+    E ++  L +M    
Sbjct: 282 FAQALCKVGKWREALSLI-EKED--FVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTS 338

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN+ ++  LL G L   +      + + MI EG  P+   +++L+H  C +     A 
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG------ASQIWNRMISNGCSPNVVAYT 344
            +  +ME+  C P    Y+ LI      G L G      A + +N M+S G   N V   
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVV 458

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
              + LC    F +A+ +I +M      P+T T++  I  LC   RV+ A  L  +MK  
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             +P++ TY  L+D   +   +K+A   + E+ + G +  +VTY T++H   +A  V  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE------------- 511
            +L   M+ +G   + IT+  +I  YCK G +  A Q+  R+RG  +             
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNN 638

Query: 512 --WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
               P++++Y +L+ G+C +  +++A   L+ M  +G  PN   ++ L+
Sbjct: 639 VAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALI 687



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 158/338 (46%), Gaps = 9/338 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   + LL+ M V+G   +  V+ ++I+ + +    ++A ++F+++ E G
Sbjct: 651 LVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERG 710

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ ++D L  + R  ++  + S M  +   PN+  Y  ++  L K  + D AY
Sbjct: 711 YNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAY 770

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL++ M  KGC P+ V+YT ++    K G+V++  EL    GS         Y  LIN  
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    ++EA+ LL EM       +V +Y  +I           SLG+L ++   G  P I
Sbjct: 831 CATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPTI 888

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA--YSTLIHGLCSNGSMDEAVSVS 293
             +  L+  ++  GR   A +L   +I            Y++LI+       +D A  + 
Sbjct: 889 LLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELF 948

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           Y M  +   P++ T+  L+ G  +      A Q+ + +
Sbjct: 949 YDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 255/522 (48%), Gaps = 27/522 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M  +G       +  VI    +    E++  +F  ++  G+ P V  Y  ++D+  
Sbjct: 439 ILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFC 498

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M+  G  PNV TY  LL A  K+ ++  A+ +   M +  C P+AV
Sbjct: 499 KAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAV 558

Query: 137 SYTTIVSSICKLGQVEEARELAMRF---------------------GSGVSVYNALINGL 175
           +Y+ ++  +CK G++++A E+  +                         V  Y ALI+GL
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGL 618

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+ +A  LL  M+  G +PN I Y  +I   C +G ++ +  +  +M   G  P++
Sbjct: 619 CKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSV 678

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           H++TSL+      GR   A  + + M+ +   PNVV Y+ +I GL   G +++A+++   
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSL 738

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE  C PNV TY+ALIDG  K G    + +++ +M S GC+PN V Y  ++   C   +
Sbjct: 739 MEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGL 798

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +AH L+++M   + P +   ++  ++G     +   ++ LL++M+ +E +P    Y  
Sbjct: 799 LDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAPVYGM 856

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT---YNTILHGVCRAGMVVEAFQLLGKML 472
           L+D   +  R++ A EL  E+ +    LN+ +   Y +++  +C A  V EAF L  +M 
Sbjct: 857 LIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMT 916

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWN 513
            +G   D I F  ++    +  K + A+QL   R   G  W 
Sbjct: 917 RKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVNWQ 958



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/536 (27%), Positives = 260/536 (48%), Gaps = 32/536 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+      L  +A+   +R+R     P V  Y  +L   L + +F     I + M  +G
Sbjct: 277 MISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEG 336

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE--- 152
             PN   +N L+   C       AYKL   M   G  P  V+Y   + SIC  GQ E   
Sbjct: 337 CNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSIC--GQEELPN 394

Query: 153 -EARELAMRFGSGVSVYNALING---------LCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
            E  +L  +    +   + ++N          LC   K E+AF +L EM+ +G  P+  T
Sbjct: 395 AELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTST 454

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+ +I+ LC    VE S  +  +M   G NP+++++T L+  +   G   +A   ++ M 
Sbjct: 455 YTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             G  PNVV Y+ L+H    +  + +A  + ++M + +C PN  TYSALIDG  KAG + 
Sbjct: 515 SVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQ 574

Query: 323 GASQIWNRMI--------------SNGCS--PNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            A +++ ++I              ++ C+  PNVV Y  ++  LC+      AH L++ M
Sbjct: 575 KACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
               C PN + ++  I G C  G++D A ++  +M +   LP++ TY  L+D + +  R+
Sbjct: 635 LAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRL 694

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
             A ++++E+       N+VTY  ++ G+ + G + +A  LL  M  +G   + +T+  +
Sbjct: 695 DLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTAL 754

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           I    K GK + +++L  ++   G   P+ ++Y  L+   C +G + EA + L +M
Sbjct: 755 IDGLGKTGKADASLKLFKQMNSKG-CAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 157/633 (24%), Positives = 272/633 (42%), Gaps = 96/633 (15%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R GL ++AL+   R+++FG +P+   YN ++  L +  +  M   +   M   G   +  
Sbjct: 181 RHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240

Query: 102 TYNILLKALCKNNR--------------------------------VDGAYKLLVEMGNK 129
           T     +ALCK  R                                 + A   L  M   
Sbjct: 241 TIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCN 300

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGV----SVYNALINGLCKEHKIEEA 184
            C P+ V+Y T++S   K  Q    + +  M    G     S++N+L++G C       A
Sbjct: 301 SCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYA 360

Query: 185 FWLLCEMVDRGIDPNVITYSTIISS----------------------------------- 209
           + L   M   G  P  + Y+  I S                                   
Sbjct: 361 YKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNT 420

Query: 210 ------LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
                 LC VG  E +  IL +M  +G  P+  ++T ++       +  ++  L+  M R
Sbjct: 421 ANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKR 480

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G  P+V  Y+ LI   C  G +++A S   +M    C PNV TY+AL+  + K+  L+ 
Sbjct: 481 AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQ 540

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA-----------FE--- 369
           A  I++RM+   C PN V Y+ ++  LC+     +A  + EK+            FE   
Sbjct: 541 AHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGND 600

Query: 370 --NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                PN VT+   I GLC   +V  A +LLD M    C PN   Y+ L+DG  ++ ++ 
Sbjct: 601 TCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKID 660

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A E+   + KCG   ++ TY +++  + + G +  A ++L +ML +    + +T+  +I
Sbjct: 661 NAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMI 720

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
               K G++  A+ LL  +   G  +P++++YT+L+ G+  +G    +    ++M ++G 
Sbjct: 721 DGLSKVGEIEKALNLLSLMEEKG-CSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGC 779

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            PN+ T+ VL+    +  G L   ++L D M +
Sbjct: 780 APNYVTYRVLINHCCAA-GLLDEAHLLLDEMKH 811



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/619 (24%), Positives = 251/619 (40%), Gaps = 96/619 (15%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R+ G   T   Y+ + + L  E+       +   +  D  E      N+L++  C++   
Sbjct: 126 RQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLW 185

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM------------- 159
           D A + L  + + G  P AV+Y  +V  +   GQVE      +E++              
Sbjct: 186 DEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYF 245

Query: 160 -----RFGSGVSVYNAL---------------INGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                + G      N L               I+GL +     EA   L  M      PN
Sbjct: 246 AQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPN 305

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TY T++S             I+  M   GCNPN   F SL+ GY   G    A  L+N
Sbjct: 306 VVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFN 365

Query: 260 RMIREGFLPNVVAYSTLIHGLCSN------------------------------------ 283
           RM   G  P  VAY+  I  +C                                      
Sbjct: 366 RMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSR 425

Query: 284 -----GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
                G  ++A  +  +M      P+ +TY+ +I    +A  +  +  ++  M   G +P
Sbjct: 426 CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNP 485

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V  YT ++   C+  +  QA S  ++M    C PN VT+   +       ++  A  + 
Sbjct: 486 DVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIF 545

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI----------------EKCGIQ 442
            +M    C PN  TY+ L+DGL +   +++A E+  ++                + C I 
Sbjct: 546 HRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIA 605

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N+VTY  ++ G+C+A  V +A +LL  ML  G + + I ++ +I  +CK GK++NA ++
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             R+   G + P + +YTSL+  +   G +  A   L +MLN+   PN  T+  ++  L 
Sbjct: 666 FLRMTKCG-YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL- 723

Query: 563 SNLGHLGPVYILDDIMANK 581
           S +G +     L  +M  K
Sbjct: 724 SKVGEIEKALNLLSLMEEK 742



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 149/335 (44%), Gaps = 41/335 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++     LL  M   G   ++ V+ ++I+ + ++G  + A ++F R+ + G
Sbjct: 614 LIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCG 673

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+V  Y  ++D +  + R  +   + S M  D   PNV TY  ++  L K   ++ A 
Sbjct: 674 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKAL 733

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            LL  M  KGC+P+ V+YT ++  + K G+ + + +L  +  S         Y  LIN  
Sbjct: 734 NLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHC 793

Query: 176 CKEHKIEEAFWLLCEMVD--------------RGIDPNVIT------------------- 202
           C    ++EA  LL EM                +G     I                    
Sbjct: 794 CAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPV 853

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS---FTSLLKGYLLGGRTHEASDLWN 259
           Y  +I S    G +ET+L +  ++     + N+ S   + SL++   L  +  EA  L+ 
Sbjct: 854 YGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYT 913

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            M R+G +P+++ + +L+ GL      DEA+ + Y
Sbjct: 914 EMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCY 948


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 287/579 (49%), Gaps = 13/579 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G++    ++   I    + G+ E+A  +F  +   GL P  + Y  +
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++    E        +   MK+  +  + +TY  ++K +C +  +DGAY ++ EM   GC
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 132 APDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            P+ V YTT++ +  +  +  +A R L      G++     YN+LI GL K  +++EA  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L EMV+ G+ PN  TY   IS   +     ++   + +M   G  PN    T L+  Y 
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+  EA   +  M+ +G L +   Y+ L++GL  N  +D+A  +  +M      P+V 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y  LI+GF+K GN+  AS I++ M+  G +PNV+ Y  ++   C++    +A  L+++M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           + +   PN VT+ T I G C  G +  A +L D+MK    +P+   Y  L+DG  R+N V
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-----KLDAI 481
           + A  +    +K G   +   +N +++ V + G      ++L + L++G+     K + +
Sbjct: 749 ERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNR-LMDGSFDRFGKPNDV 806

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I   CK+G +  A +L  +++      P +I+YTSLL G    G   E F    +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNAN-LMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            +  GI P+   ++V++ +          + ++D + A 
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 257/543 (47%), Gaps = 8/543 (1%)

Query: 26  VSCSEGVFISVINSYRRVGL-AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           V   + V       +R   L  + ALK+   +   GL P    Y+ ++D L    R    
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   M   G+  +  TY++L+  L K    D A  L+ EM + G       Y   +  
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           + K G +E+A+ L     A         Y +LI G C+E  + + + LL EM  R I  +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY T++  +C  G+++ +  I+ +M   GC PN+  +T+L+K +L   R  +A  +  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  +G  P++  Y++LI GL     MDEA S   +M EN   PN  TY A I G+ +A 
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A +    M   G  PN V  T ++   C+     +A S    M  +    +  T+ 
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + GL    +VD A ++  +M+     P++ +Y  L++G  ++  +++A  +  E+ + 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G+  N++ YN +L G CR+G + +A +LL +M ++G   +A+T+  II  YCK G +  A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +L D ++  G   PD   YT+L+ G C    ++ A I +     +G   + A +N L+ 
Sbjct: 717 FRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALIN 774

Query: 560 SLF 562
            +F
Sbjct: 775 WVF 777



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 266/592 (44%), Gaps = 63/592 (10%)

Query: 29  SEGVFISVI-NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
            +GV   ++ + Y   G  E+A+ +F       L P +     +LDALL  NR  +   +
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNN---------------------RVDGAYKLLVEM 126
           Y  M    +  +V TY++L+ A C+                        VDGA KL   M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKI 181
             KG  P   +Y  ++  +CK+ ++E+A+ L +   S GVS+    Y+ LI+GL K    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  L+ EMV  GI+     Y   I  +   G +E +  +   M   G  P   ++ SL
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           ++GY       +  +L   M +   + +   Y T++ G+CS+G +D A ++  +M  + C
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV  Y+ LI  F +      A ++   M   G +P++  Y  ++  L +     +A S
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN------------ 409
            + +M      PN  T+  FI G         A K + +M++   LPN            
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 410 -----------------------ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
                                    TY  L++GL + ++V +A E+  E+   GI  ++ 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +Y  +++G  + G + +A  +  +M+ EG   + I +N+++  +C+ G++  A +LLD +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G  +P+ ++Y +++ G C SG + EAF    +M  +G+ P+   +  LV
Sbjct: 689 SVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 245/511 (47%), Gaps = 15/511 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++DG   ++++M   G   +  ++ ++I ++ +      A+++   ++E G+ P +  YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L    R          M  +G++PN FTY   +    + +    A K + EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSG-VSVYNALINGLCKEHKIEEA 184
           G  P+ V  T +++  CK G+V EA    R +  +   G    Y  L+NGL K  K+++A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EM  +GI P+V +Y  +I+    +GN++ +  I  +M   G  PN+  +  LL G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G   +A +L + M  +G  PN V Y T+I G C +G + EA  +  +M+     P+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+ L+DG  +  ++  A  I+      GC+ +   +  ++  + +         ++ 
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLN 790

Query: 365 KM---AFENC-PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           ++   +F+    PN VT+N  I  LC  G ++ A +L  QM+    +P + TY  LL+G 
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI-----EG 475
            ++ R  E F +  E    GI+ + + Y+ I++   + GM  +A  L+ +M       +G
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG 910

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            KL   T   ++  + K G++  A ++++ +
Sbjct: 911 CKLSISTCRALLSGFAKVGEMEVAEKVMENM 941



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 206/426 (48%), Gaps = 15/426 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E  E       +++M+  GV  ++ +   +IN Y + G   +A   +  + + G+    K
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  +++ L   ++      I+  M+  G+ P+VF+Y +L+    K   +  A  +  EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKI 181
             +G  P+ + Y  ++   C+ G++E+A+EL               Y  +I+G CK   +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EAF L  EM  +G+ P+   Y+T++   C + +VE ++ I G    +GC  +   F +L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNAL 772

Query: 242 LKGYLLGGRTHEASDLWNRMIREGF----LPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +      G+T   +++ NR++   F     PN V Y+ +I  LC  G+++ A  + +QM+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             +  P V TY++L++G+ K G       +++  I+ G  P+ + Y+ ++    +  M  
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892

Query: 358 QAHSLIEKMAFEN-----CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +A  L+++M  +N     C  +  T    + G    G ++ A K+++ M + + +P+  T
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952

Query: 413 YNELLD 418
             EL++
Sbjct: 953 VIELIN 958



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 37/314 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+  + LL +M V+G+  +   + ++I+ Y + G   +A ++F  ++  GL P   +Y 
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL-----------LKALCKNNRVDG 118
            ++D     N       I+   K+ G   +   +N L           LK    N  +DG
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           ++       ++   P+ V+Y  ++  +CK G +E A+EL  +  +      V  Y +L+N
Sbjct: 796 SF-------DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR---- 229
           G  K  +  E F +  E +  GI+P+ I YS II++    G    +L ++ QMF +    
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908

Query: 230 -GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC  +I +  +LL G+   G    A  +   M+R  ++P+      LI+  C       
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC------- 961

Query: 289 AVSVSYQMEENSCP 302
            +S + ++E ++ P
Sbjct: 962 -ISSNQRVEADAVP 974



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 34/240 (14%)

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCP-------------------PNTVTFNTFI 382
           +++ +   LC    F +A S++E+M   N P                    + V F    
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            G    G ++ A+ +       E +P ++    LLD LLR NR+   +++   + +  + 
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            ++ TY+ ++   CRAG V      LGK ++  T+ +  T  +          V+ A++L
Sbjct: 219 FDVKTYHMLIIAHCRAGNV-----QLGKDVLFKTEKEFRTATL---------NVDGALKL 264

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + +   G   P   +Y  L+ G+C    +++A   L +M + G+  +  T+++L+  L 
Sbjct: 265 KESMICKG-LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 276/589 (46%), Gaps = 44/589 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I  Y + G+ + A++ F  +   G KP+V   N IL +++ + R  ++  ++  M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+ PNV T+NIL+  LC    +  A  LL +M   G  P  V+Y T+++  CK G+ 
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A EL          + V  YN  I+ LC  H+  +A+ LL +M    I PN +TY+T+
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 207 ISSL-----------------------------------CDVGNVETSLGILGQMFVRGC 231
           I+                                     C VG+ E +L +L  M   G 
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             N  ++ +LL G     +   A  L  RM     +   +AY+ LI GLC NG +DEAV 
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   M ++   P+V TYS+LI+GF + GN+  A +I  RM  +G   N + Y+ ++   C
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFC 524

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           Q+    +A  +   M       +  T N  +  LC  G++  A K L  M +   +PN  
Sbjct: 525 QHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSI 584

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY+ +++G   +     AF    ++ KCG   +  TY ++L G+C+ G +VEA + L ++
Sbjct: 585 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 644

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
                 +D++ +N ++   CK G ++ A+ L D++       PD  +Y+SLL G+C  G 
Sbjct: 645 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL-PDSYTYSSLLTGLCRKGK 703

Query: 532 MQEAFIYLQKMLNEG-ICPNFATWNVLVRSLFSNLGH-LGPVYILDDIM 578
              A       +  G + PN   +  LV  L S  GH     Y  +++M
Sbjct: 704 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL-SKAGHPKAAFYFFEEMM 751



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 264/552 (47%), Gaps = 5/552 (0%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L ++M  +G+  + G F  +IN     G  ++A  +  ++ E G  PT+  YN +L+
Sbjct: 217 VWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 276

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               + R+     +   M   G+E +V TYN+ +  LC N+R   AY LL +M  +  +P
Sbjct: 277 WYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP 336

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           + V+Y T+++   K G++  A ++               YNALI G C     EEA  LL
Sbjct: 337 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 396

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M   G+  N +TY T+++ LC     E +  +L +M V        ++T L+ G    
Sbjct: 397 DHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKN 456

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L   M ++G  P+V+ YS+LI+G C  G++  A  +  +M  +    N   Y
Sbjct: 457 GMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIY 516

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI  F + GN+  A +++  M  NG   +      +V  LC++    +A   +  M+ 
Sbjct: 517 STLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 576

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               PN++T++  I G    G    A    D M +    P+  TY  LL GL +   + E
Sbjct: 577 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 636

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A + +  +      ++ V YNT+L   C++G + EA  L  KM+      D+ T++ ++ 
Sbjct: 637 AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 696

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C++GK   A+ L     G G   P+ + YT L+ G+  +G  + AF + ++M+ +G C
Sbjct: 697 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 756

Query: 549 PNFATWNVLVRS 560
           P+   +N ++ S
Sbjct: 757 PDTVAFNAIIDS 768



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 266/590 (45%), Gaps = 83/590 (14%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  +  VG  E+AL++   +   GL+     Y  +L+ L    +F +   +   M+ +
Sbjct: 378 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVN 437

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            M      Y +L+  LCKN  +D A +L+  M   G  PD ++Y+++++  C++G ++ A
Sbjct: 438 DMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSA 497

Query: 155 RELAMR-FGSGV------------------------SVY---------------NALING 174
           +E+  R + SG+                         VY               N L++ 
Sbjct: 498 KEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSS 557

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC++ K+ EA   LC M   G+ PN ITY  II+    +G+   +      M   G +P+
Sbjct: 558 LCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 617

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP---NVVAYSTLIHGLCSNGSMDEAVS 291
             ++ SLLKG   GG   EA    NR+    ++P   + V Y+TL+   C +G++ EAV+
Sbjct: 618 FFTYGSLLKGLCKGGNLVEAKKFLNRL---HYIPGAVDSVMYNTLLAETCKSGNLHEAVA 674

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC-SPNVVAYTCMVKVL 350
           +  +M +N+  P+  TYS+L+ G  + G  + A  ++   +  G   PN V YTC+V  L
Sbjct: 675 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 734

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +      A    E+M  +   P+TV FN  I      G++  A      M+ +   PN+
Sbjct: 735 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNL 794

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN LL G  +   +     L + + + GI  + +T+++++ G+ ++G+     +LLGK
Sbjct: 795 ATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGK 854

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M++EGT  D  TFNI+I  Y + GK                                   
Sbjct: 855 MIMEGTLADQFTFNILINKYSESGK----------------------------------- 879

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            M++AF  +  M   G+ P+  T+N +   L           +L +++ N
Sbjct: 880 -MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 928



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 155/637 (24%), Positives = 282/637 (44%), Gaps = 77/637 (12%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ L +   +D    L+  M  +GV+     + S+IN + RVG  + A ++  R+   G
Sbjct: 449  LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            L     IY+ ++         +    +Y+ M  +G   + FT N+L+ +LC++ ++  A 
Sbjct: 509  LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 121  KLLVEMGNKGCAPDAVSYTTIVS-----------------------------------SI 145
            K L  M   G  P++++Y  I++                                    +
Sbjct: 569  KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 146  CKLGQVEEARELAMRF----GSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK G + EA++   R     G+  SV YN L+   CK   + EA  L  +MV   + P+ 
Sbjct: 629  CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TYS++++ LC  G   T++ + G    RG   PN   +T L+ G    G    A   + 
Sbjct: 689  YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 748

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             M+++G  P+ VA++ +I      G M +A      M      PN+ TY+ L+ GF+K  
Sbjct: 749  EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 808

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             LL    +++ M+  G  P+ + +  ++  L ++ +      L+ KM  E    +  TFN
Sbjct: 809  ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 868

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I      G++  A  L++ M      P+  TYN + +GL + +  +E+  ++ E+ + 
Sbjct: 869  ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 928

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM-------------------LIEGTKLDA 480
            G+      Y T+++G+CR G +  AF+L  +M                   L  G   DA
Sbjct: 929  GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 988

Query: 481  I----------------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +                TF  +++ +C+  K+  A++L   +   G    D+++Y  L+ 
Sbjct: 989  MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG-LKLDVVAYNVLIM 1047

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C +G    AF   ++M +  +CPN  T+ VLV ++
Sbjct: 1048 GMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/574 (23%), Positives = 250/574 (43%), Gaps = 19/574 (3%)

Query: 4    KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
            KLGE       +  L  M   G+  +   +  +IN Y  +G    A   F  + + G  P
Sbjct: 563  KLGE------AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 616

Query: 64   TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            +   Y  +L  L             + +       +   YN LL   CK+  +  A  L 
Sbjct: 617  SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 676

Query: 124  VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS---------VYNALING 174
             +M      PD+ +Y+++++ +C+ G+   A  L   FG+ +          +Y  L++G
Sbjct: 677  DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCL---FGTAMGRGTLFPNHVMYTCLVDG 733

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            L K    + AF+   EM+ +G  P+ + ++ II S    G +  +      M   G  PN
Sbjct: 734  LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 793

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            + ++  LL G+           L++ M+REG  P+ + + +LI GL  +G  D  V +  
Sbjct: 794  LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 853

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +M       +  T++ LI+ ++++G +  A  + N M + G  P+   Y  +   L + +
Sbjct: 854  KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 913

Query: 355  MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             F ++  ++ +M      P    + T I G+C  G +  A KL D+M+      +    +
Sbjct: 914  AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 973

Query: 415  ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             ++ GLL   + ++A  ++  + +  +   I T+ T++H  CR   + EA +L G M + 
Sbjct: 974  AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1033

Query: 475  GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            G KLD + +N++I   C  G    A +L + +R   +  P+I +Y  L+  I  +  + +
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR-HRDLCPNITTYAVLVDAISAANNLIQ 1092

Query: 535  AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
                L  +   G+     +   L + L   +G L
Sbjct: 1093 GEKLLTDLQERGLISWGGSTQHLDKELTVAMGKL 1126


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 243/460 (52%), Gaps = 12/460 (2%)

Query: 28  CSEGVFISVINSYRRV---GLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           C    +I   +SYR++   GL       AL +F R+      P++  +  +L  +   NR
Sbjct: 39  CGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR 98

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           + ++  ++  M+  G+ P + T NI++  +C +++   A   L +M   G  PD V++T+
Sbjct: 99  YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158

Query: 141 IVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++  C   ++E+A     + L M F   V  Y  LI  LCK   +  A  L  +M   G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             PNV+TY+ +++ LC++G    +  +L  M  R   PN+ +FT+L+  ++  G+  EA 
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L+N MI+    P+V  Y +LI+GLC  G +DEA  + Y ME N C PN   Y+ LI GF
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K+  +    +I+  M   G   N + YT +++  C       A  +  +M+    PP+ 
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T+N  + GLC  G+V+ A+ + + M++ E   NI TY  ++ G+ ++ +V++AF+L   
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +   G++ N++TY T++ G CR G++ EA  L  KM  +G
Sbjct: 459 LFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 223/459 (48%), Gaps = 6/459 (1%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
           +Y  +L+    N + + A  L   M +    P  + +T ++S I K+ + +    L    
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             +     +   N +++ +C   +   A   L +M+  G +P+++T++++++  C    +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E ++ +  Q+   G  PN+ ++T+L++        + A +L+N+M   G  PNVV Y+ L
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GLC  G   +A  +   M +    PNV T++ALID F K G L+ A +++N MI    
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+V  Y  ++  LC   +  +A  +   M    C PN V + T I G C   RV+  MK
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +  +M Q   + N  TY  L+ G   V R   A E+  ++       +I TYN +L G+C
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
             G V +A  +   M      ++ +T+ III   CK GKV +A  L   +   G   P++
Sbjct: 410 CNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKG-MKPNV 468

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           I+YT+++ G C  G + EA    +KM  +G  PN + + 
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 208/422 (49%), Gaps = 5/422 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++   ++   +  + +F +++  G+ P +   N ++  +   ++    +     M 
Sbjct: 86  FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP++ T+  LL   C  NR++ A  L  ++   G  P+ V+YTT++  +CK   + 
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205

Query: 153 EARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A EL  + G+      V  YNAL+ GLC+  +  +A WLL +M+ R I+PNVIT++ +I
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +   VG +  +  +   M      P++ ++ SL+ G  + G   EA  ++  M R G  
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN V Y+TLIHG C +  +++ + + Y+M +     N  TY+ LI G+   G    A ++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +N+M S    P++  Y  ++  LC N    +A  + E M       N VT+   I+G+C 
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G+V+ A  L   +      PN+ TY  ++ G  R   + EA  L  ++++ G   N   
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505

Query: 448 YN 449
           Y 
Sbjct: 506 YK 507



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 199/398 (50%), Gaps = 1/398 (0%)

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
             S Y  ++       +  +A  L   MV     P++I ++ ++S +  +   +  + + 
Sbjct: 47  AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            QM + G  P + +   ++    L  +   AS    +M++ GF P++V +++L++G C  
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +++A+++  Q+      PNV TY+ LI    K  +L  A +++N+M +NG  PNVV Y
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             +V  LC+   +  A  L+  M      PN +TF   I      G++  A +L + M Q
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P++ TY  L++GL     + EA ++   +E+ G   N V Y T++HG C++  V +
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             ++  +M  +G   + IT+ ++I  YC  G+ + A ++ +++       PDI +Y  LL
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM-SSRRAPPDIRTYNVLL 405

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C +G +++A +  + M    +  N  T+ ++++ +
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 142/274 (51%), Gaps = 8/274 (2%)

Query: 9   CEID---GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           CEI       +LL+ M    +  +   F ++I+++ +VG   +A +++  + +  + P V
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y  +++ L           ++  M+R+G  PN   Y  L+   CK+ RV+   K+  E
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHK 180
           M  KG   + ++YT ++   C +G+ + A+E+     + R    +  YN L++GLC   K
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGK 413

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E+A  +   M  R +D N++TY+ II  +C +G VE +  +   +F +G  PN+ ++T+
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           ++ G+   G  HEA  L+ +M  +GFLPN   Y 
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 171/363 (47%), Gaps = 36/363 (9%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+  +L+  L   + ++A DL+ RM+    LP+++ ++ L+  +      D  +S+  QM
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 297 EENSCPP-----------------------------------NVTTYSALIDGFAKAGNL 321
           +    PP                                   ++ T+++L++G+     +
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  ++++++  G  PNVV YT +++ LC+N   + A  L  +M      PN VT+N  
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GLC  GR   A  LL  M +    PN+ T+  L+D  ++V ++ EA EL   + +  +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ TY ++++G+C  G++ EA Q+   M   G   + + +  +I+ +CK  +V + ++
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   +   G    + I+YT L+ G C  G    A     +M +    P+  T+NVL+  L
Sbjct: 350 IFYEMSQKGVV-ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 562 FSN 564
             N
Sbjct: 409 CCN 411



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 143/298 (47%), Gaps = 5/298 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM   G   +   + +++     +G    A  +   + +  ++P V  +  ++DA +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +Y+ M +  + P+VFTY  L+  LC    +D A ++   M   GC P+ V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YTT++   CK  +VE+  ++          +    Y  LI G C   + + A  +  +M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             R   P++ TY+ ++  LC  G VE +L I   M  R  + NI ++T +++G    G+ 
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            +A DL+  +  +G  PNV+ Y+T+I G C  G + EA S+  +M+E+   PN + Y 
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 242/465 (52%), Gaps = 6/465 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK---LGQVEEARELAMRFG 162
           LL   C+  + + +   L  M +KG  PD +  T ++        +G+     E+  R+G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 163 S-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YNALI+G  K +++E A  +L  M  RG  P+V+TY+ +I S C  G ++ +L 
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  ++    C P + ++T L++  +L G    A  L + M+ +G  P+ + Y+ +I G+C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +D+A  +   +    C P++ TY+ L+      G      ++ + MIS GC PNVV
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            ++ ++  LC++    +A +L+  M  +   P+   ++  I G C  GR+D A + L+ M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               CLP+I  YN ++ GL R  +  +A E+  ++++ G   N+ +YNT+   +  +G  
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A +++ K+L +G   D IT+N +I   C+ G V+ AI+LL  ++  G + P+++SY  
Sbjct: 435 YRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ-SGRYRPNVVSYNI 493

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL-FSNL 565
           +L G+C      +A   L  M  +G  PN  T+ +L+  + FS L
Sbjct: 494 ILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGL 538



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 247/502 (49%), Gaps = 6/502 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +Q  V      E   + ++N   R G   ++L     + + G  P V +   ++      
Sbjct: 58  RQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNS 117

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                   +   ++R G +P+VF YN L+    K N+++ A ++L  M ++G  PD V+Y
Sbjct: 118 RNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTY 176

Query: 139 TTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
             ++ S C  G+++ A E+            V  Y  LI     +  I+ A  LL EM+ 
Sbjct: 177 NIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLS 236

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +G++P+ +TY+ II  +C    V+ +  +L  +  RGC P+I ++  LL+  L  G+  E
Sbjct: 237 KGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSE 296

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
              L + MI  G  PNVV +S LI  LC +G ++EAV++   M+E    P+   Y  LI 
Sbjct: 297 GEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIA 356

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF + G L  A++    MIS+GC P++V Y  ++  LC+     QA  + EK+    CPP
Sbjct: 357 GFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPP 416

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N  ++NT    L   G    A++++ ++      P+  TYN L+  L R   V EA EL+
Sbjct: 417 NVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELL 476

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            +++    + N+V+YN IL G+C+     +A ++L  M  +G + +  T+ ++I      
Sbjct: 477 VDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFS 536

Query: 494 GKVNNAIQLLDRIRGGGEWNPD 515
           G    A++L + + G    + D
Sbjct: 537 GLRAEAMELANSLHGMNAISED 558



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 200/397 (50%), Gaps = 5/397 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    +L +MK  G       +  +I S+   G  + AL++F  + +   +PTV  Y 
Sbjct: 153 QLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYT 212

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++A + +    +   +   M   G+EP+  TYN +++ +CK   VD A++LL  + ++
Sbjct: 213 ILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSR 272

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC PD ++Y  ++ ++   G+  E  +L     S      V  ++ LI  LC++ K+EEA
Sbjct: 273 GCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEA 332

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M ++G+ P+   Y  +I+  C  G ++ +   L  M   GC P+I ++ +++ G
Sbjct: 333 VNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAG 392

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  +A +++ ++   G  PNV +Y+TL   L S+G    A+ +  ++      P+
Sbjct: 393 LCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPD 452

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY++LI    + G +  A ++   M S    PNVV+Y  ++  LC+ N  + A  ++ 
Sbjct: 453 EITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLA 512

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            M  + C PN  T+   I+G+   G    AM+L + +
Sbjct: 513 AMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 64/127 (50%), Gaps = 8/127 (6%)

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             + +A  V+E  +  GK        D   +N +I  + K  ++ NA ++LDR++  G +
Sbjct: 118 RNIGKATRVMEILERYGKP-------DVFAYNALISGFIKANQLENANRVLDRMKSRG-F 169

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            PD+++Y  ++   C+ G +  A    +++L +   P   T+ +L+ +   + G    + 
Sbjct: 170 LPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMK 229

Query: 573 ILDDIMA 579
           +LD++++
Sbjct: 230 LLDEMLS 236


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 157/550 (28%), Positives = 273/550 (49%), Gaps = 15/550 (2%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C++  V +  + + V G     GVF ++ +    +G+ E+A++ F +++ F + P  +  
Sbjct: 175 CDVFDVLWSTRNVCVPGF----GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N +L       +   +   + +M   G  P VFTYNI++  +CK   V+ A  L  EM  
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290

Query: 129 KGCAPDAVSYTTIVSSICKLGQV-------EEARELAMRFGSGVSVYNALINGLCKEHKI 181
           +G  PD V+Y +++    K+G++       EE +++       V  YNALIN  CK  K+
Sbjct: 291 RGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCE--PDVITYNALINCFCKFGKL 348

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
                   EM   G+ PNV++YST++ + C  G ++ ++     M   G  PN +++TSL
Sbjct: 349 PIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSL 408

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +      G   +A  L N M++ G   NVV Y+ LI GLC    M EA  +  +M+    
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN+ +Y+ALI GF KA N+  A ++ N +   G  P+++ Y   +  LC       A  
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++ +M       N++ + T +      G     + LLD+MK+ +    + T+  L+DGL 
Sbjct: 529 VMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC 588

Query: 422 RVNRVKEAFELVTEIE-KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           +   V +A +    I    G+Q N   +  ++ G+C+   V  A  L  +M+ +G   D 
Sbjct: 589 KNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDR 648

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
             +  ++    KQG V  A+ L D++   G    D+++YTSL+WG+ +   +Q+A  +L+
Sbjct: 649 TAYTSLMDGNFKQGNVLEALALRDKMAEIG-MKLDLLAYTSLVWGLSHCNQLQKARSFLE 707

Query: 541 KMLNEGICPN 550
           +M+ EGI P+
Sbjct: 708 EMIGEGIHPD 717



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 244/508 (48%), Gaps = 6/508 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +  +  + D V+   + M   G   +   +  +I+   + G  E A  +F  ++  G
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++D      R       +  MK    EP+V TYN L+   CK  ++    
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGL 175
           +   EM   G  P+ VSY+T+V + CK G +++A +  +   R G       Y +LI+  
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + +AF L  EM+  G++ NV+TY+ +I  LCD   ++ +  + G+M   G  PN+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ G++       A +L N +   G  P+++ Y T I GLCS   ++ A  V  +
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E     N   Y+ L+D + K+GN      + + M        VV +  ++  LC+N +
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592

Query: 356 FHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +A     +++ +     N   F   I GLC   +V+ A  L +QM Q   +P+ T Y 
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   V EA  L  ++ + G++L+++ Y +++ G+     + +A   L +M+ E
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           G   D +    ++  + + G ++ A++L
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVEL 740



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 6/487 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P    ++ L   L     ++ A +   +M      P   S   ++    KLG+ ++ +  
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 158 AMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                G+G    V  YN +I+ +CKE  +E A  L  EM  RG+ P+ +TY+++I     
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           VG ++ ++    +M    C P++ ++ +L+  +   G+     + +  M   G  PNVV+
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTL+   C  G M +A+     M      PN  TY++LID   K GNL  A ++ N M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   NVV YT ++  LC      +A  L  KM      PN  ++N  I G      +D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++LL+++K     P++  Y   + GL  + +++ A  ++ E+++CGI+ N + Y T++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
               ++G   E   LL +M     ++  +TF ++I   CK   V+ A+   +RI      
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 609

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
             +   +T+++ G+C    ++ A    ++M+ +G+ P+   +  L+   F   G++    
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ-GNVLEAL 668

Query: 573 ILDDIMA 579
            L D MA
Sbjct: 669 ALRDKMA 675



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 211/450 (46%), Gaps = 45/450 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           MI+  G+   +D      ++MK   + C   V  + ++IN + + G     L+ +  ++ 
Sbjct: 303 MIDGFGKVGRLDDTVCFFEEMK--DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            GLKP V  Y+ ++DA   E         Y +M+R G+ PN +TY  L+ A CK   +  
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           A++L  EM   G   + V+YT ++  +C   +++EA EL  +  +      ++ YNALI+
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 480

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K   ++ A  LL E+  RGI P+++ Y T I  LC +  +E +  ++ +M   G   
Sbjct: 481 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 540

Query: 234 NIHSFTSLLKGYLLGGRTHE-----------------------------------ASDLW 258
           N   +T+L+  Y   G   E                                   A D +
Sbjct: 541 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 600

Query: 259 NRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           NR+  + G   N   ++ +I GLC +  ++ A ++  QM +    P+ T Y++L+DG  K
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            GN+L A  + ++M   G   +++AYT +V  L   N   +A S +E+M  E   P+ V 
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             + +K     G +D A++L   + +++ L
Sbjct: 721 CISVLKKHYELGCIDEAVELQSYLMKHQLL 750



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 165/333 (49%), Gaps = 6/333 (1%)

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           C    +   S+LK  +L     +  D LW+   R   +P    +  L   L   G ++EA
Sbjct: 154 CARMYYDANSVLKEMVLSKADCDVFDVLWS--TRNVCVPGFGVFDALFSVLIDLGMLEEA 211

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +    +M+     P   + + L+  FAK G      + +  MI  G  P V  Y  M+  
Sbjct: 212 IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 271

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           +C+      A  L E+M F    P+TVT+N+ I G    GR+D  +   ++MK   C P+
Sbjct: 272 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 331

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           + TYN L++   +  ++    E   E++  G++ N+V+Y+T++   C+ GM+ +A +   
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICN 528
            M   G   +  T+  +I A CK G +++A +L +  ++ G EWN  +++YT+L+ G+C+
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN--VVTYTALIDGLCD 449

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  M+EA     KM   G+ PN A++N L+   
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/579 (27%), Positives = 287/579 (49%), Gaps = 13/579 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G++    ++   I    + G+ E+A  +F  +   GL P  + Y  +
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++    E        +   MK+  +  + +TY  ++K +C +  +DGAY ++ EM   GC
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 132 APDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            P+ V YTT++ +  +  +  +A R L      G++     YN+LI GL K  +++EA  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L EMV+ G+ PN  TY   IS   +     ++   + +M   G  PN    T L+  Y 
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G+  EA   +  M+ +G L +   Y+ L++GL  N  +D+A  +  +M      P+V 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y  LI+GF+K GN+  AS I++ M+  G +PNV+ Y  ++   C++    +A  L+++M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           + +   PN VT+ T I G C  G +  A +L D+MK    +P+   Y  L+DG  R+N V
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-----KLDAI 481
           + A  +    +K G   +   +N +++ V + G      ++L + L++G+     K + +
Sbjct: 749 ERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNR-LMDGSFDRFGKPNDV 806

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I   CK+G +  A +L  +++      P +I+YTSLL G    G   E F    +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNAN-LMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            +  GI P+   ++V++ +          + ++D + A 
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 257/543 (47%), Gaps = 8/543 (1%)

Query: 26  VSCSEGVFISVINSYRRVGL-AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           V   + V       +R   L  + ALK+   +   GL P    Y+ ++D L    R    
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   M   G+  +  TY++L+  L K    D A  L+ EM + G       Y   +  
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           + K G +E+A+ L     A         Y +LI G C+E  + + + LL EM  R I  +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY T++  +C  G+++ +  I+ +M   GC PN+  +T+L+K +L   R  +A  +  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  +G  P++  Y++LI GL     MDEA S   +M EN   PN  TY A I G+ +A 
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A +    M   G  PN V  T ++   C+     +A S    M  +    +  T+ 
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + GL    +VD A ++  +M+     P++ +Y  L++G  ++  +++A  +  E+ + 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G+  N++ YN +L G CR+G + +A +LL +M ++G   +A+T+  II  YCK G +  A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +L D ++  G   PD   YT+L+ G C    ++ A I +     +G   + A +N L+ 
Sbjct: 717 FRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALIN 774

Query: 560 SLF 562
            +F
Sbjct: 775 WVF 777



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 265/592 (44%), Gaps = 63/592 (10%)

Query: 29  SEGVFISVI-NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
            +GV   ++ + Y      E+A+ +F       L P +     +LDALL  NR  +   +
Sbjct: 149 DDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNN---------------------RVDGAYKLLVEM 126
           Y  M    +  +V TY++L+ A C+                        VDGA KL   M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKI 181
             KG  P   +Y  ++  +CK+ ++E+A+ L +   S GVS+    Y+ LI+GL K    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  L+ EMV  GI+     Y   I  +   G +E +  +   M   G  P   ++ SL
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           ++GY       +  +L   M +   + +   Y T++ G+CS+G +D A ++  +M  + C
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV  Y+ LI  F +      A ++   M   G +P++  Y  ++  L +     +A S
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN------------ 409
            + +M      PN  T+  FI G         A K + +M++   LPN            
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 410 -----------------------ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
                                    TY  L++GL + ++V +A E+  E+   GI  ++ 
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +Y  +++G  + G + +A  +  +M+ EG   + I +N+++  +C+ G++  A +LLD +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G  +P+ ++Y +++ G C SG + EAF    +M  +G+ P+   +  LV
Sbjct: 689 SVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 245/511 (47%), Gaps = 15/511 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++DG   ++++M   G   +  ++ ++I ++ +      A+++   ++E G+ P +  YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L    R          M  +G++PN FTY   +    + +    A K + EM   
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSG-VSVYNALINGLCKEHKIEEA 184
           G  P+ V  T +++  CK G+V EA    R +  +   G    Y  L+NGL K  K+++A
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EM  +GI P+V +Y  +I+    +GN++ +  I  +M   G  PN+  +  LL G
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G   +A +L + M  +G  PN V Y T+I G C +G + EA  +  +M+     P+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+ L+DG  +  ++  A  I+      GC+ +   +  ++  + +         ++ 
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLN 790

Query: 365 KM---AFENC-PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           ++   +F+    PN VT+N  I  LC  G ++ A +L  QM+    +P + TY  LL+G 
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI-----EG 475
            ++ R  E F +  E    GI+ + + Y+ I++   + GM  +A  L+ +M       +G
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG 910

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            KL   T   ++  + K G++  A ++++ +
Sbjct: 911 CKLSISTCRALLSGFAKVGEMEVAEKVMENM 941



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 206/426 (48%), Gaps = 15/426 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E  E       +++M+  GV  ++ +   +IN Y + G   +A   +  + + G+    K
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  +++ L   ++      I+  M+  G+ P+VF+Y +L+    K   +  A  +  EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKI 181
             +G  P+ + Y  ++   C+ G++E+A+EL               Y  +I+G CK   +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EAF L  EM  +G+ P+   Y+T++   C + +VE ++ I G    +GC  +   F +L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNAL 772

Query: 242 LKGYLLGGRTHEASDLWNRMIREGF----LPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +      G+T   +++ NR++   F     PN V Y+ +I  LC  G+++ A  + +QM+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             +  P V TY++L++G+ K G       +++  I+ G  P+ + Y+ ++    +  M  
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892

Query: 358 QAHSLIEKMAFEN-----CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +A  L+++M  +N     C  +  T    + G    G ++ A K+++ M + + +P+  T
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952

Query: 413 YNELLD 418
             EL++
Sbjct: 953 VIELIN 958



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 37/314 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+  + LL +M V+G+  +   + ++I+ Y + G   +A ++F  ++  GL P   +Y 
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL-----------LKALCKNNRVDG 118
            ++D     N       I+   K+ G   +   +N L           LK    N  +DG
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           ++       ++   P+ V+Y  ++  +CK G +E A+EL  +  +      V  Y +L+N
Sbjct: 796 SF-------DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR---- 229
           G  K  +  E F +  E +  GI+P+ I YS II++    G    +L ++ QMF +    
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908

Query: 230 -GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC  +I +  +LL G+   G    A  +   M+R  ++P+      LI+  C       
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC------- 961

Query: 289 AVSVSYQMEENSCP 302
            +S + ++E ++ P
Sbjct: 962 -ISSNQRVEADAVP 974



 Score = 46.2 bits (108), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 34/232 (14%)

Query: 350 LCQNNMFHQAHSLIEKMAFENCP-------------------PNTVTFNTFIKGLCGCGR 390
           LC    F +A S++E+M   N P                    + V F     G      
Sbjct: 107 LCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKEY 166

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+ +       E +P ++    LLD LLR NR+   +++   + +  +  ++ TY+ 
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++   CRAG V      LGK ++  T+ +  T  +          V+ A++L + +   G
Sbjct: 227 LIIAHCRAGNV-----QLGKDVLFKTEKEFRTATL---------NVDGALKLKESMICKG 272

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              P   +Y  L+ G+C    +++A   L +M + G+  +  T+++L+  L 
Sbjct: 273 -LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 141/490 (28%), Positives = 258/490 (52%), Gaps = 6/490 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +  IL +L+    F     +   M+  G+EP++ T +IL+   C   ++  ++ +
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
           L ++   G  P+ +  TT++  +C  G+V+++     + +A  F      Y  L+NGLCK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +   A  LL  + DR   P+V+ Y+TII  LC    V  +     +M  RG  P++ +
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++L+ G+ L G+   A  L N M  +   P+V  Y+ LI  LC  G + EA ++   M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    PNV TYS L+DG+   G +  A QI++ M+    +P+V +Y  M+  LC+     
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A +L+ +M  +N  PNTVT+N+ I GLC  GR+  A+ L+ ++       ++ TY  LL
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL +   + +A  L  ++++ GIQ N  TY  ++ G+C+   +  A +L   +L++G  
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCC 549

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           +D  T+N++I   CK+G ++ A+ +  ++   G   PD +++  ++  +       +A  
Sbjct: 550 IDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG-CIPDAVTFEIIIRSLFEKDENDKAEK 608

Query: 538 YLQKMLNEGI 547
            L +M+ +G+
Sbjct: 609 LLHEMIAKGL 618



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 232/470 (49%), Gaps = 6/470 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           P++  +  +L +L K      A  L  +M  KG  PD V+ + +++  C LGQ+  +   
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 155 --RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
             + L + +     +   L+ GLC + +++++     ++V +G   N ++Y T+++ LC 
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G    ++ +L  +  R   P++  + +++ G       +EA D +  M   G  P+V+ 
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTLI G C  G +  A S+  +M   +  P+V TY+ LID   K G L  A  +   M 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G  PNVV Y+ ++   C     H A  +   M      P+  ++N  I GLC    VD
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            AM LL +M     +PN  TYN L+DGL +  R+  A +L+ E+   G   +++TY ++L
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLL 489

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+   + +A  L  KM   G + +  T+  +I   CK  ++ NA +L   I   G  
Sbjct: 490 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG-C 548

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             D+ +Y  ++ G+C  G + EA     KM + G  P+  T+ +++RSLF
Sbjct: 549 CIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLF 598



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 246/483 (50%), Gaps = 5/483 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  ++     A+ +  ++   G++P +   + +++      + +    +   + 
Sbjct: 135 FGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKIL 194

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +PN      L+K LC    V  +     ++  +G   + VSY T+++ +CK+G+  
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 254

Query: 153 EARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L            V +YN +I+GLCK+  + EA+    EM  RGI P+VITYST+I
Sbjct: 255 CAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C  G +  +  +L +M ++  NP+++++T L+      G+  EA +L   M +EG  
Sbjct: 315 CGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVK 374

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNVV YSTL+ G C  G +  A  + + M +    P+V +Y+ +I+G  K  ++  A  +
Sbjct: 375 PNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNL 434

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              M+     PN V Y  ++  LC++     A  L++++     P + +T+ + + GLC 
Sbjct: 435 LREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCK 494

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
              +D A+ L  +MK+    PN  TY  L+DGL +  R+K A +L   I   G  +++ T
Sbjct: 495 NQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYT 554

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN ++ G+C+ GM+ EA  +  KM   G   DA+TF III +  ++ + + A +LL  + 
Sbjct: 555 YNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMI 614

Query: 508 GGG 510
             G
Sbjct: 615 AKG 617



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 230/464 (49%), Gaps = 5/464 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM+V+G+         +IN +  +G    +  +  +I + G +P   I   ++  L 
Sbjct: 154 LSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLC 213

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +         +  +   G + N  +Y  LL  LCK      A KLL  + ++   PD V
Sbjct: 214 LKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVV 273

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y TI+  +CK   V EA +      S      V  Y+ LI G C   ++  AF LL EM
Sbjct: 274 MYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEM 333

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             + I+P+V TY+ +I +LC  G ++ +  +LG M   G  PN+ ++++L+ GY L G  
Sbjct: 334 TLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEV 393

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H A  +++ M++    P+V +Y+ +I+GLC   S+DEA+++  +M   +  PN  TY++L
Sbjct: 394 HNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSL 453

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +  A  +   +   G   +V+ YT ++  LC+N    +A +L  KM     
Sbjct: 454 IDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGI 513

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+   I GLC   R+  A KL   +    C  ++ TYN ++ GL +   + EA  
Sbjct: 514 QPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALA 573

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           + +++E  G   + VT+  I+  +       +A +LL +M+ +G
Sbjct: 574 MKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 209/405 (51%), Gaps = 1/405 (0%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L MR    +  +  ++  L K      A  L  +M  +GI+P+++T S +I+  C +G +
Sbjct: 124 LLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQM 183

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             S  +LG++   G  PN    T+L+KG  L G   ++    ++++ +GF  N V+Y TL
Sbjct: 184 AFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTL 243

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++GLC  G    A+ +   +E+ S  P+V  Y+ +IDG  K   +  A   +  M S G 
Sbjct: 244 LNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGI 303

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+V+ Y+ ++   C       A SL+ +M  +N  P+  T+   I  LC  G++  A  
Sbjct: 304 FPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKN 363

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  M +    PN+ TY+ L+DG   V  V  A ++   + +  +  ++ +YN +++G+C
Sbjct: 364 LLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLC 423

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +   V EA  LL +ML +    + +T+N +I   CK G++ +A+ L+  +   G+   D+
Sbjct: 424 KGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQ-PADV 482

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I+YTSLL G+C +  + +A     KM   GI PN  T+  L+  L
Sbjct: 483 ITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 208/399 (52%), Gaps = 5/399 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K E+    +   ++  +G   ++  + +++N   ++G    A+K+   I +   +P V +
Sbjct: 215 KGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVM 274

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN I+D L  +   +     Y+ M   G+ P+V TY+ L+   C   ++ GA+ LL EM 
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT 334

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIE 182
            K   PD  +YT ++ ++CK G+++EA+  L +    GV      Y+ L++G C   ++ 
Sbjct: 335 LKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVH 394

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  +   MV   ++P+V +Y+ +I+ LC   +V+ ++ +L +M  +   PN  ++ SL+
Sbjct: 395 NAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLI 454

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    GR   A DL   +   G   +V+ Y++L+ GLC N ++D+A+++  +M+E    
Sbjct: 455 DGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQ 514

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN  TY+ALIDG  K   L  A +++  ++  GC  +V  Y  M+  LC+  M  +A ++
Sbjct: 515 PNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAM 574

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             KM    C P+ VTF   I+ L      D A KLL +M
Sbjct: 575 KSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEM 613



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 196/419 (46%), Gaps = 52/419 (12%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG--------- 244
           +GI PN++T S +I+ L  +G +  S  +LG++   G  PN  + T+L+KG         
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLP 64

Query: 245 ------------YLLGGRTH------------------------------EASDLWNRMI 262
                       +L    +H                              +A   +N M+
Sbjct: 65  RMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGML 124

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
                P+++ +  ++  L        A+S+S QME     P++ T S LI+ F   G + 
Sbjct: 125 LMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMA 184

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            +  +  +++  G  PN +  T ++K LC      ++    +K+  +    N V++ T +
Sbjct: 185 FSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLL 244

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  G    A+KLL  ++     P++  YN ++DGL +   V EA++  TE+   GI 
Sbjct: 245 NGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIF 304

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            +++TY+T++ G C AG ++ AF LL +M ++    D  T+ I+I A CK+GK+  A  L
Sbjct: 305 PDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNL 364

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L  +   G   P++++Y++L+ G C  G +  A      M+   + P+  ++N+++  L
Sbjct: 365 LGVMTKEG-VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGL 422



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 236/491 (48%), Gaps = 22/491 (4%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS----ICKLGQ 150
           G+ PN+ T +IL+  L    ++  ++ +L ++   G  P++++ TT++        KL +
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKGETRCAIKLPR 65

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL------LCEMVDRGID------- 197
           + E R          S+ +++ N           F+       + ++V   +        
Sbjct: 66  MIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLL 125

Query: 198 ----PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
               P++I +  I+ SL  + +  T++ +  QM V+G  P++ + + L+  +   G+   
Sbjct: 126 MRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAF 185

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           +  +  ++++ G+ PN +  +TL+ GLC  G + +++    ++       N  +Y  L++
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G    A ++   +      P+VV Y  ++  LC++ + ++A+    +M      P
Sbjct: 246 GLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFP 305

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + +T++T I G C  G++  A  LL++M      P++ TY  L+D L +  ++KEA  L+
Sbjct: 306 DVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLL 365

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             + K G++ N+VTY+T++ G C  G V  A Q+   M+         ++NI+I   CK 
Sbjct: 366 GVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKG 425

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             V+ A+ LL  +       P+ ++Y SL+ G+C SG +  A   ++++ + G   +  T
Sbjct: 426 KSVDEAMNLLREMLHKNVV-PNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVIT 484

Query: 554 WNVLVRSLFSN 564
           +  L+  L  N
Sbjct: 485 YTSLLDGLCKN 495



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 5/272 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   + LL  M  EGV  +   + ++++ Y  VG    A ++F+ + +  
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P+V  YN +++ L           +   M    + PN  TYN L+  LCK+ R+  A 
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
            L+ E+ ++G   D ++YT+++  +CK   +++A  L M+    G+      Y ALI+GL
Sbjct: 468 DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++ A  L   ++ +G   +V TY+ +I  LC  G ++ +L +  +M   GC P+ 
Sbjct: 528 CKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDA 587

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +F  +++         +A  L + MI +G L
Sbjct: 588 VTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 276/590 (46%), Gaps = 44/590 (7%)

Query: 31   GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
             VF  +I  Y + G+ + A++ F  +   G KP+V   N IL +++ + R  ++  ++  
Sbjct: 915  SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 974

Query: 91   MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            M   G+ PNV T+NIL+  LC    +  A  LL +M   G  P  V+Y T+++  CK G+
Sbjct: 975  MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034

Query: 151  VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             + A EL          + V  YN  I+ LC  H+  +A+ LL +M    I PN +TY+T
Sbjct: 1035 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 1094

Query: 206  IISSL-----------------------------------CDVGNVETSLGILGQMFVRG 230
            +I+                                     C VG+ E +L +L  M   G
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 1154

Query: 231  CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
               N  ++ +LL G     +   A  L  RM     +   +AY+ LI GLC NG +DEAV
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 1214

Query: 291  SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
             +   M ++   P+V TYS+LI+GF + GN+  A +I  RM  +G   N + Y+ ++   
Sbjct: 1215 QLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274

Query: 351  CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            CQ+    +A  +   M       +  T N  +  LC  G++  A K L  M +   +PN 
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 1334

Query: 411  TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             TY+ +++G   +     AF    ++ KCG   +  TY ++L G+C+ G +VEA + L +
Sbjct: 1335 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 1394

Query: 471  MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
            +      +D++ +N ++   CK G ++ A+ L D++       PD  +Y+SLL G+C  G
Sbjct: 1395 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL-PDSYTYSSLLTGLCRKG 1453

Query: 531  GMQEAFIYLQKMLNEG-ICPNFATWNVLVRSLFSNLGH-LGPVYILDDIM 578
                A       +  G + PN   +  LV  L S  GH     Y  +++M
Sbjct: 1454 KAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL-SKAGHPKAAFYFFEEMM 1502



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 264/552 (47%), Gaps = 5/552 (0%)

Query: 14   VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            V  L ++M  +G+  + G F  +IN     G  ++A  +  ++ E G  PT+  YN +L+
Sbjct: 968  VWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 1027

Query: 74   ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                + R+     +   M   G+E +V TYN+ +  LC N+R   AY LL +M  +  +P
Sbjct: 1028 WYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP 1087

Query: 134  DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
            + V+Y T+++   K G++  A ++               YNALI G C     EEA  LL
Sbjct: 1088 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 1147

Query: 189  CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
              M   G+  N +TY T+++ LC     E +  +L +M V        ++T L+ G    
Sbjct: 1148 DHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKN 1207

Query: 249  GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            G   EA  L   M ++G  P+V+ YS+LI+G C  G++  A  +  +M  +    N   Y
Sbjct: 1208 GMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIY 1267

Query: 309  SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
            S LI  F + GN+  A +++  M  NG   +      +V  LC++    +A   +  M+ 
Sbjct: 1268 STLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 1327

Query: 369  ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
                PN++T++  I G    G    A    D M +    P+  TY  LL GL +   + E
Sbjct: 1328 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 1387

Query: 429  AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
            A + +  +      ++ V YNT+L   C++G + EA  L  KM+      D+ T++ ++ 
Sbjct: 1388 AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 1447

Query: 489  AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
              C++GK   A+ L     G G   P+ + YT L+ G+  +G  + AF + ++M+ +G C
Sbjct: 1448 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 1507

Query: 549  PNFATWNVLVRS 560
            P+   +N ++ S
Sbjct: 1508 PDTVAFNAIIDS 1519



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/590 (25%), Positives = 266/590 (45%), Gaps = 83/590 (14%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            ++I  +  VG  E+AL++   +   GL+     Y  +L+ L    +F +   +   M+ +
Sbjct: 1129 ALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVN 1188

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             M      Y +L+  LCKN  +D A +L+  M   G  PD ++Y+++++  C++G ++ A
Sbjct: 1189 DMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSA 1248

Query: 155  RELAMR-FGSGV------------------------SVY---------------NALING 174
            +E+  R + SG+                         VY               N L++ 
Sbjct: 1249 KEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSS 1308

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            LC++ K+ EA   LC M   G+ PN ITY  II+    +G+   +      M   G +P+
Sbjct: 1309 LCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 1368

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP---NVVAYSTLIHGLCSNGSMDEAVS 291
              ++ SLLKG   GG   EA    NR+    ++P   + V Y+TL+   C +G++ EAV+
Sbjct: 1369 FFTYGSLLKGLCKGGNLVEAKKFLNRL---HYIPGAVDSVMYNTLLAETCKSGNLHEAVA 1425

Query: 292  VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC-SPNVVAYTCMVKVL 350
            +  +M +N+  P+  TYS+L+ G  + G  + A  ++   +  G   PN V YTC+V  L
Sbjct: 1426 LFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGL 1485

Query: 351  CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
             +      A    E+M  +   P+TV FN  I      G++  A      M+ +   PN+
Sbjct: 1486 SKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNL 1545

Query: 411  TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             TYN LL G  +   +     L + + + GI  + +T+++++ G+ ++G+     +LLGK
Sbjct: 1546 ATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGK 1605

Query: 471  MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
            M++EGT  D  TFNI+I  Y + GK                                   
Sbjct: 1606 MIMEGTLADQFTFNILINKYSESGK----------------------------------- 1630

Query: 531  GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             M++AF  +  M   G+ P+  T+N +   L           +L +++ N
Sbjct: 1631 -MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 1679



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/637 (24%), Positives = 282/637 (44%), Gaps = 77/637 (12%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ L +   +D    L+  M  +GV+     + S+IN + RVG  + A ++  R+   G
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            L     IY+ ++         +    +Y+ M  +G   + FT N+L+ +LC++ ++  A 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 121  KLLVEMGNKGCAPDAVSYTTIVS-----------------------------------SI 145
            K L  M   G  P++++Y  I++                                    +
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 146  CKLGQVEEARELAMRF----GSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK G + EA++   R     G+  SV YN L+   CK   + EA  L  +MV   + P+ 
Sbjct: 1380 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TYS++++ LC  G   T++ + G    RG   PN   +T L+ G    G    A   + 
Sbjct: 1440 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             M+++G  P+ VA++ +I      G M +A      M      PN+ TY+ L+ GF+K  
Sbjct: 1500 EMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQ 1559

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             LL    +++ M+  G  P+ + +  ++  L ++ +      L+ KM  E    +  TFN
Sbjct: 1560 ALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFN 1619

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I      G++  A  L++ M      P+  TYN + +GL + +  +E+  ++ E+ + 
Sbjct: 1620 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 1679

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM-------------------LIEGTKLDA 480
            G+      Y T+++G+CR G +  AF+L  +M                   L  G   DA
Sbjct: 1680 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 1739

Query: 481  I----------------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +                TF  +++ +C+  K+  A++L   +   G    D+++Y  L+ 
Sbjct: 1740 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG-LKLDVVAYNVLIM 1798

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C +G    AF   ++M +  +CPN  T+ VLV ++
Sbjct: 1799 GMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1835



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/553 (23%), Positives = 243/553 (43%), Gaps = 19/553 (3%)

Query: 4    KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
            KLGE       +  L  M   G+  +   +  +IN Y  +G    A   F  + + G  P
Sbjct: 1314 KLGE------AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 1367

Query: 64   TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            +   Y  +L  L             + +       +   YN LL   CK+  +  A  L 
Sbjct: 1368 SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 1427

Query: 124  VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS---------VYNALING 174
             +M      PD+ +Y+++++ +C+ G+   A  L   FG+ +          +Y  L++G
Sbjct: 1428 DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCL---FGTAMGRGTLFPNHVMYTCLVDG 1484

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            L K    + AF+   EM+ +G  P+ + ++ II S    G +  +      M   G  PN
Sbjct: 1485 LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 1544

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            + ++  LL G+           L++ M+REG  P+ + + +LI GL  +G  D  V +  
Sbjct: 1545 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 1604

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +M       +  T++ LI+ ++++G +  A  + N M + G  P+   Y  +   L + +
Sbjct: 1605 KMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKS 1664

Query: 355  MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             F ++  ++ +M      P    + T I G+C  G +  A KL D+M+      +    +
Sbjct: 1665 AFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 1724

Query: 415  ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             ++ GLL   + ++A  ++  + +  +   I T+ T++H  CR   + EA +L G M + 
Sbjct: 1725 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1784

Query: 475  GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            G KLD + +N++I   C  G    A +L + +R   +  P+I +Y  L+  I  +  + +
Sbjct: 1785 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMR-HRDLCPNITTYAVLVDAISAANNLIQ 1843

Query: 535  AFIYLQKMLNEGI 547
                L  +   G+
Sbjct: 1844 GEKLLTDLQERGL 1856


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 277/550 (50%), Gaps = 12/550 (2%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           SE    ++I++ R+    +  + +++++    + P     + + ++ +  +  S    + 
Sbjct: 41  SEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVL 100

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG-NKGCA-PDAVSYTTIVSSIC 146
           S M + G   NV+  N++LK  C++ + D A  L  +M  N  C  PD V+Y T+V+  C
Sbjct: 101 SLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFC 160

Query: 147 KLGQVEEAREL--AMRFG----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           K  ++ EAR L  AM+ G      +  Y+ LI+  CK  ++ E   LL EM   G+  +V
Sbjct: 161 KAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADV 220

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             YS++IS+ C  G++ET   +  +M  R  +PN+ +++ L++G    GR  EAS++   
Sbjct: 221 FVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKD 280

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M   G  P+VVAY+ L  GLC NG   +A+ V   M +    P   TY+ +++G  K   
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE--NCPPNTVTF 378
           +  A  +   M+  G  P+ V Y  ++K LC     H+A  L + +  E  +  P+  T 
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I+GLC  GRV  A ++   M +     NI TYN L++G L   ++ EA +L     +
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G   N +TY+ +++G+C+  M+  A  L  KM   G +   I +N ++ + C++  +  
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A  L   +R     N D++S+  ++ G   +G ++ A   L +M    + P+  T+++L+
Sbjct: 521 ARSLFQEMRNVNH-NVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579

Query: 559 RSLFSNLGHL 568
              FS LG L
Sbjct: 580 NR-FSKLGML 588



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 242/480 (50%), Gaps = 8/480 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           +++N + +     +A  +F  +++ G  +P +  Y+ ++D             +   M+R
Sbjct: 154 TLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER 213

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           +G++ +VF Y+ L+ A C    ++   +L  EM  +  +P+ V+Y+ ++  + + G+  E
Sbjct: 214 EGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWRE 273

Query: 154 AREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A E+     A      V  Y  L +GLCK  +  +A  +L  MV +G +P  +TY+ +++
Sbjct: 274 ASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN 333

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-- 266
            LC    ++ + G++  M  +G  P+  ++ +LLKG    G+ HEA DLW  ++ E F  
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+V   + LI GLC  G + +A  +   M E     N+ TY+ LI+G+  A  L+ A +
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK 453

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +W   + +G SPN + Y+ M+  LC+  M   A  L  KM      P  + +N  +  LC
Sbjct: 454 LWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLC 513

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
               ++ A  L  +M+      ++ ++N ++DG L+   VK A EL++E+    +  + V
Sbjct: 514 REDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAV 573

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T++ +++   + GM+ EA  L  KM+  G     + F+ ++  Y  +G+    I LL ++
Sbjct: 574 TFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQM 633



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 253/508 (49%), Gaps = 14/508 (2%)

Query: 15  QYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           + L + MK +G  C   +  +  +I+ Y + G   + L +   +   GLK  V +Y+ ++
Sbjct: 169 RVLFEAMK-KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLI 227

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
            A   E        ++  M R  + PNV TY+ L++ L +  R   A ++L +M  +G  
Sbjct: 228 SAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVR 287

Query: 133 PDAVSYTTIVSSICKLGQVEEA---RELAMRFGS--GVSVYNALINGLCKEHKIEEAFWL 187
           PD V+YT +   +CK G+  +A    +L ++ G   G   YN ++NGLCKE ++++AF +
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGV 347

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI----LGQMFVRGCNPNIHSFTSLLK 243
           +  MV +G  P+ +TY+T++  LC  G +  ++ +    L + F     P++ +  +L++
Sbjct: 348 VEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKF--HVKPDVFTCNNLIQ 405

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G    GR H+A+ + + M+  G   N+V Y+ LI G  +   + EA+ +     E+   P
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  TYS +I+G  K   L  A  ++ +M  +G  P V+ Y  ++  LC+ +   QA SL 
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLF 525

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M   N   + V+FN  I G    G V  A +LL +M   + +P+  T++ L++   ++
Sbjct: 526 QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKL 585

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             + EA  L  ++  CG    +V ++++L G    G   +   LL +M  +   LD+   
Sbjct: 586 GMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLT 645

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + I+   C   +  +  ++L +     E
Sbjct: 646 STILACLCHMSRNLDVEKILPKFSQQSE 673



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 216/440 (49%), Gaps = 13/440 (2%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEAFWL 187
           P   + +T++ ++ K  Q +    +  +  S +     +  +AL       H    AF +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN---PNIHSFTSLLKG 244
           L  M  RG   NV   + ++   C  G  + ++ +  QM  R  +   P+  ++ +L+ G
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNG 158

Query: 245 YLLGGRTHEASDLWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           +    R  EA  L+  M + G   PN+V YS LI   C +G + E + +  +ME      
Sbjct: 159 FCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKA 218

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +V  YS+LI  F   G++    ++++ M+    SPNVV Y+C+++ L +   + +A  ++
Sbjct: 219 DVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEML 278

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           + M      P+ V +     GLC  GR   A+K+LD M Q    P   TYN +++GL + 
Sbjct: 279 KDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKE 338

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG--TKLDAI 481
           +R+ +AF +V  + K G + + VTYNT+L G+C AG + EA  L   +L E    K D  
Sbjct: 339 DRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVF 398

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T N +I   CK+G+V++A ++   +   G    +I++Y  L+ G   +  + EA    + 
Sbjct: 399 TCNNLIQGLCKEGRVHDAARIHSSMVEMG-LQGNIVTYNFLIEGYLAARKLIEALKLWKY 457

Query: 542 MLNEGICPNFATWNVLVRSL 561
            +  G  PN  T++V++  L
Sbjct: 458 AVESGFSPNSMTYSVMINGL 477



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 203/423 (47%), Gaps = 7/423 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I+  + L  +M    VS +   +  ++    R G   +A +M   +   G++P V  Y 
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            + D L    R      +   M + G EP   TYN+++  LCK +R+D A+ ++  M  K
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVY--NALINGLCKEHKIE 182
           G  PDAV+Y T++  +C  G++ EA +     L+ +F     V+  N LI GLCKE ++ 
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A  +   MV+ G+  N++TY+ +I        +  +L +       G +PN  +++ ++
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMI 474

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G         A  L+ +M   G  P V+ Y+ L+  LC   S+++A S+  +M   +  
Sbjct: 475 NGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHN 534

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +V +++ +IDG  KAG++  A ++ + M      P+ V ++ ++    +  M  +A  L
Sbjct: 535 VDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGL 594

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            EKM      P  V F++ +KG    G  +  + LL QM   + + +    + +L  L  
Sbjct: 595 YEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCH 654

Query: 423 VNR 425
           ++R
Sbjct: 655 MSR 657



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 152/302 (50%), Gaps = 7/302 (2%)

Query: 285 SMDEAVSVSYQMEEN--SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           S+ +AVS+ ++  +N  + PP+    S LID   KA        ++++M+S    P   +
Sbjct: 20  SLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTS 79

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            + + +     +    A S++  M       N    N  +KG C  G+ D AM L  QMK
Sbjct: 80  LSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMK 139

Query: 403 Q-YEC-LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRAG 459
           + Y+C +P+  TYN L++G  +  R+ EA  L   ++K G  + N+VTY+ ++   C++G
Sbjct: 140 RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG 199

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            V E   LL +M  EG K D   ++ +I A+C +G +    +L D +    + +P++++Y
Sbjct: 200 EVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEML-RRKVSPNVVTY 258

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           + L+ G+  +G  +EA   L+ M   G+ P+   + VL   L  N G  G    + D+M 
Sbjct: 259 SCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKN-GRAGDAIKVLDLMV 317

Query: 580 NK 581
            K
Sbjct: 318 QK 319


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 279/550 (50%), Gaps = 5/550 (0%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++MK  G   SE  F SVI +    G   +AL++   +   G    + +   ++    
Sbjct: 277 LLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYC 336

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           A+        +++ +  DG+ PN  TY++L++  C +  ++ A +L  +M   G  P   
Sbjct: 337 AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 396

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG-SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           +  +++    K    EEA +L   A+  G + +  YN +++ LCK  K++EA  LL  MV
Sbjct: 397 NVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMV 456

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           ++G+ PNV++Y+ +I   C  GN++ +  +   M  R   PN+ +++ L+ G    G + 
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 516

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A DL+++M+     P    ++T+I+GLC  G M EA        E    P+  TY++++
Sbjct: 517 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 576

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DGF K GN+  A  ++  M   G SPNVV YT ++   C++N    A    ++M  +   
Sbjct: 577 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 636

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            +   ++  I G C    ++ A  L  ++ +    PN   YN ++ G   +N ++ A   
Sbjct: 637 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 696

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++    I  ++ TY T++ G+ + G +V A  L  +ML +G   D ITF++++   C 
Sbjct: 697 YKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 756

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G++ NA ++L+ +       P ++ Y +L+ G    G ++EAF    +ML+ G+ P+  
Sbjct: 757 KGQLENARKILEEM-DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDV 815

Query: 553 TWNVLVRSLF 562
           T+++L+   F
Sbjct: 816 TYDILINGKF 825



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 283/589 (48%), Gaps = 42/589 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V +L+   K         VF  ++N+Y R    E A+  F  +    + P V   N +L 
Sbjct: 134 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 193

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           AL+  N    +  +Y+ M   G+  + FT +++++A  K  RV+ A +   E   +G   
Sbjct: 194 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 253

Query: 134 DAVSYTTIVSSICK-------LGQVEEAREL------------------------AMRFG 162
           DA +Y+ I+ ++CK       L  +EE +E                         A+R  
Sbjct: 254 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 313

Query: 163 S---------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                      + V  +L+ G C +  ++ A  L  ++ + G+ PN +TYS +I   C+ 
Sbjct: 314 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 373

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           GN+E +  +  QM + G  P++ +  SLL+GYL      EAS L++  +  G + N+  Y
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTY 432

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + ++  LC  G MDEA S+   M      PNV +Y+ +I G  + GN+  AS +++ M++
Sbjct: 433 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 492

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               PNVV Y+ ++    +     +A  L ++M   N  P   TFNT I GLC  G++  
Sbjct: 493 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 552

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A   L    +   +P+  TYN ++DG ++   +  A  +  E+ + G+  N+VTY ++++
Sbjct: 553 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 612

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C++  +  A +   +M  +G +LD   ++ +I  +CK+  + +A  L   +   G  +
Sbjct: 613 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG-LS 671

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           P+ I Y S++ G  +   M+ A ++ +KM+N+ I  +  T+  L+  L 
Sbjct: 672 PNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 720



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 200/387 (51%), Gaps = 5/387 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  ++A  +   +   G+ P V  YN ++     +    M + ++S+M    ++PNV TY
Sbjct: 443 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 502

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LA 158
           +IL+    K    + A  L  +M +   AP   ++ TI++ +CK+GQ+ EAR+     L 
Sbjct: 503 SILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE 562

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
             F      YN++++G  KE  I+ A  +  EM + G+ PNV+TY+++I+  C    ++ 
Sbjct: 563 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDL 622

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L    +M  +G   ++ ++++L+ G+        A DL+  ++  G  PN + Y+++I 
Sbjct: 623 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 682

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G     +M+ A+    +M  +  P ++ TY+ LIDG  K G L+ AS ++  M+S G  P
Sbjct: 683 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +++ +  +V  LC       A  ++E+M  +N  P+ + +NT I G    G +  A  L 
Sbjct: 743 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 802

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNR 425
           D+M     +P+  TY+ L++G  + +R
Sbjct: 803 DEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 235/512 (45%), Gaps = 27/512 (5%)

Query: 63  PTVKIY--------NHILDALL--AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           PT +I+        NH++DALL    +  S +        + G    V  Y +LL  L +
Sbjct: 47  PTSQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMR 106

Query: 113 NNRVDG-AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYN 169
           +    G A KLL    +    P  V +            V+     A RF   +   V+N
Sbjct: 107 SPETHGHARKLLNRYVSGDSDPSPVVF------------VDHLINCAKRFDFELDHRVFN 154

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            L+N   + ++IE A      M+ + + P V   + ++++L     +     +  +M +R
Sbjct: 155 YLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLR 214

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G   +  +   +++  L  GR  EA + +      G   +  AYS +I  +C   + +  
Sbjct: 215 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 274

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           + +  +M+E    P+  T++++I      GN++ A ++   MI+ G   N+V  T ++K 
Sbjct: 275 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 334

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C       A +L  K+  +   PN VT++  I+G C  G ++ A +L  QMK     P+
Sbjct: 335 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 394

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +   N LL G L+    +EA +L  E   CG+  NI TYN ++  +C+ G + EA  LL 
Sbjct: 395 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 453

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M+ +G   + +++N +I  +C++G ++ A  +   +    +  P++++Y+ L+ G    
Sbjct: 454 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML-ARDLKPNVVTYSILIDGNFKK 512

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G  ++A     +ML+  I P   T+N ++  L
Sbjct: 513 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 149/311 (47%), Gaps = 5/311 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM    ++ ++  F ++IN   +VG   +A        E G  P+   YN I+D  +
Sbjct: 521 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 580

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E        +Y  M   G+ PNV TY  L+   CK+NR+D A K   EM  KG   D  
Sbjct: 581 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 640

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++   CK   +E A++L       G+S    VYN++I+G    + +E A     +M
Sbjct: 641 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 700

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++  I  ++ TY+T+I  L   G +  +  +  +M  +G  P+I +F  L+ G    G+ 
Sbjct: 701 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 760

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +   M R+   P+V+ Y+TLI G    G++ EA ++  +M +    P+  TY  L
Sbjct: 761 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 820

Query: 312 IDGFAKAGNLL 322
           I+G  K    L
Sbjct: 821 INGKFKGDRSL 831



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 5/246 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    + ++M   GVS +   + S+IN + +    + ALK    +RE GL+  V  Y+ 
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 644

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D             ++  +   G+ PN   YN ++      N ++ A     +M N  
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
              D  +YTT++  + K G++  A +L M   S      +  ++ L+NGLC + ++E A 
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 764

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L EM  + + P+V+ Y+T+I+     GN++ +  +  +M  RG  P+  ++  L+ G 
Sbjct: 765 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGK 824

Query: 246 LLGGRT 251
             G R+
Sbjct: 825 FKGDRS 830



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ +++  Q L  ++   G+S +  V+ S+I+ +R +   E AL  + ++    
Sbjct: 645 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 704

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   +  Y  ++D LL E R    + +Y  M   G+ P++ T+++L+  LC   +++ A 
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 764

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K+L EM  K   P  + Y                              N LI G  +E  
Sbjct: 765 KILEEMDRKNMTPSVLIY------------------------------NTLIAGYFREGN 794

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           ++EAF L  EM+DRG+ P+ +TY  +I+
Sbjct: 795 LKEAFTLHDEMLDRGLVPDDVTYDILIN 822


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 260/532 (48%), Gaps = 6/532 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I +Y +     +A + F  + +  +       N +L  L       +    Y  +
Sbjct: 89  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
                E N +T NI++ + CK    DGA  ++ EM  +   PD V++  ++ +  + G V
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDV 208

Query: 152 EEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A      +A R    G+  YN+++ GLCK  + ++A  +   M    + P+V +++ +
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C VG V+ ++    +M  R   P++ SF+ L+  +   G    A      M   G 
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGL 328

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+ V Y+ +I G C  GSM EA+ V  +M    C P+V TY+ L++G  K   LL A +
Sbjct: 329 VPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK 388

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + N M   G +P++  +T ++   C+   F  A  L + +  +   P+ VT+N+ I G+C
Sbjct: 389 LLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMC 448

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G +  A +L D M   E LPN  TY+ L+D      +V++AF  + E+ K G   NI 
Sbjct: 449 RKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR 508

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TYN+I+ G CR+G V +  Q L KM  +    D ITFN +I+ Y K+  ++ A  + + I
Sbjct: 509 TYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFN-I 567

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
                  PD ++Y  ++ G    G MQ+A    + M + GI P+  T+  L+
Sbjct: 568 MEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI 619



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 251/475 (52%), Gaps = 6/475 (1%)

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           F   + + S M++  + P+V T+N+L+ A  +   VD A  L+  M N+G  P  V+Y +
Sbjct: 173 FDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNS 232

Query: 141 IVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++  +CK  + ++A+E+            V  +N LI G C+  +++EA     EM  R 
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY 292

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+V+++S +I      G ++ +   L +M   G  P+   +T ++ G+   G   EA 
Sbjct: 293 VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            + + M+  G LP+VV Y+TL++GLC    + +A  +  +MEE    P++ T++ LI G+
Sbjct: 353 RVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGY 412

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            + GN   A Q+++ ++     P+VV Y  ++  +C+     +A+ L + M      PN 
Sbjct: 413 CRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNH 472

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           +T++  I   C  G+V+ A   LD+M +   LPNI TYN ++ G  R   VK+  + + +
Sbjct: 473 ITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQK 532

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + +  +  +++T+NT++HG  +   +  AF +   M  E  + DA+T+N+II  + +QG 
Sbjct: 533 MRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGN 592

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           + +A ++   + G     PD  +Y SL+ G   +G  ++AF    +M++ G  P+
Sbjct: 593 MQDAGRVFKGM-GDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 230/458 (50%), Gaps = 6/458 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  +N ++DA            +  +M   G++P + TYN +LK LCK+ R D A ++
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRF-GSGVSVYNALINGLCK 177
              M     APD  S+  ++   C++G+V+EA    +E+  R+    V  ++ LI    +
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +++ A   L EM   G+ P+ + Y+ +I   C  G++  +L +  +M   GC P++ +
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +LL G     R  +A  L N M   G  P++  ++TLIHG C  G+ + A+ +   + 
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P+V TY++LIDG  + G+L  A+++W+ M +    PN + Y+ ++   C+     
Sbjct: 430 RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVE 489

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A   +++M  +   PN  T+N+ IKG C  G V    + L +M+Q    P++ T+N L+
Sbjct: 490 DAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            G ++   +  AF +   +EK  ++ + VTYN I++G    G + +A ++   M   G +
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIE 609

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            D  T+  +I  +   G    A QL D +   G + PD
Sbjct: 610 PDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRG-FAPD 646



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 239/487 (49%), Gaps = 11/487 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+    +  E DG   ++ +M+   V         +I++  R G  + A+ +   +   G
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN +L  L    RF     ++  M +  + P+V ++NIL+   C+   V  A 
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVS----VYNALI 172
           K   EM ++   PD VS++ ++    + G+++ A    RE+    G G+     +Y  +I
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK---GLGLVPDGVIYTMVI 339

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G C+   + EA  +  EMV  G  P+V+TY+T+++ LC    +  +  +L +M  RG  
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ +FT+L+ GY   G    A  L++ ++R+   P+VV Y++LI G+C  G + +A  +
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M      PN  TYS LID   + G +  A    + M+  G  PN+  Y  ++K  C+
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +    +    ++KM  +N  P+ +TFNT I G      +  A  + + M++    P+  T
Sbjct: 520 SGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVT 579

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN +++G      +++A  +   +   GI+ +  TY ++++G   AG   +AFQL  +M+
Sbjct: 580 YNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMI 639

Query: 473 IEGTKLD 479
             G   D
Sbjct: 640 HRGFAPD 646



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 243/489 (49%), Gaps = 41/489 (8%)

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           ++  R +    I S++      P    +++L++   ++ +   A++    + +      A
Sbjct: 63  MSRRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPA 122

Query: 136 VSYTTIVSSICKLG---QVEEARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCE 190
            +   +++ + + G     +EA  L +   S V+ Y  N +++  CK  + + A  ++ E
Sbjct: 123 SASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISE 182

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M  R + P+V+T++ +I +    G+V+ ++ ++  M  R                     
Sbjct: 183 MEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANR--------------------- 221

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
                         G  P +V Y++++ GLC +   D+A  V   M++ S  P+V +++ 
Sbjct: 222 --------------GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI GF + G +  A + +  M     +P+VV+++C++ +  +      A + + +M    
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ V +   I G C  G +  A+++ D+M  + CLP++ TYN LL+GL + +R+ +A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L+ E+E+ G+  ++ T+ T++HG CR G    A QL   +L +  + D +T+N +I   
Sbjct: 388 KLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C++G +  A +L D +    E  P+ I+Y+ L+   C  G +++AF +L +M+ +G  PN
Sbjct: 448 CRKGDLAKANELWDDMHAR-EILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPN 506

Query: 551 FATWNVLVR 559
             T+N +++
Sbjct: 507 IRTYNSIIK 515



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 160/348 (45%), Gaps = 36/348 (10%)

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G  H A + +  ++      N    + ++H  C     D A +V  +ME+    P+V T
Sbjct: 135 AGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVT 194

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ LID   +AG++  A  + + M + G  P +V Y  ++K LC++  F +A  +   M 
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ---------YECL----------- 407
             +  P+  +FN  I G C  G V  A+K   +M+          + CL           
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD 314

Query: 408 ---------------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                          P+   Y  ++ G  R   + EA  +  E+   G   ++VTYNT+L
Sbjct: 315 HAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLL 374

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G+C+   +++A +LL +M   G   D  TF  +I+ YC+QG   NA+QL D +      
Sbjct: 375 NGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ-RL 433

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            PD+++Y SL+ G+C  G + +A      M    I PN  T+++L+ S
Sbjct: 434 RPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 22/364 (6%)

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-------- 264
            GN+   +G +G        P+  +  +        GR  E   L  RM R         
Sbjct: 21  AGNLAIDIGTIG------ARPSTAALAAAATAAAAAGRASECQSLLLRMSRRRGASRREI 74

Query: 265 -------GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
                     P    +  LI     +    EA      + ++  P   +  +AL+   ++
Sbjct: 75  VSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSR 134

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           AG    A + +  ++S+    N      MV   C+   F  A ++I +M      P+ VT
Sbjct: 135 AGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVT 194

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            N  I      G VD A+ L+D M      P I TYN +L GL +  R  +A E+   ++
Sbjct: 195 HNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMD 254

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +C +  ++ ++N ++ G CR G V EA +   +M       D ++F+ +I  + ++G+++
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMD 314

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A   L  ++G G   PD + YT ++ G C +G M EA     +M+  G  P+  T+N L
Sbjct: 315 HAGAYLREMKGLG-LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373

Query: 558 VRSL 561
           +  L
Sbjct: 374 LNGL 377


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 153/528 (28%), Positives = 264/528 (50%), Gaps = 11/528 (2%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF ++ +    +G+ E+A++ F +++ F + P  +  N +L       +   +   + +
Sbjct: 61  GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G  P VFTYNI++  +CK   V+ A  L  EM  +G  PD V+Y +++    K+G+
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 151 V-------EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           +       EE +++       V  YNALIN  CK  K+        EM   G+ PNV++Y
Sbjct: 181 LDDTVCFFEEMKDMCCE--PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 238

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           ST++ + C  G ++ ++     M   G  PN +++TSL+      G   +A  L N M++
Sbjct: 239 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 298

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G   NVV Y+ LI GLC    M EA  +  +M+     PN+ +Y+ALI GF KA N+  
Sbjct: 299 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A ++ N +   G  P+++ Y   +  LC       A  ++ +M       N++ + T + 
Sbjct: 359 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 418

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQ 442
                G     + LLD+MK+ +    + T+  L+DGL +   V +A +    I    G+Q
Sbjct: 419 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 478

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N   +  ++ G+C+   V  A  L  +M+ +G   D   +  ++    KQG V  A+ L
Sbjct: 479 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 538

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            D++   G    D+++YTSL+WG+ +   +Q+A  +L++M+ EGI P+
Sbjct: 539 RDKMAEIG-MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 6/487 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P    ++ L   L     ++ A +   +M      P   S   ++    KLG+ ++ +  
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 158 AMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                G+G    V  YN +I+ +CKE  +E A  L  EM  RG+ P+ +TY+++I     
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           VG ++ ++    +M    C P++ ++ +L+  +   G+     + +  M   G  PNVV+
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTL+   C  G M +A+     M      PN  TY++LID   K GNL  A ++ N M+
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   NVV YT ++  LC      +A  L  KM      PN  ++N  I G      +D
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++LL+++K     P++  Y   + GL  + +++ A  ++ E+++CGI+ N + Y T++
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 417

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
               ++G   E   LL +M     ++  +TF ++I   CK   V+ A+   +RI      
Sbjct: 418 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL 477

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
             +   +T+++ G+C    ++ A    ++M+ +G+ P+   +  L+   F   G++    
Sbjct: 478 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ-GNVLEAL 536

Query: 573 ILDDIMA 579
            L D MA
Sbjct: 537 ALRDKMA 543



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 244/508 (48%), Gaps = 6/508 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +  +  + D V+   + M   G   +   +  +I+   + G  E A  +F  ++  G
Sbjct: 101 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 160

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++D      R       +  MK    EP+V TYN L+   CK  ++    
Sbjct: 161 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 220

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGL 175
           +   EM   G  P+ VSY+T+V + CK G +++A +  +   R G       Y +LI+  
Sbjct: 221 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 280

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + +AF L  EM+  G++ NV+TY+ +I  LCD   ++ +  + G+M   G  PN+
Sbjct: 281 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 340

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ G++       A +L N +   G  P+++ Y T I GLCS   ++ A  V  +
Sbjct: 341 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 400

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E     N   Y+ L+D + K+GN      + + M        VV +  ++  LC+N +
Sbjct: 401 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 460

Query: 356 FHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +A     +++ +     N   F   I GLC   +V+ A  L +QM Q   +P+ T Y 
Sbjct: 461 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 520

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG  +   V EA  L  ++ + G++L+++ Y +++ G+     + +A   L +M+ E
Sbjct: 521 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 580

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           G   D +    ++  + + G ++ A++L
Sbjct: 581 GIHPDEVLCISVLKKHYELGCIDEAVEL 608



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 230/509 (45%), Gaps = 60/509 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           MI+  G+   +D      ++MK   + C   V  + ++IN + + G     L+ +  ++ 
Sbjct: 171 MIDGFGKVGRLDDTVCFFEEMK--DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 228

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            GLKP V  Y+ ++DA   E         Y +M+R G+ PN +TY  L+ A CK   +  
Sbjct: 229 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 288

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           A++L  EM   G   + V+YT ++  +C   +++EA EL  +  +      ++ YNALI+
Sbjct: 289 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIH 348

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K   ++ A  LL E+  RGI P+++ Y T I  LC +  +E +  ++ +M   G   
Sbjct: 349 GFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKA 408

Query: 234 NIHSFTSLLKGYLLGGRTHE-----------------------------------ASDLW 258
           N   +T+L+  Y   G   E                                   A D +
Sbjct: 409 NSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYF 468

Query: 259 NRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           NR+  + G   N   ++ +I GLC +  ++ A ++  QM +    P+ T Y++L+DG  K
Sbjct: 469 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 528

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            GN+L A  + ++M   G   +++AYT +V  L   N   +A S +E+M  E   P+ V 
Sbjct: 529 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 588

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYE--------CLPNITTYNELLDGLLRVNRVKEA 429
             + +K     G +D A++L   + +++         LPNI +   L+         +E 
Sbjct: 589 CISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNALPNIYSDQNLVSS-------REH 641

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            E  T I     +L +  Y   +H + R 
Sbjct: 642 EEQETRISNLQPKLLLGIYKLAIHRLIRG 670



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 165/333 (49%), Gaps = 6/333 (1%)

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASD-LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           C    +   S+LK  +L     +  D LW+   R   +P    +  L   L   G ++EA
Sbjct: 22  CARMYYDANSVLKEMVLSKADCDVFDVLWS--TRNVCVPGFGVFDALFSVLIDLGMLEEA 79

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +    +M+     P   + + L+  FAK G      + +  MI  G  P V  Y  M+  
Sbjct: 80  IQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDC 139

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           +C+      A  L E+M F    P+TVT+N+ I G    GR+D  +   ++MK   C P+
Sbjct: 140 MCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPD 199

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           + TYN L++   +  ++    E   E++  G++ N+V+Y+T++   C+ GM+ +A +   
Sbjct: 200 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 259

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICN 528
            M   G   +  T+  +I A CK G +++A +L +  ++ G EWN  +++YT+L+ G+C+
Sbjct: 260 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN--VVTYTALIDGLCD 317

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  M+EA     KM   G+ PN A++N L+   
Sbjct: 318 AERMKEAEELFGKMDTAGVIPNLASYNALIHGF 350


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 256/494 (51%), Gaps = 7/494 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F+R+      P +  +  +L ++     +S +  +   M   G+ P+V+T  I+
Sbjct: 38  DDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIV 97

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C  NRVD A  +L ++   G  PD  ++TT+V  +C +G++ EA ++  +     F
Sbjct: 98  INSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGF 157

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  L+NGLCK+ ++ EA  L  EM+ +GI P++ TY+++I +LC++   +    
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M      PN+ S   ++      G+  EA D+ + MI+ G  P+VV Y+ L+ G C
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHC 277

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               MDEAV V   M  N C  NV +Y+ LI+G+ K   +  A  ++  M      PN +
Sbjct: 278 LRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTM 337

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++  LC       A +L  +M      PN VT++  +  LC   R+  AM LL  +
Sbjct: 338 TYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAI 397

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +     P++  YN  +DG+ R   ++ A +L + +   G+Q ++ T+N ++ G+C+ G++
Sbjct: 398 EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLL 457

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA +L  +M   G   +  T+N I     +  K + AIQLL+ +   G ++ D +S T+
Sbjct: 458 DEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG-FSAD-VSTTA 515

Query: 522 LLWGICNSGGMQEA 535
           LL  + +  G+ ++
Sbjct: 516 LLVKMLSDDGLDQS 529



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 235/473 (49%), Gaps = 10/473 (2%)

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVYN- 169
           N +D A      M +    P    +  +++SI K+        L+ +   FG    VY  
Sbjct: 35  NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94

Query: 170 -ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
             +IN  C  ++++ A  +L +++  G  P+  T++T++  LC VG +  +L +  +M  
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  PN+ ++ +L+ G     +  EA +L++ MI +G  P++  Y++LIH LC+      
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             ++  +M ++   PNV + + ++D   K G +  A  + + MI  G  P+VV Y  ++ 
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C  +   +A  + + M    C  N V++NT I G C   R+D AM L ++M + E +P
Sbjct: 275 GHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIP 334

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  TY+ L+ GL  V R+++A  L  E+  CG   N+VTY+ +L  +C+   + EA  LL
Sbjct: 335 NTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALL 394

Query: 469 GKMLIEGTKLD--AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
               IEG+ LD     +NI I   C+ G +  A  L   +   G   PD+ ++  ++ G+
Sbjct: 395 KA--IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG-LQPDVWTHNIMIRGL 451

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           C  G + EA    ++M   G   N  T+N + + L  N      + +L++++A
Sbjct: 452 CKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLA 504



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 196/401 (48%), Gaps = 12/401 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ K+GE  ++        +M  EG   +   + +++N   +     +AL +F  +   G
Sbjct: 138 VVGKIGEALDV------FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKG 191

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  YN ++ AL     +  +  + + M +  + PNV + NI++ ALCK  +V  A+
Sbjct: 192 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAH 251

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGL 175
            ++  M   G  PD V+Y  ++   C   +++EA    ++ +R G    V  YN LING 
Sbjct: 252 DVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGY 311

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +I++A +L  EM  + + PN +TYST+I  LC VG ++ ++ +  +M   G  PN+
Sbjct: 312 CKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNL 371

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++ LL       R  EA  L   +      P+V  Y+  I G+C  G ++ A  +   
Sbjct: 372 VTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSN 431

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+V T++ +I G  K G L  AS+++  M  NGC  N   Y  + + L QNN 
Sbjct: 432 LAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNK 491

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             +A  L+E+M       +  T    +K L   G +D ++K
Sbjct: 492 TSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG-LDQSVK 531



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 64/145 (44%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ ++   +     V+   I+   R G  E A  +F  +   GL+P V  +N ++  L 
Sbjct: 393 LLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLC 452

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                   + ++  M  +G   N  TYN + + L +NN+   A +LL EM  +G + D  
Sbjct: 453 KRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVS 512

Query: 137 SYTTIVSSICKLGQVEEARELAMRF 161
           +   +V  +   G  +  +++   F
Sbjct: 513 TTALLVKMLSDDGLDQSVKQILCEF 537


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 253/495 (51%), Gaps = 31/495 (6%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           +F  ++ +Y  +    +AL+ FY I+E G  P ++  N +L   L  NR  M   +Y+ M
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R  +  +++T+NI++  LCK  ++  A + +  M   G  P+ V+              
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVT-------------- 253

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                           YN +I+G C   K + A  +   M D+G++P+  TY++ IS LC
Sbjct: 254 ----------------YNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLC 297

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G +E + G++ +M   G  PN  ++ +L+ GY   G   +A    + MI +G + ++V
Sbjct: 298 KEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLV 357

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+  IH L   G M +A ++  +M E    P+  T++ LI+G+ + G+   A  + + M
Sbjct: 358 TYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEM 417

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  G  P +V YT ++ VL + N   +A +L  K+  E   P+ + FN  I G C  G +
Sbjct: 418 VGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNI 477

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A +LL +M   + LP+  TYN L+ G  R  +V+EA +L+ E+++ GI+ + ++YNT+
Sbjct: 478 DRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTL 537

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G  + G + +AF++  +M+  G     +T+N +I   CK  +  +A +LL  +   G 
Sbjct: 538 ISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG- 596

Query: 512 WNPDIISYTSLLWGI 526
             PD  +Y S++  +
Sbjct: 597 ITPDDSTYLSIIEAM 611



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/530 (27%), Positives = 268/530 (50%), Gaps = 10/530 (1%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           N    + LA  +L +    R    KP++ +   ++ +    NR ++ + +   + RD ++
Sbjct: 86  NHPHSLDLATSSLAICVLYRLPSPKPSINLIQRLILSPTCTNR-TIFDEL--ALARDRVD 142

Query: 98  PNV-FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE---- 152
                 +++L++A C+  + + A +    +  KG  P+  +   ++S   KL + +    
Sbjct: 143 AKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWV 202

Query: 153 -EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             A    M   S +  +N +IN LCKE K+++A   +  M   G+ PNV+TY+TII   C
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G  + +  I   M  +G  P+ +++ S + G    GR  EAS L  +M+  G +PN V
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ LI G C+ G +D+A +   +M       ++ TY+  I      G +  A  +   M
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G  P+ V +  ++   C+     +A  L+++M  +   P  VT+ + I  L    R+
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRM 442

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  L  +++Q   LP+I  +N L+DG      +  AF+L+ E++   +  + +TYNT+
Sbjct: 443 KEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL 502

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G CR G V EA QLL +M   G K D I++N +I  Y K+G + +A ++ D +   G 
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG- 561

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++P I++Y +L+ G+C +   + A   L++M+++GI P+ +T+  ++ ++
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 234/465 (50%), Gaps = 9/465 (1%)

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AM 159
           ++L   C N  +   +  L    ++  A   + +  +V + C+L +  EA E        
Sbjct: 119 LILSPTCTNRTI---FDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEK 175

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
            F   +   N +++   K ++ + A+ L  EM    I  ++ T++ +I+ LC  G ++ +
Sbjct: 176 GFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKA 235

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
              +G M   G  PN+ ++ +++ G+ L G+   A  ++  M  +G  P+   Y++ I G
Sbjct: 236 KEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISG 295

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G ++EA  +  +M E    PN  TY+ALIDG+   G+L  A    + MIS G   +
Sbjct: 296 LCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMAS 355

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           +V Y   +  L        A ++I++M  +   P+ VT N  I G C CG    A  LLD
Sbjct: 356 LVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLD 415

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M      P + TY  L+  L + NR+KEA  L ++I++ G+  +I+ +N ++ G C  G
Sbjct: 416 EMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANG 475

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  AFQLL +M       D IT+N ++  YC++GKV  A QLLD ++  G   PD ISY
Sbjct: 476 NIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG-IKPDHISY 534

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +L+ G    G M++AF    +M+  G  P   T+N L++ L  N
Sbjct: 535 NTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKN 579



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 218/418 (52%), Gaps = 9/418 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M    +  S   F  +IN   + G  ++A +    +   G+KP V  YN I+    
Sbjct: 203 LYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +F     I+  MK  G+EP+ +TYN  +  LCK  R++ A  L+ +M   G  P+AV
Sbjct: 263 LRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAV 322

Query: 137 SYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++   C  G +++A   R+  +  G  + +  YN  I+ L  E ++ +A  ++ EM
Sbjct: 323 TYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            ++G+ P+ +T++ +I+  C  G+ + + G+L +M  +G  P + ++TSL+  Y+LG R 
Sbjct: 383 REKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI--YVLGKRN 440

Query: 252 H--EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              EA  L++++ +EG LP+++ ++ LI G C+NG++D A  +  +M+     P+  TY+
Sbjct: 441 RMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYN 500

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+ G+ + G +  A Q+ + M   G  P+ ++Y  ++    +      A  + ++M   
Sbjct: 501 TLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTT 560

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
              P  +T+N  I+GLC     + A +LL +M      P+ +TY  +++ +  V+ ++
Sbjct: 561 GFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLE 618



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 192/392 (48%), Gaps = 9/392 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L ++ ++   +  +  M+  GV  +   + ++I+ +   G  ++A  +F  +++ G
Sbjct: 222 MINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKG 281

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P    YN  +  L  E R    + +   M   G+ PN  TYN L+   C    +D AY
Sbjct: 282 LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAY 341

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQ-------VEEARELAMRFGSGVSVYNALIN 173
               EM +KG     V+Y   + ++   G+       ++E RE  M        +N LIN
Sbjct: 342 AYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM--PDAVTHNILIN 399

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G C+    + AF LL EMV +GI P ++TY+++I  L     ++ +  +  ++   G  P
Sbjct: 400 GYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLP 459

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +I  F +L+ G+   G    A  L   M     LP+ + Y+TL+ G C  G ++EA  + 
Sbjct: 460 DIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLL 519

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+     P+  +Y+ LI G++K G++  A ++ + M++ G  P ++ Y  +++ LC+N
Sbjct: 520 DEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKN 579

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
                A  L+++M  +   P+  T+ + I+ +
Sbjct: 580 QEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 148/294 (50%), Gaps = 5/294 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+ Y   G  ++A      +   G+  ++  YN  + AL  E R    + +   M+  
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           GM P+  T+NIL+   C+      A+ LL EM  KG  P  V+YT+++  + K  +++EA
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L  +         + V+NALI+G C    I+ AF LL EM +  + P+ ITY+T++  
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  G VE +  +L +M  RG  P+  S+ +L+ GY   G   +A  + + M+  GF P 
Sbjct: 506 YCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPT 565

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           ++ Y+ LI GLC N   + A  +  +M      P+ +TY ++I+      +L G
Sbjct: 566 ILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEG 619


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 270/572 (47%), Gaps = 42/572 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+  +I  Y R G+ + +L++F  +  +G  P+V   N IL +++       +      M
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            +  + P+V T+NIL+  LC     + +  L+ +M   G AP  V+Y T++   CK G+ 
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A EL     S      V  YN LI+ LC+ ++I + + LL +M  R I PN +TY+T+
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+   + G V  +  +L +M   G +PN  +F +L+ G++  G   EA  ++  M  +G 
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404

Query: 267 LPNVVAYSTL-----------------------------------IHGLCSNGSMDEAVS 291
            P+ V+Y  L                                   I GLC NG +DEAV 
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M ++   P++ TYSALI+GF K G    A +I  R+   G SPN + Y+ ++   C
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  + E M  E    +  TFN  +  LC  G+V  A + +  M     LPN  
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +++ L++G        +AF +  E+ K G      TY ++L G+C+ G + EA + L  +
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
                 +D + +N ++ A CK G +  A+ L   +       PD  +YTSL+ G+C  G 
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL-PDSYTYTSLISGLCRKGK 703

Query: 532 MQEAFIYLQKMLNEG-ICPNFATWNVLVRSLF 562
              A ++ ++    G + PN   +   V  +F
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 735



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 261/560 (46%), Gaps = 6/560 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V   L++M    +      F  +IN     G  E++  +  ++ + G  PT+  YN +L 
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               + RF     +  +MK  G++ +V TYN+L+  LC++NR+   Y LL +M  +   P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336

Query: 134 DAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLL 188
           + V+Y T+++     G+V  A +L    + FG   +   +NALI+G   E   +EA  + 
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M  +G+ P+ ++Y  ++  LC     + + G   +M   G      ++T ++ G    
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L N M ++G  P++V YS LI+G C  G    A  +  ++      PN   Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI    + G L  A +I+  MI  G + +   +  +V  LC+     +A   +  M  
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PNTV+F+  I G    G    A  + D+M +    P   TY  LL GL +   ++E
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 636

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A + +  +      ++ V YNT+L  +C++G + +A  L G+M+      D+ T+  +I 
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C++GK   AI         G   P+ + YT  + G+  +G  +    + ++M N G  
Sbjct: 697 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 756

Query: 549 PNFATWNVLVRSLFSNLGHL 568
           P+  T N ++   +S +G +
Sbjct: 757 PDIVTTNAMIDG-YSRMGKI 775



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 274/620 (44%), Gaps = 75/620 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M   G+S +   F ++I+ +   G  ++ALKMFY +   GL P+   Y  +LD L 
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F +    Y  MKR+G+     TY  ++  LCKN  +D A  LL EM   G  PD V
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 479

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----------------------------- 166
           +Y+ +++  CK+G+ + A+E+  R +  G+S                             
Sbjct: 480 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 539

Query: 167 ----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      +N L+  LCK  K+ EA   +  M   GI PN +++  +I+   + G  
Sbjct: 540 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 599

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +  +M   G +P   ++ SLLKG   GG   EA      +       + V Y+TL
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 659

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG- 335
           +  +C +G++ +AVS+  +M + S  P+  TY++LI G  + G  + A        + G 
Sbjct: 660 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 719

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN V YTC V  + +   +       E+M      P+ VT N  I G    G+++   
Sbjct: 720 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 779

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LL +M      PN+TTYN LL G  +   V  +F L   I   GI  + +T ++++ G+
Sbjct: 780 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 839

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----- 510
           C + M+    ++L   +  G ++D  TFN++I   C  G++N A  L+  +   G     
Sbjct: 840 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899

Query: 511 -----------------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
                                          +P+   Y  L+ G+C  G ++ AF+  ++
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 959

Query: 542 MLNEGICPNFATWNVLVRSL 561
           M+   ICP     + +VR+L
Sbjct: 960 MIAHKICPPNVAESAMVRAL 979



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 266/554 (48%), Gaps = 7/554 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+   +  +E  + ++IN +   G    A ++   +  FGL P    +N ++D  +
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +E  F     ++  M+  G+ P+  +Y +LL  LCKN   D A    + M   G     +
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 444

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +CK G ++EA  L            +  Y+ALING CK  + + A  ++C +
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PN I YST+I + C +G ++ ++ I   M + G   +  +F  L+      G+ 
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +    M  +G LPN V++  LI+G  ++G   +A SV  +M +    P   TY +L
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  K G+L  A +    + +   + + V Y  ++  +C++    +A SL  +M   + 
Sbjct: 625 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 684

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+ + I GLC  G+   A+    + + +   LPN   Y   +DG+ +  + K   
Sbjct: 685 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
               +++  G   +IVT N ++ G  R G + +   LL +M  +    +  T+NI+++ Y
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K+  V+ +  L   I   G   PD ++  SL+ GIC S  ++     L+  +  G+  +
Sbjct: 805 SKRKDVSTSFLLYRSIILNGIL-PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 863

Query: 551 FATWNVLVRSLFSN 564
             T+N+L+    +N
Sbjct: 864 RYTFNMLISKCCAN 877



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 265/585 (45%), Gaps = 42/585 (7%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
            YL+Q+M+  G + +   + +V++ Y + G  + A+++   ++  G+   V  YN ++  
Sbjct: 253 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 312

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-------- 126
           L   NR +    +  +M++  + PN  TYN L+       +V  A +LL EM        
Sbjct: 313 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 372

Query: 127 --------------GN-------------KGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
                         GN             KG  P  VSY  ++  +CK  + + AR   M
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 432

Query: 160 RFG-SGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R   +GV V    Y  +I+GLCK   ++EA  LL EM   GIDP+++TYS +I+  C VG
Sbjct: 433 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             +T+  I+ +++  G +PN   +++L+      G   EA  ++  MI EG   +   ++
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 552

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L+  LC  G + EA      M  +   PN  ++  LI+G+  +G  L A  +++ M   
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P    Y  ++K LC+     +A   ++ +       +TV +NT +  +C  G +  A
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILH 453
           + L  +M Q   LP+  TY  L+ GL R  +   A     E E  G  L N V Y   + 
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 732

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+ +AG          +M   G   D +T N +I  Y + GK+     LL  + G     
Sbjct: 733 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGG 791

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           P++ +Y  LL G      +  +F+  + ++  GI P+  T + LV
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 240/485 (49%), Gaps = 27/485 (5%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           N   Y+IL++   +   +  + ++   MG  G  P   +   I+ S+ K G+        
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 155 -RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              L  +    V+ +N LIN LC E   E++ +L+ +M   G  P ++TY+T++   C  
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLL----------KGYLLGGRTHEASDLWNRMIR 263
           G  + ++ +L  M  +G + ++ ++  L+          KGYLL        D+  RMI 
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL------LRDMRKRMIH 335

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
               PN V Y+TLI+G  + G +  A  +  +M      PN  T++ALIDG    GN   
Sbjct: 336 ----PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++  M + G +P+ V+Y  ++  LC+N  F  A     +M         +T+   I 
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G +D A+ LL++M +    P+I TY+ L++G  +V R K A E+V  I + G+  
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N + Y+T+++  CR G + EA ++   M++EG   D  TFN+++ + CK GKV  A + +
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             +   G   P+ +S+  L+ G  NSG   +AF    +M   G  P F T+  L++ L  
Sbjct: 572 RCMTSDGIL-PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630

Query: 564 NLGHL 568
             GHL
Sbjct: 631 G-GHL 634



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 158/656 (24%), Positives = 278/656 (42%), Gaps = 78/656 (11%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI+ L +   +D    LL +M  +G+      + ++IN + +VG  + A ++  RI   G
Sbjct: 449  MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---- 116
            L P   IY+ ++              IY  M  +G   + FT+N+L+ +LCK  +V    
Sbjct: 509  LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568

Query: 117  --------DG-----------------------AYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                    DG                       A+ +  EM   G  P   +Y +++  +
Sbjct: 569  EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628

Query: 146  CKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK G + EA +      A+       +YN L+  +CK   + +A  L  EMV R I P+ 
Sbjct: 629  CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY+++IS LC  G    ++    +   RG   PN   +T  + G    G+         
Sbjct: 689  YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 748

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +M   G  P++V  + +I G    G +++   +  +M   +  PN+TTY+ L+ G++K  
Sbjct: 749  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            ++  +  ++  +I NG  P+ +    +V  +C++NM      +++         +  TFN
Sbjct: 809  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I   C  G ++WA  L+  M       +  T + ++  L R +R +E+  ++ E+ K 
Sbjct: 869  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM------------------LIEGTKLDAI 481
            GI      Y  +++G+CR G +  AF +  +M                  L +  K D  
Sbjct: 929  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988

Query: 482  T-----------------FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            T                 F  +++  CK G V  A++L   +   G    D++SY  L+ 
Sbjct: 989  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLIT 1047

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN-LGHLGPVYILDDIMA 579
            G+C  G M  AF   ++M  +G   N  T+  L+R L +      G   IL D++A
Sbjct: 1048 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1103



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 1/330 (0%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           R CN N   +  L++ YL  G   ++ +++  M   GF P+V   + ++  +  +G    
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             S   +M +    P+V T++ LI+     G+   +S +  +M  +G +P +V Y  ++ 
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C+   F  A  L++ M  +    +  T+N  I  LC   R+     LL  M++    P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  TYN L++G     +V  A +L+ E+   G+  N VT+N ++ G    G   EA ++ 
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G     +++ +++   CK  + + A     R++  G      I+YT ++ G+C 
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR-ITYTGMIDGLCK 455

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +G + EA + L +M  +GI P+  T++ L+
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 270/572 (47%), Gaps = 42/572 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+  +I  Y R G+ + +L++F  +  +G  P+V   N IL +++       +      M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            +  + P+V T+NIL+  LC     + +  L+ +M   G AP  V+Y T++   CK G+ 
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A EL     S      V  YN LI+ LC+ ++I + + LL +M  R I PN +TY+T+
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+   + G V  +  +L +M   G +PN  +F +L+ G++  G   EA  ++  M  +G 
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 267 LPNVVAYSTL-----------------------------------IHGLCSNGSMDEAVS 291
            P+ V+Y  L                                   I GLC NG +DEAV 
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M ++   P++ TYSALI+GF K G    A +I  R+   G SPN + Y+ ++   C
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  + E M  E    +  TFN  +  LC  G+V  A + +  M     LPN  
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +++ L++G        +AF +  E+ K G      TY ++L G+C+ G + EA + L  +
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
                 +D + +N ++ A CK G +  A+ L   +       PD  +YTSL+ G+C  G 
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL-PDSYTYTSLISGLCRKGK 663

Query: 532 MQEAFIYLQKMLNEG-ICPNFATWNVLVRSLF 562
              A ++ ++    G + PN   +   V  +F
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 261/560 (46%), Gaps = 6/560 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V   L++M    +      F  +IN     G  E++  +  ++ + G  PT+  YN +L 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               + RF     +  +MK  G++ +V TYN+L+  LC++NR+   Y LL +M  +   P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 134 DAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLL 188
           + V+Y T+++     G+V  A +L    + FG   +   +NALI+G   E   +EA  + 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M  +G+ P+ ++Y  ++  LC     + + G   +M   G      ++T ++ G    
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L N M ++G  P++V YS LI+G C  G    A  +  ++      PN   Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI    + G L  A +I+  MI  G + +   +  +V  LC+     +A   +  M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PNTV+F+  I G    G    A  + D+M +    P   TY  LL GL +   ++E
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A + +  +      ++ V YNT+L  +C++G + +A  L G+M+      D+ T+  +I 
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C++GK   AI         G   P+ + YT  + G+  +G  +    + ++M N G  
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716

Query: 549 PNFATWNVLVRSLFSNLGHL 568
           P+  T N ++   +S +G +
Sbjct: 717 PDIVTTNAMIDG-YSRMGKI 735



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 274/620 (44%), Gaps = 75/620 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M   G+S +   F ++I+ +   G  ++ALKMFY +   GL P+   Y  +LD L 
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F +    Y  MKR+G+     TY  ++  LCKN  +D A  LL EM   G  PD V
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 439

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----------------------------- 166
           +Y+ +++  CK+G+ + A+E+  R +  G+S                             
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499

Query: 167 ----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      +N L+  LCK  K+ EA   +  M   GI PN +++  +I+   + G  
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +  +M   G +P   ++ SLLKG   GG   EA      +       + V Y+TL
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG- 335
           +  +C +G++ +AVS+  +M + S  P+  TY++LI G  + G  + A        + G 
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN V YTC V  + +   +       E+M      P+ VT N  I G    G+++   
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 739

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LL +M      PN+TTYN LL G  +   V  +F L   I   GI  + +T ++++ G+
Sbjct: 740 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----- 510
           C + M+    ++L   +  G ++D  TFN++I   C  G++N A  L+  +   G     
Sbjct: 800 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 859

Query: 511 -----------------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
                                          +P+   Y  L+ G+C  G ++ AF+  ++
Sbjct: 860 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 919

Query: 542 MLNEGICPNFATWNVLVRSL 561
           M+   ICP     + +VR+L
Sbjct: 920 MIAHKICPPNVAESAMVRAL 939



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 148/570 (25%), Positives = 273/570 (47%), Gaps = 8/570 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+   +  +E  + ++IN +   G    A ++   +  FGL P    +N ++D  +
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +E  F     ++  M+  G+ P+  +Y +LL  LCKN   D A    + M   G     +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +CK G ++EA  L            +  Y+ALING CK  + + A  ++C +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PN I YST+I + C +G ++ ++ I   M + G   +  +F  L+      G+ 
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +    M  +G LPN V++  LI+G  ++G   +A SV  +M +    P   TY +L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  K G+L  A +    + +   + + V Y  ++  +C++    +A SL  +M   + 
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+ + I GLC  G+   A+    + + +   LPN   Y   +DG+ +  + K   
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
               +++  G   +IVT N ++ G  R G + +   LL +M  +    +  T+NI+++ Y
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K+  V+ +  L   I   G   PD ++  SL+ GIC S  ++     L+  +  G+  +
Sbjct: 765 SKRKDVSTSFLLYRSIILNGIL-PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             T+N+L+    +N G +   + L  +M +
Sbjct: 824 RYTFNMLISKCCAN-GEINWAFDLVKVMTS 852



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 265/585 (45%), Gaps = 42/585 (7%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
            YL+Q+M+  G + +   + +V++ Y + G  + A+++   ++  G+   V  YN ++  
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-------- 126
           L   NR +    +  +M++  + PN  TYN L+       +V  A +LL EM        
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332

Query: 127 --------------GN-------------KGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
                         GN             KG  P  VSY  ++  +CK  + + AR   M
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392

Query: 160 RFG-SGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R   +GV V    Y  +I+GLCK   ++EA  LL EM   GIDP+++TYS +I+  C VG
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             +T+  I+ +++  G +PN   +++L+      G   EA  ++  MI EG   +   ++
Sbjct: 453 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L+  LC  G + EA      M  +   PN  ++  LI+G+  +G  L A  +++ M   
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 572

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P    Y  ++K LC+     +A   ++ +       +TV +NT +  +C  G +  A
Sbjct: 573 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 632

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILH 453
           + L  +M Q   LP+  TY  L+ GL R  +   A     E E  G  L N V Y   + 
Sbjct: 633 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 692

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+ +AG          +M   G   D +T N +I  Y + GK+     LL  + G     
Sbjct: 693 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGG 751

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           P++ +Y  LL G      +  +F+  + ++  GI P+  T + LV
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 240/485 (49%), Gaps = 27/485 (5%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           N   Y+IL++   +   +  + ++   MG  G  P   +   I+ S+ K G+        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 155 -RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              L  +    V+ +N LIN LC E   E++ +L+ +M   G  P ++TY+T++   C  
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLL----------KGYLLGGRTHEASDLWNRMIR 263
           G  + ++ +L  M  +G + ++ ++  L+          KGYLL        D+  RMI 
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL------LRDMRKRMIH 295

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
               PN V Y+TLI+G  + G +  A  +  +M      PN  T++ALIDG    GN   
Sbjct: 296 ----PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++  M + G +P+ V+Y  ++  LC+N  F  A     +M         +T+   I 
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G +D A+ LL++M +    P+I TY+ L++G  +V R K A E+V  I + G+  
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N + Y+T+++  CR G + EA ++   M++EG   D  TFN+++ + CK GKV  A + +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             +   G   P+ +S+  L+ G  NSG   +AF    +M   G  P F T+  L++ L  
Sbjct: 532 RCMTSDGIL-PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 564 NLGHL 568
             GHL
Sbjct: 591 G-GHL 594



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 158/656 (24%), Positives = 278/656 (42%), Gaps = 78/656 (11%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI+ L +   +D    LL +M  +G+      + ++IN + +VG  + A ++  RI   G
Sbjct: 409  MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---- 116
            L P   IY+ ++              IY  M  +G   + FT+N+L+ +LCK  +V    
Sbjct: 469  LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 117  --------DG-----------------------AYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                    DG                       A+ +  EM   G  P   +Y +++  +
Sbjct: 529  EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 146  CKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK G + EA +      A+       +YN L+  +CK   + +A  L  EMV R I P+ 
Sbjct: 589  CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY+++IS LC  G    ++    +   RG   PN   +T  + G    G+         
Sbjct: 649  YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +M   G  P++V  + +I G    G +++   +  +M   +  PN+TTY+ L+ G++K  
Sbjct: 709  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            ++  +  ++  +I NG  P+ +    +V  +C++NM      +++         +  TFN
Sbjct: 769  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I   C  G ++WA  L+  M       +  T + ++  L R +R +E+  ++ E+ K 
Sbjct: 829  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM------------------LIEGTKLDAI 481
            GI      Y  +++G+CR G +  AF +  +M                  L +  K D  
Sbjct: 889  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 482  T-----------------FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            T                 F  +++  CK G V  A++L   +   G    D++SY  L+ 
Sbjct: 949  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLIT 1007

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN-LGHLGPVYILDDIMA 579
            G+C  G M  AF   ++M  +G   N  T+  L+R L +      G   IL D++A
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1063



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 1/330 (0%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           R CN N   +  L++ YL  G   ++ +++  M   GF P+V   + ++  +  +G    
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             S   +M +    P+V T++ LI+     G+   +S +  +M  +G +P +V Y  ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C+   F  A  L++ M  +    +  T+N  I  LC   R+     LL  M++    P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  TYN L++G     +V  A +L+ E+   G+  N VT+N ++ G    G   EA ++ 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G     +++ +++   CK  + + A     R++  G      I+YT ++ G+C 
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC-VGRITYTGMIDGLCK 415

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +G + EA + L +M  +GI P+  T++ L+
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 279/550 (50%), Gaps = 5/550 (0%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++MK  G   SE  F SVI +    G   +AL++   +   G    + +   ++    
Sbjct: 317 LLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYC 376

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           A+        +++ +  DG+ PN  TY++L++  C +  ++ A +L  +M   G  P   
Sbjct: 377 AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 436

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG-SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           +  +++    K    EEA +L   A+  G + +  YN +++ LCK  K++EA  LL  MV
Sbjct: 437 NVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMV 496

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           ++G+ PNV++Y+ +I   C  GN++ +  +   M  R   PN+ +++ L+ G    G + 
Sbjct: 497 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 556

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A DL+++M+     P    ++T+I+GLC  G M EA        E    P+  TY++++
Sbjct: 557 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 616

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DGF K GN+  A  ++  M   G SPNVV YT ++   C++N    A    ++M  +   
Sbjct: 617 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLE 676

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            +   ++  I G C    ++ A  L  ++ +    PN   YN ++ G   +N ++ A   
Sbjct: 677 LDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVW 736

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++    I  ++ TY T++ G+ + G +V A  L  +ML +G   D ITF++++   C 
Sbjct: 737 YKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCN 796

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G++ NA ++L+ +       P ++ Y +L+ G    G ++EAF    +ML+ G+ P+  
Sbjct: 797 KGQLENARKILEEM-DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDV 855

Query: 553 TWNVLVRSLF 562
           T+++L+   F
Sbjct: 856 TYDILINGKF 865



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 283/589 (48%), Gaps = 42/589 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V +L+   K         VF  ++N+Y R    E A+  F  +    + P V   N +L 
Sbjct: 174 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 233

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           AL+  N    +  +Y+ M   G+  + FT +++++A  K  RV+ A +   E   +G   
Sbjct: 234 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 293

Query: 134 DAVSYTTIVSSICK-------LGQVEEAREL------------------------AMRFG 162
           DA +Y+ I+ ++CK       L  +EE +E                         A+R  
Sbjct: 294 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 353

Query: 163 S---------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                      + V  +L+ G C +  ++ A  L  ++ + G+ PN +TYS +I   C+ 
Sbjct: 354 EEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNS 413

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           GN+E +  +  QM + G  P++ +  SLL+GYL      EAS L++  +  G + N+  Y
Sbjct: 414 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTY 472

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + ++  LC  G MDEA S+   M      PNV +Y+ +I G  + GN+  AS +++ M++
Sbjct: 473 NIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLA 532

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               PNVV Y+ ++    +     +A  L ++M   N  P   TFNT I GLC  G++  
Sbjct: 533 RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSE 592

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A   L    +   +P+  TYN ++DG ++   +  A  +  E+ + G+  N+VTY ++++
Sbjct: 593 ARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLIN 652

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C++  +  A +   +M  +G +LD   ++ +I  +CK+  + +A  L   +   G  +
Sbjct: 653 GFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG-LS 711

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           P+ I Y S++ G  +   M+ A ++ +KM+N+ I  +  T+  L+  L 
Sbjct: 712 PNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLL 760



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 200/387 (51%), Gaps = 5/387 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  ++A  +   +   G+ P V  YN ++     +    M + ++S+M    ++PNV TY
Sbjct: 483 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 542

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LA 158
           +IL+    K    + A  L  +M +   AP   ++ TI++ +CK+GQ+ EAR+     L 
Sbjct: 543 SILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE 602

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
             F      YN++++G  KE  I+ A  +  EM + G+ PNV+TY+++I+  C    ++ 
Sbjct: 603 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDL 662

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L    +M  +G   ++ ++++L+ G+        A DL+  ++  G  PN + Y+++I 
Sbjct: 663 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 722

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G     +M+ A+    +M  +  P ++ TY+ LIDG  K G L+ AS ++  M+S G  P
Sbjct: 723 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +++ +  +V  LC       A  ++E+M  +N  P+ + +NT I G    G +  A  L 
Sbjct: 783 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 842

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNR 425
           D+M     +P+  TY+ L++G  + +R
Sbjct: 843 DEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 235/512 (45%), Gaps = 27/512 (5%)

Query: 63  PTVKIY--------NHILDALL--AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           PT +I+        NH++DALL    +  S +        + G    V  Y +LL  L +
Sbjct: 87  PTSQIHQETTPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMR 146

Query: 113 NNRVDG-AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYN 169
           +    G A KLL    +    P  V +            V+     A RF   +   V+N
Sbjct: 147 SPETHGHARKLLNRYVSGDSDPSPVVF------------VDHLINCAKRFDFELDHRVFN 194

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            L+N   + ++IE A      M+ + + P V   + ++++L     +     +  +M +R
Sbjct: 195 YLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLR 254

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G   +  +   +++  L  GR  EA + +      G   +  AYS +I  +C   + +  
Sbjct: 255 GIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLG 314

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           + +  +M+E    P+  T++++I      GN++ A ++   MI+ G   N+V  T ++K 
Sbjct: 315 LELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKG 374

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C       A +L  K+  +   PN VT++  I+G C  G ++ A +L  QMK     P+
Sbjct: 375 YCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPS 434

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +   N LL G L+    +EA +L  E   CG+  NI TYN ++  +C+ G + EA  LL 
Sbjct: 435 VFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLD 493

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M+ +G   + +++N +I  +C++G ++ A  +   +    +  P++++Y+ L+ G    
Sbjct: 494 NMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML-ARDLKPNVVTYSILIDGNFKK 552

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G  ++A     +ML+  I P   T+N ++  L
Sbjct: 553 GDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 149/312 (47%), Gaps = 5/312 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM    ++ ++  F ++IN   +VG   +A        E G  P+   YN I+D  +
Sbjct: 561 LFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFI 620

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E        +Y  M   G+ PNV TY  L+   CK+NR+D A K   EM  KG   D  
Sbjct: 621 KEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVT 680

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ ++   CK   +E A++L       G+S    VYN++I+G    + +E A     +M
Sbjct: 681 AYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKM 740

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++  I  ++ TY+T+I  L   G +  +  +  +M  +G  P+I +F  L+ G    G+ 
Sbjct: 741 INDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQL 800

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +   M R+   P+V+ Y+TLI G    G++ EA ++  +M +    P+  TY  L
Sbjct: 801 ENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 860

Query: 312 IDGFAKAGNLLG 323
           I+G  K    L 
Sbjct: 861 INGKFKGDRSLS 872



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 5/246 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    + ++M   GVS +   + S+IN + +    + ALK    +RE GL+  V  Y+ 
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSA 684

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D             ++  +   G+ PN   YN ++      N ++ A     +M N  
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
              D  +YTT++  + K G++  A +L M   S      +  ++ L+NGLC + ++E A 
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 804

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L EM  + + P+V+ Y+T+I+     GN++ +  +  +M  RG  P+  ++  L+ G 
Sbjct: 805 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGK 864

Query: 246 LLGGRT 251
             G R+
Sbjct: 865 FKGDRS 870



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ +++  Q L  ++   G+S +  V+ S+I+ +R +   E AL  + ++    
Sbjct: 685 LIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDR 744

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   +  Y  ++D LL E R    + +Y  M   G+ P++ T+++L+  LC   +++ A 
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENAR 804

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K+L EM  K   P  + Y                              N LI G  +E  
Sbjct: 805 KILEEMDRKNMTPSVLIY------------------------------NTLIAGYFREGN 834

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           ++EAF L  EM+DRG+ P+ +TY  +I+
Sbjct: 835 LKEAFTLHDEMLDRGLVPDDVTYDILIN 862


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 282/616 (45%), Gaps = 79/616 (12%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +  K++ V C+      +I+        ++A+   +R+R     P V  Y  +L   L +
Sbjct: 101 EDFKLDTVLCTH-----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I + M  +G  PN   +N L+ + C       AYKLL  M   GC P  V Y
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215

Query: 139 TTIVSSICK-----------------------------------------LGQVEEAREL 157
              + SIC                                          +G+ ++A +L
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275

Query: 158 ---AMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               MR  F    S Y+ +I  LC   K+E+AF L  EM   G+ P+V TY+ +I S C 
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +E +  +  +M   GC+P + ++T+L+  YL   +  +A+D+++RM+  G  PN V 
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQM----------------EENSCPPNVTTYSALIDGFA 316
           Y  L+ GLC  G++ +A  V  ++                + ++  PNV TY AL+DG  
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA  +  A ++ + M+S+GC PN + Y  ++   C+      A  +  +M      P+  
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ + I  +   GR+D AMK+L QM +  C PN+ TY  ++DGL R+   ++A +L++ +
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ G   N+VTY  ++ G+ +AG +  +  L  +M  +G   + +T+ ++I   C  G +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI----YLQKMLNEGICPNFA 552
           + A  LL  ++    W   +  Y       C   G  ++FI     L++M + G  P   
Sbjct: 636 DKARLLLGEMK-QTYWPKYLQGYR------CAIQGFSKSFIASLGILEEMESYGTVPIAP 688

Query: 553 TWNVLVRSLFSNLGHL 568
            + +L+   FS  G L
Sbjct: 689 VYGMLI-DCFSKAGRL 703



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 164/616 (26%), Positives = 283/616 (45%), Gaps = 61/616 (9%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K ++   + ++  M  EG + +  +F S+++SY        A K+  R+   G  P   
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 213

Query: 67  IYNHILDALLAENRF------SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +YN  + ++  + +        +   IY  M       N        + LC   + D A+
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGL 175
           +L+ EM  KG  PD  +Y+ +++ +C   +VE+A    +E+ M      V  Y  LI+  
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   IE+A WL  EM   G  P V+TY+ +I +      V  +  I  +M   GC PN 
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI----------------REGFLPNVVAYSTLIHG 279
            ++ +L+ G    G   +A +++ ++I                R    PNVV Y  L+ G
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 453

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC    +D A  +   M  + C PN   Y ALIDGF KAG +  A +++ +M   G  P+
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 513

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++  + ++     A  ++ +M  ++C PN VT+   I GLC  G  + A+KLL 
Sbjct: 514 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 573

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M++  C PN+ TY  L+DGL +  ++  + +L T++ + G   N VTY  +++ +C AG
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633

Query: 460 MVVEAFQLLGKM----------------------------LIE-----GTKLDAITFNII 486
           ++ +A  LLG+M                            ++E     GT   A  + ++
Sbjct: 634 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGML 693

Query: 487 IYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           I  + K G++  A++L  + +        D   Y SL+  +C +  ++EAF    +M   
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 546 GICPNFATWNVLVRSL 561
           G  P  + +  L++ L
Sbjct: 754 GFVPELSVFVCLIKGL 769



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 240/488 (49%), Gaps = 18/488 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+MK+ GV+     +  +I+S+ + GL EQA  +F  +R  G  PTV  Y  ++ A L
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    N I+  M   G  PN  TY  L+  LCK   +  A+++  ++     + D+ 
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y             E+   LA      V  Y AL++GLCK HK++ A  LL  M+  G 
Sbjct: 430 FYFP----------CEDRHTLA----PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I   C  G ++++  +  QM   G  P++H++TSL+      GR   A  
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+++   PNVV Y+ +I GLC  G  ++A+ +   MEE  C PNV TY+ALIDG  
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KAG +  +  ++ +M   GCSPN V Y  ++  LC   +  +A  L+ +M     P    
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   I+G         ++ +L++M+ Y  +P    Y  L+D   +  R++ A EL  E+
Sbjct: 656 GYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 437 EK--CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            +    ++ +   Y +++  +C A  V EAF+L  +M   G   +   F  +I    +  
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 773

Query: 495 KVNNAIQL 502
           K + A+QL
Sbjct: 774 KWDEALQL 781



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 252/568 (44%), Gaps = 66/568 (11%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           +++FG +P+   YN ++  L +  +  +   +   M   G   + FT      ALCK  R
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 116 --------------------------------VDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                                            D A   L  M    C P+ V+Y T++S
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 144 SICK---LGQVEEARELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
              K   LG  +    + M  G     S++N+L++  C E     A+ LL  M   G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 199 NVITYSTIISSLCDVGNVET------SLGILGQMFVRGC---NPNIHSFTSLLKGYLLGG 249
             + Y+  I S+C    + +      +  I G+M    C     N+ +F   L G    G
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV---G 267

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A  L   M+R+GF+P+   YS +I  LC    +++A  +  +M+     P+V TY+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LID F KAG +  A  ++  M S GCSP VV YT ++    +     QA+ +  +M   
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM----------------KQYECLPNITTY 413
            C PN VT+   + GLC  G +  A ++  ++                 ++   PN+ TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+DGL + ++V  A EL+  +   G + N + Y+ ++ G C+AG +  A ++  +M  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G      T+  +I    K G+++ A+++L ++       P++++YT+++ G+C  G  +
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CTPNVVTYTAMIDGLCRIGESE 566

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +A   L  M  +G  PN  T+  L+  L
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGL 594



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 40/334 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++D    LL  M   G   +  V+ ++I+ + + G  + A ++F ++ + G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+V  Y  ++D +  + R  +   + S M +D   PNV TY  ++  LC+    + A 
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
           KLL  M  KGC+P+ V+YT ++  + K G+++ + +L  +    G S     Y  LIN L
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629

Query: 176 CKEHKIEEA----------FW-----------------------LLCEMVDRGIDPNVIT 202
           C    +++A          +W                       +L EM   G  P    
Sbjct: 630 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV 689

Query: 203 YSTIISSLCDVGNVETSLGILGQMF--VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           Y  +I      G +E ++ +  +M         +   + SL++   L  +  EA  L++ 
Sbjct: 690 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           M R GF+P +  +  LI GL      DEA+ + Y
Sbjct: 750 MTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 153/393 (38%), Gaps = 74/393 (18%)

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS- 300
           L+  L    +H A D  + +   G+ P+ V Y+ L+  L S G +D    V  +M E+  
Sbjct: 12  LRASLRRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGF 71

Query: 301 CPPNVTT-------------------------------YSALIDGFAKAGNLLGASQIWN 329
           C    T                                 + +I G  +A     A    +
Sbjct: 72  CMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLH 131

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM  N C PNVV Y  ++    +         +I  M  E C PN   FN+ +   C   
Sbjct: 132 RMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEK 191

Query: 390 RVDWAMKLLDQMKQYECLPNITTYN---------------ELLD---------------- 418
              +A KLL++M    C P    YN               +LLD                
Sbjct: 192 DYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 251

Query: 419 ----------GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
                      L  V +  +AF+L+ E+ + G   +  TY+ ++  +C A  V +AF L 
Sbjct: 252 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 311

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            +M + G   D  T+ I+I ++CK G +  A  L + +R  G  +P +++YT+L+     
Sbjct: 312 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG-CSPTVVTYTALIHAYLK 370

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  + +A     +M++ G  PN  T+  LV  L
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL 403


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 242/451 (53%), Gaps = 9/451 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+ FTY  L++  CK  ++  A  LL EM   G  P  V++ +++  +C+L   ++A ++
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 158 -----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                 M+      +Y  +I  LCK +K++ A      MV  G  P+ +TY+ ++ SL  
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFK 169

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
               E    I  +M  +G +P + ++ +++ GY   GR  +A  L  R+   G  P+   
Sbjct: 170 ACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSL 229

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTLI GLC +   DEA  + ++M       +V  Y++ I G  KAG L  A  +  +MI
Sbjct: 230 YSTLIDGLCKHDRHDEAREL-FEMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMI 287

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             GC+P+ V+Y  ++  LC++N   +A  L+++     C P        + GLC   RV+
Sbjct: 288 EAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVE 347

Query: 393 WAMKLLDQMKQY-ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
            A  +L++M +  +  P++ TY+ ++DGL + +R+ +A+ ++ ++ + G   ++VTY  I
Sbjct: 348 EACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAI 407

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +   C+ G + EA +L  +M   G  LD + +NI+I  YC+  KV+ AI +++ + G G 
Sbjct: 408 IDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG- 466

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
             P+++S ++++ G+C    ++EA + ++KM
Sbjct: 467 IQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 243/475 (51%), Gaps = 9/475 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G + N +T N LL+    +     AY++  +       PD  +Y T++   CK  Q+ 
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 153 EAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A  L     A      +  + +LI  LC+ +  ++A  +  +M+D  + P+   Y+ +I
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC +  ++ +     +M   GC P+  ++T L+       +  +   ++  M+ +G  
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P +V Y+T+++G C  G +D+A+S+  +++     P+ + YS LIDG  K      A ++
Sbjct: 190 PELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAREL 249

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +   ++ G   +V+ YT  +  LC+     +A ++  KM    C P+ V++N  I  LC 
Sbjct: 250 FE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK 307

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIV 446
             RV  A +L+DQ  + +C+P +     L+DGL +  RV+EA  ++  + + G +  ++V
Sbjct: 308 DNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVV 367

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY+ ++ G+C+A  + +A+ +L KM   G   D +T+  II A+CK G+++ A +L  R+
Sbjct: 368 TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM 427

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              G    D+++Y  L+ G C +  + EA   +++M   GI PN  + + +V  L
Sbjct: 428 HERG-CALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGL 481



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 248/490 (50%), Gaps = 8/490 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++  +   G   +A ++F        +P    Y  ++       +      +   MK  
Sbjct: 22  SLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAA 81

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P + T+  L++ LC+ N  D A ++  +M +    PDA  YT ++  +CK+ +++ A
Sbjct: 82  GITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLA 141

Query: 155 RELAMRF-GSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                R   SG       Y  L++ L K  K E+   +  EM+ +G  P ++TY+T+++ 
Sbjct: 142 ASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNG 201

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  G ++ +L ++ ++   G +P+   +++L+ G     R  EA +L+   +  G + +
Sbjct: 202 YCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQD 259

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V+ Y++ I GLC  G +DEA +V  +M E  C P+  +Y+ +I    K   +  A ++ +
Sbjct: 260 VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMD 319

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGC 388
           + +   C P V   T +V  LC++    +A  ++E+M    +  P+ VT++  I GLC  
Sbjct: 320 QAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKA 379

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            R+D A  +L +M++  C+P++ TY  ++D   +V R+ EA EL   + + G  L++V Y
Sbjct: 380 DRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAY 439

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N ++ G CRA  V EA  ++ +M   G + + ++ + I+   CK+ +V  A  L++++  
Sbjct: 440 NILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKMNF 499

Query: 509 GGEWNPDIIS 518
               + D +S
Sbjct: 500 ESLPDSDPVS 509



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 225/419 (53%), Gaps = 8/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +MK  G++ +   F S+I     +   ++AL++F+++ +  +KP   +Y  ++  L 
Sbjct: 74  LLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLC 133

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N+  +    +  M + G  P+  TY +L+ +L K  + +  +++  EM +KG +P+ V
Sbjct: 134 KINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 193

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T+V+  CK G++++A  L  R  G+G     S+Y+ LI+GLCK  + +EA  L  EM
Sbjct: 194 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EM 252

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G   +VI Y++ IS LC  G ++ +  +  +M   GC P+  S+  ++       R 
Sbjct: 253 A-AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 311

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA-VSVSYQMEENSCPPNVTTYSA 310
            EA +L ++ +    +P V   + L+ GLC +  ++EA V +   +E     P+V TYSA
Sbjct: 312 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSA 371

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDG  KA  L  A  +  +M   GC P+VV YT ++   C+     +A  L ++M    
Sbjct: 372 VIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 431

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           C  + V +N  I+G C   +VD A+ ++++M      PN+ + + ++DGL + +RV+EA
Sbjct: 432 CALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 196/403 (48%), Gaps = 7/403 (1%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           S+    +N  C  H+  EA+ +  + +     P+  TY T+I   C    +  ++ +LG+
Sbjct: 22  SLLEVFVNDGC--HR--EAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGE 77

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   G  P I +F SL++       T +A  ++++MI     P+   Y+ +I  LC    
Sbjct: 78  MKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINK 137

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D A S   +M ++ C P+  TY+ L+    KA       QI+  M+S G SP +V Y  
Sbjct: 138 LDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 197

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V   C+     QA SL+ ++      P+   ++T I GLC   R D A +L +      
Sbjct: 198 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAGD- 256

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            + ++  Y   + GL +  ++ EA  +  ++ + G   + V+YN I++ +C+   V EA 
Sbjct: 257 -VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAK 315

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +L+ + +            +++   CK  +V  A  +L+R+   G+  P +++Y++++ G
Sbjct: 316 ELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDG 375

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           +C +  + +A++ LQKM   G  P+  T+  ++ + F  +G L
Sbjct: 376 LCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDA-FCKVGRL 417


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 270/572 (47%), Gaps = 42/572 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+  +I  Y R G+ + +L++F  +  +G  P+V   N IL +++       +      M
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            +  + P+V T+NIL+  LC     + +  L+ +M   G AP  V+Y T++   CK G+ 
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A EL     S      V  YN LI+ LC+ ++I + + LL +M  R I PN +TY+T+
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+   + G V  +  +L +M   G +PN  +F +L+ G++  G   EA  ++  M  +G 
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364

Query: 267 LPNVVAYSTL-----------------------------------IHGLCSNGSMDEAVS 291
            P+ V+Y  L                                   I GLC NG +DEAV 
Sbjct: 365 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M ++   P++ TYSALI+GF K G    A +I  R+   G SPN + Y+ ++   C
Sbjct: 425 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  + E M  E    +  TFN  +  LC  G+V  A + +  M     LPN  
Sbjct: 485 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 544

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +++ L++G        +AF +  E+ K G      TY ++L G+C+ G + EA + L  +
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
                 +D + +N ++ A CK G +  A+ L   +       PD  +YTSL+ G+C  G 
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL-PDSYTYTSLISGLCRKGK 663

Query: 532 MQEAFIYLQKMLNEG-ICPNFATWNVLVRSLF 562
              A ++ ++    G + PN   +   V  +F
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 261/560 (46%), Gaps = 6/560 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V   L++M    +      F  +IN     G  E++  +  ++ + G  PT+  YN +L 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               + RF     +  +MK  G++ +V TYN+L+  LC++NR+   Y LL +M  +   P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 134 DAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLL 188
           + V+Y T+++     G+V  A +L    + FG   +   +NALI+G   E   +EA  + 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M  +G+ P+ ++Y  ++  LC     + + G   +M   G      ++T ++ G    
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L N M ++G  P++V YS LI+G C  G    A  +  ++      PN   Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI    + G L  A +I+  MI  G + +   +  +V  LC+     +A   +  M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   PNTV+F+  I G    G    A  + D+M +    P   TY  LL GL +   ++E
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A + +  +      ++ V YNT+L  +C++G + +A  L G+M+      D+ T+  +I 
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C++GK   AI         G   P+ + YT  + G+  +G  +    + ++M N G  
Sbjct: 657 GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHT 716

Query: 549 PNFATWNVLVRSLFSNLGHL 568
           P+  T N ++   +S +G +
Sbjct: 717 PDIVTTNAMIDG-YSRMGKI 735



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 274/620 (44%), Gaps = 75/620 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M   G+S +   F ++I+ +   G  ++ALKMFY +   GL P+   Y  +LD L 
Sbjct: 320 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 379

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F +    Y  MKR+G+     TY  ++  LCKN  +D A  LL EM   G  PD V
Sbjct: 380 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIV 439

Query: 137 SYTTIVSSICKLGQVEEARELAMR-FGSGVS----------------------------- 166
           +Y+ +++  CK+G+ + A+E+  R +  G+S                             
Sbjct: 440 TYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM 499

Query: 167 ----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      +N L+  LCK  K+ EA   +  M   GI PN +++  +I+   + G  
Sbjct: 500 ILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEG 559

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +  +M   G +P   ++ SLLKG   GG   EA      +       + V Y+TL
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTL 619

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG- 335
           +  +C +G++ +AVS+  +M + S  P+  TY++LI G  + G  + A        + G 
Sbjct: 620 LTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGN 679

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN V YTC V  + +   +       E+M      P+ VT N  I G    G+++   
Sbjct: 680 VLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTN 739

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LL +M      PN+TTYN LL G  +   V  +F L   I   GI  + +T ++++ G+
Sbjct: 740 DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI 799

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----- 510
           C + M+    ++L   +  G ++D  TFN++I   C  G++N A  L+  +   G     
Sbjct: 800 CESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 859

Query: 511 -----------------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
                                          +P+   Y  L+ G+C  G ++ AF+  ++
Sbjct: 860 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 919

Query: 542 MLNEGICPNFATWNVLVRSL 561
           M+   ICP     + +VR+L
Sbjct: 920 MIAHKICPPNVAESAMVRAL 939



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 266/554 (48%), Gaps = 7/554 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+   +  +E  + ++IN +   G    A ++   +  FGL P    +N ++D  +
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +E  F     ++  M+  G+ P+  +Y +LL  LCKN   D A    + M   G     +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +CK G ++EA  L            +  Y+ALING CK  + + A  ++C +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ PN I YST+I + C +G ++ ++ I   M + G   +  +F  L+      G+ 
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +    M  +G LPN V++  LI+G  ++G   +A SV  +M +    P   TY +L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  K G+L  A +    + +   + + V Y  ++  +C++    +A SL  +M   + 
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLLRVNRVKEAF 430
            P++ T+ + I GLC  G+   A+    + + +   LPN   Y   +DG+ +  + K   
Sbjct: 645 LPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
               +++  G   +IVT N ++ G  R G + +   LL +M  +    +  T+NI+++ Y
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K+  V+ +  L   I   G   PD ++  SL+ GIC S  ++     L+  +  G+  +
Sbjct: 765 SKRKDVSTSFLLYRSIILNGIL-PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVD 823

Query: 551 FATWNVLVRSLFSN 564
             T+N+L+    +N
Sbjct: 824 RYTFNMLISKCCAN 837



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 265/585 (45%), Gaps = 42/585 (7%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
            YL+Q+M+  G + +   + +V++ Y + G  + A+++   ++  G+   V  YN ++  
Sbjct: 213 SYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHD 272

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-------- 126
           L   NR +    +  +M++  + PN  TYN L+       +V  A +LL EM        
Sbjct: 273 LCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN 332

Query: 127 --------------GN-------------KGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
                         GN             KG  P  VSY  ++  +CK  + + AR   M
Sbjct: 333 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM 392

Query: 160 RFG-SGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R   +GV V    Y  +I+GLCK   ++EA  LL EM   GIDP+++TYS +I+  C VG
Sbjct: 393 RMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 452

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             +T+  I+ +++  G +PN   +++L+      G   EA  ++  MI EG   +   ++
Sbjct: 453 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 512

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L+  LC  G + EA      M  +   PN  ++  LI+G+  +G  L A  +++ M   
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 572

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P    Y  ++K LC+     +A   ++ +       +TV +NT +  +C  G +  A
Sbjct: 573 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 632

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILH 453
           + L  +M Q   LP+  TY  L+ GL R  +   A     E E  G  L N V Y   + 
Sbjct: 633 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 692

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+ +AG          +M   G   D +T N +I  Y + GK+     LL  + G     
Sbjct: 693 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGG 751

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           P++ +Y  LL G      +  +F+  + ++  GI P+  T + LV
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 240/485 (49%), Gaps = 27/485 (5%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           N   Y+IL++   +   +  + ++   MG  G  P   +   I+ S+ K G+        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 155 -RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              L  +    V+ +N LIN LC E   E++ +L+ +M   G  P ++TY+T++   C  
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLL----------KGYLLGGRTHEASDLWNRMIR 263
           G  + ++ +L  M  +G + ++ ++  L+          KGYLL        D+  RMI 
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL------LRDMRKRMIH 295

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
               PN V Y+TLI+G  + G +  A  +  +M      PN  T++ALIDG    GN   
Sbjct: 296 ----PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++  M + G +P+ V+Y  ++  LC+N  F  A     +M         +T+   I 
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G +D A+ LL++M +    P+I TY+ L++G  +V R K A E+V  I + G+  
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N + Y+T+++  CR G + EA ++   M++EG   D  TFN+++ + CK GKV  A + +
Sbjct: 472 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 531

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             +   G   P+ +S+  L+ G  NSG   +AF    +M   G  P F T+  L++ L  
Sbjct: 532 RCMTSDGIL-PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590

Query: 564 NLGHL 568
             GHL
Sbjct: 591 G-GHL 594



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 158/656 (24%), Positives = 278/656 (42%), Gaps = 78/656 (11%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI+ L +   +D    LL +M  +G+      + ++IN + +VG  + A ++  RI   G
Sbjct: 409  MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---- 116
            L P   IY+ ++              IY  M  +G   + FT+N+L+ +LCK  +V    
Sbjct: 469  LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 117  --------DG-----------------------AYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                    DG                       A+ +  EM   G  P   +Y +++  +
Sbjct: 529  EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 146  CKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK G + EA +      A+       +YN L+  +CK   + +A  L  EMV R I P+ 
Sbjct: 589  CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY+++IS LC  G    ++    +   RG   PN   +T  + G    G+         
Sbjct: 649  YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +M   G  P++V  + +I G    G +++   +  +M   +  PN+TTY+ L+ G++K  
Sbjct: 709  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            ++  +  ++  +I NG  P+ +    +V  +C++NM      +++         +  TFN
Sbjct: 769  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I   C  G ++WA  L+  M       +  T + ++  L R +R +E+  ++ E+ K 
Sbjct: 829  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM------------------LIEGTKLDAI 481
            GI      Y  +++G+CR G +  AF +  +M                  L +  K D  
Sbjct: 889  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 482  T-----------------FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            T                 F  +++  CK G V  A++L   +   G    D++SY  L+ 
Sbjct: 949  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLIT 1007

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN-LGHLGPVYILDDIMA 579
            G+C  G M  AF   ++M  +G   N  T+  L+R L +      G   IL D++A
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1063



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 1/330 (0%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           R CN N   +  L++ YL  G   ++ +++  M   GF P+V   + ++  +  +G    
Sbjct: 117 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 176

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             S   +M +    P+V T++ LI+     G+   +S +  +M  +G +P +V Y  ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C+   F  A  L++ M  +    +  T+N  I  LC   R+     LL  M++    P
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 296

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  TYN L++G     +V  A +L+ E+   G+  N VT+N ++ G    G   EA ++ 
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G     +++ +++   CK  + + A     R++  G      I+YT ++ G+C 
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR-ITYTGMIDGLCK 415

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +G + EA + L +M  +GI P+  T++ L+
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 276/546 (50%), Gaps = 13/546 (2%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFY---RIRE-FGLKPTVKIYNHILDALLAENRFSMI 84
           +  V +++I    R    ++ LK+ Y    +RE FG +     Y+ +L +L   +   + 
Sbjct: 122 AHAVIVALIKECSRC--EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLA 179

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
              Y  M+ DG    +  Y  ++ ALCKN   + A   + ++   G   D+   T+++  
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLG 239

Query: 145 ICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            C+   + +A ++       V+       Y+ LI+GLC+  ++EEAF L  +M ++G  P
Sbjct: 240 FCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQP 299

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +  TY+ +I +LCD G ++ +  +  +M  RGC PN+H++T L+ G    G+  EA+ + 
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            +M+++   P+V+ Y+ LI+G C +G +  A  +   ME+ +C PNV T++ L++G  + 
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G    A  +  RM+ NG SP++V+Y  ++  LC+    + A+ L+  M   +  P+ +TF
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I   C  G+ D A   L  M +     +  T   L+DG+ +V + ++A  ++  + K
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             I     + N IL  + +   V E   +LGK+   G     +T+  ++    + G +  
Sbjct: 540 MRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + ++L+ ++  G   P++  YT ++ G+C  G ++EA   L  M + G+ PN  T+ V+V
Sbjct: 600 SFRILELMKLSGCL-PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658

Query: 559 RSLFSN 564
           +   +N
Sbjct: 659 KGYVNN 664



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 252/514 (49%), Gaps = 9/514 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M+ +G       + +++N+  + G  E A     +I + G      I   +L      
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243

Query: 79  NRFSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                   ++  M ++    PN  +Y+IL+  LC+  R++ A+ L  +MG KGC P   +
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303

Query: 138 YTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           YT ++ ++C  G +++A  L            V  Y  LI+GLC++ KIEEA  +  +MV
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV 363

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
              I P+VITY+ +I+  C  G V  +  +L  M  R C PN+ +F  L++G    G+ +
Sbjct: 364 KDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPY 423

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  L  RM+  G  P++V+Y+ LI GLC  G M+ A  +   M      P+  T++A+I
Sbjct: 424 KAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII 483

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           + F K G    AS     M+  G S + V  T ++  +C+      A  ++E +      
Sbjct: 484 NAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
               + N  +  L    +V   + +L ++ +   +P++ TY  L+DGL+R   +  +F +
Sbjct: 544 TTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRI 603

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           +  ++  G   N+  Y  I++G+C+ G V EA +LL  M   G   + +T+ +++  Y  
Sbjct: 604 LELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVN 663

Query: 493 QGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWG 525
            GK++ A++ +   +  G E N  I  Y+SLL G
Sbjct: 664 NGKLDRALETVRAMVERGYELNDRI--YSSLLQG 695



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 257/548 (46%), Gaps = 37/548 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM  +G   S   +  +I +    GL ++A  +F  +   G KP V  Y  ++D L 
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +    N +   M +D + P+V TYN L+   CK+ RV  A++LL  M  + C P+  
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++  +C++G+  +A  L  R         +  YN LI+GLC+E  +  A+ LL  M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               I+P+ +T++ II++ C  G  + +   LG M  +G + +  + T+L+ G    G+T
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  +   +++   L    + + ++  L     + E +++  ++ +    P+V TY+ L
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  ++G++ G+ +I   M  +GC PNV  YT ++  LCQ     +A  L+  M     
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR------ 425
            PN VT+   +KG    G++D A++ +  M +     N   Y+ LL G +   +      
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSE 707

Query: 426 ----------------VKEAFELVTEIEKC--GIQLNIVTYNTILHGVCRAGMVVEAFQL 467
                           + E   +V ++  C  G+ + +VT       +C+ G   E+  L
Sbjct: 708 ESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTR------LCKEGRTDESNDL 761

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           +  +L  G  L+    +II+ +YC + K    ++L+  +   G + P   S+  ++ G+ 
Sbjct: 762 VQNVLERGVFLEK-AMDIIMESYCSKKKHTKCMELITLVLKSG-FVPSFKSFCLVIQGLK 819

Query: 528 NSGGMQEA 535
             G  + A
Sbjct: 820 KEGDAERA 827



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/534 (22%), Positives = 244/534 (45%), Gaps = 31/534 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    +I+    + ++M  + +  S   + ++IN Y + G    A ++   + +  
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V+ +N +++ L    +      +   M  +G+ P++ +YN+L+  LC+   ++ AY
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAY 461

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVSVY----NALINGL 175
           KLL  M      PD +++T I+++ CK G+ + A   L +    G+S+       LI+G+
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K  +A ++L  +V   I     + + I+  L     V+  L +LG++   G  P++
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G +  G    +  +   M   G LPNV  Y+ +I+GLC  G ++EA  +   
Sbjct: 582 VTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK--VLCQN 353
           M+++   PN  TY+ ++ G+   G L  A +    M+  G   N   Y+ +++  VL Q 
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701

Query: 354 NMFHQAHSLIEKMAFENCPPNTVT-FNTFIKGLCGC---------------GRVDWAMKL 397
            + +   S +  +A     P  +    + ++ L GC               GR D +  L
Sbjct: 702 GIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDL 761

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           +  + +          + +++      +  +  EL+T + K G   +  ++  ++ G+ +
Sbjct: 762 VQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC-----KQGKVNNAIQLLDRI 506
            G    A +L+ ++L     ++     ++ Y  C     + G  +  I L+D++
Sbjct: 821 EGDAERARELVMELLTSNGVVEK--SGVLTYVECLMEGDETGDCSEVIDLVDQL 872


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 279/526 (53%), Gaps = 13/526 (2%)

Query: 49  ALKMFYRI-REFG---LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           A+ +F R+ R  G   L PT+  Y  ++D     +R  +    +  + + G+  +    +
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 105 ILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
            LL+ LC+  R   A  +L+  M + GC PD  SY  ++ S+C   +  +A EL      
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207

Query: 164 GVSV-------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           G +V       YN +I+G  KE  + +A  L  EMV RGI P++ TY+ ++++LC    +
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  IL QM  +G  P+  ++ SL+ GY   G+  EA  +  +M  +G LP+VV  ++L
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  LC +G + +A  V   M       ++ +Y  +++G+A  G L+  ++++N M+S+G 
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P+   +  ++K   +  M  +A  +  +M  +   P+ VT++T I  LC  G++D A++
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
             +QM      P+I+TY+ L+ G      + +A +LV ++   G++ +I  +N I++ +C
Sbjct: 448 KFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLC 507

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G V++A  +    +  G   + + +N ++  YC  GK+ NA+++ D +   G   P++
Sbjct: 508 KLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG-IQPNV 566

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           + Y +L+ G C  G + E     +++L++GI P+   +N+++  LF
Sbjct: 567 VVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLF 612



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/564 (25%), Positives = 264/564 (46%), Gaps = 44/564 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R    +  L  F ++ + GL     + +++L  L    R +  ++ +   M   G  P+V
Sbjct: 120 RAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDV 179

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEA---- 154
           F+Y I+LK+LC + +   A +LL  M   G  C P+AV+Y T++    K G V +A    
Sbjct: 180 FSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLF 239

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG------------------ 195
            E+  R     +S YN ++N LCK   +++A  +L +MVD+G                  
Sbjct: 240 NEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSST 299

Query: 196 -----------------IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
                            I P+V+T +++++SLC  G ++ +  +   M ++G   +I S+
Sbjct: 300 GQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSY 359

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             +L GY   G   + ++L+N M+ +G  P+   ++ LI      G +D A  +  +M E
Sbjct: 360 KIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMRE 419

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+V TYS +I    + G +  A + +N+MI  G +P++  Y  +++  C +    +
Sbjct: 420 QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK 479

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  L+ +M  +   P+   FN  I  LC  GRV  A  + D        PN+  YN L+D
Sbjct: 480 AKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMD 539

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G   V +++ A  +   +   GIQ N+V Y T+++G C+ G + E   L  ++L +G K 
Sbjct: 540 GYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKP 599

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
               +NII++   + G+   A      +   G    D  +Y+ +L G+  +    EA + 
Sbjct: 600 STTLYNIILHGLFQAGRTVPAKVKFHEMTESG-IAMDRYTYSIVLGGLFKNSCSDEAILL 658

Query: 539 LQKMLNEGICPNFATWNVLVRSLF 562
            +++    +  +  T N+++  +F
Sbjct: 659 FKELHAMNVKIDITTLNIMIAGMF 682



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 162/598 (27%), Positives = 263/598 (43%), Gaps = 52/598 (8%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVF-----ISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           + +  LL +M   G  C   VF     +  + S R+ G A++ L+M        L P   
Sbjct: 161 EALDILLHRMPHLG--CVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCL-PNAV 217

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN ++D    E   +    +++ M + G+ P++ TYN ++ ALCK   +D A  +L +M
Sbjct: 218 AYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQM 277

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKI 181
            +KG  PD  +Y +++      GQ +EA  ++ +  S      V   N+L+  LCK  KI
Sbjct: 278 VDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKI 337

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A  +   M  +G   ++ +Y  +++     G +     +   M   G  P+ H F  L
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVL 397

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +K Y   G    A+ ++N M  +G  P+VV YST+I  LC  G MD+AV    QM +   
Sbjct: 398 IKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV 457

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQ----------------------------------- 326
            P+++TY  LI GF   G+LL A                                     
Sbjct: 458 APSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQN 517

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I++  IS G  PNV+ Y  ++   C       A  + + M      PN V + T + G C
Sbjct: 518 IFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYC 577

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             GR+D  + L  ++      P+ T YN +L GL +  R   A     E+ + GI ++  
Sbjct: 578 KVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRY 637

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY+ +L G+ +     EA  L  ++     K+D  T NI+I    +  +V  A  L   I
Sbjct: 638 TYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASI 697

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC--PNFATWNVLVRSLF 562
              G   P +++Y+ ++  +   G ++EA      M N G C  PN    N +VR L 
Sbjct: 698 SRSG-LVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG-CEQPNSQLLNHVVRELL 753



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/534 (23%), Positives = 255/534 (47%), Gaps = 41/534 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  + +L+QM  +GV      + S+I  Y   G  ++A+++  ++   G+ P V   N 
Sbjct: 267 MDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNS 326

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTY--------------------------- 103
           ++ +L    +      ++ +M   G + ++F+Y                           
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG 386

Query: 104 --------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
                   N+L+KA  K   +D A  +  EM  +G  PD V+Y+T+++++C++G++++A 
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446

Query: 156 E-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E     +       +S Y+ LI G C    + +A  L+ +M+++G+ P++  ++ II++L
Sbjct: 447 EKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNL 506

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C +G V  +  I       G +PN+  + +L+ GY L G+   A  +++ M+  G  PNV
Sbjct: 507 CKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNV 566

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y TL++G C  G +DE +S+  ++      P+ T Y+ ++ G  +AG  + A   ++ 
Sbjct: 567 VVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHE 626

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  +G + +   Y+ ++  L +N+   +A  L +++   N   +  T N  I G+    R
Sbjct: 627 MTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRR 686

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYN 449
           V+ A  L   + +   +P++ TY+ ++  L++   V+EA ++ + +E  G  Q N    N
Sbjct: 687 VEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLN 746

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            ++  +     +V A   L K+      LD  T  ++I  +  +G     I+ L
Sbjct: 747 HVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCREHIRFL 800


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 282/616 (45%), Gaps = 79/616 (12%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +  K++ V C+      +I+        ++A+   +R+R     P V  Y  +L   L +
Sbjct: 36  EDFKLDTVLCTH-----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 90

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I + M  +G  PN   +N L+ + C       AYKLL  M   GC P  V Y
Sbjct: 91  KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 150

Query: 139 TTIVSSICK-----------------------------------------LGQVEEAREL 157
              + SIC                                          +G+ ++A +L
Sbjct: 151 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 210

Query: 158 ---AMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               MR  F    S Y+ +I  LC   K+E+AF L  EM   G+ P+V TY+ +I S C 
Sbjct: 211 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 270

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +E +  +  +M   GC+P + ++T+L+  YL   +  +A+D+++RM+  G  PN V 
Sbjct: 271 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 330

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQM----------------EENSCPPNVTTYSALIDGFA 316
           Y  L+ GLC  G++ +A  V  ++                + ++  PNV TY AL+DG  
Sbjct: 331 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 390

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA  +  A ++ + M+S+GC PN + Y  ++   C+      A  +  +M      P+  
Sbjct: 391 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 450

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ + I  +   GR+D AMK+L QM +  C PN+ TY  ++DGL R+   ++A +L++ +
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ G   N+VTY  ++ G+ +AG +  +  L  +M  +G   + +T+ ++I   C  G +
Sbjct: 511 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 570

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI----YLQKMLNEGICPNFA 552
           + A  LL  ++    W   +  Y       C   G  ++FI     L++M + G  P   
Sbjct: 571 DKARLLLGEMK-QTYWPKYLQGYR------CAIQGFSKSFIASLGILEEMESYGTVPIAP 623

Query: 553 TWNVLVRSLFSNLGHL 568
            + +L+   FS  G L
Sbjct: 624 VYGMLI-DCFSKAGRL 638



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 164/616 (26%), Positives = 283/616 (45%), Gaps = 61/616 (9%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K ++   + ++  M  EG + +  +F S+++SY        A K+  R+   G  P   
Sbjct: 89  KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 148

Query: 67  IYNHILDALLAENRF------SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +YN  + ++  + +        +   IY  M       N        + LC   + D A+
Sbjct: 149 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 208

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGL 175
           +L+ EM  KG  PD  +Y+ +++ +C   +VE+A    +E+ M      V  Y  LI+  
Sbjct: 209 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 268

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   IE+A WL  EM   G  P V+TY+ +I +      V  +  I  +M   GC PN 
Sbjct: 269 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 328

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI----------------REGFLPNVVAYSTLIHG 279
            ++ +L+ G    G   +A +++ ++I                R    PNVV Y  L+ G
Sbjct: 329 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 388

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC    +D A  +   M  + C PN   Y ALIDGF KAG +  A +++ +M   G  P+
Sbjct: 389 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 448

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++  + ++     A  ++ +M  ++C PN VT+   I GLC  G  + A+KLL 
Sbjct: 449 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 508

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M++  C PN+ TY  L+DGL +  ++  + +L T++ + G   N VTY  +++ +C AG
Sbjct: 509 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 568

Query: 460 MVVEAFQLLGKM----------------------------LIE-----GTKLDAITFNII 486
           ++ +A  LLG+M                            ++E     GT   A  + ++
Sbjct: 569 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGML 628

Query: 487 IYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           I  + K G++  A++L  + +        D   Y SL+  +C +  ++EAF    +M   
Sbjct: 629 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 688

Query: 546 GICPNFATWNVLVRSL 561
           G  P  + +  L++ L
Sbjct: 689 GFVPELSVFVCLIKGL 704



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 240/488 (49%), Gaps = 18/488 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+MK+ GV+     +  +I+S+ + GL EQA  +F  +R  G  PTV  Y  ++ A L
Sbjct: 245 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 304

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    N I+  M   G  PN  TY  L+  LCK   +  A+++  ++     + D+ 
Sbjct: 305 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 364

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y             E+   LA      V  Y AL++GLCK HK++ A  LL  M+  G 
Sbjct: 365 FYFP----------CEDRHTLA----PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 410

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I   C  G ++++  +  QM   G  P++H++TSL+      GR   A  
Sbjct: 411 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 470

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+++   PNVV Y+ +I GLC  G  ++A+ +   MEE  C PNV TY+ALIDG  
Sbjct: 471 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KAG +  +  ++ +M   GCSPN V Y  ++  LC   +  +A  L+ +M     P    
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   I+G         ++ +L++M+ Y  +P    Y  L+D   +  R++ A EL  E+
Sbjct: 591 GYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 648

Query: 437 EK--CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            +    ++ +   Y +++  +C A  V EAF+L  +M   G   +   F  +I    +  
Sbjct: 649 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 708

Query: 495 KVNNAIQL 502
           K + A+QL
Sbjct: 709 KWDEALQL 716



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 157/319 (49%), Gaps = 10/319 (3%)

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR  +A D+  R   E F  + V  + +I GL      DEA+S  ++M  NSC PNV TY
Sbjct: 24  GRWADALDMIER---EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 80

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             L+ GF K   L    +I N M++ GC+PN   +  +V   C    +  A+ L+ +M  
Sbjct: 81  RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 140

Query: 369 ENCPPNTVTFNTFIKGLCGCGR------VDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
             CPP  V +N FI  +CG  +      +D A K+  +M    C+ N          L  
Sbjct: 141 CGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCG 200

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           V +  +AF+L+ E+ + G   +  TY+ ++  +C A  V +AF L  +M + G   D  T
Sbjct: 201 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 260

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           + I+I ++CK G +  A  L + +R  G  +P +++YT+L+     +  + +A     +M
Sbjct: 261 YTILIDSFCKAGLIEQAQWLFEEMRSVG-CSPTVVTYTALIHAYLKAKQVPQANDIFHRM 319

Query: 543 LNEGICPNFATWNVLVRSL 561
           ++ G  PN  T+  LV  L
Sbjct: 320 VDAGCRPNDVTYGALVDGL 338



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 40/334 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++D    LL  M   G   +  V+ ++I+ + + G  + A ++F ++ + G
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+V  Y  ++D +  + R  +   + S M +D   PNV TY  ++  LC+    + A 
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
           KLL  M  KGC+P+ V+YT ++  + K G+++ + +L  +    G S     Y  LIN L
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564

Query: 176 CKEHKIEEA----------FW-----------------------LLCEMVDRGIDPNVIT 202
           C    +++A          +W                       +L EM   G  P    
Sbjct: 565 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV 624

Query: 203 YSTIISSLCDVGNVETSLGILGQMF--VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           Y  +I      G +E ++ +  +M         +   + SL++   L  +  EA  L++ 
Sbjct: 625 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 684

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           M R GF+P +  +  LI GL      DEA+ + Y
Sbjct: 685 MTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 718



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+++ +   +D    +L QM  +  + +   + ++I+   R+G +E+ALK+   + E G
Sbjct: 455 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 514

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L    +  +   +++ M R G  PN  TY +L+  LC    +D A 
Sbjct: 515 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 574

Query: 121 KLLVEMGNK---------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG--VSVYN 169
            LL EM             CA    S + I S    LG +EE       +G+     VY 
Sbjct: 575 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS----LGILEEMES----YGTVPIAPVYG 626

Query: 170 ALINGLCKEHKIEEAFWLLCEM--VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
            LI+   K  ++E A  L  EM  V   +  +   Y+++I +LC    VE +  +  +M 
Sbjct: 627 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 686

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            RG  P +  F  L+KG +   +  EA  L   +  EG
Sbjct: 687 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 159/562 (28%), Positives = 273/562 (48%), Gaps = 13/562 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF---YRIREFGLKPTVKIYNH 70
           V+ LL+ MK + ++ +      V+ +Y   GL  +AL+++   Y I  +   P V   N 
Sbjct: 118 VENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNY--LPDVIACNA 175

Query: 71  ILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           +L+AL+ + +  +   +Y  M KRDG   N ++  I+++ LCK  +V+   KL+ +   K
Sbjct: 176 LLNALIQQKKVEIARKVYEEMVKRDGCWDN-YSVCIMVRGLCKERKVEEGRKLINDRWGK 234

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           GC P+ V Y T+V    K G VE A    +EL M+ F      Y  +INGLCK+   +  
Sbjct: 235 GCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAV 294

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM +RG+D NV  Y++I+ +    G        L  +   GC P+I ++ +L+ G
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISG 354

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+ HEA +L    I+ G  PN ++Y+ LIH  C  G    A  +   M E   P +
Sbjct: 355 SCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLD 414

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y AL+ G   AG +  A  + ++M+  G  P+   Y  ++  LC+      A  L+ 
Sbjct: 415 LVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLV 474

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +N   +     T + G    G++D A KL +        P +  YN ++ G  +  
Sbjct: 475 EMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFG 534

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            + +A   V  ++      +  TY+TI+ G  +   +  A +L G+M+ +  K + +T+ 
Sbjct: 535 MMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYT 594

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  +C+ G  + A +  + +R  G   P++++YT L+   C  G + +A  + + ML 
Sbjct: 595 SLINGFCRTGDSSRAEKTFEEMRSSG-LKPNVVTYTILIGCFCKEGKISKACSFFELMLL 653

Query: 545 EGICPNFATWNVLVRSLFSNLG 566
               PN  T+N L+  L +NL 
Sbjct: 654 NRCIPNDVTFNYLINGLTNNLA 675



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 243/520 (46%), Gaps = 18/520 (3%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P +  YN ++D           N ++  +K  G  P   TY I++  LCK       
Sbjct: 235 GCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAV 294

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLG-QVEEARELAMRFGSG----VSVYNALING 174
             LLVEM  +G   +   Y +IV +  K G ++E  + L     +G    ++ YN LI+G
Sbjct: 295 DGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISG 354

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C++ K+ EA  LL   + RG+ PN ++Y+ +I   C  G    +  +   M  +G   +
Sbjct: 355 SCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLD 414

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +L+ G +  G    A  + ++M+  G LP+   Y+ L++GLC  G +  A  +  
Sbjct: 415 LVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLV 474

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M   +   +    + L+DGF + G L  A +++   I+ G  P VV Y  M+K  C+  
Sbjct: 475 EMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFG 534

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M + A + +++M   +  P+  T++T I G      +  A+KL  QM + +C PN+ TY 
Sbjct: 535 MMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYT 594

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++G  R      A +   E+   G++ N+VTY  ++   C+ G + +A      ML+ 
Sbjct: 595 SLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLN 654

Query: 475 GTKLDAITFNIII------YAYCKQGKVNNAIQ-----LLDRIRG--GGEWNPDIISYTS 521
               + +TFN +I       A     K N +++     ++D  R      W   + +Y S
Sbjct: 655 RCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNS 714

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +C+   +  A     KM  +GI P+  ++  LV  L
Sbjct: 715 VLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGL 754



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 238/515 (46%), Gaps = 54/515 (10%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++++ Y + G  E+A  +F  ++  G  PT + Y  +++ L  +  F  ++ +   MK  
Sbjct: 245 TLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKER 304

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G++ NV  YN ++ A  K+       K L  +   GC PD  +Y T++S  C+ G+V EA
Sbjct: 305 GVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEA 364

Query: 155 REL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            EL   A++ G   +   Y  LI+  CK+ K   AF L   M ++G   +++ Y  ++  
Sbjct: 365 EELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHG 424

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSF------------------------------- 238
           L   G V+ +L +  +M  RG  P+ + +                               
Sbjct: 425 LVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLD 484

Query: 239 ----TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
                +L+ G++  G+  EA  L+   I +G  P VV Y+ +I G C  G M++A++   
Sbjct: 485 AFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQ 544

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M++    P+  TYS +IDG+ K  +L  A +++ +M+   C PNVV YT ++   C+  
Sbjct: 545 RMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTG 604

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A    E+M      PN VT+   I   C  G++  A    + M    C+PN  T+N
Sbjct: 605 DSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFN 664

Query: 415 ELLDGLLR------VNRVKEAFELVTEIE--------KCGIQLNIVTYNTILHGVCRAGM 460
            L++GL         N+  E+ E+   +           G +  +  YN++L  +C   M
Sbjct: 665 YLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKM 724

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           V  A QL  KM  +G   D ++F  ++Y  C +G+
Sbjct: 725 VNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGR 759



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 247/532 (46%), Gaps = 29/532 (5%)

Query: 52  MFYRIREFGL-------KPTVKIYNHILDA--------LLAENR-FSMINPIYSNMKRDG 95
           +F RIR+ GL             +N +LD         LLA  R F  +  +   MK   
Sbjct: 70  VFDRIRDPGLGLKLFEWASKRSDFNDLLDGFSCSSLLKLLARCRVFVEVENLLETMKCKD 129

Query: 96  MEPNVFTYNILLKALCKNNRVDGA---YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + P     + ++ A   +  V+ A   Y +  ++ N    PD ++   +++++ +  +VE
Sbjct: 130 LAPTREALSFVVGAYVDSGLVNRALELYHIAYDIHNY--LPDVIACNALLNALIQQKKVE 187

Query: 153 EAR----ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            AR    E+  R G     SV   ++ GLCKE K+EE   L+ +   +G  PN++ Y+T+
Sbjct: 188 IARKVYEEMVKRDGCWDNYSVC-IMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTL 246

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +      G+VE + G+  ++ ++G  P   ++  ++ G            L   M   G 
Sbjct: 247 VDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGV 306

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             NV  Y++++     +G   E       + EN C P++TTY+ LI G  + G +  A +
Sbjct: 307 DVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEE 366

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +    I  G SPN ++YT ++ V C+     +A  L   M  +  P + V +   + GL 
Sbjct: 367 LLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLV 426

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G VD A+ + D+M +   LP+   YN L++GL +  R+  A  L+ E+    + L+  
Sbjct: 427 AAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAF 486

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
              T++ G  R G + EA +L    + +G     + +N +I  YCK G +N+A+  + R+
Sbjct: 487 VSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRM 546

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +  G+ +PD  +Y++++ G      +  A     +M+ +   PN  T+  L+
Sbjct: 547 K-DGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLI 597


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/573 (27%), Positives = 273/573 (47%), Gaps = 9/573 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L   M+ EG   S G    ++ S       +  L +F  +   G +P   +Y   + 
Sbjct: 15  VSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAML 74

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           A +      +   ++  MKR  + PNVF YN+L+  LCK  R+  A KL  EM  +   P
Sbjct: 75  AAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVP 134

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           + V++ T++   CK G+V+ A  L  R         +  +N+L++GLCK  +IEEA  +L
Sbjct: 135 NRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCML 194

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGN-VETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
            E+   G  P+  TYS I   L    +    +L +  +   +G   + ++ + LL G   
Sbjct: 195 NEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G+  +A ++   ++  G +P  V Y+T+++G C  G MD A+    QME     PN   
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIA 314

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++++ID F +   +  A +   +M+  G +P+V  Y  ++    +  +F +   ++E+M 
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                PN +++ + I  LC  G++  A  +L  M     LPN   YN L+DG   V +++
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA     E+ K GI   IVTYN+++ G+C+ G + EA ++   +   G   D IT+N +I
Sbjct: 435 EALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLI 494

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             Y   G     ++L + ++  G   P I ++  L+ G C+  G++       +ML   +
Sbjct: 495 SGYSNAGNSQKCLELYETMKKLG-LKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNL 552

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            P+   +N ++   +   GH+   + L   M +
Sbjct: 553 SPDRVVYNAMIHC-YQETGHVQKAFSLQKEMVD 584



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/636 (25%), Positives = 282/636 (44%), Gaps = 76/636 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++E L E  + D V  L ++M   G    + V+   + +  ++G  + A+++F  ++   
Sbjct: 37  IVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRK 96

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V +YN ++  L  E R      ++  M    + PN  T+N L+   CK   VD A 
Sbjct: 97  VVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAI 156

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------------------- 161
            L   M  +   P  +++ +++S +CK  ++EEAR +                       
Sbjct: 157 GLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGL 216

Query: 162 ------------------GSGVSVYN----ALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                             G GV + N     L+NGLCKE K+E+A  +L  +V+ G+ P 
Sbjct: 217 LKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPG 276

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            + Y+TI++  C +G+++ ++  + QM  RG  PN  +F S++  +       +A +   
Sbjct: 277 EVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVK 336

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           +M+ +G  P+V  Y+ LI G            +  +MEEN   PNV +Y +LI+   K G
Sbjct: 337 KMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDG 396

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +L A  +   M+  G  PN   Y  ++   C      +A    ++M+        VT+N
Sbjct: 397 KILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYN 456

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + IKGLC  G++  A ++   +      P++ TYN L+ G       ++  EL   ++K 
Sbjct: 457 SLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL 516

Query: 440 GI------------------------------QLNI----VTYNTILHGVCRAGMVVEAF 465
           G+                              Q+N+    V YN ++H     G V +AF
Sbjct: 517 GLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAF 576

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            L  +M+  G + D  T+N +I  + K+GK++    L+D ++  G   P+  +Y+ L+ G
Sbjct: 577 SLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKG-LIPEADTYSLLIQG 635

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            C+      A+++ ++ML  G  PN    N L   L
Sbjct: 636 HCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGL 671



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/495 (28%), Positives = 249/495 (50%), Gaps = 14/495 (2%)

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
           S ++ +Y  M+++G  P+     +++++L ++ + D    L  EM   G  PD + Y   
Sbjct: 13  SQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRA 72

Query: 142 VSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           + +  KLG ++ A EL       +    V VYN LI GLCKE +I +A  L  EM  R +
Sbjct: 73  MLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNL 132

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PN +T++T+I   C  G V+ ++G+  +M      P+I +F SLL G     R  EA  
Sbjct: 133 VPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARC 192

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT----TYSALI 312
           + N +   GF+P+   YS +  GL  +   D+    +  +   +    V     T S L+
Sbjct: 193 MLNEIKCNGFVPDGFTYSIIFDGLLKS---DDGAGAALDLYREAIGKGVKIDNYTCSILL 249

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           +G  K G +  A ++   ++ +G  P  V Y  +V   CQ     +A   IE+M      
Sbjct: 250 NGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLR 309

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN + FN+ I   C    +D A + + +M      P++ TYN L+DG  R+      F++
Sbjct: 310 PNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQI 369

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+E+ G + N+++Y ++++ +C+ G ++EA  +L  M+  G   +A  +N++I   C 
Sbjct: 370 LEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCT 429

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            GK+  A++  D +   G     I++Y SL+ G+C  G ++EA      + + G CP+  
Sbjct: 430 VGKLREALRFFDEMSKNG-IGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVI 488

Query: 553 TWNVLVRSLFSNLGH 567
           T+N L+ S +SN G+
Sbjct: 489 TYNSLI-SGYSNAGN 502



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 214/460 (46%), Gaps = 11/460 (2%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           +K++  +CS      ++N   + G  E+A ++   + E GL P   IYN I++       
Sbjct: 238 VKIDNYTCS-----ILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD 292

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                     M+  G+ PN   +N ++   C+   +D A + + +M  KG AP   +Y  
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352

Query: 141 IVSS---ICKLGQVEEARELAMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++     +C   +  +  E     G   +V  Y +LIN LCK+ KI EA  +L +MV RG
Sbjct: 353 LIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRG 412

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PN   Y+ +I   C VG +  +L    +M   G    I ++ SL+KG    G+  EA 
Sbjct: 413 VLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAE 472

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +++  +   G  P+V+ Y++LI G  + G+  + + +   M++    P + T+  LI G 
Sbjct: 473 EMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGC 532

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
           +K G  L  + ++N M+    SP+ V Y  M+    +     +A SL ++M      P+ 
Sbjct: 533 SKEGIKLKET-LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDN 591

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T+N+ I G    G++     L+D MK    +P   TY+ L+ G   +     A+    E
Sbjct: 592 KTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYRE 651

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           + + G   N+   N +  G+ + G + EA  +  +M+  G
Sbjct: 652 MLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 234/547 (42%), Gaps = 42/547 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    L ++MK E V  S   F S+++   +    E+A  M   I+  G  P    Y+
Sbjct: 151 EVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYS 210

Query: 70  HILDALL-AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
            I D LL +++       +Y      G++ + +T +ILL  LCK  +V+ A ++L  +  
Sbjct: 211 IIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVE 270

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA------------RELAMRFGS------------- 163
            G  P  V Y TIV+  C++G ++ A            R   + F S             
Sbjct: 271 HGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDK 330

Query: 164 ---------------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                           V  YN LI+G  +       F +L EM + G  PNVI+Y ++I+
Sbjct: 331 AEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLIN 390

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            LC  G +  +  +L  M  RG  PN + +  L+ G    G+  EA   ++ M + G   
Sbjct: 391 CLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA 450

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
            +V Y++LI GLC  G + EA  + + +      P+V TY++LI G++ AGN     +++
Sbjct: 451 TIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELY 510

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M   G  P +  +  ++   C         +L  +M   N  P+ V +N  I      
Sbjct: 511 ETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQET 569

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G V  A  L  +M      P+  TYN L+ G L+  ++ E  +LV +++  G+     TY
Sbjct: 570 GHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTY 629

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           + ++ G C       A+    +ML  G   +    N +     K G++  A  +   +  
Sbjct: 630 SLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIA 689

Query: 509 GGEWNPD 515
            G  N D
Sbjct: 690 NGMDNLD 696



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 164/374 (43%), Gaps = 39/374 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+K  E   ID  +  +++M  +G++ S   +  +I+ Y R+ +  +  ++   + E G
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  Y  +++ L  + +      +  +M   G+ PN   YN+L+   C   ++  A 
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +   EM   G     V+Y +++  +CK+G+++EA E+     S      V  YN+LI+G 
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 176 ----------------------------------CKEHKIEEAFWLLCEMVDRGIDPNVI 201
                                             C +  I+    L  EM+   + P+ +
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRV 557

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            Y+ +I    + G+V+ +  +  +M   G  P+  ++ SL+ G+L  G+  E  DL + M
Sbjct: 558 VYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G +P    YS LI G C     + A     +M EN   PNV   + L  G  K G L
Sbjct: 618 KAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRL 677

Query: 322 LGASQIWNRMISNG 335
             A  I + MI+NG
Sbjct: 678 QEAQSICSEMIANG 691


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/559 (27%), Positives = 270/559 (48%), Gaps = 11/559 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I+ +    + E AL +F   +  GL+P ++  N +L  L+  NR   +  ++  +
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYK----LLVEMGNKGCAPDAVSYTTIVSSICK 147
           K  G  PN++TY I++   C +   D   +    +L ++   G  P  V+Y+T +  +CK
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCK 368

Query: 148 LGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
           +G VE A  L               +N +I G CK  ++ EA  +L EM   GI P+V +
Sbjct: 369 VGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYS 428

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           YS +I++ C  G+V   L ++ +M      P+I S+TSL+ G         A D+++ + 
Sbjct: 429 YSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIG 488

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
                 +   Y TLI G C  G MD A+ +  +M  N   P   +  +LI G+ K G   
Sbjct: 489 ASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFD 548

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A +++N M+ +G  P+ +A   ++   C+   F +A +L+E         N  ++N  I
Sbjct: 549 QALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAII 608

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
             LC  G  + A++LL +M +   LP++  Y+ L+ G  + +  K A  L T + K GI 
Sbjct: 609 YKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGIT 668

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            NI TY  ++     +  + EA+ +  +M   G  LD I++  +I  +C   ++  A  L
Sbjct: 669 FNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWAL 728

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + +   G  +P++I+YT ++ G C S  +  A     KM  + + P+  T+ VL+   +
Sbjct: 729 FEEMSREG-CSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLI-DWY 786

Query: 563 SNLGHLGPVYILDDIMANK 581
              G+    + L D+M +K
Sbjct: 787 HKHGYFDQAHKLYDVMKDK 805



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 196/405 (48%), Gaps = 5/405 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +   MK  G+ P+V++Y+IL+ A C    V     L+ EM +    P  VSYT+++  +C
Sbjct: 413 VLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLC 472

Query: 147 KLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K   ++ A ++    G+       +VY  LI+G C +  ++ A  LL EM+   + P   
Sbjct: 473 KKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAF 532

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           +  ++I     +G  + +L +   M   G  P+  +   +L G    G   EA  L    
Sbjct: 533 SCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDF 592

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              GF  N  +Y+ +I+ LC  G  + A+ +  +M + +  P+V  YS LI GFAK  N 
Sbjct: 593 QEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNF 652

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  ++ RM+  G + N+  YT ++ +   ++  H+A+ + ++M       + +++ T 
Sbjct: 653 KRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTL 712

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C    +  A  L ++M +  C PN+ TY  ++DG  + NR+  A  +  ++ +  +
Sbjct: 713 IVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSV 772

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
             ++VTY  ++    + G   +A +L   M  +G   D IT N++
Sbjct: 773 IPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           + ++MK  G+   +  + ++I  +      ++A  +F  +   G  P V  Y  I+D   
Sbjct: 693 IFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFC 752

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             NR  +   ++  M RD + P+V TY +L+    K+   D A+KL   M +KG  PD +
Sbjct: 753 KSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDI 812

Query: 137 SYTTIVSSICKLGQVEE 153
           ++  +     K G V+E
Sbjct: 813 THNVLG---LKAGTVQE 826


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 282/616 (45%), Gaps = 79/616 (12%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +  K++ V C+      +I+        ++A+   +R+R     P V  Y  +L   L +
Sbjct: 101 EDFKLDTVLCTH-----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 155

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I + M  +G  PN   +N L+ + C       AYKLL  M   GC P  V Y
Sbjct: 156 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 215

Query: 139 TTIVSSICK-----------------------------------------LGQVEEAREL 157
              + SIC                                          +G+ ++A +L
Sbjct: 216 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 275

Query: 158 ---AMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               MR  F    S Y+ +I  LC   K+E+AF L  EM   G+ P+V TY+ +I S C 
Sbjct: 276 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 335

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +E +  +  +M   GC+P + ++T+L+  YL   +  +A+D+++RM+  G  PN V 
Sbjct: 336 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 395

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQM----------------EENSCPPNVTTYSALIDGFA 316
           Y  L+ GLC  G++ +A  V  ++                + ++  PNV TY AL+DG  
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA  +  A ++ + M+S+GC PN + Y  ++   C+      A  +  +M      P+  
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ + I  +   GR+D AMK+L QM +  C PN+ TY  ++DGL R+   ++A +L++ +
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ G   N+VTY  ++ G+ +AG +  +  L  +M  +G   + +T+ ++I   C  G +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI----YLQKMLNEGICPNFA 552
           + A  LL  ++    W   +  Y       C   G  ++FI     L++M + G  P   
Sbjct: 636 DKARLLLGEMK-QTYWPKYLQGYR------CAIQGFSKSFIASLGILEEMESYGTVPIAP 688

Query: 553 TWNVLVRSLFSNLGHL 568
            + +L+   FS  G L
Sbjct: 689 VYGMLI-DCFSKAGRL 703



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/616 (26%), Positives = 283/616 (45%), Gaps = 61/616 (9%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K ++   + ++  M  EG + +  +F S+++SY        A K+  R+   G  P   
Sbjct: 154 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 213

Query: 67  IYNHILDALLAENRF------SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +YN  + ++  + +        +   IY  M       N        + LC   + D A+
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGL 175
           +L+ EM  KG  PD  +Y+ +++ +C   +VE+A    +E+ M      V  Y  LI+  
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   IE+A WL  EM   G  P V+TY+ +I +      V  +  I  +M   GC PN 
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI----------------REGFLPNVVAYSTLIHG 279
            ++ +L+ G    G   +A +++ ++I                R    PNVV Y  L+ G
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 453

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC    +D A  +   M  + C PN   Y ALIDGF KAG +  A +++ +M   G  P+
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 513

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++  + ++     A  ++ +M  ++C PN VT+   I GLC  G  + A+KLL 
Sbjct: 514 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 573

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M++  C PN+ TY  L+DGL +  ++  + +L T++ + G   N VTY  +++ +C AG
Sbjct: 574 LMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAG 633

Query: 460 MVVEAFQLLGKM----------------------------LIE-----GTKLDAITFNII 486
           ++ +A  LLG+M                            ++E     GT   A  + ++
Sbjct: 634 LLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGML 693

Query: 487 IYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           I  + K G++  A++L  + +        D   Y SL+  +C +  ++EAF    +M   
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753

Query: 546 GICPNFATWNVLVRSL 561
           G  P  + +  L++ L
Sbjct: 754 GFVPELSVFVCLIKGL 769



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/488 (29%), Positives = 240/488 (49%), Gaps = 18/488 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+MK+ GV+     +  +I+S+ + GL EQA  +F  +R  G  PTV  Y  ++ A L
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    N I+  M   G  PN  TY  L+  LCK   +  A+++  ++     + D+ 
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y             E+   LA      V  Y AL++GLCK HK++ A  LL  M+  G 
Sbjct: 430 FYFP----------CEDRHTLA----PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 475

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I   C  G ++++  +  QM   G  P++H++TSL+      GR   A  
Sbjct: 476 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 535

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+++   PNVV Y+ +I GLC  G  ++A+ +   MEE  C PNV TY+ALIDG  
Sbjct: 536 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KAG +  +  ++ +M   GCSPN V Y  ++  LC   +  +A  L+ +M     P    
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   I+G         ++ +L++M+ Y  +P    Y  L+D   +  R++ A EL  E+
Sbjct: 656 GYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEM 713

Query: 437 EK--CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            +    ++ +   Y +++  +C A  V EAF+L  +M   G   +   F  +I    +  
Sbjct: 714 MEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVK 773

Query: 495 KVNNAIQL 502
           K + A+QL
Sbjct: 774 KWDEALQL 781



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 146/568 (25%), Positives = 252/568 (44%), Gaps = 66/568 (11%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           +++FG +P+   YN ++  L +  +  +   +   M   G   + FT      ALCK  R
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 116 --------------------------------VDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                                            D A   L  M    C P+ V+Y T++S
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 144 SICK---LGQVEEARELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
              K   LG  +    + M  G     S++N+L++  C E     A+ LL  M   G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 199 NVITYSTIISSLCDVGNVET------SLGILGQMFVRGC---NPNIHSFTSLLKGYLLGG 249
             + Y+  I S+C    + +      +  I G+M    C     N+ +F   L G    G
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV---G 267

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A  L   M+R+GF+P+   YS +I  LC    +++A  +  +M+     P+V TY+
Sbjct: 268 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 327

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LID F KAG +  A  ++  M S GCSP VV YT ++    +     QA+ +  +M   
Sbjct: 328 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 387

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM----------------KQYECLPNITTY 413
            C PN VT+   + GLC  G +  A ++  ++                 ++   PN+ TY
Sbjct: 388 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 447

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             L+DGL + ++V  A EL+  +   G + N + Y+ ++ G C+AG +  A ++  +M  
Sbjct: 448 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 507

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G      T+  +I    K G+++ A+++L ++       P++++YT+++ G+C  G  +
Sbjct: 508 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CTPNVVTYTAMIDGLCRIGESE 566

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +A   L  M  +G  PN  T+  L+  L
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGL 594



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 147/334 (44%), Gaps = 40/334 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++D    LL  M   G   +  V+ ++I+ + + G  + A ++F ++ + G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+V  Y  ++D +  + R  +   + S M +D   PNV TY  ++  LC+    + A 
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
           KLL  M  KGC+P+ V+YT ++  + K G+++ + +L  +    G S     Y  LIN L
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629

Query: 176 CKEHKIEEA----------FW-----------------------LLCEMVDRGIDPNVIT 202
           C    +++A          +W                       +L EM   G  P    
Sbjct: 630 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPV 689

Query: 203 YSTIISSLCDVGNVETSLGILGQMF--VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           Y  +I      G +E ++ +  +M         +   + SL++   L  +  EA  L++ 
Sbjct: 690 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           M R GF+P +  +  LI GL      DEA+ + Y
Sbjct: 750 MTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCY 783



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 150/384 (39%), Gaps = 74/384 (19%)

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS-CPPNVTT-- 307
           +H A D  + +   G+ P+ V Y+ L+  L S G +D    V  +M E+  C    T   
Sbjct: 21  SHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGC 80

Query: 308 -----------------------------YSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
                                         + +I G  +A     A    +RM  N C P
Sbjct: 81  FAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 140

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           NVV Y  ++    +         +I  M  E C PN   FN+ +   C      +A KLL
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200

Query: 399 DQMKQYECLPNITTYN---------------ELLD------------------------- 418
           ++M    C P    YN               +LLD                         
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260

Query: 419 -GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             L  V +  +AF+L+ E+ + G   +  TY+ ++  +C A  V +AF L  +M + G  
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D  T+ I+I ++CK G +  A  L + +R  G  +P +++YT+L+     +  + +A  
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG-CSPTVVTYTALIHAYLKAKQVPQAND 379

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
              +M++ G  PN  T+  LV  L
Sbjct: 380 IFHRMVDAGCRPNDVTYGALVDGL 403



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 21/278 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+++ +   +D    +L QM  +  + +   + ++I+   R+G +E+ALK+   + E G
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L    +  +   +++ M R G  PN  TY +L+  LC    +D A 
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639

Query: 121 KLLVEMGNK---------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG--VSVYN 169
            LL EM             CA    S + I S    LG +EE       +G+     VY 
Sbjct: 640 LLLGEMKQTYWPKYLQGYRCAIQGFSKSFIAS----LGILEEMES----YGTVPIAPVYG 691

Query: 170 ALINGLCKEHKIEEAFWLLCEM--VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
            LI+   K  ++E A  L  EM  V   +  +   Y+++I +LC    VE +  +  +M 
Sbjct: 692 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            RG  P +  F  L+KG +   +  EA  L   +  EG
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 265/537 (49%), Gaps = 15/537 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           F S++    R  LA  AL++F  + R     PT   YN ++ +L      +      S M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G  P+ +T+N L+   C+ N+VD A  L  +M  +G A D VSY T++  +C+ G++
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 152 EEARELAMRFG----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +EA EL   FG      + +Y AL+ GLC   + EE   +L  M + G  P+   Y+ ++
Sbjct: 240 DEAVEL---FGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVV 296

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C     + +  +L +MF +G  P + + T+++  Y   GR  +A  +   M   G  
Sbjct: 297 DFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCK 356

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNV  Y+ L+ G C+ G + +A+++  +M      P+  TY+ LI G    G++  A ++
Sbjct: 357 PNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRL 416

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              M  +G   +   Y  ++  LC++    QA SL + +      PN VTFN+ I GLC 
Sbjct: 417 LRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 476

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G+ D A K L++M    C P+  TY+  ++ L ++   +E    + E+ +  ++ + V 
Sbjct: 477 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 536

Query: 448 YNTILHGVCRA---GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           Y  ++H + +    G+V   +   G+M+  G   D +T+   + AYC +G++N A  +L 
Sbjct: 537 YTIVIHKLLKERNYGLVARTW---GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 593

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +   G    D ++Y +L+ G  + G    A   L++M +    PN  T+ +L+R L
Sbjct: 594 EMSKNGV-TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 649



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 261/589 (44%), Gaps = 28/589 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE L E   ID    L  +M    +     +   + N+ R     E+ L M  R++E G
Sbjct: 229 LIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAER----GEEGLLMLRRMKELG 284

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P+ + Y  ++D    E +      +   M   G+ P V T   ++ A CK  R+  A 
Sbjct: 285 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 344

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           ++L  M  +GC P+  +Y  +V   C  G+V +A  L  +  + GV+     YN LI G 
Sbjct: 345 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C +  IE AF LL  M   G+  +  TY+ +I++LC  G  + +  +   +  RG  PN 
Sbjct: 405 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 464

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F SL+ G    G+   A     +M+  G  P+   YS+ I  LC      E +S   +
Sbjct: 465 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 524

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+ +I    K  N    ++ W  M+S+GC+P+VV YT  ++  C    
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            ++A +++ +M+      +T+ +NT + G    G+ D A+ +L QM     +PN  TY  
Sbjct: 585 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 644

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIV-----------------TYNTILHGVCRA 458
           LL  L+R+  V++   L        I+L  V                 TY++IL G    
Sbjct: 645 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 704

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G   EA  L+  M  +   L+   +  ++  +CK  +  +A  L+  +   G + P ++S
Sbjct: 705 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHG-FIPQLMS 763

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
           Y  LL G+   G   +A         +   P+   W V++  L    GH
Sbjct: 764 YQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK-GH 811



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/527 (23%), Positives = 228/527 (43%), Gaps = 92/527 (17%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + +LQ+M  +G++       +VIN+Y + G    AL++   ++  G KP V  YN ++ 
Sbjct: 308 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 367

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +      + + M+  G+ P+  TYN+L++  C +  ++ A++LL  M   G   
Sbjct: 368 GFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 427

Query: 134 DAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D  +Y  +++++CK G+ ++A      L  R        +N+LINGLCK  K + A+  L
Sbjct: 428 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 487

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR------------------- 229
            +MV  G  P+  TYS+ I  LC +   +  L  +G+M  +                   
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 547

Query: 230 ----------------GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
                           GCNP++ ++T+ ++ Y + GR +EA ++   M + G   + +AY
Sbjct: 548 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 607

Query: 274 STLIHGLCSNGSMDEAVSVSYQM------------------------------------- 296
           +TL+ G  S G  D AVS+  QM                                     
Sbjct: 608 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 667

Query: 297 ---------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
                          ++N   PN  TYS++++GF++ G    A+ + + M  +  S N  
Sbjct: 668 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNED 727

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT +V   C++  +  A  L+  M      P  +++   + GL   G+ D A ++    
Sbjct: 728 IYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNS 787

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           +  +  P+   +  ++DGL++      + E++  +E+   + +  TY
Sbjct: 788 RWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 834



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 201/462 (43%), Gaps = 59/462 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  GV+     +  +I      G  E A ++   +   GL      YN +++AL 
Sbjct: 381 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 440

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R      ++ +++  G++PN  T+N L+  LCK+ + D A+K L +M + GC PD  
Sbjct: 441 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 500

Query: 137 SYTTIVSSICKLGQVEE------------------------------------ARELAMR 160
           +Y++ +  +CK+   +E                                    AR     
Sbjct: 501 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 560

Query: 161 FGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             SG    V  Y   +   C E ++ EA  +L EM   G+  + + Y+T++     +G  
Sbjct: 561 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 620

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR---------------THEASD---LW 258
           + ++ IL QM      PN  ++  LL+ +L+  R                 E +D   L+
Sbjct: 621 DHAVSILKQMTSVASVPNQFTYFILLR-HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 679

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           + M +  FLPN   YS+++ G   +G  +EA S+   M+E+S   N   Y+AL+  F K+
Sbjct: 680 DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKS 739

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
              L A  +   MI +G  P +++Y  ++  L       +A  +     +++  P+ + +
Sbjct: 740 KRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVW 799

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
              I GL   G  D + +++  +++  C P+  TY  L + L
Sbjct: 800 KVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 62/148 (41%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+  V  L   MK      + G + S++  +   G  E+A  +   ++E  +     IY 
Sbjct: 671 ELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYT 730

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++       R+     +  +M + G  P + +Y  LL  L    + D A ++ +    K
Sbjct: 731 ALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWK 790

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL 157
             +PD + +  I+  + K G  + +RE+
Sbjct: 791 DYSPDEIVWKVIIDGLIKKGHSDISREM 818


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 294/628 (46%), Gaps = 77/628 (12%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             +D    L   M+  G+  +   +I  I+ Y + G + +A+K F +++  G+ P +   N
Sbjct: 417  RLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACN 476

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
              L +L  + R       ++ +K+ G+ P+  TYNIL++   K  RVD A KLL EM   
Sbjct: 477  ASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEEN 536

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
            GC P+ V   +++ ++ K  +V+EA     R   M+    V  YN L+ GL KE +++EA
Sbjct: 537  GCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT----- 239
              L   M+     PN I+++T++  LC  G V+ +L +L +M    C P++ ++      
Sbjct: 597  TALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYG 656

Query: 240  -----------------------------SLLKGYLLGGRTHEA---------------- 254
                                         +LL G +  GR  +A                
Sbjct: 657  LIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHAD 716

Query: 255  ----SDLWNRMIREGFLPNVVAYS----------------TLIHGLCSNGSMDEAVSVSY 294
                 DL   ++ E  +   + ++                 L+  LC +G   +A +V  
Sbjct: 717  GSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFL 776

Query: 295  QMEENSC-PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            ++ ++ C  P++  Y++LIDG  KA     A  ++ +M + GC+P+V  Y   +  L ++
Sbjct: 777  KLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKS 836

Query: 354  NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                +   L E+M F  C PNT+T N  I GL     +D A+ L   +   +  P   TY
Sbjct: 837  GKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTY 896

Query: 414  NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
              L+DGLL++ R++EA +   E+   G   N   YN +++G  + G V  A +L  +M+ 
Sbjct: 897  GPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVK 956

Query: 474  EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            EG + D  +++I++   C  GKV++A+   + ++  G  +PD++ Y  ++ G+  S  ++
Sbjct: 957  EGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSG-LDPDLVCYNLMINGLGRSQRVE 1015

Query: 534  EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            EA     +M N GI P+  T+N L+ +L
Sbjct: 1016 EALSLFDEMRNRGITPDLYTYNALILNL 1043



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 147/549 (26%), Positives = 267/549 (48%), Gaps = 36/549 (6%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L++M+  G   +   +I +I+   + G   +ALK++ R+   G+KP++K Y+ ++ AL  
Sbjct: 180 LEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGK 239

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G+ PN++T+ I ++ L +  ++D AY +L  M + GC PD V+
Sbjct: 240 RRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVT 299

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
                                         Y  LI+ LC   K+  A  L  +M      
Sbjct: 300 ------------------------------YTVLIDALCNAGKLNNAKELFLKMKASSHK 329

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+ +TY T++    D G+++       +M   G  P++ +FT L+      G+  EA   
Sbjct: 330 PDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGT 389

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + M ++G  PN+  Y+TLI GL     +DEA+ +   ME         TY   ID + K
Sbjct: 390 LDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGK 449

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           +G    A + + +M +NG  PN+VA    +  L +     +A      +      P+ +T
Sbjct: 450 SGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAIT 509

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  ++     GRVD A+KLL +M++  C P +   N L+D L + +RV EA+++   ++
Sbjct: 510 YNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMK 569

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +  +   +VTYNT+L G+ + G V EA  L   M+ +    + I+FN ++   CK G+V+
Sbjct: 570 EMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVD 629

Query: 498 NAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
            A+++L R+    E N  PD+++Y ++++G+     +  AF    +M  + I P++ T  
Sbjct: 630 LALKMLFRMT---EMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLC 685

Query: 556 VLVRSLFSN 564
            L+  +  +
Sbjct: 686 TLLPGVIKD 694



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/598 (25%), Positives = 281/598 (46%), Gaps = 46/598 (7%)

Query: 5    LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
            L E+  ++  +     +K  G++     +  ++  Y + G  + A+K+   + E G  P 
Sbjct: 482  LAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPE 541

Query: 65   VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
            V I N ++D L   +R      ++  MK   + P V TYN LL  L K  RV  A  L  
Sbjct: 542  VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFK 601

Query: 125  EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
             M    C P+ +S+ T++  +CK G+V+ A ++  R         V  YN +I GL KE+
Sbjct: 602  GMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKEN 661

Query: 180  KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR--GCNPNIHS 237
            ++  AFWL  +M  + I P+ +T  T++  +   G +E +  +  + FV   G + +   
Sbjct: 662  RVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRV-AKEFVHHVGDHADGSF 719

Query: 238  FTSLLKGYLLGG--------------------------------RTHEASDLWNRMIR-- 263
            +  L+ G L+                                  +  +A D +N  ++  
Sbjct: 720  WEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLT 779

Query: 264  EGF--LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            + F   P++ AY++LI GL      + A  + Y+M+   C P+V TY+  +D   K+G +
Sbjct: 780  KSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKI 839

Query: 322  LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
                 ++  M+  GC PN + +  ++  L ++N   +A  L   +   +  P   T+   
Sbjct: 840  KELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPL 899

Query: 382  IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
            I GL   GR++ A +  ++M  Y C+PN   YN L++G  +   V+ A EL   + K GI
Sbjct: 900  IDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGI 959

Query: 442  QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            + ++ +Y+ ++  +C  G V +A     ++ + G   D + +N++I    +  +V  A+ 
Sbjct: 960  RPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALS 1019

Query: 502  LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            L D +R  G   PD+ +Y +L+  +  +G ++EA    +++  +G+ PN  T+N L+R
Sbjct: 1020 LFDEMRNRG-ITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIR 1076



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 251/581 (43%), Gaps = 76/581 (13%)

Query: 6    GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
            G+   +D    LL +M+  G      +  S+I++  +    ++A KMF R++E  L PTV
Sbjct: 518  GKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTV 577

Query: 66   KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
              YN +L  L  E R      ++  M  D   PN  ++N LL  LCKN  VD A K+L  
Sbjct: 578  VTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFR 637

Query: 126  MGNKGCAPDAVSYTT----------------------------------IVSSICKLGQV 151
            M    C PD ++Y T                                  ++  + K G++
Sbjct: 638  MTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRI 697

Query: 152  EEARELAMRFGSGV-----------------------------------------SVYNA 170
            E+A  +A  F   V                                         SV   
Sbjct: 698  EDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIP 757

Query: 171  LINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            L+  LCK  K  +A+ +  ++     I P++  Y+++I  L      E + G+  +M   
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 230  GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
            GC P++ ++   L      G+  E  DL+  M+  G  PN + ++ +I GL  + S+D+A
Sbjct: 818  GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877

Query: 290  VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
            + + Y +      P   TY  LIDG  K G L  A Q +  M+  GC PN   Y  ++  
Sbjct: 878  IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937

Query: 350  LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
              +      A  L  +M  E   P+  +++  +  LC  G+VD A+   +++K     P+
Sbjct: 938  FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997

Query: 410  ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
            +  YN +++GL R  RV+EA  L  E+   GI  ++ TYN ++  +  AGMV EA ++  
Sbjct: 998  LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYE 1057

Query: 470  KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            ++ ++G + +  T+N +I  +   G  + A  +  ++  GG
Sbjct: 1058 ELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGG 1098



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 263/581 (45%), Gaps = 71/581 (12%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDALLAE 78
           + K E    SE V+       + +    QA   F  + E   +  T +  N++L+ L A 
Sbjct: 80  KRKPESTMSSEEVY----RVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAH 135

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R   +  +++ M++  ++ ++ TY  + K L     +  A   L +M   G   +  SY
Sbjct: 136 RRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSY 195

Query: 139 TTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
             ++  + K                         +G C+E     A  +   MV  GI P
Sbjct: 196 IGLIHLLLK-------------------------SGFCRE-----ALKVYRRMVSEGIKP 225

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           ++ TYS ++ +L    ++ET +G+L +M   G  PNI++FT  ++     G+  EA  + 
Sbjct: 226 SLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGIL 285

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            RM   G  P+VV Y+ LI  LC+ G ++ A  +  +M+ +S  P+  TY  L+D F+  
Sbjct: 286 KRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDH 345

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+L    + W+ M ++G  P+VV +T ++  LC+     +A   ++ M  +   PN  T+
Sbjct: 346 GDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTY 405

Query: 379 NTFIKGLCGCGRVDWAMKLLDQM-----------------------------KQYE---- 405
           NT I GL    R+D A++L + M                             K +E    
Sbjct: 406 NTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKT 465

Query: 406 --CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              +PNI   N  L  L    R++EA E    ++KCG+  + +TYN ++    +AG V +
Sbjct: 466 NGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDD 525

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A +LL +M   G   + +  N +I    K  +V+ A ++  R++   +  P +++Y +LL
Sbjct: 526 AIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEM-KLAPTVVTYNTLL 584

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            G+   G +QEA    + M+ +   PN  ++N L+  L  N
Sbjct: 585 AGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKN 625



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 243/526 (46%), Gaps = 45/526 (8%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG++  +     L + M  +    +   F ++++   + G  + ALKM +R+ E  
Sbjct: 583  LLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMN 642

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P V  YN ++  L+ ENR +    ++  MK+  + P+  T   LL  + K+ R++ A+
Sbjct: 643  CFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKK-VIYPDYVTLCTLLPGVIKDGRIEDAF 701

Query: 121  KLLVE-----------------MG--------------------NKGCAPDAVSYTTIVS 143
            ++  E                 MG                    N  C  D+V    +V 
Sbjct: 702  RVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSV-LIPLVK 760

Query: 144  SICKLGQVEEARELAMRFGSG------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
             +CK G+  +A  + ++          +  YN+LI+GL K    E A+ L  +M + G  
Sbjct: 761  FLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCT 820

Query: 198  PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            P+V TY+  + +L   G ++    +  +M  RGC PN  +   ++ G +      +A DL
Sbjct: 821  PDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDL 880

Query: 258  WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            +  ++   F P    Y  LI GL   G ++EA     +M +  C PN   Y+ L++GF K
Sbjct: 881  YYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGK 940

Query: 318  AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
             G++  A +++ RM+  G  P++ +Y+ MV  LC       A    E++      P+ V 
Sbjct: 941  QGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVC 1000

Query: 378  FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            +N  I GL    RV+ A+ L D+M+     P++ TYN L+  L     V+EA ++  E++
Sbjct: 1001 YNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQ 1060

Query: 438  KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
              G++ N+ TYN ++ G   +G    A+ +  KM++ G + +  TF
Sbjct: 1061 LKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 184/389 (47%), Gaps = 31/389 (7%)

Query: 29   SEGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPI 87
             + V I ++    + G A  A  +F ++ + F + P+++ YN ++D LL      M   +
Sbjct: 751  DDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGL 810

Query: 88   YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
            +  MK  G  P+VFTYN+ L AL K+ ++   + L  EM  +GC P+ +++         
Sbjct: 811  FYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITH--------- 861

Query: 148  LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
                                 N +I GL K + +++A  L  +++     P   TY  +I
Sbjct: 862  ---------------------NIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLI 900

Query: 208  SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              L  +G +E +     +M   GC PN   +  L+ G+   G    A +L+ RM++EG  
Sbjct: 901  DGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIR 960

Query: 268  PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            P++ +YS ++  LC  G +D+A+    +++ +   P++  Y+ +I+G  ++  +  A  +
Sbjct: 961  PDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSL 1020

Query: 328  WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            ++ M + G +P++  Y  ++  L    M  +A  + E++  +   PN  T+N  I+G   
Sbjct: 1021 FDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSM 1080

Query: 388  CGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             G  D A  +  +M    C PN  T+ +L
Sbjct: 1081 SGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++D   +  +++K+ G+      +  +IN   R    E+AL +F  +R  G+ P +  YN
Sbjct: 978  KVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYN 1037

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++  L           +Y  ++  G+EPNVFTYN L++    +   D AY +  +M   
Sbjct: 1038 ALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG 1097

Query: 130  GCAPDAVSYTTI 141
            GC P+  ++  +
Sbjct: 1098 GCRPNTGTFAQL 1109


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 167/627 (26%), Positives = 287/627 (45%), Gaps = 79/627 (12%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYN 69
           +  V  ++  +K +   C E V ++VI +Y +  ++ +AL  F  +++ FG KP V+ YN
Sbjct: 61  VSHVSRIVDIVKAQKCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYN 120

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+A +  N +          +   + PN+ TYNIL+K  CK  +++ A  LL  M ++
Sbjct: 121 TLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQ 180

Query: 130 GCAPDAVSYTTIVSSICKLGQV-----------------------------------EEA 154
              PD  SY T+++ + K+G +                                   ++ 
Sbjct: 181 NLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKG 240

Query: 155 RELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           +E+  R     SV      YN +INGLCK  + +E+  +   M     + ++ TYS++I 
Sbjct: 241 KEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIH 300

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            LC+ GN++ ++ +  ++       +  +  ++L G+   G+  E+ +LW  M +E    
Sbjct: 301 GLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQ 359

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
            VV+Y+ LI GL  NG ++EA+S+   + +  C P  TTY  LI G  K G L  A +I+
Sbjct: 360 TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIF 419

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI------------------------- 363
                     +  AY+ MV  LC+     +A S++                         
Sbjct: 420 KEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRA 479

Query: 364 ----------EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                      +M  + C P  V++NT IKGLC   R   A   + +M + E  P++ T 
Sbjct: 480 SKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITC 539

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + L+DGL +  +++ A  L  +    G + +I  YN ++HG+C    + +A QL   M  
Sbjct: 540 SLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKR 599

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
                + +T N ++    K      A ++ D I   G  +PDIISY   + G+C+   + 
Sbjct: 600 STCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDG-LHPDIISYNITIKGLCSCSRIS 658

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRS 560
           +A  +L   LN GI P   TWN+LVR+
Sbjct: 659 DAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 264/509 (51%), Gaps = 16/509 (3%)

Query: 64  TVKIYNHILDALLAENRF----SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           +  +++HIL  L A++R     S I  I    K    E    T   ++KA  KN   + A
Sbjct: 43  SAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALT---VIKAYAKNKMSNKA 99

Query: 120 YKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALIN 173
                 M +  GC P   SY T++++  +L + + A   +  F S      +  YN LI 
Sbjct: 100 LDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIK 159

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             CK+ +IE+A  LL  M  + + P+V +Y T+I+ +  VG++  +L +  +M VRG   
Sbjct: 160 ISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVA 219

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           ++  +  L+ G+   G   +  ++W R++++    PNVV Y+ +I+GLC  G  DE++ +
Sbjct: 220 DVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEI 279

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +N    ++ TYS+LI G  +AGN+ GA +++  ++ +    + V +  M+   C+
Sbjct: 280 WERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCR 339

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                ++  L   M  ENC    V++N  IKGL   G+V+ A+ + + + +  C P  TT
Sbjct: 340 AGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTT 398

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  L+ GL +  R+ +A ++  E E    +L+   Y++++ G+C+ G + EA  ++ +M 
Sbjct: 399 YGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMD 458

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G KLD    N +I  + +  K+ +AI     +   G  +P I+SY +L+ G+C +   
Sbjct: 459 KRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG-CSPTIVSYNTLIKGLCKAERF 517

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            EA+ ++++ML +   P+  T ++L+  L
Sbjct: 518 SEAYSFVKEMLEKEWKPDMITCSLLMDGL 546



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 150/294 (51%), Gaps = 8/294 (2%)

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           T+I     N   ++A+     M++   C P V +Y+ L++ F +      A        S
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
              SPN+  Y  ++K+ C+     +A SL++ M  +N  P+  ++ T I G+   G +  
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLR---VNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           A+K+ D+M     + ++T YN L+DG  +    ++ KE +E +  ++ C +  N+VTYN 
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERL--VKDCSVYPNVVTYNI 262

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++G+C+ G   E+ ++  +M     + D  T++ +I+  C+ G ++ A+++   I    
Sbjct: 263 MINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESS 322

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
               D +++ ++L G C +G ++E+F     M  E  C    ++N+L++ LF N
Sbjct: 323 -LVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKEN-CQTVVSYNILIKGLFEN 374



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 157/327 (48%), Gaps = 4/327 (1%)

Query: 240 SLLKGYLLGGRTHEASDLWNRMIR-EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           +++K Y     +++A D +  M    G  P V +Y+TL++        D A S S   E 
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFES 144

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               PN+ TY+ LI    K   +  A  + + M S    P+V +Y  ++  + +      
Sbjct: 145 MDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLG 204

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELL 417
           A  + ++M+      +   +N  I G    G  D   ++ +++ K     PN+ TYN ++
Sbjct: 205 ALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMI 264

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +GL +  R  E+ E+   + K   + ++ TY++++HG+C AG +  A ++  +++     
Sbjct: 265 NGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLV 324

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           +DA+T N ++  +C+ GK+  + +L   +  G E    ++SY  L+ G+  +G ++EA  
Sbjct: 325 VDAVTHNAMLNGFCRAGKIKESFELW--MVMGKENCQTVVSYNILIKGLFENGKVEEAIS 382

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
             + +  +G  P   T+ VL+  L  N
Sbjct: 383 IWELLCKKGCRPESTTYGVLIHGLCKN 409



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 5/249 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L ++  +D    ++ QM   G      V   +IN + R    E A+  F  +   G
Sbjct: 437 MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKG 496

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT+  YN ++  L    RFS        M     +P++ T ++L+  LC+  +++ A 
Sbjct: 497 CSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMAL 556

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
            L  +  +KG  PD   Y  ++  +C + ++E+A +L         V      N L+ GL
Sbjct: 557 NLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGL 616

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K    E+A  +   ++  G+ P++I+Y+  I  LC    +  ++  L     RG  P  
Sbjct: 617 YKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTA 676

Query: 236 HSFTSLLKG 244
            ++  L++ 
Sbjct: 677 VTWNILVRA 685


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 162/596 (27%), Positives = 297/596 (49%), Gaps = 68/596 (11%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIR-EF-GLKPTVKIYNHILDALLAENRFSMINPIYSN 90
            IS++    ++G  + A+  F  +R +F  L P++ +YN +L + L  +R   ++ +YS+
Sbjct: 81  LISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSD 140

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M    + P  +T+N+L+ +LC++   D A +L  +M  KGC P+  +   +V  +C+ G 
Sbjct: 141 MLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGL 200

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           V++A EL     + R  + V VYN L++  C+E    EA  L+  M + G+ P+V+T+++
Sbjct: 201 VKQALELVNNNNSCRIANRV-VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNS 259

Query: 206 IISSLCDVGNVETSLGILGQMFVRG----CNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            IS+LC  G V  +  I   M +        PN+ +F  +LKG+   G   +A  L   M
Sbjct: 260 RISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETM 319

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            + G   ++  Y+  + GL  NG + EA  V  +M      PN  TY+ ++DG  +   L
Sbjct: 320 KKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHML 379

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  + + M+ NG  P+ VAY+ ++   C      +A S++ +M    C PNT T NT 
Sbjct: 380 SDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTL 439

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +  L   GR   A ++L +M +    P+  T N +++GL R   + +A E+V+E+   G 
Sbjct: 440 LHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGP 499

Query: 442 QL----------------------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
                                   + +TY T+++G+C+ G + EA +   +ML +  + D
Sbjct: 500 TSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPD 559

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------EWN-------------------- 513
           ++T++  I+++CKQGK+++A ++L  +   G       +N                    
Sbjct: 560 SVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKD 619

Query: 514 --------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                   PDI +Y +++  +C  G  ++A   L +ML++GI PN +++ +L+++ 
Sbjct: 620 EMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAF 675



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 255/535 (47%), Gaps = 32/535 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E    D    L ++M  +G   +E     ++    R GL +QAL++        
Sbjct: 156 LIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCR 215

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V +YN ++     E   +    +   M   G+ P+V T+N  + ALC+  +V  A 
Sbjct: 216 IANRV-VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEAS 274

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGS--GVSVYNAL 171
           ++  +M          P+ V++  ++   CK G + +AR   E   + G+   +  YN  
Sbjct: 275 RIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIW 334

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GL +  ++ EA  +L EMV +GI+PN  TY+ ++  LC    +  + G++  M   G 
Sbjct: 335 LMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGV 394

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+  ++++LL GY   G+  EA  + + MIR G  PN    +TL+H L   G   EA  
Sbjct: 395 YPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEE 454

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG---------------- 335
           +  +M E    P+  T + +++G  + G L  AS+I + M +NG                
Sbjct: 455 MLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINS 514

Query: 336 ------CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
                 C P+ + YT ++  LC+     +A     +M  +N  P++VT++TFI   C  G
Sbjct: 515 IHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQG 574

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++  A ++L  M++  C   + TYN L+ GL   N++ E + L  E+++ GI  +I TYN
Sbjct: 575 KISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYN 634

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            I+  +C  G   +A  LL +ML +G   +  +F I+I A+ K      A +L +
Sbjct: 635 NIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE 689



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 135/575 (23%), Positives = 241/575 (41%), Gaps = 100/575 (17%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ ++++ + R  +  +A ++  R+ E G+ P V  +N  + AL    +    + I+ +M
Sbjct: 221 VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM 280

Query: 92  KRDGM----EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           + D       PNV T+N++LK  CK+  +  A  L+  M   G       Y   +  + +
Sbjct: 281 QMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLR 340

Query: 148 LGQVEEAR-----ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
            G++ EAR      +A         YN +++GLC+ H + +A  L+  M+  G+ P+ + 
Sbjct: 341 NGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVA 400

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           YST++   C  G V  +  +L +M   GC PN ++  +LL      GRT EA ++  +M 
Sbjct: 401 YSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMN 460

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN----------------------S 300
            + + P+ V  + +++GLC NG +D+A  +  +M  N                      +
Sbjct: 461 EKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSN 520

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQ--------------------IWN----------- 329
           C P+  TY+ LI+G  K G L  A +                    IW+           
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 330 ----RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
                M  NGCS  +  Y  ++  L  NN   + + L ++M  +   P+  T+N  I  L
Sbjct: 581 RVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCL 640

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV-TEIEKCG---- 440
           C  G+   A+ LL +M      PN++++  L+    + +  K A EL    +  CG    
Sbjct: 641 CEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEA 700

Query: 441 -----------------------------IQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
                                        + L    Y  ++  +C+   + +A  LL K+
Sbjct: 701 LYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKL 760

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           + +G   D  +F  +I    K+G    A +L  R+
Sbjct: 761 IDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/428 (22%), Positives = 174/428 (40%), Gaps = 96/428 (22%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L     +   + L+  M   GV      + ++++ Y   G   +A  + + +   G
Sbjct: 369 MMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNG 428

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P     N +L +L  E R      +   M     +P+  T NI++  LC+N  +D A 
Sbjct: 429 CQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKAS 488

Query: 121 KLLVEMGNKG----------------------CAPDAVSYTTIVSSICKLGQVEEARE-- 156
           +++ EM   G                      C PD ++YTT+++ +CK+G++EEA++  
Sbjct: 489 EIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKF 548

Query: 157 ---LAMRFGSGVSVYNALINGLCKEHKIEEAFWLL-------C----------------- 189
              LA         Y+  I   CK+ KI  AF +L       C                 
Sbjct: 549 IEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSN 608

Query: 190 -----------EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
                      EM ++GI P++ TY+ II+ LC+ G  + ++ +L +M  +G +PN+ SF
Sbjct: 609 NQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSF 668

Query: 239 TSLLKGY----------------------------------LLGGRTHEASDLWNRMIRE 264
             L+K +                                  L GG+  EA +L+   +  
Sbjct: 669 KILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDR 728

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
                   Y  LI  LC +  + +A S+ Y++ +     +  ++  +IDG +K GN   A
Sbjct: 729 YLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQA 788

Query: 325 SQIWNRMI 332
            ++  RM+
Sbjct: 789 DELAKRMM 796


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 273/528 (51%), Gaps = 12/528 (2%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           V + +   ++ Y  + +G  P    ++     L+     S    +   +   G+   V +
Sbjct: 170 VKMTQFTHRLIYTYKYWGPNPIA--FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDS 227

Query: 103 YNILLKALCKNNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            N  L  +  N+  ++ A K+  E G    + +  SY  I+ S+C+LG+V+EA  L M+ 
Sbjct: 228 CNAFLSRIANNSEGIEMAIKVFCEYG---ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM 284

Query: 162 G-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y+ +I+G C   ++++A  L+ +M  +G+ PN  TY++II  LC +G  
Sbjct: 285 DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKS 344

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +L +M  +   P+   +T+L+ G+   G    A+  ++ M+ +   P+ + Y+TL
Sbjct: 345 FEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G    G + E  ++ ++M      P+  TY+ LID + KAG ++ A  + N M+  G 
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +PN+V Y  ++  LC++     A+ L+++M  +    N   +N+ + G+C  G ++ A+K
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+ +M+     P+  TY  ++D   R+  + +A +L+ E+   G+Q  +VT+N +++G C
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
             GM+ +  +LLG ML +G   DAIT+N ++  +C +  +N   ++  R+R  G   PD 
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV-APDS 643

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +Y  L+ G C +  ++EA+   ++M+ +G  P   ++N L++  +  
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 261/522 (50%), Gaps = 10/522 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR-FSMINPIYSNMKRDGMEPNVF 101
           +G   +A K+  ++  +GL  TV   N  L  +   +    M   ++      G+  N  
Sbjct: 203 IGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTT 259

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--- 158
           +YNI++ +LC+  +V  A++LL++M  +   PD VSY+T++   C LG++++A +L    
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 159 --MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      YN++I  LCK  K  EA  +L EM+ + I P+ + Y+T+I     +G+V
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            T+     +M  +  +P+  ++T+L++G+  GG+  E  +L++ MI  G  P+ V Y+TL
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I   C  G M  A S+  +M +    PN+ TY ALIDG  K G L  A+++ + M   G 
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             NV  Y  MV  +C+     QA  L+++M      P+ +T+ T I   C  G +D A K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +M      P + T+N L++G   +  +++   L+  + + GI  + +TYNT++   C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               +    ++  +M  +G   D+ T+NI+I  +CK   +  A  L   +   G + P +
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG-YVPTV 678

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            SY +L+        + EA    ++M   G+  +   +N  V
Sbjct: 679 TSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 242/498 (48%), Gaps = 5/498 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +G++  ++     G+S +   +  +I S  R+G  ++A ++  ++      P V  Y+ +
Sbjct: 240 EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTV 299

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D             +  +M+  G++PN +TYN ++  LCK  +   A K+L EM ++  
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            PD V YTT++    KLG V  A +     L+ +       Y  LI G  +  K+ E   
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  EM+ RG+ P+ +TY+T+I   C  G +  +  +  +M   G  PNI ++ +L+ G  
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G    A++L + M ++G   NV  Y+++++G+C  G++++A+ +  +ME     P+  
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ +ID + + G++  A ++   M+  G  P VV +  ++   C   M      L+  M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   P+ +T+NT +K  C    ++   K+  +M+     P+  TYN L+ G  +   +
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           KEA+ L  E+ + G    + +YN ++    +   ++EA +L  +M   G   D   +N  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFF 719

Query: 487 IYAYCKQGKVNNAIQLLD 504
           +    ++G V   + L D
Sbjct: 720 VDMCYEEGDVEITLNLCD 737



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 200/411 (48%), Gaps = 9/411 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G+  E + V   L++M  + +     V+ ++I+ + ++G    A K F  +    + P
Sbjct: 340 KIGKSFEAEKV---LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISP 396

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               Y  ++       +      ++  M   G++P+  TY  L+   CK   +  A+ L 
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLH 456

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKE 178
            EM   G  P+ V+Y  ++  +CK G+++ A EL   MR       V +YN+++NG+CK 
Sbjct: 457 NEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKA 516

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             IE+A  L+ EM   GIDP+ ITY+T+I + C +G+++ +  +L +M  RG  P + +F
Sbjct: 517 GNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             L+ G+ + G   +   L   M+ +G +P+ + Y+TL+   C   SM+    +  +M  
Sbjct: 577 NVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+  TY+ LI G  KA NL  A  ++  MI  G  P V +Y  ++K   +     +
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILE 696

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           A  L E+M       +   +N F+      G V+  + L D+  + +CL N
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE-KCLLN 746



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 165/335 (49%), Gaps = 30/335 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+  ++   Q L  +M   G+   E  + ++I+ Y + G    A  +   + + G
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  Y  ++D L         N +   M++ G++ NV  YN ++  +CK   ++ A 
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL+ EM   G  PDA++YTT++ + C+LG +++A                        HK
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA------------------------HK 559

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 LL EM+DRG+ P V+T++ +++  C +G +E    +LG M  +G  P+  ++ +
Sbjct: 560 ------LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+K + +    +  + ++ RM  +G  P+   Y+ LI G C   ++ EA  +  +M E  
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
             P VT+Y+ALI  F K   +L A +++  M  +G
Sbjct: 674 YVPTVTSYNALIKRFYKKKKILEARELFEEMRGHG 708



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 144/314 (45%), Gaps = 4/314 (1%)

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN +A+      L   G + EA  +  ++        V + +A +   A   N  G    
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIA--NNSEGIEMA 245

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
                  G S N  +Y  ++  LC+     +AH L+ +M F +  P+ V+++T I G C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G +  A+KL+D M+     PN  TYN ++  L ++ +  EA +++ E+    I  + V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y T++HG  + G V  A +   +ML +    D IT+  +I  + + GKV     L   + 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
             G   PD ++YT+L+   C +G M  AF    +M+  G+ PN  T+  L+  L  + G 
Sbjct: 426 SRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH-GE 483

Query: 568 LGPVYILDDIMANK 581
           L     L D M  K
Sbjct: 484 LDTANELLDEMRKK 497


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 258/492 (52%), Gaps = 6/492 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  +  IL +L+    +  +  +   M+  G+ P++ T +IL+   C   ++  ++ +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
           L ++   G  P+ +   T++  +C  G+V+++     + +A  F      Y  L+NGLCK
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +   A  LL  + DR   P+V+ YSTII  LC    V+ +  +  +M  RG  P++ +
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +T+L+ G+ L G+  EA  L N MI +   PN+  Y+TLI  LC  G + E+ ++   M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    P+V  YS L+DG+   G +  A QI+  M+  G +P+V +Y  ++  LC+     
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A +L+ +M  +N  P+TVT+++ I GLC  GR+   + L  +M       N+ TYN LL
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLL 367

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL +   + +A  L  ++++ GIQ N  TY  ++ G+C+ G + +   L   +L++G  
Sbjct: 368 DGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYC 427

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           +D  T+ ++I   CK+G  + A+ +  ++   G   P+ +++  ++  +       +A  
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAMKSKMEDNG-CIPNAVTFEIIIRSLLEKDENDKAEK 486

Query: 538 YLQKMLNEGICP 549
            L +M+ +G+ P
Sbjct: 487 LLHEMIAKGLLP 498



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 226/464 (48%), Gaps = 5/464 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM+ +G+         +IN +  +G    +  +  +I + G +P   I N ++  L 
Sbjct: 32  LSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLC 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +         +  +   G + +  +Y ILL  LCK      A KLL  + ++   PD V
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVV 151

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+TI+  +CK   V+EA +L     A      V  Y  LI G C   ++ EAF LL EM
Sbjct: 152 MYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEM 211

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I+PN+ TY+T+I +LC  G V+ S  +L  M  +G  P++  ++ L+ GY L G  
Sbjct: 212 ILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEV 271

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++  M++ G  P+V +Y+ +I+GLC    +DEA+++  +M   +  P+  TYS+L
Sbjct: 272 QKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSL 331

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +     +   M   G   N+V Y  ++  LC+N    +A +L  KM     
Sbjct: 332 IDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGI 391

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  T+   I GLC  GR+     L   +       ++ TY  ++ GL +     EA  
Sbjct: 392 QPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALA 451

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           + +++E  G   N VT+  I+  +       +A +LL +M+ +G
Sbjct: 452 MKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKG 495



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 210/406 (51%), Gaps = 5/406 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K E+    +   ++  +G    +  +  ++N   ++G    A+K+   I +   +P V +
Sbjct: 93  KGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVM 152

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ I+D L  +        +YS M   G+ P+V TY  L+   C   ++  A+ LL EM 
Sbjct: 153 YSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMI 212

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIE 182
            K   P+  +Y T++ ++CK G+V+E++  LA+    GV     +Y+ L++G C   +++
Sbjct: 213 LKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQ 272

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A  +   MV  G++P+V +Y+ II+ LC    V+ ++ +L +M  +   P+  +++SL+
Sbjct: 273 KAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLI 332

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    GR     DL   M   G   N+V Y++L+ GLC N ++D+A+++  +M+E    
Sbjct: 333 DGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQ 392

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN  TY+ALIDG  K G L     ++  ++  G   +V  YT M+  LC+  MF +A ++
Sbjct: 393 PNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAM 452

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             KM    C PN VTF   I+ L      D A KLL +M     LP
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 207/405 (51%), Gaps = 1/405 (0%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L +R    +  +  ++  L K         L  +M  +GI P+++T S +I+  C +G +
Sbjct: 2   LLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQM 61

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             S  +LG++   G  PN     +L+KG  L G   ++    ++++ +GF  + V+Y  L
Sbjct: 62  AFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGIL 121

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++GLC  G    A+ +   +E+ S  P+V  YS +IDG  K   +  A  +++ M + G 
Sbjct: 122 LNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+V+ YT ++   C      +A  L+ +M  +N  PN  T+NT I  LC  G+V  +  
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  M +    P++  Y+ L+DG   V  V++A ++   + + G+  ++ +YN I++G+C
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLC 301

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +   V EA  LL +ML +    D +T++ +I   CK G++   + L   +   G+   ++
Sbjct: 302 KGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQ-PANL 360

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++Y SLL G+C +  + +A     KM   GI PN  T+  L+  L
Sbjct: 361 VTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 190/374 (50%), Gaps = 15/374 (4%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P +I +  I+ SL  + +  T + +  QM  +G  P++ + + L+  +   G+   +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSM-------DEAVSVSYQMEENSCPPNVTTYSA 310
             ++++ G+ PN +  +TL+ GLC  G +       D+ V+  +QM++        +Y  
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQ-------VSYGI 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L++G  K G    A ++   +      P+VV Y+ ++  LC++ +  +A+ L  +M    
Sbjct: 121 LLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+ T I G C  G++  A  LL++M      PNI TYN L+D L +  +VKE+ 
Sbjct: 181 IFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L+  + K G++ ++V Y+ ++ G C  G V +A Q+   M+  G   D  ++NIII   
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK  +V+ A+ LL R        PD ++Y+SL+ G+C  G +       ++M + G   N
Sbjct: 301 CKGKRVDEAMNLL-REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPAN 359

Query: 551 FATWNVLVRSLFSN 564
             T+N L+  L  N
Sbjct: 360 LVTYNSLLDGLCKN 373



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 137/273 (50%), Gaps = 5/273 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   + LL  M  +GV     ++  +++ Y  VG  ++A ++F  + + G
Sbjct: 226 LIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN I++ L    R      +   M    M P+  TY+ L+  LCK  R+    
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTIL 345

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
            L  EM ++G   + V+Y +++  +CK   +++A  L M+    G+      Y ALI+GL
Sbjct: 346 DLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++   L   ++ +G   +V TY+ +IS LC  G  + +L +  +M   GC PN 
Sbjct: 406 CKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNA 465

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            +F  +++  L      +A  L + MI +G LP
Sbjct: 466 VTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/511 (29%), Positives = 260/511 (50%), Gaps = 10/511 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PTV  YN ++D      R ++   ++    + G++ +V   +ILLK L    R D    L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 123 LVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSG-----VSVYNALING 174
           L+  M   G  PD +SY T+V ++C+  + + A +L   M   SG     V  YN +I+G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L +E ++ +A  L  EM+ +G+ P+V+TY++II +LC    ++ +  +L QM   G  PN
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++  ++ GY + G+  E + ++  M  +G +PN+V  ++ +  LC +G   EA     
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M      PN+ TYS L+ G+A  G  +    ++N M  NG   +   +  ++    +  
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +   +  +M  +   P+  T+   I      GR+  AM   +QM      P    Y+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            L+ G      + +A ELV+E+   GI + NIV +N+I++ +C+ G VVEA  +   ++ 
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G + D ITFN +I  Y   GK+  A  +LD +   G   PD++SY +L+ G C +G + 
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAG-IEPDVVSYNTLIDGYCRNGRID 595

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +  I   +ML++G+ P   T+ +++  LF++
Sbjct: 596 DGLILFGEMLSKGVKPTTITYGIILHGLFND 626



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 260/520 (50%), Gaps = 11/520 (2%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM--KRDGMEPNVFTYNILLKA 109
           + +R+ E G++P    YN ++  L  ++R      +   M  K  G  PNV TYN ++  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGS 163
           L +   V  A  L  EM  +G  PD V+YT+I+ ++CK   +++A EL +R      F  
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA-ELVLRQMISNGFQP 295

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               YN +I+G     + +E   +  EM  +G+ PN++T ++ +SSLC  G  + +    
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +G  PN+ +++ LL GY   G   +  +L+N M   G + +   ++ +I      
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKR 415

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G MDE + +  QM+E    P+  TY  +I  F++ G L  A   +N+MI+ G  P  + Y
Sbjct: 416 GMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVY 475

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCP-PNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
             +++  C +    +A  L+ +M     P PN V FN+ I  LC  GRV  A  + D + 
Sbjct: 476 HSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVI 535

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                P++ T+N L+DG   V ++++AF ++  +   GI+ ++V+YNT++ G CR G + 
Sbjct: 536 HIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRID 595

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +   L G+ML +G K   IT+ II++     G+   A ++   +   G    DI +   +
Sbjct: 596 DGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG-TTMDISTCGII 654

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           L G+C +    EA    +K+    +  N A  N ++ +++
Sbjct: 655 LGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMY 694



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/475 (26%), Positives = 246/475 (51%), Gaps = 6/475 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S ++S  + G +++A + F  +   G KP +  Y+ +L     E  F  +  ++++M+ +
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGN 396

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+  +   +NI++ A  K   +D    +  +M  +G  PDA +Y  ++++  ++G++ +A
Sbjct: 397 GIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADA 456

Query: 155 RE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID-PNVITYSTIIS 208
            +     +AM       VY++LI G C    + +A  L+ EM+ RGI  PN++ +++II+
Sbjct: 457 MDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIIN 516

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           SLC  G V  +  I   +   G  P++ +F SL+ GY L G+  +A  + + MI  G  P
Sbjct: 517 SLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEP 576

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +VV+Y+TLI G C NG +D+ + +  +M      P   TY  ++ G    G  +GA ++ 
Sbjct: 577 DVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMC 636

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + MI +G + ++     ++  LC+NN   +A ++ +K+   N   N    NT I  +   
Sbjct: 637 HEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKV 696

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            + + A +L D +     +PN +TY  ++  LL+   V+EA  + + +EK G   +    
Sbjct: 697 RKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N I+  +   G +V+A   + K+  +   L+A T ++++  + ++GK    ++LL
Sbjct: 757 NYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 250/554 (45%), Gaps = 9/554 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LL  M  +   CS  V  + +VI+   R G   +A  +F+ + + G+ P V  Y  I+DA
Sbjct: 212 LLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDA 271

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           +   M  +G +PN  TYN ++     + +      +  EM ++G  P+
Sbjct: 272 LCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPN 331

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+  + +SS+CK G+ +EA E      A      +  Y+ L++G   E    +   L  
Sbjct: 332 IVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN 391

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M   GI  +   ++ +I +    G ++ ++ I  QM  +G  P+  ++  ++  +   G
Sbjct: 392 SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTY 308
           R  +A D +N+MI  G  P  + Y +LI G C +G++ +A  +  +M     P PN+  +
Sbjct: 452 RLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFF 511

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +++I+   K G ++ A  I++ +I  G  P+V+ +  ++          +A  +++ M  
Sbjct: 512 NSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMIS 571

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+ V++NT I G C  GR+D  + L  +M      P   TY  +L GL    R   
Sbjct: 572 AGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVG 631

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A ++  E+ + G  ++I T   IL G+CR     EA  +  K+     K +    N +I 
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMID 691

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A  K  K   A +L D I   G   P+  +Y  ++  +   G ++EA      M   G  
Sbjct: 692 AMYKVRKREEAKELFDSISATG-LVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCA 750

Query: 549 PNFATWNVLVRSLF 562
           P+    N ++R L 
Sbjct: 751 PSSRLLNYIIRVLL 764



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 16/220 (7%)

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGL--------CGCGRVDWAMKLLDQMKQYEC-- 406
             AH L +++  +  P    + N F   L        C  G    A+ L +++ + E   
Sbjct: 54  EDAHHLFDELLRQTIPVPERSLNGFFTALARAPSSAACRDGP-SLAVALFNRICREEARP 112

Query: 407 ---LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              LP + TYN L+D   R  R    F L     K G++++++  + +L  +  A    +
Sbjct: 113 RVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDD 172

Query: 464 AFQLLGKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTS 521
              LL   + E G + D I++N ++   C+  +   A+ LL   ++  G  +P++++Y +
Sbjct: 173 VVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNT 232

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ G+   G + +A     +M+ +G+ P+  T+  ++ +L
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDAL 272


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/417 (32%), Positives = 224/417 (53%), Gaps = 15/417 (3%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G   QAL++F R     L  +   YN ++      +       +   M  +GM+ N  
Sbjct: 3   RAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDR 61

Query: 102 TYNILLKALCKNNRVDGA---YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           T +I+L+ LC+  RV  A   +   +E+ +    PD VSYTT+++ +CKLG+V+ A +L 
Sbjct: 62  TTSIILQGLCRCGRVAQALEHFDASLELAHA--QPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 159 MRFGSG------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            +  +          YNAL++GLCK+ +++ A  ++ E   R   P+V+TY+T++++L  
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G V+ +L    QM   G  P + SF +++ G     R  +A +++N MI   F PN+V 
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS +I GLC +  +DEA  +  +M    C P++  Y+ L+ GF+ AG L  A  +  RM+
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S GC P+VV YT ++  LC+      AH +  ++    C PN VT++  I G C   RVD
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
              K+   M++  C PN+ TYN ++ GL  V+R +EA+ +  E+ +CG   +  TY 
Sbjct: 360 EGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 200/383 (52%), Gaps = 10/383 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIY 68
           ++D    LL++M VEG+ C++     ++    R G   QAL+ F    E    +P V  Y
Sbjct: 40  DLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSY 99

Query: 69  NHILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
             +++ L    R      ++  M    G  PN FTYN L+  LCK +R+D A  ++ E  
Sbjct: 100 TTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEAR 159

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIE 182
            +  APD V+Y T+++++ +LG+V+EA     +     +   +  +NA+I GLC+  ++ 
Sbjct: 160 KRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLA 219

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A  +  EM+DR   PN++TYS +I  LC    ++ +  +L +M   GC P++ ++T L+
Sbjct: 220 DALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLV 279

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+   GR   A  L  RM+ +G +P+VV Y+ +I  LC  G +D+A  +  ++  N C 
Sbjct: 280 LGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 339

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PNV TYSALI G+ +A  +    ++   M    C PNVV Y  M+  L   +   +A+ +
Sbjct: 340 PNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGM 396

Query: 363 IEKMAFENCPPNTVTFNTFIKGL 385
             +M+     P+  T+    + L
Sbjct: 397 FREMSECGFVPDARTYRGLKRAL 419



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 222/461 (48%), Gaps = 69/461 (14%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TYN+L++  C  + +D A+ LL EM  +G   +  + + I+  +C+ G+V +A E    F
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALE---HF 83

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
            + + + +A                           P+V++Y+T+I+ LC +G V+ +  
Sbjct: 84  DASLELAHA--------------------------QPDVVSYTTLINGLCKLGRVDAAFD 117

Query: 222 ILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
           +  +M   G C PN  ++ +L+ G     R   A  +     +  F P+VV Y+TL+  L
Sbjct: 118 LFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAAL 177

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              G +DEA++   QM E    P + +++A+I G  +A  L  A +++N MI     PN+
Sbjct: 178 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 237

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y+ ++  LC+++   +A  L+++M  E C P+ V +   + G    GR+D A+ LL +
Sbjct: 238 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 297

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M    C+P++ TY  ++D L +V RV +A E+  E+       N+VTY+ ++ G CRA  
Sbjct: 298 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 357

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V E  +++ +M                   C+                     P++++Y 
Sbjct: 358 VDEGGKVMREMA------------------CR---------------------PNVVTYN 378

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +++WG+      +EA+   ++M   G  P+  T+  L R+L
Sbjct: 379 TMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 169/314 (53%), Gaps = 5/314 (1%)

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ LI G C+   +D A S+  +M+      N  T S ++ G  + G +  A + ++ 
Sbjct: 26  VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85

Query: 331 MIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGC 388
            +      P+VV+YT ++  LC+      A  L  KM A   C PN  T+N  + GLC  
Sbjct: 86  SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            R+D A  ++ + ++ +  P++ TYN L+  L ++ RV EA    T++ + G    +V++
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N I+ G+CRA  + +A ++  +M+      + +T++++I   CK  +++ A QLLDR+  
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G   PD+++YT L+ G   +G +  A   L++M+++G  P+  T+ V++  L   +G +
Sbjct: 266 EG-CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKL-CKVGRV 323

Query: 569 GPVY-ILDDIMANK 581
              + I  +++ANK
Sbjct: 324 DDAHEIFRELVANK 337



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++  +D  + ++ + +    +     + +++ +  ++G  ++AL  F ++ E G
Sbjct: 138 LVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 197

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT+  +N I+  L    R +    +++ M      PN+ TY++++  LCK++++D A 
Sbjct: 198 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 257

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +LL  M ++GC PD V+YT +V      G+++ A  L  R  S      V  Y  +I+ L
Sbjct: 258 QLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKL 317

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A  +  E+V     PNV+TYS +I   C    V+    ++ +M    C PN+
Sbjct: 318 CKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNV 374

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            ++ +++ G  +  R  EA  ++  M   GF+P+   Y  L   L
Sbjct: 375 VTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 2/143 (1%)

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           ++R     +A +L  E   C +  + VTYN ++ G C A  +  AF LL +M +EG + +
Sbjct: 1   MVRAGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T +II+   C+ G+V  A++  D         PD++SYT+L+ G+C  G +  AF   
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 540 QKMLNEGIC-PNFATWNVLVRSL 561
           +KM+  G C PN  T+N LV  L
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGL 142



 Score = 47.4 bits (111), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 32/182 (17%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q LL +M  EG       +  ++  +   G  + AL +  R+   G
Sbjct: 243 VIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQG 302

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSN------------------------------ 90
             P V  Y  ++D L    R    + I+                                
Sbjct: 303 CIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGG 362

Query: 91  --MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             M+     PNV TYN ++  L   +R + AY +  EM   G  PDA +Y  +  ++  +
Sbjct: 363 KVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMI 422

Query: 149 GQ 150
            Q
Sbjct: 423 DQ 424


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 258/534 (48%), Gaps = 40/534 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+  GV  S      +     RVG      K+F  +   G +P    ++ I+    
Sbjct: 8   ILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFC 67

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    +   +   M +   EPN F YNI++ A C   R   A      M  +GC P  V
Sbjct: 68  RKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVV 127

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ T++++ CK G V EAR+L      M F     +YN L+NG  K  +I++A  L  EM
Sbjct: 128 TFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 187

Query: 192 VDRGIDPNVITYSTIISS-----------------------------------LCDVGNV 216
             +GI P+ IT++ ++S                                    LC  G +
Sbjct: 188 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 247

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M  +G +P+I +F S++  Y   G   +A + +  M+  G  P+    S+L
Sbjct: 248 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 307

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GL  NG + EA  +  QM E     N   ++ L+D F K G+++GA  +W  M   G 
Sbjct: 308 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 367

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VVA++  +  L +  +  +A+++  +M  +   PN   +N+ I G C CG+++ A+K
Sbjct: 368 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 427

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L   M+    LP+I T N ++ GL +  R++ A  +  ++ + G+  +I+TYNT+++G C
Sbjct: 428 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 487

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +A  +V A  L+ +M   G+  D  T+NI I+ +C   ++N A+ +LD +   G
Sbjct: 488 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 541



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 198/415 (47%), Gaps = 5/415 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F +VIN++ + G   +A K+F  ++E G  P   +YN +++  +        N +Y  M
Sbjct: 128 TFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 187

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           ++ G+ P+  T+NIL+    K  R +   +LL ++   G  PD   +   VS +C  G++
Sbjct: 188 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 247

Query: 152 EEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +EA E  M          +  +N++I    +    ++AF     MV  G+ P+  T S++
Sbjct: 248 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 307

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +  L   G ++ +  ++GQM  +G + N  +FT LL  +   G    A  LW  M R G 
Sbjct: 308 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 367

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+VVA+S  I GL   G ++EA +V  +M      PN   Y++LI GF K G L  A +
Sbjct: 368 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 427

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M   G  P++     ++  LC+      A ++   M      P+ +T+NT I G C
Sbjct: 428 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 487

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
               +  A  L+++M      P++TTYN  + G     R+  A  ++ E+   GI
Sbjct: 488 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 542



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 208/428 (48%), Gaps = 6/428 (1%)

Query: 155 RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           RE+ +R   SGV++   L   L +       + L  +++ RG  P   T+S II   C  
Sbjct: 13  REVGVRPSASGVAI---LFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRK 69

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +     +L  M    C PN  ++  ++    + GRT +A   +N MI  G  P VV +
Sbjct: 70  GCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTF 129

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +T+I+  C  G++ EA  +   ++E    PN   Y+ L++G+ K   +  A+ ++  M  
Sbjct: 130 NTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRK 189

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G +P+ + +  +V    +         L++ ++     P+   F+  + GLC  GR+D 
Sbjct: 190 KGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDE 249

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM+ L  M +    P+I  +N ++    +     +AFE    +   G+  +  T +++L 
Sbjct: 250 AMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLM 309

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+   G + EA +L+G+M+ +G  ++ + F +++  + K+G V  A  L   +   G + 
Sbjct: 310 GLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIF- 368

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           PD++++++ + G+   G ++EA+    +ML +G+ PN   +N L+   F   G L     
Sbjct: 369 PDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICG-FCKCGKLNEALK 427

Query: 574 LDDIMANK 581
           L+ +M ++
Sbjct: 428 LEKVMRHR 435



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 145/312 (46%), Gaps = 12/312 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D     L  M  +G+S S   F SVI +Y + GL ++A + +  +  FGL P+    +
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 305

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L    R      +   M   G+  N   + +LL    K   V GA  L  EM  +
Sbjct: 306 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEA 184
           G  PD V+++  +  + K G VEEA  +    +R G       YN+LI G CK  K+ EA
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M  RG+ P++ T + II  LC  G + +++ +   M   G +P+I ++ +L+ G
Sbjct: 426 LKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLING 485

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM-------DEAVSVSYQME 297
           Y        A +L NRM   G  P++  Y+  IHG CS+  M       DE VS      
Sbjct: 486 YCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILSF 545

Query: 298 ENSCPPNVTTYS 309
             +CPP +  ++
Sbjct: 546 SFACPPTLNAHT 557



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 5/201 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K  ++ ++ G Q L  +M+  G+      F + I+   + GL E+A  +F  +   G
Sbjct: 342 LLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKG 401

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++       + +    +   M+  G+ P++FT N+++  LCK  R+  A 
Sbjct: 402 LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAI 461

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSG----VSVYNALINGL 175
            + ++M   G +PD ++Y T+++  CK   +  A  L  R + SG    ++ YN  I+G 
Sbjct: 462 NVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGF 521

Query: 176 CKEHKIEEAFWLLCEMVDRGI 196
           C   ++  A  +L E+V  GI
Sbjct: 522 CSSRRMNRAVLMLDELVSAGI 542



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 36/235 (15%)

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +I  RM   G  P+      + K+L +   +     L + +      P   TF+  I 
Sbjct: 5   ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  G +     LL  M ++ C PN                   AF             
Sbjct: 65  GFCRKGCIHLGESLLHLMPKFHCEPN-------------------AF------------- 92

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
               YN +++  C  G   +A      M+  G     +TFN +I A+CK+G V  A +L 
Sbjct: 93  ---AYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLF 149

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           D ++  G ++P+ I Y +L+ G      + +A +  ++M  +GI P+  T+N+LV
Sbjct: 150 DGLKEMG-FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILV 203


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 273/528 (51%), Gaps = 12/528 (2%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           V + +   ++ Y  + +G  P    ++     L+     S    +   +   G+   V +
Sbjct: 170 VKMTQFTHRLIYTYKYWGPNPIA--FDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDS 227

Query: 103 YNILLKALCKNNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            N  L  +  N+  ++ A K+  E G    + +  SY  I+ S+C+LG+V+EA  L M+ 
Sbjct: 228 CNAFLSRIANNSEGIEMAIKVFCEYG---ISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM 284

Query: 162 G-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y+ +I+G C   ++++A  L+ +M  +G+ PN  TY++II  LC +G  
Sbjct: 285 DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKS 344

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +L +M  +   P+   +T+L+ G+   G    A+  ++ M+ +   P+ + Y+TL
Sbjct: 345 FEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTL 404

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G    G + E  ++ ++M      P+  TY+ LID + KAG ++ A  + N M+  G 
Sbjct: 405 IQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +PN+V Y  ++  LC++     A+ L+++M  +    N   +N+ + G+C  G ++ A+K
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+ +M+     P+  TY  ++D   R+  + +A +L+ E+   G+Q  +VT+N +++G C
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
             GM+ +  +LLG ML +G   DAIT+N ++  +C +  +N   ++  R+R  G   PD 
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV-APDS 643

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +Y  L+ G C +  ++EA+   ++M+ +G  P   ++N L++  +  
Sbjct: 644 NTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 260/522 (49%), Gaps = 10/522 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR-FSMINPIYSNMKRDGMEPNVF 101
           +G   +A K+  ++  +GL  TV   N  L  +   +    M   ++      G+  N  
Sbjct: 203 IGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEY---GISWNTT 259

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--- 158
           +YNI++ +LC+  +V  A++LL++M  +   PD VSY+T++   C LG++++A +L    
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 159 --MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      YN++I  LCK  K  EA  +L EM+ + I P+ + Y+T+I     +G+V
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            T+     +M  +  +P+  ++T+L++G+  GG+  E  +L++ MI  G  P+ V Y+TL
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I   C  G M  A S+  +M +    PN+ TY ALIDG  K G L  A+++ + M   G 
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             NV  Y  MV  +C+     QA  L+++M      P+ +T+ T I   C  G +D A K
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +M      P + T+N L++G   +  +++   L+  + + GI  + +TYNT++   C
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHC 619

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               +    ++  +M  +G   D+ T+NI+I  +CK   +  A  L   +   G + P +
Sbjct: 620 IRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG-YVPTV 678

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            SY +L+          EA    ++M   G+  +   +N  V
Sbjct: 679 TSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFV 720



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 240/498 (48%), Gaps = 5/498 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +G++  ++     G+S +   +  +I S  R+G  ++A ++  ++      P V  Y+ +
Sbjct: 240 EGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTV 299

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D             +  +M+  G++PN +TYN ++  LCK  +   A K+L EM ++  
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            PD V YTT++    KLG V  A +     L+ +       Y  LI G  +  K+ E   
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  EM+ RG+ P+ +TY+T+I   C  G +  +  +  +M   G  PNI ++ +L+ G  
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G    A++L + M ++G   NV  Y+++++G+C  G++++A+ +  +ME     P+  
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ +ID + + G++  A ++   M+  G  P VV +  ++   C   M      L+  M
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   P+ +T+NT +K  C    ++   K+  +M+     P+  TYN L+ G  +   +
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           KEA+ L  E+ + G    + +YN ++    +     EA +L  +M   G   D   +N  
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFF 719

Query: 487 IYAYCKQGKVNNAIQLLD 504
           +    ++G V   + L D
Sbjct: 720 VDMCYEEGDVEITLNLCD 737



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 201/411 (48%), Gaps = 9/411 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G+  E + V   L++M  + +     V+ ++I+ + ++G    A K F  +    + P
Sbjct: 340 KIGKSFEAEKV---LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISP 396

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
               Y  ++       +      ++  M   G++P+  TY  L+   CK   +  A+ L 
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLH 456

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKE 178
            EM   G  P+ V+Y  ++  +CK G+++ A EL   MR       V +YN+++NG+CK 
Sbjct: 457 NEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKA 516

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             IE+A  L+ EM   GIDP+ ITY+T+I + C +G+++ +  +L +M  RG  P + +F
Sbjct: 517 GNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTF 576

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             L+ G+ + G   +   L   M+ +G +P+ + Y+TL+   C   SM+    +  +M  
Sbjct: 577 NVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRN 636

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+  TY+ LI G  KA NL  A  ++  MI  G  P V +Y  ++K   +   F +
Sbjct: 637 QGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXE 696

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           A  L E+M       +   +N F+      G V+  + L D+  + +CL N
Sbjct: 697 ARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE-KCLLN 746



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 163/335 (48%), Gaps = 30/335 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+  ++   Q L  +M   G+   E  + ++I+ Y + G    A  +   + + G
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  Y  ++D L         N +   M++ G++ NV  YN ++  +CK   ++ A 
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL+ EM   G  PDA++YTT++ + C+LG +++A                        HK
Sbjct: 524 KLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKA------------------------HK 559

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 LL EM+DRG+ P V+T++ +++  C +G +E    +LG M  +G  P+  ++ +
Sbjct: 560 ------LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+K + +    +  + ++ RM  +G  P+   Y+ LI G C   ++ EA  +  +M E  
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
             P VT+Y+ALI  F K      A +++  M  +G
Sbjct: 674 YVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHG 708



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 144/314 (45%), Gaps = 4/314 (1%)

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN +A+      L   G + EA  +  ++        V + +A +   A   N  G    
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIA--NNSEGIEMA 245

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
                  G S N  +Y  ++  LC+     +AH L+ +M F +  P+ V+++T I G C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G +  A+KL+D M+     PN  TYN ++  L ++ +  EA +++ E+    I  + V 
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y T++HG  + G V  A +   +ML +    D IT+  +I  + + GKV     L   + 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
             G   PD ++YT+L+   C +G M  AF    +M+  G+ PN  T+  L+  L  + G 
Sbjct: 426 SRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKH-GE 483

Query: 568 LGPVYILDDIMANK 581
           L     L D M  K
Sbjct: 484 LDTANELLDEMRKK 497


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 257/506 (50%), Gaps = 9/506 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ +V+ +N ++D        S    +   MK +G  P++ TYN L+   CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KL+ E+      P+ ++YTT++ + CK   +E+A     E+ ++     V  Y  ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+EEA  +  EM + G+ PN  +Y+T+I SL   GNV  +  + G+M VRG   ++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+L+ G    G  + A D++  ++ E  +PN V YS LI G C  G +++   +  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE    PNV  YS+++DG+ K G L  A  +  +M+     PNV  Y  ++    + + 
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M       N    ++F+  L   GR++ A +L   M     LP+   Y  
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV-VEAFQLLGKMLIE 474
           ++DG  +  +  +AF +  E+ +     ++V YN +++G+ + G    E+F    + L  
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL-- 430

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D+ TFN +I AYCK+G + NA++LL+ ++  G   P+ I+   L+  +C +G +++
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG-LKPNSITCNILVQRLCAAGEIEK 489

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRS 560
               L  ML  G  P   T   ++ +
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 270/592 (45%), Gaps = 42/592 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI     LL+ MK EG +     + +++N + ++G    A K+   I    L+P V  Y 
Sbjct: 32  EISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYT 91

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA            +Y  M    + P+V TY  ++  LCK+ +V+ A  +  EM   
Sbjct: 92  TLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV 151

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  P+  SY T++ S+ K G V EA  L  R      G  V VY AL++GL K      A
Sbjct: 152 GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA 211

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +   +++  + PN +TYS +I   C +G+V     +L +M  +   PN+  ++S++ G
Sbjct: 212 EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG------------------------- 279
           Y   G  +EA D+  +M++   LPNV  Y TLI G                         
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN 331

Query: 280 ----------LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
                     L  +G M+EA  +   M      P+   Y++++DGF KAG    A  I  
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQ 391

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M       +VVAY  ++  L +   + ++ S    M      P++ TFNT I   C  G
Sbjct: 392 EMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A+KLL++MK Y   PN  T N L+  L     +++  +L+ ++   G      T+ 
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK 510

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +L    ++           +++  G KLD  T+N +I  +C+ G +  A  +   + G 
Sbjct: 511 AVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK 570

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G    DII+Y +L+ G C S  +++AF    +ML EG+ PN  T+N+L+  L
Sbjct: 571 GIL-ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 252/548 (45%), Gaps = 7/548 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           Y+  +M V+ +      +  ++N   + G  E+A  +F  + E G+ P    Y  ++D+L
Sbjct: 108 YMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL 167

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E   +    +   M   G+  +V  Y  L+  L K    + A  +   +  +   P+ 
Sbjct: 168 FKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNC 227

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCE 190
           V+Y+ ++   CKLG V +   L            V VY+++++G  K+  + EA  ++ +
Sbjct: 228 VTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRK 287

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV R I PNV  Y T+I           +L +  +M  RG   N     S +      GR
Sbjct: 288 MVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGR 347

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L+  M+  G LP+ V Y++++ G    G   +A +++ +M E S   +V  Y+ 
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI+G  K G     S     M   G +P+   +  M+   C+      A  L+ +M    
Sbjct: 408 LINGLFKLGKYESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN++T N  ++ LC  G ++  M LL+ M      P  TT+  +LD   +  R     
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
               ++   G++L++ TYNT++   CR GM+  A  +   M+ +G   D IT+N +I+ Y
Sbjct: 527 HXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C    +  A  +  ++   G  +P++ +Y  LL G+  +  ++EA   + +M   G+ PN
Sbjct: 587 CISSHLKKAFAVHSQMLTEG-VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645

Query: 551 FATWNVLV 558
             T+++LV
Sbjct: 646 ATTYDILV 653



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 209/399 (52%), Gaps = 1/399 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  +N LI+G C+  +I  A  LL  M   G  P+++TY+T+++  C +G++ T+  ++G
Sbjct: 17  VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           ++ +    PN+ ++T+L+  Y       +A  +++ M  +  +P+VV Y+ +++GLC +G
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            ++EA SV  +MEE    PN  +Y+ LID   K GN+  A  +  RM+  G   +VV YT
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  L +  M + A  + + +  E+  PN VT++  I G C  G V+    LL +M++ 
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+  Y+ ++DG  +   + EA +++ ++ +  I  N+  Y T++ G  +A     A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L  +M   G + +    +  +    + G++  A +L   +   G   PD ++YTS++ 
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL-PDRVNYTSMMD 375

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           G   +G   +AF   Q+M  +    +   +NVL+  LF 
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK 414



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/554 (23%), Positives = 249/554 (44%), Gaps = 54/554 (9%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ++  + LLQ+M+ + +  +  V+ S+++ Y + GL  +A+ +  ++ +  + P
Sbjct: 239 KLGD---VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILP 295

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V +Y  ++D     ++  +   ++  MK  G+E N F  +  +  L ++ R++ A +L 
Sbjct: 296 NVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR----------------------- 160
            +M ++G  PD V+YT+++    K G+  +A  +A                         
Sbjct: 356 KDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 161 -------FGSGV---------SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
                  F +G+         + +N +IN  CKE  +  A  LL EM   G+ PN IT +
Sbjct: 416 GKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++  LC  G +E ++ +L  M V G +P   +  ++L       R        ++++  
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGM 535

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   ++  Y+TLI   C  G +  A  V   M       ++ TY+ALI G+  + +L  A
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             + ++M++ G SPNV  Y  ++  L    +  +A  L+ +M      PN  T++  + G
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
               G +   +KL  +M     +P   TYN L+    +  ++ +A EL+ E++  GI  N
Sbjct: 656 HGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPN 715

Query: 445 IVTYNTILHGVCRAGMVVE-------AFQLLGKMLIEGTKLDAI-----TFNIIIYAYCK 492
             TY+ ++ G  +     E       ++Q   K L E            T   I +   K
Sbjct: 716 SSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAK 775

Query: 493 QGKVNNAIQLLDRI 506
            GK  +A ++L+++
Sbjct: 776 PGKKADAQRILNKL 789



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 101/181 (55%), Gaps = 2/181 (1%)

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+  +  E   ++  +N L+DG  R   +  A EL+  ++  G   +IVTYNT+++G C+
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G +  A +L+G++ +   + + IT+  +I AYCK   + +A+ + D +       PD++
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKS-LVPDVV 123

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +YT ++ G+C SG ++EA    ++M   G+ PN  ++  L+ SLF   G++   ++L   
Sbjct: 124 TYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE-GNVAEAFVLQGR 182

Query: 578 M 578
           M
Sbjct: 183 M 183



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 141/343 (41%), Gaps = 42/343 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++++L    EI+    LL  M V G   +     +V+++  +   A+  L    ++   G
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMG 536

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  +  YN ++              ++ +M   G+  ++ TYN L+   C ++ +  A+
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  +M  +G +P+                              V  YN L+ GL     
Sbjct: 597 AVHSQMLTEGVSPN------------------------------VETYNILLGGLSAARL 626

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I+EA  L+ +M +RG+ PN  TY  ++S    +GN++  + +  +M  +G  P   ++  
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG---LCSNGSMDEAVSVSYQ-- 295
           L+  +  G +  +A +L   M   G  PN   Y  LI G   L     +++++  SYQ  
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE 746

Query: 296 -------MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
                  M E    P   T + +    AK G    A +I N++
Sbjct: 747 AKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 247/525 (47%), Gaps = 45/525 (8%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A QA + F+ +      P +  + H+L  L     +S +  +Y+ M+  G+ P+  T NI
Sbjct: 77  AIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNI 136

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           LL  LC  NRV     ++  +  +G  PD V+YTT                         
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTT------------------------- 171

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
                LI GLC EH+I +A  L   M   G  PN ITY T++  LC  GN+  +L +  +
Sbjct: 172 -----LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQE 226

Query: 226 MF----VRGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           M     + G N  P + S++ ++       R  EA DL+  M  +G  P V++Y++L+  
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM-- 284

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
                  +EA  +  +M      PNV T++ LID   K G ++ A  +   MI  G  PN
Sbjct: 285 ------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 338

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           ++ Y  +++  C     + A  L   M  + C P+ + +   I G C   +V+ AMKL +
Sbjct: 339 LLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 398

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M Q    P++ TY  LL GL +  +V +A +L   ++  GI  ++  Y   L+G+C+ G
Sbjct: 399 GMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 458

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA +L  K+     KLD   FN +I   CK GK+  A +L +++    E  PD+++Y
Sbjct: 459 CLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKL-PQEELQPDVVTY 517

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             ++   C  G + +A I  QKM   G  P+  T+  L+R  F +
Sbjct: 518 NIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFES 562



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 242/482 (50%), Gaps = 19/482 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  +++   ++    Q   ++ ++R  G+ P     N +L+ L   NR      + + + 
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G  P++ TY  L+K LC  +R+  A  L   M   GC P+A++Y T++  +C+ G + 
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218

Query: 153 EAREL-----------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            A +L            + F   V  Y+ +I+ LCK+ + +EA  L  EM  +G+ P VI
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           +Y++++         E +  +  +M  +G  PN+ +F  L+      G+  EA DL   M
Sbjct: 279 SYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 330

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I+ G +PN++ Y++LI G C  G ++ A  +   M    C P+V  Y+ LI+G+ K   +
Sbjct: 331 IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKV 390

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A +++N M+  G  P+V  Y  ++  L Q      A  L   M     P +   +  F
Sbjct: 391 EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIF 450

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GLC  G +  AM+L +++K Y    +I  +N L+DGL +  +++ A+EL  ++ +  +
Sbjct: 451 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 510

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           Q ++VTYN ++H  CR G VV+A  L  KM   G   D IT+  +I  + +  K+   ++
Sbjct: 511 QPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVE 570

Query: 502 LL 503
           LL
Sbjct: 571 LL 572



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 240/481 (49%), Gaps = 25/481 (5%)

Query: 14  VQYLLQQMKVEGVS---CSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           V YL  QM++ G+S   C+  + ++ + +  RVG   + L +   I   G  P +  Y  
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVG---EGLAVMAGILRRGYIPDIVTYTT 171

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L  E+R S    +++ M++ G  PN  TY  L+K LC+   +  A KL  EM N  
Sbjct: 172 LIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDS 231

Query: 131 C------APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
                   P  +SY+ I+ ++CK  + +EAR+L            V  Y +L+       
Sbjct: 232 SLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM------- 284

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
             EEA  L  EMV++G+ PNV+T++ +I  LC  G V  +  +L  M  RG  PN+ ++ 
Sbjct: 285 -WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 343

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL++G+ L G  + A +L+  M  +G  P+V+ Y+ LI+G C    ++EA+ +   M + 
Sbjct: 344 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 403

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P+V TY AL+ G  + G +  A +++  M   G   ++  Y   +  LC+N    +A
Sbjct: 404 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 463

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L  K+   N   +   FN  I GLC  G+++ A +L +++ Q E  P++ TYN ++  
Sbjct: 464 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 523

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             R  +V +A  L  ++EK G   + +TY T++ G   +  + +  +LL  M+     LD
Sbjct: 524 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583

Query: 480 A 480
            
Sbjct: 584 V 584



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 130/269 (48%), Gaps = 5/269 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   + LL+ M   G+  +   + S+I  +  VG    A ++F  +   G
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  Y  +++     ++      +Y+ M + G  P+V TY  LL  L +  +V  A 
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 429

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KL   M   G   D   Y   ++ +CK G + EA EL  +  S      +  +N LI+GL
Sbjct: 430 KLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 489

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+E A+ L  ++    + P+V+TY+ +I   C  G V  +  +  +M   GC P+ 
Sbjct: 490 CKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDK 549

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++ +L++G+    +  +  +L + M++ 
Sbjct: 550 ITYATLIRGFFESKKLEKVVELLHMMVQR 578


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 257/506 (50%), Gaps = 9/506 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ +V+ +N ++D        S    +   MK +G  P++ TYN L+   CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KL+ E+      P+ ++YTT++ + CK   +E+A     E+ ++     V  Y  ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+EEA  +  EM + G+ PN  +Y+T+I SL   GNV  +  + G+M VRG   ++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+L+ G    G  + A D++  ++ E  +PN V YS LI G C  G +++   +  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE    PNV  YS+++DG+ K G L  A  +  +M+     PNV  Y  ++    + + 
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M       N    ++F+  L   GR++ A +L   M     LP+   Y  
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV-VEAFQLLGKMLIE 474
           ++DG  +  +  +AF +  E+ +     ++V YN +++G+ + G    E+F    + L  
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL-- 430

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D+ TFN +I AYCK+G + NA++LL+ ++  G   P+ I+   L+  +C +G +++
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG-LKPNSITCNILVQRLCAAGEIEK 489

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRS 560
               L  ML  G  P   T   ++ +
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVLDA 515



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 271/592 (45%), Gaps = 42/592 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI     LL+ MK EG +     + +++N + ++G    A K+   I    L+P V  Y 
Sbjct: 32  EISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYT 91

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA            +Y  M    + P+V TY  ++  LCK+ +V+ A  +  EM   
Sbjct: 92  TLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV 151

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  P+  SY T++ S+ K G V EA  L  R      G  V VY AL++GL K      A
Sbjct: 152 GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA 211

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +   +++  + PN +TYS +I   C +G+V     +L +M  +   PN+  ++S++ G
Sbjct: 212 EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG------------------------- 279
           Y   G  +EA D+  +M++   LPNV  Y TLI G                         
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN 331

Query: 280 ----------LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
                     L  +G M+EA  +   M      P+   Y++++DGF KAG    A  I  
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQ 391

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M       +VVAY  ++  L +   + ++ S    M      P++ TFNT I   C  G
Sbjct: 392 EMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A+KLL++MK Y   PN  T N L+  L     +++  +L+ ++   G      T+ 
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK 510

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +L    ++        +  +++  G KLD  T+N +I  +C+ G +  A  +   + G 
Sbjct: 511 AVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK 570

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G    DII+Y +L+ G C S  +++AF    +ML EG+ PN  T+N+L+  L
Sbjct: 571 GIL-ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 253/548 (46%), Gaps = 7/548 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           Y+  +M V+ +      +  ++N   + G  E+A  +F  + E G+ P    Y  ++D+L
Sbjct: 108 YMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL 167

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E   +    +   M   G+  +V  Y  L+  L K    + A  +   +  +   P+ 
Sbjct: 168 FKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNC 227

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCE 190
           V+Y+ ++   CKLG V +   L            V VY+++++G  K+  + EA  ++ +
Sbjct: 228 VTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRK 287

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV R I PNV  Y T+I           +L +  +M  RG   N     S +      GR
Sbjct: 288 MVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGR 347

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L+  M+  G LP+ V Y++++ G    G   +A +++ +M E S   +V  Y+ 
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI+G  K G     S     M   G +P+   +  M+   C+      A  L+ +M    
Sbjct: 408 LINGLFKLGKYESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN++T N  ++ LC  G ++  M LL+ M      P  TT+  +LD   +  R     
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            +  ++   G++L++ TYNT++   CR GM+  A  +   M+ +G   D IT+N +I+ Y
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C    +  A  +  ++   G  +P++ +Y  LL G+  +  ++EA   + +M   G+ PN
Sbjct: 587 CISSHLKKAFAVHSQMLTEG-VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645

Query: 551 FATWNVLV 558
             T+++LV
Sbjct: 646 ATTYDILV 653



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 260/554 (46%), Gaps = 7/554 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + + ++M+  GV  +   + ++I+S  + G   +A  +  R+   G+   V +Y 
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L      +    ++  +  + + PN  TY+ L+   CK   V+    LL EM  K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
              P+ + Y++IV    K G + EA    R++  R     V VY  LI+G  K  +   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  EM  RG++ N     + +++L   G +E +  +   M  RG  P+  ++TS++ G
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G+  +A ++   M  +    +VVAY+ LI+GL   G   E+ S    M +    P+
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPD 435

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             T++ +I+ + K GNL  A ++ N M S G  PN +    +V+ LC      +   L+ 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M      P   T    +       R D  + + DQ+       +++TYN L+    R+ 
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLG 555

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            ++ A  +  ++   GI  +I+TYN ++HG C +  + +AF +  +ML EG   +  T+N
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           I++        +  A  L+++++  G   P+  +Y  L+ G    G M+E      +M+ 
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERG-LVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 545 EGICPNFATWNVLV 558
           +G  P   T+NVL+
Sbjct: 675 KGFVPKTRTYNVLI 688



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 209/399 (52%), Gaps = 1/399 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  +N LI+G C+  +I  A  LL  M   G  P+++TY+T+++  C +G++ T+  ++G
Sbjct: 17  VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           ++ +    PN+ ++T+L+  Y       +A  +++ M  +  +P+VV Y+ +++GLC +G
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            ++EA SV  +MEE    PN  +Y+ LID   K GN+  A  +  RM+  G   +VV YT
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  L +  M + A  + + +  E+  PN VT++  I G C  G V+    LL +M++ 
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+  Y+ ++DG  +   + EA +++ ++ +  I  N+  Y T++ G  +A     A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L  +M   G + +    +  +    + G++  A +L   +   G   PD ++YTS++ 
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL-PDRVNYTSMMD 375

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           G   +G   +AF   Q+M  +    +   +NVL+  LF 
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK 414



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/554 (23%), Positives = 250/554 (45%), Gaps = 54/554 (9%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ++  + LLQ+M+ + +  +  V+ S+++ Y + GL  +A+ +  ++ +  + P
Sbjct: 239 KLGD---VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILP 295

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V +Y  ++D     ++  +   ++  MK  G+E N F  +  +  L ++ R++ A +L 
Sbjct: 296 NVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR----------------------- 160
            +M ++G  PD V+YT+++    K G+  +A  +A                         
Sbjct: 356 KDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 161 -------FGSGV---------SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
                  F +G+         + +N +IN  CKE  +  A  LL EM   G+ PN IT +
Sbjct: 416 GKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++  LC  G +E ++ +L  M V G +P   +  ++L       R      + ++++  
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGM 535

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   ++  Y+TLI   C  G +  A  V   M       ++ TY+ALI G+  + +L  A
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             + ++M++ G SPNV  Y  ++  L    +  +A  L+ +M      PN  T++  + G
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
               G +   +KL  +M     +P   TYN L+    +  ++ +A EL+ E++  GI  N
Sbjct: 656 HGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPN 715

Query: 445 IVTYNTILHGVCRAGMVVE-------AFQLLGKMLIEGTKLDAI-----TFNIIIYAYCK 492
             TY+ ++ G  +     E       ++Q   K L E            T   I +   K
Sbjct: 716 SSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAK 775

Query: 493 QGKVNNAIQLLDRI 506
            GK  +A ++L+++
Sbjct: 776 PGKKADAQRILNKL 789



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 42/343 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++++L    EI+    LL  M V G   +     +V+++  +   A+  L M  ++   G
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMG 536

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  +  YN ++              ++ +M   G+  ++ TYN L+   C ++ +  A+
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  +M  +G +P+                              V  YN L+ GL     
Sbjct: 597 AVHSQMLTEGVSPN------------------------------VETYNILLGGLSAARL 626

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I+EA  L+ +M +RG+ PN  TY  ++S    +GN++  + +  +M  +G  P   ++  
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG---LCSNGSMDEAVSVSYQ-- 295
           L+  +  G +  +A +L   M   G  PN   Y  LI G   L     +++++  SYQ  
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE 746

Query: 296 -------MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
                  M E    P   T + +    AK G    A +I N++
Sbjct: 747 AKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 101/181 (55%), Gaps = 2/181 (1%)

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+  +  E   ++  +N L+DG  R   +  A EL+  ++  G   +IVTYNT+++G C+
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G +  A +L+G++ +   + + IT+  +I AYCK   + +A+ + D +       PD++
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKS-LVPDVV 123

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +YT ++ G+C SG ++EA    ++M   G+ PN  ++  L+ SLF   G++   ++L   
Sbjct: 124 TYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE-GNVAEAFVLQGR 182

Query: 578 M 578
           M
Sbjct: 183 M 183


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 260/508 (51%), Gaps = 11/508 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIY----SNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           P+ K   H+L   L     + I  I+    ++  R G + ++  ++ L+K+ C  NR D 
Sbjct: 111 PSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSI-VFDYLIKSCCDMNRADE 169

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALIN 173
           A++    M  KG  P   +  +++S   KL + E A         +R  S V  +N +IN
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
            LCKE K+++A   +  M   G+ PN++TY+TI+   C  G VE +  IL  M  +   P
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  ++ SL+ G    GR  EAS ++  M+++G  P+ V Y+TLI G C+ G++D A +  
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +    P ++TY++LI           A  +   +   G SP+ + Y  ++   C+ 
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L ++M      P   T+ + +  L    R+  A  L  ++     LP++  +
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMF 469

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+DG    + VK AFEL+ ++++  +  + VT+NTI+ G CR G V EA +L  +M  
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G K D I+FN +I  Y ++G + +A ++ + +   G +NP +++Y +L+ G+C +    
Sbjct: 530 RGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG-FNPTVLTYNALVQGLCKNQEGD 588

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            A   L++M+++G+ P+  T+  L+  +
Sbjct: 589 LAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 244/466 (52%), Gaps = 5/466 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I S   +  A++A + FY ++E G+ PT++  N +L   L  NR      +Y+ M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R  ++ +V+T+NI++  LCK  ++  A   +  M   G  P+ V+Y TIV   C  G+V
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E A  +       +       Y +LI+G+CK+ ++EEA  +  EMV +G+ P+ + Y+T+
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C+ GN++ +     +M  +G +P + ++ SL+    +  RT EA  +   +  +G 
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+ + Y+ LI+G C   +  +A  +  +M  +   P   TY++L+   +K   +  A  
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++ ++ S G  P+V+ +  ++   C N+    A  L++ M     PP+ VTFNT ++G C
Sbjct: 453 LFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+V+ A +L D+MK+    P+  ++N L+ G  R   +K+AF +  E+   G    ++
Sbjct: 513 REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           TYN ++ G+C+      A +LL +M+ +G   D  T+  +I    K
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 198/398 (49%), Gaps = 5/398 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  +IN   + G  ++A      +   G+KP +  YN I+    +  R    + I + M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           KR  +EP+ FTY  L+  +CK  R++ A K+  EM  KG  P AV Y T++   C  G +
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A       L       +S YN+LI+ L  E + +EA  ++ E+ ++GI P+ ITY+ +
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C   N + +  +  +M   G  P   ++TSLL       R  EA DL+ ++  EG 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+V+ ++ LI G CSN ++  A  +   M+    PP+  T++ ++ G  + G +  A +
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +++ M   G  P+ +++  ++    +      A  +  +M      P  +T+N  ++GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
                D A +LL +M      P+ TTY  L++G+ +VN
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 178/350 (50%), Gaps = 5/350 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++    +L  MK + +      + S+I+   + G  E+A K+F  + + GL+P+  IYN 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D    +    M +     M + G+ P + TYN L+ AL    R D A  ++ E+  KG
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
            +PDA++Y  +++  C+    ++A       LA         Y +L++ L K+++++EA 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  ++   G+ P+VI ++ +I   C   NV+ +  +L  M      P+  +F ++++G+
Sbjct: 452 DLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+  EA +L++ M R G  P+ ++++TLI G    G + +A  V  +M +    P V
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            TY+AL+ G  K      A ++   M+S G +P+   Y  +++ + + N+
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 5/322 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  + ++  ++    + ++M  +G+  S  ++ ++I+ +   G  + A      + + G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PT+  YN ++ AL  E R      +   ++  G+ P+  TYNIL+   C+      A+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L  EM   G  P   +YT+++  + K  +++EA +L  +  S      V ++NALI+G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGH 476

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    ++ AF LL +M    + P+ +T++TI+   C  G VE +  +  +M  RG  P+ 
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            SF +L+ GY   G   +A  + N M+  GF P V+ Y+ L+ GLC N   D A  +  +
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 296 MEENSCPPNVTTYSALIDGFAK 317
           M      P+ TTY  LI+G AK
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAK 618



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 172/397 (43%), Gaps = 36/397 (9%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I E F  L    DR    + I +  +I S CD+   + +      M  +G  P I +  S
Sbjct: 132 IREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL  +L   RT  A  L+  M R     +V  ++ +I+ LC  G +              
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL-------------- 237

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
                           KA + +G       M ++G  PN+V Y  +V   C +     A 
Sbjct: 238 ---------------KKAKDFVG------HMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +++  M  +   P++ T+ + I G+C  GR++ A K+ ++M Q    P+   YN L+DG 
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                +  A     E+ K GI   + TYN+++H +       EA  ++ ++  +G   DA
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+NI+I  YC+      A  L D +   G   P   +YTSLL  +     M+EA    +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASG-IKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           K+ +EG+ P+   +N L+    SN    G   +L D+
Sbjct: 456 KITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDM 492



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 30/288 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +   D  + ++++++ +G+S     +  +IN Y R   A++A  +   +   G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KPT K Y  +L  L  +NR    + ++  +  +G+ P+V  +N L+   C N+ V GA+
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAF 486

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +LL +M      PD V++ TI                              + G C+E K
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTI------------------------------MQGHCREGK 516

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +EEA  L  EM  RGI P+ I+++T+IS     G+++ +  +  +M   G NP + ++ +
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           L++G         A +L   M+ +G  P+   Y TLI G+      DE
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 271/533 (50%), Gaps = 7/533 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
           VF          GL  +A K F ++  +G+  +    N  L  L ++ +   M+  ++S 
Sbjct: 41  VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
             + G+  N  +YNIL+ +L +  ++  A+ LL+ M  KGC PD VSYTTI+   C +G+
Sbjct: 101 FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGE 160

Query: 151 VEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++     +E+ ++     +  Y+++I  LCK  K+ E   +L EM+ RG+ P+ + Y+T
Sbjct: 161 LQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTT 220

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C +GN + +  +  +M  R   P+  +F++L+ G    G+  EA  L+N MI++G
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           F P+ V Y+ LI G C  G M +A  +  QM +    PNV TY+AL DG  K+G L  A+
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ + M   G   N+  Y  +V  LC+     QA  L+E+M      P+T+T+ T +   
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G +  A +LL +M      P + T+N L++GL    ++++   L+  + + GI  N 
Sbjct: 401 YKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNA 460

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TYN+I+   C    +  + ++   M  +G   D+ T+NI+I  +CK   +  A   L +
Sbjct: 461 ATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA-WFLHK 519

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
                 +N    SY +L+ G      + EA    ++M  EG+  +   +N+ V
Sbjct: 520 EMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 267/519 (51%), Gaps = 9/519 (1%)

Query: 51  KMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKAL 110
           ++ Y  +++G  P V  ++     L+     +     +  +   G+  +  + N+ L  L
Sbjct: 27  RLIYTYKDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCL 84

Query: 111 C-KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SG 164
             K + +    K+  E    G   +  SY  +++S+ +LG++ EA  L MR         
Sbjct: 85  SSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPD 144

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  Y  +I+G C   ++++   L+ EM  +G+ PN+ TYS+II  LC  G V     +L 
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RG  P+   +T+L+ G+   G T  A  L++ M     +P+ +A+S LI GL  +G
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            + EA  +  +M +    P+  TY+ALIDG+ K G +  A  + N+M+  G +PNVV YT
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            +   LC++     A+ L+ +M  +    N  T+NT + GLC  G +  A+KL+++MK+ 
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              P+  TY  L+D   +   + +A EL+ E+   G+Q  +VT+N +++G+C +G + + 
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDG 444

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +LL  ML +G   +A T+N I+  YC +  +  + ++   +   G   PD  +Y  L+ 
Sbjct: 445 ERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV-PDSNTYNILIK 503

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           G C +  M+EA+   ++M+ +      +++N L++  F 
Sbjct: 504 GHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFK 542



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 239/474 (50%), Gaps = 5/474 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++NS  R+G   +A  +  R+   G  P V  Y  I+D          +  +   M+  G
Sbjct: 116 LMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG 175

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++PN++TY+ ++  LCK+ +V    K+L EM  +G  PD V YTT++   CKLG  + A 
Sbjct: 176 LKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAY 235

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L     A         ++ALI GL    K+ EA  L  EM+ +G +P+ +TY+ +I   
Sbjct: 236 KLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGY 295

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C +G ++ +  +  QM   G  PN+ ++T+L  G    G    A++L + M R+G   N+
Sbjct: 296 CKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNI 355

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+T+++GLC  G++ +AV +  +M+E    P+  TY+ L+D + K G ++ A ++   
Sbjct: 356 STYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLRE 415

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+  G  P VV +  ++  LC +        L++ M  +   PN  T+N+ +K  C    
Sbjct: 416 MLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNN 475

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  + ++   M     +P+  TYN L+ G  +   +KEA+ L  E+ +    L   +YN 
Sbjct: 476 MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNA 535

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           ++ G  +   ++EA QL  +M  EG    A  +N+ +    ++G +   ++L D
Sbjct: 536 LIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCD 589



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/511 (28%), Positives = 262/511 (51%), Gaps = 24/511 (4%)

Query: 58  EFGLKPTVKIYN---HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN 114
           +F  KP + I N   H ++ L           IY+  K  G +P+VF  ++  + L +  
Sbjct: 8   DFWAKPNLDISNSFTHFVERL-----------IYT-YKDWGSDPHVF--DVFFQVLVEAG 53

Query: 115 RVDGAYKLLVEMGNKGCAPDAVS---YTTIVSSICK-LGQVEEARELAMRFGS--GVSVY 168
            ++ A K   ++ N G A  A S   Y T +SS    LG V +      + G       Y
Sbjct: 54  LLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESY 113

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+N L +  KI EA  LL  M  +G  P+V++Y+TII   C VG ++  + ++ +M +
Sbjct: 114 NILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQL 173

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +G  PN+++++S++      G+  E   +   M++ G  P+ V Y+TLI G C  G+   
Sbjct: 174 KGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQA 233

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +  +ME     P+   +SALI G + +G ++ A +++N MI  G  P+ V YT ++ 
Sbjct: 234 AYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALID 293

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C+     +A  L  +M      PN VT+     GLC  G +D A +LL +M +     
Sbjct: 294 GYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQL 353

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           NI+TYN +++GL +   + +A +L+ E+++ G+  + +TY T++    + G +V+A +LL
Sbjct: 354 NISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELL 413

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            +ML  G +   +TFN+++   C  GK+ +  +LL  +   G   P+  +Y S++   C 
Sbjct: 414 REMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG-IMPNAATYNSIMKQYCI 472

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              M+ +    + M  +G+ P+  T+N+L++
Sbjct: 473 RNNMRISTEIYRGMCAQGVVPDSNTYNILIK 503



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 212/445 (47%), Gaps = 5/445 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I    +LL +M+ +G       + ++I+ Y  VG  ++ +++   ++  GLKP +  Y+
Sbjct: 125 KIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYS 184

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+  L    +      +   M + G+ P+   Y  L+   CK      AYKL  EM  +
Sbjct: 185 SIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR 244

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
              PD+++++ ++  +   G+V EA +L        F      Y ALI+G CK  ++++A
Sbjct: 245 EIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKA 304

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F+L  +MV  G+ PNV+TY+ +   LC  G ++T+  +L +M  +G   NI ++ +++ G
Sbjct: 305 FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNG 364

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   +A  L   M   G  P+ + Y+TL+      G M +A  +  +M +    P 
Sbjct: 365 LCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPT 424

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V T++ L++G   +G L    ++   M+  G  PN   Y  ++K  C  N    +  +  
Sbjct: 425 VVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYR 484

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  +   P++ T+N  IKG C    +  A  L  +M +       ++YN L+ G  +  
Sbjct: 485 GMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRK 544

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYN 449
           ++ EA +L  E+ + G+  +   YN
Sbjct: 545 KLLEARQLFEEMRREGLVASAEIYN 569



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 219/436 (50%), Gaps = 6/436 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+  V  L+++M+++G+  +   + S+I    + G   +  K+   + + G+ P   IY 
Sbjct: 160 ELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYT 219

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D             ++S M+   + P+   ++ L+  L  + +V  A KL  EM  K
Sbjct: 220 TLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKK 279

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD V+YT ++   CKLG++++A     + + +     V  Y AL +GLCK  +++ A
Sbjct: 280 GFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTA 339

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM  +G+  N+ TY+TI++ LC  GN+  ++ ++ +M   G +P+  ++T+L+  
Sbjct: 340 NELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDA 399

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +A +L   M+  G  P VV ++ L++GLC +G +++   +   M E    PN
Sbjct: 400 YYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPN 459

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY++++  +    N+  +++I+  M + G  P+   Y  ++K  C+     +A  L +
Sbjct: 460 AATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHK 519

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +       ++N  IKG     ++  A +L ++M++   + +   YN  +D      
Sbjct: 520 EMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEG 579

Query: 425 RVKEAFELVTE-IEKC 439
            ++   EL  E IEKC
Sbjct: 580 NMETTLELCDEAIEKC 595


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 239/455 (52%), Gaps = 4/455 (0%)

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS-GVS 166
           CK+ + D +   L  M N+G  PD +  T ++     + ++E+A    E+  + G   V 
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGKPDVF 147

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNA+I+G CK  +++ A  +L  M  RG +P+V+TY+ +I + C  G ++ +L ++ Q+
Sbjct: 148 AYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQL 207

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
               C P + ++T L++  +  G   EA  L + M+  G  P+   Y+ +++G+C  G +
Sbjct: 208 LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGML 267

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A     ++ +N C   V+TY+ L+      G      ++ + M+  GC PN + Y+ +
Sbjct: 268 DRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTL 327

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC++    +A ++++ M  +   P+  +++  I  LC  G+VD A++ LD M     
Sbjct: 328 ITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGH 387

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           LP+I +YN +L  L +     EA  +  ++ + G   N  +YNT+   +  +G  + A  
Sbjct: 388 LPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALG 447

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           ++ +ML  G   D IT+N +I   C+ G V+ AI+LL  +    +  P +ISY ++L G+
Sbjct: 448 MILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGL 507

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C    + +A   L  M+NEG  PN  T+ +L++ +
Sbjct: 508 CKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 212/392 (54%), Gaps = 6/392 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +VI+ + +    + A K+  R+++ G +P V  YN ++       R  +   +   + +D
Sbjct: 151 AVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKD 210

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             +P V TY IL++A      +D A KLL EM ++G  PD  +Y  +V+ +CK G ++ A
Sbjct: 211 NCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRA 270

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E   R       +GVS YN L+  L  E K E    L+ +M+ +G +PN ITYST+I++
Sbjct: 271 FEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITA 330

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G ++ +  +L  M  +   P+ +S+  L+      G+   A +  + MI  G LP+
Sbjct: 331 LCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPD 390

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +++Y++++  LC NG+ DEA+++  ++ E  CPPN  +Y+ L      +G+ + A  +  
Sbjct: 391 ILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMIL 450

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQA-HSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            M+SNG  P+ + Y  ++  LC++ +  QA   L++    E C P  +++NT + GLC  
Sbjct: 451 EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKV 510

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            R+  A+++L  M    CLPN TTY  L+ G+
Sbjct: 511 QRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 241/478 (50%), Gaps = 11/478 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F+  +N   +    +++L     +   G KP V +   ++       +      +   ++
Sbjct: 80  FMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILE 139

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+VF YN ++   CK +RVD A K+L  M  +G  PD V+Y  ++ + C  G+++
Sbjct: 140 KHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLD 198

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  +  +         V  Y  LI     +  I+EA  LL EM+ RG+ P+  TY+ ++
Sbjct: 199 LALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVV 258

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           + +C  G ++ +   L ++   GC   + ++  LL+  L  G+      L + M+ +G  
Sbjct: 259 NGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCE 318

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN + YSTLI  LC +G +DEA +V   M+E +  P+  +Y  LI    + G +  A + 
Sbjct: 319 PNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEF 378

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            + MIS G  P++++Y  ++  LC+N    +A ++ EK+    CPPN  ++NT    L  
Sbjct: 379 LDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWS 438

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI---EKCGIQLN 444
            G    A+ ++ +M      P+  TYN L+  L R   V +A EL+ ++   EKC  Q  
Sbjct: 439 SGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKC--QPT 496

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +++YNT+L G+C+   +++A ++L  M+ EG   +  T+ ++I      G   +A++L
Sbjct: 497 VISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 202/388 (52%), Gaps = 2/388 (0%)

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           D+  D     +   ++  C     + SL  L  M  RG  P++   T L+KG+    +  
Sbjct: 70  DQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIE 129

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  +   + + G  P+V AY+ +I G C    +D A  V  +M++    P+V TY+ LI
Sbjct: 130 KAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILI 188

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             F   G L  A ++ ++++ + C P V+ YT +++         +A  L+++M      
Sbjct: 189 GNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLR 248

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+  T+N  + G+C  G +D A + L ++ +  C+  ++TYN LL  LL   + +   +L
Sbjct: 249 PDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKL 308

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           ++++   G + N +TY+T++  +CR G + EA  +L  M  +    D  +++ +I A C+
Sbjct: 309 MSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCR 368

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +GKV+ AI+ LD +  GG   PDI+SY S+L  +C +G   EA    +K+   G  PN  
Sbjct: 369 EGKVDLAIEFLDDMISGGHL-PDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAG 427

Query: 553 TWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           ++N L  +L+S+   +  + ++ ++++N
Sbjct: 428 SYNTLFGALWSSGDKIRALGMILEMLSN 455



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 167/339 (49%), Gaps = 31/339 (9%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    LL +M   G+      +  V+N   + G+ ++A +   RI + G    V  YN 
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  LL E ++     + S+M   G EPN  TY+ L+ ALC++ ++D A  +L  M  K 
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            APD  SY  ++S++C+ G+V    +LA+ F                          L +
Sbjct: 352 LAPDGYSYDPLISALCREGKV----DLAIEF--------------------------LDD 381

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+  G  P++++Y++I++SLC  GN + +L I  ++   GC PN  S+ +L       G 
Sbjct: 382 MISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGD 441

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYS 309
              A  +   M+  G  P+ + Y++LI  LC +G +D+A+ +   M E   C P V +Y+
Sbjct: 442 KIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYN 501

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
            ++ G  K   ++ A ++   M++ GC PN   YT +++
Sbjct: 502 TVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQ 540



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 41/237 (17%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           + L+  M V+G   +   + ++I +  R G  ++A  +   ++E  L P    Y+ ++ A
Sbjct: 306 EKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISA 365

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP- 133
           L  E +  +      +M   G  P++ +YN +L +LCKN   D A  +  ++G  GC P 
Sbjct: 366 LCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPN 425

Query: 134 ----------------------------------DAVSYTTIVSSICKLGQVEEAREL-- 157
                                             D ++Y +++S +C+ G V++A EL  
Sbjct: 426 AGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLV 485

Query: 158 ----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
               + +    V  YN ++ GLCK  +I +A  +L  MV+ G  PN  TY+ +I  +
Sbjct: 486 DMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/556 (28%), Positives = 271/556 (48%), Gaps = 7/556 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF ++ +    +G+ E A + F R+ +F + P  +  N  L  L       +    + +
Sbjct: 63  GVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRD 122

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P VFTYNI++  +CK   +  A  L  +M   G  PD V+Y T++    K+G 
Sbjct: 123 MVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGL 182

Query: 151 VEEAREL--AMRF---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++E+  L   M+F      V  YNALIN  CK   +  AF    EM D+ + PNVI+YST
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I +LC  G ++ ++     M   G  PN  +++SL+      G   EA  L + M++E 
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              N+V Y+TL+ GLC  G M+EA  +   M +    PN+  Y+ALI G  K  ++  A 
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +++N M      P+++ +  +V  LC  +   +   ++ +M       N V + T +   
Sbjct: 363 ELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAY 422

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G    A+ LL++M+       + T+  L+DGL +   V+EA      +    +Q N+
Sbjct: 423 FKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNV 482

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             Y  ++ G+C+   + +A +L  +M  +    D I +  +I    K G    A+ + ++
Sbjct: 483 AVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNK 542

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           +   G    D+ +YTSL+WG+   G +Q+A  +L +M+ +GI P+      L+R  +  L
Sbjct: 543 MMEMG-IELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYE-L 600

Query: 566 GHLGPVYILDDIMANK 581
           G++     L + +  K
Sbjct: 601 GNIDEAIELQNELVEK 616



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 259/518 (50%), Gaps = 13/518 (2%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           + +L +  E D  +   + M   G++ +   +  +I    + G    A  +F ++++ GL
Sbjct: 104 LHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGL 163

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P +  YN ++D             ++  MK  G EP+V TYN L+ + CK   +  A++
Sbjct: 164 TPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFE 223

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS---------VYNALI 172
              EM +K   P+ +SY+T++ ++CK G ++    +A++F   ++          Y++LI
Sbjct: 224 FFREMKDKDLKPNVISYSTLIDALCKEGMMQ----MAIKFFVDMTRVGLLPNEFTYSSLI 279

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +  CK   + EAF L  EM+   +D N++TY+T++  LC+ G +  +  +   M   G  
Sbjct: 280 DANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVT 339

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN+ ++T+L+ G++      +A +L+N M  +   P+++ + T++ GLCS   ++E   +
Sbjct: 340 PNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKII 399

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M+E+    N   Y+ L+D + KAGN   A  +   M   G    VV +  ++  LC+
Sbjct: 400 MTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCK 459

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             +  +A     +M   +  PN   +   I GLC    +  A KL D+M+    +P+   
Sbjct: 460 RGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIA 519

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  ++DG L+    +EA  +  ++ + GI+L++  Y +++ G+ + G V +A + L +M+
Sbjct: 520 YTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMI 579

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            +G   D      ++  + + G ++ AI+L + +   G
Sbjct: 580 GKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 232/475 (48%), Gaps = 9/475 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P    ++ L   L +   ++ A +  + M      P A S    +  + K G+ + +R+ 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 158 AMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                G+G++     YN +I  +CKE  +  A  L  +M   G+ P+++TY+T+I     
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G ++ S+ +  +M   GC P++ ++ +L+  +        A + +  M  +   PNV++
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTLI  LC  G M  A+     M      PN  TYS+LID   KAGNL  A  + + M+
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                 N+V YT ++  LC+  M ++A  L   M      PN   +   I G      +D
Sbjct: 300 QEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMD 359

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            AM+L ++M++ +  P+I  +  ++ GL   ++++E   ++TE+++ GI  N V Y T++
Sbjct: 360 KAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLM 419

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
               +AG   EA  LL +M   GT++  +TF  +I   CK+G V  AI    R+    + 
Sbjct: 420 DAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRM-PDHDL 478

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            P++  YT+L+ G+C +  + +A     +M ++ + P+   +  ++     NL H
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMID---GNLKH 530



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 219/446 (49%), Gaps = 5/446 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+   +D    L ++MK  G       + ++INS+ +     +A + F  +++  
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y+ ++DAL  E    M    + +M R G+ PN FTY+ L+ A CK   +  A+
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAF 292

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
            L  EM  +    + V+YTT++  +C+ G + EA EL    G +GV+     Y ALI+G 
Sbjct: 293 MLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGH 352

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   +++A  L  EM ++ I P+++ + TI+  LC    +E    I+ +M   G   N 
Sbjct: 353 IKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANP 412

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+L+  Y   G   EA +L   M   G    VV +  LI GLC  G + EA+    +
Sbjct: 413 VIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGR 472

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M ++   PNV  Y+ALIDG  K   +  A ++++ M      P+ +AYT M+    ++  
Sbjct: 473 MPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGN 532

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A ++  KM       +   + + + GL  CG+V  A K L +M     +P+ T    
Sbjct: 533 FQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTR 592

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGI 441
           LL     +  + EA EL  E+ + G+
Sbjct: 593 LLRKHYELGNIDEAIELQNELVEKGL 618



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 1/333 (0%)

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C P    F +L    +  G    A   + RM +   LP   + +  +H L   G  D + 
Sbjct: 58  CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSR 117

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
                M      P V TY+ +I    K G++L A  ++ +M   G +P++V Y  ++   
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +  +  ++  L E+M F  C P+ +T+N  I   C    +  A +   +MK  +  PN+
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            +Y+ L+D L +   ++ A +   ++ + G+  N  TY++++   C+AG + EAF L  +
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           ML E   L+ +T+  ++   C++G +N A +L  R  G     P++ +YT+L+ G     
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF-RAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            M +A     +M  + I P+   W  +V  L S
Sbjct: 357 SMDKAMELFNEMREKDIKPDILLWGTIVWGLCS 389



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 2/245 (0%)

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           N C P    +  +  VL +  M   A     +M      P   + N F+  L   G  D 
Sbjct: 56  NVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDL 115

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           +      M      P + TYN ++  + +   +  A  L  +++K G+  +IVTYNT++ 
Sbjct: 116 SRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLID 175

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G  + G++ E+  L  +M   G + D IT+N +I ++CK   +  A +    ++   +  
Sbjct: 176 GYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMK-DKDLK 234

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           P++ISY++L+  +C  G MQ A  +   M   G+ PN  T++ L+ +     G+LG  ++
Sbjct: 235 PNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA-NCKAGNLGEAFM 293

Query: 574 LDDIM 578
           L D M
Sbjct: 294 LADEM 298



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 35/261 (13%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E+C+I     ++ +MK  G+  +  ++ +++++Y + G   +A+ +   +R+ G + TV 
Sbjct: 394 EECKI-----IMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +  ++D L            +  M    ++PNV  Y  L+  LCKNN +  A KL  EM
Sbjct: 449 TFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEM 508

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            +K   PD ++YT                              A+I+G  K    +EA  
Sbjct: 509 QDKNMIPDKIAYT------------------------------AMIDGNLKHGNFQEALN 538

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +  +M++ GI+ ++  Y++++  L   G V+ +   L +M  +G  P+    T LL+ + 
Sbjct: 539 MRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHY 598

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             G   EA +L N ++ +G +
Sbjct: 599 ELGNIDEAIELQNELVEKGLI 619


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 167/647 (25%), Positives = 296/647 (45%), Gaps = 81/647 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-F 59
           ++ +L +   +  V  +++ +K +   C+E V ++V+ +Y +  +  +AL  F ++ E F
Sbjct: 49  ILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIF 108

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G KP ++ YN +L+A +  N         +  +  G+ PN+ TYNIL+K   K  +   A
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA------------------------- 154
             LL  M +K   PD  SY T+++ + K G +  A                         
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 155 ----------RELAMRFGSG------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
                     +E+  R   G      V  YN +INGLCK  + +E+  +   M     + 
Sbjct: 229 FFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEM 288

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           ++ TYS++I  LCDVGNV+ ++ +  +M  R    ++ ++ +LL G+   G+  E+ +LW
Sbjct: 289 DLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M +E    NVV+Y+  I GL  N  ++EA+SV   +       + TTY  LI G  K 
Sbjct: 349 VMMGKEN-CHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+L  A +I       G   +  AY+ +V  L +     +A  ++ +M    C  +    
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVC 467

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G     +++ A+    +M+   C P + +YN L++GL +  R  +A+  V E+ +
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
              + +++TY+ ++ G+C+   +  A  L  ++L++G + D    NI+++  C  GK+ +
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIED 587

Query: 499 AI-------------------QLLDRIRGGGE---------------WNPDIISYTSLLW 524
           A+                    L+D +    E               + PDIISY   L 
Sbjct: 588 ALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLK 647

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           G+C+ G + +        L  GI P   TW +LVR++      LGP+
Sbjct: 648 GLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLK----LGPL 690



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 77/152 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  +ID    L +Q+ V+G+     +   +++     G  E AL ++  +++  
Sbjct: 540 LMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSN 599

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +N ++D L       M + I++ M ++G +P++ +YNI LK LC   R+    
Sbjct: 600 CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGI 659

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
            L  +    G  P ++++  +V ++ KLG ++
Sbjct: 660 ALFDDALKNGILPTSITWYILVRAVLKLGPLD 691


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 272/533 (51%), Gaps = 6/533 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  +      P++  ++    A+    +F+++      ++ +G+  N++T NI+
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           +   C+  +   AY +L ++   G  PD  ++ T++  +   G+V EA  L  R      
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN+++NG+C+      A  LL +M +R +  +V TYSTII SLC  G ++ ++ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G   ++ ++ SL++G    G+ ++ + L   M+    +PNV+ ++ L+    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  +  +M      PN+ TY+ L+DG+     L  A+ + + M+ N CSP++V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +T ++K  C          +   ++      N VT++  ++G C  G++  A +L  +M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             +  LP++ TY  LLDGL    ++++A E+  +++K  + L IV Y TI+ G+C+ G V
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A+ L   +  +G K + +T+ ++I   CK+G ++ A  LL ++   G   P+  +Y +
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNT 548

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           L+      G +  +   +++M + G   + ++  +++  L S +  L   Y L
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 601



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 244/474 (51%), Gaps = 5/474 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +Q+++ G++ +      +IN + R      A  +  ++ + G +P    +N ++  L  E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            + S    +   M  +G +P+V TYN ++  +C++     A  LL +M  +    D  +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 139 TTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +TI+ S+C+ G ++ A    +E+  +   S V  YN+L+ GLCK  K  +   LL +MV 
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I PNVIT++ ++      G ++ +  +  +M  RG +PNI ++ +L+ GY +  R  E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+++ + M+R    P++V +++LI G C    +D+ + V   + +     N  TYS L+ 
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF ++G +  A +++  M+S+G  P+V+ Y  ++  LC N    +A  + E +       
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
             V + T I+G+C  G+V+ A  L   +      PN+ TY  ++ GL +   + EA  L+
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            ++E+ G   N  TYNT++    R G +  + +L+ +M   G   DA +  ++I
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 208/402 (51%), Gaps = 1/402 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  EM+     P+++ +S   S++         L    Q+ + G   NI++  
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +T  A  +  ++++ G+ P+   ++TLI GL   G + EAV +  +M EN
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C P+V TY+++++G  ++G+   A  +  +M       +V  Y+ ++  LC++     A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL ++M  +    + VT+N+ ++GLC  G+ +    LL  M   E +PN+ T+N LLD 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            ++  +++EA EL  E+   GI  NI+TYNT++ G C    + EA  +L  M+      D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TF  +I  YC   +V++ +++   I   G    + ++Y+ L+ G C SG ++ A    
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRG-LVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           Q+M++ G+ P+  T+ +L+  L  N      + I +D+  +K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 211/410 (51%), Gaps = 5/410 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G       + S++N   R G    AL +  ++ E  +K  V  Y+ I+D+L 
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++  M+  G++ +V TYN L++ LCK  + +    LL +M ++   P+ +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++    K G+++EA EL       G+S     YN L++G C ++++ EA  +L  M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V     P+++T++++I   C V  V+  + +   +  RG   N  +++ L++G+   G+ 
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+  M+  G LP+V+ Y  L+ GLC NG +++A+ +   ++++     +  Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  K G +  A  ++  +   G  PNV+ YT M+  LC+     +A+ L+ KM  +  
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            PN  T+NT I+     G +  + KL+++MK      + ++   ++D LL
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 177/376 (47%), Gaps = 8/376 (2%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS-------FTSLLK 243
           M+ R I  N+     I   L   G++ T L      F   C  +  S       F   L+
Sbjct: 2   MIKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLR 61

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
             ++  +  +A  L+  MIR   LP++V +S     +      +  +    Q+E N    
Sbjct: 62  SGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N+ T + +I+ F +      A  +  +++  G  P+   +  ++K L       +A  L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M    C P+ VT+N+ + G+C  G    A+ LL +M++     ++ TY+ ++D L R 
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +  A  L  E+E  GI+ ++VTYN+++ G+C+AG   +   LL  M+      + ITF
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N+++  + K+GK+  A +L   +   G  +P+II+Y +L+ G C    + EA   L  M+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 544 NEGICPNFATWNVLVR 559
                P+  T+  L++
Sbjct: 361 RNKCSPDIVTFTSLIK 376



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 91/206 (44%), Gaps = 5/206 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    + + +   G+  +   +  ++  + + G  + A ++F  +   G+ P V  Y 
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD L    +      I+ ++++  M+  +  Y  +++ +CK  +V+ A+ L   +  K
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  P+ ++YT ++S +CK G + EA  L  +            YN LI    ++  +  +
Sbjct: 503 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTAS 562

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSL 210
             L+ EM   G   +  +   +I  L
Sbjct: 563 AKLIEEMKSCGFSADASSIKMVIDML 588


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 256/504 (50%), Gaps = 9/504 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ +V+ +N ++D        S    +   MK +G  P++ TYN L+   CK   +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           KL+ E+      P+ ++YTT++ + CK   +E+A     E+ ++     V  Y  ++NGL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+EEA  +  EM + G+ PN  +Y+T+I SL   GNV  +  + G+M VRG   ++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+L+ G    G  + A D++  ++ E  +PN V YS LI G C  G +++   +  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           MEE    PNV  YS+++DG+ K G L  A  +  +M+     PNV  Y  ++    + + 
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M       N    ++F+  L   GR++ A +L   M     LP+   Y  
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV-VEAFQLLGKMLIE 474
           ++DG  +  +  +AF +  E+ +     ++V YN +++G+ + G    E+F    + L  
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL-- 430

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D+ TFN +I AYCK+G + NA++LL+ ++  G   P+ I+   L+  +C +G +++
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG-LKPNSITCNILVQRLCAAGEIEK 489

Query: 535 AFIYLQKMLNEGICPNFATWNVLV 558
               L  ML  G  P   T   ++
Sbjct: 490 TMDLLNDMLVMGFHPTPTTHKAVL 513



 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 166/592 (28%), Positives = 271/592 (45%), Gaps = 42/592 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI     LL+ MK EG +     + +++N + ++G    A K+   I    L+P V  Y 
Sbjct: 32  EISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYT 91

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA            +Y  M    + P+V TY  ++  LCK+ +V+ A  +  EM   
Sbjct: 92  TLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEV 151

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  P+  SY T++ S+ K G V EA  L  R      G  V VY AL++GL K      A
Sbjct: 152 GVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNA 211

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +   +++  + PN +TYS +I   C +G+V     +L +M  +   PN+  ++S++ G
Sbjct: 212 EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDG 271

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG------------------------- 279
           Y   G  +EA D+  +M++   LPNV  Y TLI G                         
Sbjct: 272 YTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEEN 331

Query: 280 ----------LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
                     L  +G M+EA  +   M      P+   Y++++DGF KAG    A  I  
Sbjct: 332 NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQ 391

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M       +VVAY  ++  L +   + ++ S    M      P++ TFNT I   C  G
Sbjct: 392 EMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEG 450

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A+KLL++MK Y   PN  T N L+  L     +++  +L+ ++   G      T+ 
Sbjct: 451 NLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHK 510

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +L    ++        +  +++  G KLD  T+N +I  +C+ G +  A  +   + G 
Sbjct: 511 AVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK 570

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G    DII+Y +L+ G C S  +++AF    +ML EG+ PN  T+N+L+  L
Sbjct: 571 GIL-ADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGL 621



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 141/548 (25%), Positives = 253/548 (46%), Gaps = 7/548 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           Y+  +M V+ +      +  ++N   + G  E+A  +F  + E G+ P    Y  ++D+L
Sbjct: 108 YMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSL 167

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E   +    +   M   G+  +V  Y  L+  L K    + A  +   +  +   P+ 
Sbjct: 168 FKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNC 227

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCE 190
           V+Y+ ++   CKLG V +   L            V VY+++++G  K+  + EA  ++ +
Sbjct: 228 VTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRK 287

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV R I PNV  Y T+I           +L +  +M  RG   N     S +      GR
Sbjct: 288 MVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGR 347

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L+  M+  G LP+ V Y++++ G    G   +A +++ +M E S   +V  Y+ 
Sbjct: 348 MEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNV 407

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI+G  K G     S     M   G +P+   +  M+   C+      A  L+ +M    
Sbjct: 408 LINGLFKLGKYESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYG 466

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN++T N  ++ LC  G ++  M LL+ M      P  TT+  +LD   +  R     
Sbjct: 467 LKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVIL 526

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            +  ++   G++L++ TYNT++   CR GM+  A  +   M+ +G   D IT+N +I+ Y
Sbjct: 527 HMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGY 586

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C    +  A  +  ++   G  +P++ +Y  LL G+  +  ++EA   + +M   G+ PN
Sbjct: 587 CISSHLKKAFAVHSQMLTEG-VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPN 645

Query: 551 FATWNVLV 558
             T+++LV
Sbjct: 646 ATTYDILV 653



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 260/554 (46%), Gaps = 7/554 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + + ++M+  GV  +   + ++I+S  + G   +A  +  R+   G+   V +Y 
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L      +    ++  +  + + PN  TY+ L+   CK   V+    LL EM  K
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
              P+ + Y++IV    K G + EA    R++  R     V VY  LI+G  K  +   A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  EM  RG++ N     + +++L   G +E +  +   M  RG  P+  ++TS++ G
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDG 376

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G+  +A ++   M  +    +VVAY+ LI+GL   G   E+ S    M +    P+
Sbjct: 377 FFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPD 435

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             T++ +I+ + K GNL  A ++ N M S G  PN +    +V+ LC      +   L+ 
Sbjct: 436 SATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLN 495

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M      P   T    +       R D  + + DQ+       +++TYN L+    R+ 
Sbjct: 496 DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLG 555

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            ++ A  +  ++   GI  +I+TYN ++HG C +  + +AF +  +ML EG   +  T+N
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           I++        +  A  L+++++  G   P+  +Y  L+ G    G M+E      +M+ 
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERG-LVPNATTYDILVSGHGKIGNMKECVKLYCEMIT 674

Query: 545 EGICPNFATWNVLV 558
           +G  P   T+NVL+
Sbjct: 675 KGFVPKTRTYNVLI 688



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 209/399 (52%), Gaps = 1/399 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  +N LI+G C+  +I  A  LL  M   G  P+++TY+T+++  C +G++ T+  ++G
Sbjct: 17  VEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMG 76

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           ++ +    PN+ ++T+L+  Y       +A  +++ M  +  +P+VV Y+ +++GLC +G
Sbjct: 77  EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSG 136

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            ++EA SV  +MEE    PN  +Y+ LID   K GN+  A  +  RM+  G   +VV YT
Sbjct: 137 KVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYT 196

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  L +  M + A  + + +  E+  PN VT++  I G C  G V+    LL +M++ 
Sbjct: 197 ALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK 256

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+  Y+ ++DG  +   + EA +++ ++ +  I  N+  Y T++ G  +A     A
Sbjct: 257 HIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIA 316

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L  +M   G + +    +  +    + G++  A +L   +   G   PD ++YTS++ 
Sbjct: 317 LDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLL-PDRVNYTSMMD 375

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           G   +G   +AF   Q+M  +    +   +NVL+  LF 
Sbjct: 376 GFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFK 414



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/554 (23%), Positives = 250/554 (45%), Gaps = 54/554 (9%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ++  + LLQ+M+ + +  +  V+ S+++ Y + GL  +A+ +  ++ +  + P
Sbjct: 239 KLGD---VNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILP 295

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V +Y  ++D     ++  +   ++  MK  G+E N F  +  +  L ++ R++ A +L 
Sbjct: 296 NVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR----------------------- 160
            +M ++G  PD V+YT+++    K G+  +A  +A                         
Sbjct: 356 KDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKL 415

Query: 161 -------FGSGV---------SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
                  F +G+         + +N +IN  CKE  +  A  LL EM   G+ PN IT +
Sbjct: 416 GKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCN 475

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++  LC  G +E ++ +L  M V G +P   +  ++L       R      + ++++  
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGM 535

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   ++  Y+TLI   C  G +  A  V   M       ++ TY+ALI G+  + +L  A
Sbjct: 536 GVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKA 595

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             + ++M++ G SPNV  Y  ++  L    +  +A  L+ +M      PN  T++  + G
Sbjct: 596 FAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSG 655

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
               G +   +KL  +M     +P   TYN L+    +  ++ +A EL+ E++  GI  N
Sbjct: 656 HGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPN 715

Query: 445 IVTYNTILHGVCRAGMVVE-------AFQLLGKMLIEGTKLDAI-----TFNIIIYAYCK 492
             TY+ ++ G  +     E       ++Q   K L E            T   I +   K
Sbjct: 716 SSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAK 775

Query: 493 QGKVNNAIQLLDRI 506
            GK  +A ++L+++
Sbjct: 776 PGKKADAQRILNKL 789



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 142/343 (41%), Gaps = 42/343 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++++L    EI+    LL  M V G   +     +V+++  +   A+  L M  ++   G
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMG 536

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  +  YN ++              ++ +M   G+  ++ TYN L+   C ++ +  A+
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  +M  +G +P+                              V  YN L+ GL     
Sbjct: 597 AVHSQMLTEGVSPN------------------------------VETYNILLGGLSAARL 626

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I+EA  L+ +M +RG+ PN  TY  ++S    +GN++  + +  +M  +G  P   ++  
Sbjct: 627 IKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNV 686

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG---LCSNGSMDEAVSVSYQ-- 295
           L+  +  G +  +A +L   M   G  PN   Y  LI G   L     +++++  SYQ  
Sbjct: 687 LISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAE 746

Query: 296 -------MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
                  M E    P   T + +    AK G    A +I N++
Sbjct: 747 AKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKL 789



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 101/181 (55%), Gaps = 2/181 (1%)

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+  +  E   ++  +N L+DG  R   +  A EL+  ++  G   +IVTYNT+++G C+
Sbjct: 5   LNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK 64

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G +  A +L+G++ +   + + IT+  +I AYCK   + +A+ + D +       PD++
Sbjct: 65  IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKS-LVPDVV 123

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +YT ++ G+C SG ++EA    ++M   G+ PN  ++  L+ SLF   G++   ++L   
Sbjct: 124 TYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKE-GNVAEAFVLQGR 182

Query: 578 M 578
           M
Sbjct: 183 M 183


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 258/544 (47%), Gaps = 42/544 (7%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +PT+  YN ++  L + ++       +++M  +G EP+V  +  L+   CK  +    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--RELAMRFGSGVSVYNALINGLCK 177
           +KLL     K   PD   YT+++   CK G ++    R +  +    V  Y  +I GL  
Sbjct: 62  HKLL-NQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL----------------- 220
             +I+EA  L  E+   G  PNV+ Y+ +I  L   G +E  L                 
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 221 ------------------GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
                              +  QM  +GC P+  ++T+L+ G+    +  EA  L + M+
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
            +G  P  V Y +++HG C    ++EA  V  QM E  C P +  +++L+  +   G   
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A Q+   M + GC+P+V+ YT ++ +L       +A  + + M  + C P+ +T+ T I
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           +     G V+ A ++L+ M +    P+   YN L+DG +++ RV +AF +   +   GI+
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIK 420

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNNA-I 500
            N VT+N ++HG+ + G    AF L  +ML  E      +++ I+I    K G+V+ A +
Sbjct: 421 PNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFL 480

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           Q  + I  G    P+  +YTSL++ +  +G + EA   ++ M+  G+ P+   ++ L+  
Sbjct: 481 QFQEMIDRG--IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITG 538

Query: 561 LFSN 564
           L  +
Sbjct: 539 LIDS 542



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 243/536 (45%), Gaps = 45/536 (8%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++ SVI+ Y + G  +     ++R         V  Y  ++  L    R      ++  +
Sbjct: 78  LYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEEL 134

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K  G  PNV  Y  ++  L K  R++   K   EM    C P   +YT ++  +CK   +
Sbjct: 135 KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQML 194

Query: 152 EEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +A    E  ++ G       Y  LI+G  K  K++EA  LL  M+ +G +P  +TY +I
Sbjct: 195 PDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSI 254

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C +  +  +  ++ QM  RGC P +  FTSLL  YL  GR  EA  +   M   G 
Sbjct: 255 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 314

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+V+ Y++LI  L S G + EA  V   M E  C P+  TY  +I  F+K GN+  A +
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 374

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I   M  +G  P+  AY  ++    +     QA  + ++M      PN VTFN  + GL 
Sbjct: 375 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLF 434

Query: 387 GCGRVDWAMKLLDQM-KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
             G+ D A  L  +M ++ E  P + +Y  L+DGL +  RV EAF    E+   GI    
Sbjct: 435 KDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPEC 494

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TY ++++ + +AG + EA +L+  M+  G                              
Sbjct: 495 HTYTSLIYSLAKAGRIPEAKKLVEDMVKLGV----------------------------- 525

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                  NPD+ +Y++L+ G+ +S  +  A+   Q+M+  G  PN  T+ VL R  
Sbjct: 526 -------NPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 574



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 234/470 (49%), Gaps = 6/470 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + +VI         ++A ++F  ++  G  P V  Y  ++D LL   R       +  M 
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
                P   TY +++  LCK   +  A K+  +M  KGC PD ++YTT++    K  +++
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230

Query: 153 EAREL-AMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EAR+L  +    G       Y ++++G CK   I EA  ++ +M +RG +P +  +++++
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           S     G  E +  +L +M  RGC P++  +TSL+      GR  EA  +++ MI +G  
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+ + Y T+I      G+++ A  +   M ++   P+   Y++L+DG+ K   +  A  +
Sbjct: 351 PDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGV 410

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLC 386
           ++RM+++G  PN V +  ++  L ++    +A SL ++M   E  PP  V++   I GL 
Sbjct: 411 YDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLG 470

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             GRV  A     +M     +P   TY  L+  L +  R+ EA +LV ++ K G+  ++ 
Sbjct: 471 KAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQ 530

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            Y+ ++ G+  + MV  A+ +  +M+  G   + +T+ ++   +   G+ 
Sbjct: 531 AYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 580



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 209/467 (44%), Gaps = 41/467 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ID    L +++K  G S +   + +VI+   + G  E  LK F  +    
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT   Y  ++D L           ++  M + G  P+  TY  L+    K +++D A 
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           KLL  M  KG  P AV+Y +IV   CKL  + EA+E+  +        G+ ++ +L++  
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVI---------------------------------- 201
             + + EEA+ +L EM  RG  P+VI                                  
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353

Query: 202 -TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            TY TII +   +GNVE +  IL  M   G  P+  ++ SL+ GY+   R  +A  +++R
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAG 319
           M+  G  PN V ++ L+HGL  +G  D A S+  +M E+   PP + +Y+ LIDG  KAG
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A   +  MI  G  P    YT ++  L +     +A  L+E M      P+   ++
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             I GL     VD A  +  +M +  C PN  TY  L  G     R 
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA 580



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 161/325 (49%), Gaps = 13/325 (4%)

Query: 9   CEIDGV---QYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKP 63
           C++D +   + ++ QM+  G  C  G+FI  S+++ Y   G AE+A ++   +   G  P
Sbjct: 259 CKLDMINEAKEVIAQMRERG--CEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP 316

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V +Y  ++D L +  R      ++ +M   G  P+  TY  +++   K   V+ A ++L
Sbjct: 317 DVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 376

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKE 178
             M   G  PD  +Y +++    KL +V++A     R +A         +N L++GL K+
Sbjct: 377 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 436

Query: 179 HKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            K + AF L  EM+++  + P +++Y+ +I  L   G V  +     +M  RG  P  H+
Sbjct: 437 GKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHT 496

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +TSL+      GR  EA  L   M++ G  P+V AYS LI GL  +  +D A  V  +M 
Sbjct: 497 YTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMM 556

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLL 322
           +  C PN  TY  L  GF  AG  L
Sbjct: 557 KRGCAPNEVTYKVLRRGFRAAGRAL 581



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 61/132 (46%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+   + G   +A   F  + + G+ P    Y  ++ +L    R      +  +M + G
Sbjct: 465 LIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLG 524

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+V  Y+ L+  L  ++ VD A+ +  EM  +GCAP+ V+Y  +       G+  +  
Sbjct: 525 VNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLE 584

Query: 156 ELAMRFGSGVSV 167
            +   F  GV++
Sbjct: 585 AVKQHFSQGVAM 596


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 158/579 (27%), Positives = 286/579 (49%), Gaps = 13/579 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + L+ +M   G++    ++   I    + G+ E+A  +F  +   GL P  + Y  +
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++    E        +   MK+  +  + +TY  ++K +C +  +DGAY ++ EM   GC
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 132 APDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            P+ V YTT++ +  +  +  +A R L      G++     YN+LI GL K  +++EA  
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L EMV+ G+ PN  TY   IS   +     ++   + +M   G  PN    T L+  Y 
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              +  EA   +  M+ +G L +   Y+ L++GL  N  +D+A  +  +M      P+V 
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y  LI+GF+K GN+  AS I++ M+  G +PNV+ Y  ++   C++    +A  L+++M
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           + +   PN VT+ T I G C  G +  A +L D+MK    +P+   Y  L+DG  R+N V
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-----KLDAI 481
           + A  +    +K G   +   +N +++ V + G      ++L + L++G+     K + +
Sbjct: 749 ERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNR-LMDGSFDRFGKPNDV 806

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I   CK+G +  A +L  +++      P +I+YTSLL G    G   E F    +
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNAN-LMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            +  GI P+   ++V++ +          + ++D + A 
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 257/543 (47%), Gaps = 8/543 (1%)

Query: 26  VSCSEGVFISVINSYRRVGL-AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           V   + V       +R   L  + ALK+   +   GL P    Y+ ++D L    R    
Sbjct: 237 VQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDA 296

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   M   G+  +  TY++L+  L K    D A  L+ EM + G       Y   +  
Sbjct: 297 KSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICV 356

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           + K G +E+A+ L     A         Y +LI G C+E  + + + LL EM  R I  +
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY T++  +C  G+++ +  I+ +M   GC PN+  +T+L+K +L   R  +A  +  
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  +G  P++  Y++LI GL     MDEA S   +M EN   PN  TY A I G+ +A 
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A +    M   G  PN V  T ++   C+     +A S    M  +    +  T+ 
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYT 596

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + GL    +VD A ++  +M+     P++ +Y  L++G  ++  +++A  +  E+ + 
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G+  N++ YN +L G CR+G + +A +LL +M ++G   +A+T+  II  YCK G +  A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +L D ++  G   PD   YT+L+ G C    ++ A I +     +G   + A +N L+ 
Sbjct: 717 FRLFDEMKLKG-LVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALIN 774

Query: 560 SLF 562
            +F
Sbjct: 775 WVF 777



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 266/592 (44%), Gaps = 63/592 (10%)

Query: 29  SEGVFISVI-NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
            +GV   ++ + Y   G  E+A+ +F       L P +     +LDALL  NR  +   +
Sbjct: 149 DDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNN---------------------RVDGAYKLLVEM 126
           Y  M    +  +V TY++L+ A C+                        VDGA KL   M
Sbjct: 209 YKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESM 268

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKI 181
             KG  P   +Y  ++  +CK+ ++E+A+ L +   S GVS+    Y+ LI+GL K    
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  L+ EMV  GI+     Y   I  +   G +E +  +   M   G  P   ++ SL
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASL 388

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           ++GY       +  +L   M +   + +   Y T++ G+CS+G +D A ++  +M  + C
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV  Y+ LI  F +      A ++   M   G +P++  Y  ++  L +     +A S
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN------------ 409
            + +M      PN  T+  FI G         A K + +M++   LPN            
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568

Query: 410 -----------------------ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
                                    TY  L++GL + ++V +A E+  E+   GI  ++ 
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +Y  +++G  + G + +A  +  +M+ EG   + I +N+++  +C+ G++  A +LLD +
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              G  +P+ ++Y +++ G C SG + EAF    +M  +G+ P+   +  LV
Sbjct: 689 SVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 247/540 (45%), Gaps = 52/540 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +MK   +  S   + +V+      G  + A  +   +   G +P V IY  ++   L
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +RF     +   MK  G+ P++F YN L+  L K  R+D A   LVEM   G  P+A 
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF 523

Query: 137 SYTTIVSSICKLGQ-------VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +Y   +S   +  +       V+E RE  +       +   LIN  CK+ K+ EA     
Sbjct: 524 TYGAFISGYIEASEFASADKYVKEMRECGVL--PNKVLCTGLINEYCKKEKVIEACSAYR 581

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MVD+GI  +  TY+ +++ L     V+ +  I  +M  +G  P++ S+  L+ G+   G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +AS +++ M+ EG  PNV+ Y+ L+ G C +G +++A  +  +M      PN  TY 
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI----EK 365
            +IDG+ K+G+L  A ++++ M   G  P+   YT +V   C+ N   +A ++     + 
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761

Query: 366 MAFENCP----------------------------------PNTVTFNTFIKGLCGCGRV 391
            A    P                                  PN VT+N  I  LC  G +
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A +L  QM+    +P + TY  LL+G  ++ R  E F +  E    GI+ + + Y+ I
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881

Query: 452 LHGVCRAGMVVEAFQLLGKMLI-----EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           ++   + GM  +A  L+ +M       +G KL   T   ++  + K G++  A ++++ +
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/426 (23%), Positives = 205/426 (48%), Gaps = 15/426 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E  E       +++M+  GV  ++ +   +IN Y +     +A   +  + + G+    K
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAK 593

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  +++ L   ++      I+  M+  G+ P+VF+Y +L+    K   +  A  +  EM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKI 181
             +G  P+ + Y  ++   C+ G++E+A+EL               Y  +I+G CK   +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EAF L  EM  +G+ P+   Y+T++   C + +VE ++ I G    +GC  +   F +L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNAL 772

Query: 242 LKGYLLGGRTHEASDLWNRMIREGF----LPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +      G+T   +++ NR++   F     PN V Y+ +I  LC  G+++ A  + +QM+
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             +  P V TY++L++G+ K G       +++  I+ G  P+ + Y+ ++    +  M  
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTT 892

Query: 358 QAHSLIEKMAFEN-----CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +A  L+++M  +N     C  +  T    + G    G ++ A K+++ M + + +P+  T
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952

Query: 413 YNELLD 418
             EL++
Sbjct: 953 VIELIN 958



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 37/314 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+  + LL +M V+G+  +   + ++I+ Y + G   +A ++F  ++  GL P   +Y 
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL-----------LKALCKNNRVDG 118
            ++D     N       I+   K+ G   +   +N L           LK    N  +DG
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDG 795

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALIN 173
           ++       ++   P+ V+Y  ++  +CK G +E A+EL  +  +      V  Y +L+N
Sbjct: 796 SF-------DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLN 848

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR---- 229
           G  K  +  E F +  E +  GI+P+ I YS II++    G    +L ++ QMF +    
Sbjct: 849 GYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVD 908

Query: 230 -GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC  +I +  +LL G+   G    A  +   M+R  ++P+      LI+  C       
Sbjct: 909 DGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC------- 961

Query: 289 AVSVSYQMEENSCP 302
            +S + ++E ++ P
Sbjct: 962 -ISSNQRVEADAVP 974



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 34/232 (14%)

Query: 350 LCQNNMFHQAHSLIEKMAFENCP-------------------PNTVTFNTFIKGLCGCGR 390
           LC    F +A S++E+M   N P                    + V F     G    G 
Sbjct: 107 LCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGY 166

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A+ +       E +P ++    LLD LLR NR+   +++   + +  +  ++ TY+ 
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++   CRAG V      LGK ++  T+ +  T  +          V+ A++L + +   G
Sbjct: 227 LIIAHCRAGNV-----QLGKDVLFKTEKEFRTATL---------NVDGALKLKESMICKG 272

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              P   +Y  L+ G+C    +++A   L +M + G+  +  T+++L+  L 
Sbjct: 273 -LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 153/505 (30%), Positives = 249/505 (49%), Gaps = 33/505 (6%)

Query: 33  FISVINSYRRV-------GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           FI   ++Y +V          E A  +F  ++  GL   V  Y  ++D+           
Sbjct: 479 FIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
             ++ M+  G  PNV TY  L+ A  K  +V  A +L   M ++GC P+ V+Y+ ++   
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598

Query: 146 CKLGQVEEARELAMRF-GS---------------------GVSVYNALINGLCKEHKIEE 183
           CK GQ+E+A ++  R  GS                      V +Y AL++G CK H++EE
Sbjct: 599 CKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEE 658

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  LL  M   G +PN I Y  +I  LC VG ++ +  +  +M   G    +++++SL+ 
Sbjct: 659 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLID 718

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            Y    R   AS + ++M+     PNVV Y+ +I GLC  G  DEA  +   MEE  C P
Sbjct: 719 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 778

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           NV TY+A+IDGF + G +    ++  RM S G +PN V Y  ++   C+N     AH+L+
Sbjct: 779 NVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLL 838

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E+M   + P +   +   I+G         ++ LLD++ Q +  P ++ Y  L+D L++ 
Sbjct: 839 EEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKA 896

Query: 424 NRVKEAFELVTEIEKCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
            R++ A  L+ E+      L     TYN+++  +C A  V +AF+L  +M  +G   +  
Sbjct: 897 QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQ 956

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRI 506
           TF  +I    +  K++ A+ LLD I
Sbjct: 957 TFCSLIKGLFRNSKISEALLLLDFI 981



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 256/530 (48%), Gaps = 31/530 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR---- 115
           G  P+ KI+N ++ A       S    +   M + G  P    YNIL+ ++C +      
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSC 426

Query: 116 --VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVY 168
             ++ A K   EM   G   + ++ ++    +C  G+ E+A    RE+    F    S Y
Sbjct: 427 HLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           + ++  LC   K+E AF L  EM   G+  +V TY+ ++ S C  G +E +     +M  
Sbjct: 487 SKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            GC PN+ ++T+L+  YL   +   A++L+  M+ EG LPN+V YS LI G C  G M++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEK 606

Query: 289 AVSVSYQM-----------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           A  +  +M                 ++NS  PNV  Y AL+DGF K   +  A ++ + M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAM 666

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              GC PN + Y  ++  LC+     +A  +  +M+    P    T+++ I       R 
Sbjct: 667 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQ 726

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A K+L +M +  C PN+  Y E++DGL +V +  EA++L+  +E+ G Q N+VTY  +
Sbjct: 727 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 786

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G  R G +    +LL +M  +G   + +T+ ++I   CK G ++ A  LL+ ++    
Sbjct: 787 IDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTH 845

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           W      Y  ++ G   +    E+   L ++  +   P  + + +LV +L
Sbjct: 846 WPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNL 893



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/655 (24%), Positives = 266/655 (40%), Gaps = 132/655 (20%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME------------------- 97
           R+ G K T  +YN ++D ++ ++   +   +   ++ D  E                   
Sbjct: 157 RQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSF 216

Query: 98  ----------------PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
                           P+  TYN L++A  K + +D A  +  EM       D  +    
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCY 276

Query: 142 VSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
             S+CK+G+  EA  L     F      Y  LI+GLC+    EEA   L  M      PN
Sbjct: 277 AYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TYST++    +   +     +L  M + GC P+   F SL+  Y   G    A  L  
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLK 396

Query: 260 RMIREGFLPNVVAYSTLIHG---------------------------------------- 279
           +M++ G  P  V Y+ LI                                          
Sbjct: 397 KMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTR 456

Query: 280 -LCSNGSMDEAVSVSYQMEENSCPPNVTTYSA---------------------------- 310
            LCS G  ++A SV  +M      P+ +TYS                             
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVA 516

Query: 311 -------LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
                  ++D F KAG +  A + +N M   GC+PNVV YT ++    +      A+ L 
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-------------KQYEC---- 406
           E M  E C PN VT++  I G C  G+++ A ++ ++M             KQY+     
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSE 636

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            PN+  Y  LLDG  +++RV+EA +L+  +   G + N + Y+ ++ G+C+ G + EA +
Sbjct: 637 RPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 696

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +  +M   G      T++ +I  Y K  + + A ++L ++       P+++ YT ++ G+
Sbjct: 697 VKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS-CAPNVVIYTEMIDGL 755

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           C  G   EA+  +Q M  +G  PN  T+  ++   F  +G +     L + M +K
Sbjct: 756 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG-FGRIGKIETCLELLERMGSK 809



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 17/318 (5%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  + LL  M +EG   ++ V+ ++I+   +VG  ++A ++   + E G   T+  Y+ 
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSS 715

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D      R  + + + S M  +   PNV  Y  ++  LCK  + D AYKL+  M  KG
Sbjct: 716 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 775

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAF 185
           C P+ V+YT ++    ++G++E   EL  R GS GV+     Y  LI+  CK   ++ A 
Sbjct: 776 CQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 835

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVE--TSLGILGQMFVRGCNPNIHSFTSLLK 243
            LL EM       +   Y  +I       N E   SLG+L ++      P +  +  L+ 
Sbjct: 836 NLLEEMKQTHWPTHAAGYRKVIEGF----NKEFIESLGLLDEIGQDDTAPFLSLYRLLVD 891

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYS----TLIHGLCSNGSMDEAVSVSYQMEEN 299
             +   R   A  L   +    F   +V YS    +LI  LC    +D+A  +  +M + 
Sbjct: 892 NLIKAQRLEMALRLLEEV--ATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKK 949

Query: 300 SCPPNVTTYSALIDGFAK 317
              P + T+ +LI G  +
Sbjct: 950 GVIPEMQTFCSLIKGLFR 967



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 143/309 (46%), Gaps = 9/309 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q +  +M   G   +   + S+I+ Y +V   + A K+  ++ E  
Sbjct: 681 LIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 740

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V IY  ++D L    +      +   M+  G +PNV TY  ++    +  +++   
Sbjct: 741 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCL 800

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +LL  MG+KG AP+ V+Y  ++   CK G ++ A  L        + +  + Y  +I G 
Sbjct: 801 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF 860

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM--FVRGCNP 233
            KE    E+  LL E+      P +  Y  ++ +L     +E +L +L ++  F      
Sbjct: 861 NKE--FIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVD 918

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL++   L  +  +A  L++ M ++G +P +  + +LI GL  N  + EA+ + 
Sbjct: 919 YSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978

Query: 294 YQMEENSCP 302
             +    CP
Sbjct: 979 DFISHMVCP 987



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 16/259 (6%)

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           SA+I  F  AG  +G             SP    Y  +V ++ +++       L++++  
Sbjct: 146 SAVISFFVWAGRQIGYKHT---------SP---VYNALVDLIVRDDDEKVPEELLQQIRD 193

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           ++        N  ++  C  G    A++ L ++K +   P+ +TYN L+   L+ + +  
Sbjct: 194 DDKEVFGEFLNVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDS 253

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  +  E+    ++++  T     + +C+ G   EA  L   M  E    D + +  +I 
Sbjct: 254 ASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLIS 310

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C+      A+  L+R+R      P++++Y++LL G  N   +      L  M+ EG  
Sbjct: 311 GLCEASLFEEAMDFLNRMRATS-CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369

Query: 549 PNFATWNVLVRSLFSNLGH 567
           P+   +N LV +  ++  H
Sbjct: 370 PSPKIFNSLVHAYCTSGDH 388


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/532 (25%), Positives = 274/532 (51%), Gaps = 8/532 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  +      P +  ++    A+    +F+++      ++ +G+  N++T NI+
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           +   C+  +   AY +L ++   G  PD  ++ T+++ +C  G+V +A  L  R      
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              +  YN+++NG+C+      AF +L +M +R +  +V TYSTII SLC  G ++ ++ 
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G   ++ ++ SL++G    G+ ++ + L   M+    +PNV+ ++ L+    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  +  +M      PN+ TY+ L+DG+     L  A+ + + M+ N CSP++V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +T ++K  C          +   ++      N VT++  ++G C  G++  A +L  +M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             +  LP++ TY  LLDGL    ++++A E+  +++K  + L IV Y TI+ G+C+ G V
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A+ L   +  +G K + +T+ ++I   CK+G ++ A  LL ++   G   P+  +Y +
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNT 548

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           L+      G +  +   +++M + G   + ++  +++  L S  G L   ++
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS--GELDKSFL 598



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/474 (27%), Positives = 246/474 (51%), Gaps = 5/474 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +Q+++ G++ +      +IN + R      A  +  ++ + G +P    +N +++ L  E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLE 171

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            + S    +   M  +G +P++ TYN ++  +C++     A+ +L +M  +    D  +Y
Sbjct: 172 GKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTY 231

Query: 139 TTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +TI+ S+C+ G ++ A    +E+  +   S V  YN+L+ GLCK  K  +   LL +MV 
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I PNVIT++ ++      G ++ +  +  +M  RG +PNI ++ +L+ GY +  R  E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+++ + M+R    P++V +++LI G C    +D+ + V   + +     N  TYS L+ 
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF ++G +  A +++  M+S+G  P+V+ Y  ++  LC N    +A  + E +       
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
             V + T I+G+C  G+V+ A  L   +      PN+ TY  ++ GL +   + EA  L+
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            ++E+ G   N  TYNT++    R G +  + +L+ +M   G   DA +  ++I
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 209/402 (51%), Gaps = 1/402 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  EM+     P ++ +S   S++         L    Q+ + G   NI++  
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +T  A  +  ++++ G+ P+   ++TLI+GLC  G + +AV +  +M EN
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C P++ TY+++++G  ++G+   A  +  +M       +V  Y+ ++  LC++     A
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL ++M  +    + VT+N+ ++GLC  G+ +    LL  M   E +PN+ T+N LLD 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            ++  +++EA EL  E+   GI  NI+TYNT++ G C    + EA  +L  M+      D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TF  +I  YC   +V++ +++   I   G    + ++Y+ L+ G C SG ++ A    
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRG-LVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           Q+M++ G+ P+  T+ +L+  L  N      + I +D+  +K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 210/410 (51%), Gaps = 5/410 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G       + S++N   R G    A  M  ++ E  +K  V  Y+ I+D+L 
Sbjct: 180 LVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLC 239

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++  M+  G++ +V TYN L++ LCK  + +    LL +M ++   P+ +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++    K G+++EA EL       G+S     YN L++G C ++++ EA  +L  M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V     P+++T++++I   C V  V+  + +   +  RG   N  +++ L++G+   G+ 
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+  M+  G LP+V+ Y  L+ GLC NG +++A+ +   ++++     +  Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  K G +  A  ++  +   G  PNV+ YT M+  LC+     +A+ L+ KM  +  
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            PN  T+NT I+     G +  + KL+++MK      + ++   ++D LL
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 176/345 (51%), Gaps = 5/345 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L ++M+ +G+  S   + S++    + G       +   +    + P V  +N 
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +LD  + E +    N +Y  M   G+ PN+ TYN L+   C  NR+  A  +L  M    
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
           C+PD V++T+++   C + +V++     R ++ R   +    Y+ L+ G C+  KI+ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EMV  G+ P+V+TY  ++  LCD G +E +L I   +     +  I  +T++++G 
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             GG+  +A +L+  +  +G  PNV+ Y+ +I GLC  GS+ EA  +  +MEE+   PN 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            TY+ LI    + G+L  ++++   M S G S +  +   ++ +L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 176/376 (46%), Gaps = 8/376 (2%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS-------FTSLLK 243
           M+ R I  N+  +  +   L   G + T L      F+  C  +  S       F   L+
Sbjct: 2   MIQRSITTNLKAFRMVQPHLLKTGTLRTDLLCTISSFLSSCERDFSSITNGNVCFRERLR 61

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
             ++  +  +A  L+  MIR   LP +V +S     +      +  +    Q+E N    
Sbjct: 62  SGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N+ T + +I+ F +      A  +  +++  G  P+   +  ++  LC      +A  L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M    C P+ VT+N+ + G+C  G    A  +L +M++     ++ TY+ ++D L R 
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +  A  L  E+E  GI+ ++VTYN+++ G+C+AG   +   LL  M+      + ITF
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N+++  + K+GK+  A +L   +   G  +P+II+Y +L+ G C    + EA   L  M+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 544 NEGICPNFATWNVLVR 559
                P+  T+  L++
Sbjct: 361 RNKCSPDIVTFTSLIK 376


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 154/519 (29%), Positives = 260/519 (50%), Gaps = 6/519 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           Q L +F ++      P VK  N IL  L  +N       +Y  M   G+ P V TYN +L
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS 166
            + CK   V  A  L+ +M  +GC P  V++  +++ + K G++++A+ L      +G+ 
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLR 304

Query: 167 V----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           V    YN LI G CK+  + EA  L  EMV RG+ P V +++TI+   C  G +  +   
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQ 364

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L  M  +   P+I S+ +L+ G+   G   EA  L + +       N+V Y+TLI GLC 
Sbjct: 365 LSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCR 424

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G ++ A+ +   M      P+V TY+ L++G  K GN+L A + ++ M+  G +P+  A
Sbjct: 425 LGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFA 484

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT  +    +     +A  L E+M  +  PP+ +T+N F+ GLC  G ++ A +LL +M 
Sbjct: 485 YTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMI 544

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +   +P+  TY   +   +    ++E  E+  ++   G    +VTY  ++H     G + 
Sbjct: 545 RDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLD 604

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            A     +M  +G   + IT+N++I  +CK  K++ A +    ++  G + P+  +YT L
Sbjct: 605 WAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIF-PNKYTYTIL 663

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   CN G  QEA     +ML + I P+  T   L++ L
Sbjct: 664 INENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKL 702



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 248/496 (50%), Gaps = 6/496 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G+  +   + ++++S+ + G  ++AL +  +++E G  P+   +N +++ L  +      
Sbjct: 232 GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQA 291

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   M + G+  + +TYN L+   CK   +  A  L  EM  +G +P   S+ TI+  
Sbjct: 292 KGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYG 351

Query: 145 ICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            CK G++ +AR+     L       +  YN LI G C+   I EAF LL E+  R +  N
Sbjct: 352 FCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           ++TY+T+I  LC +G++ET+L +   M  RG +P++ ++T L+ G    G    A + ++
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFD 471

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M+  G  P+  AY+  I G    G   +A  +  +M     PP+V TY+  ++G  K G
Sbjct: 472 EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           NL  A ++  +MI +G  P+ V YT  +    +N    +   +   M      P  VT+ 
Sbjct: 532 NLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYT 591

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I      GR+DWAM    +M++   +PN+ TYN L++G  +V ++ +A +   E+++ 
Sbjct: 592 VLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEK 651

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  N  TY  +++  C  G   EA +L  +ML +  + D+ T   ++    K  KV  A
Sbjct: 652 GIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV-QA 710

Query: 500 IQLLDRIRGGGEWNPD 515
           +Q ++ +   G+   D
Sbjct: 711 VQFIESLILDGDRTID 726



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 243/488 (49%), Gaps = 7/488 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+    +  E+     L+ +M+  G   SE  F  +IN   + G  +QA  +   + + G
Sbjct: 243 MLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAG 302

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+ +   YN ++     +        ++  M   G+ P V ++N ++   CK  ++  A 
Sbjct: 303 LRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDAR 362

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           + L +M  K   PD +SY T++   C+LG + EA     EL  R     +  YN LI+GL
Sbjct: 363 QQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGL 422

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +E A  L  +M++RGI P+V+TY+ +++  C +GN+  +     +M   G  P+ 
Sbjct: 423 CRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQ 482

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+ + G L  G T +A  L   M+ +GF P+V+ Y+  ++GLC  G+++EA  +  +
Sbjct: 483 FAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQK 542

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   P+  TY++ +    + G+L    +I+  M+S G +P VV YT ++     N  
Sbjct: 543 MIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGR 602

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A +   +M  +   PN +T+N  I G C   ++D A K   +M++    PN  TY  
Sbjct: 603 LDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTI 662

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++    + + +EA  L  ++    I+ +  T+  +L  + +    V+A Q +  ++++G
Sbjct: 663 LINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDK-DYKVQAVQFIESLILDG 721

Query: 476 TK-LDAIT 482
            + +DA T
Sbjct: 722 DRTIDANT 729



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 185/371 (49%), Gaps = 2/371 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+V   + I+  L D   +  +L +   M   G  P + ++ ++L  +  GG    A DL
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             +M   G  P+ V ++ LI+GL   G + +A  +  +M +     +  TY+ LI G+ K
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G L+ A  +W  M++ G SP V ++  ++   C+      A   +  M  +N  P+ ++
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +NT I G C  G +  A  LLD+++      NI TYN L+DGL R+  ++ A +L  ++ 
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             GI  ++VTY  +++G C+ G ++ A +   +ML  G   D   +   I    K G   
Sbjct: 440 NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTA 499

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A +L + +   G + PD+I+Y   + G+C  G ++EA   LQKM+ +G  P+  T+   
Sbjct: 500 KAFKLQEEMLTKG-FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSF 558

Query: 558 VRSLFSNLGHL 568
           + +   N GHL
Sbjct: 559 MHAHMEN-GHL 568



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 174/342 (50%), Gaps = 8/342 (2%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ GYL     ++   ++ +M+R  FLP+V   + ++  L     + +A+ V   M E  
Sbjct: 177 LIGGYL----NYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG 232

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P VTTY+ ++  F K G +  A  +  +M   GC P+ V +  ++  L +     QA 
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            LI++MA      +  T+N  I G C  G +  A+ L ++M      P + ++N ++ G 
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +  ++ +A + ++++ K  +  +I++YNT+++G CR G + EAF LL ++       + 
Sbjct: 353 CKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNI 412

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N +I   C+ G +  A++L + +   G  +PD+++YT L+ G C  G M  A  +  
Sbjct: 413 VTYNTLIDGLCRLGDLETALKLKEDMINRG-IHPDVVTYTVLVNGACKLGNMLMAKEFFD 471

Query: 541 KMLNEGICPN-FATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +ML+ G+ P+ FA    +V  L   LG     + L + M  K
Sbjct: 472 EMLHVGLAPDQFAYTARIVGEL--KLGDTAKAFKLQEEMLTK 511



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 125/271 (46%), Gaps = 37/271 (13%)

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V VL    + +Q   + EKM      P+    N  +K L     +  A+++   M +Y 
Sbjct: 173 IVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG 232

Query: 406 CLPNITTYNELL-----------------------------------DGLLRVNRVKEAF 430
             P +TTYN +L                                   +GL +   +++A 
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L+ E+ K G++++  TYN ++ G C+ G++VEA  L  +M+  G      + N I+Y +
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK+GK+++A Q L  +       PDIISY +L++G C  G + EAFI L ++    +  N
Sbjct: 353 CKEGKMSDARQQLSDMLKKN-LMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             T+N L+  L   LG L     L + M N+
Sbjct: 412 IVTYNTLIDGL-CRLGDLETALKLKEDMINR 441


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 252/486 (51%), Gaps = 43/486 (8%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+ Y R G  + AL++   I    + P    YN +L  L    ++     + + M
Sbjct: 160 TYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEM 216

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R+   PN  T+   +++ C+N  +D A +LL +M   GC PD V Y+T+++   + G V
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 152 EEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           ++A +L   M        YNA + GLC   + E+   L+ EMV +G  PN  T+S +ISS
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 210 LCDVGNVETSLGILGQMFVRGCNPN-------IHS------------------------- 237
           LC    V++++ +L QM   GC P+       I+S                         
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALG 396

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F ++LKG+    R H+AS+L  +M R+      + ++ LI  LC NG ++ A  V  QM 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMP 456

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C P++ TYS+L++GF++ G +  A Q++  M    C P++ +Y  ++K LC+   + 
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 513

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  LI +M  ++CPPN VTFN  I  LC  G VD A+++L+QM  Y   P+I TYN L+
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G     R+ +A +L++ +     + + ++YN+ L G+CRA    +A +L+ +ML     
Sbjct: 574 NGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 630

Query: 478 LDAITF 483
            + +TF
Sbjct: 631 PNEVTF 636



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 245/503 (48%), Gaps = 50/503 (9%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ-----VEE 153
           NV TY  L+   C++ R+D A +L+  M     APD  +Y T++  +C   +        
Sbjct: 157 NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELM 213

Query: 154 ARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           A  +  R       +   I   C+   ++ A  LL +M   G  P+V+ YST+I+   + 
Sbjct: 214 AEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQ 273

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G+V+ +L +L  M    C PN   + + LKG  +  R  +  +L   M+R+G  PN   +
Sbjct: 274 GHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S LI  LC N  +D AV V  QME+  C P+   Y+ +I+  ++ G +  A ++ N M+ 
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV- 389

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             C P+ + +  ++K  C+   +H A  LI +M  ++CP   +TFN  I  LC  G V++
Sbjct: 390 --CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNY 447

Query: 394 AMKLLDQMKQYECLPNITTYNELLDG--------------------------------LL 421
           A ++ +QM +Y C P+I TY+ LL+G                                L 
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLC 507

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R  R ++A EL+ E+       N VT+N +++ +C+ G+V  A ++L +M   G+  D  
Sbjct: 508 RAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF 567

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N +I  + +QG++++A++LL  +       PD ISY S L G+C +   Q+A   + +
Sbjct: 568 TYNALINGFSEQGRLDDALKLLSTM----SCKPDAISYNSTLKGLCRAERWQDAEELVAE 623

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           ML     PN  T+      L  N
Sbjct: 624 MLRNKCTPNEVTFKYANHLLMPN 646



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 263/527 (49%), Gaps = 81/527 (15%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFG 162
           NIL+K LC   R+  A ++L  +     A DAVS+ T+V+  C+ G++ +A R L     
Sbjct: 94  NILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARA 152

Query: 163 SG---VSVYNALINGLCKEHKIEEAFWLLCEM-----------VDRGI------------ 196
           +G   V  Y ALI+G C+  ++++A  L+  M           V +G+            
Sbjct: 153 TGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEEAEEL 212

Query: 197 ---------DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
                     PN +T++T I S C  G ++ ++ +L QM   GC P++  +++L+ G+  
Sbjct: 213 MAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSE 272

Query: 248 GGRTHEASDLWN--------------------------------RMIREGFLPNVVAYST 275
            G   +A DL N                                 M+R+G  PN   +S 
Sbjct: 273 QGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSM 332

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI  LC N  +D AV V  QME+  C P+   Y+ +I+  ++ G +  A ++ N M+   
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV--- 389

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C P+ + +  ++K  C+   +H A  LI +M  ++CP   +TFN  I  LC  G V++A 
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYAT 449

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++ +QM +Y C P+I TY+ LL+G      V+ A +L   +     + +I +YN +L G+
Sbjct: 450 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGL 506

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CRA    +A +L+ +M+ +    + +TFNI+I + C++G V+ AI++L+++   G   PD
Sbjct: 507 CRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGS-TPD 565

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
           I +Y +L+ G    G + +A     K+L+   C P+  ++N  ++ L
Sbjct: 566 IFTYNALINGFSEQGRLDDAL----KLLSTMSCKPDAISYNSTLKGL 608



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 227/461 (49%), Gaps = 45/461 (9%)

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEM 191
           +S   ++  +C  G++ +A  +     +  +     +N L+ G C++ ++ +A  +L   
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGAA 150

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G   NV+TY+ +I   C  G ++ +L ++  M V    P+ +++ ++LKG  +  + 
Sbjct: 151 RATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMPV---APDTYTYNTVLKGLCIAKKW 206

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +L   MIR    PN V ++T I   C NG +D AV +  QM    C P+V  YS L
Sbjct: 207 EEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTL 266

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+GF++ G++  A  + N M+   C PN V Y   +K LC    +     L+ +M  + C
Sbjct: 267 INGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGC 323

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  TF+  I  LC    VD A+++L+QM++Y C P+   YN +++ L    RV +A  
Sbjct: 324 SPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALR 383

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+  +     + + + +N +L G CRA    +A +L+ +M  +   L  +TFNI+I   C
Sbjct: 384 LLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLC 440

Query: 492 KQGKVNNAIQLLDR----------------IRGGGEW---------------NPDIISYT 520
           + G VN A Q+ ++                + G  E                 PDI SY 
Sbjct: 441 QNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYN 500

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++L G+C +   ++A   + +M+ +   PN  T+N+L+ SL
Sbjct: 501 AVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSL 541



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 211/418 (50%), Gaps = 12/418 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL QM   G +    ++ ++IN +   G  +QAL +   +     KP    YN 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNA 297

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            L  L    R+  I  + + M R G  PN  T+++L+ +LC+NN VD A ++L +M   G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           C PD V+Y  I++S+ + G+V++A  L  +M        +NA++ G C+  +  +A  L+
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELI 417

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M         +T++ +I +LC  G V  +  +  QM    C P+I +++SLL G+   
Sbjct: 418 AQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQ 477

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G    A  L+  M  +   P++ +Y+ ++ GLC     ++A  +  +M    CPPN  T+
Sbjct: 478 GLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF 534

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LI+   + G +  A ++  +M + G +P++  Y  ++    +      A  L+  M+ 
Sbjct: 535 NILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS- 593

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             C P+ +++N+ +KGLC   R   A +L+ +M + +C PN  T+ +  + LL  NR 
Sbjct: 594 --CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF-KYANHLLMPNRA 648



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 8/310 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L+QM+  G       +  +INS    G  + AL++   +    
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMV 389

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP    +N +L       R+   + + + M RD       T+NIL+  LC+N  V+ A 
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYAT 449

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
           ++  +M    C PD V+Y+++++   + G VE A +L  +M     +  YNA++ GLC+ 
Sbjct: 450 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRA 509

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            + E+A  L+ EMV +   PN +T++ +I+SLC  G V+ ++ +L QM   G  P+I ++
Sbjct: 510 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTY 569

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G+   GR  +A  L + M      P+ ++Y++ + GLC      +A  +  +M  
Sbjct: 570 NALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLR 626

Query: 299 NSCPPNVTTY 308
           N C PN  T+
Sbjct: 627 NKCTPNEVTF 636


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 164/525 (31%), Positives = 255/525 (48%), Gaps = 9/525 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L  F  +   G+ P V+  N +L  L    R+  +  +Y  M +  +EP + TYN LL +
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 110 LCKNNRVDGAYKLLVEMGNK--GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV 165
             K  R D A  LL EM  +  GC  + V+Y  ++S + + G +E A +L  +MR     
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKA 312

Query: 166 S--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           S   YN LI  L +   +++   L  EM + GI P ++TY+ II  L     VE +    
Sbjct: 313 SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKF 372

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P++ ++ S+L GY   G   EA  L   + R G  P V+ Y+TLI G C  
Sbjct: 373 AEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 432

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++EA  +  +M E  C P+V TY+ L++G  K  NL  A + ++ M+S G  P+  AY
Sbjct: 433 GGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAY 492

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +         H+A  L E M  +   P+TVT+N  I GLC  G +  A  L  +M  
Sbjct: 493 NTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVS 552

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY  L+        + EA +L+  +   G+Q ++VTY  ++H  CR G +  
Sbjct: 553 DGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYS 612

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A+    KML  G + + IT+N++I+A C+ G+   A      +   G   P+  +YT L+
Sbjct: 613 AYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG-LAPNKYTYTLLI 671

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G C  G   +A     +M   GI P++ T N L +    + GH+
Sbjct: 672 DGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF--DKGHM 714



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 225/456 (49%), Gaps = 8/456 (1%)

Query: 12  DGVQYLLQQMKVEGVSC--SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           D    LL++M+ +G  C  ++  +  VI+   R G  E A K+   +R    K +   YN
Sbjct: 260 DEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYN 318

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ ALL       +  +   M+ +G+ P + TYN ++  L K+ +V+ A     EM   
Sbjct: 319 PLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAM 378

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSV--YNALINGLCKEHKIEEA 184
           G  PD ++Y ++++  CK G ++EA  L     R G   +V  YN LI+G C+   +EEA
Sbjct: 379 GLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEA 438

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  EMV++G  P+V TY+ +++    V N+  +     +M  +G  P+  ++ + +  
Sbjct: 439 RRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICA 498

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            L+ G TH+A  L   M+ +G  P+ V Y+ +I GLC  G++ +A  +  +M  +   P+
Sbjct: 499 ELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPD 558

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+ LI    + G L  A ++ N M+S+G  P+VV YT ++   C+    + A+    
Sbjct: 559 CITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFR 618

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM      PN +T+N  I  LC  GR   A     +M +    PN  TY  L+DG  R  
Sbjct: 619 KMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREG 678

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
              +A  L  E+ + GI  +  T+N +  G  +  M
Sbjct: 679 NWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHM 714



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 180/390 (46%), Gaps = 5/390 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E+  +  V+ L  +M+ EG+  +   + ++I+   +    E A   F  +R  G
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P +  YN +L+             +  +++R G+ P V TYN L+   C+   ++ A 
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           +L  EM  +GC PD  +YT +++   K+  +  ARE     L+         YN  I   
Sbjct: 440 RLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAE 499

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                  +AF L   M+ +GI P+ +TY+ II  LC  GN++ +  +  +M   G  P+ 
Sbjct: 500 LILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDC 559

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T L+  +   G   EA  L N M+ +G  P+VV Y+ LIH  C  G++  A     +
Sbjct: 560 ITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRK 619

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    PN  TY+ LI    + G  L A   ++ M+  G +PN   YT ++   C+   
Sbjct: 620 MLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGN 679

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +  A  L  +M     PP+  T N   KG 
Sbjct: 680 WADAIRLYFEMHQNGIPPDYCTHNALFKGF 709


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 181/671 (26%), Positives = 299/671 (44%), Gaps = 112/671 (16%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           + + L  K  I    + L +M+  G   +   +  +I    + G  ++ALK++ R+   G
Sbjct: 163 IFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG 222

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP++K Y+ ++ AL        I  +   M+  G+ PN++TY I ++ L +  R+D AY
Sbjct: 223 LKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAY 282

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR------------------ 160
            +L  M ++GC PD V+YT ++ ++C  G++++A+EL   MR                  
Sbjct: 283 GILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKF 342

Query: 161 --------------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                               +   V  Y  L+  LCK  K+++AF +L  M  RGI PN+
Sbjct: 343 GNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNL 402

Query: 201 ITYSTIISSLCDV-----------------------------------GNVETSLGILGQ 225
            TY+T+IS L ++                                   G+ E +L    +
Sbjct: 403 HTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEK 462

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  RG  P+I +  + L      GR  EA D++N +   G  P+ V Y+ ++      G 
Sbjct: 463 MKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQ 522

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D+A  +  +M    C P++   ++LID   KAG +  A Q++ R+     +P VV Y  
Sbjct: 523 IDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNI 582

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  L +     +A  L   M    CPPNTVTFN  +  LC    VD A+K+  +M    
Sbjct: 583 LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN 642

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C P++ TYN ++ GL++  R   AF    +++K  +  + VT  T+L GV + G V +A 
Sbjct: 643 CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAI 701

Query: 466 --------------------QLLGKMLIEGTKLDAITF-------------NII---IYA 489
                               +L+  +LIE    +AI+F             N+I   I  
Sbjct: 702 KIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRV 761

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            CKQ K  +A +L D+       +P   SY  L+ G+      + A     +M N G CP
Sbjct: 762 LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821

Query: 550 NFATWNVLVRS 560
           N  T+N+L+ +
Sbjct: 822 NIFTYNLLLDA 832



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 279/560 (49%), Gaps = 9/560 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    L   M+  GV+ +   ++  I+ Y ++G  E+AL  F ++++ G+ P++   N
Sbjct: 417 RLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACN 476

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             L +L    R      I++++   G+ P+  TYN+++K   K  ++D A KLL EM ++
Sbjct: 477 ASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSE 536

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           GC PD +   +++ ++ K G+V+EA ++      ++    V  YN LI GL KE K+ +A
Sbjct: 537 GCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKA 596

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M + G  PN +T++ ++  LC    V+ +L +  +M +  C+P++ ++ +++ G
Sbjct: 597 LDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYG 656

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPP 303
            +  GR   A   +++M ++   P+ V   TL+ G+  +G +++A+ +  + + ++    
Sbjct: 657 LIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQT 715

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +   +  L++       +  A      ++ N    +      +++VLC+      A  L 
Sbjct: 716 SNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLF 775

Query: 364 EKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +K        P   ++N  + GL GC   + A+KL  +MK   C PNI TYN LLD   +
Sbjct: 776 DKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGK 835

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R+ E FEL  E+   G + NI+T+N I+  + ++  + +A  L  +++         T
Sbjct: 836 SKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCT 895

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  +I    K G+   A+++ + +    +  P+   Y  L+ G   +G +  A    ++M
Sbjct: 896 YGPLIGGLLKAGRSEEAMKIFEEMPDY-QCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954

Query: 543 LNEGICPNFATWNVLVRSLF 562
           + EGI P+  ++ +LV  LF
Sbjct: 955 IKEGIRPDLKSYTILVECLF 974



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/557 (25%), Positives = 277/557 (49%), Gaps = 9/557 (1%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +ID    LL +M  EG      V  S+I++  + G  ++A +MF R+++  L PTV  YN
Sbjct: 522  QIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYN 581

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++  L  E +      ++ +MK  G  PN  T+N LL  LCKN+ VD A K+   M   
Sbjct: 582  ILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIM 641

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSG--VSVYNALINGLCKEHKIEEA 184
             C+PD ++Y TI+  + K G+   A        +F S   V++Y  L+ G+ K+ ++E+A
Sbjct: 642  NCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFLSPDHVTLY-TLLPGVVKDGRVEDA 700

Query: 185  FWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              ++ E V + G+  +   +  ++  +     +E ++     +       + +    L++
Sbjct: 701  IKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIR 760

Query: 244  GYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                  +  +A  L+++  +  G  P   +Y+ L+ GL      + A+ +  +M+   C 
Sbjct: 761  VLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCC 820

Query: 303  PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            PN+ TY+ L+D   K+  +    +++N M+  GC PN++ +  ++  L ++N  ++A  L
Sbjct: 821  PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDL 880

Query: 363  IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
              ++   +  P   T+   I GL   GR + AMK+ ++M  Y+C PN   YN L++G  +
Sbjct: 881  YYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGK 940

Query: 423  VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
               V  A +L   + K GI+ ++ +Y  ++  +   G V +A     ++ + G   D ++
Sbjct: 941  AGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVS 1000

Query: 483  FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
            +N++I    K  ++  A+ L   ++  G  +P++ +Y +L+    N+G + +A    +++
Sbjct: 1001 YNLMINGLGKSRRLEEALSLFSEMKNRG-ISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059

Query: 543  LNEGICPNFATWNVLVR 559
               G+ PN  T+N L+R
Sbjct: 1060 QFMGLEPNVFTYNALIR 1076



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/564 (26%), Positives = 255/564 (45%), Gaps = 67/564 (11%)

Query: 37  INSYRRVGLAEQALKMFYRIREF-GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           I + + +     AL  F  + +   +  T +  N++L+ L    R   +  ++  M++  
Sbjct: 93  IGALKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQV 152

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +  N  TY  + KAL     +  A   L +M   G   +A SY  ++             
Sbjct: 153 INRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLI------------- 199

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                       Y  L  G CKE     A  +   M+  G+ P++ TYS ++ +L    +
Sbjct: 200 ------------YFLLQPGFCKE-----ALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
             T + +L +M   G  PNI+++T  ++     GR  +A  +   M  EG  P+VV Y+ 
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI  LC+ G +D+A  +  +M  +S  P++ TY  L+  F   G+L    + W+ M ++G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            +P+VV YT +V+ LC++    QA  +++ M      PN  T+NT I GL    R+D A+
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 396 KLL-----------------------------------DQMKQYECLPNITTYNELLDGL 420
           +L                                    ++MK+   +P+I   N  L  L
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             + R++EA ++  +I  CG+  + VTYN ++    +AG + +A +LL +ML EG + D 
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           I  N +I    K G+V+ A Q+  R++   +  P +++Y  L+ G+   G + +A     
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDL-KLAPTVVTYNILITGLGKEGKLLKALDLFG 601

Query: 541 KMLNEGICPNFATWNVLVRSLFSN 564
            M   G  PN  T+N L+  L  N
Sbjct: 602 SMKESGCPPNTVTFNALLDCLCKN 625



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 240/525 (45%), Gaps = 43/525 (8%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  LG++ ++     L   MK  G   +   F ++++   +    + ALKMF R+    
Sbjct: 583  LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN 642

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P V  YN I+  L+ E R       Y  MK+  + P+  T   LL  + K+ RV+ A 
Sbjct: 643  CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK-FLSPDHVTLYTLLPGVVKDGRVEDAI 701

Query: 121  KLLVEMGNKG--------------CA------PDAVSYT----------------TIVSS 144
            K+++E  ++               C        +A+S+                  ++  
Sbjct: 702  KIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRV 761

Query: 145  ICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            +CK  +  +A++L  +F   +        YN L++GL   +  E A  L  EM + G  P
Sbjct: 762  LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCP 821

Query: 199  NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
            N+ TY+ ++ +      ++    +  +M  RGC PNI +   ++   +     ++A DL+
Sbjct: 822  NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY 881

Query: 259  NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
              +I   F P    Y  LI GL   G  +EA+ +  +M +  C PN   Y+ LI+GF KA
Sbjct: 882  YEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKA 941

Query: 319  GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
            GN+  A  ++ RMI  G  P++ +YT +V+ L        A    E++      P+TV++
Sbjct: 942  GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001

Query: 379  NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            N  I GL    R++ A+ L  +MK     P + TYN L+        V +A ++  E++ 
Sbjct: 1002 NLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQF 1061

Query: 439  CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             G++ N+ TYN ++ G  ++G    AF +  KM+I G   +A TF
Sbjct: 1062 MGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTF 1106



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 183/400 (45%), Gaps = 36/400 (9%)

Query: 23   VEGVSCS-----EGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALL 76
             EG+ C+     + + + +I    +   A  A K+F +  +  G  PT + YN ++D LL
Sbjct: 740  AEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLL 799

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              N       ++  MK  G  PN+FTYN+LL A  K+ R+D  ++L  EM  +GC P+ +
Sbjct: 800  GCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNII 859

Query: 137  SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            ++  I+S+                              L K + I +A  L  E++    
Sbjct: 860  THNIIISA------------------------------LVKSNSINKALDLYYEIISGDF 889

Query: 197  DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
             P   TY  +I  L   G  E ++ I  +M    C PN   +  L+ G+   G  + A D
Sbjct: 890  SPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACD 949

Query: 257  LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
            L+ RMI+EG  P++ +Y+ L+  L   G +D+AV    +++     P+  +Y+ +I+G  
Sbjct: 950  LFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLG 1009

Query: 317  KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
            K+  L  A  +++ M + G SP +  Y  ++       M  QA  + E++ F    PN  
Sbjct: 1010 KSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVF 1069

Query: 377  TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            T+N  I+G    G  D A  +  +M    C PN  T+ +L
Sbjct: 1070 TYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 69/141 (48%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++E L     +D   +  +++K+ G+      +  +IN   +    E+AL +F  ++  G
Sbjct: 969  LVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG 1028

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            + P +  YN ++              ++  ++  G+EPNVFTYN L++   K+   D A+
Sbjct: 1029 ISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAF 1088

Query: 121  KLLVEMGNKGCAPDAVSYTTI 141
             +  +M   GC+P+A ++  +
Sbjct: 1089 SVFKKMMIVGCSPNAGTFAQL 1109


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 231/421 (54%), Gaps = 7/421 (1%)

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLC 176
           L+  M  KGC PD V+Y  +V+ +CK G  + A  L   M  G    GV +YN +I+GLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K   +++A  L  EM  +GI PNV+TYS++IS LC+ G    +  +L  M  R  NP++ 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F++L+  ++  G+  EA  L++ M++    P++V YS+LI+G C +  +DEA  +   M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
               C P+V TY+ LI GF K   +    +++  M   G   N V Y  +++ L Q    
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  + ++M  +  PPN +T+NT + GLC  G+++ AM + + +++ +  P I TYN +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++G+ +  +V++ ++L   +   G++ ++V YNT++ G CR G   EA  L  +M  +GT
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             ++  +N +I A  + G    + +L+  +R  G       S   L+  + + G + ++F
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD--ASTIGLVTNMLHDGRLDKSF 420

Query: 537 I 537
           +
Sbjct: 421 L 421



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 203/377 (53%), Gaps = 7/377 (1%)

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L+  MV +G  P+++TY  +++ LC  G+ + +  +L +M      P +  + +++ G  
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                 +A +L+  M  +G  PNVV YS+LI  LC+ G   +A  +   M E    P+V 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T+SALID F K G L+ A ++++ M+     P++V Y+ ++   C ++   +A  + E M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             ++C P+ VT+NT IKG C   RV+  M++  +M Q   + N  TYN L+ GL +    
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA---FQLLGKMLIEGTKLDAITF 483
             A E+  E+   G+  NI+TYNT+L G+C+ G + +A   F+ L +  +E T     T+
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT---IYTY 299

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           NI+I   CK GKV +   L   +   G   PD+++Y +++ G C  G  +EA    ++M 
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMK 358

Query: 544 NEGICPNFATWNVLVRS 560
            +G  PN   +N L+R+
Sbjct: 359 EDGTLPNSGCYNTLIRA 375



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 203/397 (51%), Gaps = 5/397 (1%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G +P++ TY +++  LCK    D A+ LL +M      P  + Y TI+  +CK   +++A
Sbjct: 11  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70

Query: 155 ----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
               +E+  +     V  Y++LI+ LC   +  +A  LL +M++R I+P+V T+S +I +
Sbjct: 71  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
               G +  +  +  +M  R  +P+I +++SL+ G+ +  R  EA  ++  M+ +   P+
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+TLI G C    ++E + V  +M +     N  TY+ LI G  +AG+   A +I+ 
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+S+G  PN++ Y  ++  LC+N    +A  + E +      P   T+N  I+G+C  G
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 310

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +V+    L   +      P++  YN ++ G  R    +EA  L  E+++ G   N   YN
Sbjct: 311 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 370

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           T++    R G    + +L+ +M   G   DA T  ++
Sbjct: 371 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 209/419 (49%), Gaps = 6/419 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G       +  V+N   + G  + A  +  ++ +  L+P V IYN I+D L 
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     ++  M+  G+ PNV TY+ L+  LC   R   A +LL +M  +   PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +++ ++ +  K G++ EA +L            +  Y++LING C   +++EA  +   M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V +   P+V+TY+T+I   C    VE  + +  +M  RG   N  ++  L++G    G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +++  M+ +G  PN++ Y+TL+ GLC NG +++A+ V   ++ +   P + TY+ +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  KAG +     ++  +   G  P+VVAY  M+   C+     +A +L ++M  +  
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            PN+  +NT I+     G  + + +L+ +M+      + +T   L+  +L   R+ ++F
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 420



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 180/340 (52%), Gaps = 5/340 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D    L ++M+ +G+  +   + S+I+     G    A ++   + E  
Sbjct: 57  IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  ++ ++DA + E +      +Y  M +  ++P++ TY+ L+   C ++R+D A 
Sbjct: 117 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 176

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
           ++   M +K C PD V+Y T++   CK  +VEE     RE++ R   G +V YN LI GL
Sbjct: 177 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 236

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +    + A  +  EMV  G+ PN++TY+T++  LC  G +E ++ +   +      P I
Sbjct: 237 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  +++G    G+  +  DL+  +  +G  P+VVAY+T+I G C  GS +EA ++  +
Sbjct: 297 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 356

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           M+E+   PN   Y+ LI    + G+   ++++   M S G
Sbjct: 357 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 396



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 158/305 (51%), Gaps = 1/305 (0%)

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L +RM+ +G  P++V Y  +++GLC  G  D A ++  +ME+    P V  Y+ +IDG  
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K  ++  A  ++  M + G  PNVV Y+ ++  LC    +  A  L+  M      P+  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           TF+  I      G++  A KL D+M +    P+I TY+ L++G    +R+ EA ++   +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
                  ++VTYNT++ G C+   V E  ++  +M   G   + +T+NI+I    + G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A ++   +   G   P+I++Y +LL G+C +G +++A +  + +    + P   T+N+
Sbjct: 243 DMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 557 LVRSL 561
           ++  +
Sbjct: 302 MIEGM 306



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 141/270 (52%), Gaps = 1/270 (0%)

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M    C P++ TY  +++G  K G+   A  + N+M      P V+ Y  ++  LC+  
Sbjct: 6   RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A +L ++M  +   PN VT+++ I  LC  GR   A +LL  M + +  P++ T++
Sbjct: 66  HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 125

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D  ++  ++ EA +L  E+ K  I  +IVTY+++++G C    + EA Q+   M+ +
Sbjct: 126 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 185

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               D +T+N +I  +CK  +V   +++   +   G    + ++Y  L+ G+  +G    
Sbjct: 186 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG-LVGNTVTYNILIQGLFQAGDCDM 244

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           A    ++M+++G+ PN  T+N L+  L  N
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 123/235 (52%), Gaps = 1/235 (0%)

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           +RM++ GC P++V Y  +V  LC+      A +L+ KM      P  + +NT I GLC  
Sbjct: 5   DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
             +D A+ L  +M+     PN+ TY+ L+  L    R  +A  L++++ +  I  ++ T+
Sbjct: 65  KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           + ++    + G +VEA +L  +M+        +T++ +I  +C   +++ A Q+ + +  
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              + PD+++Y +L+ G C    ++E     ++M   G+  N  T+N+L++ LF 
Sbjct: 185 KHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 240/439 (54%), Gaps = 5/439 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +  IL +L+  N +S++  ++  M+ +G+  N+ T +IL+    +      ++ +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
              +  KG  PDA++ TT++  +C  G + +A     + LA+ F      Y  LINGLCK
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             + + A  +L  +  + +  +V+ Y+TII  +C    V  +     +M  +   P + +
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +L+ G  + G+  +A  L ++MI E   P V  +S L+   C  G + EA +V   M 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    PN+ TY++L++G+     +  A  I+N M   G +P+V +Y+ M+   C+  M  
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  L E+M  +   P+ VT+N+ I GLC  GR+ +A+KL+ +M      PNI TYN LL
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLL 426

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L + + V +A EL+T+++   IQ ++ TYN +++G+C++G + +A ++   +L+ G  
Sbjct: 427 DALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYN 486

Query: 478 LDAITFNIIIYAYCKQGKV 496
           +D  T+N +I  +CK+G V
Sbjct: 487 IDVYTYNTMIKGFCKKGFV 505



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 221/395 (55%), Gaps = 7/395 (1%)

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           L  N  S    ++SN+ + G EP+  T   L+K LC    +  A     ++   G   + 
Sbjct: 117 LGHNSLSF--SVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQ 174

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCE 190
           VSY T+++ +CK+GQ + A E+  R         V +YN +I+G+CK+  + +AF    E
Sbjct: 175 VSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV + I P V+TY+T+I  LC +G ++ ++G+L +M +   NP +++F+ L+  +   G+
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +++  M+++   PN+V Y++L++G C    +++A S+   M +    P+V +YS 
Sbjct: 295 VKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSI 354

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I GF K   +  A +++  M      P+VV Y  ++  LC++     A  LI +M    
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
            PPN +T+N+ +  LC    VD A++LL ++K +   P++ TYN L++GL +  R+K+A 
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQ 474

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           ++  ++   G  +++ TYNT++ G C+ G V+  F
Sbjct: 475 KVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 199/394 (50%), Gaps = 1/394 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +  ++  L K +       L  +M   GI  N++T S +I+    +G+   S  +   + 
Sbjct: 72  FGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNIL 131

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +G  P+  + T+L+KG  L G  H+A    ++++  GF  N V+Y TLI+GLC  G   
Sbjct: 132 KKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTK 191

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+ +  +++      +V  Y+ +IDG  K   +  A   ++ M++    P VV Y  ++
Sbjct: 192 AALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLI 251

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC       A  L+ KM  EN  P   TF+  +   C  G+V  A  +   M + +  
Sbjct: 252 CGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVK 311

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PNI TYN L++G   VN V +A  +   + + G+  ++ +Y+ ++ G C+  MV EA +L
Sbjct: 312 PNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKL 371

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M  +    D +T+N +I   CK G+++ A++L+  +   G+  P+II+Y SLL  +C
Sbjct: 372 FEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQP-PNIITYNSLLDALC 430

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +  + +A   L K+ +  I P+  T+N+L+  L
Sbjct: 431 KNHHVDKAIELLTKLKDHNIQPSVCTYNILINGL 464



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 224/452 (49%), Gaps = 7/452 (1%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQ----VEEARELAMR-FGSGVSVYNALINGLCKEHK 180
           +  K   P  + +  I+ S+ K       V   R++      S +   + LIN   +   
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
              +F +   ++ +G +P+ IT +T+I  LC  G++  +L    ++   G   N  S+ +
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G+T  A ++  R+  +    +VV Y+T+I G+C +  +++A     +M    
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P V TY+ LI G    G L  A  + ++MI    +P V  ++ +V   C+     +A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           ++   M  ++  PN VT+N+ + G C    V+ A  + + M Q    P++ +Y+ ++ G 
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGF 359

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            ++  V EA +L  E+    I  ++VTYN+++ G+C++G +  A +L+G+M   G   + 
Sbjct: 360 CKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNI 419

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+N ++ A CK   V+ AI+LL +++      P + +Y  L+ G+C SG +++A    +
Sbjct: 420 ITYNSLLDALCKNHHVDKAIELLTKLKDHN-IQPSVCTYNILINGLCKSGRLKDAQKVFE 478

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            +L  G   +  T+N +++  F   G + P +
Sbjct: 479 DVLVNGYNIDVYTYNTMIKG-FCKKGFVIPQF 509



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 185/357 (51%), Gaps = 5/357 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  K +I    +   ++   G   ++  + ++IN   +VG  + AL+M  RI    
Sbjct: 145 LIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKL 204

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++  V +YN I+D +  +   +     YS M    + P V TYN L+  LC   ++  A 
Sbjct: 205 VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAI 264

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
            LL +M  +   P   +++ +V + CK G+V+EA+      +       +  YN+L+NG 
Sbjct: 265 GLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGY 324

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C  +++ +A  +   M   G+ P+V +YS +IS  C +  V+ ++ +  +M  +   P++
Sbjct: 325 CLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDV 384

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ G    GR   A  L   M   G  PN++ Y++L+  LC N  +D+A+ +  +
Sbjct: 385 VTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTK 444

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
           +++++  P+V TY+ LI+G  K+G L  A +++  ++ NG + +V  Y  M+K  C+
Sbjct: 445 LKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 133/247 (53%), Gaps = 5/247 (2%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           +G  + A+ + +++    + PTV  ++ ++DA   E +      ++  M +  ++PN+ T
Sbjct: 257 MGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVT 316

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           YN L+   C  N V+ A  +   M   G APD  SY+ ++S  CK+  V+EA +L     
Sbjct: 317 YNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMH 376

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
             +    V  YN+LI+GLCK  +I  A  L+ EM DRG  PN+ITY++++ +LC   +V+
Sbjct: 377 CKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVD 436

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ +L ++      P++ ++  L+ G    GR  +A  ++  ++  G+  +V  Y+T+I
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496

Query: 278 HGLCSNG 284
            G C  G
Sbjct: 497 KGFCKKG 503



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 131/238 (55%), Gaps = 5/238 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M +E ++ +   F  +++++ + G  ++A  +F  + +  +KP +  YN +++   
Sbjct: 266 LLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYC 325

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N  +    I++ M + G+ P+V +Y+I++   CK   VD A KL  EM  K   PD V
Sbjct: 326 LVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVV 385

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +CK G++  A +L            +  YN+L++ LCK H +++A  LL ++
Sbjct: 386 TYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKL 445

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            D  I P+V TY+ +I+ LC  G ++ +  +   + V G N +++++ +++KG+   G
Sbjct: 446 KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 137/271 (50%), Gaps = 7/271 (2%)

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S ++ + + +  P++  +  ++    KA +      +  +M  NG + N+V  + ++   
Sbjct: 55  SFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCF 114

Query: 351 CQ---NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
            Q   N++     S I K  +E   P+ +T  T IKGLC  G +  A+   D++      
Sbjct: 115 SQLGHNSLSFSVFSNILKKGYE---PDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQ 171

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            N  +Y  L++GL +V + K A E++  I+   ++L++V YNTI+ GVC+  +V +AF  
Sbjct: 172 LNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDF 231

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M+ +      +T+N +I   C  G++ +AI LL ++      NP + +++ L+   C
Sbjct: 232 YSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN-INPTVYTFSILVDAFC 290

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             G ++EA      M+ + + PN  T+N L+
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVTYNSLM 321



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 5/182 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + +   M   GV+     +  +I+ + ++ + ++A+K+F  +    + P V  YN
Sbjct: 329 EVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYN 388

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M   G  PN+ TYN LL ALCKN+ VD A +LL ++ + 
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDH 448

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
              P   +Y  +++ +CK G++++A++     L   +   V  YN +I G CK+  +   
Sbjct: 449 NIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQ 508

Query: 185 FW 186
           FW
Sbjct: 509 FW 510



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/116 (19%), Positives = 59/116 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I     L+ +M   G   +   + S++++  +    ++A+++  ++++  
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           ++P+V  YN +++ L    R      ++ ++  +G   +V+TYN ++K  CK   V
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 269/528 (50%), Gaps = 15/528 (2%)

Query: 49  ALKMFYRI--REFGLK---PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           AL +F R+   E G +   PT   YN ++D      R  +   ++  + R G++ +  T 
Sbjct: 136 ALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITA 195

Query: 104 NILLKALCKNNRVDGAYKLLV-EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----A 158
           N LLK LC  NR + A  +L+  M   GC P+AVSY+ ++ ++C     + A +L    A
Sbjct: 196 NTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMA 255

Query: 159 MRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            + G+    V  Y+ +I+G   E +  +A  L  EM  +G+ P+V+TY+ II +LC    
Sbjct: 256 KQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ +  +L QM   G  P+  +++ ++ GY   GR  EA+ ++  M + G +PN+V  ++
Sbjct: 316 MDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNS 375

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            +  LC +G   EA      M      P++ +Y  L+ G+A  G       ++N M SNG
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            + N   +T ++    +  M   A  +  +M  +   P+ VT++T I      GR+  AM
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAM 495

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHG 454
           +  +QM      PN   Y+ ++ G      + +A ELV+E+   GI + +IV ++++++ 
Sbjct: 496 EKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINS 555

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ G V++A  +       G +   ITFN +I  YC  GK++ A ++LD +   G   P
Sbjct: 556 LCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVG-VEP 614

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           DI++Y +LL G   +G + +     ++M  +G+ PN  T+ +++  LF
Sbjct: 615 DIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662



 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 268/566 (47%), Gaps = 47/566 (8%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R    +  L +F  I   GLK      N +L  L   NR    +N +   M   G  PN 
Sbjct: 169 RARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNA 228

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEAREL- 157
            +Y+I+LKALC N+    A  LL  M  +G  C+PD V+Y+T++      G+  +A  L 
Sbjct: 229 VSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLF 288

Query: 158 --AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
               R G    V  YN +I+ LCK   +++A  +L +M   G  P+ +TYS +I     +
Sbjct: 289 HEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATL 348

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G ++ +  +  +M  RG  PNI +  S L      GR+ EA++ ++ M  +G  P++ +Y
Sbjct: 349 GRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSY 408

Query: 274 STLIHGLCSNGS-----------------------------------MDEAVSVSYQMEE 298
            TL+HG  S G                                    +D+A+ +  +M++
Sbjct: 409 CTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQ 468

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P+V TYS +I  F++ G L  A + +N+M++ G  PN   Y+ +++  C +    +
Sbjct: 469 QGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVK 528

Query: 359 AHSLIEKMAFENCP-PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           A  L+ +M  +  P P+ V F++ I  LC  GRV  A  + D        P + T+N L+
Sbjct: 529 AKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLI 588

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DG   V ++ +AF+++  +E  G++ +IVTYNT+L G  + G + +   L  +M  +G K
Sbjct: 589 DGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVK 648

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            + +T+ I++    + G+   A +   + I  G      I  Y  +L G+C +    EA 
Sbjct: 649 PNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSI--YGIILGGLCRNNCADEAI 706

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLF 562
           I  QK+    +  +    N ++ +++
Sbjct: 707 ILFQKLGTMNVKFSITILNTMINAMY 732



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 263/594 (44%), Gaps = 44/594 (7%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG--LKPTVKIYN 69
           + V  LL +M   G   +   +  V+ +     ++++AL +   + + G    P V  Y+
Sbjct: 210 EAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYS 269

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E        ++  M R G++P+V TYN+++ ALCK   +D A  +L +M   
Sbjct: 270 TVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTD 329

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  PD V+Y+ ++     LG+++EA    RE+  R     +   N+ +  LCK  + +EA
Sbjct: 330 GAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEA 389

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                 M  +G  P++ +Y T++      G     +G+   M   G   N H FT L+  
Sbjct: 390 AEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +A  ++  M ++G  P+VV YST+I      G + +A+    QM      PN
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCS-PNVVAYTCMVKVLCQNNMFHQAHSLI 363
              YS++I GF   G L+ A ++ + MI+ G   P++V ++ ++  LC++     AH + 
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           +        P  +TFN+ I G C  G++D A K+LD M+     P+I TYN LLDG  + 
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKN 629

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNT--------------------------------- 450
            R+ +   L  E+++ G++ N VTY                                   
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 451 --ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             IL G+CR     EA  L  K+     K      N +I A  K  +   A +L   I  
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            G   P+  +Y  ++  +   GG+++A      M   GI P     N ++R L 
Sbjct: 750 SGLL-PNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLL 802



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 262/544 (48%), Gaps = 41/544 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM  +G       +  +I+ Y  +G  ++A KMF  +++ G
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRG 365

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY----------------- 103
           L P +   N  L +L    R       + +M   G +P++F+Y                 
Sbjct: 366 LIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMI 425

Query: 104 ------------------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                              IL+ A  K   VD A  +  EM  +G +PD V+Y+T++S+ 
Sbjct: 426 GLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTF 485

Query: 146 CKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID-PN 199
            ++G++ +A E     +A       +VY+++I G C    + +A  L+ EM+++GI  P+
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           ++ +S++I+SLC  G V  +  I       G  P + +F SL+ GY L G+  +A  + +
Sbjct: 546 IVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILD 605

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M   G  P++V Y+TL+ G   NG +++ +++  +M+     PN  TY  ++ G  +AG
Sbjct: 606 AMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             + A + ++ MI +G +  V  Y  ++  LC+NN   +A  L +K+   N   +    N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I  +    R + A +L   +     LPN +TY  ++  LL+   V++A  + + +EK 
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKS 785

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI       N I+  +   G + +A   L K+  +   L+A T ++++  + ++GK    
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQED 845

Query: 500 IQLL 503
           I+LL
Sbjct: 846 IKLL 849



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 239/506 (47%), Gaps = 70/506 (13%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P   TYNIL+   C+  R D    L       GC         I+ +  K+ Q+      
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALF------GC---------ILRTGLKMDQI------ 193

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAF-WLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      N L+  LC  ++ EEA   LL  M + G  PN ++YS ++ +LCD    
Sbjct: 194 ---------TANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMS 244

Query: 217 ETSLGILGQMFVRG--CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           + +L +L  M  +G  C+P++ ++++++ G+   G T +A  L++ M R+G  P+VV Y+
Sbjct: 245 QRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYN 304

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            +I  LC   +MD+A  V  QM  +   P+  TYS +I G+A  G L  A++++  M   
Sbjct: 305 LIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKR 364

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC--GC---- 388
           G  PN+V     +  LC++    +A    + M  +   P+  ++ T + G    GC    
Sbjct: 365 GLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADM 424

Query: 389 -----------------------------GRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
                                        G VD AM +  +M+Q    P++ TY+ ++  
Sbjct: 425 IGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIST 484

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG-TKL 478
             R+ R+ +A E   ++   GIQ N   Y++I+ G C  G +V+A +L+ +M+ +G  + 
Sbjct: 485 FSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D + F+ +I + CK G+V +A  + D     GE  P +I++ SL+ G C  G M +AF  
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGE-RPGVITFNSLIDGYCLVGKMDKAFKI 603

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSN 564
           L  M   G+ P+  T+N L+   F N
Sbjct: 604 LDAMEVVGVEPDIVTYNTLLDGYFKN 629



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 240/570 (42%), Gaps = 78/570 (13%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LLQ M  +G +CS  V  + +VI+ +   G   +A  +F+ +   G+KP V  YN I+DA
Sbjct: 250 LLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           +   M  DG +P+  TY+ ++       R+  A K+  EM  +G  P+
Sbjct: 310 LCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPN 369

Query: 135 AVSYTTIVSSICKLGQVEEAREL------------------------------------- 157
            V+  + ++S+CK G+ +EA E                                      
Sbjct: 370 IVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFN 429

Query: 158 AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +M+     +   V+  LI+   K   +++A  +  EM  +G+ P+V+TYST+IS+   +G
Sbjct: 430 SMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMG 489

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-------- 266
            +  ++    QM  RG  PN   ++S+++G+ + G   +A +L + MI +G         
Sbjct: 490 RLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFF 549

Query: 267 ----------------------------LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                                        P V+ +++LI G C  G MD+A  +   ME 
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P++ TY+ L+DG+ K G +     ++  M   G  PN V Y  M+  L +      
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A     +M           +   + GLC     D A+ L  ++       +IT  N +++
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMIN 729

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            + +V R +EA EL   I   G+  N  TY  ++  + + G V +A  +   M   G   
Sbjct: 730 AMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVP 789

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
            +   N II    ++G++  A   L ++ G
Sbjct: 790 GSRLLNRIIRMLLEKGEIAKAGNYLSKVDG 819


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 158/572 (27%), Positives = 269/572 (47%), Gaps = 42/572 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I  Y R G+ + +L++F  +  +G  P+V   N IL +++       +      M
Sbjct: 125 VFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEM 184

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            +  + P+V T+NIL+  LC       +  L+ +M   G AP  V+Y T++   CK G+ 
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 152 EEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A EL          + V  YN LI+ LC+ ++  + + LL +M  R I PN +TY+T+
Sbjct: 245 KAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN------- 259
           ++   + G V  +  +L +M   G +PN  +F +L+ G++  G   EA  +++       
Sbjct: 305 LNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGL 364

Query: 260 ----------------------------RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
                                       RM R G     + Y+ +I GLC NG +DEAV 
Sbjct: 365 IGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 424

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M ++   P++ TYSALI+GF + G L  A +I  R+   G SPN + Y+ ++   C
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +   + E M  E   P+  TFN  +  LC  G+V  A + +  M     LPN  
Sbjct: 485 RMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAV 544

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +++ L++G        +AF +  E+ K G      TY ++L G+C+ G ++ A + L  +
Sbjct: 545 SFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSL 604

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
                 +D +  N +I A CK G ++ A+ L   +       PD  +YTSL+ G+C  G 
Sbjct: 605 QNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSIL-PDSFTYTSLISGLCRKGK 663

Query: 532 MQEAFIYLQKMLNEG-ICPNFATWNVLVRSLF 562
              A ++ ++    G + PN   +   V  +F
Sbjct: 664 TVIAILFAKEAEARGNLVPNKVMYTCFVDGMF 695



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 263/580 (45%), Gaps = 6/580 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           + CE   V   L++M    +      F  +IN     G  +++  +  ++ + G  PT+ 
Sbjct: 170 KSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIV 229

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN +L     + RF     +  +M   G+  +V TYN+L+  LC++NR    Y LL +M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKI 181
             +   P+ V+Y T+++     G+V  AR+L    + FG   +   +NALI+G   E   
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +EA  +   M  +G+    ++Y  ++  LC     + + G   +M   G      ++T +
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    G   EA  + N M ++G  P++V YS LI+G C  G +  A  +  ++     
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN   YS LI    + G L    +I+  MI  G +P+   +  +V  LC+     +A  
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            +  M  +   PN V+F+  I G    G    A  + D+M +    P   TY  LL GL 
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +  A + +  ++     ++ V  NT++  +C++G + +A  L G+M+      D+ 
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+  +I   C++GK   AI         G   P+ + YT  + G+  +G  +  F + Q+
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQ 709

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           M   G+  +  T N ++   +S +G +   + L   M N+
Sbjct: 710 MDKLGLTRDVVTTNAMIDG-YSRMGKIEKTHDLLFEMGNQ 748



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 237/478 (49%), Gaps = 13/478 (2%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           P+VF  +IL++   +   +  + ++   MG  G  P   +   I+ SI K    E+    
Sbjct: 123 PSVF--DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVK--SCEDVSVW 178

Query: 155 ----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                 L  +    V+ +N LIN LC E   +++ +L+ +M   G  P ++TY+T++   
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  + ++ +L  M ++G N ++ ++  L+       R+ +   L   M +    PN 
Sbjct: 239 CKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+TL++G  + G +  A  +  +M      PN  T++ALIDG    GN   A ++++ 
Sbjct: 299 VTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHM 358

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M + G     V+Y  ++  LC+N  F  A     +M         +T+   I GLC  G 
Sbjct: 359 MEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A+ +L++M +    P+I TY+ L++G  RV R+K A E+V  I + G+  N + Y+T
Sbjct: 419 LDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++  CR G + E  ++   M++EG   D  TFN+++ + CK GKV  A + +  +   G
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
              P+ +S+  L+ G  +SG   +AF    +M   G  P F T+  L++ L    GHL
Sbjct: 539 IL-PNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG-GHL 594



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 154/656 (23%), Positives = 280/656 (42%), Gaps = 78/656 (11%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI+ L +   +D    +L +M  +G+      + ++IN + RVG  + A ++  RI   G
Sbjct: 409  MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            L P   IY+ ++              IY  M  +G  P+ FT+N+L+ +LCK  +V  A 
Sbjct: 469  LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE 528

Query: 121  KLLVEMGNKGCAPDAVS-----------------------------------YTTIVSSI 145
            + +  M + G  P+AVS                                   Y +++  +
Sbjct: 529  EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588

Query: 146  CKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK G +  A +               + N LI  +CK   +++A  L  EMV R I P+ 
Sbjct: 589  CKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDS 648

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY+++IS LC  G    ++    +   RG   PN   +T  + G    G+         
Sbjct: 649  FTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQ 708

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +M + G   +VV  + +I G    G +++   + ++M   +  PN+TTY+ L+ G++K  
Sbjct: 709  QMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRK 768

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            ++  +  ++  MI +G  P+ +    ++  +C++NM      +++         +  TFN
Sbjct: 769  HVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFN 828

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I   C  G ++WA  +++ M       +  T + ++  L R +R +E+  ++ E+ K 
Sbjct: 829  MLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML---------IEGTKLDAI--------- 481
            GI      Y  +L+G+CR G +  AF +  +M+          E   + A+         
Sbjct: 889  GISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 482  -----------------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
                             +F  +++ +CK G V  A++L   +   G    D++SY  L+ 
Sbjct: 949  SLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCG-LKLDLVSYNVLIT 1007

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYILDDIMA 579
            G+C  G M  AF   ++M  +G   N  T+  LV  + S      G   IL D++A
Sbjct: 1008 GLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLA 1063



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/596 (23%), Positives = 252/596 (42%), Gaps = 65/596 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  E D  +    +MK  GV      +  +I+   + G  ++A+ M   + + G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDG 433

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  Y+ +++      R      I   + R G+ PN   Y+ L+   C+   +    
Sbjct: 434 IDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETI 493

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++   M  +G  PD  ++  +V+S+CK G+V EA E                        
Sbjct: 494 RIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE------------------------ 529

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                ++ C M   GI PN +++  +I+     G    +  +  +M   G +P   ++ S
Sbjct: 530 -----FMRC-MTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LLKG   GG    A      +       + V  +TLI  +C +G++D+AVS+  +M + S
Sbjct: 584 LLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRS 643

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQA 359
             P+  TY++LI G  + G  + A        + G   PN V YTC V  + +   +   
Sbjct: 644 ILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAG 703

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
               ++M       + VT N  I G    G+++    LL +M      PN+TTYN LL G
Sbjct: 704 FYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHG 763

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             +   V  +F L   +   GI  + +T  +I+ G+C + M+    ++L   +  G ++D
Sbjct: 764 YSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVD 823

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----------------------------- 510
             TFN++I   C  G++N A  +++ +   G                             
Sbjct: 824 RHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLH 883

Query: 511 -----EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                  +P+   Y  LL G+C  G ++ AF+  ++M+   ICP     + +VR+L
Sbjct: 884 EMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 108/476 (22%), Positives = 209/476 (43%), Gaps = 9/476 (1%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK-- 92
            ++I +  + G  ++A+ +F  + +  + P    Y  ++  L  + + ++I  +++     
Sbjct: 618  TLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGK-TVIAILFAKEAEA 676

Query: 93   RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
            R  + PN   Y   +  + K  +    +    +M   G   D V+   ++    ++G++E
Sbjct: 677  RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 153  EARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            +  +L    G+      ++ YN L++G  K   +  +F L   M+  GI P+ +T  +II
Sbjct: 737  KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796

Query: 208  SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              +C+   +E  L IL     RG   + H+F  L+      G  + A D+ N M   G  
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGIS 856

Query: 268  PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
             +      ++  L  N    E+  V ++M +    P    Y  L++G  + G++  A  +
Sbjct: 857  LDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVV 916

Query: 328  WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
               MI++   P  VA + MV+ L +     +A  L+  M      P   +F T +   C 
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCK 976

Query: 388  CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             G V  A++L   M       ++ +YN L+ GL     +  AFEL  E+++ G   N+ T
Sbjct: 977  NGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTT 1036

Query: 448  YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            Y  ++ G+   G       ++ K L+    + A++FN +I  + +Q  VN  ++ L
Sbjct: 1037 YKALVGGILSQGTEFSGTDIILKDLLARGFITAMSFNHMI-NFPQQISVNAYLKHL 1091



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 160/340 (47%), Gaps = 2/340 (0%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           R CN N   F  L++ YL  G   ++ +++  M   GF P+V   + ++  +  +     
Sbjct: 117 RLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVS 176

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             S   +M +    P+V T++ LI+     G+   +S +  +M  +G +P +V Y  ++ 
Sbjct: 177 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C+   F  A  L++ M  +    +  T+N  I  LC   R      LL  M++    P
Sbjct: 237 WYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHP 296

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  TYN LL+G     +V  A +L+ E+   G+  N VT+N ++ G    G   EA ++ 
Sbjct: 297 NEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M  +G     +++ +++   CK  + + A     R++  G      I+YT ++ G+C 
Sbjct: 357 HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC-VGRITYTGMIDGLCK 415

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           +G + EA + L +M  +GI P+  T++ L+   F  +G L
Sbjct: 416 NGFLDEAVVMLNEMSKDGIDPDIVTYSALING-FCRVGRL 454


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 272/533 (51%), Gaps = 6/533 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  +      P++  ++    A+    +F+++      ++ +G+  N++T NI+
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           +   C+  +   AY +L ++   G  PD  ++ T++  +   G+V EA  L  R      
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN+++NG+C+      A  LL +M +R +  +V TYSTII SLC  G ++ ++ 
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G   ++ ++ SL++G    G+ ++ + L   M+    +PNV+ ++ L+    
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 299

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  +  +M      PN+ TY+ L+DG+     L  A+ + + M+ N CSP++V
Sbjct: 300 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 359

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +T ++K  C          +   ++      N VT++  ++G C  G++  A +L  +M
Sbjct: 360 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 419

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             +  LP++ TY  LLDGL    ++++A E+  +++K  + L IV Y TI+ G+C+ G V
Sbjct: 420 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 479

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A+ L   +  +G K + +T+ ++I   CK+G ++ A  LL ++   G   P+  +Y +
Sbjct: 480 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNT 538

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           L+      G +  +   +++M + G   + ++  +++  L S +  L   Y L
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 591



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 244/474 (51%), Gaps = 5/474 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +Q+++ G++ +      +IN + R      A  +  ++ + G +P    +N ++  L  E
Sbjct: 102 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 161

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            + S    +   M  +G +P+V TYN ++  +C++     A  LL +M  +    D  +Y
Sbjct: 162 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 221

Query: 139 TTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +TI+ S+C+ G ++ A    +E+  +   S V  YN+L+ GLCK  K  +   LL +MV 
Sbjct: 222 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 281

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I PNVIT++ ++      G ++ +  +  +M  RG +PNI ++ +L+ GY +  R  E
Sbjct: 282 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 341

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+++ + M+R    P++V +++LI G C    +D+ + V   + +     N  TYS L+ 
Sbjct: 342 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 401

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF ++G +  A +++  M+S+G  P+V+ Y  ++  LC N    +A  + E +       
Sbjct: 402 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 461

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
             V + T I+G+C  G+V+ A  L   +      PN+ TY  ++ GL +   + EA  L+
Sbjct: 462 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            ++E+ G   N  TYNT++    R G +  + +L+ +M   G   DA +  ++I
Sbjct: 522 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 208/402 (51%), Gaps = 1/402 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  EM+     P+++ +S   S++         L    Q+ + G   NI++  
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +T  A  +  ++++ G+ P+   ++TLI GL   G + EAV +  +M EN
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C P+V TY+++++G  ++G+   A  +  +M       +V  Y+ ++  LC++     A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL ++M  +    + VT+N+ ++GLC  G+ +    LL  M   E +PN+ T+N LLD 
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            ++  +++EA EL  E+   GI  NI+TYNT++ G C    + EA  +L  M+      D
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TF  +I  YC   +V++ +++   I   G    + ++Y+ L+ G C SG ++ A    
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRG-LVANAVTYSILVQGFCQSGKIKLAEELF 416

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           Q+M++ G+ P+  T+ +L+  L  N      + I +D+  +K
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 458



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 211/410 (51%), Gaps = 5/410 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G       + S++N   R G    AL +  ++ E  +K  V  Y+ I+D+L 
Sbjct: 170 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 229

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++  M+  G++ +V TYN L++ LCK  + +    LL +M ++   P+ +
Sbjct: 230 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 289

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++    K G+++EA EL       G+S     YN L++G C ++++ EA  +L  M
Sbjct: 290 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 349

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V     P+++T++++I   C V  V+  + +   +  RG   N  +++ L++G+   G+ 
Sbjct: 350 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 409

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+  M+  G LP+V+ Y  L+ GLC NG +++A+ +   ++++     +  Y+ +
Sbjct: 410 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 469

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  K G +  A  ++  +   G  PNV+ YT M+  LC+     +A+ L+ KM  +  
Sbjct: 470 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 529

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            PN  T+NT I+     G +  + KL+++MK      + ++   ++D LL
Sbjct: 530 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 579



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 245/534 (45%), Gaps = 31/534 (5%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L ++M+ +G+  S   + S++    + G       +   +    + P V  +N 
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +LD  + E +    N +Y  M   G+ PN+ TYN L+   C  NR+  A  +L  M    
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
           C+PD V++T+++   C + +V++     R ++ R   +    Y+ L+ G C+  KI+ A 
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EMV  G+ P+V+TY  ++  LCD G +E +L I   +     +  I  +T++++G 
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             GG+  +A +L+  +  +G  PNV+ Y+ +I GLC  GS+ EA  +  +MEE+   PN 
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 533

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL-----------CQNN 354
            TY+ LI    + G+L  ++++   M S G S +  +   ++ +L           C + 
Sbjct: 534 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSK 593

Query: 355 MFHQAHSLIEKMAFENCPPNTVTF------NTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
                  L+E    E    +++TF      NT    L         M   +  +    L 
Sbjct: 594 GSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLR 653

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG--------- 459
             +   +  +  +RV    E      E  +C + +++      +H   RAG         
Sbjct: 654 RSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKM 713

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            VV A +L  +M+  G   + IT++ +I  +CK+ +++ A Q+LD +   G+ +
Sbjct: 714 TVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSD 767



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 170/357 (47%), Gaps = 8/357 (2%)

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHS-------FTSLLKGYLLGGRTHEASDLWNRMI 262
           L   G++ T L      F   C  +  S       F   L+  ++  +  +A  L+  MI
Sbjct: 11  LLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMI 70

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R   LP++V +S     +      +  +    Q+E N    N+ T + +I+ F +     
Sbjct: 71  RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTC 130

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  +  +++  G  P+   +  ++K L       +A  L+++M    C P+ VT+N+ +
Sbjct: 131 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 190

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            G+C  G    A+ LL +M++     ++ TY+ ++D L R   +  A  L  E+E  GI+
Sbjct: 191 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 250

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            ++VTYN+++ G+C+AG   +   LL  M+      + ITFN+++  + K+GK+  A +L
Sbjct: 251 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 310

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              +   G  +P+II+Y +L+ G C    + EA   L  M+     P+  T+  L++
Sbjct: 311 YKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 366



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 12/131 (9%)

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM+ RGI PN ITYS++I   C    ++ +  +L  M  +G + +I     LL G +   
Sbjct: 724 EMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG-DSDIR---YLLAGLMRKK 779

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHG--LCSNGSMDEAVSVSYQMEENSCPPNVTT 307
           R    ++ W        LP+ ++ ST        S+ S++    +  + +E     +V +
Sbjct: 780 RKGSETEGWEN------LPDDLSCSTASRSSNFRSHFSLEGYARLKKRCKETEAVESVGS 833

Query: 308 YSALIDGFAKA 318
           +   I G A A
Sbjct: 834 FKRRIAGVATA 844


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 154/517 (29%), Positives = 261/517 (50%), Gaps = 9/517 (1%)

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+  +   +    + + + M + G   NV+ YNILLK LC+N     A  LL EM    
Sbjct: 113 LLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNS 172

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAF 185
             PD VSY T++   C+  ++E+A +LA    GSG S     +  LI+  CK  K++EA 
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM  +G++ ++I Y+++I   CD G ++    +  ++  RG +P   ++ +L++G+
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  EAS+++  M+  G  PNV  Y+ LI GLC  G   EA+ +   M +    PNV
Sbjct: 293 CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNV 352

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ +I+   K   +  A +I   M      P+ + Y  ++  LC      +A  L+  
Sbjct: 353 VTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYL 412

Query: 366 MAFEN--CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           M  ++    P+ ++FN  I GLC   R+  A+ + D + +     +I T N LL+  L+ 
Sbjct: 413 MLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKS 472

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             V +A EL  +I    I  N  TY T++ G C+ GM+  A  LL KM +         +
Sbjct: 473 GDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDY 532

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N ++ + CK+G ++ A +L + ++    + PD+IS+  ++ G   +G ++ A   L  M 
Sbjct: 533 NCLLSSLCKKGTLDQAWRLFEEMQRDDSF-PDVISFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           + G+ P+  T++ L+   F  LG+L       D M +
Sbjct: 592 HAGLSPDLFTYSKLINR-FLKLGYLDEAISFFDKMID 627



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 267/517 (51%), Gaps = 11/517 (2%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           R+ G A   L +  + R F     V  YN +L  L     F     +   M+++ + P+V
Sbjct: 121 RKTGFAHGVLALMLK-RGFAF--NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDV 177

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RE 156
            +YN +++  C+   ++ A +L  EM   GC+   V++  ++ + CK G+++EA    +E
Sbjct: 178 VSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKE 237

Query: 157 LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           +  +   + + VY +LI G C   +++    L  E+++RG  P  ITY+T+I   C +G 
Sbjct: 238 MKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGR 297

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ +  I   M  RG  PN++++T L+ G    G+T EA  L N M+++   PNVV Y+ 
Sbjct: 298 LKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNI 357

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +I+ LC +  + +A+ +   M++    P+  TY++L+ G    G+L  AS++   M+ + 
Sbjct: 358 IINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDS 417

Query: 336 --CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               P+V+++  ++  LC+ N  HQA  + + +  +    + VT N  +      G V+ 
Sbjct: 418 SYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNK 477

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM+L  Q+   + +PN  TY  ++DG  +   +  A  L+ ++    +  ++  YN +L 
Sbjct: 478 AMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLS 537

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +C+ G + +A++L  +M  + +  D I+FNI+I    K G + +A  LL  +   G  +
Sbjct: 538 SLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAG-LS 596

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           PD+ +Y+ L+      G + EA  +  KM++ G  P+
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPD 633



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 251/497 (50%), Gaps = 7/497 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+   +      + +VI  +      E+AL++   ++  G   ++  +  ++DA  
Sbjct: 164 LLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFC 223

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +   MK  G+E ++  Y  L++  C    +D    L  E+  +G +P A+
Sbjct: 224 KAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CKLG+++EA E+    M  G    V  Y  LI+GLC   K +EA  LL  M
Sbjct: 284 TYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +  +PNV+TY+ II+ LC    V  +L I+  M  R   P+  ++ SLL G    G  
Sbjct: 344 LQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDL 403

Query: 252 HEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            EAS L   M+++     P+V++++ LIHGLC    + +A+ +   + E     ++ T +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTN 463

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L++   K+G++  A ++W ++ ++   PN   YT M+   C+  M + A  L+ KM   
Sbjct: 464 ILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLS 523

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
             PP+   +N  +  LC  G +D A +L ++M++ +  P++ ++N ++DG L+   +K A
Sbjct: 524 ELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSA 583

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L+  +   G+  ++ TY+ +++   + G + EA     KM+  G + DA   + ++  
Sbjct: 584 ESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKY 643

Query: 490 YCKQGKVNNAIQLLDRI 506
              QG+ +   + + ++
Sbjct: 644 CISQGETDKLTEFVKKL 660



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 202/393 (51%), Gaps = 1/393 (0%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+  L +    E AF    +M++     N ++ S ++     +     + G+L  M  
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG   N++++  LLKG        +A  L   M +   +P+VV+Y+T+I G C    +++
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ ++ +M+ + C  ++ T+  LID F KAG +  A  +   M   G   +++ YT +++
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C      +  +L +++      P  +T+NT I+G C  GR+  A ++ + M +    P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRP 315

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ TY  L+DGL  V + KEA +L+  + +   + N+VTYN I++ +C+  +V +A +++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIV 375

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD-RIRGGGEWNPDIISYTSLLWGIC 527
             M    T+ D IT+N ++   C +G ++ A +LL   ++     +PD+IS+ +L+ G+C
Sbjct: 376 ELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLC 435

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
               + +A      ++ +    +  T N+L+ S
Sbjct: 436 KGNRLHQALDIYDLLVEKLGAGDIVTTNILLNS 468



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 151/290 (52%), Gaps = 1/290 (0%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           A + L+  L  + + + A S   +M E     N  + S L++ F +      A  +   M
Sbjct: 74  AGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALM 133

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  G + NV  Y  ++K LC+N  F +A SL+ +M   +  P+ V++NT I+G C    +
Sbjct: 134 LKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKEL 193

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A++L ++M+   C  ++ T+  L+D   +  ++ EA  L+ E++  G++ +++ Y ++
Sbjct: 194 EKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSL 253

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G C  G +     L  ++L  G    AIT+N +I  +CK G++  A ++ + +   G 
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG- 312

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             P++ +YT L+ G+C  G  +EA   L  ML +   PN  T+N+++  L
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKL 362


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 261/520 (50%), Gaps = 7/520 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSNMKRDGMEPNVFT 102
           G+ ++A K+F ++  +GL  +V   N  +  L  + +   +   ++      G+  N  +
Sbjct: 196 GMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTAS 255

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-- 160
           YNI+  +LC+  RV  A++LL++M  +GC PD +SY+T+++  C++G+++   +L     
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQ 315

Query: 161 ---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                     YN +I  LCK  K+ EA  +L EM+  GI P+ + Y+T+I   C +GNV 
Sbjct: 316 IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
           ++  +  +M  R  +P+  ++T+++ G    GR  EA  L++ M+ +   P+ V Y+ LI
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALI 435

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            G C  G M EA S+  QM +    PN+ TY+AL DG  K G +  A+++ + M   G  
Sbjct: 436 DGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLE 495

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            N+  Y  +V  LC+     QA  L++ M      P+ VT+ T +   C    +  A +L
Sbjct: 496 LNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHEL 555

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L QM   E  P + T+N L++G      +++  +L+  + + GI  N  TYN+++   C 
Sbjct: 556 LRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCI 615

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
              +    ++   M  +G   D  T+NI+I  +CK   +  A   L R   G  +N  + 
Sbjct: 616 RNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA-WFLHRDMVGKGFNLTVS 674

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           SY +L+ G        EA    ++M  EG+  +   +N+ 
Sbjct: 675 SYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 264/522 (50%), Gaps = 13/522 (2%)

Query: 51  KMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKAL 110
           ++ Y  +++G  P  ++++     L+          ++  M   G+  +V + N+ +  L
Sbjct: 170 QLIYTYKDWGSDP--RVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHL 227

Query: 111 CKNNRVDG---AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG----- 162
            ++  +DG   A K+ VE    G   +  SY  I  S+C+LG+V EA +L ++       
Sbjct: 228 SED--LDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCI 285

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V  Y+ +ING C+  +++    L+ EM  +G+ PN  TY+ +I  LC  G V  +  +
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M   G  P+   +T+L+ G+   G    A  L++ M +    P+ + Y+ +I GLC 
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 405

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G + EA  + ++M      P+  TY+ALIDG+ K G +  A  + N+M+  G +PN+V 
Sbjct: 406 TGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT +   LC+      A+ L+ +M  +    N  T+N+ + GLC  G +D A+KL+  M+
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                P+  TY  L+D   +   +  A EL+ ++    +Q  +VT+N +++G C +GM+ 
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +  +LL  ML +G   +A T+N +I  YC +  +    ++   +   G   PD  +Y  L
Sbjct: 586 DGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV-PDGNTYNIL 644

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + G C +  M+EA+   + M+ +G     +++N L++  +  
Sbjct: 645 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 270/528 (51%), Gaps = 25/528 (4%)

Query: 42  RVGLAEQALKMFYR-IREFGLKPTVKI---YNHILDALLAENRFSMINPIYSNMKRDGME 97
           ++  A + LKM  + I++F + P + +   + H ++ L           IY+  K  G +
Sbjct: 134 QIATASKDLKMARKLIQDFWVNPNLDVGVSFGHFVEQL-----------IYT-YKDWGSD 181

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK-LGQVEEARE 156
           P VF  +I  + L +   +D A KL  +M N G      S    +S + + L  ++ A +
Sbjct: 182 PRVF--DIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALK 239

Query: 157 LAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           + + F         + YN + + LC+  ++ EA  LL +M  RG  P+VI+YST+I+  C
Sbjct: 240 VFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYC 299

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            VG ++  L ++ +M ++G  PN +++  ++      G+  EA  +   MI EG  P+ V
Sbjct: 300 QVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV 359

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+TLI G C  G++  A  +  +M++    P+  TY+A+I G  + G ++ A ++++ M
Sbjct: 360 IYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM 419

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +     P+ V YT ++   C+     +A SL  +M      PN VT+     GLC CG V
Sbjct: 420 VCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEV 479

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A +LL +M +     NI TYN L++GL +   + +A +L+ ++E  G   + VTY T+
Sbjct: 480 DTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +   C++  +V A +LL +ML    +   +TFN+++  +C  G + +  +LL  +   G 
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG- 598

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             P+  +Y SL+   C    M+      + M  +G+ P+  T+N+L++
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 646



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 250/503 (49%), Gaps = 8/503 (1%)

Query: 10  EIDGVQYLLQ---QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           ++DG++  L+   +    GV  +   +  + +S  ++G   +A ++  ++   G  P V 
Sbjct: 230 DLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVI 289

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y+ +++          +  +   M+  G++PN +TYN ++  LCK  +V  A ++L EM
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM 349

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKI 181
            ++G APD V YTT++   CKLG V  A  L       +       Y A+I GLC+  ++
Sbjct: 350 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRV 409

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA  L  EMV + ++P+ +TY+ +I   C  G ++ +  +  QM   G  PNI ++T+L
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 469

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
             G    G    A++L + M R+G   N+  Y++L++GLC  G++D+AV +   ME    
Sbjct: 470 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  TY+ L+D + K+  ++ A ++  +M+     P VV +  ++   C + M      
Sbjct: 530 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 589

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L++ M  +   PN  T+N+ IK  C    +    ++   M     +P+  TYN L+ G  
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 649

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +KEA+ L  ++   G  L + +YN ++ G  +    +EA +L  +M  EG   D  
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709

Query: 482 TFNIIIYAYCKQGKVNNAIQLLD 504
            +NI       +GK+   ++L D
Sbjct: 710 IYNIFADINYDEGKMELTLELCD 732



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 220/447 (49%), Gaps = 7/447 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+  V  L+++M+++G+  +   +  VI    + G   +A ++   +   G+ P   IY 
Sbjct: 303 ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYT 362

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D        S    ++  M++  + P+  TY  ++  LC+  RV  A KL  EM  K
Sbjct: 363 TLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 422

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
              PD V+YT ++   CK G+++EA     + L M     +  Y AL +GLCK  +++ A
Sbjct: 423 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 482

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM  +G++ N+ TY+++++ LC  GN++ ++ ++  M V G +P+  ++T+L+  
Sbjct: 483 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y        A +L  +M+     P VV ++ L++G C +G +++   +   M E    PN
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            TTY++LI  +    N+   ++I+  M + G  P+   Y  ++K  C+     +A  L  
Sbjct: 603 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 662

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  +       ++N  IKG     +   A +L +QM++   + +   YN   D      
Sbjct: 663 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEG 722

Query: 425 RVKEAFELVTE-IEKCGIQLNIVTYNT 450
           +++   EL  E IEKC +  +I T NT
Sbjct: 723 KMELTLELCDEAIEKCLVG-DIQTKNT 748


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 234/460 (50%), Gaps = 5/460 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE----LAMRF 161
           LL   CK  + + +   L  + NKG  PD +  T ++        +E+A      L    
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YNA+I+G CK ++IE A  +L  M  RG  P+++TY+ +I SLC+   +  +L 
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L Q+ +  C P + ++T L++  ++ G  +EA  L   M+  G LP++  Y+ +I G+C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G ++ A  +   +    C P+V +Y+ L+  F   G      ++   M S GC PN V
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++  LC+     +A S+++ M  +   P+T +++  I  LC  GR+D A+ ++D M
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               CLP+I  YN +L  L +     +A E+  ++   G   N+ +YNT++  +   G  
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  ++  M+ +G   D IT+N +I   C+ G V  AI LLD +   G + P +ISY  
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG-FRPTVISYNI 492

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L G+C    + +A     +M+ +G  PN  T+ +L+  +
Sbjct: 493 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/431 (32%), Positives = 223/431 (51%), Gaps = 10/431 (2%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KLGQVEE 153
           EP+VF YN ++   CK NR++ A ++L  M  +G  PD V+Y  ++ S+C   KLG   +
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193

Query: 154 ARE--LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             +  L       V  Y  LI     E  I EA  LL EM+ RG+ P++ TY+ II  +C
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G VE +  ++  +  +GC P++ S+  LL+ +L  G+  E   L   M   G  PN V
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            YS LI  LC  G +DEA+SV   M E    P+  +Y  LI    K G L  A  I + M
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           ISNGC P++V Y  ++  LC+N   +QA  +  K+    CPPN  ++NT I  L  CG  
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A+ ++  M      P+  TYN L+  L R   V+EA  L+ ++E+ G +  +++YN +
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 493

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L G+C+   + +A  +  +M+ +G + +  T+ ++I      G    A++L + +     
Sbjct: 494 LLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL----- 548

Query: 512 WNPDIISYTSL 522
           ++ D+IS  S 
Sbjct: 549 FSRDVISQDSF 559



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 213/422 (50%), Gaps = 5/422 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           I E   +P V  YN ++      NR      + + MK  G  P++ TYNI++ +LC   +
Sbjct: 128 ILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 187

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNA 170
           +  A K+L ++    C P  ++YT ++ +    G + EA +     LA      +  YNA
Sbjct: 188 LGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 247

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +I G+CKE  +E A  L+  +  +G  P+VI+Y+ ++ +  + G  +    ++ +MF RG
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN  +++ L+      GR  EA  +   MI +   P+  +Y  LI  LC  G +D A+
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +   M  N C P++  Y+ ++    K GN   A +I+N++   GC PNV +Y  M+  L
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
                  +A  ++  M  +   P+ +T+N+ I  LC  G V+ A+ LLD M+Q    P +
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 487

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            +YN +L GL +V R+ +A  +  E+ + G + N  TY  ++ G+  AG   EA +L   
Sbjct: 488 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANS 547

Query: 471 ML 472
           + 
Sbjct: 548 LF 549



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 207/407 (50%), Gaps = 5/407 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +VI+ + +V   E A ++  R++  G  P +  YN ++ +L    +  +   +   +  D
Sbjct: 142 AVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLD 201

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
              P V TY IL++A      ++ A KLL EM  +G  PD  +Y  I+  +CK G VE A
Sbjct: 202 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERA 261

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            EL     S      V  YN L+     + K +E   L+ EM  RG +PN +TYS +ISS
Sbjct: 262 AELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 321

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G ++ ++ +L  M  +   P+ +S+  L+      GR   A  + + MI  G LP+
Sbjct: 322 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 381

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC NG+ ++A+ +  ++    CPPNV++Y+ +I      G+   A  +  
Sbjct: 382 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 441

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            MIS G  P+ + Y  ++  LC++ +  +A  L++ M      P  +++N  + GLC   
Sbjct: 442 AMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 501

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           R+D A+ +  +M +  C PN TTY  L++G+       EA EL   +
Sbjct: 502 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 184/358 (51%), Gaps = 2/358 (0%)

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +++  C  G    SL  L  +  +G  P++   T L+KG+       +AS +   ++   
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESH 132

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V AY+ +I G C    ++ A  V  +M+     P++ TY+ +I        L  A 
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ ++++ + C P V+ YT +++        ++A  L+E+M      P+  T+N  I+G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G V+ A +L+  +    C P++ +YN LL   L   +  E  +LV E+   G + N 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTY+ ++  +CR G + EA  +L  M+ +    D  +++ +I A CK+G+++ AI ++D 
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDY 372

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           +   G   PDI++Y ++L  +C +G   +A     K+   G  PN +++N ++ +L+S
Sbjct: 373 MISNGCL-PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 171/317 (53%), Gaps = 2/317 (0%)

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G+ +E+      ++ +G+ P+V+  + LI G  +  ++++A  V  ++ E+   P+V  
Sbjct: 81  AGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILESHTEPDVFA 139

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+A+I GF K   +  A+Q+ NRM + G  P++V Y  M+  LC       A  +++++ 
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL 199

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +NC P  +T+   I+     G ++ AMKLL++M     LP++ TYN ++ G+ +   V+
Sbjct: 200 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 259

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A EL+T +   G + ++++YN +L      G   E  +L+ +M   G + + +T++I+I
Sbjct: 260 RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            + C+ G+++ AI +L ++    E  PD  SY  L+  +C  G +  A   +  M++ G 
Sbjct: 320 SSLCRFGRIDEAISVL-KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 548 CPNFATWNVLVRSLFSN 564
            P+   +N ++ +L  N
Sbjct: 379 LPDIVNYNTILAALCKN 395



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 5/328 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+    LL++M   G+      + ++I    + G+ E+A ++   +   G KP V  YN 
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L A L + ++     + + M   G EPN  TY+IL+ +LC+  R+D A  +L  M  K 
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAF 185
             PD  SY  ++S++CK G+++ A  +     S      +  YN ++  LCK     +A 
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +  ++   G  PNV +Y+T+IS+L   G+   +LG++  M  +G +P+  ++ SL+   
Sbjct: 403 EIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCL 462

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   EA  L + M + GF P V++Y+ ++ GLC    +D+A+ +  +M E  C PN 
Sbjct: 463 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNE 522

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMIS 333
           TTY  LI+G   AG    A ++ N + S
Sbjct: 523 TTYILLIEGIGFAGWRTEAMELANSLFS 550



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
           +E    + ++L   T+ D   +N +I  +CK  ++  A Q+L+R++  G + PDI++Y  
Sbjct: 119 IEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARG-FLPDIVTYNI 177

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           ++  +CN   +  A   L ++L +   P   T+ +L+ +     G    + +L++++A
Sbjct: 178 MIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA 235


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 252/486 (51%), Gaps = 43/486 (8%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+ Y R G  + AL++   I    + P    YN +L  L    ++     + + M
Sbjct: 160 TYTALIDGYCRSGRLDDALRL---IASMPVAPDTYTYNTVLKGLCIAKKWEEAEELMAEM 216

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R+   PN  T+   +++ C+N  +D A +LL +M   GC PD V Y+T+++   + G V
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 152 EEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           ++A +L   M        YNA + GLC   + E+   L+ EMV +G  PN  T+S +ISS
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 210 LCDVGNVETSLGILGQMFVRGCNPN-------IHS------------------------- 237
           LC    V++++ +L QM   GC P+       I+S                         
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALG 396

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F ++LKG+    R H+AS+L  +M R+      + ++ LI  LC NG ++ A  V  QM 
Sbjct: 397 FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 456

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C P++ TYS+L++GF++ G +  A Q++  M    C P++ +Y  ++K LC+   + 
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWE 513

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  LI +M  ++CPPN VTFN  I  LC  G VD A+++L+QM  Y   P+I TYN L+
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G     R+ +A +L++ +     + + ++YN+ L G+CRA    +A +L+ +ML     
Sbjct: 574 NGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCT 630

Query: 478 LDAITF 483
            + +TF
Sbjct: 631 PNEVTF 636



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 245/503 (48%), Gaps = 50/503 (9%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ-----VEE 153
           NV TY  L+   C++ R+D A +L+  M     APD  +Y T++  +C   +        
Sbjct: 157 NVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELM 213

Query: 154 ARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           A  +  R       +   I   C+   ++ A  LL +M   G  P+V+ YST+I+   + 
Sbjct: 214 AEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQ 273

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G+V+ +L +L  M    C PN   + + LKG  +  R  +  +L   M+R+G  PN   +
Sbjct: 274 GHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S LI  LC N  +D AV V  QME+  C P+   Y+ +I+  ++ G +  A ++ N M+ 
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV- 389

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             C P+ + +  ++K  C+   +H A  LI +M  ++CP   +TFN  I  LC  G V++
Sbjct: 390 --CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNY 447

Query: 394 AMKLLDQMKQYECLPNITTYNELLDG--------------------------------LL 421
           A ++ +QM +Y C P+I TY+ LL+G                                L 
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLC 507

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R  R ++A EL+ E+       N VT+N +++ +C+ G+V  A ++L +M   G+  D  
Sbjct: 508 RAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIF 567

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N +I  + +QG++++A++LL  +       PD ISY S L G+C +   Q+A   + +
Sbjct: 568 TYNALINGFSEQGRLDDALKLLSTM----SCKPDAISYNSTLKGLCRAERWQDAEELVAE 623

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           ML     PN  T+      L  N
Sbjct: 624 MLRNKCTPNEVTFKYANHLLMPN 646



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 263/527 (49%), Gaps = 81/527 (15%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFG 162
           NIL+K LC   R+  A ++L  +     A DAVS+ T+V+  C+ G++ +A R L     
Sbjct: 94  NILIKKLCATRRLADAERVLDALKAAA-AADAVSHNTLVAGYCRDGRLADAERVLGAARA 152

Query: 163 SG---VSVYNALINGLCKEHKIEEAFWLLCEM-----------VDRGI------------ 196
           +G   V  Y ALI+G C+  ++++A  L+  M           V +G+            
Sbjct: 153 TGAANVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEEAEEL 212

Query: 197 ---------DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
                     PN +T++T I S C  G ++ ++ +L QM   GC P++  +++L+ G+  
Sbjct: 213 MAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSE 272

Query: 248 GGRTHEASDLWN--------------------------------RMIREGFLPNVVAYST 275
            G   +A DL N                                 M+R+G  PN   +S 
Sbjct: 273 QGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSM 332

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI  LC N  +D AV V  QME+  C P+   Y+ +I+  ++ G +  A ++ N M+   
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV--- 389

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C P+ + +  ++K  C+   +H A  LI +M  ++CP   +TFN  I  LC  G V++A 
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYAT 449

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++ +QM +Y C P+I TY+ LL+G      V+ A +L   +     + +I +YN +L G+
Sbjct: 450 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGL 506

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           CRA    +A +L+ +M+ +    + +TFNI+I + C++G V+ AI++L+++   G   PD
Sbjct: 507 CRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGS-TPD 565

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
           I +Y +L+ G    G + +A     K+L+   C P+  ++N  ++ L
Sbjct: 566 IFTYNALINGFSEQGRLDDAL----KLLSTMSCKPDAISYNSTLKGL 608



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 210/418 (50%), Gaps = 12/418 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL QM   G +    ++ ++IN +   G  +QAL +   +     KP    YN 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNA 297

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            L  L    R+  I  + + M R G  PN  T+++L+ +LC+NN VD A ++L +M   G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           C PD V+Y  I++S+ + G+V++A  L  +M        +NA++ G C+  +  +A  L+
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELI 417

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M         +T++ +I  LC  G V  +  +  QM    C P+I +++SLL G+   
Sbjct: 418 AQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQ 477

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G    A  L+  M  +   P++ +Y+ ++ GLC     ++A  +  +M    CPPN  T+
Sbjct: 478 GLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF 534

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LI+   + G +  A ++  +M + G +P++  Y  ++    +      A  L+  M+ 
Sbjct: 535 NILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS- 593

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             C P+ +++N+ +KGLC   R   A +L+ +M + +C PN  T+ +  + LL  NR 
Sbjct: 594 --CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF-KYANHLLMPNRA 648



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 8/310 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L+QM+  G       +  +INS    G  + AL++   +    
Sbjct: 333 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMV 389

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP    +N +L       R+   + + + M RD       T+NIL+  LC+N  V+ A 
Sbjct: 390 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYAT 449

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
           ++  +M    C PD V+Y+++++   + G VE A +L  +M     +  YNA++ GLC+ 
Sbjct: 450 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRA 509

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            + E+A  L+ EMV +   PN +T++ +I+SLC  G V+ ++ +L QM   G  P+I ++
Sbjct: 510 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTY 569

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G+   GR  +A  L + M      P+ ++Y++ + GLC      +A  +  +M  
Sbjct: 570 NALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLR 626

Query: 299 NSCPPNVTTY 308
           N C PN  T+
Sbjct: 627 NKCTPNEVTF 636


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 241/495 (48%), Gaps = 21/495 (4%)

Query: 88  YSNMKRDG---MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           Y+ M R G   + P V TY IL+   C+  R+D  +  L  +  KG   DA+++T ++  
Sbjct: 77  YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 145 ICKLGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAFWLLCEMVDR---G 195
           +C   +  +A ++ +R  +       V  YN L+ GLC E++ +EA  LL  M D    G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 196 IDPNVITYSTIISSLCDVG--------NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             P+V++Y+T+++     G         ++ ++ +L  M   G  P+  ++ S+L GY  
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G+  EA     +M  +G  PNVV YS+L++ LC NG   EA  +   M +    P++ T
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIAT 316

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y  L+ G  K G ++ + ++++ M+  G  P+++ Y  ++   C      +A  L+  M 
Sbjct: 317 YRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 376

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                P+ VT+ T I G C   R+D A+ L  +M      PNI TYN +L GL    R  
Sbjct: 377 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 436

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A EL   I K G QL + TYN ILHG+C+  +  EA ++   + +   +L+  TFNI+I
Sbjct: 437 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 496

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            A  K G+++ A  L       G   PD+ +Y+ +   +   G ++E       M   G 
Sbjct: 497 GALLKCGRMDEAKDLFAAHSANG-LVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 555

Query: 548 CPNFATWNVLVRSLF 562
             +    N +VR L 
Sbjct: 556 SADSRMLNSIVRKLL 570



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 223/475 (46%), Gaps = 17/475 (3%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRDGMEPNV 100
           R G  +        + + G +     +  +L  L A+ R S  ++ +   M   G  P+V
Sbjct: 104 RAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDV 163

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNK---GCAPDAVSYTTIVSSICKLG----QVEE 153
           F+YN LLK LC  NR   A +LL  M +    G  PD VSY T+++   K G       +
Sbjct: 164 FSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQ 223

Query: 154 ARELAMRF-----GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           A + AM        +GV      YN++++G C   + +EA   L +M   G++PNV+TYS
Sbjct: 224 AMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYS 283

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           ++++ LC  G    +  I   M  RG  P+I ++ +LL+G+   GR  E+  L++ M+R 
Sbjct: 284 SLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRI 343

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+++ Y+TLI G C  G MDEA  +   M      P++ TY  LI+G+ +   +  A
Sbjct: 344 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 403

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             ++  M+S+G SPN++ Y  +++ L        A  L   +          T+N  + G
Sbjct: 404 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHG 463

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC     D A+++   +   +      T+N ++  LL+  R+ EA +L       G+  +
Sbjct: 464 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD 523

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           + TY+ +   +   G + E   L   M   G   D+   N I+    ++G +  A
Sbjct: 524 VRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 219/437 (50%), Gaps = 30/437 (6%)

Query: 152 EEAREL---AMRFGSGVSVY---NALINGLCKEHKIEEAFWLLCEMVDRG---IDPNVIT 202
           E+AR +    +R G G S+Y    AL +     H    A      M   G   + P V T
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALAD--VARHSPAAAVSRYNRMARAGAGKVTPTVHT 94

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y+ +I   C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS---CPPNVTTYSALIDGFAKA 318
              G +P+V +Y+ L+ GLC      EA+ + + M ++     PP+V +Y+ +++GF K 
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 319 G--------NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           G         +  A ++ N M+ NG  P+ + Y  ++   C +    +A   ++KM  + 
Sbjct: 215 GIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 274

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN VT+++ +  LC  GR   A K+ D M +    P+I TY  LL G  +  RV E+ 
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESE 334

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L   + + G++ +I+TYNT++ G C AG + EA +LL  M+  G K D +T+  +I  Y
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 394

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN---SGGMQEAFIYLQKMLNEGI 547
           C+  ++++A+ L   +   G  +P+II+Y  +L G+ +   +   +E ++ + K    G 
Sbjct: 395 CRVSRMDDALALFKEMVSSG-VSPNIITYNIILQGLFHTRRTAAAKELYVSITK---SGT 450

Query: 548 CPNFATWNVLVRSLFSN 564
               +T+N+++  L  N
Sbjct: 451 QLELSTYNIILHGLCKN 467



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 233/511 (45%), Gaps = 21/511 (4%)

Query: 49  ALKMFYRIREFG---LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+  + R+   G   + PTV  Y  ++       R  +      N+ + G   +  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 106 LLKALCKNNRVDGAYKL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMR 160
           LLK LC + R   A  + L  M   GC PD  SY  ++  +C   + +EA EL    A  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 161 FGSG----VSVYNALINGLCKE--------HKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
            G G    V  YN ++NG  KE          +++A  +L  MV  G+ P+ +TY++I+ 
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 252

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G  + ++G L +M   G  PN+ +++SL+      GR+ EA  +++ M + G  P
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 312

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           ++  Y TL+ G C  G + E+  +   M      P++ TY+ LIDG   AG +  A+++ 
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M+S G  P++V Y  ++   C+ +    A +L ++M      PN +T+N  ++GL   
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            R   A +L   + +      ++TYN +L GL + N   EA  +   +    +QL   T+
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N ++  + + G + EA  L       G   D  T++++     +QG +     L   +  
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 552

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            G  + D     S++  +   G +  A  YL
Sbjct: 553 NG-CSADSRMLNSIVRKLLQRGDITRAGTYL 582



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 181/373 (48%), Gaps = 13/373 (3%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           G F   I +       ++A+++   + + G+ P    YN IL    +  +          
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+ DG+EPNV TY+ L+  LCKN R   A K+   M  +G  PD  +Y T++   CK G+
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 151 VEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           V E+    +L +R G    +  YN LI+G C   K++EA  LL  MV  G+ P+++TY T
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+  C V  ++ +L +  +M   G +PNI ++  +L+G     RT  A +L+  + + G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT----TYSALIDGFAKAGNL 321
               +  Y+ ++HGLC N   DEA+    +M +N C  ++     T++ +I    K G +
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEAL----RMFQNLCLTDLQLETRTFNIMIGALLKCGRM 505

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  ++    +NG  P+V  Y+ M + L +     +   L   M    C  ++   N+ 
Sbjct: 506 DEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSI 565

Query: 382 IKGLCGCGRVDWA 394
           ++ L   G +  A
Sbjct: 566 VRKLLQRGDITRA 578



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 149/312 (47%), Gaps = 5/312 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L++M+ +GV  +   + S++N   + G + +A K+F  + + GL+P +  Y  +L     
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           E R      ++  M R G++P++ TYN L+   C   ++D A KLL  M + G  PD V+
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386

Query: 138 YTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMV 192
           Y T+++  C++ ++++A  L      SGVS     YN ++ GL    +   A  L   + 
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G    + TY+ I+  LC     + +L +   + +        +F  ++   L  GR  
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 506

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA DL+      G +P+V  YS +   L   GS++E   +   MEEN C  +    ++++
Sbjct: 507 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIV 566

Query: 313 DGFAKAGNLLGA 324
               + G++  A
Sbjct: 567 RKLLQRGDITRA 578



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 5/212 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL  M   GV      + ++IN Y RV   + AL +F  +   G+ P +  YN
Sbjct: 364 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 423

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL  L    R +    +Y ++ + G +  + TYNI+L  LCKNN  D A ++   +   
Sbjct: 424 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 483

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSG----VSVYNALINGLCKEHKIEEA 184
               +  ++  ++ ++ K G+++EA++L A    +G    V  Y+ +   L ++  +EE 
Sbjct: 484 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 543

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             L   M + G   +    ++I+  L   G++
Sbjct: 544 DDLFLSMEENGCSADSRMLNSIVRKLLQRGDI 575


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/570 (29%), Positives = 270/570 (47%), Gaps = 27/570 (4%)

Query: 23  VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV-------------KIYN 69
           V G+S S G+    +N Y     A Q L    +IR+F L   +              +Y 
Sbjct: 150 VLGLSLSSGI---TVNQYT----ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYT 202

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             + A            +   M+ +G++ +   YN+L+  LCKN RV  A ++   M N 
Sbjct: 203 AGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNI 262

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSVYNA--LINGLCKEHKIEEA 184
           G   D V+Y T+V   C++ ++E A  +    +R G   S  N   +I+ L K+  +EEA
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L C++ D G+ PNV  Y+ +I  LC     + +  +  +M  RG  PN  ++  L+  
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   +A  L+++M  +G    V  Y++LI+G C  GS+D A  +   M +    P 
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +YS LI G  + G+L  A ++   M   G + N   +T ++   C++    +A  L +
Sbjct: 443 AASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM   N  PN VTFN  I+G C  G +  A +L DQM +    P+  TY  L+ GL   +
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V +A E V ++E     LN  +   +L+G+ R G   E + L  +M + G KLD ++F 
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           II+YA  KQ     +  L   ++  G   PD I YT ++  +     M +A     +M+ 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGV-KPDDIFYTCMIDALSKEENMIQALNCWDQMVI 681

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +G  PN  T  VL+ +L  + G+LG   +L
Sbjct: 682 DGYSPNTVTHTVLINNLCKS-GYLGSAELL 710



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 276/532 (51%), Gaps = 9/532 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+KL +    D    L ++M   G+  +E  +  +I++  + G+ E AL +F ++R+ G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K TV  YN +++    +        + S M ++G+ P   +Y+ L+  LC+N  +  A 
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGL 175
           +L  EM  +G A +  ++T +++  CK  +++EA  L  +   S V      +N +I G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I +AF L  +MV+ G+ P+  TY ++IS LC    V  +   +  +       N 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S T+LL G    GR  E   LW+ M   G   ++V+++ +++        +++  +  +
Sbjct: 584 FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E    P+   Y+ +ID  +K  N++ A   W++M+ +G SPN V +T ++  LC++  
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGY 703

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M   N  PN  T+N F+      G ++ A  L   M Q   L +I ++N 
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNI 762

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +  +++EA +L+ +I + G   + ++Y+TI+H +C+ G + +AF+L  +ML +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGI 526
            K D + +NI I      G+ + A+ +  + IR G + N D  +Y +LL GI
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD--TYRALLSGI 872



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 172/616 (27%), Positives = 285/616 (46%), Gaps = 91/616 (14%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL----LAENR 80
           GV+  E  + +++  + R+   E AL++ + +   G  P+    + ++D L    L E  
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           FS+       +   GM PNVF YN L+  LCKN R D A +L  EM  +G  P+ V+Y  
Sbjct: 323 FSLA----CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 141 IVSSICKLGQVEEAREL--AMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDR 194
           ++ ++CK G +E+A  L   MR   G+ V    YN+LING CK+  ++ A  LL  MV  
Sbjct: 379 LIHALCKRGMIEDALCLFDKMR-DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P   +YS +I+ LC  G++ +++ +  +M  RG   N ++FT+L+ G+    +  EA
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY------ 308
           + L+++MI    +PN V ++ +I G C  G++ +A  +  QM E    P+  TY      
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 309 -----------------------------SALIDGFAKAGNLLGASQIWNRMI------- 332
                                        +AL+ G  + G       +W+ M        
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLD 617

Query: 333 ----------------------------SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
                                         G  P+ + YTCM+  L +     QA +  +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   PNTVT    I  LC  G +  A  L  +M     LPN  TYN  LD      
Sbjct: 678 QMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +++A +L + + + G   +IV++N ++ G+C+AG + EA  L+ K+   G   D I+++
Sbjct: 738 DMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYS 796

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL-WGICN-SGGMQEAFIYLQKM 542
            II+  CK G +N A +L + +   G   PD+++Y   + W  CN  G   +A      M
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLYKG-LKPDVVAYNIFIRW--CNVHGESDKALGIYTNM 853

Query: 543 LNEGICPNFATWNVLV 558
           +  G+ PN+ T+  L+
Sbjct: 854 IRSGVQPNWDTYRALL 869



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 267/544 (49%), Gaps = 6/544 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   GV   E V+ + I +Y      + A  +  R+   G+K +   YN ++  L 
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 244

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      + + M   G+  +  TY  L+   C+   ++ A ++  +M   G  P   
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 304

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + + ++  + K   VEEA  LA + G       V  YNALI+ LCK  + ++A  L  EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG++PN +TY+ +I +LC  G +E +L +  +M  +G    ++ + SL+ GY   G  
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L + M++EG  P   +YS LI GLC NG +  A+ +  +M E     N  T++AL
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTAL 484

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+GF K   +  A++++++MI +   PN V +  M++  C      +A  L ++M     
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+ + I GLC    V  A + +  ++    + N  +   LL GL R  R  E + 
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYH 604

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+   G++L++V++  I++   +     ++  L  +M  +G K D I +  +I A  
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+  +  A+   D++   G ++P+ +++T L+  +C SG +  A +  ++ML   + PN 
Sbjct: 665 KEENMIQALNCWDQMVIDG-YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 552 ATWN 555
            T+N
Sbjct: 724 FTYN 727



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 4/385 (1%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI  N  T S I+ SL  +     +  +  +M   G + + + +T+ ++ Y        A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L  RM  EG   + V Y+ L++GLC N  + EAV V   M       +  TY  L+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           F +   L  A +I + MI  G  P+    + M+  L +  +  +A SL  K+      PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
              +N  I  LC   R D A +L  +M      PN  TY  L+  L +   +++A  L  
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++   GI++ +  YN++++G C+ G +  A  LL  M+ EG    A +++ +I   C+ G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 495 KVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            +++A++L   +   G  WN    ++T+L+ G C    M EA     KM++  + PN  T
Sbjct: 458 DLSSAMELHREMAERGIAWNN--YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIM 578
           +NV++   +  +G++   + L D M
Sbjct: 516 FNVMIEG-YCLVGNIRKAFQLYDQM 539



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 39/305 (12%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M V GV      F  ++ +  +    E++  +F  ++E G+KP    Y  ++DAL
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E         +  M  DG  PN  T+ +L+  LCK+  +  A  L  EM      P+ 
Sbjct: 664 SKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 136 VSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEM 191
            +Y   +      G +E+A++L  AM  G   S+  +N LI GLCK  KI+EA  L+ ++
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKI 783

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G  P+ I+YSTII  LC +G++                                   
Sbjct: 784 TESGFSPDCISYSTIIHELCKMGDI----------------------------------- 808

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A +LWN M+ +G  P+VVAY+  I     +G  D+A+ +   M  +   PN  TY AL
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 312 IDGFA 316
           + G +
Sbjct: 869 LSGIS 873


>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 167/565 (29%), Positives = 282/565 (49%), Gaps = 42/565 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I KL      D V+ LL +M    G    + +FI++I    R  +    +K+   + +F
Sbjct: 75  LIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKF 134

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIY-SNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
              P++KI+N ILD L+ E+   M    Y  +M   G+E + +T+ IL+K LC  NR+  
Sbjct: 135 HGSPSLKIFNSILDVLVKED-IDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGE 193

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKE 178
            +KLL  + ++G AP+ V                              VYN L++ LC+ 
Sbjct: 194 GFKLLQLIKSRGVAPNTV------------------------------VYNTLLHALCRN 223

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            K+  A  L+ EM D    PN +T++ +IS  C  GN   +L +L + F  G  P++ S 
Sbjct: 224 GKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSV 279

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T +L+     GRT EA+++  R+   G L +VVAY+TLI G C  G +   +    QME 
Sbjct: 280 TKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMEN 339

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
             C PNV TY+ LI GF+++G L  A  ++N M ++G   N V +  +++ LC       
Sbjct: 340 KGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIED 399

Query: 359 AHSLIEKM--AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             S++E M  + E    +   +N+ I GL      D + + L +M      P     + +
Sbjct: 400 GFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGN--LFPRAVDRSLM 457

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +    +   +++A  +  ++   G   +I+ YN ++HG  + G V EA +L+ +M+    
Sbjct: 458 ILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNC 517

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
                TFN +I  +C+QGKV +A++L++ I   G   P+  +Y+ L+  +C +G +Q+A 
Sbjct: 518 FPIPSTFNAVITGFCRQGKVESALKLVEDITARG-CVPNTETYSPLIDVLCRNGDLQKAM 576

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
               +M+++GI P+   WN L+ SL
Sbjct: 577 QVFMQMVDKGILPDLFIWNSLLLSL 601



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 227/491 (46%), Gaps = 58/491 (11%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEAR----- 155
           TY  L+  LC   R D   +LL EM +  G  P    + TI+     LG+    R     
Sbjct: 71  TYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRG---LGRARMTRTVIKV 127

Query: 156 -ELAMRF--GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            +L  +F     + ++N++++ L KE                 ID     Y         
Sbjct: 128 LDLVYKFHGSPSLKIFNSILDVLVKED----------------IDMAREFYRK------- 164

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
                        M   G   + ++F  L+KG  L  R  E   L   +   G  PN V 
Sbjct: 165 ------------SMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVV 212

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+TL+H LC NG +  A ++  +ME+    PN  T++ LI G+ K GN + A  +  +  
Sbjct: 213 YNTLLHALCRNGKVGRARNLMNEMED----PNDVTFNILISGYCKEGNSVQALVLLEKSF 268

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S G  P+VV+ T ++++LC      +A  ++E++       + V +NT IKG CG G+V 
Sbjct: 269 SMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVK 328

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             +  L QM+   CLPN+ TYN L+ G      +  A +L  +++  GI+ N VT++T++
Sbjct: 329 VGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLI 388

Query: 453 HGVCRAGMVVEAFQLLGKM--LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            G+C    + + F +L  M    EG++     +N IIY   K+   + + + L ++   G
Sbjct: 389 RGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKM---G 445

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG- 569
              P  +  + ++   C  G +++A     +M++EG  P+   +N LV   FS  G++  
Sbjct: 446 NLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHG-FSKQGNVRE 504

Query: 570 PVYILDDIMAN 580
            V ++++++AN
Sbjct: 505 AVELMNEMIAN 515



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 240/506 (47%), Gaps = 17/506 (3%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           Y  ++  L    RF  +  +   M    G  P    +  +++ L +        K+L  +
Sbjct: 72  YRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLV 131

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--FGSGVS----VYNALINGLCKEHK 180
                +P    + +I+  + K   ++ ARE   +    SGV      +  L+ GLC  ++
Sbjct: 132 YKFHGSPSLKIFNSILDVLVK-EDIDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNR 190

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I E F LL  +  RG+ PN + Y+T++ +LC  G V  +  ++ +M     +PN  +F  
Sbjct: 191 IGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEM----EDPNDVTFNI 246

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ GY   G + +A  L  +    GF+P+VV+ + ++  LC+ G   EA  V  ++E   
Sbjct: 247 LISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMG 306

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              +V  Y+ LI GF  AG +        +M + GC PNV  Y  ++    ++ M   A 
Sbjct: 307 GLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGFSESGMLDLAL 366

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE--CLPNITTYNELLD 418
            L   M  +    N VTF+T I+GLC   R++    +L+ M++ +     +I+ YN ++ 
Sbjct: 367 DLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSIIY 426

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GLL+ N   E+ E +T++    +    V  + ++   C+ G + +A ++  +M+ EG   
Sbjct: 427 GLLKKNGFDESAEFLTKM--GNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIP 484

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             + +N +++ + KQG V  A++L++ +     + P   ++ +++ G C  G ++ A   
Sbjct: 485 SILVYNCLVHGFSKQGNVREAVELMNEMIANNCF-PIPSTFNAVITGFCRQGKVESALKL 543

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSN 564
           ++ +   G  PN  T++ L+  L  N
Sbjct: 544 VEDITARGCVPNTETYSPLIDVLCRN 569



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 9/322 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   +A ++  R+   G    V  YN ++       +  +       M+  G  PNV TY
Sbjct: 290 GRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTY 349

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMR 160
           N+L+    ++  +D A  L  +M   G   + V++ T++  +C   ++E+     EL   
Sbjct: 350 NVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEE 409

Query: 161 FGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              G    +S YN++I GL K++  +E+   L +M +  + P  +  S +I   C  G +
Sbjct: 410 SKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGN--LFPRAVDRSLMILEHCKKGAI 467

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +  +  QM   G  P+I  +  L+ G+   G   EA +L N MI     P    ++ +
Sbjct: 468 EDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAV 527

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G ++ A+ +   +    C PN  TYS LID   + G+L  A Q++ +M+  G 
Sbjct: 528 ITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGI 587

Query: 337 SPNVVAYTCMVKVLCQNNMFHQ 358
            P++  +  ++  L Q   F +
Sbjct: 588 LPDLFIWNSLLLSLSQERHFSK 609



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 80/216 (37%), Gaps = 42/216 (19%)

Query: 359 AHSLIEKMAFENCPPNTV----TFNTFIKGLCGCGRVDWAMKLLDQMKQ-YECLPNITTY 413
           A   +E   + +  PN V    T+   I  LC   R D   +LLD+M       P    +
Sbjct: 49  ASEALEYFRWASTVPNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIF 108

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             ++ GL R    +   +++  + K     ++  +N+IL  + +  + +        M+ 
Sbjct: 109 ITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSMMA 168

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G + D  TF I                                    L+ G+C +  + 
Sbjct: 169 SGVEGDDYTFGI------------------------------------LMKGLCLTNRIG 192

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           E F  LQ + + G+ PN   +N L+ +L  N G +G
Sbjct: 193 EGFKLLQLIKSRGVAPNTVVYNTLLHALCRN-GKVG 227


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 221/434 (50%), Gaps = 5/434 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + AL  F R+      P+   +  +L ++     +S +  + + M   G+ P+V+T NIL
Sbjct: 94  DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 153

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----F 161
           + + C   R+  A+ +L ++   GC PD  ++ T++  +C  G++ EA  L  +     F
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 213

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  L+NGLCK      A  LL  MV +   PNVI Y+TII SLC    V  +  
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G +P+I ++ SL+            + L N M+    +PNVV +ST++  LC
Sbjct: 274 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 333

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +  A  V   M +    P+V TY+AL+DG      +  A ++++ M+  GC PNV 
Sbjct: 334 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 393

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +Y  ++   CQ     +A  L+E+M+ +    +TVT+NT I GLC  GR+  A+ L  +M
Sbjct: 394 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 453

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                +P++ TY  LLD L + + + EA  L+  IE   +  +I+ YN  + G+CRAG +
Sbjct: 454 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 513

Query: 462 VEAFQLLGKMLIEG 475
             A  L   +  +G
Sbjct: 514 EAARDLFSNLSCQG 527



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/427 (28%), Positives = 217/427 (50%), Gaps = 6/427 (1%)

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVY-- 168
           N +D A      M +    P  V +T +++SI K+        L+ +   FG    VY  
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LIN  C   ++  AF +L +++  G  P+  T++T+I  LC  G +  +L +  +   
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  P++ ++ +L+ G    G T  A  L   M+++   PNV+AY+T+I  LC +  + E
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE 270

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A ++  +M      P++ TY++LI            + + N M+++   PNVV ++ +V 
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 330

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+  M   AH +++ M      P+ VT+   + G C    +D A+K+ D M    C+P
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ +YN L++G  ++ R+ +A  L+ ++   G+  + VTYNT++HG+C  G +  A  L 
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALF 450

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            +M+  G   D +T+ I++   CK   +  A+ LL  I  G   + DI+ Y   + G+C 
Sbjct: 451 HEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE-GSNLDADILVYNIAIDGMCR 509

Query: 529 SGGMQEA 535
           +G ++ A
Sbjct: 510 AGELEAA 516



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 212/424 (50%), Gaps = 13/424 (3%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R L M        +  L+  + K         L  +M   GI P+V T + +I+S C + 
Sbjct: 102 RMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR 161

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +  +  +L ++   GC P+  +F +L++G  + G+  EA  L+++ I EGF P+VV Y 
Sbjct: 162 RLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYG 221

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TL++GLC  G+   A+ +   M + +C PNV  Y+ +ID   K   +  A  +++ MI+ 
Sbjct: 222 TLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITK 281

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G SP++  Y  ++  LC    +    +L+ +M      PN V F+T +  LC  G +  A
Sbjct: 282 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 341

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             ++D M +    P++ TY  L+DG    + + EA ++   +   G   N+ +YN +++G
Sbjct: 342 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 401

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+   + +A  LL +M ++G   D +T+N +I+  C  G++ +AI L   +   G+  P
Sbjct: 402 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI-P 460

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV------------RSLF 562
           D+++Y  LL  +C +  + EA + L+ +    +  +   +N+ +            R LF
Sbjct: 461 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 520

Query: 563 SNLG 566
           SNL 
Sbjct: 521 SNLS 524



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 202/396 (51%), Gaps = 11/396 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           V  L  QM   G+         +INS+   RR+G A   L    ++ + G +P    +N 
Sbjct: 131 VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLA---KLLKLGCQPDNTTFNT 187

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L  E +      ++     +G +P+V TY  L+  LCK      A +LL  M  K 
Sbjct: 188 LIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN 247

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C P+ ++Y TI+ S+CK  QV EA  L +     G+S     YN+LI+ LC   + +   
Sbjct: 248 CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVT 307

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EMV+  I PNV+ +ST++ +LC  G +  +  ++  M  RG  P++ ++T+L+ G+
Sbjct: 308 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 367

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L     EA  +++ M+ +G +PNV +Y+ LI+G C    MD+A+ +  QM       + 
Sbjct: 368 CLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 427

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LI G    G L  A  +++ M+++G  P++V Y  ++  LC+N+   +A  L++ 
Sbjct: 428 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 487

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +   N   + + +N  I G+C  G ++ A  L   +
Sbjct: 488 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 197/410 (48%), Gaps = 5/410 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  ++      L +  ++  FG+ P V   N ++++     R      + + + 
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 174

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +P+  T+N L++ LC   ++  A  L  +   +G  PD V+Y T+++ +CK+G   
Sbjct: 175 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 234

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  L            V  YN +I+ LCK+ ++ EAF L  EM+ +GI P++ TY+++I
Sbjct: 235 AAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLI 294

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +LC++   +    +L +M      PN+  F++++      G    A D+ + MI+ G  
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+VV Y+ L+ G C    MDEAV V   M    C PNV +Y+ LI+G+ +   +  A  +
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
             +M   G   + V Y  ++  LC       A +L  +M      P+ VT+   +  LC 
Sbjct: 415 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
              +  AM LL  ++      +I  YN  +DG+ R   ++ A +L + + 
Sbjct: 475 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 524



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/394 (25%), Positives = 201/394 (51%), Gaps = 2/394 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A      M+     P+ + ++ +++S+  + +  T L +  QM   G  P++++   
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  +    R   A  +  ++++ G  P+   ++TLI GLC  G + EA+ +  +     
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V TY  L++G  K GN   A ++   M+   C PNV+AY  ++  LC++    +A 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L  +M  +   P+  T+N+ I  LC          LL++M   + +PN+  ++ ++D L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +   +  A ++V  + K G++ ++VTY  ++ G C    + EA ++   M+ +G   + 
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            ++NI+I  YC+  +++ A+ LL+++   G    D ++Y +L+ G+C+ G +Q A     
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQG-LIADTVTYNTLIHGLCHVGRLQHAIALFH 451

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +M+  G  P+  T+ +L+  L  N  HL    +L
Sbjct: 452 EMVASGQIPDLVTYRILLDYLCKN-HHLAEAMVL 484



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 174/340 (51%), Gaps = 5/340 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + +I    +L  +   EG       + +++N   +VG    A+++   + +  
Sbjct: 188 LIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN 247

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  YN I+D+L  + + +    ++S M   G+ P++FTYN L+ ALC         
Sbjct: 248 CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVT 307

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGVS----VYNALINGL 175
            LL EM N    P+ V ++T+V ++CK G +  A ++  M    GV      Y AL++G 
Sbjct: 308 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 367

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +++EA  +   MV +G  PNV +Y+ +I+  C +  ++ ++G+L QM ++G   + 
Sbjct: 368 CLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 427

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G    GR   A  L++ M+  G +P++V Y  L+  LC N  + EA+ +   
Sbjct: 428 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 487

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +E ++   ++  Y+  IDG  +AG L  A  +++ +   G
Sbjct: 488 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 132/271 (48%), Gaps = 5/271 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++     L  +M  +G+S     + S+I++   +   +    +   +    
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V +++ ++DAL  E   ++ + +   M + G+EP+V TY  L+   C  + +D A 
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           K+   M +KGC P+  SY  +++  C++ ++++A  L  +       +    YN LI+GL
Sbjct: 378 KVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGL 437

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   +++ A  L  EMV  G  P+++TY  ++  LC   ++  ++ +L  +     + +I
Sbjct: 438 CHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADI 497

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
             +   + G    G    A DL++ +  +GF
Sbjct: 498 LVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 57/123 (46%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    LL+QM ++G+      + ++I+    VG  + A+ +F+ +   G  P +  Y 
Sbjct: 407 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYR 466

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD L   +  +    +   ++   ++ ++  YNI +  +C+   ++ A  L   +  +
Sbjct: 467 ILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQ 526

Query: 130 GCA 132
           G A
Sbjct: 527 GFA 529


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 162/558 (29%), Positives = 263/558 (47%), Gaps = 47/558 (8%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN---PIYSNMKRDGMEPNVFTY 103
           E    M  R+  F  K T++ YN +L  L   +RF MI+    +Y  M  D + PN+FT 
Sbjct: 151 EMLRSMNRRVDAFKFKLTLRCYNMLLMLL---SRFLMIDEMKSVYLEMLDDMVTPNIFTL 207

Query: 104 NILLKALCK-----------------------------------NNRVDGAYKLLVEMGN 128
           N ++   CK                                   N  VD A  + + M N
Sbjct: 208 NTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPN 267

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEE 183
           KGC  + VSYT ++   C+  +V+EA +L  +         V  Y  +I  LC+  +  E
Sbjct: 268 KGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTE 327

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  +  EM ++   PNV TY+ +I SLC+  N + +  IL  M  +G  P++ ++ +L+ 
Sbjct: 328 ALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALID 387

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY   G +  A ++ + M      PN   Y+ LI G C   ++ +A+S+ ++M E    P
Sbjct: 388 GYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQP 447

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           NV TY+ LI G  K G+L  A ++ + M  +G  P+   Y+  +  LC+  +  +A SL 
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E +  +    N V ++T I G C  G+V     LLD+M    C+PN  TYN L+DG  + 
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKE 567

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
              KEA  LV  + K  I+    TY  ++  + +     +A  +  +ML  G+  D   +
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
              I+AYC  G++ +A  L+ ++   G   PD + YT  +      G +  AF  L++M 
Sbjct: 628 TAFIHAYCSHGRLKDAEVLICKMNAKGIM-PDTMLYTLFIDAYGRFGSIDGAFGILKRMH 686

Query: 544 NEGICPNFATWNVLVRSL 561
             G  P++ T++ L++ L
Sbjct: 687 EVGCEPSYYTYSCLIKHL 704



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/524 (27%), Positives = 249/524 (47%), Gaps = 6/524 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID ++ +  +M  + V+ +     +++N Y ++G   +A     +I + GL      Y  
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++            N I+ +M   G   N  +Y  L+   C+  RVD A KL  +M    
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMRF-GSGVSVYNALINGLCKEHKIEEAF 185
           C P   +YT I+ ++C+LG+  EA    +E+  +     V  Y  LI  LC++   ++A 
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L  M+++G+ P+V+TY+ +I   C  G   ++L IL  M    C+PN  ++  L+ G+
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             G   H+A  L ++M+     PNVV Y+ LIHG C  G +  A  +   M E+   P+ 
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDE 484

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS  ID   K G +  A  ++  +   G   N V Y+ ++   C+         L++K
Sbjct: 485 WTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDK 544

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M    C PN++T+N+ I G C       A  L+D M + +  P   TY  L+D LL+ + 
Sbjct: 545 MLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDE 604

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             +A ++  ++   G   ++  Y   +H  C  G + +A  L+ KM  +G   D + + +
Sbjct: 605 FDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTL 664

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            I AY + G ++ A  +L R+   G   P   +Y+ L+  + N+
Sbjct: 665 FIDAYGRFGSIDGAFGILKRMHEVG-CEPSYYTYSCLIKHLSNA 707



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 253/569 (44%), Gaps = 14/569 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    E   +D    L  QM  +    +   +  +I +  ++G   +AL MF  + E  
Sbjct: 280 LIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKH 339

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  Y  ++ +L  ++ F     I + M   G+ P+V TYN L+   CK      A 
Sbjct: 340 CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASAL 399

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           ++L  M +  C+P+A +Y  ++   C+   + +A     + L  +    V  YN LI+G 
Sbjct: 400 EILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQ 459

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE  +  A+ LL  M + G+ P+  TYS  I +LC  G VE +  +   +  +G   N 
Sbjct: 460 CKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANE 519

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +++L+ GY   G+  +   L ++M+  G +PN + Y++LI G C   +  EA  +   
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI 579

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P   TY+ LID   K      A  ++++M+S G  P+V  YT  +   C +  
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  LI KM  +   P+T+ +  FI      G +D A  +L +M +  C P+  TY+ 
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSC 699

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE-AFQLLGKMLIE 474
           L+  L      + +          G+  N  +        C   +  E    L GKM   
Sbjct: 700 LIKHLSNAKPKEVSSSSELSDLSSGVASNDFSN-------CWRRVDYEFTLDLFGKMAEH 752

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   +A T+   I   CK G +  A +L D ++  G+ +P+   Y SLL   C  G   E
Sbjct: 753 GCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQ-SPNEDIYNSLLGCSCQLGLYGE 811

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           A  +L  M+     P+  +  +L+  L+ 
Sbjct: 812 AIRWLDIMIENRHLPHLDSCKLLLCGLYD 840



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 235/559 (42%), Gaps = 69/559 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E    D  + +L  M  +G+  S   + ++I+ Y + GL+  AL++   +    
Sbjct: 350 LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + YN ++              +   M    ++PNV TYNIL+   CK   +  AY
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
           KLL  M   G  PD  +Y+  + ++CK G VEEAR L       G+     +Y+ LI+G 
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+ +  +LL +M+  G  PN ITY+++I   C   N + +  ++  M  R   P  
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG----------- 284
            ++T L+   L      +A D++++M+  G  P+V  Y+  IH  CS+G           
Sbjct: 590 DTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649

Query: 285 ------------------------SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG- 319
                                   S+D A  +  +M E  C P+  TYS LI   + A  
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP 709

Query: 320 -----------NLLGA-----SQIWNR------------MISNGCSPNVVAYTCMVKVLC 351
                         G      S  W R            M  +GC+PN   Y   +  LC
Sbjct: 710 KEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLC 769

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +      AH L + M  +   PN   +N+ +   C  G    A++ LD M +   LP++ 
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLD 829

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +   LL GL      ++A  +     +C    + + +  ++ G+ + G+  +   L G M
Sbjct: 830 SCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIM 889

Query: 472 LIEGTKLDAITFNIIIYAY 490
             +G ++   T++++I  +
Sbjct: 890 ETQGCQIHPKTYSMLIEGF 908



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/426 (21%), Positives = 180/426 (42%), Gaps = 34/426 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I+ L ++  ++  + L + +K +G+  +E ++ ++I+ Y +VG       +  ++   G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++D    E  F     +   M +  +EP   TY IL+  L K++  D A+
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +  +M + G  PD   YT  + + C  G++++A  L  +  +        +Y   I+  
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY 669

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG--------------------- 214
            +   I+ AF +L  M + G +P+  TYS +I  L +                       
Sbjct: 670 GRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASND 729

Query: 215 --------NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
                   + E +L + G+M   GC PN +++   + G    G    A  L++ M  +G 
Sbjct: 730 FSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQ 789

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN   Y++L+   C  G   EA+     M EN   P++ +   L+ G    GN   A +
Sbjct: 790 SPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKR 849

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++   +    + + + +  ++  L +  +  +   L   M  + C  +  T++  I+G  
Sbjct: 850 VFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFD 909

Query: 387 GCGRVD 392
           G   +D
Sbjct: 910 GIQEID 915


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 266/520 (51%), Gaps = 10/520 (1%)

Query: 53  FYRIREF-GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC 111
           F  +RE  G +     Y+ +L +L   +   +    Y  M+ DG    +  Y  ++ ALC
Sbjct: 147 FDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK---LGQVEEARELAMRFGS----G 164
           KN   + A   + ++   G   D+   T+++   C+   L    +  +L  R G+     
Sbjct: 207 KNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNS 266

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           VS Y+ LI+GLC+  ++EEAF L  +M ++G  P+  TY+ +I +LCD G ++ +  +  
Sbjct: 267 VS-YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFD 325

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  RGC PN+H++T L+ G    G+  EA+ +  +M+++G  P+V+ Y+ LI+G C +G
Sbjct: 326 EMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDG 385

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +  A  +   ME+ +C PNV T++ L++G  + G    A  +  RM+ NG SP++V+Y 
Sbjct: 386 RVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYN 445

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC+    + A+ L+  M   +  P+ +TF   I   C  G+ D A   L  M + 
Sbjct: 446 VLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK 505

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               +  T   L+DG+  V + ++A  ++  + K  +     + N IL  + +   + E 
Sbjct: 506 GISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEE 565

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +LGK+   G     +T+  ++    + G ++ + ++L+ ++  G   P++  YT ++ 
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCL-PNVYPYTIIIN 624

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G+C  G ++EA   L  M + G+ PN  T+ V+V+   +N
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/530 (25%), Positives = 259/530 (48%), Gaps = 14/530 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM  +G   S   +  +I +    GL ++A  +F  +   G KP V  Y  ++D L 
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLC 347

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +    N +   M +DG+ P+V TYN L+   CK+ RV  A++LL  M  + C P+  
Sbjct: 348 RDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++  +C++G+  +A  L  R         +  YN LI+GLC+E  +  A+ LL  M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM 467

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               ++P+ +T++ II++ C  G  + +   LG M  +G + +  + T+L+ G    G+T
Sbjct: 468 NSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKT 527

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  +   +++   L    + + ++  L     + E +++  ++ +    P+V TY+ L
Sbjct: 528 RDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  ++G++ G+ ++   M  +GC PNV  YT ++  LCQ     +A  L+  M     
Sbjct: 588 VDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR-VKEA- 429
            PN VT+   +KG    G++D A++ +  M +     N   Y+ LL G +   + ++E  
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETD 707

Query: 430 ----FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
                EL++ +E+ G   + +    +   +C+ G   E+  L+  +L  G  L+    +I
Sbjct: 708 PECIKELISVVEQLGGSTSGLCIFLVTR-LCKEGRTDESNGLVQTILKSGVFLEK-AIDI 765

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           I+ +YC + K    ++L+  +   G + P   S+  ++ G+   G  + A
Sbjct: 766 IMESYCSKKKHTKCVELITLVLKSG-FVPSFKSFCLVIQGLKKEGDTERA 814



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/518 (22%), Positives = 243/518 (46%), Gaps = 15/518 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L    +I+    + ++M  +G+  S   + ++IN Y + G    A ++   + +  
Sbjct: 342 LIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V+ +N +++ L    +      +   M  +G+ P++ +YN+L+  LC+   ++ AY
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAY 461

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVSVY----NALINGL 175
           KLL  M +    PD +++T I+++ CK G+ + A   L +    G+S+       LI+G+
Sbjct: 462 KLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   K  +A ++L  +V   +     + + I+  L     ++  L +LG++   G  P++
Sbjct: 522 CNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSV 581

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G +  G    +  +   M   G LPNV  Y+ +I+GLC  G ++EA  +   
Sbjct: 582 VTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK--VLCQN 353
           M+++   PN  TY+ ++ G+   G L  A +    M+  G   N   Y+ +++  VL Q 
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQK 701

Query: 354 NMFHQAHSLIEKM--AFENCPPNTVTFNTF-IKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +       I+++    E    +T     F +  LC  GR D +  L+  + +       
Sbjct: 702 GIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLE- 760

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
              + +++      +  +  EL+T + K G   +  ++  ++ G+ + G    A +L+ +
Sbjct: 761 KAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVME 820

Query: 471 MLIEGTKLDAITFNIIIYAYC--KQGKVNNAIQLLDRI 506
           +L     ++     ++ Y  C  + G  +  I L+D++
Sbjct: 821 LLTSNGVVEK--SGVLPYVECLMETGDCSEVIDLVDQL 856


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 243/466 (52%), Gaps = 5/466 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I S   +  A++A + FY ++E G+ PT++  N +L   L  NR      +Y+ M
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R  ++ +V+T+NI++  LCK  ++  A   +  M   G  P+ V+Y TIV   C  G+V
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E A  +       +       Y +LI+G+CK+ ++EEA  +  EMV +G+ P+ + Y+T+
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C+ GN++ +     +M  +G +P + ++ SL+    +  RT EA  +   +  +G 
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+ + Y+ LI+G C   +  +A  +  +M  +   P   TY++L+   +K   +  A  
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++ ++ S G  P+ + +  ++   C N+    A  L++ M     PP+ VTFNT ++G C
Sbjct: 453 LFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHC 512

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+V+ A +L D+MK+    P+  ++N L+ G  R   +K+AF +  E+   G    ++
Sbjct: 513 REGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVL 572

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           TYN ++ G+C+      A +LL +M+ +G   D  T+  +I    K
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 259/508 (50%), Gaps = 11/508 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIY----SNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           P+ K   H+L   L     + I  I+    ++  R G + ++  ++ L+K+ C  NR D 
Sbjct: 111 PSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSI-VFDYLIKSCCDMNRADE 169

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALIN 173
           A++    M  KG  P   +  +++S   KL + E A         +R  S V  +N +IN
Sbjct: 170 AFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMIN 229

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
            LCKE K+++A   +  M   G+ PN++TY+TI+   C  G VE +  IL  M  +   P
Sbjct: 230 VLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEP 289

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  ++ SL+ G    GR  EAS ++  M+++G  P+ V Y+TLI G C+ G++D A +  
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK 349

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +    P ++TY++LI           A  +   +   G SP+ + Y  ++   C+ 
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L ++M      P   T+ + +  L    R+  A  L  ++     LP+   +
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMF 469

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L+DG    + VK AFEL+ ++++  +  + VT+NTI+ G CR G V EA +L  +M  
Sbjct: 470 NALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKR 529

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G K D I+FN +I  Y ++G + +A ++ + +   G +NP +++Y +L+ G+C +    
Sbjct: 530 RGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG-FNPTVLTYNALVQGLCKNQEGD 588

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
            A   L++M+++G+ P+  T+  L+  +
Sbjct: 589 LAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 197/398 (49%), Gaps = 5/398 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  +IN   + G  ++A      +   G+KP +  YN I+    +  R    + I + M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           KR  +EP+ FTY  L+  +CK  R++ A K+  EM  KG  P AV Y T++   C  G +
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A       L       +S YN+LI+ L  E + +EA  ++ E+ ++GI P+ ITY+ +
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C   N + +  +  +M   G  P   ++TSLL       R  EA DL+ ++  EG 
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+ + ++ LI G CSN ++  A  +   M+    PP+  T++ ++ G  + G +  A +
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +++ M   G  P+ +++  ++    +      A  +  +M      P  +T+N  ++GLC
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
                D A +LL +M      P+ TTY  L++G+ +VN
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 177/350 (50%), Gaps = 5/350 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++    +L  MK + +      + S+I+   + G  E+A K+F  + + GL+P+  IYN 
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D    +    M +     M + G+ P + TYN L+ AL    R D A  ++ E+  KG
Sbjct: 332 LIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKG 391

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
            +PDA++Y  +++  C+    ++A       LA         Y +L++ L K+++++EA 
Sbjct: 392 ISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEAD 451

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  ++   G+ P+ I ++ +I   C   NV+ +  +L  M      P+  +F ++++G+
Sbjct: 452 DLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGH 511

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+  EA +L++ M R G  P+ ++++TLI G    G + +A  V  +M +    P V
Sbjct: 512 CREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTV 571

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            TY+AL+ G  K      A ++   M+S G +P+   Y  +++ + + N+
Sbjct: 572 LTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNI 621



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 161/322 (50%), Gaps = 5/322 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  + ++  ++    + ++M  +G+  S  ++ ++I+ +   G  + A      + + G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PT+  YN ++ AL  E R      +   ++  G+ P+  TYNIL+   C+      A+
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF 416

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L  EM   G  P   +YT+++  + K  +++EA +L  +  S        ++NALI+G 
Sbjct: 417 LLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGH 476

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    ++ AF LL +M    + P+ +T++TI+   C  G VE +  +  +M  RG  P+ 
Sbjct: 477 CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDH 536

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            SF +L+ GY   G   +A  + N M+  GF P V+ Y+ L+ GLC N   D A  +  +
Sbjct: 537 ISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKE 596

Query: 296 MEENSCPPNVTTYSALIDGFAK 317
           M      P+ TTY  LI+G AK
Sbjct: 597 MVSKGMTPDDTTYFTLIEGIAK 618



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 172/397 (43%), Gaps = 36/397 (9%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I E F  L    DR    + I +  +I S CD+   + +      M  +G  P I +  S
Sbjct: 132 IREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL  +L   RT  A  L+  M R     +V  ++ +I+ LC  G +              
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKL-------------- 237

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
                           KA + +G       M ++G  PN+V Y  +V   C +     A 
Sbjct: 238 ---------------KKAKDFVG------HMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +++  M  +   P++ T+ + I G+C  GR++ A K+ ++M Q    P+   YN L+DG 
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                +  A     E+ K GI   + TYN+++H +       EA  ++ ++  +G   DA
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+NI+I  YC+      A  L D +   G   P   +YTSLL  +     M+EA    +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASG-IKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           K+ +EG+ P+   +N L+    SN    G   +L D+
Sbjct: 456 KITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDM 492



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 30/288 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +   D  + ++++++ +G+S     +  +IN Y R   A++A  +   +   G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KPT K Y  +L  L  +NR    + ++  +  +G+ P+   +N L+   C N+ V GA+
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAF 486

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +LL +M      PD V++ TI                              + G C+E K
Sbjct: 487 ELLKDMDRMKVPPDEVTFNTI------------------------------MQGHCREGK 516

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +EEA  L  EM  RGI P+ I+++T+IS     G+++ +  +  +M   G NP + ++ +
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           L++G         A +L   M+ +G  P+   Y TLI G+      DE
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 161/574 (28%), Positives = 282/574 (49%), Gaps = 57/574 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+++K  G S S   F  +I +Y ++ + E+A++ F  +++F  KP V  YN +L  ++
Sbjct: 113 VLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMV 172

Query: 77  AENRFSMINPIYSNMKR--------------DGM---------------------EPNVF 101
            +    +   IY+ M +              DGM                      PN  
Sbjct: 173 RKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKI 232

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TY I++  LC+  + D AY+L + M + GC PD+V+Y  ++   CKLG+V+EA  L   F
Sbjct: 233 TYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYF 292

Query: 162 GSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                V     Y+ LI+GL +  + E+A     +M +  I P+VI Y+ ++  L   G  
Sbjct: 293 EKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKF 352

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +L +L +M  RG  P+ H + +L+KGY   G   EA  L   + +     +   Y+ L
Sbjct: 353 KDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTIL 412

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM----- 331
           I G+C +G + +A  +  +ME++ C P+V T++ALIDGF KAGN+  A  ++ +M     
Sbjct: 413 ICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRN 472

Query: 332 ------ISNGCSP--NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
                 +S G +   +  +   MV+ LC + +  +A++++ ++      PN +T+N  I 
Sbjct: 473 PSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIH 532

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  G ++ A KL  +++     P+  TY  L++GLL  NR ++AF ++ +I K G   
Sbjct: 533 GFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTP 592

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ-L 502
               Y + +   CR   +  AF L  K L      D+     +   + ++G+V  A++ L
Sbjct: 593 ITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENF-EKGEVEEAVRGL 651

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           L+      ++   +  YT  L G+C +G ++EA 
Sbjct: 652 LEMDFKLNDFQ--LAPYTIWLIGLCQAGRLEEAL 683



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 258/512 (50%), Gaps = 25/512 (4%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N I+D L+ +N F +   +   +KR G   +   + +L++A  K + ++ A +    M 
Sbjct: 94  HNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMK 153

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIE 182
           +  C PD  +Y T++  + +   V  A     R L +     ++ ++ LI+G+CK  K +
Sbjct: 154 DFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQ 213

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  +  EM  R I PN ITY+ IIS LC     + +  +   M   GC P+  ++ +LL
Sbjct: 214 NALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALL 273

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+   GR  EA  L     ++ ++ +   YS LI GL      ++A     +M E++  
Sbjct: 274 HGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIK 333

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V  Y+ ++ G +KAG    A ++ N M   G  P+   Y  ++K  C   +  +A SL
Sbjct: 334 PDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSL 393

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
             +++  +C  +  T+   I G+C  G V  A ++ ++M+++ C P++ T+N L+DG  +
Sbjct: 394 HLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCK 453

Query: 423 VNRVKEAFELVTEIE-------------KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              +++A  L  ++E                  L+  +  T++  +C +G++++A+ +L 
Sbjct: 454 AGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILM 513

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           ++   G   + IT+NI+I+ +CK G +N A +L   ++  G  +PD ++Y +L+ G+ ++
Sbjct: 514 QLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG-LSPDSVTYGTLINGLLSA 572

Query: 530 GGMQEAFIYLQKMLNEGICP------NFATWN 555
              ++AF  L ++L  G  P      +F TW+
Sbjct: 573 NREEDAFTVLDQILKNGCTPITEVYKSFMTWS 604



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 125/534 (23%), Positives = 227/534 (42%), Gaps = 55/534 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  + D    L   MK  G       + ++++ + ++G  ++AL +     +  
Sbjct: 237 IISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDR 296

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                + Y+ ++D L    RF      Y  M    ++P+V  Y I++K L K  +   A 
Sbjct: 297 YVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDAL 356

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           +LL EM  +G  PD   Y  ++   C LG ++EA+ L +        S    Y  LI G+
Sbjct: 357 RLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGM 416

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   + +A  +  EM   G  P+V+T++ +I   C  GN+E +  +  +M + G NP++
Sbjct: 417 CRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEI-GRNPSL 475

Query: 236 H--------------SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
                          S  ++++     G   +A ++  ++   GF PN++ Y+ LIHG C
Sbjct: 476 FLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFC 535

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G+++ A  +  +++     P+  TY  LI+G   A     A  + ++++ NGC+P   
Sbjct: 536 KAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITE 595

Query: 342 AYTCMVKVLCQNNMFHQAHSL----------------------IEK------------MA 367
            Y   +   C+ N    A SL                       EK            M 
Sbjct: 596 VYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMD 655

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
           F+        +  ++ GLC  GR++ A+K+   ++++  L    +  +L+  LL+V  + 
Sbjct: 656 FKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLD 715

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRA-GMVVEAFQLLGKMLIEGTKLDA 480
            A E+       G  L     N +L  + R+      AF LL +M   G  LD+
Sbjct: 716 LAAEIFLYTIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGYDLDS 769



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 1/358 (0%)

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++++ II  L      E    +L ++   G + +  +FT L++ Y       +A + +  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M      P+V  Y+T++H +     +  A+ +  +M + +C PN+ T+S LIDG  K+G 
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A Q+++ M      PN + YT ++  LCQ      A+ L   M    C P++VT+N 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            + G C  GRVD A+ LL   ++   + +   Y+ L+DGL R  R ++A     ++ +  
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I+ +++ Y  ++ G+ +AG   +A +LL +M   G   D   +N +I  YC  G ++ A 
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            L   I     ++    +YT L+ G+C SG + +A     +M   G  P+  T+N L+
Sbjct: 392 SLHLEISKNDCFS-SACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALI 448


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/549 (26%), Positives = 269/549 (48%), Gaps = 21/549 (3%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP-TVKIYNHILDALLAENRFS 82
           + VSCS G  + V+  + R+   E   +         + P TV+ Y  ++D      R  
Sbjct: 92  DSVSCSNGPAL-VLALFNRICREEAGPR---------VAPLTVRTYGILMDCCCRARRPD 141

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTI 141
           +     + + R G++         LK LC   R D A  +L+  M    C PDA+SY T+
Sbjct: 142 LGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTV 201

Query: 142 VSSICKLGQVEEARELAMRFGS-------GVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           + S+C   + +EA ++  R           V  +N +I+G  K+ ++ +A  L  EMV +
Sbjct: 202 IKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQK 261

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P+V TY++I+ +LC    ++ +  +L QM  +G  P+  ++ +++ GY   G   E+
Sbjct: 262 GVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKES 321

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
           + ++ +M  +G +P+ V +S+ +  LC +G   +A  +   M      P++ +YS L+ G
Sbjct: 322 AKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHG 381

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +A  G     + +++ M   G   N      ++    +  M  +A  +  +M  +   PN
Sbjct: 382 YATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPN 441

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            VT++T I   C  GR+  AM+   QM      PN   Y+ L+ G      + +A E ++
Sbjct: 442 VVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFIS 501

Query: 435 EIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           E+   G+   NIV +++I+H +C  G V++A  +   ++  G +   +TFN +I  YC  
Sbjct: 502 EMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLV 561

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           GK+  A  +LD +   G   PD+++  +L+ G C SG + +  I  ++ML++ + P   T
Sbjct: 562 GKMEKAFGVLDAMVSVG-IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 620

Query: 554 WNVLVRSLF 562
           +N+++  L 
Sbjct: 621 YNIVLDGLL 629



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 266/554 (48%), Gaps = 9/554 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           ++Q+M  EG  CS  V  F +VI+ + + G   +A  +F  + + G+ P V  YN I+DA
Sbjct: 217 MVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDA 276

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           +   M   G+EP+  TYN ++     +     + K+  +M +KG  PD
Sbjct: 277 LCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPD 336

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLC 189
            V++++ +SS+CK G+ ++A E+     +      +  Y+ L++G   E +  +   L  
Sbjct: 337 TVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFH 396

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M D+GI  N    + +IS+    G ++ ++ +  +M  +G  PN+ ++++L+  +   G
Sbjct: 397 SMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMG 456

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS-VSYQMEENSCPPNVTTY 308
           R  +A + +++MI  G  PN   Y +LIHG C +G + +A   +S  M +    PN+  +
Sbjct: 457 RLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFF 516

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S++I      G ++ A  ++N +I  G  P +V +  ++   C      +A  +++ M  
Sbjct: 517 SSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 576

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+ VT NT + G C  G++D  + L  +M   +  P   TYN +LDGLLR  R   
Sbjct: 577 VGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSA 636

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A ++  E+   G  ++I TY  +L G+CR  +  EA  L  K+     K D    N +I 
Sbjct: 637 AKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMIN 696

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A  K  +   A  L   I   G   P++ +Y  ++  +   G ++EA      M   G  
Sbjct: 697 ALYKVRRREEANDLFAAISTSG-LVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCA 755

Query: 549 PNFATWNVLVRSLF 562
           P+    N ++R L 
Sbjct: 756 PSSRLLNDIIRMLL 769



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 259/495 (52%), Gaps = 10/495 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           + ++M  +G+      F S ++S  + G ++ A ++F  +   G  P +  Y+ +L    
Sbjct: 324 MFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYA 383

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E RF+ +N ++ +M   G+  N    NIL+ A  K   +D A  +  EM  +G  P+ V
Sbjct: 384 TEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVV 443

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+T++S+ C++G++ +A E     +++      +VY++LI+G C    + +A   + EM
Sbjct: 444 TYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503

Query: 192 VDRGID-PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           + +G+  PN++ +S+II SLC  G V  +  +   +   G  P I +F SL+ GY L G+
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 563

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A  + + M+  G  P+VV  +TL+ G C +G +D+ + +  +M      P   TY+ 
Sbjct: 564 MEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNI 623

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++DG  +AG    A ++++ MI +G + ++  Y  ++K LC+N++  +A +L  K+   +
Sbjct: 624 VLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMD 683

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C  +    NT I  L    R + A  L   +     +PN++TY  ++  LL+   V+EA 
Sbjct: 684 CKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEAD 743

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT--KLDAITFNIIIY 488
            + + +EK G   +    N I+  + + G +V+A   + K  ++GT   L+A T ++++ 
Sbjct: 744 TMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSK--VDGTIISLEASTTSLLMS 801

Query: 489 AYCKQGKVNNAIQLL 503
            +  +GK    I+ L
Sbjct: 802 LFSSKGKHREQIKFL 816



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 16/239 (6%)

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL--------CGCG 389
           P V     + +V         AH L +++  +  P +  + N F+  L        C  G
Sbjct: 40  PQVAFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNG 99

Query: 390 RVDWAMKLLDQMKQYECLPNIT-----TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
                + L +++ + E  P +      TY  L+D   R  R       V  + + G++  
Sbjct: 100 PA-LVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTG 158

Query: 445 IVTYNTILHGVCRAGMVVEAFQ-LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +   T L  +C A    EA   LL +M       DAI++N +I + C   +   A+ ++
Sbjct: 159 TIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMV 218

Query: 504 DRI-RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            R+ + GG  +PD++S+ +++ G    G + +A     +M+ +G+ P+  T+N +V +L
Sbjct: 219 QRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDAL 277


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 261/512 (50%), Gaps = 13/512 (2%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMIN---PIYSNMKRD---GMEPNVFTYNILLKAL 110
            +   K ++  YN +L  L   +RFSM++    +Y  M  D    + PN+ T N +L + 
Sbjct: 143 HQLAFKLSLTSYNRLLMCL---SRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVY 168
           CK   +  A    V +      PD  +YT++V   C+   VE A  +   M   + VS Y
Sbjct: 200 CKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVS-Y 258

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
             LI+GLC+  K+ EA      M + G  P V TY+ ++ +LC+ G    +L + G+M  
Sbjct: 259 TNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRE 318

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RGC PN++++T L+      GR  EA  + N M+ +G  P+VV ++ LI   C  G M++
Sbjct: 319 RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           AV V   ME     PNV TY+ LI GF +  ++  A  + N+M+ +  SP+VV Y  ++ 
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+  +   A  L   M  +   P+  TFN F+  LC  GRV  A ++L+ +K+     
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKA 498

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N   Y  L+DG  +  +++ A  L   +       N +T+N ++ G+ + G V +A  L+
Sbjct: 499 NEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLV 558

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M     K    T+NI++    K+   + A ++L+R+   G + P++++YT+ +   C+
Sbjct: 559 EDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSG-YQPNVVTYTAFIKAYCS 617

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            G ++EA   + K+ NEG+  +   +N+L+ +
Sbjct: 618 QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINA 649



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 251/497 (50%), Gaps = 16/497 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++NSY ++G    A   F RI      P +  Y  ++      +       ++  M R 
Sbjct: 194 TMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR 253

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
               N  +Y  L+  LC+  ++  A +    M   GC P   +YT +V ++C+ G+  EA
Sbjct: 254 ----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEA 309

Query: 155 RELAMRFGS--------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             L   FG          V  Y  LI+ LCKE +++EA  +L EMV++G+ P+V+ ++ +
Sbjct: 310 LSL---FGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I S C  G +E ++G+LG M  +   PN+ ++  L+ G+  G     A  L N+M+    
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKL 426

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+VV Y+TLIHGLC  G +D A  +   M  +   P+  T++A +    + G +  A Q
Sbjct: 427 SPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQ 486

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I   +       N  AYT ++   C+      A SL ++M  E C PN++TFN  I GL 
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLR 546

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+V  AM L++ M +++  P + TYN L++ +L+      A E++  +   G Q N+V
Sbjct: 547 KEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVV 606

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY   +   C  G + EA +++ K+  EG  LD+  +N++I AY   G +++A  +L R+
Sbjct: 607 TYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRM 666

Query: 507 RGGGEWNPDIISYTSLL 523
            G G   P  ++Y+ L+
Sbjct: 667 FGTG-CEPSYLTYSILM 682



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 271/576 (47%), Gaps = 53/576 (9%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + ++I+     G   +AL+ + R+RE G  PTV+ Y  ++ AL    R      ++  M+
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMR 317

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G EPNV+TY +L+  LCK  R+D A K+L EM  KG AP  V +  ++ S CK G +E
Sbjct: 318 ERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMME 377

Query: 153 EAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A  +     + +    V  YN LI G C+   ++ A  LL +MV+  + P+V+TY+T+I
Sbjct: 378 DAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI 437

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNP---------------------------------- 233
             LC+VG V+++  +   M   G +P                                  
Sbjct: 438 HGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVK 497

Query: 234 -NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N H++T+L+ GY   G+   A+ L+ RM+ E  LPN + ++ +I GL   G + +A+ +
Sbjct: 498 ANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLL 557

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M +    P + TY+ L++   K  +   A++I NR+IS+G  PNVV YT  +K  C 
Sbjct: 558 VEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCS 617

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A  ++ K+  E    ++  +N  I      G +D A  +L +M    C P+  T
Sbjct: 618 QGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLT 677

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQL---NIVTYNTILHGVCRAGMVVEAFQLLG 469
           Y+ L+  L+     KE    V      G+ +   NI   NT +      G+    F+   
Sbjct: 678 YSILMKHLVIEKHKKEGSNPV------GLDVSLTNISVDNTDIWSKIDFGITTVLFE--- 728

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           KM   G   +  T++ +I   CK G++N A  L   +R GG  +P  I + SLL   C  
Sbjct: 729 KMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGG-ISPSEIIHNSLLSSCCKL 787

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           G   EA   L  M+      +  ++ +L+  LF  +
Sbjct: 788 GMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQM 823



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/572 (25%), Positives = 274/572 (47%), Gaps = 24/572 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++  +D    +L +M  +GV+ S   F ++I SY + G+ E A+ +   +    
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V+ YN ++              + + M    + P+V TYN L+  LC+   VD A 
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +L   M   G +PD  ++   +  +C++G+V EA ++          +    Y ALI+G 
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  KIE A  L   M+     PN IT++ +I  L   G V+ ++ ++  M      P +
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTL 570

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           H++  L++  L       A+++ NR+I  G+ PNVV Y+  I   CS G ++EA  +  +
Sbjct: 571 HTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIK 630

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ++      +   Y+ LI+ +   G L  A  +  RM   GC P+ + Y+ ++K       
Sbjct: 631 IKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMK------- 683

Query: 356 FHQAHSLIEKMAFENCPP---NTVTFNTFIKGLCGCGRVDWAMK--LLDQMKQYECLPNI 410
               H +IEK   E   P   +    N  +       ++D+ +   L ++M +  C+PN+
Sbjct: 684 ----HLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNL 739

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY++L++GL +V R+  AF L   + + GI  + + +N++L   C+ GM  EA  LL  
Sbjct: 740 NTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDS 799

Query: 471 MLIEGTKLDAI-TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           M+ E + L  + ++ ++I    +Q     A  +   +   G +N D +++  L+ G+  +
Sbjct: 800 MM-ECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCG-YNYDEVAWKVLIDGLAKT 857

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G + +    L  M   G   +  T+++L++ L
Sbjct: 858 GYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 8/300 (2%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM---EENSCPPNVTTYSALIDGFAKAGNL 321
            F  ++ +Y+ L+  L     +DE +S+  +M     NS  PN+ T + +++ + K GN+
Sbjct: 146 AFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM 205

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A   + R++     P++  YT +V   C+N+   +A  +   M       N V++   
Sbjct: 206 AVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNL 261

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC  G++  A++   +M++  C P + TY  L+  L    R  EA  L  E+ + G 
Sbjct: 262 IHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGC 321

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+ TY  ++  +C+ G + EA ++L +M+ +G     + FN +I +YCK+G + +A+ 
Sbjct: 322 EPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVG 381

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +    +  P++ +Y  L+ G C    M  A   L KM+   + P+  T+N L+  L
Sbjct: 382 VLGLME-SKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGL 440



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 155/378 (41%), Gaps = 69/378 (18%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I+    L ++M  E    +   F  +I+  R+ G  + A+ +   + +F +KPT+  YN
Sbjct: 515 KIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYN 574

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV------------- 116
            +++ +L E  F   N I + +   G +PNV TY   +KA C   R+             
Sbjct: 575 ILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNE 634

Query: 117 ----------------------DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
                                 D A+ +L  M   GC P  ++Y+ ++  +      +E 
Sbjct: 635 GVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEG 694

Query: 155 RELA-------------------MRFG---------------SGVSVYNALINGLCKEHK 180
                                  + FG                 ++ Y+ LINGLCK  +
Sbjct: 695 SNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGR 754

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF L   M + GI P+ I +++++SS C +G    ++ +L  M       ++ S+  
Sbjct: 755 LNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKL 814

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G        +A  ++  ++R G+  + VA+  LI GL   G +D+   +   ME+N 
Sbjct: 815 LICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNG 874

Query: 301 CPPNVTTYSALIDGFAKA 318
           C  +  TYS L+    +A
Sbjct: 875 CRLHPETYSMLMQELNRA 892



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 8/175 (4%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI---EKCGIQLNIV 446
           R++ A    D   Q     ++T+YN LL  L R + V E   L  E+       +  N++
Sbjct: 131 RMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLI 190

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           T NT+L+  C+ G +  A     ++L      D  T+  ++  YC+   V  A  +   +
Sbjct: 191 TLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM 250

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                   + +SYT+L+ G+C +G + EA  +  +M  +G  P   T+ VLV +L
Sbjct: 251 P-----RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCAL 300


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 281/582 (48%), Gaps = 32/582 (5%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID +  L + M  +GV  +   F +++N++ ++G    A   F  + +FG       Y  
Sbjct: 171 IDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTS 230

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++      +       ++  M ++G   N  +Y  L+   C+  ++D A +L  +M   G
Sbjct: 231 LILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDG 290

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
           C PD  +YT +V++ C++G+  EA +             V  Y  LI+  CK  K++E  
Sbjct: 291 CFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGM 350

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L  M+++G+  +V+ ++ +I   C  G +E ++ +L  M +    PN  ++  L+ G+
Sbjct: 351 EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                   A  L N+M      PN+V Y+TLIHGLC    +D A  + + M ++   P+ 
Sbjct: 411 CRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQ 470

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T+ A ID   K G +  A Q++  +       N   YT ++   C+   F  AH L ++
Sbjct: 471 RTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR 530

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M FE C PN++TFN  + GL   G+V+ AM L+D M +++  P + TY  L++ +LR + 
Sbjct: 531 MLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESD 590

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
              A   + ++   G Q N+VTY   +   CR G ++EA +++ K+  EG  LD+  +++
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDV 650

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC----NSGGM--------- 532
           ++ AY   G++++A  +L R+   G   P   +Y+ LL  +     N  GM         
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTG-CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNI 709

Query: 533 --QEAFIY-----------LQKMLNEGICPNFATWNVLVRSL 561
               A I+            +KM+ +G  PN  T++ L++ L
Sbjct: 710 SVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGL 751



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 286/637 (44%), Gaps = 72/637 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+     + + M  EG   +E  + ++I+ +  VG  ++AL++F++++E G  P V  Y 
Sbjct: 240 ELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYT 299

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ A     + +     +  M  +G+EPNV+TY +L+   CK  ++D   ++L  M  K
Sbjct: 300 VLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK 359

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA---------------------------------RE 156
           G     V +  ++   CK G +E+A                                 R 
Sbjct: 360 GLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRA 419

Query: 157 LAM-------RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +A+       +    +  YN LI+GLCK   ++ A+ L   M+  G  P+  T+   I  
Sbjct: 420 MALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDC 479

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC +G VE +  +   +  +    N   +T+L+ GY    +  +A  L+ RM+ EG  PN
Sbjct: 480 LCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPN 539

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            + ++ L+ GL   G +++A+S+   M +    P V TY+ LI+   +  +   A+   +
Sbjct: 540 SITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLD 599

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +MIS+GC PNVV YT  +K  C+     +A  ++ K+  E    ++  ++  +      G
Sbjct: 600 QMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIG 659

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA-------------------- 429
           ++D A  +L +M    C P+  TY+ LL  L+     KE                     
Sbjct: 660 QLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKI 719

Query: 430 --FELVT----EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             FE++T    ++ + G   N+ TY+ ++ G+C+   +  AF+L   M   G        
Sbjct: 720 ADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIH 779

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQK 541
           N ++ + CK G    A++LLD +    E+N    + SY  L+ G+   G  ++A    + 
Sbjct: 780 NSLLSSCCKLGMHEEALRLLDSMM---EYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRS 836

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           +L+ G   +   W VL+  L    G++     L DIM
Sbjct: 837 LLSCGYNYDEVVWKVLLDGLVRK-GYVDECSQLRDIM 872



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 235/543 (43%), Gaps = 66/543 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    +L  M  +G+  S   F ++I+ Y + G+ E A+ +   ++   + P  + YN
Sbjct: 345 KMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYN 404

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     +        + + M  + + PN+ TYN L+  LCK   VD A++L   M   
Sbjct: 405 ELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEA 184
           G  PD  ++   +  +CK+G+VE+A ++        +     +Y ALI+G CK  K  +A
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDA 524

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI---------------------- 222
             L   M+  G  PN IT++ ++  L   G VE ++ +                      
Sbjct: 525 HLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEE 584

Query: 223 -------------LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                        L QM   GC PN+ ++T+ +K Y   GR  EA ++  ++  EG L +
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLD 644

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI-----DGFAKAGNLLGA 324
              Y  L++     G +D A  V  +M +  C P+  TYS L+     + + K G  L  
Sbjct: 645 SFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDL 704

Query: 325 ---------SQIWN------------RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
                    + IW             +M+  GC PNV  Y+ ++K LC+      A  L 
Sbjct: 705 NSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLF 764

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             M      P+    N+ +   C  G  + A++LLD M +Y  L ++ +Y  L+ GL   
Sbjct: 765 NHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQ 824

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
              ++A E+   +  CG   + V +  +L G+ R G V E  QL   M   G +L + T 
Sbjct: 825 GNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTH 884

Query: 484 NII 486
            ++
Sbjct: 885 TML 887



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 154/311 (49%), Gaps = 1/311 (0%)

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
           +HEA  + N +    F  +V +Y+ L   L   G +DE   +   M  +   PN+ +++ 
Sbjct: 136 SHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNT 195

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +++   K GN++ A   +  ++  G   +   YT ++   C+ +    A+ + E M  E 
Sbjct: 196 MVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEG 255

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C  N V++   I G C  G++D A++L  QMK+  C P++ TY  L+     V +  EA 
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +   E+ + GI+ N+ TY  ++   C+ G + E  ++L  ML +G     + FN +I  Y
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK+G + +AI +LD ++   +  P+  +Y  L+ G C    M  A   L KM    + PN
Sbjct: 376 CKRGMMEDAICVLDSMK-LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434

Query: 551 FATWNVLVRSL 561
             T+N L+  L
Sbjct: 435 LVTYNTLIHGL 445



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 194/437 (44%), Gaps = 71/437 (16%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
            F   V+ YN L   L +   I+E   L  +M++ G++PN+I+++T++++ C +GNV  +
Sbjct: 150 EFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVA 209

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
                                  K Y  G            +++ GF  +   Y++LI G
Sbjct: 210 -----------------------KAYFCG------------LMKFGFCCDSFTYTSLILG 234

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C    + +A  V   M +  C  N  +Y+ LI GF + G +  A +++ +M  +GC P+
Sbjct: 235 YCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPD 294

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT +V   C+     +A    E+M      PN  T+   I   C  G++D  M++L 
Sbjct: 295 VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL------- 452
            M +   + ++  +N L+DG  +   +++A  ++  ++   +  N  TYN ++       
Sbjct: 355 TMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKK 414

Query: 453 ----------------------------HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
                                       HG+C+A +V  A++L   M+ +G   D  TF 
Sbjct: 415 SMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFC 474

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
             I   CK GKV  A Q+ + ++       + + YT+L+ G C +    +A +  ++ML 
Sbjct: 475 AFIDCLCKMGKVEQAHQVFESLKEKHAEANEFL-YTALIDGYCKAEKFSDAHLLFKRMLF 533

Query: 545 EGICPNFATWNVLVRSL 561
           EG  PN  T+NVL+  L
Sbjct: 534 EGCFPNSITFNVLLDGL 550



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/409 (21%), Positives = 180/409 (44%), Gaps = 31/409 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    + + +K +    +E ++ ++I+ Y +      A  +F R+   G  P    +N
Sbjct: 485 KVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFN 544

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD L  E +      +   M +   +P V TY IL++ + + +  D A   L +M + 
Sbjct: 545 VLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS 604

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+ V+YT  + + C+ G++ EA E+ ++           +Y+ L+N      +++ A
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSA 664

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLC--------------------------DVGNVET 218
           F +L  M D G +P+  TYS ++  L                            + + E 
Sbjct: 665 FGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
              +  +M  +GC PN+++++ L+KG         A  L+N M   G  P+   +++L+ 
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
             C  G  +EA+ +   M E +   ++ +Y  L+ G  + GN   A +I+  ++S G + 
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           + V +  ++  L +     +   L + M    C  ++ T     + L G
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQELNG 893


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 252/476 (52%), Gaps = 6/476 (1%)

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
           +F  ++ + S M++  + P+V T+N+++ A  +   V+ A  L+  M +KG  P  V+Y 
Sbjct: 174 QFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYN 233

Query: 140 TIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           +++  + + G+ ++ARE+     A      V  +N LI G C+  ++EEA     EM  R
Sbjct: 234 SVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR 293

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
            + P+V+++S +I      G ++ +   L +M   G  P+   +T ++ G+   G   EA
Sbjct: 294 RVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEA 353

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             + + M+  G LP+VV Y+TL++GLC    + +A  +  +M+E   PP++ T++ LI G
Sbjct: 354 LRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHG 413

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           + + GN+  A Q ++ +      P++V Y  ++  +C+     +A+ L + M      PN
Sbjct: 414 YCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPN 473

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            VT++  I   C  G+VD A   LD+M     +PNI TYN ++ G  R   V +  + + 
Sbjct: 474 HVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLP 533

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++    +  +++TYNT++HG  + G + EAF LL  M  E  + DA+T+N+II  +   G
Sbjct: 534 KMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHG 593

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            +  A  +  ++ G     PD  +Y S++ G   +G  +++F    +ML +G+ P+
Sbjct: 594 NMQEADWVYKKM-GARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 236/467 (50%), Gaps = 6/467 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           E N +T NI++ + CK  +      ++ EM  +   PD V++  +V +  + G VE A  
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215

Query: 157 L-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L     +     G+  YN+++ GL +  + ++A  +   M   G+ P+V +++ +I   C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G +E +L    +M  R   P++ SF+ L+  +   G    A++    M   G +P+ V
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ +I G C  G M EA+ V  +M    C P+V TY+ L++G  K   L  A ++ N M
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G  P++  +T ++   C++    +A    + ++ +   P+ VT+NT I G+C  G +
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A +L D M   E  PN  TY+ L+D      +V  AF  + E+   GI  NI+TYN+I
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G CR+G V +  Q L KM  +    D IT+N +I+ Y K+GK++ A  LL +I     
Sbjct: 516 IKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL-KIMENEN 574

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             PD ++Y  ++ G    G MQEA    +KM   GI P+  T+  ++
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMI 621



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 231/449 (51%), Gaps = 5/449 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  +N ++DA            +  +M   G++P + TYN +LK L +N R D A ++
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVYNALINGLCK 177
              M   G APD  S+  ++   C+ G++EEA    +E+   R    V  ++ LI    +
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTR 311

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +++ A   L EM + G+ P+ + Y+ +I   C  G +  +L +  +M   GC P++ +
Sbjct: 312 RGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVT 371

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +LL G     R  +A +L N M   G  P++  ++TLIHG C +G++++A+     + 
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTIS 431

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    P++ TY+ LIDG  + G+L  A+++W+ M S    PN V Y+ ++   C+     
Sbjct: 432 DQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVD 491

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A + +++M  +   PN +T+N+ IKG C  G V    + L +M+  + +P++ TYN L+
Sbjct: 492 NAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLI 551

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            G ++  ++ EAF L+  +E   +Q + VTYN I+ G    G + EA  +  KM   G +
Sbjct: 552 HGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            D  T+  +I  +   G    + QL D +
Sbjct: 612 PDRYTYMSMINGHVVAGNSKKSFQLHDEM 640



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 229/450 (50%), Gaps = 7/450 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++++  R G  E A+ +   +   G+KP +  YN +L  LL   R+     ++  M   G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+V ++N+L+   C+   ++ A +   EM  +   PD VS++ ++    + G+++ A 
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319

Query: 156 EL--AMR-FG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           E    MR FG    GV +Y  +I G C+   + EA  +  EMV  G  P+V+TY+T+++ 
Sbjct: 320 EYLREMREFGLMPDGV-IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC    +  +  +L +M  RG  P++ +FT+L+ GY   G   +A   ++ +  +   P+
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+TLI G+C  G + +A  +   M      PN  TYS LID   + G +  A    +
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLD 498

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M++ G  PN++ Y  ++K  C++    +    + KM  +   P+ +T+NT I G    G
Sbjct: 499 EMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEG 558

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++  A  LL  M+     P+  TYN ++ G      ++EA  +  ++   GI+ +  TY 
Sbjct: 559 KMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYM 618

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           ++++G   AG   ++FQL  +ML +G   D
Sbjct: 619 SMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 219/446 (49%), Gaps = 5/446 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++      +++    L+  M  +G+      + SV+    R G  ++A ++F  +   G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V+ +N ++               Y  M+   + P+V +++ L+    +   +D A 
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
           + L EM   G  PD V YT ++   C+ G + EA   R+  + FG    V  YN L+NGL
Sbjct: 320 EYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++ +A  LL EM +RG+ P++ T++T+I   C  GN+E +L     +  +   P+I
Sbjct: 380 CKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDI 439

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ G    G   +A++LW+ M      PN V YS LI   C  G +D A +   +
Sbjct: 440 VTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN+ TY+++I G+ ++GN+    Q   +M  +   P+++ Y  ++    +   
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H+A +L++ M  EN  P+ VT+N  I G    G +  A  +  +M      P+  TY  
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMS 619

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGI 441
           +++G +     K++F+L  E+ + G+
Sbjct: 620 MINGHVVAGNSKKSFQLHDEMLQKGL 645



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 176/338 (52%), Gaps = 5/338 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            + E+D     L++M+  G+     ++  VI  + R GL  +AL++   +  FG  P V 
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVV 370

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN +L+ L  E R S    + + MK  G+ P++ T+  L+   C++  ++ A +    +
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKI 181
            ++   PD V+Y T++  +C+ G + +A EL     +         Y+ LI+  C++ ++
Sbjct: 431 SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQV 490

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + AF  L EMV++GI PN++TY++II   C  GNV      L +M      P++ ++ +L
Sbjct: 491 DNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTL 550

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + GY+  G+ HEA +L   M  E   P+ V Y+ +I G   +G+M EA  V  +M     
Sbjct: 551 IHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGI 610

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            P+  TY ++I+G   AGN   + Q+ + M+  G +P+
Sbjct: 611 EPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 149/274 (54%), Gaps = 5/274 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++  +   + LL +MK  GV      F ++I+ Y R G  E+AL+ F  I +  
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P +  YN ++D +  +      N ++ +M    + PN  TY+IL+ + C+  +VD A+
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAF 494

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGL 175
             L EM NKG  P+ ++Y +I+   C+ G V + ++    MR       +  YN LI+G 
Sbjct: 495 AFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGY 554

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            KE K+ EAF LL  M +  + P+ +TY+ IIS     GN++ +  +  +M  RG  P+ 
Sbjct: 555 VKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDR 614

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +++ S++ G+++ G + ++  L + M+++G  P+
Sbjct: 615 YTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 143/306 (46%), Gaps = 1/306 (0%)

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           D+ + ++     P    +  LI     +    EA      + ++  P      +AL+   
Sbjct: 75  DIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAAL 134

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
           ++AG     +  +  ++S+    N      MV   C+   F +  ++I +M      P+ 
Sbjct: 135 SRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDV 194

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT N  +      G V+ AM L+D M      P + TYN +L GLLR  R  +A E+   
Sbjct: 195 VTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRA 254

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           ++ CG+  ++ ++N ++ G CRAG + EA +   +M       D ++F+ +I  + ++G+
Sbjct: 255 MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGE 314

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           +++A + L  +R  G   PD + YT ++ G C +G M EA     +M+  G  P+  T+N
Sbjct: 315 MDHAAEYLREMREFG-LMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYN 373

Query: 556 VLVRSL 561
            L+  L
Sbjct: 374 TLLNGL 379


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 243/470 (51%), Gaps = 5/470 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP+  T   L+K +   N +  A +L  EM  KG   DA +Y  +++ +CK  +  
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 153 EARELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
            A +L  +        V  Y  +I+ LCK+    EA  +  EM+  GI P+V+ YS+++ 
Sbjct: 130 LAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            LC  G ++ +L    +M  RG + +++++ SL+ G    G   E +   N M+  GF P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +   ++ LI GLC  G + EA  +   M      P++ TY+ L++G    G L  A++++
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             +   G   NV +Y  ++   C++    +A  L E+M  +   P+TVT+NT I  LC  
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           GRV  A KL  +M+       ++TY  LLDGL +   ++EA +L   I+K   + NI  +
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           + +L G+CRAG + EA++   ++   G + D I +NI+I   C +G ++ A++LL ++  
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            G   PD I++  ++  +     + EA   L++M N    P+ A  ++L+
Sbjct: 490 KGCL-PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 254/494 (51%), Gaps = 9/494 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P       ++  +  EN       ++  M   G+  +  TY IL+  LCK  +   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 120 YKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSG----VSVYNALIN 173
            KL  +M GN  C  D  +Y  I+ S+CK G   EA ++ +   G+G    V VY++L++
Sbjct: 132 IKLHEKMKGN--CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLC+  +++EA     EM  RGI  +V TY+++I  L   G  +     L  M  RG +P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +FT L+ G    G+  EA  +   M  +G  P+++ Y+TL++GLC  G +++A  + 
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             + +     NV +Y+ LI+G+ K   +  A +++  M   G  P+ V Y  ++  LCQ+
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQS 369

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  L  +M          T+   + GLC  G ++ A+ L   +K+ E  PNI  +
Sbjct: 370 GRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVF 429

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + LLDG+ R  +++EA++   EI K G++ + + YN +++G+C  GM+ EA +LL +M  
Sbjct: 430 SILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G   D+ITFN+II    K+ +++ AIQLL+ +R    ++PD    + LL          
Sbjct: 490 KGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRN-FSPDEAVTSMLLCLASFDPQWH 548

Query: 534 EAFIYLQKMLNEGI 547
            A + L   L +G+
Sbjct: 549 AALVSLPNALQKGV 562



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 211/441 (47%), Gaps = 9/441 (2%)

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKI 181
            +G  PDAV+ TT+V  +     + +A +L         FG     Y  LINGLCK  K 
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDA-KTYGILINGLCKARKT 128

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
             A  L  E +      +V TY  II SLC  G    +L +  +M   G  P++  ++SL
Sbjct: 129 GLAIKL-HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    GR  EA + +  M   G   +V  Y++LIHGL   G   E       M +   
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  T++ LIDG  K G +  A QI   M   G  P+++ Y  ++  LC       A  
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L E +A      N  ++N  I G C   ++D A +L ++M+     P+  TYN L+  L 
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +  RV+ A +L  E++ CG  L + TY  +L G+C+ G + EA  L   +     K +  
Sbjct: 368 QSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIE 427

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            F+I++   C+ GK+  A +  D I   G   PD I+Y  L+ G+CN G + EA   L +
Sbjct: 428 VFSILLDGMCRAGKLEEAWKQFDEISKNG-LEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           M  +G  P+  T+NV++++L 
Sbjct: 487 MEEKGCLPDSITFNVIIQNLL 507



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 224/433 (51%), Gaps = 13/433 (3%)

Query: 12  DGVQYLLQQMKVEGV---SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           D VQ L  +M  +G+   + + G+ I+ +   R+ GLA   +K+  +++    K  V  Y
Sbjct: 95  DAVQ-LFDEMTEKGLFGDAKTYGILINGLCKARKTGLA---IKLHEKMKG-NCKGDVFTY 149

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             I+D+L  +   +    ++S M   G+ P+V  Y+ L+  LC+  R+  A +   EM  
Sbjct: 150 GMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 209

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAR-----ELAMRFGSGVSVYNALINGLCKEHKIEE 183
           +G + D  +Y +++  + + G  +E        +   F      +  LI+GLCKE K+ E
Sbjct: 210 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  +L  M  +G +P+++TY+T+++ LC VG +E +  +   +  RG   N+ S+  L+ 
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY    +  EA  L+  M  +G  P+ V Y+TLI  LC +G +  A  +  +M+      
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL 389

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            ++TY  L+DG  K G+L  A  ++  +      PN+  ++ ++  +C+     +A    
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++++     P+T+ +N  I GLC  G +  A+KLL QM++  CLP+  T+N ++  LL+ 
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509

Query: 424 NRVKEAFELVTEI 436
           N + EA +L+ E+
Sbjct: 510 NEIHEAIQLLEEM 522



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 182/348 (52%), Gaps = 5/348 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ S+++   R G  ++AL+ F  +   G+   V  YN ++  L     +  +    + M
Sbjct: 183 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 242

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G  P+ FT+ IL+  LCK  +V  A ++L  M +KG  PD ++Y T+++ +C +GQ+
Sbjct: 243 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQL 302

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E+A +L            V  YN LING CK+ KI+EAF L  EM  +G+ P+ +TY+T+
Sbjct: 303 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I +LC  G V T+  +  +M   G    + ++  LL G    G   EA DL+  + +   
Sbjct: 363 IGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEH 422

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN+  +S L+ G+C  G ++EA     ++ +N   P+   Y+ LI+G    G L  A +
Sbjct: 423 KPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVK 482

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +  +M   GC P+ + +  +++ L + N  H+A  L+E+M   N  P+
Sbjct: 483 LLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 171/340 (50%), Gaps = 3/340 (0%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG  P+  + T+L+KG  +     +A  L++ M  +G   +   Y  LI+GLC       
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ +  +M+ N C  +V TY  +ID   K G    A  +++ MI  G  P+VV Y+ ++ 
Sbjct: 131 AIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+     +A    ++M       +  T+N+ I GL   G        L+ M      P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +  T+  L+DGL +  +V EA +++  +   G + +I+TYNT+++G+C  G + +A +L 
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLF 309

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             +   G KL+  ++NI+I  YCK  K++ A +L + +R  G   P  ++Y +L+  +C 
Sbjct: 310 ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG-LKPSTVTYNTLIGALCQ 368

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           SG ++ A     +M   G     +T+ VL+  L  N GHL
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKN-GHL 407



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V + L  M   G S     F  +I+   + G   +A ++   +   G +P +  YN +++
Sbjct: 235 VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMN 294

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    +      ++ ++   G++ NVF+YNIL+   CK+ ++D A++L  EM  KG  P
Sbjct: 295 GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKP 354

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
             V+Y T++ ++C+ G+V  A++L +   +      +S Y  L++GLCK   +EEA  L 
Sbjct: 355 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLF 414

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             +      PN+  +S ++  +C  G +E +     ++   G  P+  ++  L+ G    
Sbjct: 415 QSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNK 474

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   EA  L  +M  +G LP+ + ++ +I  L     + EA+ +  +M   +  P+    
Sbjct: 475 GMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVT 534

Query: 309 SALI 312
           S L+
Sbjct: 535 SMLL 538



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 145/282 (51%), Gaps = 5/282 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   Q +L+ M  +G       + +++N    VG  E A K+F  + + G
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  V  YN +++    + +      ++  M+  G++P+  TYN L+ ALC++ RV  A 
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           KL VEM   G      +Y  ++  +CK G +EEA +L            + V++ L++G+
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+EEA+    E+   G++P+ I Y+ +I+ LC+ G +  ++ +L QM  +GC P+ 
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 496

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +F  +++  L     HEA  L   M    F P+    S L+
Sbjct: 497 ITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 239/448 (53%), Gaps = 17/448 (3%)

Query: 134 DAVSYTTIVSSICKLG--QVEEARELAMRFG---------SGVSVYNALINGLCKEHKIE 182
           DAVSY T+++++C+ G   + +AR L +            + VS Y  ++ GLC   +  
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVS-YTTVMRGLCASRRTG 140

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  LL  M   G+  +V+TY T+I  LCD   ++ +L +L +M   G  PN+  ++ LL
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           +GY   GR  +   ++  M R G  P+V+ ++ LI  LC  G   +A  V   M +    
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PNV TY+ LI+   K G++  A  +   M   G +P+VV Y  ++  L       +A S 
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 363 IEKMAFENC--PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +E+M   +    P+ VTFN+ I GLC  GR+  A+K+ + M +  C+ N+ TYN L+ G 
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           LRV++VK A  L+ E+   G++ +  TY+ +++G  +   V  A + L  M   G K + 
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
             +  ++ A C+QG +  A+ L + +        D I+Y++++ G C SG M+     +Q
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEM--DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQ 498

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHL 568
            ML+EG+ P+  T+++L+ ++++ LG L
Sbjct: 499 DMLDEGLAPDAVTYSMLI-NMYAKLGDL 525



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 230/465 (49%), Gaps = 9/465 (1%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P    Y  ++  L A  R      +  +M+  G+  +V TY  L++ LC  + +D A +
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLC 176
           LL EM   G  P+ V Y+ ++   C+ G+ ++      +++ R     V ++  LI+ LC
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE K  +A  +   MV RG++PNV+TY+ +I+SLC  G+V  +L +  +M  +G  P++ 
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           ++ +L+ G        EA      MI+   +  P+VV ++++IHGLC  G M +AV V  
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M E  C  N+ TY+ LI GF +   +  A  + + +  +G  P+   Y+ ++    +  
Sbjct: 360 MMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMW 419

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A   +  M           +   +  +C  G ++ AM L ++M +  C  +   Y+
Sbjct: 420 EVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYS 478

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++ G  +   +K   +L+ ++   G+  + VTY+ +++   + G + EA ++L +M   
Sbjct: 479 TMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTAS 538

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-EWNPDIIS 518
           G   D   F+ +I  Y  +G+ +  ++L+  +R     ++P IIS
Sbjct: 539 GFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIIS 583



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 206/409 (50%), Gaps = 8/409 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  E+D    LL +M   GV  +  V+  ++  Y R G  +   K+F  +   G
Sbjct: 164 LIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRG 223

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V ++  ++D L  E +      +   M + G+EPNV TYN+L+ +LCK   V  A 
Sbjct: 224 IKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREAL 283

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-------YNALIN 173
            L  EM +KG APD V+Y T+++ +  + +++EA         G +V       +N++I+
Sbjct: 284 TLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIH 343

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  ++ +A  +   M +RG   N++TY+ +I     V  V+ ++ ++ ++ + G  P
Sbjct: 344 GLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEP 403

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +++ L+ G+        A      M + G    +  Y  L+  +C  G M+ A+ + 
Sbjct: 404 DSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLF 463

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M++N C  +   YS +I G  K+G++    Q+   M+  G +P+ V Y+ ++ +  + 
Sbjct: 464 NEMDKN-CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKL 522

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
               +A  ++++M      P+   F++ IKG    G+ D  +KL+ +M+
Sbjct: 523 GDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMR 571



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 224/457 (49%), Gaps = 13/457 (2%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           + RR G   +A+ +   ++  G++  V  Y  ++  L   +       +   M   G++P
Sbjct: 135 ASRRTG---EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQP 191

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---R 155
           NV  Y+ LL+  C++ R     K+  +M  +G  PD + +T ++  +CK G+  +A   +
Sbjct: 192 NVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVK 251

Query: 156 ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           ++ ++ G    V  YN LIN LCKE  + EA  L  EM D+G+ P+V+TY+T+I+ L  V
Sbjct: 252 DMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGV 311

Query: 214 GNVETSLGILGQMFVRG---CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
             ++ ++  L +M ++G     P++ +F S++ G    GR  +A  +   M   G + N+
Sbjct: 312 LEMDEAMSFLEEM-IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNL 370

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ LI G      +  A+++  ++  +   P+  TYS LI+GF+K   +  A +    
Sbjct: 371 VTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCT 430

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G    +  Y  ++  +CQ  M  +A  L  +M  +NC  + + ++T I G C  G 
Sbjct: 431 MRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGD 489

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +    +L+  M      P+  TY+ L++   ++  ++EA  ++ ++   G   ++  +++
Sbjct: 490 MKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDS 549

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           ++ G    G   +  +L+ +M  +    D    + II
Sbjct: 550 LIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 208/444 (46%), Gaps = 8/444 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+  GV      + ++I         + AL++   +   G++P V +Y+ +L    
Sbjct: 145 LLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYC 204

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  ++ +M R G++P+V  +  L+  LCK  +   A K+   M  +G  P+ V
Sbjct: 205 RSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVV 264

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++S+CK G V EA  L            V  YN LI GL    +++EA   L EM
Sbjct: 265 TYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM 324

Query: 192 V--DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +  D  ++P+V+T++++I  LC +G +  ++ +   M  RGC  N+ ++  L+ G+L   
Sbjct: 325 IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVH 384

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +   A +L + +   G  P+   YS LI+G      +D A      M +      +  Y 
Sbjct: 385 KVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYI 444

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+    + G +  A  ++N M  N C  + +AY+ M+   C++        LI+ M  E
Sbjct: 445 PLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDE 503

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT++  I      G ++ A ++L QM     +P++  ++ L+ G     +  + 
Sbjct: 504 GLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKV 563

Query: 430 FELVTEIEKCGIQLNIVTYNTILH 453
            +L+ E+    +  +    +TI+ 
Sbjct: 564 LKLIHEMRAKNVAFDPKIISTIIR 587


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 244/446 (54%), Gaps = 15/446 (3%)

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRF-------GSGVSVYNALINGLCKEHKIEEA 184
           DAVSY T+++++C+ G  + A  L  AM          + VS Y  L+  LC +   ++A
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS-YTVLMRALCADRLADQA 134

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M   G+  +V+TY T+I  LCD   V+ ++ ++G+M   G  PN+  ++SLL+G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   GR  +   ++  M  +G  P+VV Y+ LI  LC  G   +A  V   M      PN
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY+ LI+   K G++  A  +  +M   G +P+VV Y  ++K L       +A  L+E
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314

Query: 365 KMAFEN--CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +M        PN VTFN+ I+GLC  GR+  A ++   M++  C+ N+ TYN L+ GLLR
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           V++V++A EL+ E+   G++ +  TY+ ++ G C+   V  A  LL  M   G + +   
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  ++ A C+QG +  A  L + +     +  D+++Y++++ G C +G ++ A   L+ +
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
           ++EG+ P+  T+++++ ++F+  G +
Sbjct: 493 VDEGLTPDAVTYSIVI-NMFAKSGDM 517



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 243/485 (50%), Gaps = 17/485 (3%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMG---NKGCAPDAVSYTTIVSSICK-------L 148
           +  +YN +L ALC+    D A  LL  M    +  C P+AVSYT ++ ++C        +
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 149 GQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           G +   R   +R  + V  Y  LI GLC   ++++A  L+ EM + GI+PNV+ YS+++ 
Sbjct: 136 GLLRSMRSAGVR--ADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G  E    +  +M  +G  P++  +T L+      G+  +A  + + M+R G  P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           NVV Y+ LI+ +C  GS+ EA+ V  +M E    P+V TY+ LI G +    +  A  + 
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 329 NRMI--SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
             M+   N   PNVV +  +++ LC      QA  +   M    C  N VT+N  I GL 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V  AM+L+D+M      P+  TY+ L+ G  ++ +V  A +L++ +   GI+  + 
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y  +L  +C  GM+  A  L  +M      LD + ++ +I+  CK G +  A +LL  I
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G   PD ++Y+ ++     SG M+ A   L++M   G  P+ A ++ L++  +S  G
Sbjct: 493 VDEG-LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQG-YSTKG 550

Query: 567 HLGPV 571
            +  V
Sbjct: 551 EINKV 555



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 231/444 (52%), Gaps = 10/444 (2%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           LA+QA+ +   +R  G++  V  Y  ++  L           +   M   G+EPNV  Y+
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRF 161
            LL+  CK+ R +   K+ VEM  KG  PD V YT ++ S+CK+G+ ++A    ++ +R 
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 162 G--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G    V  YN LIN +CKE  ++EA  +L +M ++G+ P+V+TY+T+I  L DV  ++ +
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 220 LGILGQMFVRGCN---PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +L +M VRG N   PN+ +F S+++G    GR  +A  +   M   G + N+V Y+ L
Sbjct: 310 MWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GL     + +A+ +  +M      P+  TYS LI GF K   +  A  + + M   G 
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P +  Y  ++  +C+  M  +A +L  +M   N P + V ++T I G C  G +  A +
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  +      P+  TY+ +++   +   ++ A  ++ ++   G   ++  +++++ G  
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDA 480
             G + +  +L+ +M+ +   LD+
Sbjct: 548 TKGEINKVLELIREMITKNIALDS 571



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 229/449 (51%), Gaps = 8/449 (1%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P    Y  ++ AL A+        +  +M+  G+  +V TY  L++ LC    VD A +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLC 176
           L+ EM   G  P+ V Y++++   CK G+ E+  ++ +          V +Y  LI+ LC
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  K ++A  ++  MV RG++PNV+TY+ +I+ +C  G+V+ ++G+L +M  +G  P++ 
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           ++ +L+KG        EA  L   M+R   +  PNVV ++++I GLC  G M +A  V  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            MEE  C  N+ TY+ LI G  +   +  A ++ + M S G  P+   Y+ ++K  C+  
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A  L+  M      P    +   +  +C  G ++ A  L ++M     L ++  Y+
Sbjct: 412 QVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYS 470

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++ G  +   +K A EL+  I   G+  + VTY+ +++   ++G +  A  +L +M   
Sbjct: 471 TMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           G   D   F+ +I  Y  +G++N  ++L+
Sbjct: 531 GFLPDVAVFDSLIQGYSTKGEINKVLELI 559



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 211/408 (51%), Gaps = 8/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  E+D    L+ +M   G+  +  V+ S++  Y + G  E   K+F  + E G
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V +Y  ++D+L    +    + +   M R G+EPNV TYN+L+  +CK   V  A 
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALIN 173
            +L +M  KG APD V+Y T++  +  + +++EA  L      G       V  +N++I 
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLC   ++ +AF +   M + G   N++TY+ +I  L  V  V  ++ ++ +M   G  P
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +++ L+KG+    +   A DL + M   G  P +  Y  L+  +C  G M+ A ++ 
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF 455

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +N+ P +V  YS +I G  KAG+L  A ++   ++  G +P+ V Y+ ++ +  ++
Sbjct: 456 NEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
                A+ ++++M      P+   F++ I+G    G ++  ++L+ +M
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 216/443 (48%), Gaps = 10/443 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+  GV      + ++I         ++A+++   + E G++P V +Y+ +L    
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  ++  M   G+EP+V  Y  L+ +LCK  +   A+ ++  M  +G  P+ V
Sbjct: 197 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV 256

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +CK G V+EA    ++++ +     V  YN LI GL    +++EA WLL EM
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 192 VDRG---IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
           V RG   + PNV+T++++I  LCD+G +  +  +   M   GC  N+ ++  L+ G L  
Sbjct: 317 V-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            +  +A +L + M   G  P+   YS LI G C    +D A  +   M +    P +  Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             L+    + G +  A  ++N M  N    +VVAY+ M+   C+      A  L++ +  
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E   P+ VT++  I      G ++ A  +L QM     LP++  ++ L+ G      + +
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK 554

Query: 429 AFELVTEIEKCGIQLNIVTYNTI 451
             EL+ E+    I L+    +T+
Sbjct: 555 VLELIREMITKNIALDSKIISTL 577


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 250/513 (48%), Gaps = 9/513 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            FG + +V   N +LD      R      +  N       P+V T+N+L+   C     +
Sbjct: 52  RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111

Query: 118 GAYKLLVEMG-NKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVSV--YNAL 171
            A+ ++ EM  + G AP   ++  ++  +CK G+V  A    E     G  + +  Y A+
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++ L K  KI++A  L+ ++   G  P + TY+ +++ LC +G +E ++ +L ++   GC
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P++ ++TSL+ G     R+ EA  L+  M   G + + V Y+ LI GL   G + +A S
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASS 291

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           V   M    C P+V T S +IDG  KAG +  A +I+  M + G +PN V Y+ ++  LC
Sbjct: 292 VYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 351

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +      A  ++ +M    C P+T+T+N  I GLC  G V+ A    D+M +  C P++ 
Sbjct: 352 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 411

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L+ G  +      A  +  ++       N+VTY T++ G+C+   + +A      M
Sbjct: 412 TYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHM 471

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
              G   D+  ++ ++   CK GK+     L D +   G  N    + T L++ +C +  
Sbjct: 472 KERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQ--TRTRLIFHLCKANR 529

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + EA      +  EG+ P+   +N ++ +L  +
Sbjct: 530 VDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKS 561



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 217/473 (45%), Gaps = 32/473 (6%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV+ S      V++   + G    A+  F      G    +  Y  I+D L    +    
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   +  +G  P + TYN LL  LCK  R++ A  LL ++ + GC PD V+YT+    
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS---- 240

Query: 145 ICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
                                     LI+GL KE +  EA+ L  EM  RG+  + + Y+
Sbjct: 241 --------------------------LIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYT 274

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +I  L   G +  +  +   M  +GC P++ + ++++ G    GR   A  ++  M   
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  PN V YS LIHGLC    MD A+ +  QM++  C P+  TY+ LIDG  K+G++  A
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 394

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
              ++ M+  GC P+V  Y  +V   C+      A  + + M+  +C PN VT+ T I G
Sbjct: 395 RAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISG 454

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   ++  A      MK+  C P+   Y+ L+DGL +  +++    L  E+E+ G+  N
Sbjct: 455 LCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-N 513

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             T   ++  +C+A  V EA  L   +  EG       +N II    K  KVN
Sbjct: 514 SQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISTLIKSAKVN 565



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 198/397 (49%), Gaps = 7/397 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  +I     L++++   G + +   + +++N   ++G  E+A+ +  +I + G
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L  E R      ++  M   G+  +   Y  L++ L +  ++  A 
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            +   M ++GC PD V+ +T++  +CK G++  A  +     A        VY+ALI+GL
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++ A  +L +M      P+ ITY+ +I  LC  G+VE +     +M   GC P++
Sbjct: 351 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 410

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  L+ G+   G T  A  +++ M      PNVV Y TLI GLC    + +A      
Sbjct: 411 YTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQH 470

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E  CPP+   YS+L+DG  K+G L G   +++ M  +G + N    T ++  LC+ N 
Sbjct: 471 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANR 529

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             +A SL   +  E   P+   +N+ I  L    +V+
Sbjct: 530 VDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKVN 565



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 6/169 (3%)

Query: 418 DGLLRVNRVKEAFELVTEIEKC------GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           D ++++ +  +  +L  E+ +C      G Q ++ T N +L    R     EA  LL   
Sbjct: 26  DAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNE 85

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           L      D  T+N++I  YC   +   A  ++  +       P + ++  +L G+C SG 
Sbjct: 86  LATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGK 145

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +  A  + +     G   +  T+  +V  L  N      V +++ I AN
Sbjct: 146 VLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITAN 194


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/571 (26%), Positives = 284/571 (49%), Gaps = 21/571 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + +L +M++ GV  SE  + +++N Y +      AL +   +R   +     +Y  +
Sbjct: 386 DEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTIL 445

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D        S    I   M  DG++P+V TY+ L+  +CK   +    ++L  M   G 
Sbjct: 446 IDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGV 505

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFW 186
            P+ V YTT+V   CK G  +EA +  +  + SG+     ++NAL+    +E  I EA  
Sbjct: 506 LPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ 565

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
               M    I  +V +++ II S C  GNV  +  +   M   G  P+I ++ SLL+G  
Sbjct: 566 FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLC 625

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
            GG   +A +    ++ +    +    +TL+ G+C +G++DEA+ +  +M   +  P+  
Sbjct: 626 QGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 685

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ L+DGF K G ++ A  +   M+  G  P+ +AYTC++  L        A  + +++
Sbjct: 686 TYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 745

Query: 367 -AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              E    + + +N+ + G    G+++   +L+  M + E  P+  +YN L+ G ++  +
Sbjct: 746 ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQ 805

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +     L  ++ K GI+ + VTY  ++ G+C  G++  A + L KM++EG   D + F+I
Sbjct: 806 LSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDI 865

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWN---------------PDIISYTSLLWGICNSG 530
           +I A+ ++ K++NA+QL   ++  G+ +               P  ++ +S++ G+C  G
Sbjct: 866 LIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCG 925

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            ++EA I    ++  G+ P  AT+  L+  L
Sbjct: 926 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGL 956



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 143/563 (25%), Positives = 274/563 (48%), Gaps = 23/563 (4%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            I   + +L +M+  GV  +  ++ +++  + + G A++ALK F  I   GL     I+N 
Sbjct: 490  IHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNA 549

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            +L +   E   +        M R  +  +V ++N ++ + C+   V  A+ +   M   G
Sbjct: 550  LLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHG 609

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEAF 185
              PD  +Y +++  +C+ G + +A+E  +              N L+ G+CK   ++EA 
Sbjct: 610  WPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEAL 669

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L  +MV R I P+  TY+ ++   C  G V  +L +L  M  +G  P+  ++T LL G 
Sbjct: 670  DLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGL 729

Query: 246  LLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            +  G+   AS ++  +I +EG   + +AY+++++G    G ++E   +   M EN   P+
Sbjct: 730  VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPS 789

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              +Y+ L+ G+ K G L     ++  M+  G  P+ V Y  ++  LC+  +   A   +E
Sbjct: 790  SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 849

Query: 365  KMAFENCPPNTVTFNTFIKGLCG----------------CGRVDWAMKLLDQMKQYECLP 408
            KM  E   P+ + F+  IK                     G +D A +L + MK    +P
Sbjct: 850  KMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVP 909

Query: 409  NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            +    + ++ GL +  +V+EA  + + I + G+   I T+ T++HG+C+   + +AF L 
Sbjct: 910  SEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLK 969

Query: 469  GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
              M   G K+D +T+N++I   C +  + +A+ L + ++  G   P+I +Y +L   +  
Sbjct: 970  QLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL-PNITTYITLTGAMYA 1028

Query: 529  SGGMQEAFIYLQKMLNEGICPNF 551
            +G MQ+    L+ + + GI P++
Sbjct: 1029 TGTMQDGEKLLKDIEDRGIVPSY 1051



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/621 (25%), Positives = 287/621 (46%), Gaps = 63/621 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISV------------------INSYRRVGLAEQALKMFYRIRE 58
           +L+ + + G SCS  +F S+                  +N+Y + G    A    + + E
Sbjct: 130 VLRHLALTGFSCS-AIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE 188

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G K ++   N+IL+AL+  N+   +              +V T NI+L +LC   ++  
Sbjct: 189 CGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSK 248

Query: 119 AYKLLVEMGNKGCA-PDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALI 172
           A  +L +M N  C  P+AV+Y TI++   K G+ + A R L     +G+      YN +I
Sbjct: 249 AESMLQKMKN--CRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI 306

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           + LCK  +   A+ LL  M +  + P+  +Y+T+I      G +  ++ I  QM  +   
Sbjct: 307 DKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLK 366

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ ++T+L+ GY   GRT EA  +   M   G  P+ + YS L++G C +  +  A+ +
Sbjct: 367 PSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDL 426

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              +   S   N T Y+ LIDGF + G +  A QI   M+++G  P+V+ Y+ ++  +C+
Sbjct: 427 IKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCK 486

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL-------------- 398
             M H+   ++ +M      PN V + T +   C  G    A+K                
Sbjct: 487 MGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVI 546

Query: 399 -----------------DQMKQY----ECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
                            +Q KQY    +   ++ ++N ++D   +   V EAF +   + 
Sbjct: 547 HNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 606

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G   +I TY ++L G+C+ G +V+A + +  +L +   +D  T N ++   CK G ++
Sbjct: 607 RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLD 666

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+ L +++       PD  +YT LL G C  G +  A I LQ ML +G+ P+   +  L
Sbjct: 667 EALDLCEKMVTRNIL-PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCL 725

Query: 558 VRSLFSNLGHLGPVYILDDIM 578
           +  L +        Y+  +I+
Sbjct: 726 LNGLVNEGQVKAASYMFQEII 746



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/604 (24%), Positives = 277/604 (45%), Gaps = 79/604 (13%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++N Y + G  + AL++   + + G++  +  YN ++D L    R +    +   M+  
Sbjct: 269 TILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREV 328

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + P+  +YN L+       +++ A  +  +M  +   P   +YT ++   C+ G+ +EA
Sbjct: 329 NLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEA 388

Query: 155 RELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           R +      +GV      Y+AL+NG CK  K+  A  L+  +  R I  N   Y+ +I  
Sbjct: 389 RRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDG 448

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C +G V  +  IL  M   G +P++ ++++L+ G    G  HE  ++ +RM + G LPN
Sbjct: 449 FCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPN 508

Query: 270 VVAYSTLIHGLCSNGSMDEAV-----------------------------------SVSY 294
            V Y+TL+   C  G   EA+                                       
Sbjct: 509 NVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQ 568

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M       +V +++ +ID + + GN+L A  +++ M+ +G  P++  Y  +++ LCQ  
Sbjct: 569 YMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGG 628

Query: 355 MFHQAH-----------------------------------SLIEKMAFENCPPNTVTFN 379
              QA                                     L EKM   N  P+T T+ 
Sbjct: 629 HLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYT 688

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-K 438
             + G C  G+V  A+ LL  M +   +P+   Y  LL+GL+   +VK A  +  EI  K
Sbjct: 689 ILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 748

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  + + YN++++G  + G + E  +L+  M        + ++NI+++ Y K+G+++ 
Sbjct: 749 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 808

Query: 499 AIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            + L  D ++ G    PD ++Y  L++G+C  G ++ A  +L+KM+ EG+ P+   +++L
Sbjct: 809 TLYLYRDMVKEG--IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDIL 866

Query: 558 VRSL 561
           +++ 
Sbjct: 867 IKAF 870



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +IDG   L + MK  GV  SE    S++    + G  E+A+ +F  I   G+ PT+  + 
Sbjct: 891  DIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFT 950

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++  L  E +      +   M+  G++ +V TYN+L+  LC    +  A  L  EM +K
Sbjct: 951  TLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSK 1010

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEAREL 157
            G  P+  +Y T+  ++   G +++  +L
Sbjct: 1011 GLLPNITTYITLTGAMYATGTMQDGEKL 1038



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 20/219 (9%)

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y   V +L Q  M  QA S++  +A      + + F++ ++ +  C              
Sbjct: 111 YCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAI-FSSLLRTISRCDPT----------- 158

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                 N+ + + L++  ++  +V +A   +  +++CG + ++ + N IL+ +       
Sbjct: 159 ------NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSE 212

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
             +  L + L     LD  T NI++ + C QGK++ A  +L +++      P+ ++Y ++
Sbjct: 213 YVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL--PNAVTYNTI 270

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L      G  + A   L  M   GI  +  T+N+++  L
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 173/616 (28%), Positives = 284/616 (46%), Gaps = 91/616 (14%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL----LAENR 80
           GV+  E  + +++  + R+   E AL++ + +   G  P+    + ++D L    L E  
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           FS+       +   GM PNVF YN L+  LCKN R D A +L  EM  +G  P+ V+Y  
Sbjct: 323 FSLA----CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 141 IVSSICKLGQVEEAREL--AMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDR 194
           ++ ++CK G +E+A  L   MR   G+ V    YN+LING CK+  ++ A  LL  MV  
Sbjct: 379 LIHALCKRGMIEDALCLFDKMR-DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P   +YS +I+ LC  G++ + + +  +M  RG   N ++FT+L+ G+    +  EA
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID- 313
           + L+++MI    +PN V ++ +I G C  G++ +A  +  QM E    P+  TY +LI  
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 314 ----------------------------------GFAKAGNLLGASQIWNRMI------- 332
                                             GF + G       +W+ M        
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 333 ----------------------------SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
                                         G  P+ + YTCM+  L +     QA +  +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   PNTVT    I  LC  G +  A  L  +M     LPN  TYN  LD      
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +++A +L + + + G   +IV++N ++ G+C+AG + EA  L+ K+   G   D I+++
Sbjct: 738 DMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYS 796

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL-WGICN-SGGMQEAFIYLQKM 542
            II+  CK G +N A +L + +   G   PD+++Y   + W  CN  G   +A      M
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLYKG-LKPDVVAYNIFIRW--CNVHGESDKALGIYTNM 853

Query: 543 LNEGICPNFATWNVLV 558
           +  G+ PN+ T+  L+
Sbjct: 854 IRSGVQPNWDTYRALL 869



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 277/532 (52%), Gaps = 9/532 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+KL +    D    L ++M   G+  +E  +  +I++  + G+ E AL +F ++R+ G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K TV  YN +++    +        + S M ++G+ P   +Y+ L+  LC+N  +    
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGL 175
           +L  EM  +G A +  ++T +++  CK  +++EA  L  +   S V      +N +I G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I +AF L  +MV+ G+ P+  TY ++IS LC    V  +   +  +       N 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S T+LL G+   GR  E   LW+ M   G   ++V+++ +++        +++  +  +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E    P+   Y+ +ID  +K  N++ A   W++M+ +G SPN V +T ++  LC++  
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M   N  PN  T+N F+      G ++ A  L   M Q   L +I ++N 
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNI 762

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +  +++EA +L+++I + G   + ++Y+TI+H +C+ G + +AF+L  +ML +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGI 526
            K D + +NI I      G+ + A+ +  + IR G + N D  +Y +LL GI
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD--TYRALLSGI 872



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 268/570 (47%), Gaps = 27/570 (4%)

Query: 23  VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV-------------KIYN 69
           V G+S S G+    +N Y     A Q L    +IR+F L   +              +Y 
Sbjct: 150 VLGLSLSSGI---TVNQYT----ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYT 202

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             + A            +   M+ +G++ +   YN+L+  LCKN RV  A ++   M N 
Sbjct: 203 AGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNI 262

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSVYNA--LINGLCKEHKIEEA 184
           G   D V+Y T+V   C++ ++E A  +    +R G   S  N   +I+ L K+  +EEA
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L C++ D G+ PNV  Y+ +I  LC     + +  +  +M  RG  PN  ++  L+  
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   +A  L+++M  +G    V  Y++LI+G C  GS+D A  +   M +    P 
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +YS LI G  + G+L    ++   M   G + N   +T ++   C++    +A  L +
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM   N  PN VTFN  I+G C  G +  A +L DQM +    P+  TY  L+ GL   +
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V +A E V ++E     LN  +   +L+G  R G   E + L  +M + G KLD ++F 
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           II+YA  KQ     +  L   ++  G   PD I YT ++  +     M +A     +M+ 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGV-KPDDIFYTCMIDALSKEENMIQALNCWDQMVV 681

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +G  PN  T  VL+ +L  + G+LG   +L
Sbjct: 682 DGYSPNTVTHTVLINNLCKS-GYLGSAELL 710



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 265/544 (48%), Gaps = 6/544 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   GV   E V+ + I +Y      + A  +  R+   G+K +   YN ++  L 
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 244

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      + + M   G+  +  TY  L+   C+   ++ A ++  +M   G  P   
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 304

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + + ++  + K   VEEA  LA + G       V  YNALI+ LCK  + ++A  L  EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG++PN +TY+ +I +LC  G +E +L +  +M  +G    ++ + SL+ GY   G  
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L + M++EG  P   +YS LI GLC NG +   + +  +M E     N  T++AL
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+GF K   +  A++++++MI +   PN V +  M++  C      +A  L ++M     
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+ + I GLC    V  A + +  ++    + N  +   LL G  R  R  E + 
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+   G++L++V++  I++   +     ++  L  +M  +G K D I +  +I A  
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+  +  A+   D++   G ++P+ +++T L+  +C SG +  A +  ++ML   + PN 
Sbjct: 665 KEENMIQALNCWDQMVVDG-YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 552 ATWN 555
            T+N
Sbjct: 724 FTYN 727



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 4/385 (1%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI  N  T S I+ SL  +     +  +  +M   G + + + +T+ ++ Y        A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L  RM  EG   + V Y+ L++GLC N  + EAV V   M       +  TY  L+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           F +   L  A +I + MI  G  P+    + M+  L +  +  +A SL  K+      PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
              +N  I  LC   R D A +L  +M      PN  TY  L+  L +   +++A  L  
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++   GI++ +  YN++++G C+ G +  A  LL  M+ EG    A +++ +I   C+ G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 495 KVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            +++ ++L   +   G  WN    ++T+L+ G C    M EA     KM++  + PN  T
Sbjct: 458 DLSSCMELHREMAERGIAWNN--YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIM 578
           +NV++   +  +G++   + L D M
Sbjct: 516 FNVMIEG-YCLVGNIRKAFQLYDQM 539



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 39/305 (12%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M V GV      F  ++ +  +    E++  +F  ++E G+KP    Y  ++DAL
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E         +  M  DG  PN  T+ +L+  LCK+  +  A  L  EM      P+ 
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 136 VSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEM 191
            +Y   +      G +E+A++L  AM  G   S+  +N LI GLCK  KI+EA  L+ ++
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKI 783

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G  P+ I+YSTII  LC +G++                                   
Sbjct: 784 TESGFSPDCISYSTIIHELCKMGDI----------------------------------- 808

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A +LWN M+ +G  P+VVAY+  I     +G  D+A+ +   M  +   PN  TY AL
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 312 IDGFA 316
           + G +
Sbjct: 869 LSGIS 873


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 246/491 (50%), Gaps = 8/491 (1%)

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKAL---CKNNRVDGAYKLLVEMGNKGCAPDA 135
           N  + IN   S++ +       F    LLK+L   CK    + +   L  + NKG  PD 
Sbjct: 33  NETTNINRTLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDV 92

Query: 136 VSYTTIVSSICKLGQVEEARE----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           V  T ++  +     +++A +    L       +  YNA+I G C+ ++I+ A+ +L  M
Sbjct: 93  VLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRM 152

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            ++G  P+++TY+ +I SLC  G ++++L    Q+    C P + ++T L++  LL G  
Sbjct: 153 KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGI 212

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L + M+     P++  Y+++I G+C  G +D A  +   +      P+V TY+ L
Sbjct: 213 DEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNIL 272

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G    G      ++ + M++ GC  NVV Y+ ++  +C++    +   L++ M  +  
Sbjct: 273 LRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGL 332

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+   ++  I  LC  GRVD A+++LD M    C+P+I  YN +L  L +  R  EA  
Sbjct: 333 KPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALS 392

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++ + G   N  +YN++   +   G  V A  ++ +ML +G   D IT+N +I   C
Sbjct: 393 IFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLC 452

Query: 492 KQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           + G V+ AI+LL D      E  P ++SY  +L G+C    + +A   L  M+++G  PN
Sbjct: 453 RDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPN 512

Query: 551 FATWNVLVRSL 561
             T+  L+  +
Sbjct: 513 ETTYTFLIEGI 523



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 233/468 (49%), Gaps = 8/468 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G   ++L     +   G KP V +   ++  L           +   ++  G  P++ 
Sbjct: 69  KAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLI 127

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            YN ++   C+ NR+D AY++L  M NKG +PD V+Y  ++ S+C  G ++ A E   + 
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   V  Y  LI     +  I+EA  LL EM++  + P++ TY++II  +C  G V
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  I+  +  +G  P++ ++  LL+G L  G+     +L + M+  G   NVV YS L
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  +C +G ++E V +   M++    P+   Y  LI    K G +  A ++ + MIS+GC
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGC 367

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  ++  LC+     +A S+ EK+    C PN  ++N+    L   G    A+ 
Sbjct: 368 VPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALG 427

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT--EIEKCGIQLNIVTYNTILHG 454
           ++ +M      P+  TYN L+  L R   V EA EL+   E+E    + ++V+YN +L G
Sbjct: 428 MILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLG 487

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +C+   V +A ++L  M+ +G + +  T+  +I      G +N+A  L
Sbjct: 488 LCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 226/456 (49%), Gaps = 15/456 (3%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+++ + +   G  P +  YN I+      NR      +   MK  G  P++ TYNIL
Sbjct: 109 DKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNIL 167

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRF 161
           + +LC    +D A +   ++  + C P  V+YT ++ +    G ++EA +     L +  
Sbjct: 168 IGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINL 227

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              +  YN++I G+C+E  ++ AF ++  +  +G  P+VITY+ ++  L + G  E    
Sbjct: 228 QPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYE 287

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++  M  RGC  N+ +++ L+      G+  E   L   M ++G  P+   Y  LI  LC
Sbjct: 288 LMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALC 347

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +D A+ V   M  + C P++  Y+ ++    K      A  I+ ++   GCSPN  
Sbjct: 348 KEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNAS 407

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD-- 399
           +Y  M   L       +A  +I +M  +   P+ +T+N+ I  LC  G VD A++LL   
Sbjct: 408 SYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M+  EC P++ +YN +L GL +V+RV +A E++  +   G + N  TY  ++ G+   G
Sbjct: 468 EMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGG 527

Query: 460 MVVEAFQLLGKMLIEGTKLDAI---TFNIIIYAYCK 492
            + +A  L   ++     +DAI   +F  +   +CK
Sbjct: 528 CLNDARDLATTLV----NMDAISEHSFERLYKTFCK 559



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 212/409 (51%), Gaps = 7/409 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  + R    + A ++  R++  G  P +  YN ++ +L +           + + ++
Sbjct: 131 AIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKE 190

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             +P V TY IL++A      +D A KLL EM      PD  +Y +I+  +C+ G V+ A
Sbjct: 191 NCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRA 250

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            ++     +  +   V  YN L+ GL  + K E  + L+ +MV RG + NV+TYS +ISS
Sbjct: 251 FQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISS 310

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +C  G VE  +G+L  M  +G  P+ + +  L+      GR   A ++ + MI +G +P+
Sbjct: 311 VCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPD 370

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC     DEA+S+  ++ E  C PN ++Y+++       G+ + A  +  
Sbjct: 371 IVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMIL 430

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--CPPNTVTFNTFIKGLCG 387
            M+  G  P+ + Y  ++  LC++ M  +A  L+  M  E+  C P+ V++N  + GLC 
Sbjct: 431 EMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCK 490

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
             RV  A+++L  M    C PN TTY  L++G+     + +A +L T +
Sbjct: 491 VSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 187/361 (51%), Gaps = 3/361 (0%)

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +S  C  GN   SL  L  +  +G  P++   T L+ G        +A  + + +   G 
Sbjct: 64  LSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH 123

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+++AY+ +I G C    +D A  V  +M+     P++ TY+ LI      G L  A +
Sbjct: 124 -PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
             N+++   C P VV YT +++         +A  L+++M   N  P+  T+N+ I+G+C
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G VD A +++  +      P++ TYN LL GLL   + +  +EL++++   G + N+V
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY+ ++  VCR G V E   LL  M  +G K D   ++ +I A CK+G+V+ AI++LD +
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G   PDI++Y ++L  +C      EA    +K+   G  PN +++N +  +L+S  G
Sbjct: 363 ISDG-CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWST-G 420

Query: 567 H 567
           H
Sbjct: 421 H 421



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 173/331 (52%), Gaps = 11/331 (3%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  ++A+K+   + E  L+P +  YN I+  +  E        I S++   G  P+V TY
Sbjct: 210 GGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITY 269

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-G 162
           NILL+ L    + +  Y+L+ +M  +GC  + V+Y+ ++SS+C+ G+VEE   L      
Sbjct: 270 NILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKK 329

Query: 163 SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G+      Y+ LI  LCKE +++ A  +L  M+  G  P+++ Y+TI++ LC     + 
Sbjct: 330 KGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADE 389

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L I  ++   GC+PN  S+ S+       G    A  +   M+ +G  P+ + Y++LI 
Sbjct: 390 ALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLIS 449

Query: 279 GLCSNGSMDEAVS--VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
            LC +G +DEA+   V  +ME + C P+V +Y+ ++ G  K   +  A ++   M+  GC
Sbjct: 450 CLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGC 509

Query: 337 SPNVVAYTCMVKVL----CQNNMFHQAHSLI 363
            PN   YT +++ +    C N+    A +L+
Sbjct: 510 RPNETTYTFLIEGIGFGGCLNDARDLATTLV 540



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 81/151 (53%), Gaps = 2/151 (1%)

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           E+   +  +   G + ++V    ++HG+  +  + +A Q++  +   G   D I +N II
Sbjct: 75  ESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHP-DLIAYNAII 133

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             +C+  ++++A Q+LDR++  G ++PDI++Y  L+  +C+ G +  A  +  ++L E  
Sbjct: 134 TGFCRANRIDSAYQVLDRMKNKG-FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENC 192

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
            P   T+ +L+ +     G    + +LD+++
Sbjct: 193 KPTVVTYTILIEATLLQGGIDEAMKLLDEML 223


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/532 (25%), Positives = 272/532 (51%), Gaps = 8/532 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  +      P++  ++    A+    +F+++      ++ +G+  N++T NI+
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----- 161
           +   C+  +   AY +L ++   G  PD  ++ T++  +   G+V EA  L  R      
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN+++NG+C+      A  LL +M +R +  +V TYSTII SLC  G ++ ++ 
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  +G   ++ ++ SL++G    G+ ++ + L   M+    +PNV+ ++ L+    
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA  +  +M      PN+ TY+ L+DG+     L  A+ + + M+ N CSP++V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +T ++K  C          +   ++      N VT++  ++G C  G++  A +L  +M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
             +  LP++ TY  LLDGL    ++++A E+  +++K  + L IV Y TI+ G+C+ G V
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A+ L   +  +G K + +T+ ++I   CK+G ++ A  LL ++   G   P+  +Y +
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA-PNDCTYNT 548

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           L+      G +  +   +++M + G   + ++  +++  L S  G L   ++
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS--GELDKSFL 598



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 244/474 (51%), Gaps = 5/474 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +Q+++ G++ +      +IN + R      A  +  ++ + G +P    +N ++  L  E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            + S    +   M  +G +P+V TYN ++  +C++     A  LL +M  +    D  +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231

Query: 139 TTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +TI+ S+C+ G ++ A    +E+  +   S V  YN+L+ GLCK  K  +   LL +MV 
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I PNVIT++ ++      G ++ +  +  +M  RG +PNI ++ +L+ GY +  R  E
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+++ + M+R    P++V +++LI G C    +D+ + V   + +     N  TYS L+ 
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF ++G +  A +++  M+S+G  P+V+ Y  ++  LC N    +A  + E +       
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDL 471

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
             V + T I+G+C  G+V+ A  L   +      PN+ TY  ++ GL +   + EA  L+
Sbjct: 472 GIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            ++E+ G   N  TYNT++    R G +  + +L+ +M   G   DA +  ++I
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 208/402 (51%), Gaps = 1/402 (0%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K ++A  L  EM+     P+++ +S   S++         L    Q+ + G   NI++  
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++  +    +T  A  +  ++++ G+ P+   ++TLI GL   G + EAV +  +M EN
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C P+V TY+++++G  ++G+   A  +  +M       +V  Y+ ++  LC++     A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL ++M  +    + VT+N+ ++GLC  G+ +    LL  M   E +PN+ T+N LLD 
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
            ++  +++EA EL  E+   GI  NI+TYNT++ G C    + EA  +L  M+      D
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TF  +I  YC   +V++ +++   I   G    + ++Y+ L+ G C SG ++ A    
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRG-LVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           Q+M++ G+ P+  T+ +L+  L  N      + I +D+  +K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 211/410 (51%), Gaps = 5/410 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G       + S++N   R G    AL +  ++ E  +K  V  Y+ I+D+L 
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLC 239

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        ++  M+  G++ +V TYN L++ LCK  + +    LL +M ++   P+ +
Sbjct: 240 RDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVI 299

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           ++  ++    K G+++EA EL       G+S     YN L++G C ++++ EA  +L  M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V     P+++T++++I   C V  V+  + +   +  RG   N  +++ L++G+   G+ 
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L+  M+  G LP+V+ Y  L+ GLC NG +++A+ +   ++++     +  Y+ +
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  K G +  A  ++  +   G  PNV+ YT M+  LC+     +A+ L+ KM  +  
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            PN  T+NT I+     G +  + KL+++MK      + ++   ++D LL
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 176/345 (51%), Gaps = 5/345 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L ++M+ +G+  S   + S++    + G       +   +    + P V  +N 
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +LD  + E +    N +Y  M   G+ PN+ TYN L+   C  NR+  A  +L  M    
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
           C+PD V++T+++   C + +V++     R ++ R   +    Y+ L+ G C+  KI+ A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EMV  G+ P+V+TY  ++  LCD G +E +L I   +     +  I  +T++++G 
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
             GG+  +A +L+  +  +G  PNV+ Y+ +I GLC  GS+ EA  +  +MEE+   PN 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            TY+ LI    + G+L  ++++   M S G S +  +   ++ +L
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 177/376 (47%), Gaps = 8/376 (2%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS-------FTSLLK 243
           M+ R I  N+     I   L   G++ T L      F   C  +  S       F   L+
Sbjct: 2   MIKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLR 61

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
             ++  +  +A  L+  MIR   LP++V +S     +      +  +    Q+E N    
Sbjct: 62  SGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N+ T + +I+ F +      A  +  +++  G  P+   +  ++K L       +A  L+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M    C P+ VT+N+ + G+C  G    A+ LL +M++     ++ TY+ ++D L R 
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +  A  L  E+E  GI+ ++VTYN+++ G+C+AG   +   LL  M+      + ITF
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N+++  + K+GK+  A +L   +   G  +P+II+Y +L+ G C    + EA   L  M+
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRG-ISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360

Query: 544 NEGICPNFATWNVLVR 559
                P+  T+  L++
Sbjct: 361 RNKCSPDIVTFTSLIK 376


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 263/504 (52%), Gaps = 7/504 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  +N IL +L    ++     +   M+  G+  N  T NIL+   C   ++  ++ +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
           L ++   G  PD ++  T++  +C  G+V+++     + +A  F      Y  L+NGLCK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +   A  LL  + DR   PNV+ Y+TII  LC    V  +  +  +M  RG  P+  +
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +T+L+ G+ L G+   A  L + MI +   P V  Y+ LI+ LC  G++ EA ++   M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    P V TYS L+DG+   G +  A QI++ M+  G +PNV +Y  M+  LC+     
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A +L+ +M  +N  P+TVT+N+ I GLC  GR+  A+ L+++M       ++ TY  LL
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L +   + +A  L  ++++ GIQ  + TY  ++ G+C+ G +  A +L   +L++G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           +D  T+ ++I   CK+G  + A+ +  ++   G   P+ +++  ++  +       +A  
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG-CIPNAVTFEIIIRSLFEKDENDKAEK 486

Query: 538 YLQKMLNEGICP-NFATWNVLVRS 560
            L +M+ +G+   +F   +V V++
Sbjct: 487 LLHEMIAKGLLVLDFKVADVFVQN 510



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 227/464 (48%), Gaps = 5/464 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM+V+G+  +      +IN +  +G    +  +  +I + G +P     N ++  L 
Sbjct: 32  LSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLC 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +         +  +   G + +  +Y  LL  LCK      A KLL  + ++   P+ V
Sbjct: 92  LKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVV 151

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y TI+  +CK   V EA +L     +         Y  LI G C   ++  AF LL EM
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEM 211

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I+P V  Y+ +I++LC  GNV+ +  +L  M   G  P + ++++L+ GY L G  
Sbjct: 212 ILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEV 271

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +++ M++ G  PNV +Y+ +I+GLC    +DEA+++  +M   +  P+  TY++L
Sbjct: 272 QNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 331

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +  A  + N M   G   +VV YT ++  LC+N    +A +L  KM     
Sbjct: 332 IDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P   T+   I GLC  GR+  A +L   +    C  ++ TY  ++ GL +     EA  
Sbjct: 392 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 451

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           + +++E  G   N VT+  I+  +       +A +LL +M+ +G
Sbjct: 452 IKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 204/399 (51%), Gaps = 5/399 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K E+    +   ++  +G       + +++N   ++G    A+K+   I +   +P V +
Sbjct: 93  KGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVM 152

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN I+D L  +   +    +YS M   G+ P+  TY  L+   C   ++ GA+ LL EM 
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI 212

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIE 182
            K   P    Y  +++++CK G V+EA+ L           GV  Y+ L++G C   +++
Sbjct: 213 LKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQ 272

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  +   MV  G++PNV +Y+ +I+ LC    V+ ++ +L +M  +   P+  ++ SL+
Sbjct: 273 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 332

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    GR   A +L N M   G   +VV Y++L+  LC N ++D+A ++  +M+E    
Sbjct: 333 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P + TY+ALIDG  K G L  A +++  ++  GC  +V  YT M+  LC+  MF +A ++
Sbjct: 393 PTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 452

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             KM    C PN VTF   I+ L      D A KLL +M
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 208/405 (51%), Gaps = 1/405 (0%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L +R    +  +N ++  L K  +   A  L  +M  +GI  N +T + +I+  C +G +
Sbjct: 2   LLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQM 61

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             S  +LG++   G  P+  +  +L+KG  L G   ++    ++++ +GF  + V+Y TL
Sbjct: 62  AFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTL 121

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++GLC  G    AV +   +E+ S  PNV  Y+ +IDG  K   +  A  +++ M + G 
Sbjct: 122 LNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ + YT ++   C       A SL+++M  +N  P    +N  I  LC  G V  A  
Sbjct: 182 FPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKN 241

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  M +    P + TY+ L+DG   V  V+ A ++   + + G+  N+ +YN +++G+C
Sbjct: 242 LLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC 301

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +   V EA  LL +ML +    D +T+N +I   CK G++ +A+ L++ +   G+   D+
Sbjct: 302 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQ-PADV 360

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++YTSLL  +C +  + +A     KM   GI P   T+  L+  L
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 186/374 (49%), Gaps = 15/374 (4%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P +I ++ I+ SL  +    T++ +  QM V+G   N  +   L+  +   G+   +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSM-------DEAVSVSYQMEENSCPPNVTTYSA 310
             ++++ G+ P+ +  +TL+ GLC  G +       D+ V+  +QM+         +Y  
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDH-------VSYGT 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L++G  K G    A ++   +      PNVV Y  ++  LC++ + ++A+ L  +M    
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ +T+ T I G C  G++  A  LLD+M      P +  YN L++ L +   VKEA 
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAK 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L+  + K GI+  +VTY+T++ G C  G V  A Q+   M+  G   +  ++NI+I   
Sbjct: 241 NLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGL 300

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK  +V+ A+ LL R        PD ++Y SL+ G+C SG +  A   + +M + G   +
Sbjct: 301 CKCKRVDEAMNLL-REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359

Query: 551 FATWNVLVRSLFSN 564
             T+  L+ +L  N
Sbjct: 360 VVTYTSLLDALCKN 373



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 5/272 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  +   + LL  M  EG+      + ++++ Y  VG  + A ++F+ + + G
Sbjct: 226 LINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN +++ L    R      +   M    M P+  TYN L+  LCK+ R+  A 
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
            L+ EM ++G   D V+YT+++ ++CK   +++A  L M+    G+      Y ALI+GL
Sbjct: 346 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++ A  L   ++ +G   +V TY+ +IS LC  G  + +L I  +M   GC PN 
Sbjct: 406 CKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNA 465

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +F  +++         +A  L + MI +G L
Sbjct: 466 VTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 147/475 (30%), Positives = 247/475 (52%), Gaps = 14/475 (2%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           L AL     +D A +L VE   +   PDA     +V  +C+ G+ ++A  +    G   +
Sbjct: 78  LSALVHRGDLDAALRL-VESSPR--PPDAALANRLVRDLCRRGRPDDAERVVGACGPAAT 134

Query: 167 V--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  Y AL +G C+  ++ +A  ++  M    + PN  TY+ +I +LC+ G V  +L +L 
Sbjct: 135 VVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLD 191

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M  RGC P++ ++  LL+    G    +A +L + M  EG  PN V Y+ L+ G+C  G
Sbjct: 192 DMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEG 251

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D+A+ +   +  + C P+   Y+ ++ G   A     A ++   M+   C PN   + 
Sbjct: 252 DVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFN 311

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC+  +  QA  L+EKM+   C  N VT+N  I GLC    VD AM LL +MK Y
Sbjct: 312 VVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY 371

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C P+I TYN LL GL    +  +A EL+  + + G   + VT+NT++  +C+ G++V+A
Sbjct: 372 GCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDA 431

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            ++  +M  +G   ++IT++ II    K  K++ A++L + + G   +NPD I Y  L  
Sbjct: 432 IEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM-GHKGFNPDKI-YQLLAE 489

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
            + +   ++EA   ++K+ + GI P+   +N ++  L  N    G      DIMA
Sbjct: 490 CLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRN----GKTEFAIDIMA 540



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 225/449 (50%), Gaps = 9/449 (2%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G   TV  Y  + D      R      +   M    ++PN +TYN L+  LC+  +V  A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDA 186

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALING 174
             +L +M  +GCAPD V+Y  ++ + CK     +A EL  +    G +     YN L++G
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +C E  +++A  LL  +   G  P+ + Y+T++  LC       +  ++ +M    C PN
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +F  ++      G   +A  L  +M + G   N+V Y+ +I+GLC   ++D A+ +  
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+   C P++ TY+ L+ G   A   + A ++ + M  NGC P+ V +  ++  LCQ  
Sbjct: 367 KMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKG 426

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +   A  + ++M  + C PN++T++T I GL    ++D A++L ++M      P+   Y 
Sbjct: 427 LMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQ 485

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L + L   + ++EA + V +++  GI  + V YN IL G+CR G    A  ++  M+  
Sbjct: 486 LLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSS 545

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           G   D +T+ I+I     +G +N A +LL
Sbjct: 546 GCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 213/410 (51%), Gaps = 6/410 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            +  +I++    G    AL +   +   G  P V  YN +L+A      +     +   M
Sbjct: 169 TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 228

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + +G  PN  TYN+L+  +C    VD A +LL  + + GC P  V+Y T++  +C   + 
Sbjct: 229 RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 288

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +A EL             + +N +I  LC++  +++A  LL +M   G   N++TY+ I
Sbjct: 289 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAI 348

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+ LC+  NV+ ++G+L +M   GC P+I ++ +LLKG     +  +A +L + M + G 
Sbjct: 349 INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGC 408

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+ V ++TLI  LC  G M +A+ V  QM +  C PN  TYS +I G AKA  L  A +
Sbjct: 409 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 468

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++N M   G +P+ + Y  + + L  ++   +A   + K+      P+TV +N  + GLC
Sbjct: 469 LFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLC 527

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
             G+ ++A+ ++  M    C+P+  TY  L++GL     + EA EL+ ++
Sbjct: 528 RNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 160/315 (50%), Gaps = 11/315 (3%)

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP--NVTTYSALIDGFAKAGNLLGAS 325
           P+    + L+  LC  G  D+A  V       +C P   V  Y AL DG+ +AG L  A 
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVV-----GACGPAATVVAYGALTDGYCRAGRLGDAR 155

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   M      PN   Y  ++  LC+      A S+++ M    C P+ VT+N  ++  
Sbjct: 156 RVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEAT 212

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C       AM+L+D M+   C PN  TYN L+DG+     V +A EL+  +   G + + 
Sbjct: 213 CKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPST 272

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V YNT+L G+C A    +A +L+ +ML E    +  TFN++IY+ C++G +  AIQLL++
Sbjct: 273 VNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 332

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           +   G    +I++Y +++ G+C    +  A   L KM + G  P+  T+N L++ L S  
Sbjct: 333 MSKHG-CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAA 391

Query: 566 GHLGPVYILDDIMAN 580
             +    ++D++  N
Sbjct: 392 QWVDAEELMDNMTQN 406



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 187/372 (50%), Gaps = 11/372 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  M+ EG + +   +  +++     G  + AL++   +   G KP+   YN +L  L 
Sbjct: 224 LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 283

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R+   + + + M R+   PN  T+N+++ +LC+   +  A +LL +M   GC  + V
Sbjct: 284 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 343

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  I++ +C+   V+ A  L  +  S      +  YN L+ GLC   +  +A  L+  M
Sbjct: 344 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNM 403

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P+ +T++T+I  LC  G +  ++ +  QM  +GC PN  ++++++ G     + 
Sbjct: 404 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 463

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L+N M  +GF P+ + Y  L   L  + +++EA+    +++++   P+   Y+A+
Sbjct: 464 DQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 522

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  + G    A  I   M+S+GC P+ + Y  +++ L      ++A  L+ K+   + 
Sbjct: 523 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD- 581

Query: 372 PPNTVTFNTFIK 383
               V  N+ IK
Sbjct: 582 ----VLVNSLIK 589


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/563 (26%), Positives = 280/563 (49%), Gaps = 7/563 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L    +++ + Y+   M+   +      ++++  S    G  +QA     ++REFG
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                  YN ++  LL     +    +Y  M  +G  P++ TY+ L+  L K   +D   
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVM 243

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL EM   G  P+  ++T  +  + + G++ EA E+  R      G  V  Y  LI+ L
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   K++ A  +  +M      P+ +TY T++    D  ++++      +M   G  P++
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT L+      G   EA D  + M  +G LPN+  Y+TLI GL     +D+A+ +   
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME     P   TY   ID + K+G+ + A + + +M + G +PN+VA    +  L +   
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  +   +      P++VT+N  +K     G +D A+KLL +M +  C P++   N 
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++ L + +RV EA+++   +++  ++  +VTYNT+L G+ + G + EA +L   M+ +G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + ITFN +    CK  +V  A+++L ++   G   PD+ +Y ++++G+  +G ++EA
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTYNTIIFGLVKNGQVKEA 662

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
             +  +M  + + P+F T   L+
Sbjct: 663 MCFFHQM-KKLVYPDFVTLCTLL 684



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 155/592 (26%), Positives = 262/592 (44%), Gaps = 80/592 (13%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            EID    LL +M   G      V  S+IN+  +    ++A KMF R++E  LKPTV  YN
Sbjct: 518  EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L  L    +      ++  M + G  PN  T+N L   LCKN+ V  A K+L +M + 
Sbjct: 578  TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637

Query: 130  GCA----------------------------------PDAVSYTTIVSSICKLGQVEEAR 155
            GC                                   PD V+  T++  + K   +E+A 
Sbjct: 638  GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAY 697

Query: 156  ELAMRF-----------------GS-------------------------GVSVYNALIN 173
            ++   F                 GS                         G S+   +I 
Sbjct: 698  KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757

Query: 174  GLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
              CK + +  A  L  +   D G+ P + TY+ +I  L +   +E +  +  Q+   GC 
Sbjct: 758  YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817

Query: 233  PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            P++ ++  LL  Y   G+  E  +L+  M       N + ++ +I GL   G++D+A+ +
Sbjct: 818  PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877

Query: 293  SYQ-MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
             Y  M +    P   TY  LIDG +K+G L  A Q++  M+  GC PN   Y  ++    
Sbjct: 878  YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937

Query: 352  QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
            +      A +L ++M  E   P+  T++  +  LC  GRVD  +    ++K+    P++ 
Sbjct: 938  KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997

Query: 412  TYNELLDGLLRVNRVKEAFELVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             YN +++GL + +R++EA  L  E++   GI  ++ TYN+++  +  AGMV EA ++  +
Sbjct: 998  CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057

Query: 471  MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            +   G + +  TFN +I  Y   GK  +A  +   +  GG ++P+  +Y  L
Sbjct: 1058 IQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG-FSPNTGTYEQL 1108



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 141/503 (28%), Positives = 239/503 (47%), Gaps = 41/503 (8%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
           T N +L+AL  + +++    +   M  +    D  +Y TI  S+   G +++A   A+R 
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA-PYALRK 178

Query: 161 ---FGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              FG  ++ Y  N LI+ L K     EA  +   M+  G  P++ TYS+++  L    +
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +++ +G+L +M   G  PN+++FT  ++     G+ +EA ++  RM  EG  P+VV Y+ 
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI  LC+   +D A  V  +M+     P+  TY  L+D F+   +L    Q W+ M  +G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+VV +T +V  LC+   F +A   ++ M  +   PN  T+NT I GL    R+D A+
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +L   M+     P   TY   +D   +      A E   +++  GI  NIV  N  L+ +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----- 510
            +AG   EA Q+   +   G   D++T+N+++  Y K G+++ AI+LL  +   G     
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538

Query: 511 -----------------------------EWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
                                        +  P +++Y +LL G+  +G +QEA    + 
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           M+ +G  PN  T+N L   L  N
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKN 621



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 138/285 (48%), Gaps = 11/285 (3%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI---R 57
            +++  G+  +ID +  L ++M       +      VI+   + G  + AL ++Y +   R
Sbjct: 826  LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885

Query: 58   EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            +F   PT   Y  ++D L    R      ++  M   G  PN   YNIL+    K    D
Sbjct: 886  DFS--PTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD 943

Query: 118  GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALI 172
             A  L   M  +G  PD  +Y+ +V  +C +G+V+E     +EL        V  YN +I
Sbjct: 944  AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII 1003

Query: 173  NGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
            NGL K H++EEA  L  EM   RGI P++ TY+++I +L   G VE +  I  ++   G 
Sbjct: 1004 NGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063

Query: 232  NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             PN+ +F +L++GY L G+   A  ++  M+  GF PN   Y  L
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 96/188 (51%), Gaps = 1/188 (0%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
            T T N  ++ L   G+++    + D M++     +  TY  +   L     +K+A   +
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            ++ + G  LN  +YN ++H + ++    EA ++  +M++EG +    T++ ++    K+
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             +++ + LL  +   G   P++ ++T  +  +  +G + EA+  L++M +EG  P+  T
Sbjct: 237 RDIDSVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295

Query: 554 WNVLVRSL 561
           + VL+ +L
Sbjct: 296 YTVLIDAL 303


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 257/493 (52%), Gaps = 14/493 (2%)

Query: 49  ALKMFYRIR-EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG--MEPNVFTYNI 105
           A K F  +R + G  P+V+    +++ L    RF+    + + +++    ++P +F    
Sbjct: 2   AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIE-- 59

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SG 164
           L +       ++ + + L  M    CA  A +Y +++ +  K G  ++A  +    G SG
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 165 VS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           +      +N L+N   K  +++  + L  EM ++   PNVITYS +I ++C  G VE +L
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +   M  RGC PNI ++TS++ G    G   +A  L+  M  EG +   V Y++LIHGL
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
             +G  D A  +  +M      P+  T+++L+ G   AG    A +I+      GC+ +V
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  ++  LC++    +A  +  ++  +   P+  TFN  + GLC  GR+  A  LL  
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           MK+  C P++T YN L+DGL +  RV+EA +L+ E++  G + ++VTYNT++   C+ G 
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG---GGEWNPDII 517
           + +A +L  ++  +G   + +T+N I+   C  G+V+ A +L + ++     G  +PD +
Sbjct: 420 IEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFV 478

Query: 518 SYTSLLWGICNSG 530
           +YT+LL G   +G
Sbjct: 479 TYTTLLNGARQAG 491



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/438 (29%), Positives = 233/438 (53%), Gaps = 10/438 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           +FI +   Y   GL E++++   R+       T   YN ++DA +          +Y  M
Sbjct: 56  IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            + G+ P+ +T+N+L+ A  K  RVD  +KL  EM N+ C+P+ ++Y+ ++ ++CK G V
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E+A ++ +   S      +  Y ++I+GL K   +++AF+L  EM   G+    + Y+++
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  L   G  + +  +  +M  +G  P+  +FTSL+ G  + GR  EA  ++      G 
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGC 295

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             +V  Y+ LI  LC +  +DEA  +  ++EE+   P+V T++AL+DG  K+G +  A  
Sbjct: 296 ALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFI 355

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M   GC+P+V  Y  ++  L ++    +A  L+ +M      P+ VT+NT I   C
Sbjct: 356 LLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESC 415

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG----IQ 442
             GR++ A++L +++   +   N  TYN +L+GL    RV EA++L   +++      I 
Sbjct: 416 KGGRIEDALRLFEEISA-KGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVID 474

Query: 443 LNIVTYNTILHGVCRAGM 460
            + VTY T+L+G  +AG+
Sbjct: 475 PDFVTYTTLLNGARQAGL 492



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 208/398 (52%), Gaps = 6/398 (1%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
            S YN+LI+   K    ++A  +   M   G+ P+  T++ ++++      V++   +  
Sbjct: 89  ASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFE 148

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  + C+PN+ +++ L+      G   +A  ++  M   G  PN+  Y+++I GL  +G
Sbjct: 149 EMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSG 208

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D+A  +  +M           Y++LI G  ++G    A++++  M+S G  P+ V +T
Sbjct: 209 HVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFT 268

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            +V  L       +A  + ++     C  +   +N  I  LC   R+D A ++  ++++ 
Sbjct: 269 SLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEED 328

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             +P++ T+N L+DGL +  R+ +AF L+ ++++ G   ++  YNT++ G+ ++G V EA
Sbjct: 329 GLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA 388

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            QLL +M   G + D +T+N +I   CK G++ +A++L + I   G  N   ++Y ++L 
Sbjct: 389 GQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFAN--TVTYNTILN 446

Query: 525 GICNSGGMQEAFIYLQKMLNEG----ICPNFATWNVLV 558
           G+C +G + EA+     M  E     I P+F T+  L+
Sbjct: 447 GLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLL 484



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 185/360 (51%), Gaps = 2/360 (0%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            Y+++I +    G  + +L +   M   G  P+ ++F  L+  +    R      L+  M
Sbjct: 91  AYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM 150

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +   PNV+ YS LI  +C  G +++A+ V   M+   C PN+ TY+++IDG  K+G++
Sbjct: 151 QNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHV 210

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  ++  M S G     V Y  ++  L ++     A  L  +M  +   P+ VTF + 
Sbjct: 211 DKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSL 270

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           + GL   GR   A ++  + +   C  ++  YN L+D L +  R+ EA+E+  E+E+ G+
Sbjct: 271 VYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++ T+N ++ G+C++G + +AF LLG M   G   D   +N +I    K G+V  A Q
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL  ++  G + PD+++Y +L+   C  G +++A    +++  +G   N  T+N ++  L
Sbjct: 391 LLLEMQSLG-YEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGL 448



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 174/346 (50%), Gaps = 1/346 (0%)

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +E S+  L +M    C     ++ SL+  ++  G T +A  ++  M + G  P+   
Sbjct: 67  AGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYT 126

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           ++ L++       +D    +  +M+  +C PNV TYS LID   K G +  A +++  M 
Sbjct: 127 FNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK 186

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           S GC PN+  YT M+  L ++    +A  L E+M  E      V +N+ I GL   GR D
Sbjct: 187 SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRAD 246

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A KL  +M      P+  T+  L+ GL    R  EA  +  E    G  L++  YN ++
Sbjct: 247 AAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLI 306

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C++  + EA+++ G++  +G   D  TFN ++   CK G++++A  LL  ++  G  
Sbjct: 307 DTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG-C 365

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            PD+  Y +L+ G+  SG ++EA   L +M + G  P+  T+N L+
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 172/367 (46%), Gaps = 34/367 (9%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG  P++ + T+L++   +  R +EA ++   + +  ++     +  L  G  S G +++
Sbjct: 13  RGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEK 72

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           +V    +ME + C    + Y++LID F KAG    A  ++  M  +G  P+   +  ++ 
Sbjct: 73  SVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMN 132

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
              +         L E+M  +NC PN +T++  I  +C CG V+ A+K+   MK   C P
Sbjct: 133 AFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRP 192

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           NI TY  ++DGL +   V +AF L  E+   G+    V YN+++HG+ R+G    A +L 
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLF 252

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG------------------ 510
            +ML +G + D +TF  ++Y     G+ + A ++    R  G                  
Sbjct: 253 REMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKS 312

Query: 511 -----EWN-----------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
                 W            PD+ ++ +L+ G+C SG + +AFI L  M   G  P+   +
Sbjct: 313 KRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVY 372

Query: 555 NVLVRSL 561
           N L+  L
Sbjct: 373 NTLIDGL 379



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 136/266 (51%), Gaps = 10/266 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG     D    L ++M  +G+      F S++      G A +A ++F   R+ G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V +YN ++D L    R      I+  ++ DG+ P+V+T+N L+  LCK+ R+  A+
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            LL +M   GC PD   Y T++  + K G+VEEA +L +   S      V  YN LI+  
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDES 414

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI---LGQMFVRGC- 231
           CK  +IE+A  L  E+  +G   N +TY+TI++ LC  G V+ +  +   + Q  V G  
Sbjct: 415 CKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVI 473

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDL 257
           +P+  ++T+LL G    G +  A+ L
Sbjct: 474 DPDFVTYTTLLNGARQAGLSELANSL 499


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 267/529 (50%), Gaps = 13/529 (2%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRF----SMINPIYSNMKRDGMEPNVFT 102
           ++AL +F  +      P+VK +  +L  ++    +    S++  I+S++   G+E +  T
Sbjct: 58  DEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSL---GIEADTIT 114

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---- 158
            NI++  LC+   V   + +L  M   G  P  ++ T +++ +C  G V +A  L     
Sbjct: 115 LNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHME 174

Query: 159 -MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            MR+   V  Y  LINGLCK      A   L +M +R   PNV+ YSTI+  LC  G V 
Sbjct: 175 KMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVS 234

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  +M  +G  PN+ ++  L++G    GR  E   L + MI+ G   ++   + L+
Sbjct: 235 EALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILV 294

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C  G + +A SV   M      P+V TY++LI  +     +  A ++++ M+S GC 
Sbjct: 295 DAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCL 354

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P++V +T ++   C++   ++   L+E+MA     P+ VT+ T I G C  GR   A +L
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKEL 414

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
              M +Y  +PN+ T   +LDGL + N + EA  L   +EK  + LNIV Y+ +L G+C 
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCS 474

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           AG +  A++L   +  +G +++  T+ I+I   CKQG ++ A  LL  +   G   PD  
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCL-PDNC 533

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           +Y   + G+     +  +  YL  M ++G   + AT  + +  L +N G
Sbjct: 534 TYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNEG 582



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 241/482 (50%), Gaps = 8/482 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I  V+++   + +E  + +  +   VIN   R+ L      +   + + GL+PTV     
Sbjct: 96  ISLVKHIFSSLGIEADTITLNI---VINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTA 152

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++ L  +   +    +  +M++     +V+TY +L+  LCK      A + L +M  + 
Sbjct: 153 LINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERN 212

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAF 185
             P+ V Y+TI+  +CK G V EA  L     G GV      Y  LI GLC   + +E  
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETG 272

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM+  G+  ++ T + ++ + C  G V  +  ++G M + G  P++ ++ SL+  Y
Sbjct: 273 SLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIY 332

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L  + +EA  +++ M+  G LP++V +++LIHG C + ++++ + +  +M +    P+V
Sbjct: 333 CLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDV 392

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LI GF +AG  L A +++  M   G  PN+     ++  LC+ N+  +A SL E 
Sbjct: 393 VTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEA 452

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M   N   N V ++  + G+C  G+++ A +L   +       N+ TY  ++ GL +   
Sbjct: 453 MEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGS 512

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + +A +L+  +E+ G   +  TYN  + G+     +  + + L  M  +G  +DA T  I
Sbjct: 513 LDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEI 572

Query: 486 II 487
            I
Sbjct: 573 TI 574



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 96/205 (46%), Gaps = 5/205 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+ V +LL++M   G       + ++I  + + G    A ++F  + ++G  P ++    
Sbjct: 373 INKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAV 432

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ILD L   N  S    +   M++  ++ N+  Y+ILL  +C   +++ A++L   +  KG
Sbjct: 433 ILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
              +  +YT ++  +CK G +++A +L +       +     YN  + GL  + +I  + 
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSI 552

Query: 186 WLLCEMVDRGIDPNVITYSTIISSL 210
             L  M D+G   +  T    I+ L
Sbjct: 553 KYLTIMRDKGFSVDAATTEITINYL 577


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 168/595 (28%), Positives = 282/595 (47%), Gaps = 55/595 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L E    D     L+++K  GVS     F  +I++Y ++G+AE+A++ F R++EF 
Sbjct: 98  VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157

Query: 61  LKPTVKIYNHILDALLAENRFSMI------------------------------------ 84
            +P V  YN IL  ++ E  F M+                                    
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             ++ +M   G+ PN  TY IL+  LC+    D A KL  EM   G  PD+V++  ++  
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277

Query: 145 ICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            CKLG++ EA EL   F       G+  Y++LI+GL +  +  +AF L   M+ + I P+
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +I Y+ +I  L   G +E +L +L  M  +G +P+ + + +++K     G   E   L  
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M      P+   ++ LI  +C NG + EA  +  ++E++ C P+V T++ALIDG  K+G
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG 457

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTC----MVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            L  A  + ++M     +   +  +         + ++    +A+  +   A     P+ 
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V++N  I G C  G +D A+KLL+ ++     P+  TYN L++GL RV R +EAF+L   
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF-- 575

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
             K   + +   Y +++   CR   V+ AF L  K L + + LD  T N I   + K+G+
Sbjct: 576 YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGE 634

Query: 496 VNNAIQL---LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              A++    LD  +      P    YT  L G+C SG   EA +    +  + I
Sbjct: 635 TERALRRLIELDTRKDELTLGP----YTIWLIGLCQSGRFHEALMVFSVLREKKI 685



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 247/536 (46%), Gaps = 62/536 (11%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           + +++  L ++N  D  ++ L E+ + G + D+  +  ++S+  K+G  E+A E   R  
Sbjct: 95  FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154

Query: 163 S-----GVSVYNALINGLCKEHKIEEAFWLLC-----EMVDRGIDPNVITYSTIISSLCD 212
                  V  YN ++  + +E    E F++L      EM+     PN+ T+  ++  L  
Sbjct: 155 EFDCRPDVFTYNVILRVMMRE----EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G    +  +   M  RG +PN  ++T L+ G    G   +A  L+  M   G  P+ VA
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           ++ L+ G C  G M EA  +    E++     +  YS+LIDG  +A     A +++  M+
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                P+++ YT +++ L +      A  L+  M  +   P+T  +N  IK LCG G ++
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
               L  +M + E  P+  T+  L+  + R   V+EA E+ TEIEK G   ++ T+N ++
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450

Query: 453 HGVCRAGMVVEAFQLLGKMLI--------------------------------------- 473
            G+C++G + EA  LL KM +                                       
Sbjct: 451 DGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G+  D +++N++I  +C+ G ++ A++LL+ ++  G  +PD ++Y +L+ G+   G  +
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG-LSPDSVTYNTLINGLHRVGREE 569

Query: 534 EAF--IYLQKMLNE--GICPNFATWNVLVRSLFSN----LGHLGPVYILDDIMANK 581
           EAF   Y +        +  +  TW+   R +       + +L  +  LDD  AN+
Sbjct: 570 EAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE 625



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 236/514 (45%), Gaps = 16/514 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K      Q +   M   G+S +   +  +I+   + G A+ A K+FY ++  G
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N +LD      R      +    ++DG    +  Y+ L+  L +  R   A+
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           +L   M  K   PD + YT ++  + K G++E+A +L     S G+S     YNA+I  L
Sbjct: 324 ELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    +EE   L  EM +    P+  T++ +I S+C  G V  +  I  ++   GC+P++
Sbjct: 384 CGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSV 443

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI--REGFLPNVVAYS--TLIHGLCSNGSMDEAVS 291
            +F +L+ G    G   EA  L ++M   R   L   +++S       +  +GS+ +A  
Sbjct: 444 ATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYR 503

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
                 +    P++ +Y+ LI+GF +AG++ GA ++ N +   G SP+ V Y  ++  L 
Sbjct: 504 DLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLH 563

Query: 352 QNNMFHQAHSLI-EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL-LDQMKQYECLPN 409
           +     +A  L   K  F + P     + + +   C   +V  A  L +  +K+  CL +
Sbjct: 564 RVGREEEAFKLFYAKDDFRHSP---AVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDD 620

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             T NE ++   +    + A   + E++    +L +  Y   L G+C++G   EA  +  
Sbjct: 621 -ETANE-IEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFS 678

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +  +   +   +   +I+  CK+ +++ AI++ 
Sbjct: 679 VLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 234/460 (50%), Gaps = 5/460 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE----LAMRF 161
           LL   CK  + + +   L  + NKG  PD +  T ++        +E+A      L    
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YNA+I+G CK ++IE A  +L  M  RG  P+++TY+ +I SLC+   +  +L 
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L Q+ +  C P + ++T L++  ++ G  +EA  L   M+  G LP++  Y+ +I G+C
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G ++ A  +   +    C P+V +Y+ L+  F   G      ++   M S GC PN V
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++  LC+     +A S+++ M  +   P+T +++  I  LC  GR+D A+ ++D M
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               CLP+I  YN +L  L +     +A E+  ++   G   N+ +YNT++  +   G  
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  ++  M+ +G   D IT+N +I   C+ G V  AI LLD +   G + P +ISY  
Sbjct: 444 SRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG-FRPTVISYNI 502

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L G+C    + +A     +M+ +G  PN  T+ +L+  +
Sbjct: 503 VLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/431 (32%), Positives = 222/431 (51%), Gaps = 10/431 (2%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC---KLGQVEE 153
           EP+VF YN ++   CK N+++ A ++L  M  +G  PD V+Y  ++ S+C   KLG    
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203

Query: 154 ARE--LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             +  L       V  Y  LI     E  I EA  LL EM+ RG+ P++ TY+ II  +C
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G VE +  ++  +  +GC P++ S+  LL+ +L  G+  E   L   M   G  PN V
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            YS LI  LC  G +DEA+SV   M E    P+  +Y  LI    K G L  A  I + M
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           ISNGC P++V Y  ++  LC+N   +QA  +  K+    CPPN  ++NT I  L  CG  
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 443

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A+ ++  M      P+  TYN L+  L R   V+EA  L+ ++E+ G +  +++YN +
Sbjct: 444 SRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 503

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L G+C+   + +A  +  +M+ +G + +  T+ ++I      G    A++L + +     
Sbjct: 504 LLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL----- 558

Query: 512 WNPDIISYTSL 522
           ++ D+IS  S 
Sbjct: 559 FSRDVISQDSF 569



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 213/422 (50%), Gaps = 5/422 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           I E   +P V  YN ++      N+      + + MK  G  P++ TYNI++ +LC   +
Sbjct: 138 ILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRK 197

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNA 170
           +  A  +L ++    C P  ++YT ++ +    G + EA +     LA      +  YNA
Sbjct: 198 LGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNA 257

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +I G+CKE  +E A  L+  +  +G +P+VI+Y+ ++ +  + G  +    ++ +MF RG
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN  +++ L+      GR  EA  +   MI +   P+  +Y  LI  LC  G +D A+
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +   M  N C P++  Y+ ++    K GN   A +I+N++   GC PNV +Y  M+  L
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
                  +A  ++  M  +   P+ +T+N+ I  LC  G V+ A+ LLD M+Q    P +
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 497

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            +YN +L GL +V R+ +A  +  E+ + G + N  TY  ++ G+  AG   EA +L   
Sbjct: 498 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANS 557

Query: 471 ML 472
           + 
Sbjct: 558 LF 559



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 207/407 (50%), Gaps = 5/407 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +VI+ + +V   E A ++  R++  G  P +  YN ++ +L    +  +   +   +  D
Sbjct: 152 AVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLD 211

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
              P V TY IL++A      ++ A KLL EM  +G  PD  +Y  I+  +CK G VE A
Sbjct: 212 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERA 271

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            EL     S      V  YN L+     + K +E   L+ EM  RG +PN +TYS +ISS
Sbjct: 272 AELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 331

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G ++ ++ +L  M  +   P+ +S+  L+      GR   A  + + MI  G LP+
Sbjct: 332 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 391

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC NG+ ++A+ +  ++    CPPNV++Y+ +I      G+   A  +  
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 451

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            MIS G  P+ + Y  ++  LC++ +  +A  L++ M      P  +++N  + GLC   
Sbjct: 452 AMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 511

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           R+D A+ +  +M +  C PN TTY  L++G+       EA EL   +
Sbjct: 512 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 180/353 (50%), Gaps = 2/353 (0%)

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G    SL  L  +  +G  P++   T L+KG+       +AS +   ++     P+V
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 147

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
            AY+ +I G C    ++ A  V  +M+     P++ TY+ +I        L  A  + ++
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           ++ + C P V+ YT +++        ++A  L+E+M      P+  T+N  I+G+C  G 
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V+ A +L+  +    C P++ +YN LL   L   +  E  +LV E+   G + N VTY+ 
Sbjct: 268 VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 327

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++  +CR G + EA  +L  M+ +    D  +++ +I A CK+G+++ AI ++D +   G
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              PDI++Y ++L  +C +G   +A     K+   G  PN +++N ++ +L+S
Sbjct: 388 CL-PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 172/317 (54%), Gaps = 2/317 (0%)

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G+ +E+      ++ +G+ P+V+  + LI G  +  ++++A  V  ++ E+   P+V  
Sbjct: 91  AGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRV-MEILESHTEPDVFA 149

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+A+I GF K   +  A+Q+ NRM + G  P++V Y  M+  LC       A ++++++ 
Sbjct: 150 YNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL 209

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +NC P  +T+   I+     G ++ AMKLL++M     LP++ TYN ++ G+ +   V+
Sbjct: 210 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 269

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A EL+T +   G + ++++YN +L      G   E  +L+ +M   G + + +T++I+I
Sbjct: 270 RAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 329

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            + C+ G+++ AI +L ++    E  PD  SY  L+  +C  G +  A   +  M++ G 
Sbjct: 330 SSLCRFGRIDEAISVL-KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388

Query: 548 CPNFATWNVLVRSLFSN 564
            P+   +N ++ +L  N
Sbjct: 389 LPDIVNYNTILAALCKN 405



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 169/328 (51%), Gaps = 5/328 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+    LL++M   G+      + ++I    + G+ E+A ++   +   G +P V  YN 
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L A L + ++     + + M   G EPN  TY+IL+ +LC+  R+D A  +L  M  K 
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAF 185
             PD  SY  ++S++CK G+++ A  +     S      +  YN ++  LCK     +A 
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +  ++   G  PNV +Y+T+IS+L   G+   +LG++  M  +G +P+  ++ SL+   
Sbjct: 413 EIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCL 472

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   EA  L + M + GF P V++Y+ ++ GLC    +D+A+ +  +M E  C PN 
Sbjct: 473 CRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNE 532

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMIS 333
           TTY  LI+G   AG    A ++ N + S
Sbjct: 533 TTYILLIEGIGFAGWRTEAMELANSLFS 560



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 62/118 (52%), Gaps = 1/118 (0%)

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
           +E    + ++L   T+ D   +N +I  +CK  ++  A Q+L+R++  G + PDI++Y  
Sbjct: 129 IEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARG-FLPDIVTYNI 187

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           ++  +CN   +  A   L ++L +   P   T+ +L+ +     G    + +L++++A
Sbjct: 188 MIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLA 245


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 173/616 (28%), Positives = 284/616 (46%), Gaps = 91/616 (14%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL----LAENR 80
           GV+  E  + +++  + R+   E AL++ + +   G  P+    + ++D L    L E  
Sbjct: 286 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 345

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           FS+       +   GM PNVF YN L+  LCKN R D A +L  EM  +G  P+ V+Y  
Sbjct: 346 FSLA----CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 401

Query: 141 IVSSICKLGQVEEAREL--AMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDR 194
           ++ ++CK G +E+A  L   MR   G+ V    YN+LING CK+  ++ A  LL  MV  
Sbjct: 402 LIHALCKRGMIEDALCLFDKMR-DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 460

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P   +YS +I+ LC  G++ + + +  +M  RG   N ++FT+L+ G+    +  EA
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID- 313
           + L+++MI    +PN V ++ +I G C  G++ +A  +  QM E    P+  TY +LI  
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580

Query: 314 ----------------------------------GFAKAGNLLGASQIWNRMI------- 332
                                             GF + G       +W+ M        
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 640

Query: 333 ----------------------------SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
                                         G  P+ + YTCM+  L +     QA +  +
Sbjct: 641 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 700

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   PNTVT    I  LC  G +  A  L  +M     LPN  TYN  LD      
Sbjct: 701 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 760

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +++A +L + + + G   +IV++N ++ G+C+AG + EA  L+ K+   G   D I+++
Sbjct: 761 DMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYS 819

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL-WGICN-SGGMQEAFIYLQKM 542
            II+  CK G +N A +L + +   G   PD+++Y   + W  CN  G   +A      M
Sbjct: 820 TIIHELCKMGDINKAFELWNEMLYKG-LKPDVVAYNIFIRW--CNVHGESDKALGIYTNM 876

Query: 543 LNEGICPNFATWNVLV 558
           +  G+ PN+ T+  L+
Sbjct: 877 IRSGVQPNWDTYRALL 892



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 277/532 (52%), Gaps = 9/532 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+KL +    D    L ++M   G+  +E  +  +I++  + G+ E AL +F ++R+ G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K TV  YN +++    +        + S M ++G+ P   +Y+ L+  LC+N  +    
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGL 175
           +L  EM  +G A +  ++T +++  CK  +++EA  L  +   S V      +N +I G 
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I +AF L  +MV+ G+ P+  TY ++IS LC    V  +   +  +       N 
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S T+LL G+   GR  E   LW+ M   G   ++V+++ +++        +++  +  +
Sbjct: 607 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 666

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E    P+   Y+ +ID  +K  N++ A   W++M+ +G SPN V +T ++  LC++  
Sbjct: 667 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 726

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M   N  PN  T+N F+      G ++ A  L   M Q   L +I ++N 
Sbjct: 727 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNI 785

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +  +++EA +L+++I + G   + ++Y+TI+H +C+ G + +AF+L  +ML +G
Sbjct: 786 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 845

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGI 526
            K D + +NI I      G+ + A+ +  + IR G + N D  +Y +LL GI
Sbjct: 846 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD--TYRALLSGI 895



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 268/570 (47%), Gaps = 27/570 (4%)

Query: 23  VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV-------------KIYN 69
           V G+S S G+    +N Y     A Q L    +IR+F L   +              +Y 
Sbjct: 173 VLGLSLSSGI---TVNQYT----ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYT 225

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             + A            +   M+ +G++ +   YN+L+  LCKN RV  A ++   M N 
Sbjct: 226 AGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNI 285

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSVYNA--LINGLCKEHKIEEA 184
           G   D V+Y T+V   C++ ++E A  +    +R G   S  N   +I+ L K+  +EEA
Sbjct: 286 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 345

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L C++ D G+ PNV  Y+ +I  LC     + +  +  +M  RG  PN  ++  L+  
Sbjct: 346 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 405

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   +A  L+++M  +G    V  Y++LI+G C  GS+D A  +   M +    P 
Sbjct: 406 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 465

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +YS LI G  + G+L    ++   M   G + N   +T ++   C++    +A  L +
Sbjct: 466 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 525

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM   N  PN VTFN  I+G C  G +  A +L DQM +    P+  TY  L+ GL   +
Sbjct: 526 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V +A E V ++E     LN  +   +L+G  R G   E + L  +M + G KLD ++F 
Sbjct: 586 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 645

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           II+YA  KQ     +  L   ++  G   PD I YT ++  +     M +A     +M+ 
Sbjct: 646 IIVYAALKQHDKEKSCVLFREMKEQG-VKPDDIFYTCMIDALSKEENMIQALNCWDQMVV 704

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +G  PN  T  VL+ +L  + G+LG   +L
Sbjct: 705 DGYSPNTVTHTVLINNLCKS-GYLGSAELL 733



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 265/544 (48%), Gaps = 6/544 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   GV   E V+ + I +Y      + A  +  R+   G+K +   YN ++  L 
Sbjct: 208 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 267

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      + + M   G+  +  TY  L+   C+   ++ A ++  +M   G  P   
Sbjct: 268 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 327

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + + ++  + K   VEEA  LA + G       V  YNALI+ LCK  + ++A  L  EM
Sbjct: 328 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 387

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG++PN +TY+ +I +LC  G +E +L +  +M  +G    ++ + SL+ GY   G  
Sbjct: 388 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 447

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L + M++EG  P   +YS LI GLC NG +   + +  +M E     N  T++AL
Sbjct: 448 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 507

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+GF K   +  A++++++MI +   PN V +  M++  C      +A  L ++M     
Sbjct: 508 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 567

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+ + I GLC    V  A + +  ++    + N  +   LL G  R  R  E + 
Sbjct: 568 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 627

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+   G++L++V++  I++   +     ++  L  +M  +G K D I +  +I A  
Sbjct: 628 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 687

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+  +  A+   D++   G ++P+ +++T L+  +C SG +  A +  ++ML   + PN 
Sbjct: 688 KEENMIQALNCWDQMVVDG-YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 746

Query: 552 ATWN 555
            T+N
Sbjct: 747 FTYN 750



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 4/385 (1%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI  N  T S I+ SL  +     +  +  +M   G + + + +T+ ++ Y        A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L  RM  EG   + V Y+ L++GLC N  + EAV V   M       +  TY  L+ G
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           F +   L  A +I + MI  G  P+    + M+  L +  +  +A SL  K+      PN
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 360

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
              +N  I  LC   R D A +L  +M      PN  TY  L+  L +   +++A  L  
Sbjct: 361 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 420

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++   GI++ +  YN++++G C+ G +  A  LL  M+ EG    A +++ +I   C+ G
Sbjct: 421 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480

Query: 495 KVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            +++ ++L   +   G  WN    ++T+L+ G C    M EA     KM++  + PN  T
Sbjct: 481 DLSSCMELHREMAERGIAWNN--YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 538

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIM 578
           +NV++   +  +G++   + L D M
Sbjct: 539 FNVMIEG-YCLVGNIRKAFQLYDQM 562



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/508 (21%), Positives = 216/508 (42%), Gaps = 74/508 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  I+    L  +M+ +G+  +   + S+IN Y + G  ++A  +   + + G
Sbjct: 402 LIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEG 461

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD--- 117
           L PT   Y+ ++  L      S    ++  M   G+  N +T+  L+   CK+ ++D   
Sbjct: 462 LTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAA 521

Query: 118 --------------------------------GAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                            A++L  +M   G  PD  +Y +++S +
Sbjct: 522 RLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGL 581

Query: 146 CKLGQVEEARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C    V +A E      +  +V N     AL+ G  +E +  E + L  EM  RG+  ++
Sbjct: 582 CLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDL 641

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++++ I+ +     + E S  +  +M  +G  P+   +T ++          +A + W++
Sbjct: 642 VSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQ 701

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA---- 316
           M+ +G+ PN V ++ LI+ LC +G +  A  +  +M   +  PN  TY+  +D FA    
Sbjct: 702 MVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGD 761

Query: 317 ------------------------------KAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
                                         KAG +  A  + +++  +G SP+ ++Y+ +
Sbjct: 762 MEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTI 821

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+    ++A  L  +M ++   P+ V +N FI+     G  D A+ +   M +   
Sbjct: 822 IHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGV 881

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVT 434
            PN  TY  LL G+  +    +A  L T
Sbjct: 882 QPNWDTYRALLSGISLMVSKGQALLLTT 909


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 279/561 (49%), Gaps = 11/561 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHIL 72
           ++ +L+ M+VE +S +      VI +Y   GL E+AL+++Y + + +   P V   N +L
Sbjct: 113 MEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLL 172

Query: 73  DALLAENRFSMINPIYSNM-KRDGMEPNV---FTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + L+   R  +   +Y  M + DG        ++  I++K LCK  +++   KL+ +   
Sbjct: 173 NMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWG 232

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEE 183
           +GC P+ + Y T++   CK G +E A     EL ++ F   V  Y A+ING CK+   + 
Sbjct: 233 QGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKA 292

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              LL EM  RG+  NV  Y+TII +    G++  ++  +  M   GC P+I ++ +L+ 
Sbjct: 293 IDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLIS 352

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G    G+  EA  L  + + +G +PN  +Y+ LIH  C  G  D A +   +M E    P
Sbjct: 353 GSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKP 412

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ TY AL+ G   AG +  A  I  +M+  G  P+   Y  ++  LC+      A  L+
Sbjct: 413 DLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLL 472

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M  ++  P+   + T + G    G +D A KL +   +    P I  YN ++ G  + 
Sbjct: 473 AEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKF 532

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +K+A   +  ++K  +  +  TY+T++ G  +   +  A ++  +M+    K + +T+
Sbjct: 533 GMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTY 592

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
             +I  +C++G ++ ++++   ++  G   P++++Y+ L+   C    + +A  + ++ML
Sbjct: 593 TSLINGFCRKGDLHRSLKIFREMQACG-LVPNVVTYSILIGSFCKEAKLIDAASFFEEML 651

Query: 544 NEGICPNFATWNVLVRSLFSN 564
                PN  T+N LV     N
Sbjct: 652 MNKCVPNDVTFNYLVNGFSKN 672



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 241/515 (46%), Gaps = 19/515 (3%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K +   +  LL +M   G++ +  V+ ++I++  + G   +A++    + E G KP + 
Sbjct: 286 KKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIV 345

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN ++     + + S  + +       G+ PN F+Y  L+ A CK    D A   L+EM
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 405

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKI 181
             +G  PD V+Y  +V  +   G+V+ A   RE  +  G      +YN L++GLCK+ K+
Sbjct: 406 TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL 465

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
             A  LL EM+D+ + P+   Y+T++      GN++ +  +      +G NP I  + ++
Sbjct: 466 PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAM 525

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +KGY   G   +A    NRM +    P+   YST+I G      +D A  +  +M +  C
Sbjct: 526 IKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKC 585

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PNV TY++LI+GF + G+L  + +I+  M + G  PNVV Y+ ++   C+      A S
Sbjct: 586 KPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAAS 645

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCG--------------RVDWAMKLLDQMKQYECL 407
             E+M    C PN VTFN  + G    G              +    +    +M      
Sbjct: 646 FFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWA 705

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P    YN +L  L +    + A +L  ++   G   + V++  +LHGVC  G   E   +
Sbjct: 706 PRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNI 765

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +   L E     A+ ++ I+  Y  QG    ++ L
Sbjct: 766 VSCNLNERELQIAVNYSSILDQYLPQGTSEASVIL 800



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 244/519 (47%), Gaps = 20/519 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+ Y + G  E A  +F  ++  G  PTV+ Y  I++    +  F  I+ +   M   
Sbjct: 244 TLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 303

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+  NV  YN ++ A  K+  +  A + +  M   GC PD V+Y T++S  C+ G+V EA
Sbjct: 304 GLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEA 363

Query: 155 RE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            + L    G G+      Y  LI+  CK+   + A   L EM +RG  P+++TY  ++  
Sbjct: 364 DQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 423

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           L   G V+ +L I  +M  RG  P+   +  L+ G     +   A  L   M+ +  LP+
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 483

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
              Y+TL+ G   NG++DEA  +     E    P +  Y+A+I G+ K G +  A    N
Sbjct: 484 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 543

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM     +P+   Y+ ++    + +    A  +  +M    C PN VT+ + I G C  G
Sbjct: 544 RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG 603

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  ++K+  +M+    +PN+ TY+ L+    +  ++ +A     E+       N VT+N
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFN 663

Query: 450 TILHGVCRAGMVV-----EAFQ---------LLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
            +++G  + G          FQ           G+M+ +G    +  +N I+   C+ G 
Sbjct: 664 YLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGM 723

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
              A+QL +++   G   PD +S+ +LL G+C  G  +E
Sbjct: 724 FRTALQLSNKMTSKG-CIPDSVSFVALLHGVCLEGRSKE 761



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 258/559 (46%), Gaps = 46/559 (8%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL-VEM 126
           Y+ +L  L     FS +  +  NM+ + M P     +I+++A   +  V+ A +L    +
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----GSG---VSVYNA--LINGLCK 177
                 PD ++  ++++ + KLG++E AR+L        G+G   V  Y+   ++ GLCK
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCK 216

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           E K+EE   L+ +   +G  PN+I Y+T+I   C  G++E + G+  ++ ++G  P + +
Sbjct: 217 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 276

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +++ G+   G       L   M   G   NV  Y+T+I     +G + +AV     M 
Sbjct: 277 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 336

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E  C P++ TY+ LI G  + G +  A Q+  + +  G  PN  +YT ++   C+   + 
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 396

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK--------------------- 396
           +A + + +M      P+ VT+   + GL   G VD A+                      
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456

Query: 397 --------------LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
                         LL +M     LP+   Y  L+DG +R   + EA +L     + G+ 
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
             IV YN ++ G C+ GM+ +A   + +M       D  T++ +I  Y KQ  ++ A Q 
Sbjct: 517 PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGA-QK 575

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           + R     +  P++++YTSL+ G C  G +  +    ++M   G+ PN  T+++L+ S  
Sbjct: 576 MFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFC 635

Query: 563 SNLGHLGPVYILDDIMANK 581
                +      ++++ NK
Sbjct: 636 KEAKLIDAASFFEEMLMNK 654



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 154/355 (43%), Gaps = 60/355 (16%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +K ++   + LL +M  + V     V+ ++++ + R G  ++A K+F    E G
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYS---NMKRDGMEPNVFTYNILLKALCKNNRVD 117
           + P +  YN ++       +F M+    +    MK+  + P+ FTY+ ++    K + +D
Sbjct: 515 MNPGIVGYNAMIKGYC---KFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLD 571

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVYNALI 172
           GA K+  EM    C P+ V+YT++++  C+ G +  +    RE+ A      V  Y+ LI
Sbjct: 572 GAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILI 631

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVIT------------------------------ 202
              CKE K+ +A     EM+     PN +T                              
Sbjct: 632 GSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSM 691

Query: 203 -------------------YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
                              Y++I+  LC  G   T+L +  +M  +GC P+  SF +LL 
Sbjct: 692 FLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLH 751

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           G  L GR+ E  ++ +  + E  L   V YS+++      G+ + +V +    EE
Sbjct: 752 GVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTSEASVILQTMFEE 806


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 244/446 (54%), Gaps = 15/446 (3%)

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRF-------GSGVSVYNALINGLCKEHKIEEA 184
           DAVSY T+++++C+ G  + A  L  AM          + VS Y  L+  LC +   ++A
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS-YTVLMRALCADRLADQA 134

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M   G+  +V+TY T+I  LCD   V+ ++ ++G+M   G  PN+  ++SLL+G
Sbjct: 135 VGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   GR  +   ++  M  +G  P+VV Y+ LI  LC  G   +A  V   M      PN
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY+ LI+   K G++  A  +  +M   G +P+VV Y  ++K L       +A  L+E
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314

Query: 365 KMAFEN--CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +M        PN VTFN+ I+GLC  GR+  A ++   M++  C+ N+ TYN L+ GLLR
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           V++V++A EL+ E+   G++ +  TY+ ++ G C+   V  A  LL  M   G + +   
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  ++ A C+QG +  A  L + +     +  D+++Y++++ G C +G ++ A   L+ +
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
           ++EG+ P+  T+++++ ++F+  G +
Sbjct: 493 VDEGLTPDAVTYSIVI-NMFAKSGDM 517



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 243/485 (50%), Gaps = 17/485 (3%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMG---NKGCAPDAVSYTTIVSSICK-------L 148
           +  +YN +L ALC+    D A  LL  M    +  C P+AVSYT ++ ++C        +
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 149 GQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           G +   R   +R  + V  Y  LI GLC   ++++A  L+ EM + GI+PNV+ YS+++ 
Sbjct: 136 GLLRSMRSAGVR--ADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G  E    +  +M  +G  P++  +T L+      G+  +A  + + M+R G  P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           NVV Y+ LI+ +C  GS+ EA+ V  +M E    P+V TY+ LI G +    +  A  + 
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 329 NRMI--SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
             M+   N   PNVV +  +++ LC      QA  +   M    C  N VT+N  I GL 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V  AM+L+D+M      P+  TY+ L+ G  ++ +V  A +L++ +   GI+  + 
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y  +L  +C  GM+  A  L  +M      LD + ++ +I+  CK G +  A +LL  I
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSI 492

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G   PD ++Y+ ++     SG M+ A   L++M   G  P+ A ++ L++  +S  G
Sbjct: 493 VDEG-LTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQG-YSTKG 550

Query: 567 HLGPV 571
            +  V
Sbjct: 551 EINKV 555



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 231/444 (52%), Gaps = 10/444 (2%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           LA+QA+ +   +R  G++  V  Y  ++  L           +   M   G+EPNV  Y+
Sbjct: 130 LADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYS 189

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRF 161
            LL+  CK+ R +   K+ VEM  KG  PD V YT ++ S+CK+G+ ++A    ++ +R 
Sbjct: 190 SLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRR 249

Query: 162 G--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G    V  YN LIN +CKE  ++EA  +L +M ++G+ P+V+TY+T+I  L DV  ++ +
Sbjct: 250 GLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEA 309

Query: 220 LGILGQMFVRGCN---PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +L +M VRG N   PN+ +F S+++G    GR  +A  +   M   G + N+V Y+ L
Sbjct: 310 MWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GL     + +A+ +  +M      P+  TYS LI GF K   +  A  + + M   G 
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P +  Y  ++  +C+  M  +A +L  +M   N P + V ++T I G C  G +  A +
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  +      P+  TY+ +++   +   ++ A  ++ ++   G   ++  +++++ G  
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDA 480
             G + +  +L+ +M+ +   LD+
Sbjct: 548 TKGEINKVLELIREMITKNIALDS 571



 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 229/449 (51%), Gaps = 8/449 (1%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P    Y  ++ AL A+        +  +M+  G+  +V TY  L++ LC    VD A +
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLC 176
           L+ EM   G  P+ V Y++++   CK G+ E+  ++ +          V +Y  LI+ LC
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  K ++A  ++  MV RG++PNV+TY+ +I+ +C  G+V+ ++G+L +M  +G  P++ 
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           ++ +L+KG        EA  L   M+R   +  PNVV ++++I GLC  G M +A  V  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRA 351

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            MEE  C  N+ TY+ LI G  +   +  A ++ + M S G  P+   Y+ ++K  C+  
Sbjct: 352 MMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMW 411

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A  L+  M      P    +   +  +C  G ++ A  L ++M     L ++  Y+
Sbjct: 412 QVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPL-DVVAYS 470

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++ G  +   +K A EL+  I   G+  + VTY+ +++   ++G +  A  +L +M   
Sbjct: 471 TMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           G   D   F+ +I  Y  +G++N  ++L+
Sbjct: 531 GFLPDVAVFDSLIQGYSTKGEINKVLELI 559



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 211/408 (51%), Gaps = 8/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  E+D    L+ +M   G+  +  V+ S++  Y + G  E   K+F  + E G
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V +Y  ++D+L    +    + +   M R G+EPNV TYN+L+  +CK   V  A 
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-------VSVYNALIN 173
            +L +M  KG APD V+Y T++  +  + +++EA  L      G       V  +N++I 
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQ 335

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLC   ++ +AF +   M + G   N++TY+ +I  L  V  V  ++ ++ +M   G  P
Sbjct: 336 GLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEP 395

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +++ L+KG+    +   A DL + M   G  P +  Y  L+  +C  G M+ A ++ 
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF 455

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +N+ P +V  YS +I G  KAG+L  A ++   ++  G +P+ V Y+ ++ +  ++
Sbjct: 456 NEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKS 514

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
                A+ ++++M      P+   F++ I+G    G ++  ++L+ +M
Sbjct: 515 GDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 216/443 (48%), Gaps = 10/443 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+  GV      + ++I         ++A+++   + E G++P V +Y+ +L    
Sbjct: 137 LLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYC 196

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  ++  M   G+EP+V  Y  L+ +LCK  +   A+ ++  M  +G  P+ V
Sbjct: 197 KSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV 256

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +CK G V+EA    ++++ +     V  YN LI GL    +++EA WLL EM
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 192 VDRG---IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
           V RG   + PNV+T++++I  LCD+G +  +  +   M   GC  N+ ++  L+ G L  
Sbjct: 317 V-RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            +  +A +L + M   G  P+   YS LI G C    +D A  +   M +    P +  Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             L+    + G +  A  ++N M  N    +VVAY+ M+   C+      A  L++ +  
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E   P+ VT++  I      G ++ A  +L QM     LP++  ++ L+ G      + +
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK 554

Query: 429 AFELVTEIEKCGIQLNIVTYNTI 451
             EL+ E+    I L+    +T+
Sbjct: 555 VLELIREMITKNIALDSKIISTL 577



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 149/290 (51%), Gaps = 12/290 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEG---VSCSEGVFISVINSYRRVGLAEQALKMFYRIR 57
           +I+ L +  E+D   +LL++M V G   V  +   F SVI     +G   QA ++   + 
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           E G    +  YN ++  LL  ++      +   M   G+EP+ FTY+IL+K  CK  +VD
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMRFGSGVSVYNALIN 173
            A  LL  M ++G  P+   Y  ++ ++C+ G +E AR    E+   F   V  Y+ +I+
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIH 474

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G CK   ++ A  LL  +VD G+ P+ +TYS +I+     G++E + G+L QM   G  P
Sbjct: 475 GACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLP 534

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
           ++  F SL++GY   G  ++  +L    IRE    N+   S +I  L ++
Sbjct: 535 DVAVFDSLIQGYSTKGEINKVLEL----IREMITKNIALDSKIISTLSTS 580


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 258/494 (52%), Gaps = 18/494 (3%)

Query: 88  YSNMKRDG---MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
           Y+ M R G   + P V TY IL+   C+ +R+D  +  L  +  KG   +A+++T ++  
Sbjct: 72  YNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 145 ICKLGQVEEARELAMRFGSGVS----VYNA--LINGLCKEHKIEEAFWLLCEMVD---RG 195
           +C   +  +A ++ +R  + +S    V++   L+ GLC E++ +EA  L   M D    G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGG 191

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             P+V++Y+T+I+     G+   +     +M  R  +P++ +++S++     G    +A 
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV-----SYQMEENSCPPNVTTYSA 310
           ++   M++ G +PN   Y++++HG CS+G   EA+       S  +E +   P++ TY  
Sbjct: 252 EVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCT 311

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+ G+A  G L+G   + + M+ NG  P+   Y  ++    +     +A  +  KM  + 
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+   I  LC  GRV+ AM   +QM      P    YN L+ GL   N+ + A 
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           EL+ E+   GI LN + +N+I+   C+ G V+E+ +L   M+  G K D IT++ +I  Y
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C  GK++ A++LL  +   G   P+ ++Y +L+ G C    M +A +  ++M + G+ P+
Sbjct: 492 CLAGKMDEAMKLLSGMVSVG-LKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPD 550

Query: 551 FATWNVLVRSLFSN 564
             T+N++++ LF  
Sbjct: 551 IITYNIILQGLFQT 564



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 252/518 (48%), Gaps = 15/518 (2%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV  Y  ++      +R  +      N+ + G      T+  LLK LC + R   A 
Sbjct: 83  VTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 121 KL-LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG--------VSVYNAL 171
            + L  M    C PD  S T ++  +C   + +EA EL      G        V  Y  +
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ING  KE    +A+    EM+DR I P+V+TYS+II++LC    ++ ++ +L  M   G 
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR-----EGFLPNVVAYSTLIHGLCSNGSM 286
            PN  ++TS++ GY   G+  EA     ++       +G  P++  Y TL+ G  + G++
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
               ++   M  N   P+   Y+ LI  +AK G +  A  ++++M   G +P+ V Y  +
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           + +LC++     A    E+M  E   P  + +N+ I GLC C + + A +L+ +M     
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
             N   +N ++D   +  RV E+ +L   + + G++ +I+TY+T++ G C AG + EA +
Sbjct: 443 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMK 502

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL  M+  G K + +T+  +I  YCK  ++ +A+ L   +   G  +PDII+Y  +L G+
Sbjct: 503 LLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG-VSPDIITYNIILQGL 561

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             +     A     ++   G     +T+N+++  L  N
Sbjct: 562 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKN 599



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 249/530 (46%), Gaps = 14/530 (2%)

Query: 46  AEQALKMFYRI---REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           +++AL++ + +   R  G  P V  Y  +++    E         Y  M    + P+V T
Sbjct: 174 SQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVT 233

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           Y+ ++ ALCK   +D A ++L  M   G  P+  +YT+I+   C  GQ +EA     +  
Sbjct: 234 YSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVR 293

Query: 163 SG----------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           S           ++ Y  L+ G   +  +     LL  MV  GI P+   Y+ +I +   
Sbjct: 294 SDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAK 353

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G V+ ++ +  +M  +G NP+  ++ +++      GR  +A   + +MI EG  P  + 
Sbjct: 354 QGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 413

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y++LIHGLC+    + A  +  +M +     N   ++++ID   K G ++ + ++++ M+
Sbjct: 414 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 473

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G  P+++ Y+ ++   C      +A  L+  M      PNTVT+ T I G C   R+ 
Sbjct: 474 RIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMG 533

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+ L  +M+     P+I TYN +L GL +  R   A EL   I + G Q+ + TYN IL
Sbjct: 534 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 593

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           HG+C+  +  +A ++   + +   KL+A TFNI+I A  K G+   A  L       G  
Sbjct: 594 HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNG-L 652

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            P+  +Y  +   I   G ++E       M + G   +    N +VR L 
Sbjct: 653 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELL 702



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 234/487 (48%), Gaps = 10/487 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-----LKPTV 65
           +D    +L  M   GV  +   + S+++ Y   G  ++A+    ++R  G     L+P +
Sbjct: 247 MDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDI 306

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y  +L     +     ++ +   M R+G+ P+ + YNIL+ A  K  +VD A  +  +
Sbjct: 307 ATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSK 366

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHK 180
           M  +G  PDAV+Y  ++  +CK G+VE+A     + +      G  VYN+LI+GLC  +K
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            E A  L+ EM+DRGI  N I +++II S C  G V  S  +   M   G  P+I ++++
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ GY L G+  EA  L + M+  G  PN V Y TLI+G C    M +A+ +  +ME + 
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG 546

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P++ TY+ ++ G  +      A +++ R+  +G    +  Y  ++  LC+N +   A 
Sbjct: 547 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 606

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            + + +   +      TFN  I  L   GR   A  L         +PN  TY  + + +
Sbjct: 607 RMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENI 666

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           +    ++E  +L   +E  G  ++    N I+  + + G +  A   L  +  +   L+A
Sbjct: 667 IGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA 726

Query: 481 ITFNIII 487
            T ++ I
Sbjct: 727 STASLFI 733



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 211/451 (46%), Gaps = 14/451 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++    K  + G+  LL  M   G+     V+  +I +Y + G  ++A+ +F ++R+ G
Sbjct: 312 LLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG 371

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y  ++  L    R       +  M  +G+ P    YN L+  LC  N+ + A 
Sbjct: 372 LNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 431

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGL 175
           +L++EM ++G   + + + +I+ S CK G+V E+    +L +R G    +  Y+ LI+G 
Sbjct: 432 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGY 491

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   K++EA  LL  MV  G+ PN +TY T+I+  C +  +  +L +  +M   G +P+I
Sbjct: 492 CLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDI 551

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  +L+G     RT  A +L+ R+   G    +  Y+ ++HGLC N   D+A+    +
Sbjct: 552 ITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL----R 607

Query: 296 MEENSCPPNVT----TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           M +N C  ++     T++ +ID   K G    A  ++    SNG  PN   Y  M + + 
Sbjct: 608 MFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENII 667

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
              +  +   L   M    C  ++   N  ++ L   G +  A   L  + +       +
Sbjct: 668 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 727

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           T +  +D LL   + +E    + E  K  I+
Sbjct: 728 TASLFID-LLSGGKYQEYHRFLPEKYKSFIE 757


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 264/540 (48%), Gaps = 6/540 (1%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           +GVS    +F + IN++ + G  E+A+++F ++ E G+ P V  YN ++D L    R+  
Sbjct: 246 KGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDE 305

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                  M   G+EP + TY+IL+K L K  R+  AY +L EM  KG  P+ + Y  ++ 
Sbjct: 306 AFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLID 365

Query: 144 SICKLGQVEEARELA-MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S+ + G + +A E+  +    G+S+    YN LI G CK  + + A  LL EM+  G + 
Sbjct: 366 SLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNV 425

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  +++++I  LC     +++L  +G+M +R  +P     T+L+ G    G+  +A +LW
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            + + +GFL +    + L+HGLC  G ++E   +  ++       +  +Y+ LI G    
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
             L  A    + M+  G  P+   Y+ +++ L   N   +A             P+  T+
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           +  I G C   R +   KL D+M      PN   YN L+    R  R+  A EL  +++ 
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            GI  N  TY +++ G+     V EA  LL +M +EG + +   +  +I  Y K G++  
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            ++ L R       +P+ I+YT ++ G    G + EA   L +M  +GI P+  T+   +
Sbjct: 726 -VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFI 784



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 277/538 (51%), Gaps = 8/538 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           AL +F  +   G+ P+    N +L +L+    F      +  + + G+ P+V+ +   + 
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAIN 260

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGV 165
           A CK  +V+ A +L  +M   G  P+ V+Y T++  +   G+ +EA   +E  +  G   
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320

Query: 166 SV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           ++  Y+ L+ GL K  +I +A+ +L EM ++G  PNVI Y+ +I SL + G++  ++ I 
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIK 380

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M  +G +    ++ +L+KGY   G+   A  L   M+  GF  N  +++++I  LCS+
Sbjct: 381 DLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSH 440

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
              D A+    +M   +  P     + LI G  K G    A ++W + ++ G   +    
Sbjct: 441 HMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTS 500

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  LC+     +   + +++       + V++NT I G CG  ++D A   +D+M +
Sbjct: 501 NALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVK 560

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY+ L+ GLL +N+V+EA +   + ++ G+  ++ TY+ ++ G C+A    E
Sbjct: 561 KGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEE 620

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +L  +M+    + + + +N +I AYC+ G+++ A++L + ++  G  +P+  +YTSL+
Sbjct: 621 GQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG-ISPNSATYTSLI 679

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G+     ++EA + L++M  EG+ PN   +  L+   +  LG +  V  L   M +K
Sbjct: 680 KGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDG-YGKLGQMVKVECLLREMHSK 736



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 236/485 (48%), Gaps = 9/485 (1%)

Query: 104 NILLKALCKNNRVDGAY---KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           ++L++  C   + DG Y    +   + NKG  P   +   +++S+ +  + ++  E    
Sbjct: 184 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHV 243

Query: 161 FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GVS    ++   IN  CK  K+EEA  L  +M + G+ PNV+TY+T+I  L   G  
Sbjct: 244 VCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRY 303

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +     +M  RG  P + +++ L+KG     R  +A  +   M  +GF PNV+ Y+ L
Sbjct: 304 DEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNL 363

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  L   GS+++A+ +   M         +TY+ LI G+ K+G    A ++   M+S G 
Sbjct: 364 IDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGF 423

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           + N  ++T ++ +LC ++MF  A   + +M   N  P      T I GLC  G+   A++
Sbjct: 424 NVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVE 483

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  +      L +  T N LL GL    +++E F +  EI   G  ++ V+YNT++ G C
Sbjct: 484 LWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCC 543

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               + EAF  + +M+ +G K D  T++I+I       KV  AIQ     +  G   PD+
Sbjct: 544 GNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNG-MIPDV 602

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +Y+ ++ G C +   +E      +M++  + PN   +N L+ + +   G L     L +
Sbjct: 603 YTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGA-YCRSGRLSMALELRE 661

Query: 577 IMANK 581
            M +K
Sbjct: 662 DMKHK 666



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 188/440 (42%), Gaps = 40/440 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L E   ++    +   M  +G+S +   + ++I  Y + G A+ A ++   +   G
Sbjct: 363 LIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIG 422

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                  +  ++  L + + F         M    M P       L+  LCK+ +   A 
Sbjct: 423 FNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAV 482

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSV----YNALINGL 175
           +L ++  NKG   D  +   ++  +C+ G++EE   +     G G  +    YN LI+G 
Sbjct: 483 ELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGC 542

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   K++EAF  + EMV +G+ P+  TYS +I  L ++  VE ++   G     G  P++
Sbjct: 543 CGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDV 602

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++++ ++ G     RT E   L++ M+     PN V Y+ LI   C +G +  A+ +   
Sbjct: 603 YTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELRED 662

Query: 296 MEENSCPPNVTTY-----------------------------------SALIDGFAKAGN 320
           M+     PN  TY                                   +ALIDG+ K G 
Sbjct: 663 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQ 722

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           ++    +   M S    PN + YT M+    ++    +A  L+ +M  +   P+++T+  
Sbjct: 723 MVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKE 782

Query: 381 FIKGLCGCGRVDWAMKLLDQ 400
           FI G    G V  A K  D+
Sbjct: 783 FIYGYLKQGGVLQAFKGSDE 802


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 264/525 (50%), Gaps = 9/525 (1%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           +Y R  +   AL +  ++++     +++ YN +L  L   N   ++  +Y+ +K  G   
Sbjct: 188 AYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSN---IMWDVYNEIKVSGTPQ 244

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL- 157
           + +T +I++  LC+ +R   A     +   K   P  VS+ TI+S  CKLG V+ A+   
Sbjct: 245 SEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF 304

Query: 158 AMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            M    G+      YN LI+GLC    + EA  L  +M + G++P+++TY+ +      +
Sbjct: 305 CMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLL 364

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +  I+ +M ++G NPN+ ++T L+ G+   G   EA  L+  MI  GF  ++++ 
Sbjct: 365 GLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISS 424

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + L+  LC +  +D A  +  +ME N   P++ TYS LI G  K G +  A  ++ +M S
Sbjct: 425 TVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCS 484

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           N   PN + +  ++  LC+     QA    + +   N   + + +N  I G    G    
Sbjct: 485 NRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTRE 544

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+KL  Q+ +    P I T+N L+ G     ++ +A  L+  I+  G++ N VTY T+++
Sbjct: 545 AVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMN 604

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             C  G +    +LL +M  +      IT+ ++I   CKQ K+  + QLL+ +   G   
Sbjct: 605 VYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVG-LT 663

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           PD +SY +++   C +  M++AF    KML   + P   T+N+L+
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILI 708



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 277/547 (50%), Gaps = 7/547 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++++ Y ++G  + A   F  + + GL P    YN ++  L           + ++M+
Sbjct: 284 FNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDME 343

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G+EP++ TYNIL K       ++GA+ ++ +M  KG  P+ V+YT ++   C++G VE
Sbjct: 344 NHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVE 403

Query: 153 EAREL---AMRFGSGVSVYNA--LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EA +L    +  G  +S+ ++  L+  LCK  +++ AF L CEM   G+ P++ITYST+I
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLI 463

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC  G V+ ++ +  +M      PN     ++L G    G+  +A   ++ +I     
Sbjct: 464 HGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLS 523

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            +++ Y+ +I G    G+  EAV +  Q+ E    P + T+++L+ GF     L  A ++
Sbjct: 524 LDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRL 583

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            + +  +G  PN V YT ++ V C+         L+ +M  +   P  +T+   IKGLC 
Sbjct: 584 LDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCK 643

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             ++  + +LL+ M      P+  +YN ++    +   +++AF+L  ++    ++   VT
Sbjct: 644 QWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVT 703

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN +++G C  G + +A  LL  +      L+   +  II A+C +G V+ A+    ++ 
Sbjct: 704 YNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMV 763

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
             G +   I  Y++++  +C    + EA  +   ML++G+CP+   + VL+ + F   GH
Sbjct: 764 EKG-FEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNA-FHQCGH 821

Query: 568 LGPVYIL 574
           L   + L
Sbjct: 822 LNSEFEL 828



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/547 (24%), Positives = 266/547 (48%), Gaps = 6/547 (1%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           ++KV G   SE     V++   R    + A+  F        +P+V  +N I+       
Sbjct: 236 EIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLG 295

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
              +    +  M + G+ P+ ++YNIL+  LC    +  A  L  +M N G  PD V+Y 
Sbjct: 296 FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYN 355

Query: 140 TIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
            +      LG +  A  +  +         +  Y  LI G C+   +EEA  L  EM+  
Sbjct: 356 ILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISH 415

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G   ++I+ + ++ SLC    V+ +  +  +M   G  P++ ++++L+ G    G   +A
Sbjct: 416 GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQA 475

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L+ +M     +PN + +  ++ GLC  G + +A      +  ++   ++  Y+ +IDG
Sbjct: 476 ILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDG 535

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           + K GN   A +++ ++   G SP +V +  ++   C N    QA  L++ +      PN
Sbjct: 536 YIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            VT+ T +   C  G +   ++LL +MK     P   TY  ++ GL +  +++E+ +L+ 
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLE 655

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           +++  G+  + V+YNTI+   C+A  + +AFQL  KML+   +  ++T+NI+I  +C  G
Sbjct: 656 DMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYG 715

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            + +A  LL  ++   + N +  +YT+++   C  G + +A +Y ++M+ +G   +   +
Sbjct: 716 DLKDADNLLVSLQ-NRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDY 774

Query: 555 NVLVRSL 561
           + ++  L
Sbjct: 775 SAVIGRL 781



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 215/429 (50%), Gaps = 5/429 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +Y  M   G + ++ +  +LL +LCK+ +VD A+KL  EM   G  PD ++Y+T++  +C
Sbjct: 408 LYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLC 467

Query: 147 KLGQVEEARELAMRFGSGVSVYNALING-----LCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G+V++A  L  +  S   + N+LI+G     LC++ KI +A      ++   +  ++I
Sbjct: 468 KQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDII 527

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            Y+ +I      GN   ++ +  Q+  +G +P I +F SL+ G+ +  +  +A  L + +
Sbjct: 528 LYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI 587

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              G  PN V Y+TL++  C  G+M   + +  +M+  +  P   TY+ +I G  K   L
Sbjct: 588 KLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKL 647

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             + Q+   M + G +P+ V+Y  +++  C+     +A  L +KM   N  P +VT+N  
Sbjct: 648 QESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNIL 707

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C  G +  A  LL  ++  +   N   Y  ++        V +A     ++ + G 
Sbjct: 708 INGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF 767

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           +++I  Y+ ++  +C+  +V EA      ML +G   D   F +++ A+ + G +N+  +
Sbjct: 768 EVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFE 827

Query: 502 LLDRIRGGG 510
           LL  +   G
Sbjct: 828 LLAEMIKSG 836



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 162/336 (48%), Gaps = 5/336 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L EK +I   +     +    +S    ++  +I+ Y + G   +A+K++ ++ E G+ PT
Sbjct: 501 LCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPT 560

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           +  +N ++       + S    +   +K  G+EPN  TY  L+   C+   +    +LL 
Sbjct: 561 IVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLS 620

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
           EM  K   P  ++YT ++  +CK  +++E+ +L     A+        YN +I   CK  
Sbjct: 621 EMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKAR 680

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            + +AF L  +M+   ++P  +TY+ +I+  C  G+++ +  +L  +  R  N N +++T
Sbjct: 681 DMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYT 740

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +++K +   G   +A   + +M+ +GF  ++  YS +I  LC    + EA      M  +
Sbjct: 741 TIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSD 800

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
              P+   +  L++ F + G+L    ++   MI +G
Sbjct: 801 GVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 177/405 (43%), Gaps = 8/405 (1%)

Query: 5   LGEKC---EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           LG  C   ++D    L  +M+  G+      + ++I+   + G  +QA+ ++ ++    +
Sbjct: 428 LGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRI 487

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P   I+  IL  L  + + S     +  +    +  ++  YNI++    K      A K
Sbjct: 488 IPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVK 547

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLC 176
           L  ++G KG +P  V++ +++   C   ++ +AR L               Y  L+N  C
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +E  ++    LL EM  + I P  ITY+ +I  LC    ++ S  +L  M   G  P+  
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+ ++++ +       +A  L+++M+     P  V Y+ LI+G C  G + +A ++   +
Sbjct: 668 SYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSL 727

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +      N   Y+ +I      G++  A   + +M+  G   ++  Y+ ++  LC+  + 
Sbjct: 728 QNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLV 787

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +A      M  +   P+   F   +     CG ++   +LL +M
Sbjct: 788 TEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 119/291 (40%), Gaps = 40/291 (13%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +Q+  +G+S +   F S++  +       QA ++   I+  GL+P    Y  +++   
Sbjct: 548 LYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYC 607

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E     +  + S MK   + P   TY +++K LCK  ++  + +LL +M   G  PD V
Sbjct: 608 EEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQV 667

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLC--------------- 176
           SY TI+ + CK   + +A +L  +            YN LING C               
Sbjct: 668 SYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSL 727

Query: 177 ----------------KEH----KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                           K H     +++A     +MV++G + ++  YS +I  LC    V
Sbjct: 728 QNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLV 787

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             +      M   G  P+   F  LL  +   G  +   +L   MI+ G+L
Sbjct: 788 TEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 173/619 (27%), Positives = 285/619 (46%), Gaps = 91/619 (14%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL----LAENR 80
           GV+  E  + +++  + R+   E AL++ + +   G  P+    + ++D L    L E  
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           FS+       +   GM PNVF YN L+  LCKN R D A +L  EM  +G  P+ V+Y  
Sbjct: 323 FSLA----CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAI 378

Query: 141 IVSSICKLGQVEEAREL--AMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDR 194
           ++ ++CK G +E+A  L   MR   G+ V    YN+LING CK+  ++ A  LL  MV  
Sbjct: 379 LIHALCKRGMIEDALCLFDKMR-DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE 437

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P   +YS +I+ LC  G++ + + +  +M  RG   N ++FT+L+ G+    +  EA
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID- 313
           + L+++MI    +PN V ++ +I G C  G++ +A  +  QM E    P+  TY +LI  
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557

Query: 314 ----------------------------------GFAKAGNLLGASQIWNRMI------- 332
                                             GF + G       +W+ M        
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLD 617

Query: 333 ----------------------------SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
                                         G  P+ + YTCM+  L +     QA +  +
Sbjct: 618 LVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWD 677

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   PNTVT    I  LC  G +  A  L  +M     LPN  TYN  LD      
Sbjct: 678 QMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEG 737

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +++A +L + + + G   +IV++N ++ G+C+AG + EA  L+ K+   G   D I+++
Sbjct: 738 DMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYS 796

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL-WGICN-SGGMQEAFIYLQKM 542
            II+  CK G +N A +L + +   G   PD+++Y   + W  CN  G   +A      M
Sbjct: 797 TIIHELCKMGDINKAFELWNEMLYKG-LKPDVVAYNIFIRW--CNVHGESDKALGIYTNM 853

Query: 543 LNEGICPNFATWNVLVRSL 561
           +  G+ PN+ T+  L+  +
Sbjct: 854 IRSGVQPNWDTYRALLSGI 872



 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 277/532 (52%), Gaps = 9/532 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+KL +    D    L ++M   G+  +E  +  +I++  + G+ E AL +F ++R+ G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K TV  YN +++    +        + S M ++G+ P   +Y+ L+  LC+N  +    
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGL 175
           +L  EM  +G A +  ++T +++  CK  +++EA  L  +   S V      +N +I G 
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I +AF L  +MV+ G+ P+  TY ++IS LC    V  +   +  +       N 
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S T+LL G+   GR  E   LW+ M   G   ++V+++ +++        +++  +  +
Sbjct: 584 FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFRE 643

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+E    P+   Y+ +ID  +K  N++ A   W++M+ +G SPN V +T ++  LC++  
Sbjct: 644 MKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGY 703

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L ++M   N  PN  T+N F+      G ++ A  L   M Q   L +I ++N 
Sbjct: 704 LGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGH-LASIVSFNI 762

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +  +++EA +L+++I + G   + ++Y+TI+H +C+ G + +AF+L  +ML +G
Sbjct: 763 LIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKG 822

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGI 526
            K D + +NI I      G+ + A+ +  + IR G + N D  +Y +LL GI
Sbjct: 823 LKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWD--TYRALLSGI 872



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 168/570 (29%), Positives = 268/570 (47%), Gaps = 27/570 (4%)

Query: 23  VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV-------------KIYN 69
           V G+S S G+    +N Y     A Q L    +IR+F L   +              +Y 
Sbjct: 150 VLGLSLSSGI---TVNQYT----ASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYT 202

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             + A            +   M+ +G++ +   YN+L+  LCKN RV  A ++   M N 
Sbjct: 203 AGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNI 262

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSVYNA--LINGLCKEHKIEEA 184
           G   D V+Y T+V   C++ ++E A  +    +R G   S  N   +I+ L K+  +EEA
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L C++ D G+ PNV  Y+ +I  LC     + +  +  +M  RG  PN  ++  L+  
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   +A  L+++M  +G    V  Y++LI+G C  GS+D A  +   M +    P 
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +YS LI G  + G+L    ++   M   G + N   +T ++   C++    +A  L +
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM   N  PN VTFN  I+G C  G +  A +L DQM +    P+  TY  L+ GL   +
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V +A E V ++E     LN  +   +L+G  R G   E + L  +M + G KLD ++F 
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFT 622

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           II+YA  KQ     +  L   ++  G   PD I YT ++  +     M +A     +M+ 
Sbjct: 623 IIVYAALKQHDKEKSCVLFREMKEQGV-KPDDIFYTCMIDALSKEENMIQALNCWDQMVV 681

Query: 545 EGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +G  PN  T  VL+ +L  + G+LG   +L
Sbjct: 682 DGYSPNTVTHTVLINNLCKS-GYLGSAELL 710



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 265/544 (48%), Gaps = 6/544 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   GV   E V+ + I +Y      + A  +  R+   G+K +   YN ++  L 
Sbjct: 185 LFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLC 244

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      + + M   G+  +  TY  L+   C+   ++ A ++  +M   G  P   
Sbjct: 245 KNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEA 304

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + + ++  + K   VEEA  LA + G       V  YNALI+ LCK  + ++A  L  EM
Sbjct: 305 NCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEM 364

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG++PN +TY+ +I +LC  G +E +L +  +M  +G    ++ + SL+ GY   G  
Sbjct: 365 AGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSL 424

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L + M++EG  P   +YS LI GLC NG +   + +  +M E     N  T++AL
Sbjct: 425 DRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTAL 484

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+GF K   +  A++++++MI +   PN V +  M++  C      +A  L ++M     
Sbjct: 485 INGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+ + I GLC    V  A + +  ++    + N  +   LL G  R  R  E + 
Sbjct: 545 KPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYH 604

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  E+   G++L++V++  I++   +     ++  L  +M  +G K D I +  +I A  
Sbjct: 605 LWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALS 664

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+  +  A+   D++   G ++P+ +++T L+  +C SG +  A +  ++ML   + PN 
Sbjct: 665 KEENMIQALNCWDQMVVDG-YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 552 ATWN 555
            T+N
Sbjct: 724 FTYN 727



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 4/385 (1%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI  N  T S I+ SL  +     +  +  +M   G + + + +T+ ++ Y        A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             L  RM  EG   + V Y+ L++GLC N  + EAV V   M       +  TY  L+ G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           F +   L  A +I + MI  G  P+    + M+  L +  +  +A SL  K+      PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
              +N  I  LC   R D A +L  +M      PN  TY  L+  L +   +++A  L  
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++   GI++ +  YN++++G C+ G +  A  LL  M+ EG    A +++ +I   C+ G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 495 KVNNAIQLLDRIRGGG-EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            +++ ++L   +   G  WN    ++T+L+ G C    M EA     KM++  + PN  T
Sbjct: 458 DLSSCMELHREMAERGIAWNN--YTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVT 515

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIM 578
           +NV++   +  +G++   + L D M
Sbjct: 516 FNVMIEG-YCLVGNIRKAFQLYDQM 539



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 140/305 (45%), Gaps = 39/305 (12%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M V GV      F  ++ +  +    E++  +F  ++E G+KP    Y  ++DAL
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E         +  M  DG  PN  T+ +L+  LCK+  +  A  L  EM      P+ 
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 136 VSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEM 191
            +Y   +      G +E+A++L  AM  G   S+  +N LI GLCK  KI+EA  L+ ++
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKI 783

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G  P+ I+YSTII  LC +G++                                   
Sbjct: 784 TESGFSPDCISYSTIIHELCKMGDI----------------------------------- 808

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A +LWN M+ +G  P+VVAY+  I     +G  D+A+ +   M  +   PN  TY AL
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 312 IDGFA 316
           + G +
Sbjct: 869 LSGIS 873


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 236/448 (52%), Gaps = 22/448 (4%)

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSVY--------NALINGLCKEHKIEEAFWL 187
           V++T  +  +CK G++E+A E        +S          +++I  LCK  +++ A  L
Sbjct: 12  VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH-------SFTS 240
           L  M+ RG  P++ T+S +I+ LC    ++ +     Q F++G N  I        S+ S
Sbjct: 72  LETMIKRGYCPDMATHSMLINELCKADKIQEA-----QEFLQGMNRTISTRASSCFSYNS 126

Query: 241 LLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           LL       + H+A  +++ M+ E   +P+VV+YS LI G C    +  A  +  QM + 
Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +C PNVTTY+A ++G  + G +  A  ++  MIS GCSP+V+ Y+ ++          QA
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQA 246

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           H L E M    C PN VT+N  + GLC   + D A +L  +M +  C P+  TY  LL G
Sbjct: 247 HELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYG 306

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
              V ++++A E+  E+   G   ++V YN +L G  RAG   EA QL   M+    K D
Sbjct: 307 FCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            ++ NI+I    K  ++++A+++ +R+      +PD+++Y SL++G+C    + EA    
Sbjct: 367 TVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 426

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGH 567
           +++    + P+   +NVL+ ++++  GH
Sbjct: 427 KEIDRLKLSPDPHAFNVLLEAMYA-AGH 453



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 207/402 (51%), Gaps = 44/402 (10%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           T + +++ LCK  RVD A  LL  M  +G  PD  +++ +++ +CK  +++EA+E     
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 162 GSGVSV-------YNALINGLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDV 213
              +S        YN+L+N LCK  K+ +AF +   MV +R + P+V++YS +I   C +
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 214 -----------------------------------GNVETSLGILGQMFVRGCNPNIHSF 238
                                              G +  + G+  +M   GC+P++ ++
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           ++L+ G+ L  +  +A +L+  MI  G  PN V Y+ L+HGLC     DEA  +  +M E
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
             C P+  TY+ L+ GF   G +  A ++++ M+S G  P+VVAY C++K   +     +
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ-YECLPNITTYNELL 417
           A  L + M    C P+TV+ N  I GL    R+D A+++ ++M+Q + C P++ TYN L+
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            GL    R+ EA ++  EI++  +  +   +N +L  +  AG
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 186/364 (51%), Gaps = 19/364 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQM----KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR- 55
           +I +L +  +I   Q  LQ M         SC    + S++NS  +     QA  +F   
Sbjct: 90  LINELCKADKIQEAQEFLQGMNRTISTRASSCFS--YNSLLNSLCKAKKVHQAFAIFSTM 147

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           + E  + P V  Y+ ++D     +       +Y  M      PNV TYN  L  L +  R
Sbjct: 148 VSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGR 207

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------V 167
           +  A  +  EM + GC+PD ++Y+T++       + ++A EL   F + +S         
Sbjct: 208 IADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL---FEAMISRGCRPNAVT 264

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN L++GLCKE K +EA  L  +MV+RG DP+ +TY+T++   C+VG +E ++ +  +M 
Sbjct: 265 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMV 324

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +G +P++ ++  LLKG+   G+  EA  L+  M+     P+ V+++ +I GL     +D
Sbjct: 325 SKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLD 384

Query: 288 EAVSVSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +AV V  +ME++  C P++ TY++LI G      L  A +++  +     SP+  A+  +
Sbjct: 385 DAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVL 444

Query: 347 VKVL 350
           ++ +
Sbjct: 445 LEAM 448



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 173/355 (48%), Gaps = 45/355 (12%)

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEE----------NSCP---------------- 302
           N VA++  + GLC +G +++A      M+E           +C                 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 303 ------------PNVTTYSALIDGFAKAGNLLGASQI---WNRMISNGCSPNVVAYTCMV 347
                       P++ T+S LI+   KA  +  A +     NR IS   S +  +Y  ++
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRAS-SCFSYNSLL 128

Query: 348 KVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
             LC+    HQA ++   M  E +  P+ V+++  I G C    +  A KL  QM    C
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +PN+TTYN  L+GL+R  R+ +A  +  E+   G   +++TY+T++HG   A    +A +
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L   M+  G + +A+T+N +++  CK+ K + A +L  ++   G  +PD ++YT+LL+G 
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG-CDPDKVTYTTLLYGF 307

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           CN G +++A     +M+++G  P+   +N L++  F   G  G    L  +M ++
Sbjct: 308 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFF-RAGKPGEARQLFQVMVSR 361



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 31/287 (10%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           + +N   R G    A  ++  +   G  P V  Y+ ++       +    + ++  M   
Sbjct: 197 AFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  PN  TYN LL  LCK ++ D A++L  +M  +GC PD V+YTT++   C +G++E+A
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                     V V++                    EMV +G DP+V+ Y+ ++      G
Sbjct: 317 ----------VEVFD--------------------EMVSKGHDPDVVAYNCLLKGFFRAG 346

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAY 273
               +  +   M  R C P+  S   ++ G     R  +A +++ RM ++ G  P++V Y
Sbjct: 347 KPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTY 406

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           ++LI GLC    + EA+ V  +++     P+   ++ L++    AG+
Sbjct: 407 NSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 119/252 (47%), Gaps = 6/252 (2%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L  K  I   Q + ++M   G S     + ++I+ +      +QA ++F  +   G +P 
Sbjct: 202 LMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPN 261

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              YN +L  L  E++    + ++  M   G +P+  TY  LL   C   +++ A ++  
Sbjct: 262 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFD 321

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
           EM +KG  PD V+Y  ++    + G+  EAR+L     +         +N +I+GL K  
Sbjct: 322 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAK 381

Query: 180 KIEEAFWLLCEM-VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
           ++++A  +   M  D G  P+++TY+++I  LC    +  ++ +  ++     +P+ H+F
Sbjct: 382 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 441

Query: 239 TSLLKGYLLGGR 250
             LL+     G 
Sbjct: 442 NVLLEAMYAAGH 453



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 6/202 (2%)

Query: 366 MAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT---TYNELLDGLL 421
           MA E+  P N V +  F+ GLC  G+++ A +    M++           T + ++  L 
Sbjct: 1   MAVESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELC 60

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM--LIEGTKLD 479
           +  RV  A  L+  + K G   ++ T++ +++ +C+A  + EA + L  M   I      
Sbjct: 61  KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             ++N ++ + CK  KV+ A  +   +       PD++SY+ L+ G C    +  A    
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
           ++M++    PN  T+N  +  L
Sbjct: 181 KQMIDLNCVPNVTTYNAFLNGL 202


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 158/530 (29%), Positives = 260/530 (49%), Gaps = 42/530 (7%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           E +S   G+ + + N  +    + QAL+ F  +       ++  +N +L AL     +S 
Sbjct: 55  ERISLQHGLPMFIHNCKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQ 109

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           +  +Y  M   G+ PN FT NIL+  LC  NRV      +  +  +G  PD V+YT+   
Sbjct: 110 VFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTS--- 166

Query: 144 SICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
                                      LI GLC EH+I EA  L   M   G  PNV+TY
Sbjct: 167 ---------------------------LIKGLCMEHRISEATRLFIRMQKLGCWPNVVTY 199

Query: 204 STIISSLCDVGNVETSLGILGQM------FVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            T+I  LC  GN+  +L +  +M      +   C PNI S+  ++      G+  EA  L
Sbjct: 200 GTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRL 259

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           +N M+ +G  P+VV +S LI  LC  G + EA      M      P++ T+++LI+GF  
Sbjct: 260 FNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCL 319

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G+L  A +++  M S G  P+V++YT ++   C+     +A  L  +M      P+  T
Sbjct: 320 VGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKT 379

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           F   +KGL   G+V  A KL   +K +    N+   +  LDGL +   + EA EL  E++
Sbjct: 380 FCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELK 439

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              ++L+I ++N ++ G+C+A  +  A++L  K+  EG + D +T+ I+I  +CK G+V+
Sbjct: 440 SYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVD 499

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
           NA  L   +   G   P++++Y++LL G   +  ++E    L KM+ + +
Sbjct: 500 NANILFQMMEENG-CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDV 548



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 244/482 (50%), Gaps = 11/482 (2%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++ +  ++    Q   ++ ++   GL P     N +++ L   NR        + + R G
Sbjct: 97  LLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRG 156

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+V TY  L+K LC  +R+  A +L + M   GC P+ V+Y T++  +C+ G +  A 
Sbjct: 157 YIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLAL 216

Query: 156 ELAMRFGSGVS-----------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           +L     +G S            YN +I+ LCK  K +EA  L  EMVD+G+ P+V+T+S
Sbjct: 217 KLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFS 276

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +I +LC  G V  +   L  M +RG  P++ +FTSL++G+ L G    A +L+  M  +
Sbjct: 277 ALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSK 336

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G+ P+V++Y+ LI+G C   +++EA+ +  +M      P++ T+  L+ G   AG +  A
Sbjct: 337 GYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDA 396

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++  +  +    N+   +  +  LC+N    +A  L  ++   N   +  +FN  I G
Sbjct: 397 KKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDG 456

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   +++ A +L +++ Q    P++ TY  +++G  +  +V  A  L   +E+ G   N
Sbjct: 457 LCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPN 516

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           ++TY+ +LHG  +   + E  +LL KM+ +   L A  + I+     K  K    + +L 
Sbjct: 517 LLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576

Query: 505 RI 506
           R 
Sbjct: 577 RF 578



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 232/469 (49%), Gaps = 11/469 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M + G+S +      +IN    V    + L     I   G  P V  Y  ++  L 
Sbjct: 113 LYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLC 172

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK------G 130
            E+R S    ++  M++ G  PNV TY  L+K LC+   ++ A KL  EM N        
Sbjct: 173 MEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAIN 232

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
           C P+  SY  I+  +CK+G+ +EA+ L            V  ++ALI+ LCKE  + EA 
Sbjct: 233 CKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAK 292

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L  M+ RGI P++ T++++I   C VG+++++  +   M  +G  P++ S+T L+ GY
Sbjct: 293 KFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGY 352

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA  L+N M+R G  P++  +  L+ GL   G + +A  +   ++ ++ P N+
Sbjct: 353 CKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNL 412

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
              S  +DG  K G L  A +++N + S     ++ ++ C++  LC+      A  L EK
Sbjct: 413 YICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEK 472

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           ++ E   P+ VT+   I G C  G+VD A  L   M++  C PN+ TY+ LL G  + N+
Sbjct: 473 LSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNK 532

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           ++E  +L+ ++ +  + L    Y  +   V +     E   +L +  ++
Sbjct: 533 LEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFPVQ 581



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 220/465 (47%), Gaps = 50/465 (10%)

Query: 146 CKLGQVEEAR-----ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CK G +   +     +L MR    +  +N L+  L K     + F L  +M   G+ PN 
Sbjct: 70  CKKGNITSTQALQFFDLMMR---SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            T + +I+ LC+V  V   L  +  +  RG  P++ ++TSL+KG  +  R  EA+ L+ R
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS------CPPNVTTYSALIDG 314
           M + G  PNVV Y TLI GLC  G+++ A+ +  +M   +      C PN+ +Y+ +ID 
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             K G    A +++N M+  G  P+VV ++ ++  LC+  M  +A   +E M      P+
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 375 TVTFNTFIKGLCGCGRVDWA-----------------------------------MKLLD 399
             TF + I+G C  G +D A                                   MKL +
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M +    P++ T+  LL GL    +V +A +L   ++   +  N+   +  L G+C+ G
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNG 426

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA +L  ++     KLD  +FN +I   CK  K+  A +L +++   G   PD+++Y
Sbjct: 427 CLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEG-LQPDVVTY 485

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             ++ G C +G +  A I  Q M   G  PN  T++ L+   + N
Sbjct: 486 CIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKN 530



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 174/365 (47%), Gaps = 7/365 (1%)

Query: 15  QYLLQQMKVEGVSCSEGVFIS--VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           Q +L       ++C   +F    +I+   ++G  ++A ++F  + + G++P V  ++ ++
Sbjct: 220 QEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALI 279

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           D L  E            M   G+ P++FT+  L++  C    +D A +L + M +KG  
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYE 339

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL---AMRFGS--GVSVYNALINGLCKEHKIEEAFWL 187
           PD +SYT ++   CK   VEEA +L    +R G    +  +  L+ GL    K+ +A  L
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
              +    +  N+   S  +  LC  G +  ++ +  ++       +I SF  L+ G   
Sbjct: 400 FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCK 459

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             +   A +L+ ++ +EG  P+VV Y  +I+G C NG +D A  +   MEEN C PN+ T
Sbjct: 460 ARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLT 519

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           YSAL+ GF K   L    ++ ++MI    S     YT +  ++ ++    +   ++++  
Sbjct: 520 YSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFP 579

Query: 368 FENCP 372
            +  P
Sbjct: 580 VQKHP 584



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 99/222 (44%), Gaps = 5/222 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + L   M  +G       +  +I  Y +    E+A+K++  +   G  P +K + 
Sbjct: 322 DLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFC 381

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L    +      ++  +K   +  N++  ++ L  LCKN  +  A +L  E+ + 
Sbjct: 382 VLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSY 441

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
               D  S+  ++  +CK  ++E A EL  +         V  Y  +ING CK  +++ A
Sbjct: 442 NMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNA 501

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
             L   M + G  PN++TYS ++        +E  + +L +M
Sbjct: 502 NILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM 543


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/486 (30%), Positives = 243/486 (50%), Gaps = 43/486 (8%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++IN Y R G    AL +   I    + P    YN +L  L    ++     + + M
Sbjct: 182 TYTTLINGYCRSGRLADALAL---IASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R+   PN  T+   ++A C+N  +D A +LL  M   GC PD V Y+T+V+   + G+V
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 152 EEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           ++A EL   M        YNA + GLC   + E+   L+ EMV +   PN  T+S + S 
Sbjct: 299 DDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSC 358

Query: 210 LCDVGNVETSLGILGQMFVRG--------------------------------CNPNIHS 237
           LC  G V+ ++ +L QM   G                                C+P++ S
Sbjct: 359 LCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVIS 418

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F + LKG     R  +A +L  +M+RE      + ++ LI  LC NG ++ A+ V  QM 
Sbjct: 419 FNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMP 478

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +  C P++ TYS+LI+G ++ G +  A +++  M    C P++  Y  ++K LC+   + 
Sbjct: 479 KYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWE 535

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  LI  MA ++CPPN +TFN  I  LC  G VD A+++ +QM +Y   P+I TYN L+
Sbjct: 536 DAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALI 595

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G     R+ +A  L++ +     + + V+YN+ L G+CRA    EA +++ +ML     
Sbjct: 596 NGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCP 652

Query: 478 LDAITF 483
            + +TF
Sbjct: 653 PNEVTF 658



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 259/530 (48%), Gaps = 79/530 (14%)

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP-------------------------- 133
           V   NIL+K LC   R+  A ++L  +   G A                           
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAERLLAA 171

Query: 134 -------DAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEA 184
                  + V+YTT+++  C+ G++ +A  L  +M        YN ++ GLC   + E+A
Sbjct: 172 AGLSGAANVVTYTTLINGYCRSGRLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDA 231

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+ EMV     PN +T++T I + C  G ++ ++ +L +M   GC P++  +++L+ G
Sbjct: 232 EALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNG 291

Query: 245 YLLGGRTHEASDLWN--------------------------------RMIREGFLPNVVA 272
           +   GR  +A +L N                                 M+R+  LPN   
Sbjct: 292 FSEQGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEAT 351

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           +S L   LC NG +D A+ V  QM +  C P+   Y+ LI  F++ G +  A ++ N M 
Sbjct: 352 FSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM- 410

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
              CSP+V+++   +K LC+   +  A  LI +M  E+CP   +TFN  I  LC  GRV+
Sbjct: 411 --PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVN 468

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+++ +QM +Y C P+I TY+ L++GL     V+ A EL   +     + +I  YN +L
Sbjct: 469 NAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVL 525

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+CRA    +A +L+  M  +    + ITFNI+I + C++G V+ AI++ +++   G  
Sbjct: 526 KGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGS- 584

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
            PDI +Y +L+ G    G + +A    +++L+   C P+  ++N  ++ L
Sbjct: 585 TPDIFTYNALINGFSEQGRLDDA----RRLLSTMSCKPDAVSYNSALKGL 630



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 240/503 (47%), Gaps = 50/503 (9%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           NV TY  L+   C++ R+  A  L+  M     APD  +Y T++  +C   Q E+A  L 
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 159 MRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                         +   I   C+   ++ A  LL  M   G  P+V+ YST+++   + 
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V+ ++ +L  M    C PN   + + LKG  +  R  +   L   M+R+  LPN   +
Sbjct: 296 GRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S L   LC NG +D A+ V  QM +  C P+   Y+ LI  F++ G +  A ++ N M  
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM-- 410

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             CSP+V+++   +K LC+   +  A  LI +M  E+CP   +TFN  I  LC  GRV+ 
Sbjct: 411 -PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469

Query: 394 AMKLLDQMKQYECLPNITTY--------------------------------NELLDGLL 421
           A+++ +QM +Y C P+I TY                                N +L GL 
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLC 529

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R  R ++A EL++ + +     N +T+N +++ +C+ G+V  A ++  +M   G+  D  
Sbjct: 530 RAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIF 589

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N +I  + +QG++++A +LL  +       PD +SY S L G+C +   +EA   + +
Sbjct: 590 TYNALINGFSEQGRLDDARRLLSTM----SCKPDAVSYNSALKGLCRAERWKEAEEVVAE 645

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           ML     PN  T+    R    N
Sbjct: 646 MLRMKCPPNEVTFKYANRLFVPN 668



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 203/405 (50%), Gaps = 11/405 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL +M   G +    ++ +++N +   G  + A+++   +     KP    YN 
Sbjct: 263 LDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIEL---LNGMLCKPNTICYNA 319

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            L  L    R+  +  +   M R    PN  T+++L   LC+N  VD A ++L +M   G
Sbjct: 320 ALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYG 379

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           C PDAV Y T++ S  + G+V++A +L  +M     V  +NA + GLC+  + ++A  L+
Sbjct: 380 CRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELI 439

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+        +T++ +I SLC  G V  ++ +  QM   GC P+I +++SL+ G    
Sbjct: 440 VQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQ 499

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G    A +L+  M  +   P++  Y+ ++ GLC     ++A  +   M    CPPN  T+
Sbjct: 500 GLVESAIELFQSMPCK---PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITF 556

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LI+   + G +  A +++ +M   G +P++  Y  ++    +      A  L+  M+ 
Sbjct: 557 NILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMS- 615

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
             C P+ V++N+ +KGLC   R   A +++ +M + +C PN  T+
Sbjct: 616 --CKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 5/205 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++    + +QM   G +     + S+IN     GL E A+++F   +   
Sbjct: 457 LIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELF---QSMP 513

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP +  YN +L  L    R+     + SNM R    PN  T+NIL+ +LC+   VD A 
Sbjct: 514 CKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAI 573

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
           ++  +M   G  PD  +Y  +++   + G++++AR L   M        YN+ + GLC+ 
Sbjct: 574 EVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKPDAVSYNSALKGLCRA 633

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITY 203
            + +EA  ++ EM+     PN +T+
Sbjct: 634 ERWKEAEEVVAEMLRMKCPPNEVTF 658


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 266/556 (47%), Gaps = 5/556 (0%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+  G    EG F SVI +  + G   +AL++   +   G    + +   ++    
Sbjct: 97  LLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYC 156

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        + + +   G+ PN  TY++L+   CKN  ++ A++   EM  KG      
Sbjct: 157 MQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVY 216

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG-SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           S  +I+    K    + A  +   A+  G + V  +N L++ LCKE K+ EA  L  E++
Sbjct: 217 SLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVI 276

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            +GI PNV++Y+ II   C   N+  +  +  +M   G  PN  +FT L+ GY   G   
Sbjct: 277 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 336

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A  +++RM     LP       +I GLC  G   E   +  +       P    Y+ +I
Sbjct: 337 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 396

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DGF K GN+  AS ++  M   G +P+ V YT ++   C+ N    A  L+  M  +   
Sbjct: 397 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 456

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            +   + T I G C    +  A +LL++++     PN   YN ++ G   +N V+EA +L
Sbjct: 457 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 516

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++   GI  ++ TY +++ G+ ++G ++ A  +  +ML +G   D     ++I   C 
Sbjct: 517 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 576

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G+  NA ++L+ + G     P ++ Y +L+ G    G +QEAF    +ML+ G+ P+  
Sbjct: 577 KGQFENARKILEDMNGKNMI-PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNI 635

Query: 553 TWNVLVRSLFSNLGHL 568
           T+++LV   F   G+ 
Sbjct: 636 TYDILVNGKFKGDGNF 651



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 242/499 (48%), Gaps = 7/499 (1%)

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L A L E         +   K  G+E +   Y+I +  LC       A  LL EM   G
Sbjct: 46  MLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAG 105

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
             P   ++T+++++  K G V EA  L            ++V  +L+ G C +  +  A 
Sbjct: 106 WIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSAL 165

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+ E+ + G+ PN +TYS +I   C  GN+E +     +M  +G   +++S  S+L+GY
Sbjct: 166 VLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGY 225

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           L       A  ++N  +  G L NV  ++TL+  LC  G M+EA ++  ++      PNV
Sbjct: 226 LKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 284

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            +Y+ +I G  +  N+  A +++  M+ NG +PN V +T ++    +      A S+  +
Sbjct: 285 VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 344

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M   N  P   T    IKGLC  GR      L ++      +P    YN ++DG ++   
Sbjct: 345 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +  A  +  E+ + GI  + VTY +++ G C+   +  A +LL  M  +G K+D   +  
Sbjct: 405 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 464

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  +CK+  + +A +LL+ +RG G  +P+   Y S++ G  N   ++EA    +KM+NE
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAG-LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 523

Query: 546 GICPNFATWNVLVRSLFSN 564
           GI  +  T+  L+  L  +
Sbjct: 524 GIPCDLKTYTSLIDGLLKS 542



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 5/346 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K  I+    + ++M   G + +   F  +++ Y + G  E A  +F+R+++  + PT  
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 355

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
               I+  L    R      +++     G  P    YN ++    K   ++ A  +  EM
Sbjct: 356 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 415

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKI 181
              G  P  V+YT+++   CK   ++ A +L     R G    +  Y  LI+G CK   +
Sbjct: 416 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 475

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  LL E+   G+ PN   Y+++I+   ++ NVE ++ +  +M   G   ++ ++TSL
Sbjct: 476 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 535

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G L  GR   ASD+   M+ +G LP+  A++ LI+GLC+ G  + A  +   M   + 
Sbjct: 536 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNM 595

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            P+V  Y+ LI G  K GNL  A ++ + M+  G  P+ + Y  +V
Sbjct: 596 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 6/321 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K +I+    +  +MK   +  ++     +I    + G + +   +F +    G  PT  
Sbjct: 331 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 390

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN I+D  + E   ++ + +Y  M   G+ P+  TY  L+   CK N +D A KLL +M
Sbjct: 391 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 450

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKI 181
             KG   D  +Y T++   CK   ++ A EL     G+G+S    +YN++I G    + +
Sbjct: 451 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 510

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           EEA  L  +MV+ GI  ++ TY+++I  L   G +  +  I  +M  +G  P+  + T L
Sbjct: 511 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 570

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    G+   A  +   M  +  +P+V+ Y+TLI G    G++ EA  +  +M +   
Sbjct: 571 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 630

Query: 302 PPNVTTYSALIDG-FAKAGNL 321
            P+  TY  L++G F   GN 
Sbjct: 631 VPDNITYDILVNGKFKGDGNF 651



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 30/208 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ ++     LL +++  G+S +  ++ S+I  ++ +   E+A+ ++ ++   G
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 524

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   +K Y  ++D LL   R    + I++ M   G+ P+   + +L+  LC   + + A 
Sbjct: 525 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 584

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K+L +M  K   P  + Y T                              LI G  KE  
Sbjct: 585 KILEDMNGKNMIPSVLIYNT------------------------------LIAGHFKEGN 614

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           ++EAF L  EM+DRG+ P+ ITY  +++
Sbjct: 615 LQEAFRLHDEMLDRGLVPDNITYDILVN 642


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 239/512 (46%), Gaps = 25/512 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M  +G       +  VI         E+A ++F  ++  G+ P V  Y  +LD   
Sbjct: 109 VIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFC 168

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M++DG  PNV TY  L+ A  K  ++  A ++   M + GC P+ V
Sbjct: 169 KVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIV 228

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG----------------------VSVYNALING 174
           +YT ++   CK G+ E+A ++  R  +                       V  Y AL++G
Sbjct: 229 TYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDG 288

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK HK++EA  LL  M   G +PN I Y  +I   C VG ++ +  +  +M   GC+PN
Sbjct: 289 LCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPN 348

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++++SL+       R   A  +  +M+     PNVV Y+ ++ GLC  G  DEA  +  
Sbjct: 349 VYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLML 408

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            MEE  C PNV TY+A+IDGF KAG +    ++   M S GC+PN + Y  ++   C   
Sbjct: 409 MMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAG 468

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +   AH L+E+M     P +   +   I+G         ++ LL ++ +   +P +  Y 
Sbjct: 469 LLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYK 526

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+D  ++  R++ A EL  E+          TY +++  +  A  V +AF+L   M   
Sbjct: 527 LLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRR 585

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           G   +      +I    + GK   A+QL D I
Sbjct: 586 GFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 257/540 (47%), Gaps = 38/540 (7%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV--- 116
           G  P+  I+N ++ A      +     +   M   G +P    YNIL+  +C    +   
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 117 ------DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGV 165
                 + AY  ++EMG      + V+       +C +G+ E+A    RE+  + F    
Sbjct: 66  EVIGLAERAYNEMLEMG---VVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDS 122

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           S Y+ +I  LC   K+E+AF L  EM   GI P+V TY+T++   C VG +E +     +
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDE 182

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   GC PN+ ++T+L+  YL   +   A++++  M+  G +PN+V Y+ LI G C  G 
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 286 MDEAVSVSYQMEENSC-----------------PPNVTTYSALIDGFAKAGNLLGASQIW 328
            ++A  +  +M+ +                    PNV TY AL+DG  KA  +  A  + 
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M   GC PN + Y  ++   C+     +A  +  KM    C PN  T+++ I  L   
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKD 362

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            R+D A+K+L +M +  C PN+  Y E++DGL +V +  EA+ L+  +E+ G   N+VTY
Sbjct: 363 KRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             ++ G  +AG V    +LL  M  +G   + IT+ ++I   C  G +++A +LL+ ++ 
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK- 481

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
              W   I  Y  ++ G   S     +   L ++  +G  P    + +L+ + F   G L
Sbjct: 482 QTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELSEDGSVPILPVYKLLIDN-FIKAGRL 538



 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 241/480 (50%), Gaps = 29/480 (6%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK--- 147
           M  +G  P+   +N L+ A C++     AYKLL +M   G  P  V Y  ++  IC    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 148 ------LGQVEEARELAMRFGSGVSVYNA--LINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                 +G  E A    +  G  ++  N       LC   K E+A+ ++ EM+ +G  P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TYS +I  LC+   VE +  +  +M   G  P+++++T+LL  +   G   +A + ++
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M ++G  PNVV Y+ LIH       +  A  +   M  N C PN+ TY+ALIDG  KAG
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 320 NLLGASQIWNRMISNGCS-----------------PNVVAYTCMVKVLCQNNMFHQAHSL 362
               A QI+ RM ++                    PNVV Y  +V  LC+ +   +A  L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +E M+ E C PN + ++  I G C  G++D A ++  +M  + C PN+ TY+ L+D L +
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFK 361

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R+  A +++T++ +     N+V Y  ++ G+C+ G   EA++L+  M  +G   + +T
Sbjct: 362 DKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVT 421

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  +I  + K G+V+  ++LL  +   G   P+ I+Y  L+   C +G + +A   L++M
Sbjct: 422 YTAMIDGFGKAGRVDRCLELLQLMTSKG-CAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 206/425 (48%), Gaps = 34/425 (8%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD---------VGNVE 217
           ++N+L++  C+      A+ LL +MV  G  P  + Y+ +I  +C          +G  E
Sbjct: 13  IFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAE 72

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +   + +M V     N+ +FT  L      G+  +A ++   M+ +GF+P+   YS +I
Sbjct: 73  RAYNEMLEMGVVLNKVNVCNFTRCL---CCIGKFEKAYNVIREMMSKGFIPDSSTYSKVI 129

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC+   +++A  +  +M+ N   P+V TY+ L+D F K G +  A   ++ M  +GC+
Sbjct: 130 GYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV YT ++    +     +A+ + E M    C PN VT+   I G C  G  + A ++
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQI 249

Query: 398 LDQMKQYEC-LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
             +MK  +  +P++  Y  ++D  L+                   + N+VTY  ++ G+C
Sbjct: 250 YARMKNDKVDIPDVDIYFRIVDSELK-------------------EPNVVTYGALVDGLC 290

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +A  V EA  LL  M +EG + + I ++ +I  +CK GK++ A ++  ++ G G  +P++
Sbjct: 291 KAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG-CSPNV 349

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +Y+SL+  +     +  A   L KML     PN   +  +V  L   +G     Y L  
Sbjct: 350 YTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGL-CKVGKTDEAYRLML 408

Query: 577 IMANK 581
           +M  K
Sbjct: 409 MMEEK 413



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/365 (22%), Positives = 167/365 (45%), Gaps = 39/365 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   + LL+ M +EG   ++ ++ ++I+ + +VG  ++A ++F ++   G
Sbjct: 285 LVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHG 344

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ ++D L  + R  +   + + M  +   PNV  Y  ++  LCK  + D AY
Sbjct: 345 CSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAY 404

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L++ M  KGC P+ V+YT                              A+I+G  K  +
Sbjct: 405 RLMLMMEEKGCYPNVVTYT------------------------------AMIDGFGKAGR 434

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++    LL  M  +G  PN ITY  +I+  C  G ++ +  +L +M       +I  +  
Sbjct: 435 VDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRK 494

Query: 241 LLKGYLLGGRTHE---ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++G+     +HE   +  L   +  +G +P +  Y  LI      G ++ A+ +  ++ 
Sbjct: 495 VIEGF-----SHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELS 549

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             S      TY +LI+    A  +  A ++++ M   G  P +    C++K L +   + 
Sbjct: 550 SFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWE 608

Query: 358 QAHSL 362
           +A  L
Sbjct: 609 EALQL 613



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 123/258 (47%), Gaps = 42/258 (16%)

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC-- 388
           MI+ GC P+ + +  +V   C++  +  A+ L++KM      P  V +N  I G+C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 389 ---------------------------------------GRVDWAMKLLDQMKQYECLPN 409
                                                  G+ + A  ++ +M     +P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
            +TY++++  L   ++V++AF+L  E+++ GI  ++ TY T+L   C+ G++ +A     
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M  +G   + +T+  +I+AY K  K++ A ++ + +   G   P+I++YT+L+ G C +
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG-CVPNIVTYTALIDGHCKA 240

Query: 530 GGMQEAFIYLQKMLNEGI 547
           G  ++A     +M N+ +
Sbjct: 241 GETEKACQIYARMKNDKV 258


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 249/484 (51%), Gaps = 9/484 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + IS++N  R       A+ ++ ++    ++P     N I++      +  +     S +
Sbjct: 64  ILISLVNVKR----YPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKI 119

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            + G +PN  T N L+K LC   +V  A +   ++  +G     +SY  +++ +CK+G+ 
Sbjct: 120 LKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGET 179

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A  L  R         V +Y+ +I+ LCK+  ++EA+ L  EMV +GI P+V+TYS +
Sbjct: 180 RAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSIL 239

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +S  C VG +  ++ +L +M +   NP+I+++T L+      G+  EA ++   M++   
Sbjct: 240 VSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACV 299

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             +VV YSTL+ G C    ++ A  V Y M +    P+V  YS +I+G  K   +  A  
Sbjct: 300 NLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALN 359

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  +      P+ V YT ++  LC++        L ++M     PP+ +T+N  I  LC
Sbjct: 360 LFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALC 419

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G +D A+ L ++MK     PN+ T+  LLDGL +V R+K A E   ++   G  LN+ 
Sbjct: 420 KNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVR 479

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY  +++G+C+ G++ EA  L  +M   G   DA+TF I+I A+  + + + A +L+  +
Sbjct: 480 TYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539

Query: 507 RGGG 510
              G
Sbjct: 540 IARG 543



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 260/508 (51%), Gaps = 8/508 (1%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+ A+  F  +      P    +N IL +L+   R+     +Y  M+   +EP+ FT NI
Sbjct: 39  ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNI 98

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMR 160
           ++   C   +V  A+  + ++   G  P+ ++  T++  +C  G+V+EA     + LA  
Sbjct: 99  IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158

Query: 161 FG-SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           F  SG+S Y  LING+CK  +   A  LL  +    I PNV+ YS II  LC    V+ +
Sbjct: 159 FRLSGIS-YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEA 217

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +  +M  +G +P++ +++ L+ G+ + G+ + A DL N M+ E   P++  Y+ L+  
Sbjct: 218 YDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDA 277

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  G + EA +V   M +     +V  YS L+DG+     +  A +++  M   G +P+
Sbjct: 278 LCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  Y+ M+  LC+     +A +L E++  +N  P+TVT+ + I  LC  GR+ +   L D
Sbjct: 338 VHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFD 397

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M      P++ TYN L+D L +   +  A  L  +++   I+ N+ T+  +L G+C+ G
Sbjct: 398 EMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVG 457

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A +    +L +G  L+  T+ ++I   CK+G ++ A+ L  R+   G  + D +++
Sbjct: 458 RLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCIS-DAVTF 516

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             ++    +     +A   +++M+  G+
Sbjct: 517 EIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 235/501 (46%), Gaps = 37/501 (7%)

Query: 63  PTVKIYNHILDALL--AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           P +  ++H L  L   A++  S  N ++         P+ F +N +L +L    R   A 
Sbjct: 23  PNLCFHSHSLPPLTHNADDAVSQFNHMFHVHP----TPHTFHFNKILISLVNVKRYPTAI 78

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +M      PD  +   I++  C  GQV  A        SGVS              
Sbjct: 79  SLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLA-------FSGVS-------------- 117

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                    +++  G  PN IT +T++  LC  G V+ +L    ++  +G   +  S+  
Sbjct: 118 ---------KILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGI 168

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G    G T  A  L  R+ R    PNVV YS +I  LC +  +DEA  +  +M    
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKG 228

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+V TYS L+ GF   G L  A  + N M+    +P++  YT +V  LC+     +A 
Sbjct: 229 ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAE 288

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +++  M       + V ++T + G C    V+ A ++   M Q    P++  Y+ +++GL
Sbjct: 289 NVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGL 348

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            ++ RV EA  L  EI +  +  + VTY +++  +C++G +   + L  +ML  G   D 
Sbjct: 349 CKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDV 408

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+N +I A CK G ++ AI L ++++      P++ ++T LL G+C  G ++ A  + Q
Sbjct: 409 ITYNNLIDALCKNGHLDRAIALFNKMKDQA-IRPNVYTFTILLDGLCKVGRLKNALEFFQ 467

Query: 541 KMLNEGICPNFATWNVLVRSL 561
            +L +G C N  T+ V++  L
Sbjct: 468 DLLTKGYCLNVRTYTVMINGL 488



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 203/405 (50%), Gaps = 9/405 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDAL--LAENRFSMINPIYSNMKRDGMEPNVF 101
           G  ++AL+   ++   G + +   Y  +++ +  + E R ++   +   ++R  + PNV 
Sbjct: 142 GKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAI--RLLRRIERWSIRPNVV 199

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            Y++++  LCK+  VD AY L  EM  KG +PD V+Y+ +VS  C +GQ+  A +L    
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   +  Y  L++ LCKE K++EA  +L  MV   ++ +V+ YST++   C V  V
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +   M   G  P++H ++ ++ G     R  EA +L+  + ++  +P+ V Y++L
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSL 379

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC +G +     +  +M +   PP+V TY+ LID   K G+L  A  ++N+M     
Sbjct: 380 IDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV  +T ++  LC+      A    + +  +    N  T+   I GLC  G +D A+ 
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA 499

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           L  +M+   C+ +  T+  ++      +   +A +LV E+   G+
Sbjct: 500 LQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 200/403 (49%), Gaps = 2/403 (0%)

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
           H  ++A      M      P+   ++ I+ SL +V    T++ +  QM +    P+  + 
Sbjct: 37  HNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTL 96

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++  +   G+   A    +++++ G+ PN +  +TL+ GLC  G + EA+    ++  
Sbjct: 97  NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
                +  +Y  LI+G  K G    A ++  R+      PNVV Y+ ++  LC++ +  +
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDE 216

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A+ L  +M  +   P+ VT++  + G C  G+++ A+ LL++M      P+I TY  L+D
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L +  +VKEA  ++  + K  + L++V Y+T++ G C    V  A ++   M   G   
Sbjct: 277 ALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTP 336

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D   ++I+I   CK  +V+ A+ L + I       PD ++YTSL+  +C SG +   +  
Sbjct: 337 DVHCYSIMINGLCKIKRVDEALNLFEEIHQKN-MVPDTVTYTSLIDCLCKSGRISYVWDL 395

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             +ML+ G  P+  T+N L+ +L  N GHL     L + M ++
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKN-GHLDRAIALFNKMKDQ 437



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 172/340 (50%), Gaps = 5/340 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +   +D    L  +M  +G+S     +  +++ +  VG   +A+ +   +    
Sbjct: 204 IIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLEN 263

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  Y  ++DAL  E +      + + M +  +  +V  Y+ L+   C  N V+ A 
Sbjct: 264 INPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAK 323

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           ++   M   G  PD   Y+ +++ +CK+ +V+EA  L               Y +LI+ L
Sbjct: 324 RVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCL 383

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +I   + L  EM+DRG  P+VITY+ +I +LC  G+++ ++ +  +M  +   PN+
Sbjct: 384 CKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNV 443

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++FT LL G    GR   A + +  ++ +G+  NV  Y+ +I+GLC  G +DEA+++  +
Sbjct: 444 YTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSR 503

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ME+N C  +  T+  +I  F        A ++   MI+ G
Sbjct: 504 MEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/389 (23%), Positives = 175/389 (44%), Gaps = 42/389 (10%)

Query: 233 PNIHSFTSLL--KGYLLGGRTHEASDL---WNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           PN   F   L    + L   TH A D    +N M      P+   ++ ++  L +     
Sbjct: 16  PNFPPFLPNLCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYP 75

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+S+  QME +   P+  T + +I+ F   G ++ A    ++++  G  PN +    ++
Sbjct: 76  TAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLM 135

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           K LC      +A    +K+  +    + +++   I G+C  G    A++LL +++++   
Sbjct: 136 KGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIR 195

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+  Y+ ++D L +   V EA++L TE+   GI  ++VTY+ ++ G C  G +  A  L
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDL 255

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQG--------------------------------- 494
           L +M++E    D  T+ I++ A CK+G                                 
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315

Query: 495 --KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
             +VNNA ++   +   G   PD+  Y+ ++ G+C    + EA    +++  + + P+  
Sbjct: 316 VNEVNNAKRVFYTMTQMG-VTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTV 374

Query: 553 TWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           T+  L+  L  + G +  V+ L D M ++
Sbjct: 375 TYTSLIDCLCKS-GRISYVWDLFDEMLDR 402



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 136/274 (49%), Gaps = 9/274 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++ ++   + +L  M    V+    V+ ++++ Y  V     A ++FY + + G
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG 333

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ +++ L    R      ++  + +  M P+  TY  L+  LCK+ R+   +
Sbjct: 334 VTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVW 393

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALIN 173
            L  EM ++G  PD ++Y  ++ ++CK G ++ A       ++ A+R    V  +  L++
Sbjct: 394 DLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIR--PNVYTFTILLD 451

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  +++ A     +++ +G   NV TY+ +I+ LC  G ++ +L +  +M   GC  
Sbjct: 452 GLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCIS 511

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +  +F  +++ +       +A  L   MI  G L
Sbjct: 512 DAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 264/559 (47%), Gaps = 7/559 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYN 69
            D V   LQ M + G + +     +++ +Y   G+  +A  M  R+RE +G  P V   N
Sbjct: 114 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCN 173

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L+ + R+     +Y  M  +    + ++  +L++ LC   RV+   KL+      
Sbjct: 174 RLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGA 233

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           GC P  V Y  ++   C+ G +     L     A  F   +  Y +LIN L K+  +E+ 
Sbjct: 234 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKI 293

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  EM  RG+ PNV  Y+++I +LC   +   ++ IL QMF  GC+P+I +F +L+ G
Sbjct: 294 GSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITG 353

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   +A       IR    PN ++Y+ LIHG C  G +  A  +  +M      P+
Sbjct: 354 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPD 413

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V T+ ALI G   AG +  A  +  +M      P+V  Y  ++  LC+ +M   A +++E
Sbjct: 414 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILE 473

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +N  P+   + T I G      +  A K+ + M+     P+I + N ++ G  +  
Sbjct: 474 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFG 533

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            + EA   ++ + K G   +  TY T++ G  + G +  A + L  M+    K + +T++
Sbjct: 534 MMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 593

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  YCK G  ++A  L   ++     +P++++YT L+  +     +  A +Y + ML 
Sbjct: 594 SLINGYCKTGDTDSAEGLFANMQAEA-LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 652

Query: 545 EGICPNFATWNVLVRSLFS 563
               PN  T + LV  L S
Sbjct: 653 NHCSPNDVTLHYLVNGLTS 671



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 237/503 (47%), Gaps = 22/503 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G   +   + S+IN   + G  E+   +F  +R+ GL P V+IYN ++DAL 
Sbjct: 261 LLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALC 320

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                +    I   M   G +P++ T+N L+  LC    V  A   L E   +   P+ +
Sbjct: 321 KCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQL 380

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           SYT ++   C  G++  A +L M   G G    V  + ALI+GL    K+ EA  +  +M
Sbjct: 381 SYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 440

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +R + P+V  Y+ +IS LC    +  +  IL +M  +   P+   + +L+ G++     
Sbjct: 441 TERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 500

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++  M  +G  P++V+ + +I G C  G M EA+     M +  C P+  TY+ +
Sbjct: 501 GDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 560

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G+AK GNL GA +    MI   C PNVV Y+ ++   C+      A  L   M  E  
Sbjct: 561 ISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEAL 620

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR-----VNRV 426
            PN VT+   I  L    +V  A    + M    C PN  T + L++GL       +N +
Sbjct: 621 SPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSI 680

Query: 427 ---------KEAFELVTE--IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
                    K+A  +V +  +   G   N   YN I+  +CR  M+ EA     +M  +G
Sbjct: 681 CCNTSEVHGKDALLVVFKKLVFDIGDPRN-SAYNAIIFSLCRHNMLREALDFKNRMAKKG 739

Query: 476 TKLDAITFNIIIYAYCKQGKVNN 498
              + ITF  ++Y +C  GK  N
Sbjct: 740 YVPNPITFLSLLYGFCSVGKSMN 762



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 242/530 (45%), Gaps = 19/530 (3%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E+ LK+       G  P V  YN ++D             +   M+  G  P + TY
Sbjct: 218 GRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTY 277

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFG 162
             L+  L K   ++    L +EM  +G +P+   Y +++ ++CK     +A   L   F 
Sbjct: 278 GSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFA 337

Query: 163 SG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           SG    +  +N LI GLC E  + +A   L E + R ++PN ++Y+ +I   C  G +  
Sbjct: 338 SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMA 397

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  +L +M  RG  P++ +F +L+ G ++ G+  EA  +  +M      P+V  Y+ LI 
Sbjct: 398 ASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 457

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC    +  A ++  +M E +  P+   Y+ LIDGF ++ NL  A +I+  M   G  P
Sbjct: 458 GLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 517

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++V+   M+K  CQ  M  +A   +  M    C P+  T+ T I G    G ++ A++ L
Sbjct: 518 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 577

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M + +C PN+ TY+ L++G  +      A  L   ++   +  N+VTY  ++  + + 
Sbjct: 578 CDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKK 637

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIII--YAYCKQGKVNNAIQLLDRIRGGGEW---- 512
             V+ A      ML+     + +T + ++     C    +N+       + G        
Sbjct: 638 DKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVF 697

Query: 513 --------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
                   +P   +Y ++++ +C    ++EA  +  +M  +G  PN  T+
Sbjct: 698 KKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 747



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 208/496 (41%), Gaps = 91/496 (18%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG+K +++ +  L  +M+  G+S +  ++ SVI++  +   A QA+ +  ++   G
Sbjct: 280 LINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASG 339

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +N ++  L  E              R  + PN  +Y  L+   C    +  A 
Sbjct: 340 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAAS 399

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RE--LAMRFGSGVSVYNALINGL 175
            LL+EM  +G  PD V++  ++  +   G+V EA   RE     +    V++YN LI+GL
Sbjct: 400 DLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 459

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL------------------------- 210
           CK+H +  A  +L EM+++ + P+   Y+T+I                            
Sbjct: 460 CKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDI 519

Query: 211 ----------CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
                     C  G +  ++  +  M   GC P+  ++T+++ GY   G  + A      
Sbjct: 520 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 579

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           MI+    PNVV YS+LI+G C  G  D A  +   M+  +  PNV TY+ LI    K   
Sbjct: 580 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 639

Query: 321 LLGASQIWNRMISNGCSPNVV--------------------------------------- 341
           +L A   +  M+ N CSPN V                                       
Sbjct: 640 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 699

Query: 342 -----------AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
                      AY  ++  LC++NM  +A     +MA +   PN +TF + + G C  G+
Sbjct: 700 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759

Query: 391 -VDWAMKLLDQMKQYE 405
            ++W   L ++ +Q E
Sbjct: 760 SMNWRTILPNEFQQEE 775



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 177/414 (42%), Gaps = 39/414 (9%)

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           DP  + +ST++  L      +     L  M + G  P      +L+  Y   G   +A+D
Sbjct: 95  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATD 154

Query: 257 LWNRMIRE-GFLPNVVA---------------------------------YST--LIHGL 280
           +  R+  + G LP V                                   YST  L+ GL
Sbjct: 155 MCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGL 214

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G ++E + +        C P+V  Y+ LIDG+ + G++     +   M + G  P +
Sbjct: 215 CLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTL 274

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++  L +     +  SL  +M      PN   +N+ I  LC C     AM +L Q
Sbjct: 275 VTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQ 334

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M    C P+I T+N L+ GL     V++A   + E  +  +  N ++Y  ++HG C  G 
Sbjct: 335 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 394

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           ++ A  LL +M+  G   D +TF  +I+     GKV+ A+ + +++     + PD+  Y 
Sbjct: 395 LMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF-PDVNIYN 453

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF--SNLGHLGPVY 572
            L+ G+C    +  A   L++ML + + P+   +  L+       NLG    ++
Sbjct: 454 VLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 239/471 (50%), Gaps = 12/471 (2%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+  G+ PN  T NIL+   C+  RVD  + +L +    G  P  V++TT+++ + K+G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 151 VEEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
             +A EL   F   V+         Y  +INGLCK  +   A  L  +M + G   NV+T
Sbjct: 61  FAQAVEL---FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVT 117

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           YST+I SLC    V  +L I   M  +  +P I ++TSL++G     R  EAS L N M 
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
               +PNVV ++ L+   C  G +  A  V   M E    P+V TY++L+ G++    ++
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A ++++ MI+ GC P+V +Y+ ++   C+     +A  L  +M  +   PN V++NT I
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC  GR+  A  L   M     LPN+ TY  LLDG  +   + +AF L   ++   ++
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            N+V YN +++ +C++G + +A +L  ++ + G + +   +  II   CK+G ++ A++ 
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
              +   G   PD  SY  ++ G         A   + +M + G   +  T
Sbjct: 418 FRNMEDDG-CPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 227/470 (48%), Gaps = 11/470 (2%)

Query: 21  MKVEGVS---CSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           M++ G+S   C+  + I+     +RV L    L    ++   GL+PT+  +  +++ L  
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKL---GLQPTIVTFTTLINGLGK 57

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
             +F+    ++ +M   G +P+ +TY  ++  LCK      A  L  +M   GC  + V+
Sbjct: 58  VGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVT 117

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           Y+T++ S+CK  +V EA ++     A      +  Y +LI GLC   + +EA  LL EM 
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
              I PNV+T++ ++ + C  G V  + G+L  M   G  P++ ++ SL+ GY +     
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA  L++ MI +G  P+V +YS LI+G C    +DEA  +  +M      PN  +Y+ LI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G  + G L  A  ++  M +NG  PN+  Y  ++   C+     +A  L   M      
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN V +N  +  +C  G +  A +L  ++      PN+  Y  +++GL +   + EA E 
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              +E  G   +  +YN I+ G  +      A  L+G+M   G   DA T
Sbjct: 418 FRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 195/408 (47%), Gaps = 5/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG+  +      L   M   G    +  + ++IN   ++G    A  +F ++ E G
Sbjct: 51  LINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG 110

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +  V  Y+ ++ +L    R +    I+S MK   + P +FTY  L++ LC  +R   A 
Sbjct: 111 CQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEAS 170

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            LL EM +    P+ V++  +V + CK G+V  A  +      M     V  YN+L+ G 
Sbjct: 171 ALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGY 230

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               ++ EA  L   M+ +G  P+V +YS +I+  C    ++ +  +  +M  +G  PN 
Sbjct: 231 SMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNN 290

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ G    GR  EA DL+  M   G LPN+  Y+ L+ G C  G + +A  +   
Sbjct: 291 VSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRA 350

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+     PN+  Y+ L++   K+GNL  A ++++ +   G  PNV  YT ++  LC+  +
Sbjct: 351 MQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGL 410

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             +A      M  + CPP+  ++N  I+G         A+ L+ +M+ 
Sbjct: 411 LDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRD 458



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 2/304 (0%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  PN    + LI+  C    +D   SV  +  +    P + T++ LI+G  K G    A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++++ M++ GC P+   YT ++  LC+      A  L +KM    C  N VT++T I  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   RV+ A+ +   MK  +  P I TY  L+ GL   +R KEA  L+ E+    I  N
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +VT+N ++   C+ G V+ A  +L  M   G + D +T+N ++Y Y    +V  A +L D
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G   PD+ SY+ L+ G C +  + EA     +M+++G  PN  ++N L+  L   
Sbjct: 245 VMITKG-CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL-CQ 302

Query: 565 LGHL 568
           LG L
Sbjct: 303 LGRL 306



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 1/196 (0%)

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      PNT T N  I   C   RVD    +L +  +    P I T+  L++GL +V +
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             +A EL  ++   G Q +  TY TI++G+C+ G    A  L  KM   G +L+ +T++ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I++ CK  +VN A+ +   ++   + +P I +YTSL+ G+CN    +EA   L +M + 
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179

Query: 546 GICPNFATWNVLVRSL 561
            I PN  T+NVLV + 
Sbjct: 180 NIMPNVVTFNVLVDTF 195



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 9/228 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFIS--VINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           E+   + L   M  +G  C   VF    +IN Y +    ++A ++F  +   G  P    
Sbjct: 235 EVVEARKLFDVMITKG--CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVS 292

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++  L    R      ++ NM  +G  PN++TY ILL   CK   +  A++L   M 
Sbjct: 293 YNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQ 352

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
           +    P+ V Y  +V+++CK G +++AREL      +     V +Y  +INGLCKE  ++
Sbjct: 353 STYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLD 412

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           EA      M D G  P+  +Y+ II       +   ++ ++G+M  RG
Sbjct: 413 EALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 164/612 (26%), Positives = 280/612 (45%), Gaps = 71/612 (11%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +  K++ V C++     +I+      L  +A+   +R+R     P V  Y  +L   L +
Sbjct: 265 EDFKLDTVLCTQ-----MISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKK 319

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I + M  +G  P+   +N L+   C       AYKL   M   GC P  V Y
Sbjct: 320 KQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVY 379

Query: 139 TTIVSSI-----------------------------------------CKLGQVEEAREL 157
              + SI                                         C +G+ E+A ++
Sbjct: 380 NIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQI 439

Query: 158 A---MR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               MR  F    S Y  +I  LC+  ++++AF L  EM   G++P+V TY+ +I S C 
Sbjct: 440 VKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCK 499

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +E +     +M   GC+PN+ ++T+LL  YL   + ++A+D+++RM+ +   PN + 
Sbjct: 500 AGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAIT 559

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQM----------------EENSCPPNVTTYSALIDGFA 316
           YS LI GLC  G + +A  V  ++                + ++  PNV TY AL++G  
Sbjct: 560 YSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLC 619

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA  +  A  + + M++ GC PN + Y  +V   C+      A  +  +M      P+  
Sbjct: 620 KAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVH 679

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+ + I  +   GR+D AMK+L QM +  C PN+ TY  ++DGL +    ++A  L++ +
Sbjct: 680 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLM 739

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           EK G   N+VTY  ++ G+ +AG V    +L  +M  +G   + +T+ I+I   C  G +
Sbjct: 740 EKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLL 799

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           ++A  LLD ++    W   +  Y + + G   S     +   L++M +    P    + +
Sbjct: 800 DDAHLLLDEMK-QTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGM 856

Query: 557 LVRSLFSNLGHL 568
           L+ S FS  G L
Sbjct: 857 LIDS-FSKAGRL 867



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 250/510 (49%), Gaps = 26/510 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++++M  +G       +  VI    +    ++A  +F  +++ G+ P V  Y  ++D+  
Sbjct: 439 IVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFC 498

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  M+  G  PNV TY  LL A  K+ ++  A  +   M    C P+A+
Sbjct: 499 KAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAI 558

Query: 137 SYTTIVSSICKLGQVEEARELAMRF---------------------GSGVSVYNALINGL 175
           +Y+ ++  +CK G++++A E+  +                         V  Y AL+NGL
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+ +A  LL  M+  G +PN I Y  ++   C VG ++++  +  +M   G  P++
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSV 678

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           H++TSL+      GR   A  + ++M+++   PNVV Y+ ++ GLC  G  ++A+++   
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSL 738

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME+  C PNV TY+ALIDG  KAG +    +++ +M + GC+PN V Y  ++   C   +
Sbjct: 739 MEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGL 798

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              AH L+++M   + P     + T ++G     R   ++ LL++M+ ++  P    Y  
Sbjct: 799 LDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGM 856

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT---YNTILHGVCRAGMVVEAFQLLGKML 472
           L+D   +  R++ A EL  E+ +    LN+ +   + +++  +C +  V EA  L  +M 
Sbjct: 857 LIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMR 916

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
             G   D   F  ++    ++ K N A+QL
Sbjct: 917 RRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/621 (27%), Positives = 278/621 (44%), Gaps = 70/621 (11%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K ++   + ++  M  EG + S  +F S++++Y        A K+F R+   G  P   
Sbjct: 318 KKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYV 377

Query: 67  IYNHILDAL-------------LAEN----------------------------RFSMIN 85
           +YN  + ++             LAE                             +F    
Sbjct: 378 VYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAF 437

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            I   M R G  P+  TY  ++  LC+  RVD A+ L  EM   G  PD  +YT ++ S 
Sbjct: 438 QIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSF 497

Query: 146 CKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CK G +E+A+       S      V  Y AL++   K  ++ +A  +   MV     PN 
Sbjct: 498 CKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNA 557

Query: 201 ITYSTIISSLCDVGNVE-----------TSLGILGQMFVRG-----CNPNIHSFTSLLKG 244
           ITYS +I  LC  G ++           TS  I    +  G      +PN+ ++ +L+ G
Sbjct: 558 ITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNG 617

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  +A DL + M+  G  PN + Y  L+ G C  G +D A  V  +M +    P+
Sbjct: 618 LCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPS 677

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY++LID   K G L  A ++ ++M+ + C+PNVV YT MV  LC+     +A +L+ 
Sbjct: 678 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLS 737

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  + C PN VT+   I GL   G+VD  ++L  QMK   C PN  TY  L++      
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            + +A  L+ E+++      +  Y T + G  +    + +  LL +M    T   A  + 
Sbjct: 798 LLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYG 855

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGE----WNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           ++I ++ K G++  A++L   +          + D+  +TSL+  +C S  ++EA     
Sbjct: 856 MLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDM--HTSLIQALCLSSQVEEAVALYS 913

Query: 541 KMLNEGICPNFATWNVLVRSL 561
           +M   GI P+ + +  LV+ L
Sbjct: 914 EMRRRGIVPDLSAFVCLVKGL 934



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 259/609 (42%), Gaps = 95/609 (15%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           GL  +AL+   R+++FG +P+   YN ++  L +  +  M   +   M   G   +  T 
Sbjct: 183 GLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTV 242

Query: 104 NILLKALCKNNRVDGAYKLL---------------------VEMGNKGCA---------- 132
               +ALCK  R   A  LL                       + N+  +          
Sbjct: 243 GSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSY 302

Query: 133 -PDAVSYTTIVSSICK---LGQVEEARELAMRFG--SGVSVYNALINGLCKEHKIEEAFW 186
            P+ V+Y T+++   K   LG  +    + M  G     S++N+L++  C       A+ 
Sbjct: 303 IPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYK 362

Query: 187 LLCEMVDRGIDPNVITYSTIISS------------------------------------- 209
           L   M   G  P  + Y+  I S                                     
Sbjct: 363 LFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTAN 422

Query: 210 ----LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
               LC VG  E +  I+ +M  +G  P+  ++T ++       R  +A  L+  M + G
Sbjct: 423 FARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVG 482

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+V  Y+ LI   C  G +++A S   +M    C PNV TY+AL+  + K+  L  A+
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAN 542

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA-----------FE----- 369
            I++RM+ + C PN + Y+ ++  LC+     +A  +  K+            FE     
Sbjct: 543 DIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTD 602

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              PN VT+   + GLC   +V  A  LLD M    C PN   Y+ L+DG  +V  +  A
Sbjct: 603 TISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSA 662

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            E+   + KCG   ++ TY +++  + + G +  A ++L +ML +    + +T+  ++  
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDG 722

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            CK G+   A+ LL  +   G  +P++++YT+L+ G+  +G +        +M  +G  P
Sbjct: 723 LCKTGETEKALNLLSLMEKKG-CSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAP 781

Query: 550 NFATWNVLV 558
           N+ T+ +L+
Sbjct: 782 NYVTYRILI 790



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 232/499 (46%), Gaps = 28/499 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    L Q+MK  GV+     +  +I+S+ + GL EQA   F  +R  G  P V  Y 
Sbjct: 467 RVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYT 526

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM--- 126
            +L A L   +    N I+  M  D   PN  TY+ L+  LCK   +  A ++  ++   
Sbjct: 527 ALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGT 586

Query: 127 -------------GNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS----V 167
                             +P+ V+Y  +V+ +CK  +V +A +L  AM   +G      V
Sbjct: 587 SDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAM-LAAGCEPNQIV 645

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y+AL++G CK  +I+ A  +   M   G  P+V TY+++I  +   G ++ ++ +L QM 
Sbjct: 646 YDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 705

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
              CNPN+ ++T+++ G    G T +A +L + M ++G  PNVV Y+ LI GL   G +D
Sbjct: 706 KDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVD 765

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
             + +  QM+   C PN  TY  LI+    AG L  A  + + M        +  Y   V
Sbjct: 766 AGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTV 825

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +   +   F  +  L+E+M   +  P    +   I      GR++ A++L  +M +    
Sbjct: 826 QGFSKR--FLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSS 883

Query: 408 PNITT---YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            N+ +   +  L+  L   ++V+EA  L +E+ + GI  ++  +  ++ G+       EA
Sbjct: 884 LNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEA 943

Query: 465 FQLLGKMLIEGTKLDAITF 483
            QL   +  EG   +   F
Sbjct: 944 LQLCYGICQEGVNWEGNKF 962



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 188/399 (47%), Gaps = 10/399 (2%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+   C +    EA   L  + D G  P+ +TY+ ++  L   G VE +  +  +M  
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G   +  +  S  +     GR  +A DL   + RE F  + V  + +I GL      +E
Sbjct: 233 SGFCMDRSTVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEASLFNE 289

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+S  ++M  NS  PNV TY  L+ GF K   L    +I N M++ GC+P+   +  +V 
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR------VDWAMKLLDQMK 402
             C    +  A+ L  +M    CPP  V +N FI  +CG         +D A K+ ++M 
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEML 409

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
              C+ N          L  V + ++AF++V E+ + G   +  TY  ++  +C+A  V 
Sbjct: 410 VASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVD 469

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +AF L  +M   G   D  T+ I+I ++CK G +  A    D +R  G  +P++++YT+L
Sbjct: 470 KAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAG-CSPNVVTYTAL 528

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L     S  + +A     +M+ +   PN  T++ L+  L
Sbjct: 529 LHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGL 567



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 242/597 (40%), Gaps = 66/597 (11%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
           ++ V ++V+ + R     E  ++ F +  R+ G K T   Y+ + + L  E+       +
Sbjct: 100 TDSVVVAVLGAVRS---PELCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERL 156

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
              +  D  +      N+L++  C       A + L  + + G  P AV+Y  +V  +  
Sbjct: 157 LREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLAS 216

Query: 148 LGQVEEA----REL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID----- 197
            GQVE A    +E+ A  F    S   +    LCKE +  +A  LL E  D  +D     
Sbjct: 217 AGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLL-EREDFKLDTVLCT 275

Query: 198 ----------------------------PNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
                                       PNV+TY T+++       +     I+  M   
Sbjct: 276 QMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTE 335

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS---- 285
           GCNP+   F SL+  Y        A  L+NRM   G  P  V Y+  I  +C        
Sbjct: 336 GCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNP 395

Query: 286 --MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +D A  V  +M   SC  N    +         G    A QI   M+  G  P+   Y
Sbjct: 396 ELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTY 455

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T ++  LCQ     +A  L ++M      P+  T+   I   C  G ++ A    D+M+ 
Sbjct: 456 TKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRS 515

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
             C PN+ TY  LL   L+  ++ +A ++   +       N +TY+ ++ G+C+AG + +
Sbjct: 516 AGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQK 575

Query: 464 AFQLLGKML-----------IEGTKLDAITFNIIIY-----AYCKQGKVNNAIQLLDRIR 507
           A ++  K++            EG   D I+ N++ Y       CK  KV++A  LLD + 
Sbjct: 576 ACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAML 635

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G   P+ I Y +L+ G C  G +  A     +M   G  P+  T+  L+  +F +
Sbjct: 636 AAG-CEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKD 691


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 266/556 (47%), Gaps = 5/556 (0%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+  G    EG F SVI +  + G   +AL++   +   G    + +   ++    
Sbjct: 215 LLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYC 274

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        + + +   G+ PN  TY++L+   CKN  ++ A++   EM  KG      
Sbjct: 275 MQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVY 334

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG-SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           S  +I+    K    + A  +   A+  G + V  +N L++ LCKE K+ EA  L  E++
Sbjct: 335 SLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVI 394

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            +GI PNV++Y+ II   C   N+  +  +  +M   G  PN  +FT L+ GY   G   
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A  +++RM     LP       +I GLC  G   E   +  +       P    Y+ +I
Sbjct: 455 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 514

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DGF K GN+  AS ++  M   G +P+ V YT ++   C+ N    A  L+  M  +   
Sbjct: 515 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 574

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            +   + T I G C    +  A +LL++++     PN   YN ++ G   +N V+EA +L
Sbjct: 575 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 634

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++   GI  ++ TY +++ G+ ++G ++ A  +  +ML +G   D     ++I   C 
Sbjct: 635 YKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCN 694

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +G+  NA ++L+ + G     P ++ Y +L+ G    G +QEAF    +ML+ G+ P+  
Sbjct: 695 KGQFENARKILEDMNGKNMI-PSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNI 753

Query: 553 TWNVLVRSLFSNLGHL 568
           T+++LV   F   G+ 
Sbjct: 754 TYDILVNGKFKGDGNF 769



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 206/467 (44%), Gaps = 70/467 (14%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            Y+  ++ LC +     A  LL EM   G  P   T++++I++    GNV  +L +   M
Sbjct: 195 AYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDM 254

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G + N+   TSL+KGY + G    A  L N +   G +PN V YS LI G C NG++
Sbjct: 255 VNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNI 314

Query: 287 DEAVSVSYQMEEN----------------------------------SCPPNVTTYSALI 312
           ++A     +M+                                    S   NV T++ L+
Sbjct: 315 EKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLL 374

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
               K G +  A  +W+ +I+ G SPNVV+Y  ++   C+ +  + A  + ++M      
Sbjct: 375 SWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFT 434

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT-------------------- 412
           PN VTF   + G    G ++ A  +  +MK    LP  TT                    
Sbjct: 435 PNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDL 494

Query: 413 ---------------YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
                          YN ++DG ++   +  A  +  E+ + GI  + VTY +++ G C+
Sbjct: 495 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 554

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
              +  A +LL  M  +G K+D   +  +I  +CK+  + +A +LL+ +RG G  +P+  
Sbjct: 555 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG-LSPNRF 613

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            Y S++ G  N   ++EA    +KM+NEGI  +  T+  L+  L  +
Sbjct: 614 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKS 660



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 5/346 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            K  I+    + ++M   G + +   F  +++ Y + G  E A  +F+R+++  + PT  
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDT 473

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
               I+  L    R      +++     G  P    YN ++    K   ++ A  +  EM
Sbjct: 474 TLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREM 533

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKI 181
              G  P  V+YT+++   CK   ++ A +L     R G    +  Y  LI+G CK   +
Sbjct: 534 CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 593

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  LL E+   G+ PN   Y+++I+   ++ NVE ++ +  +M   G   ++ ++TSL
Sbjct: 594 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 653

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G L  GR   ASD+   M+ +G LP+  A++ LI+GLC+ G  + A  +   M   + 
Sbjct: 654 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNM 713

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            P+V  Y+ LI G  K GNL  A ++ + M+  G  P+ + Y  +V
Sbjct: 714 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 156/321 (48%), Gaps = 6/321 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K +I+    +  +MK   +  ++     +I    + G + +   +F +    G  PT  
Sbjct: 449 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 508

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN I+D  + E   ++ + +Y  M   G+ P+  TY  L+   CK N +D A KLL +M
Sbjct: 509 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 568

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKI 181
             KG   D  +Y T++   CK   ++ A EL     G+G+S    +YN++I G    + +
Sbjct: 569 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 628

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           EEA  L  +MV+ GI  ++ TY+++I  L   G +  +  I  +M  +G  P+  + T L
Sbjct: 629 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 688

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    G+   A  +   M  +  +P+V+ Y+TLI G    G++ EA  +  +M +   
Sbjct: 689 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGL 748

Query: 302 PPNVTTYSALIDG-FAKAGNL 321
            P+  TY  L++G F   GN 
Sbjct: 749 VPDNITYDILVNGKFKGDGNF 769



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 195/457 (42%), Gaps = 48/457 (10%)

Query: 149 GQVEEARELAMRFGSGVSV-YNALINGLC------------KEHKIEEAFWLLCEMVDRG 195
            +   A+ L  +F SG SV ++ L++ L             +E  I EA     +   RG
Sbjct: 129 AETHRAQYLFDQFASGKSVRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARG 188

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           ++ +   YS  +  LC   N   +L +L +M   G  P   +FTS++   +  G   EA 
Sbjct: 189 VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 248

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L + M+  G   N+   ++L+ G C  G++  A+ +  ++ E+   PN  TYS LIDG 
Sbjct: 249 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 308

Query: 316 AKAGNLLGASQIWNRMISNGCS----------------------------------PNVV 341
            K GN+  A + ++ M + G                                     NV 
Sbjct: 309 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF 368

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++  LC+    ++A +L +++  +   PN V++N  I G C    ++ A K+  +M
Sbjct: 369 TFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEM 428

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                 PN  T+  L+DG  +   ++ AF +   ++   I     T   I+ G+C+AG  
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            E   L  K + +G     + +N II  + K+G +N A  +   +   G   P  ++YTS
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG-ITPSTVTYTS 547

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           L+ G C    +  A   L  M  +G+  +   +  L+
Sbjct: 548 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 584



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 35/280 (12%)

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           + GN+L A Q + +  + G   +  AY+  V +LC       A SL+ +M      P   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           TF + I      G V  A++L D M       N+     L+ G      ++ A  LV EI
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK------------------- 477
            + G+  N VTY+ ++ G C+ G + +AF+   +M  +G +                   
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 478 ---------------LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
                           +  TFN ++   CK+GK+N A  L D +   G  +P+++SY ++
Sbjct: 350 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-ISPNVVSYNNI 408

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           + G C    +  A    ++ML+ G  PN  T+ +L+   F
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 448



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 97/208 (46%), Gaps = 30/208 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ ++     LL +++  G+S +  ++ S+I  ++ +   E+A+ ++ ++   G
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 642

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   +K Y  ++D LL   R    + I++ M   G+ P+   + +L+  LC   + + A 
Sbjct: 643 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENAR 702

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K+L +M  K   P  + Y T                              LI G  KE  
Sbjct: 703 KILEDMNGKNMIPSVLIYNT------------------------------LIAGHFKEGN 732

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           ++EAF L  EM+DRG+ P+ ITY  +++
Sbjct: 733 LQEAFRLHDEMLDRGLVPDNITYDILVN 760


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 271/584 (46%), Gaps = 45/584 (7%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
            +KV   +C+  + I  +    R+G  + +   F  I + G +    + N +L  L    
Sbjct: 91  SIKVAPNTCTYSILIGCLC---RMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGK 147

Query: 80  RF-SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN---KGCAPDA 135
           R    ++ +   M   G  P+  +Y+ILLK  C  NR + A +LL  M N   + C P+ 
Sbjct: 148 RVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNV 207

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGLCKEHKIEEAFWLLCE 190
           V+YTT++  +CK    + A  +  +   +GV      YN LI+G     K +E   +L +
Sbjct: 208 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEK 267

Query: 191 MVDRGIDPNVITYSTIISSLCDV--------------------------------GNVET 218
           M  RG+ P+  TY ++++ LC +                                G ++ 
Sbjct: 268 MSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDK 327

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ I  +M   G +PN+ ++ +L+      GR  +A   +N+MI EG  PN+V +++L++
Sbjct: 328 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 387

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC+    + A  + Y+M +    PN   ++ LI      G ++   ++ + M   G  P
Sbjct: 388 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 447

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +  +YT ++   C      +A  + + M      P  VT+NT + G C   R+D A  L 
Sbjct: 448 DAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF 507

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M +    P + TYN +L GL +  R  EA EL   +   G + +I TYN IL+G+C++
Sbjct: 508 REMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKS 567

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
             V EAF++   +  +G +L+ ITF I+I A  K G+  +A+ L   I   G   P++++
Sbjct: 568 NCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG-LVPNVVT 626

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           Y  +   +   G ++E       M   G  PN    N LVR L 
Sbjct: 627 YRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLL 670



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 266/575 (46%), Gaps = 64/575 (11%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-----------MINPIYSNMKRD- 94
           + ALK+F  +       +V  +N IL+A+   +R S           ++  +++ M R+ 
Sbjct: 31  DDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVREC 90

Query: 95  --GMEPNVFTYNILLKALCKNNRVDGAYK------------------------------- 121
              + PN  TY+IL+  LC+  R+  ++                                
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 122 -----LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--------GVSVY 168
                LL  M   GC PD VSY+ ++   C   + EEA EL     +         V  Y
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
             +I+GLCK    + A  +  +M+D G+ PN  TY+ +I     +G  +  + +L +M  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG  P+ +++ SLL         H   DL   M+  G  P+   ++         G +D+
Sbjct: 271 RGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCGMIDK 327

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ +  +M ++   PNV  Y ALID   K G +  A   +N+MI+ G +PN+V +  +V 
Sbjct: 328 AMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVY 387

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC  + + +A  L+ +M  +   PN V FNT I  LC  GRV    +L+D M+     P
Sbjct: 388 GLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 447

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +  +Y  L+ G     R  EA ++   +   G+    VTYNT+LHG C A  + +A+ L 
Sbjct: 448 DAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLF 507

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGIC 527
            +ML +G     +T+N I++   +  + + A +L L+ I  G +   DI +Y  +L G+C
Sbjct: 508 REMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKC--DIYTYNIILNGLC 565

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            S  + EAF   Q + ++G+  N  T+ +++ +L 
Sbjct: 566 KSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 600



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 250/508 (49%), Gaps = 8/508 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D  + + QQM   GV  +   +  +I+ Y  +G  ++ ++M  ++   GLKP    Y  
Sbjct: 223 FDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGS 282

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+ L A    S ++     M  +G+ P+   +NI   A  K   +D A  +  +M   G
Sbjct: 283 LLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 339

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAF 185
            +P+ V+Y  ++ ++CKLG+V++A  +       GV+    V+N+L+ GLC   K E A 
Sbjct: 340 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 399

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+ EM+D+GI PN + ++T+I +LC+VG V     ++  M   G  P+  S+T L+ GY
Sbjct: 400 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGY 459

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L GRT EA  +++ M+  G  P  V Y+TL+HG CS   +D+A  +  +M      P V
Sbjct: 460 CLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 519

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ ++ G  +      A +++  MI++G   ++  Y  ++  LC++N   +A  + + 
Sbjct: 520 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS 579

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +  +    N +TF   I  L   GR + AM L   +     +PN+ TY  + + L+    
Sbjct: 580 LCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGS 639

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           ++E   L + +EK G   N    N ++  +   G +  A   L K+      ++A T ++
Sbjct: 640 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSL 699

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           +I  +      ++A  L ++     E N
Sbjct: 700 LISIFTSDEYQHHAKSLPEKYHFLNEAN 727



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 241/531 (45%), Gaps = 14/531 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + ++ L       G SC   V  + +VI+   +  L ++A  +F ++ + G+KP    YN
Sbjct: 187 EALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYN 246

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++   L+  ++  +  +   M   G++P+ +TY  LL  LC  + +     L+VE    
Sbjct: 247 CLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE---N 303

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEA 184
           G +PD   +    S+  K G +++A ++   MR       V  Y ALI+ LCK  ++++A
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 363

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                +M++ G+ PN++ +++++  LC V   E +  ++ +M  +G  PN   F +L+  
Sbjct: 364 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 423

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  E   L + M   G  P+  +Y+ LI G C  G  DEA  V   M      P 
Sbjct: 424 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPT 483

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+ L+ G+  A  +  A  ++  M+  G +P VV Y  ++  L Q   F +A  L  
Sbjct: 484 EVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYL 543

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M       +  T+N  + GLC    VD A K+   +       NI T+  ++  LL+  
Sbjct: 544 NMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 603

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R ++A +L   I   G+  N+VTY  +   +   G + E   L   M   GT  ++   N
Sbjct: 604 RKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLN 663

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI-ISYTSLLWGICNSGGMQE 534
            ++     +G ++ A   L ++    E N  +  S TSLL  I  S   Q 
Sbjct: 664 ALVRRLLHRGDISRAGAYLSKL---DERNFSVEASTTSLLISIFTSDEYQH 711



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 194/401 (48%), Gaps = 7/401 (1%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C +  +   L  M   G+S    +F    ++Y + G+ ++A+ +F ++R+ GL P V  Y
Sbjct: 288 CALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNY 347

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++DAL    R       ++ M  +G+ PN+  +N L+  LC  ++ + A +L+ EM +
Sbjct: 348 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLD 407

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIE 182
           +G  P+AV + T++ ++C +G+V E R L +     V V      Y  LI+G C   + +
Sbjct: 408 QGICPNAVFFNTLICNLCNVGRVMEGRRL-IDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +   MV  G+ P  +TY+T++   C    ++ +  +  +M  +G  P + ++ ++L
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 526

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G     R  EA +L+  MI  G   ++  Y+ +++GLC +  +DEA  +   +      
Sbjct: 527 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 586

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            N+ T++ +I    K G    A  ++  + +NG  PNVV Y  + + L +     +  SL
Sbjct: 587 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSL 646

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              M      PN+   N  ++ L   G +  A   L ++ +
Sbjct: 647 FSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 687



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 86/159 (54%), Gaps = 3/159 (1%)

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN  TY+ L+  L R+ R+K +F     I K G ++N +  N +L G+C    V EA  +
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155

Query: 468 LGKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG--GGEWNPDIISYTSLLW 524
           L + + E G   D ++++I++  +C + +   A++LL  +    G    P++++YT+++ 
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           G+C +     A    Q+M++ G+ PN  T+N L+    S
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLS 254


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 267/510 (52%), Gaps = 23/510 (4%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALL-AENRFSMINPIYSNMKRDGMEPNVFTY 103
           + + A+  F R+R+    P++  +N IL  L+  +N +  +  + + M+  G++P++FT 
Sbjct: 46  VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELA 158
           +IL+   C   ++  A+ +  ++   G              +C  G+V EA       LA
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMG--------------LCLNGKVNEALLFHDHVLA 151

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           + F      Y  LINGLCK  +   A  +L ++  + ++ NV+ YSTII  LC    V  
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           + G+  +M V+   P + +F+SL+ G+ + G+  +A  L+N M+ +   P+   ++ L+ 
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            LC  G + EA +V   M +    P V TY+ L+DG+     +  A  + + +     +P
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAP 331

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           N  +Y  M+   C+  M  +A  L  +M      P+ VT+N+ I GLC  GR+ +A +L+
Sbjct: 332 NSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELV 391

Query: 399 DQMKQYECLP-NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           D+M    C+P +I TYN L+D   +   V +A  LV +I++ GIQ N+ TYN ++ G+C+
Sbjct: 392 DEMHN-NCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCK 450

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G +  A  +   +LI+G  ++A T+NI+I   CK+G  + A  LL ++   G   PD +
Sbjct: 451 GGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNG-IIPDAV 509

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
           +Y +++  + +    ++A   L++M+ +G+
Sbjct: 510 TYETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 236/477 (49%), Gaps = 13/477 (2%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCK-NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++ M++    P++  +N +L  L K  N       L  +M +KG  PD  + + +++  C
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 147 KLGQVEEARELAMRFGSGVSVYNALIN-GLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            LGQ+  A           SV+  ++  GLC   K+ EA      ++  G   N +TY  
Sbjct: 114 HLGQMTFA----------FSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGI 163

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+ LC +G    +L +L Q+  +  N N+  +++++ G        +A  L++ MI + 
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P VV +S+LI+G C  G   +A  +  +M   +  P+  T++ L+D   K G +  A 
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAK 283

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +   M+  G  P VV Y  ++   C  N   +A  ++  ++     PN+ ++N  I G 
Sbjct: 284 NVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGF 343

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C    VD A+ L  +M      P+  TYN L+DGL +  R+  A+ELV E+    I  +I
Sbjct: 344 CKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADI 403

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYN+++   C+   V +A  L+ K+   G + +  T+NI+I   CK G++ NA  +   
Sbjct: 404 VTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQD 463

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +   G +N +  +Y  ++ G+C  G   EA + L KM + GI P+  T+  ++++LF
Sbjct: 464 LLIKG-YNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALF 519



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 236/483 (48%), Gaps = 36/483 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL--DA 74
           L  QM+ +GV         +IN Y  +G    A  +F +I + GL    K+   +L  D 
Sbjct: 89  LSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDH 148

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           +LA                 G   N  TY IL+  LCK  +   A ++L ++  K    +
Sbjct: 149 VLAL----------------GFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTN 192

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V Y+TI+  +CK   V +A  L       R    V  +++LI G C   K ++AF L  
Sbjct: 193 VVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFN 252

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EMV + I+P+  T++ ++ +LC  G ++ +  ++  M   G  P + ++ +L+ GY L  
Sbjct: 253 EMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVN 312

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +A  + + + R    PN  +Y+ +I+G C    +DEA+ + ++M      P+  TY+
Sbjct: 313 EVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYN 372

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +LIDG  KAG +  A ++ + M +N    ++V Y  ++ V C+N    +A +L++K+   
Sbjct: 373 SLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEH 432

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNITTYNELLDGLLRVNRVK 427
              PN  T+N  I GLC  G++  A  +   +  K Y    N  TYN +++GL +     
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNV--NAWTYNIMINGLCKEGLFD 490

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA  L++++E  GI  + VTY TI+  +       +A +LL +M+I+G         +++
Sbjct: 491 EAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG---------VVV 541

Query: 488 YAY 490
           YA+
Sbjct: 542 YAF 544



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 168/337 (49%), Gaps = 9/337 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M V+ +  +   F S+I  +  VG  + A ++F  +    + P    +N ++DAL 
Sbjct: 215 LYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALC 274

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      + + M ++G+EP V TYN L+   C  N V  A  +L  +     AP++ 
Sbjct: 275 KEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSR 334

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  +++  CK+  V+EA     E+  R        YN+LI+GLCK  +I  A+ L+ EM
Sbjct: 335 SYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  I  +++TY+++I   C   +V+ ++ ++ ++   G  PN+ ++  L+ G   GG+ 
Sbjct: 395 HNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQL 454

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A D++  ++ +G+  N   Y+ +I+GLC  G  DEA  +  +ME+N   P+  TY  +
Sbjct: 455 KNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI 514

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           I           A ++   M+  G    VV Y   ++
Sbjct: 515 IQALFHKDENEKAQKLLREMVIKG----VVVYAFEIR 547



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 30/220 (13%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L  +M   G++  +  + S+I+   + G    A ++   +    +   +  YN 
Sbjct: 349 VDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNS 408

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D             +   +K  G++PN+ TYNIL+  LCK  ++  A  +  ++  KG
Sbjct: 409 LIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKG 468

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
              +A +Y  +++ +CK G  +EA                                LL +
Sbjct: 469 YNVNAWTYNIMINGLCKEGLFDEAE------------------------------VLLSK 498

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           M D GI P+ +TY TII +L      E +  +L +M ++G
Sbjct: 499 MEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG 538



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 1/141 (0%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    L++++K  G+  +   +  +I+   + G  + A  +F  +   G       YN
Sbjct: 418 HVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYN 477

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E  F     + S M+ +G+ P+  TY  +++AL   +  + A KLL EM  K
Sbjct: 478 IMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIK 537

Query: 130 GCAPDAVS-YTTIVSSICKLG 149
           G    A     T+V     LG
Sbjct: 538 GVVVYAFEIRRTLVGRTLNLG 558


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 270/555 (48%), Gaps = 8/555 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + V+   Q  +   V C+   + ++I  Y   G  ++A  +  R +  G  P+V  YN I
Sbjct: 73  EAVELFEQLEQNRKVPCAYA-YNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCI 131

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L  + R      I+  MKRD + PNV TYNIL+  LC+  +++ A ++  +M   G 
Sbjct: 132 LTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGL 190

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LINGLCKEHKIEEAFW 186
            P+ ++   ++  +CK  ++EEA  +       V   NA     LI+GL K  ++++A+ 
Sbjct: 191 FPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYS 250

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  +M+D G  P  I Y+++I S    G  E    I  +M   GC+P++    + +    
Sbjct: 251 LYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVF 310

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T +   L+  +   GF+P+  +YS LIHGL   G  +E   + Y M+E  C  +  
Sbjct: 311 KAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 370

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            Y+A+IDGF K+G +  A Q+   M   G  P VV Y  ++  L + +   +A+ L E+ 
Sbjct: 371 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 430

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  N V +++ I G    GR+D A  +++++ Q    PN+ T+N LLD L++   +
Sbjct: 431 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 490

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA      ++      N +TY+ +++G+CR     +AF    +M   G K + IT+  +
Sbjct: 491 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 550

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I    K G +  A  L  R +  G   PD  SY +++ G+ ++    +A+   ++   +G
Sbjct: 551 ISGLAKAGNILEASGLFSRFKANGGI-PDSASYNAMIEGLSSANKAMDAYALFEETRLKG 609

Query: 547 ICPNFATWNVLVRSL 561
              +  T  VL+ +L
Sbjct: 610 CNIHTKTCVVLLDAL 624



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 272/555 (49%), Gaps = 15/555 (2%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD------- 73
           M + G   S  + I ++ +  +     +A  +   +R+F  +P    Y  ++        
Sbjct: 1   MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60

Query: 74  ---ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
               L   NR      ++  ++++   P  + YN ++       + D AY LL     KG
Sbjct: 61  FPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 120

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
             P  ++Y  I++ + K  +VEEA     E+       V  YN LI+ LC+E K+  A  
Sbjct: 121 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALE 180

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           +  +M   G+ PNV+T + +I  LC    +E +  I   M  + C PN  +F+SL+ G  
Sbjct: 181 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 240

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  +A  L+ +M+  G +P  + Y++LI      G  ++   +  +M    C P++T
Sbjct: 241 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 300

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
             +  +D   KAG       ++  + ++G  P+  +Y+ ++  L +  + ++ + L   M
Sbjct: 301 LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM 360

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             + C  +T  +N  I G C  G+V+ A +LL++MK     P + TY  ++DGL +++R+
Sbjct: 361 KEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRL 420

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA+ L  E +  GI+LN+V Y++++ G  + G + EA+ ++ +++ +G   +  T+N +
Sbjct: 421 DEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 480

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           + A  K  ++N A+     ++   +  P+ I+Y+ L+ G+C      +AF++ Q+M   G
Sbjct: 481 LDALVKAEEINEALICFQSMK-DLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 539

Query: 547 ICPNFATWNVLVRSL 561
           + PN  T+  ++  L
Sbjct: 540 LKPNTITYTTMISGL 554



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/532 (25%), Positives = 244/532 (45%), Gaps = 41/532 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G   + D    LL++ K +G   S   +  ++    +    E+AL++F  ++   
Sbjct: 96  MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 155

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN ++D L  E + +    I  +M+R G+ PNV T NI++  LCK  +++ A 
Sbjct: 156 V-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEAC 214

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            +   M +K C P+AV++++++  + K G+V++A  L  +        G  VY +LI   
Sbjct: 215 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSF 274

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVI---------------------------------- 201
            K  + E+   +  EMV  G  P++                                   
Sbjct: 275 FKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDA 334

Query: 202 -TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            +YS +I  L   G    +  +   M  +GC  + H++ +++ G+   G+ ++A  L   
Sbjct: 335 RSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEE 394

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P VV Y ++I GL     +DEA  +  + + N    NV  YS+LIDGF K G 
Sbjct: 395 MKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGR 454

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  I   ++  G +PNV  + C++  L +    ++A    + M    CPPN +T++ 
Sbjct: 455 IDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSI 514

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLC   + + A     +M++    PN  TY  ++ GL +   + EA  L +  +  G
Sbjct: 515 LINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANG 574

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              +  +YN ++ G+  A   ++A+ L  +  ++G  +   T  +++ A  K
Sbjct: 575 GIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK 626



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 200/436 (45%), Gaps = 6/436 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A  +F  + +    P    ++ ++D L    R      +Y  M   G  P    Y  L
Sbjct: 211 EEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSL 270

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           +++  K  R +  +K+  EM + GC+PD     T +  + K G+ E+ R L     A  F
Sbjct: 271 IRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGF 330

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y+ LI+GL K     E + L   M ++G   +   Y+ +I   C  G V  +  
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M V+G  P + ++ S++ G     R  EA  L+      G   NVV YS+LI G  
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA  +  ++ +    PNV T++ L+D   KA  +  A   +  M    C PN +
Sbjct: 451 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 510

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ ++  LC+   F++A    ++M      PNT+T+ T I GL   G +  A  L  + 
Sbjct: 511 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF 570

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           K    +P+  +YN +++GL   N+  +A+ L  E    G  ++  T   +L  + +A  +
Sbjct: 571 KANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECL 630

Query: 462 VEAFQLLGKMLIEGTK 477
            +A  ++G +L E  K
Sbjct: 631 EQA-AIVGAVLKETAK 645



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 200/434 (46%), Gaps = 5/434 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI++L +  +++    + + M  +  + +   F S+I+   + G  + A  ++ ++ + G
Sbjct: 200 MIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCG 259

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P   +Y  ++ +     R    + IY  M   G  P++   N  +  + K    +   
Sbjct: 260 HVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGR 319

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV---SVYNALINGL 175
            L  E+   G  PDA SY+ ++  + K G   E  EL  AM+    V     YNA+I+G 
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGF 379

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+ +A+ LL EM  +G  P V+TY ++I  L  +  ++ +  +  +    G   N+
Sbjct: 380 CKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNV 439

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             ++SL+ G+   GR  EA  +   ++++G  PNV  ++ L+  L     ++EA+     
Sbjct: 440 VVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQS 499

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M++  CPPN  TYS LI+G  +      A   W  M   G  PN + YT M+  L +   
Sbjct: 500 MKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGN 559

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L  +       P++ ++N  I+GL    +   A  L ++ +   C  +  T   
Sbjct: 560 ILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVV 619

Query: 416 LLDGLLRVNRVKEA 429
           LLD L +   +++A
Sbjct: 620 LLDALHKAECLEQA 633



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 124/270 (45%), Gaps = 12/270 (4%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK----------VLCQ 352
           P+      L+    K+  L  A  I   M      P   AYT ++           VLC+
Sbjct: 8   PSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCK 67

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
            N   +A  L E++      P    +NT I G    G+ D A  LL++ K    +P++  
Sbjct: 68  ANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIA 127

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN +L  L +  RV+EA  +  E+++  +  N+ TYN ++  +CR G +  A ++   M 
Sbjct: 128 YNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDME 186

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   + +T NI+I   CK  K+  A  + + +       P+ ++++SL+ G+   G +
Sbjct: 187 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM-DDKVCTPNAVTFSSLIDGLGKCGRV 245

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +A+   +KML+ G  P    +  L+RS F
Sbjct: 246 DDAYSLYEKMLDCGHVPGAIVYTSLIRSFF 275


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 262/528 (49%), Gaps = 10/528 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++ +Y RVG+ ++A+   ++ +  G  P +   N +++ L+   +  M   IY ++KR G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PN +TY I +KALC+    + A  +  EM   G  P+AV+ +T +  +C   + +   
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 156 EL--AMRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E   A+R  +       Y A+I G C E K++EA  +  +MV+ GI P+   Y  +I + 
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAY 342

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  GN+  ++ +   M   G   N    +S+L+     G   E  D +      G   + 
Sbjct: 343 CKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDE 402

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ ++  LC  G ++EAV +  +M+      +V  Y+ LI G+   G L+ A  ++  
Sbjct: 403 VLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEE 462

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  P++V Y  +V    +N +  +A  L++ +  +   PN+ T N  I+GLC  G+
Sbjct: 463 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK 522

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           V  A   L+ ++  +CL N   Y+ ++DG  + N  ++A+EL + + K GI +   +   
Sbjct: 523 VKEAEAFLNTLED-KCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFK 578

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L  +C  G   +A  LL +ML    + + I +  +I A+C+ G +  A  + D +   G
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 638

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              PD+I+YT ++ G C    ++EA      M   GI P+  T+ V++
Sbjct: 639 -ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVL 685



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 272/559 (48%), Gaps = 30/559 (5%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
            V+CS   +I  + S++R  L  +AL+    +R          Y  ++    +E +    
Sbjct: 262 AVTCS--TYIEGLCSHKRSDLGYEALRA---LRAANWPIDTFAYTAVIRGFCSEMKLKEA 316

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             ++ +M  +G+ P+ + Y  L+ A CK   +  A  L  +M + G   + V  ++I+  
Sbjct: 317 EDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQC 376

Query: 145 ICKLGQVEEARELAMRF-GSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +C++G   E  +    F  SG+     +YN +++ LCK  K+EEA  LL EM  R +  +
Sbjct: 377 LCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLD 436

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+ Y+T+I+  C  G +  +  +  +M  RG  P+I ++  L+ G+   G   EA +L +
Sbjct: 437 VVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLD 496

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +  +G  PN   ++ +I GLC  G + EA +    +E+  C  N   YSA++DG+ KA 
Sbjct: 497 CIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK-CLEN---YSAMVDGYCKAN 552

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A ++++R+   G      +   ++  LC    + +A  L+E+M   +  PN + + 
Sbjct: 553 FTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYG 612

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I   C  G +  A  + D + +    P++ TY  +++G  RVN ++EA ++  ++++ 
Sbjct: 613 KLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKER 672

Query: 440 GIQLNIVTYNTILHGVCRAGMVV---------------EAFQLLGKMLIEGTKLDAITFN 484
           GI+ +++TY  +L G  +  + +               +A     +M   G K D + + 
Sbjct: 673 GIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYT 732

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           ++I ++CK   + +AI L D +   G   PDI++YT+LL   C+ G M  A   + +M  
Sbjct: 733 VLIDSHCKTNNLQDAINLYDEMIARG-LQPDIVTYTALLSSCCSRGDMDRAITLVNEMSF 791

Query: 545 EGICPNFATWNVLVRSLFS 563
           +GI P+    +VL R +  
Sbjct: 792 KGIEPDSRAMSVLHRGILK 810



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 232/495 (46%), Gaps = 26/495 (5%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           EG++    ++ ++I++Y + G   QA+ +   +   G+K    I + IL  L      S 
Sbjct: 326 EGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASE 385

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           +   +   +  G+  +   YNI++ ALCK  +V+ A +LL EM  +  + D V YTT+++
Sbjct: 386 VVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIA 445

Query: 144 SICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
             C  G++ +A+    E+  R     +  YN L+ G  +    +EA  LL  +  +G+ P
Sbjct: 446 GYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKP 505

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  T++ II  LC  G V+ +   L  +     +  + ++++++ GY     T +A +L+
Sbjct: 506 NSATHNRIIEGLCMAGKVKEAEAFLNTLE----DKCLENYSAMVDGYCKANFTRKAYELF 561

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           +R+ ++G L    +   L+  LC  G  D+A+ +  +M      PN   Y  LI  F + 
Sbjct: 562 SRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRD 621

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G++  A  +++ ++  G +P+V+ YT M+   C+ N   +A  +   M      P+ +T+
Sbjct: 622 GDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITY 681

Query: 379 NTFIKGLCGCG----------------RVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
              + G                     ++D A     +MK+    P++  Y  L+D   +
Sbjct: 682 TVVLDGHSKVNLKMARSLQFSKGSEEEKMD-ASPFWSEMKEMGIKPDVVCYTVLIDSHCK 740

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            N +++A  L  E+   G+Q +IVTY  +L   C  G +  A  L+ +M  +G + D+  
Sbjct: 741 TNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRA 800

Query: 483 FNIIIYAYCKQGKVN 497
            +++     K  KV 
Sbjct: 801 MSVLHRGILKARKVQ 815



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/426 (23%), Positives = 201/426 (47%), Gaps = 16/426 (3%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            ++ +  G+   E ++  V+++  ++G  E+A+++   ++   +   V  Y  ++     
Sbjct: 390 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL 449

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           + +      ++  MK  G+EP++ TYNIL+    +N     A +LL  +G +G  P++ +
Sbjct: 450 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 509

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSG-VSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +  I+  +C  G+V+EA           +  Y+A+++G CK +   +A+ L   +  +GI
Sbjct: 510 HNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGI 569

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
                +   ++SSLC  G  + +L +L +M      PN   +  L+  +   G    A  
Sbjct: 570 LVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQL 629

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +++ ++  G  P+V+ Y+ +I+G C    + EA  +   M+E    P+V TY+ ++DG +
Sbjct: 630 VFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHS 689

Query: 317 KAG---------------NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           K                   + AS  W+ M   G  P+VV YT ++   C+ N    A +
Sbjct: 690 KVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAIN 749

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L ++M      P+ VT+   +   C  G +D A+ L+++M      P+    + L  G+L
Sbjct: 750 LYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGIL 809

Query: 422 RVNRVK 427
           +  +V+
Sbjct: 810 KARKVQ 815



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 228/496 (45%), Gaps = 23/496 (4%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            ++ +K  G + NV TY  L++ LC+         LL E+   G     + +   ++++ 
Sbjct: 83  FFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEI--VGSKESVLGFD--ITALF 138

Query: 147 KLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            + +              + V + L+    +    +EA   L +   RG  P++++ + +
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++ L + G ++ ++ I   +   G NPN +++   +K     G   EA D++  M   G 
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN V  ST I GLCS+   D        +   + P +   Y+A+I GF     L  A  
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M++ G +P+   Y  ++   C+     QA +L   M       N V  ++ ++ LC
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLC 378

Query: 387 GCGRVDWAMKLLDQMKQYE---CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
             G    A +++DQ K++       +   YN ++D L ++ +V+EA EL+ E++   + L
Sbjct: 379 EMG---MASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSL 435

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++V Y T++ G C  G +V+A  +  +M   G + D +T+NI++  + + G    A++LL
Sbjct: 436 DVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELL 495

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN----------EGICPNFAT 553
           D I G     P+  ++  ++ G+C +G ++EA  +L  + +          +G C   A 
Sbjct: 496 DCI-GTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCK--AN 552

Query: 554 WNVLVRSLFSNLGHLG 569
           +      LFS L   G
Sbjct: 553 FTRKAYELFSRLSKQG 568



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 159/410 (38%), Gaps = 97/410 (23%)

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS---NGSMDEAVSVSYQMEENSC 301
           Y L    + A   + ++   GF  NV  Y+ LI  LC       +   +S     +E+  
Sbjct: 71  YNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVL 130

Query: 302 PPNVTT-----------------------YSALIDGFAKAG------------------- 319
             ++T                           L+  + + G                   
Sbjct: 131 GFDITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVP 190

Query: 320 NLLGASQIWNRMISNGCSPNVVA----------------YTCMVKVLCQNNMFHQAHSLI 363
           +++  + + NR+I +G     VA                Y   +K LC+   F +A  + 
Sbjct: 191 HIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVF 250

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M      PN VT +T+I+GLC   R D   + L  ++      +   Y  ++ G    
Sbjct: 251 REMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSE 310

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK------ 477
            ++KEA ++  ++   GI  +   Y  ++H  C+AG +++A  L   M+  G K      
Sbjct: 311 MKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIV 370

Query: 478 -----------------------------LDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
                                        LD + +NI++ A CK GKV  A++LL+ ++ 
Sbjct: 371 SSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMK- 429

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G   + D++ YT+L+ G C  G + +A    ++M   GI P+  T+N+LV
Sbjct: 430 GRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 479



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 121/283 (42%), Gaps = 27/283 (9%)

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK--------MAFE------ 369
           A   + ++  +G   NV  Y  +++VLC+  +  +  SL+ +        + F+      
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 370 ------------NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
                       +     +  +  +K     G  D A+  L Q K+   +P+I + N L+
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLM 199

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           + L+   ++  A  +   +++ G+  N  TY   +  +CR G   EA  +  +M   G  
Sbjct: 200 NRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN 259

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            +A+T +  I   C   + +   + L  +R    W  D  +YT+++ G C+   ++EA  
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN-WPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
               M+NEGI P+   +  L+ +       L  V + +D+++N
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSN 361


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 258/509 (50%), Gaps = 7/509 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           E G + +   Y+ +L  L   N   +   +Y  M  +G       Y  ++ ALCKN  V 
Sbjct: 86  ELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQ 145

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS------VYNAL 171
            A     ++   G   D    T++V + C+   + EA  +  +     S       Y+ L
Sbjct: 146 AAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSIL 205

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+GLC+  ++EEAF L  EMV++G  P+  TY+ +I + CD+G  + ++ +L +M  + C
Sbjct: 206 IHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKAC 265

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN+H++T L+      G+  EA+ ++ +M++ G  P ++ ++ LI+G C  G +  A  
Sbjct: 266 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 325

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   ME+ +C PN+ TY+ L++G  +      A  +  R++ NG  P+ V Y  +V   C
Sbjct: 326 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 385

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +    + A ++   M      P+  TF   I GLC  GR++ A  +L  M +     +  
Sbjct: 386 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 445

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+  L+DG  ++ + K+   L   + +        T+N  L  + +   + EA  +LGKM
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 505

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +  G     +T  I+I  +C+ G+   ++++L+R++  G  +P++ +YT ++ G+CN+G 
Sbjct: 506 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG-CSPNVYTYTIIINGLCNNGR 564

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++EA   L  M + G+ PN  T+ VLV++
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKA 593



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 154/587 (26%), Positives = 281/587 (47%), Gaps = 49/587 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   ++    L Q+M  +G   S   +  +I +   +G+ ++A+KM   +    
Sbjct: 205 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 264

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L  E +    N ++  M + G+ P + T+N L+   CK   V  A+
Sbjct: 265 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 324

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGV----SVYNALINGL 175
           +LL  M    C P+  +Y  ++  +C++ +  +A  L  R   +G+      YN L++G 
Sbjct: 325 QLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 384

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++  AF +   M   G++P+  T++ +I  LC +G +E + GILG M  +G + + 
Sbjct: 385 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 444

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT+L+ G+   G+  +   L+  M+    L     ++  +  L  +  ++EA ++  +
Sbjct: 445 VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 504

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+V T++ LI+G  +AG    + ++  RM   GCSPNV  YT ++  LC N  
Sbjct: 505 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 564

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +++  M+     PN  T+   +K     GR+D A +++  M +  C PN   Y+ 
Sbjct: 565 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 624

Query: 416 LLDG-------------------------------------LLRVNRVKEAFELVTEIEK 438
           LL G                                     + R+  V  A ++  EI+K
Sbjct: 625 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKK 684

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
           CG+    + YN ++ G+C+ G ++EA QL   M+  G   D    +II + YCK  K +N
Sbjct: 685 CGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCKTCKYDN 742

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
            ++ + ++    ++ P   SY  ++ G+ N G +QEA    QK++++
Sbjct: 743 CLEFM-KLVLDNKFVPSFASYCWVIHGLRNEGRVQEA----QKLVSD 784



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 250/501 (49%), Gaps = 9/501 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM- 91
           + +V+N+  + G  + A     ++   G      +   ++ A    +       ++  M 
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 190

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K +   PN  TY+IL+  LC+  R++ A++L  EM  KGC P   +YT ++ + C +G  
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A ++     +      V  Y  LI+ LC+E KIEEA  +  +M+  G+ P +IT++ +
Sbjct: 251 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 310

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C  G V ++  +L  M    C PNI ++  L++G     ++++A  L  R++  G 
Sbjct: 311 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+ V Y+ L+ G C  G ++ A ++   M      P+  T++ALIDG  K G L  A+ 
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 430

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I   M+  G S + V +T ++   C+         L E M    C     TFN F+  L 
Sbjct: 431 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 490

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +++ A  +L +M +Y  +P++ T+  L++G  R      + +++  +++ G   N+ 
Sbjct: 491 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 550

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR- 505
           TY  I++G+C  G V EA  +L  M   G   +  T+ +++ A+ K G+++ A Q++   
Sbjct: 551 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 610

Query: 506 IRGGGEWNPDIISYTSLLWGI 526
           ++ G + N  I  Y++LL G 
Sbjct: 611 VKNGCQPNSHI--YSALLSGF 629



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 241/468 (51%), Gaps = 7/468 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----REL 157
           Y+ LL  L K N    A+ +   M N+G     + Y T+V+++CK G V+ A     + L
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNV 216
            + FG    V  +L+   C+   + EAF +  +M  +    PN +TYS +I  LC+ G +
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRL 215

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +  +  +M  +GC P+  ++T L+K     G T +A  + + M  +  +PNV  Y+ L
Sbjct: 216 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC  G ++EA  V  +M ++   P + T++ALI+G+ K G ++ A Q+ + M    C
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN+  Y  +++ LC+ +  ++A  L+ ++      P+ VT+N  + G C  G+++ A  
Sbjct: 336 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 395

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + + M      P+  T+  L+DGL ++ R+++A  ++  + K GI L+ VT+  ++ G C
Sbjct: 396 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 455

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G   +   L   M+       A TFN  + A  K  K+N A  +L ++   G   P +
Sbjct: 456 KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG-LVPSV 514

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +++T L+ G C +G    +   L++M   G  PN  T+ +++  L +N
Sbjct: 515 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 562



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 150/570 (26%), Positives = 260/570 (45%), Gaps = 56/570 (9%)

Query: 36  VINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           V+ + RR  L E A ++F ++ +E   +P    Y+ ++  L    R      +   M   
Sbjct: 170 VLANCRRDDLGE-AFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G +P+  TY +L+KA C     D A K+L EM  K C P+  +YT ++  +C+ G++EEA
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288

Query: 155 ----REL---------------------------------AMRFGS---GVSVYNALING 174
               R++                                  M  G+    +  YN L+ G
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+  K  +AF LL  +VD G+ P+ +TY+ ++   C  G +  +  I   M   G  P+
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +FT+L+ G    GR  +A+ +   M+++G   + V ++ LI G C  G   +   +  
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 468

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M EN C     T++  +D   K   L  A+ +  +M+  G  P+VV +T +++  C+  
Sbjct: 469 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 528

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               +  ++E+M    C PN  T+   I GLC  GRV+ A  +L  M  +   PN  TY 
Sbjct: 529 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 588

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+   ++  R+  AF++V+ + K G Q N   Y+ +L     +G V+    +  + L  
Sbjct: 589 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL-----SGFVLSNTAIGARALSS 643

Query: 475 GTKLDAITF-------NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              LDA +        N +     +   V++A+++ D I+  G    D+  Y  L+ G+C
Sbjct: 644 TGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL--YNFLVVGLC 701

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
             G + EA    Q M+  G+ P+ A  +++
Sbjct: 702 KEGRIIEADQLTQDMVKHGLFPDKAISSII 731



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 182/407 (44%), Gaps = 45/407 (11%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG   + +G+   L  M  +G+S  E  F ++I+ + ++G A+    +F  + E     
Sbjct: 421 KLGRLEQANGI---LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           T   +N  LDAL  + + +  N +   M + G+ P+V T+ IL++  C+      + K+L
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 537

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
             M   GC+P+  +YT I++ +C  G+VEEA                             
Sbjct: 538 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAE---------------------------- 569

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              +L  M   G+ PN  TY+ ++ +    G ++ +  I+  M   GC PN H +++LL 
Sbjct: 570 --TILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 627

Query: 244 GYLL-----GGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           G++L     G R   ++ DL  R +      N    S +   +     +D A+ +  +++
Sbjct: 628 GFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLM----DVDHALKIRDEIK 683

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +   P     Y+ L+ G  K G ++ A Q+   M+ +G  P+  A + +++  C+   + 
Sbjct: 684 KCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYD 741

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
                ++ +      P+  ++   I GL   GRV  A KL+  + ++
Sbjct: 742 NCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 788



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           M  LD M +     +   Y+ LL  L ++N    AF +   +   G  L  + Y T+++ 
Sbjct: 78  MGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNA 137

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ G V  A     K+L  G  LD      ++ A C++  +  A ++ +++       P
Sbjct: 138 LCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRP 197

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           + ++Y+ L+ G+C +G ++EAF   Q+M+ +G  P+  T+ VL+++   ++G       +
Sbjct: 198 NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK-CDIGMTDKAMKM 256

Query: 575 DDIMANK 581
            D MA K
Sbjct: 257 LDEMATK 263



 Score = 45.4 bits (106), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 43/239 (17%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++  + +L  M   GVS +   +  ++ ++ + G  ++A ++   + + G +P   IY+
Sbjct: 564 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 623

Query: 70  HILDALLAENR--------------------------------FSMINPIYSNMKRDGME 97
            +L   +  N                                 F +++  ++   RD ++
Sbjct: 624 ALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK 683

Query: 98  ----PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
               P    YN L+  LCK  R+  A +L  +M   G  PD  + ++I+   CK  + + 
Sbjct: 684 KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDN 742

Query: 154 ARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTI 206
             E     L  +F    + Y  +I+GL  E +++EA  L+ ++V   GI+  V    +I
Sbjct: 743 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI 801


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 242/453 (53%), Gaps = 5/453 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    +N+IL +L+    +  +  ++   + +G+ P++ T +IL+   C    +  A+ +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
              +  +G  P+A++  T++  +C  G++++A     + +A  F      Y  LINGLCK
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             + +    LL ++    + P+V+ Y+TII+SLC    +  +  +  +M V+G +P++ +
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +T+L+ G+ + G   EA  L N M  +   PNV  ++ LI  L   G M EA  +   M 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    P+V TY++LIDG+     +  A  ++  M   G +P+V  YT M+  LC+  M  
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A SL E+M  +N  P+ VT+N+ I GLC    ++ A+ L  +MK+    P++ +Y  LL
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL +  R+++A E+   +   G  LN+  Y  +++ +C+AG   EA  L  KM  +G  
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            DA+TF+III A  ++ + + A ++L  +   G
Sbjct: 475 PDAVTFDIIIRALFEKDENDKAEKILREMIARG 507



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 201/405 (49%), Gaps = 1/405 (0%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L MR       +N +++ L           L  +    GI P++ T S +I+  C   ++
Sbjct: 49  LLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHI 108

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +   +  RG +PN  +  +L+KG    G   +A    ++++ +GF  + V+Y TL
Sbjct: 109 TLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTL 168

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+GLC  G       +  ++E +S  P+V  Y+ +I+   K   L  A  +++ MI  G 
Sbjct: 169 INGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGI 228

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           SP+VV YT ++   C      +A SL+ +M  +N  PN  TFN  I  L   G++  A  
Sbjct: 229 SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKI 288

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  M +    P++ TYN L+DG   V+ VK A  +   + + G+  ++  Y  +++G+C
Sbjct: 289 LLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +  MV EA  L  +M  +    D +T+N +I   CK   +  AI L  R++  G   PD+
Sbjct: 349 KTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG-IQPDV 407

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            SYT LL G+C SG +++A    Q++L +G   N   + VL+  L
Sbjct: 408 YSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/431 (24%), Positives = 213/431 (49%), Gaps = 5/431 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           + +F +    G+ P +   + +++    +   ++   +++N+ + G  PN  T N L+K 
Sbjct: 77  ISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKG 136

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSG 164
           LC    +  A     ++  +G   D VSY T+++ +CK G+ +    L  +         
Sbjct: 137 LCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPD 196

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V +YN +IN LCK   + +A  +  EM+ +GI P+V+TY+T+I   C +G+++ +  +L 
Sbjct: 197 VVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLN 256

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M ++  NPN+ +F  L+      G+  EA  L   M++    P+V  Y++LI G     
Sbjct: 257 EMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVD 316

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +  A  V Y M +    P+V  Y+ +I+G  K   +  A  ++  M      P++V Y 
Sbjct: 317 EVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYN 376

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC+N+   +A +L ++M  +   P+  ++   + GLC  GR++ A ++  ++   
Sbjct: 377 SLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK 436

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               N+  Y  L++ L +     EA +L +++E  G   + VT++ I+  +       +A
Sbjct: 437 GYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKA 496

Query: 465 FQLLGKMLIEG 475
            ++L +M+  G
Sbjct: 497 EKILREMIARG 507



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 201/425 (47%), Gaps = 5/425 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +Q +  G++        +IN +        A  +F  I + G  P     N ++  L 
Sbjct: 79  LFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLC 138

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  +   G + +  +Y  L+  LCK        +LL ++      PD V
Sbjct: 139 FRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 198

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y TI++S+CK   + +A     E+ ++     V  Y  LI+G C    ++EAF LL EM
Sbjct: 199 MYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM 258

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             + I+PNV T++ +I +L   G ++ +  +L  M      P++ ++ SL+ GY L    
Sbjct: 259 KLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEV 318

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++  M + G  P+V  Y+ +I+GLC    +DEA+S+  +M+  +  P++ TY++L
Sbjct: 319 KHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSL 378

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K  +L  A  +  RM   G  P+V +YT ++  LC++     A  + +++  +  
Sbjct: 379 IDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGY 438

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             N   +   I  LC  G  D A+ L  +M+   C+P+  T++ ++  L   +   +A +
Sbjct: 439 HLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEK 498

Query: 432 LVTEI 436
           ++ E+
Sbjct: 499 ILREM 503



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 176/375 (46%), Gaps = 40/375 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  + EI    Y   Q+  +G    +  + ++IN   + G  +   ++  ++    
Sbjct: 133 LIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHS 192

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V +YN I+++L           +YS M   G+ P+V TY  L+   C    +  A+
Sbjct: 193 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAF 252

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR------------------------- 155
            LL EM  K   P+  ++  ++ ++ K G+++EA+                         
Sbjct: 253 SLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGY 312

Query: 156 --------------ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                          +A R     V  Y  +INGLCK   ++EA  L  EM  + + P++
Sbjct: 313 FLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDI 372

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TY+++I  LC   ++E ++ +  +M  +G  P+++S+T LL G    GR  +A +++ R
Sbjct: 373 VTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQR 432

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           ++ +G+  NV AY+ LI+ LC  G  DEA+ +  +ME+  C P+  T+  +I    +   
Sbjct: 433 LLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDE 492

Query: 321 LLGASQIWNRMISNG 335
              A +I   MI+ G
Sbjct: 493 NDKAEKILREMIARG 507



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 157/341 (46%), Gaps = 34/341 (9%)

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           +N M+     P    ++ ++  L +N      +S+  Q E N   P++ T S LI+ F  
Sbjct: 45  FNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCH 104

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
             ++  A  ++  ++  G  PN +    ++K LC      +A    +++  +    + V+
Sbjct: 105 QAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVS 164

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + T I GLC  G      +LL +++ +   P++  YN +++ L +   + +A ++ +E+ 
Sbjct: 165 YGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 224

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             GI  ++VTY T++HG C  G + EAF LL +M ++    +  TFNI+I A  K+GK+ 
Sbjct: 225 VKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMK 284

Query: 498 NAIQLL-------------------------DRIRGGGE---------WNPDIISYTSLL 523
            A  LL                         D ++               PD+  YT+++
Sbjct: 285 EAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMI 344

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            G+C +  + EA    ++M ++ + P+  T+N L+  L  N
Sbjct: 345 NGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 5/256 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +MK++ ++ +   F  +I++  + G  ++A  +   + +  +KP V  YN ++D   
Sbjct: 254 LLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYF 313

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +       ++ +M + G+ P+V  Y  ++  LCK   VD A  L  EM +K   PD V
Sbjct: 314 LVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIV 373

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +CK   +E A  L  R         V  Y  L++GLCK  ++E+A  +   +
Sbjct: 374 TYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL 433

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G   NV  Y+ +I+ LC  G  + +L +  +M  +GC P+  +F  +++        
Sbjct: 434 LAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDEN 493

Query: 252 HEASDLWNRMIREGFL 267
            +A  +   MI  G L
Sbjct: 494 DKAEKILREMIARGLL 509


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 207/368 (56%), Gaps = 14/368 (3%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGA---YKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           M  +GM+ N  T +I+L+ LC+  RV  A   +   +E+ +    PD VSYTT+++ +CK
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHA--QPDVVSYTTLINGLCK 58

Query: 148 LGQVEEARELAMRFGSG------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           LG+V+ A +L  +  +          YNAL++GLCK+ +++ A  ++ E   R   P+V+
Sbjct: 59  LGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVV 118

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+T++++L  +G V+ +L    QM   G  P + SF +++ G     R  +A +++N M
Sbjct: 119 TYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM 178

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           I   F PN+V YS +I GLC +  +DEA  +  +M    C P++  Y+ L+ GF+ AG L
Sbjct: 179 IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRL 238

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +  RM+S GC P+VV YT ++  LC+      AH +  ++    C PN VT++  
Sbjct: 239 DSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSAL 298

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C   RVD   K+   M++  C PN+ TYN ++ GL  V+R +EA+ +  E+ +CG 
Sbjct: 299 IGGYCRASRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGF 355

Query: 442 QLNIVTYN 449
             +  TY 
Sbjct: 356 VPDARTYR 363



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 193/372 (51%), Gaps = 10/372 (2%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDALLAEN 79
           M VEG+ C++     ++    R G   QAL+ F    E    +P V  Y  +++ L    
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 80  RFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           R      ++  M    G  PN FTYN L+  LCK +R+D A  ++ E   +  APD V+Y
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 139 TTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T+++++ +LG+V+EA     +     +   +  +NA+I GLC+  ++ +A  +  EM+D
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R   PN++TYS +I  LC    ++ +  +L +M   GC P++ ++T L+ G+   GR   
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L  RM+ +G +P+VV Y+ +I  LC  G +D+A  +  ++  N C PNV TYSALI 
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G+ +A  +    ++   M    C PNVV Y  M+  L   +   +A+ +  +M+     P
Sbjct: 301 GYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVP 357

Query: 374 NTVTFNTFIKGL 385
           +  T+    + L
Sbjct: 358 DARTYRGLKRAL 369



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 197/397 (49%), Gaps = 49/397 (12%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGID-----PNVITYSTIISSLCDVGNVETSLGILGQ 225
           ++ GLC+  ++ +A     E  D  ++     P+V++Y+T+I+ LC +G V+ +  +  +
Sbjct: 16  ILQGLCRCGRVAQAL----EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71

Query: 226 MFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           M   G C PN  ++ +L+ G     R   A  +     +  F P+VV Y+TL+  L   G
Sbjct: 72  MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA++   QM E    P + +++A+I G  +A  L  A +++N MI     PN+V Y+
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LC+++   +A  L+++M  E C P+ V +   + G    GR+D A+ LL +M   
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C+P++ TY  ++D L +V RV +A E+  E+       N+VTY+ ++ G CRA  V E 
Sbjct: 252 GCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEG 311

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +++ +M                   C+                     P++++Y +++W
Sbjct: 312 GKVMREMA------------------CR---------------------PNVVTYNTMIW 332

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G+      +EA+   ++M   G  P+  T+  L R+L
Sbjct: 333 GLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 153/281 (54%), Gaps = 5/281 (1%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           N  T S ++ G  + G +  A + ++  +      P+VV+YT ++  LC+      A  L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 363 IEKM-AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
             KM A   C PN  T+N  + GLC   R+D A  ++ + ++ +  P++ TYN L+  L 
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           ++ RV EA    T++ + G    +V++N I+ G+CRA  + +A ++  +M+      + +
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T++++I   CK  +++ A QLLDR+   G   PD+++YT L+ G   +G +  A   L++
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEG-CRPDLVAYTPLVLGFSAAGRLDSALGLLRR 247

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVY-ILDDIMANK 581
           M+++G  P+  T+ V++  L   +G +   + I  +++ANK
Sbjct: 248 MVSQGCIPDVVTYTVVIDKL-CKVGRVDDAHEIFRELVANK 287



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++  +D  + ++ + +    +     + +++ +  ++G  ++AL  F ++ E G
Sbjct: 88  LVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEG 147

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             PT+  +N I+  L    R +    +++ M      PN+ TY++++  LCK++++D A 
Sbjct: 148 YVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQ 207

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +LL  M ++GC PD V+YT +V      G+++ A  L  R  S      V  Y  +I+ L
Sbjct: 208 QLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKL 267

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A  +  E+V     PNV+TYS +I   C    V+    ++ +M    C PN+
Sbjct: 268 CKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNV 324

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            ++ +++ G  +  R  EA  ++  M   GF+P+   Y  L   L
Sbjct: 325 VTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNN 498
           G+Q N  T + IL G+CR G V +A +     L +   + D +++  +I   CK G+V+ 
Sbjct: 5   GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A  L  ++   G   P+  +Y +L+ G+C    +  A   + +       P+  T+N L+
Sbjct: 65  AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124

Query: 559 RSLFS 563
            +LF 
Sbjct: 125 AALFQ 129



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M +EG + +  T +II+   C+ G+V  A++  D         PD++SYT+L+ G+C  G
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 531 GMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
            +  AF   +KM+  G C PN  T+N LV  L
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGL 92


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 168/585 (28%), Positives = 282/585 (48%), Gaps = 55/585 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L E    D     L+++K  GVS     F  +I++Y ++GLAE+A++ F R++EF 
Sbjct: 98  VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFD 157

Query: 61  LKPTVKIYNHILDALLAENRFSMIN-PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            +P V  YN IL  ++ E+ F M+   +Y+ M +    PN++T+ IL+  L K  R   A
Sbjct: 158 CRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALING 174
            K+  +M  +G +P+ V+YT ++S +C+ G  E+AR+L     +  +      +NAL++G
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDG 277

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK  ++ EAF LL      G    +  YS++I  L        +  +   M  R   P+
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKRNIKPD 337

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I  +T L++G    G+  +A  L   M  +G  P+   Y+ +I  LC  G ++E  S+  
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQL 397

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M E    P+  T++ LI    + G +  A +I+  +  +GCSP+V  +  ++  LC++ 
Sbjct: 398 EMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSG 457

Query: 355 MFHQAHSLIEKM-------------------------------AFENCP--------PNT 375
              +A  L+ KM                               A++N          P+ 
Sbjct: 458 ELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDI 517

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V++N  I G C  G +D A+KLL+ ++     P+  TYN L++GL RV R +EAF+L   
Sbjct: 518 VSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF-- 575

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
             K   + +   Y +++   CR   ++ AF L  K L + + LD  T N I   + K+G+
Sbjct: 576 YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGE 634

Query: 496 VNNAIQL---LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
              A++    LD  +      P    YT  L G+C SG   EA +
Sbjct: 635 TERALRRLIELDTRKDELTLGP----YTIWLIGLCQSGRFHEALM 675



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/537 (24%), Positives = 247/537 (45%), Gaps = 62/537 (11%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           ++ +++  L ++N  D  ++ L E+ + G + D+  +  ++S+  K+G  E+A E   R 
Sbjct: 94  SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRM 153

Query: 162 GS-----GVSVYNALINGLCKEHKIEEAFWLLC-----EMVDRGIDPNVITYSTIISSLC 211
                   V  YN ++  + +E    + F++L      EM+     PN+ T+  ++  L 
Sbjct: 154 KEFDCRPDVFTYNVILRIMMRE----DVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLY 209

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G    +  +   M  RG +PN  ++T L+ G    G   +A  L+  M   G  P+ V
Sbjct: 210 KKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSV 269

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           A++ L+ G C  G M EA  +    E++     +  YS+LIDG  +A     A +++  M
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +     P+++ YT +++ L +      A  L+  M  +   P+T  +N  IK LCG G +
Sbjct: 330 LKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLL 389

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           +    L  +M + E  P+  T+  L+  + R   V++A E+  EIEK G   ++ T+N +
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNAL 449

Query: 452 LHGVCRAGMVVEAFQLLGKMLI-------------------------------------- 473
           + G+C++G + EA  LL KM +                                      
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFA 509

Query: 474 -EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   D +++N++I  +C++G ++ A++LL+ ++  G  +PD ++Y +L+ G+   G  
Sbjct: 510 DTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKG-LSPDSVTYNTLINGLHRVGRE 568

Query: 533 QEAF--IYLQKMLNE--GICPNFATWNVLVRSLFSN----LGHLGPVYILDDIMANK 581
           +EAF   Y +        +  +  TW+   R L       + +L  +  LDD  AN+
Sbjct: 569 EEAFKLFYAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANE 625



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 233/514 (45%), Gaps = 16/514 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K      Q +   M   G+S +   +  +I+   + G  E A K+FY ++  G
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASG 263

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    +N +LD      R      +    ++DG    +  Y+ L+  L +  R   A+
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           +L   M  +   PD + YT ++  + K G++E+A +L     S G++     YNA+I  L
Sbjct: 324 ELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKAL 383

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    +EE   L  EM +    P+  T++ +I S+C  G V  +  I  ++   GC+P++
Sbjct: 384 CGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSV 443

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI--REGFLPNVVAYS--TLIHGLCSNGSMDEAVS 291
            +F +L+ G    G   EA  L ++M   R   L   +A+S       +  +GS+ +A  
Sbjct: 444 ATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYK 503

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
                 +    P++ +Y+ LI+GF + G++ GA ++ N +   G SP+ V Y  ++  L 
Sbjct: 504 NLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLH 563

Query: 352 QNNMFHQAHSLI-EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL-LDQMKQYECLPN 409
           +     +A  L   K  F + P     + + +   C   ++  A  L +  +K+  CL +
Sbjct: 564 RVGREEEAFKLFYAKDDFRHSP---AVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDD 620

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             T NE ++   +    + A   + E++    +L +  Y   L G+C++G   EA  +  
Sbjct: 621 -ETANE-IEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFS 678

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +  +   +   +   +I+  CK+ +++ AI + 
Sbjct: 679 VLREKKILVTPPSCVKLIHGLCKREQLDAAIDVF 712


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 228/430 (53%), Gaps = 4/430 (0%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           + N  TYN L+   CK   ++ A++LL EM  +G +PD V++++IV ++C  G +  A +
Sbjct: 102 DTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQ 161

Query: 157 L---AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
               ++       ++N L++GLCK +++ EA  ++ EM +RGI P+V+TY+++I  LC  
Sbjct: 162 YFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKS 221

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             +E +  +L  M  R   PN+ ++ +L+ GY   G T  A  L  RMI+ G  P+VV +
Sbjct: 222 YRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTF 281

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++LI G C    +D+A  V + M++  C PN+ TY+ LI G   AG    A ++ + M  
Sbjct: 282 NSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG 341

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  P+++ Y  ++ + C+N    QA  +   M      P+ +++ T    L    R D 
Sbjct: 342 RGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDE 401

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A  LLD M     +PN+ T+N L++GL    R+ EA  L+  + + G      TY  ++ 
Sbjct: 402 AFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVT 461

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C+AG V +A ++L  M+ EG +    +   I++   ++GK + A+   D++       
Sbjct: 462 GLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKA 521

Query: 514 PDIISYTSLL 523
            D  SY  LL
Sbjct: 522 CD-PSYQKLL 530



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 237/484 (48%), Gaps = 38/484 (7%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLV-EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           N FT N LL+ L K  R   AY++   E+  + C  + ++Y                   
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITY------------------- 108

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                      N LI G CK   +E AF LL EM +RG  P+V+T+S+I+ +LC+ GN+ 
Sbjct: 109 -----------NTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLS 157

Query: 218 TSLGILGQMFVRG--CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
            ++    Q F     C P+   F  L+ G     +  EA  +   M   G +P+VV Y++
Sbjct: 158 RAM----QYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNS 213

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI GLC +  M+EA  +   M +    PN+ TY+ LI G+ K G    A Q+  RMI +G
Sbjct: 214 LIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSG 273

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+VV +  ++   CQ +   +A  ++  M    C PN VT+N  I GLC  GR + A 
Sbjct: 274 THPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEAC 333

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +LL +M     LP+I TYN L+    R  ++++AF++   + + G+  + ++Y T+   +
Sbjct: 334 ELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVAL 393

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            ++    EAF LL  M   G   +  TFN ++   C   +++ A  LL  +R  G  +P 
Sbjct: 394 LKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVG-CDPA 452

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
             +Y  L+ G+C +G + +A   L  M++EGI P  ++   +V +L         ++  D
Sbjct: 453 ASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFD 512

Query: 576 DIMA 579
            ++A
Sbjct: 513 QVVA 516



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 207/440 (47%), Gaps = 27/440 (6%)

Query: 3   EKLGEKCEIDGVQY------------------LLQQMKVEGVSCSEGVFISVINSYRRVG 44
           E LG+ C+ + + Y                  LL +MK  G S       S++ +    G
Sbjct: 95  ELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTG 154

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
              +A++ F    E    P   ++N ++  L   N+ S    +   M   G+ P+V TYN
Sbjct: 155 NLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYN 212

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GS 163
            L+  LCK+ R++ A +LL  M  +   P+ V+Y T++   CK G    A +L  R   S
Sbjct: 213 SLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQS 272

Query: 164 G----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGI-DPNVITYSTIISSLCDVGNVET 218
           G    V  +N+LI+G C++ KI++A  +L  ++ +G+  PN++TY+ +IS LCD G    
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVL-HLMKKGLCAPNLVTYNVLISGLCDAGRANE 331

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  +L +M  RG  P+I ++ SL+  +    +  +A  + N M+  G +P+ ++Y TL  
Sbjct: 332 ACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAV 391

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            L  +   DEA ++   M +    PN+ T+++L++G   +  L  A  +   M   GC P
Sbjct: 392 ALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDP 451

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
               Y  +V  LC+      A  ++  M  E   P   +  T +  L   G+ D A+   
Sbjct: 452 AASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYF 511

Query: 399 DQMKQYECLPNITTYNELLD 418
           DQ+   E      +Y +LL+
Sbjct: 512 DQVVAAESKACDPSYQKLLE 531



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 171/358 (47%), Gaps = 8/358 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  ++   + ++++M   G+      + S+I+   +    E+A ++   + +  
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  YN ++          + + +   M + G  P+V T+N L+   C+ +++D A 
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGL 175
           ++L  M    CAP+ V+Y  ++S +C  G+  EA EL     G G    +  YN+LI   
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIF 358

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  +IE+AF +   MV+RG+ P+ I+Y T+  +L      + +  +L  MF  G  PN+
Sbjct: 359 CRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNL 418

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F SL++G     R  EA  L   M R G  P    Y  L+ GLC  G +D+A  V   
Sbjct: 419 FTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVM 478

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI---SNGCSPNVVAYTCMVKVL 350
           M      P V++   ++   A+ G    A   +++++   S  C P+       VKVL
Sbjct: 479 MVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFVKVL 536


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/441 (32%), Positives = 225/441 (51%), Gaps = 38/441 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI +L    +    + +L++MK E    +E VF+++   Y RV     A+++F+++ +F 
Sbjct: 56  MIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQ 115

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR-VDGA 119
           +KPT K Y  + D L+ EN        Y  M+  G+ P V + NIL+KALCKN   V+ A
Sbjct: 116 VKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESA 175

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
           ++L  EM N+GC PD  SYT                            Y  LINGLCK  
Sbjct: 176 FRLFREMPNRGCQPD--SYT----------------------------YGTLINGLCKLG 205

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           KI +A  LL EM ++G+ P+V++Y+++I  LC   N++ ++ +L +M + G  PN+ +++
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL+ G    G + +A +L   M+R   LPN+V YSTLI+GLC  G   EAV +  +M   
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV-------LCQ 352
              P+   Y  +I G   A N   A+   + M   G SPN  ++T  VK+       LC 
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCN 385

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           N    +A  L   M          TF+  +K  C  G ++ A ++L++M    C+P+   
Sbjct: 386 NVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGM 445

Query: 413 YNELLDGLLRVNRVKEAFELV 433
           +N L+ GL    +V+E  EL+
Sbjct: 446 WNVLMCGLWDRKKVRETTELL 466



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 205/450 (45%), Gaps = 34/450 (7%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +     +  ++  L++ N+F     +   MK++  E     +  + +   + +R   A
Sbjct: 45  GFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDA 104

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALING 174
            ++  +M +    P   SY T+   + +   V+ A    +E+  +     V   N LI  
Sbjct: 105 IRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA 164

Query: 175 LCK-EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           LCK E  +E AF L  EM +RG  P+  TY T+I+ LC +G +  +  +L +M  +G +P
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ S+TSL+ G        EA +L   MI  G  PNV  YS+L+ GLC +G   +A+ + 
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL 284

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M      PN+ TYS LI+G  K G    A +I +RM   G  P+   Y  ++  LC  
Sbjct: 285 EVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAA 344

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
             + +A + I++MA     PN               R  W               ++  +
Sbjct: 345 CNYQEAANFIDEMALGGISPN---------------RASWTF-------------HVKMH 376

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N ++ GL        AF+L   +   GI + I T++ ++   C+ G + +A ++L +M++
Sbjct: 377 NMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMIL 436

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +G   D   +N+++     + KV    +LL
Sbjct: 437 DGCIPDEGMWNVLMCGLWDRKKVRETTELL 466



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 194/406 (47%), Gaps = 9/406 (2%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F    + + A+I+ L   ++   A  +L  M     +     + TI      V     ++
Sbjct: 46  FRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAI 105

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  +M      P   S+ ++    +       A   +  M  +G  P VV+ + LI  L
Sbjct: 106 RVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKAL 165

Query: 281 CSNG-SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           C N  +++ A  +  +M    C P+  TY  LI+G  K G +  A ++ + M   G SP+
Sbjct: 166 CKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPS 225

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           VV+YT ++  LCQ+N   +A  L+E+M      PN  T+++ + GLC  G    AM+LL+
Sbjct: 226 VVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLE 285

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            M +   LPN+ TY+ L++GL +  + +EA E++  +   G++ +   Y  I+ G+C A 
Sbjct: 286 VMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAAC 345

Query: 460 MVVEAFQLLGKMLIEGTKLD--AITFNIIIYAYCKQGKVNN-----AIQLLDRIRGGGEW 512
              EA   + +M + G   +  + TF++ ++    QG  NN     A QL   +R  G  
Sbjct: 346 NYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRG-I 404

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + +I ++  L+   C  G + +A   L++M+ +G  P+   WNVL+
Sbjct: 405 SVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLM 450



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 162/314 (51%), Gaps = 2/314 (0%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  +   +  +IH L S      A  +  +M++  C      +  +  G+ +    L A
Sbjct: 45  GFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDA 104

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++++M      P   +Y  +  +L + N   +A    ++M  +  PP  V+ N  IK 
Sbjct: 105 IRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKA 164

Query: 385 LCGCGR-VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           LC     V+ A +L  +M    C P+  TY  L++GL ++ ++ +A EL+ E+E+ G+  
Sbjct: 165 LCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSP 224

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++V+Y +++HG+C++  + EA +LL +M+I G + +  T++ ++   CK G  + A++LL
Sbjct: 225 SVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL 284

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + +       P++++Y++L+ G+C  G  +EA   L +M  +G+ P+   +  ++  L +
Sbjct: 285 E-VMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCA 343

Query: 564 NLGHLGPVYILDDI 577
              +      +D++
Sbjct: 344 ACNYQEAANFIDEM 357



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 3/250 (1%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           SNG   +   +  M+  L   N F  A  ++E+M  E+C      F T  +G     R  
Sbjct: 43  SNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPL 102

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+++  +M+ ++  P   +Y  + D L+  N VK A     E+ + GI   +V+ N ++
Sbjct: 103 DAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILI 162

Query: 453 HGVCRAGMVVE-AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
             +C+    VE AF+L  +M   G + D+ T+  +I   CK GK++ A +LLD +   G 
Sbjct: 163 KALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKG- 221

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
            +P ++SYTSL+ G+C S  + EA   L++M+  GI PN  T++ L+  L  + GH    
Sbjct: 222 LSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKS-GHSSQA 280

Query: 572 YILDDIMANK 581
             L ++M  +
Sbjct: 281 MELLEVMVRR 290



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 47/304 (15%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++    L ++M   G       + ++IN   ++G   QA ++   + E GL P+V  Y  
Sbjct: 172 VESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTS 231

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L   N       +   M  +G+EPNVFTY+ L+  LCK+     A +LL  M  + 
Sbjct: 232 LIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRR 291

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFG---------------SG----------- 164
             P+ V+Y+T+++ +CK G+  EA E+  R                 SG           
Sbjct: 292 LLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAA 351

Query: 165 ---------------------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
                                V ++N ++ GLC       AF L   M  RGI   + T+
Sbjct: 352 NFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTF 411

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
             ++   C  G++  +  IL +M + GC P+   +  L+ G     +  E ++L    ++
Sbjct: 412 DCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELK 471

Query: 264 EGFL 267
           + F+
Sbjct: 472 QKFV 475


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 223/409 (54%), Gaps = 3/409 (0%)

Query: 136 VSYTTIVSSICKLGQVEEARELA--MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           ++Y  +V+  C  GQ++ AR L   M        YN LI GLC   +   A  +L EM+ 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R   P+V+TY+ ++ + C     + ++ +L +M  +GC P+I ++  ++ G    GR  +
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A +    +   G  PN V+Y+ ++ GLC+    ++A  +  +M +  CPPNV T++ LI 
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
              + G +  A ++  ++   GC+PN ++Y  ++   C+     +A + ++ M    C P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + V++NT +  LC  G VD A++LL Q+K   C P + +YN ++DGL +  + KEA EL+
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E+   G+Q +I+TY+TI  G+CR   + +A +  GK+   G + + + +N II   CK+
Sbjct: 301 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 360

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
            + ++AI L   + G G   P+  +YT L+ G+   G ++EA   L ++
Sbjct: 361 RETHSAIDLFAYMIGNG-CMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/386 (33%), Positives = 205/386 (53%), Gaps = 5/386 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           + E  ++P    YN ++  L    R +    +   M R    P+V TY ILL+A CK + 
Sbjct: 23  VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 82

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNA 170
              A KLL EM +KGC PD V+Y  +V+ IC+ G+V++A E      S         YN 
Sbjct: 83  YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 142

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           ++ GLC   + E+A  L+ EM  +G  PNV+T++ +IS LC  G VE +L +L Q+   G
Sbjct: 143 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 202

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C PN  S+  LL  +    +  +A    + M+  G  P++V+Y+TL+  LC +G +D AV
Sbjct: 203 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 262

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            + +Q+++  C P + +Y+ +IDG  KAG    A ++ N M+S G  P+++ Y+ +   L
Sbjct: 263 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 322

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+ +    A     K+      PNTV +N  I GLC       A+ L   M    C+PN 
Sbjct: 323 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNE 382

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEI 436
           +TY  L++GL     +KEA +L+ E+
Sbjct: 383 STYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 208/395 (52%), Gaps = 4/395 (1%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YNA++ G C   +++ A  L+ EM    ++P+  TY+T+I  LC  G    +L +L +M
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             R C P++ ++T LL+         +A  L + M  +G  P++V Y+ +++G+C  G +
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D+A+     +    C PN  +Y+ ++ G   A     A ++   M   GC PNVV +  +
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+  +   A  ++E++    C PN++++N  +   C   ++D AM  LD M    C
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I +YN LL  L R   V  A EL+ +++  G    +++YNT++ G+ +AG   EA +
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL +M+ +G + D IT++ I    C++ ++ +AI+   +++  G   P+ + Y +++ G+
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG-IRPNTVLYNAIILGL 357

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C       A      M+  G  PN +T+ +L+  L
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 392



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 215/423 (50%), Gaps = 10/423 (2%)

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----R 155
             YN ++   C   ++D A +L+ EM  +   PDA +Y T++  +C  G+   A      
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            L  R    V  Y  L+   CK    ++A  LL EM D+G  P+++TY+ +++ +C  G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V+ ++  L  +   GC PN  S+  +LKG     R  +A +L   M ++G  PNVV ++ 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI  LC  G ++ A+ V  Q+ +  C PN  +Y+ L+  F K   +  A    + M+S G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C P++V+Y  ++  LC++     A  L+ ++  + C P  +++NT I GL   G+   A+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +LL++M      P+I TY+ +  GL R +R+++A     +++  GI+ N V YN I+ G+
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWN 513
           C+      A  L   M+  G   +  T+ I+I     +G +  A  LLD +  R G E  
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEIL 417

Query: 514 PDI 516
            D+
Sbjct: 418 LDV 420



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 197/361 (54%), Gaps = 4/361 (1%)

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + Y+ +++  C  G ++ +  ++ +M V    P+ +++ +L++G    GRT  A  + + 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+R   +P+VV Y+ L+   C      +A+ +  +M +  C P++ TY+ +++G  + G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A +    + S GC PN V+Y  ++K LC    +  A  L+ +M  + CPPN VTFN 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  G V+ A+++L+Q+ +Y C PN  +YN LL    +  ++ +A   +  +   G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              +IV+YNT+L  +CR+G V  A +LL ++  +G     I++N +I    K GK   A+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +LL+ +   G   PDII+Y+++  G+C    +++A     K+ + GI PN   +N ++  
Sbjct: 298 ELLNEMVSKG-LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 356

Query: 561 L 561
           L
Sbjct: 357 L 357



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 185/325 (56%), Gaps = 5/325 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           +QA+K+   +R+ G  P +  YN +++ +  E R         N+   G EPN  +YNI+
Sbjct: 84  KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 143

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS 163
           LK LC   R + A +L+ EMG KGC P+ V++  ++S +C+ G VE A E+     ++G 
Sbjct: 144 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 203

Query: 164 GVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             +   YN L++  CK+ K+++A   L  MV RG  P++++Y+T++++LC  G V+ ++ 
Sbjct: 204 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 263

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L Q+  +GC P + S+ +++ G    G+T EA +L N M+ +G  P+++ YST+  GLC
Sbjct: 264 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 323

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +++A+    ++++    PN   Y+A+I G  K      A  ++  MI NGC PN  
Sbjct: 324 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 383

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKM 366
            YT +++ L    +  +A  L++++
Sbjct: 384 TYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 130/255 (50%), Gaps = 5/255 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  + L+ +M  +G   +   F  +I+   R GL E AL++  +I ++G  P    YN +
Sbjct: 154 EDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPL 213

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L A   + +          M   G  P++ +YN LL ALC++  VD A +LL ++ +KGC
Sbjct: 214 LHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFW 186
           AP  +SY T++  + K G+ +EA EL     S      +  Y+ +  GLC+E +IE+A  
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
              ++ D GI PN + Y+ II  LC      +++ +   M   GC PN  ++T L++G  
Sbjct: 334 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 393

Query: 247 LGGRTHEASDLWNRM 261
             G   EA DL + +
Sbjct: 394 YEGLIKEARDLLDEL 408



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 72/148 (48%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D    LL Q+K +G +     + +VI+   + G  ++AL++   +   GL+P +  Y+
Sbjct: 257 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 316

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I   L  E+R       +  ++  G+ PN   YN ++  LCK      A  L   M   
Sbjct: 317 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 376

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL 157
           GC P+  +YT ++  +   G ++EAR+L
Sbjct: 377 GCMPNESTYTILIEGLAYEGLIKEARDL 404



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 4/97 (4%)

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           + +N ++  YC  G+++ A +L+  +       PD  +Y +L+ G+C  G    A   L 
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEM----PVEPDAYTYNTLIRGLCGRGRTANALAVLD 56

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +ML     P+  T+ +L+ +     G+   + +LD++
Sbjct: 57  EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/566 (26%), Positives = 265/566 (46%), Gaps = 35/566 (6%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+ L +F  + + G +P    Y   + A +          +  +M +DGM P+VF YN++
Sbjct: 139 EKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLV 198

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--- 163
           L  LCK  R+  A KL  EM  +   P+ V+Y T++   CK+G +EEA     R      
Sbjct: 199 LGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNV 258

Query: 164 --GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP----------------------- 198
              +  YN+L+NGLC   ++++A  +L EM   G  P                       
Sbjct: 259 ECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDG 318

Query: 199 -----NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
                +  TY  +++ LC VG +E +  +L ++   G  P+  S+  L+  Y   G   +
Sbjct: 319 KEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKK 378

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A     +M   G  PN + ++T+I   C  G +D A +   +M E    P V TY++LI+
Sbjct: 379 AILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLIN 438

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G+ + G+ +   +  + M   G  PNV++Y  ++  LC++     A  ++  M      P
Sbjct: 439 GYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSP 498

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N   +N  I+  C   ++  A +  D+M Q      + TYN L++GL R  RVK+A +L 
Sbjct: 499 NAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLF 558

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            ++   G   +++TYN+++ G  ++    +  +L  KM I G K    TF+ +IYA  K+
Sbjct: 559 LQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKE 618

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G V       + ++   +  PD   Y  +++     G + +A    Q+M+++G+  +  T
Sbjct: 619 GVVTMDKMFQEMLQ--MDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT 676

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMA 579
           +N L+ +   +       +++DD+ A
Sbjct: 677 YNSLILAYLRDRRVSEIKHLVDDMKA 702



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/578 (25%), Positives = 273/578 (47%), Gaps = 35/578 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++ M  +G+  S   +  V+    +V   + A K+F  + +  + P    YN ++D   
Sbjct: 179 LMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYC 238

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP--- 133
                         MK   +E N+ TYN LL  LC + RVD A ++L+EM   G  P   
Sbjct: 239 KVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGF 298

Query: 134 -------------------------DAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS- 166
                                    D  +Y  +++ +C++G++E+A E LA    +GV+ 
Sbjct: 299 LSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTP 358

Query: 167 ---VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               YN L+N  C+E  +++A     +M +RG++PN IT++T+IS  C+ G V+ +   +
Sbjct: 359 SKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWV 418

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M  +G +P + ++ SL+ GY   G      +  + M + G  PNV++Y +LI+ LC +
Sbjct: 419 RRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKD 478

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             + +A  V   M      PN   Y+ LI+       L  A + ++ MI +G    +V Y
Sbjct: 479 RKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTY 538

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  L +N    +A  L  +MA + C P+ +T+N+ I G          ++L D+MK 
Sbjct: 539 NTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKI 598

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P + T++ L+    R   V    ++  E+ +  +  +   YN +++     G V++
Sbjct: 599 LGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMK 657

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A  L  +M+ +G   D +T+N +I AY +  +V+    L+D ++  G   P + +Y  L+
Sbjct: 658 AMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKG-LVPKVDTYNILI 716

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C+      A+ + ++M+  G+  N +    L+  L
Sbjct: 717 KGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGL 754



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/549 (24%), Positives = 256/549 (46%), Gaps = 35/549 (6%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           + ++A  ++  +R+ G  P+ +  N +L  L+    F     +++++   G  P+   Y 
Sbjct: 102 MLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYG 161

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AM 159
             ++A      +D  ++L+  M   G  P   +Y  ++  +CK+ ++++AR+L       
Sbjct: 162 KAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQR 221

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   YN LI+G CK   IEEA      M ++ ++ N++TY+++++ LC  G V+ +
Sbjct: 222 NMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDA 281

Query: 220 LGILGQMFVRGCNP--------NIHS--------------------FTSLLKGYLLGGRT 251
             +L +M   G  P        + HS                    +  LL G    GR 
Sbjct: 282 REVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRI 341

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A ++  +++  G  P+ ++Y+ L++  C  G + +A+  + QMEE    PN  T++ +
Sbjct: 342 EKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTV 401

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I  F + G +  A     RM+  G SP V  Y  ++    Q   F +    +++M     
Sbjct: 402 ISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGI 461

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN +++ + I  LC   ++  A  +L  M      PN   YN L++    ++++K+AF 
Sbjct: 462 KPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFR 521

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
              E+ + GI   +VTYNT+++G+ R G V +A  L  +M  +G   D IT+N +I  Y 
Sbjct: 522 FFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYA 581

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K       ++L D+++  G   P + ++  L++  C   G+       Q+ML   + P+ 
Sbjct: 582 KSVNTQKCLELYDKMKILG-IKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQ 639

Query: 552 ATWNVLVRS 560
             +N ++ S
Sbjct: 640 FVYNEMIYS 648



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 209/452 (46%), Gaps = 13/452 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D  + +L +M  EG     G F+S +      G  +  L     IR        + Y 
Sbjct: 277 RVDDAREVLLEM--EGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIR-----IDERTYC 329

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L+ L    R      + + +  +G+ P+  +YNIL+ A C+   V  A     +M  +
Sbjct: 330 ILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
           G  P+ +++ T++S  C+ G+V+ A     R         V  YN+LING  ++      
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F  L EM   GI PNVI+Y ++I+ LC    +  +  +L  M  RG +PN   +  L++ 
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  +A   ++ MI+ G    +V Y+TLI+GL  NG + +A  +  QM    C P+
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY++LI G+AK+ N     +++++M   G  P V  +  ++   C+         + +
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQ 628

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M   +  P+   +N  I      G V  AM L  QM       +  TYN L+   LR  
Sbjct: 629 EMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDR 688

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           RV E   LV +++  G+   + TYN ++ G+C
Sbjct: 689 RVSEIKHLVDDMKAKGLVPKVDTYNILIKGLC 720



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 211/439 (48%), Gaps = 10/439 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            I+  + +L ++   GV+ S+  +  ++N+Y + G  ++A+    ++ E GL+P    +N
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFN 399

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++                  M   G+ P V TYN L+    +       ++ L EM   
Sbjct: 400 TVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKA 459

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEA 184
           G  P+ +SY ++++ +CK  ++ +A   LA   G GVS    +YN LI   C   K+++A
Sbjct: 460 GIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDA 519

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F    EM+  GID  ++TY+T+I+ L   G V+ +  +  QM  +GCNP++ ++ SL+ G
Sbjct: 520 FRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISG 579

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG--SMDEAVSVSYQMEENSCP 302
           Y     T +  +L+++M   G  P V  +  LI+     G  +MD+      QM+     
Sbjct: 580 YAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMD---LV 636

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+   Y+ +I  +A+ GN++ A  +  +M+  G   + V Y  ++    ++    +   L
Sbjct: 637 PDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHL 696

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           ++ M  +   P   T+N  IKGLC     + A     +M +   L N++   +L+ GL  
Sbjct: 697 VDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLRE 756

Query: 423 VNRVKEAFELVTEIEKCGI 441
              ++EA  + +E+   G+
Sbjct: 757 EGMLREAQIVSSELSIGGL 775



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/415 (23%), Positives = 190/415 (45%), Gaps = 30/415 (7%)

Query: 175 LCKEHK-IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           LC   K ++EA  L   M   G  P+  + + ++ +L D  + E +L +   +   G  P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  ++   ++  ++     +  +L   M+++G  P+V AY+ ++ GLC    + +A  + 
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M + +  PN  TY+ LIDG+ K G +  A     RM       N+V Y  ++  LC +
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275

Query: 354 NMFHQAHSLIEKMAFENCPP----------------------------NTVTFNTFIKGL 385
                A  ++ +M      P                            +  T+   + GL
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  GR++ A ++L ++ +    P+  +YN L++   +   VK+A     ++E+ G++ N 
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNR 395

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +T+NT++   C  G V  A   + +M+ +G      T+N +I  Y ++G      + LD 
Sbjct: 396 ITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDE 455

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +   G   P++ISY SL+  +C    + +A I L  M+  G+ PN   +N+L+ +
Sbjct: 456 MDKAG-IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 151/318 (47%), Gaps = 31/318 (9%)

Query: 280 LCSNGSM-DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           LCS   M DEA  +   M ++   P+  + + L+     + +      ++  +I +G  P
Sbjct: 96  LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           + VAY   V+         +   L++ M  +   P+   +N  + GLC   R+  A KL 
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D+M Q   +PN  TYN L+DG  +V  ++EA      +++  ++ N+VTYN++L+G+C +
Sbjct: 216 DEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGS 275

Query: 459 GMVVEAFQLLGKM--------------------------LIEGT--KLDAITFNIIIYAY 490
           G V +A ++L +M                          L +G   ++D  T+ I++   
Sbjct: 276 GRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGL 335

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C+ G++  A ++L ++   G   P  ISY  L+   C  G +++A +  ++M   G+ PN
Sbjct: 336 CRVGRIEKAEEVLAKLVENG-VTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPN 394

Query: 551 FATWNVLVRSLFSNLGHL 568
             T+N ++ S F   G +
Sbjct: 395 RITFNTVI-SKFCETGEV 411



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 168/365 (46%), Gaps = 6/365 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I K  E  E+D  +  +++M  +GVS +   + S+IN Y + G   +  +    + + G
Sbjct: 401 VISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAG 460

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  Y  +++ L  + +      + ++M   G+ PN   YN+L++A C  +++  A+
Sbjct: 461 IKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAF 520

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGL 175
           +   EM   G     V+Y T+++ + + G+V++A +L ++  G G    V  YN+LI+G 
Sbjct: 521 RFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGY 580

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K    ++   L  +M   GI P V T+  +I + C    V T   +  +M      P+ 
Sbjct: 581 AKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQ 639

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +  ++  Y   G   +A  L  +M+ +G   + V Y++LI     +  + E   +   
Sbjct: 640 FVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDD 699

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+     P V TY+ LI G     +  GA   +  M+  G   NV     ++  L +  M
Sbjct: 700 MKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGM 759

Query: 356 FHQAH 360
             +A 
Sbjct: 760 LREAQ 764



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 115/237 (48%), Gaps = 6/237 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG    +   + L  QM  +G +     + S+I+ Y +    ++ L+++ +++  G
Sbjct: 541 LINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILG 600

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KPTV  ++ ++ A   E   +M + ++  M +  + P+ F YN ++ +  ++  V  A 
Sbjct: 601 IKPTVGTFHPLIYACRKEGVVTM-DKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAM 659

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L  +M ++G   D V+Y +++ +  +  +V E + L     A      V  YN LI GL
Sbjct: 660 SLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGL 719

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           C       A++   EMV+RG+  NV     +IS L + G +  +  +  ++ + G N
Sbjct: 720 CDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGLN 776


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 276/560 (49%), Gaps = 15/560 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF-GLKPTVKIYNHIL 72
           ++ +L+ MK + +  +   F ++I +Y   G  ++AL++F+ +RE     PTV   N +L
Sbjct: 110 IELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLL 169

Query: 73  DALLAENRFSMINPIYSNMKR--DGMEPNV--FTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + L+   +  +   +Y  M +  DG    V  +T +I++K LC   +++   +L+ +   
Sbjct: 170 NGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWG 229

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEE 183
           KGC P  V Y  I+   CK G ++ A    +EL M+     V  Y ALING CK  + E 
Sbjct: 230 KGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEA 289

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              LL EM  RG++ NV  ++ +I +    G V  +   + +M   GC P+I ++ +++ 
Sbjct: 290 VDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMIN 349

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
               GGR  EA +   +    G LPN  +Y+ L+H  C  G   +A  + +++ E    P
Sbjct: 350 FSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKP 409

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ +Y A I G    G +  A  +  +M+  G  P+   Y  ++  LC+N  F     L+
Sbjct: 410 DLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLL 469

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M   N  P+   F T + G    G +D A+K+   + +    P I  YN ++ G  + 
Sbjct: 470 SEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKF 529

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            ++ +A   + +++      +  TY+T++ G  +   +  A ++ G+M+    K + IT+
Sbjct: 530 GKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITY 589

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQK 541
             +I  +CK+  +  A ++    RG   ++  P++++YT+L+ G   +G  ++A    + 
Sbjct: 590 TSLINGFCKKADMIRAEKVF---RGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFEL 646

Query: 542 MLNEGICPNFATWNVLVRSL 561
           ML  G  PN AT++ L+  L
Sbjct: 647 MLMNGCPPNDATFHYLINGL 666



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 265/550 (48%), Gaps = 26/550 (4%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L+++K++GV  +   + ++IN + + G  E   ++   +   GL   VK++N+++D   A
Sbjct: 259 LKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVID---A 315

Query: 78  ENRFSMINPIYSNMKR---DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           E ++ ++      M+R    G  P++ TYN ++   CK  R+  A + L +   +G  P+
Sbjct: 316 EFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPN 375

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLC 189
             SYT ++ + CK G   +A  +  R         +  Y A I+G+    +I+ A  +  
Sbjct: 376 KFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVRE 435

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M+++G+ P+   Y+ ++S LC  G       +L +M  R   P+++ F +L+ G++  G
Sbjct: 436 KMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNG 495

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              EA  ++  +IR+G  P +V Y+ +I G C  G M +A+S   +M+     P+  TYS
Sbjct: 496 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYS 555

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +IDG+ K  ++  A +++ +M+ +   PNV+ YT ++   C+     +A  +   M   
Sbjct: 556 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSF 615

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV------ 423
           +  PN VT+ T + G    G+ + A  + + M    C PN  T++ L++GL         
Sbjct: 616 DLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVL 675

Query: 424 --------NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
                   N      +  T +   G    I  YN+++  +C+ GMV  A  LL KML +G
Sbjct: 676 IEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKG 735

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
             +D++ F  +++  C +GK      ++       E     + Y+  L      G + EA
Sbjct: 736 FLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQT-AVKYSLTLDKYLYQGRLSEA 794

Query: 536 FIYLQKMLNE 545
            + LQ ++ E
Sbjct: 795 SVILQTLIEE 804



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 206/442 (46%), Gaps = 20/442 (4%)

Query: 141 IVSSICK--LGQVEEARELAMRFGSGVSV-----------YNALINGLCKEHKIEEAFWL 187
           +VS +    + +V +A ELA++F    S            +++L+  L       E   +
Sbjct: 55  VVSDVAHFVIDRVHDA-ELALKFFDWASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELV 113

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYL 246
           L  M  + + P    +S +I +  + G+++ +L +   +  +  C P + +  SLL G +
Sbjct: 114 LENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLV 173

Query: 247 LGGRTHEASDLWNRMIRE----GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             G+   A  L+++M++     G + +    S ++ GLC+ G ++E   +        C 
Sbjct: 174 KSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCV 233

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V  Y+ +IDG+ K G+L  A++    +   G  P V  Y  ++   C+   F     L
Sbjct: 234 PHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQL 293

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +MA      N   FN  I      G V  A + + +M +  C P+ITTYN +++   +
Sbjct: 294 LTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCK 353

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R+KEA E + + ++ G+  N  +Y  ++H  C+ G  V+A  +L ++   G K D ++
Sbjct: 354 GGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVS 413

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +   I+     G+++ A+ + +++   G + PD   Y  L+ G+C +G      + L +M
Sbjct: 414 YGAFIHGVVVHGEIDVALMVREKMMEKGVF-PDAQIYNVLMSGLCKNGRFPAMKLLLSEM 472

Query: 543 LNEGICPNFATWNVLVRSLFSN 564
           L+  + P+   +  L+     N
Sbjct: 473 LDRNVQPDVYVFATLMDGFIRN 494



 Score = 39.7 bits (91), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 7/131 (5%)

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           L+ V ++++L  +    +  E   +L  M  +  K     F+ +I AY + G ++ A+QL
Sbjct: 89  LDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQL 148

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE-----GICPNFATWNVL 557
              +R      P +++  SLL G+  SG +  A     KML        +  N+ T +++
Sbjct: 149 FHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTT-SIV 207

Query: 558 VRSLFSNLGHL 568
           V+ L  NLG +
Sbjct: 208 VKGL-CNLGKI 217


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 264/534 (49%), Gaps = 7/534 (1%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           ++S R +   E AL  F+++      P  K +  +   ++    ++    +  ++   G+
Sbjct: 43  LDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGI 102

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +P+V+T  I++  LC  N     + +L  M   G  P  V++ T+++ +C  G V  A  
Sbjct: 103 KPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAAR 162

Query: 157 LA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV-ITYSTIISSL 210
            A     M   S    Y A+INGLCK      A   L ++  R  D +V I YSTI+ SL
Sbjct: 163 FADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSL 222

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G V  +L +   M  +G  P++ ++ SL+ G    GR  EA+ L   M+R+G +PNV
Sbjct: 223 CKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNV 282

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             ++ L+   C +G +  A ++   M      P+V TY+++I G      +  A +++  
Sbjct: 283 QTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFEL 342

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           MI  G  PN+V Y+ ++   C+    ++A  L+ +M      P+ VT++T I G C  G+
Sbjct: 343 MIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGK 402

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            + A +L   M +++  PN+ T   +LDGL +     EA  L  E+EK  ++LN+V YN 
Sbjct: 403 PEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNI 462

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L G+C  G + +A +L   +  +G K+D + +  +I   CK+G +++A  LL ++   G
Sbjct: 463 VLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENG 522

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              P+  +Y   + G+     +  +  YL  M  +G+  +  T  +L+    +N
Sbjct: 523 CL-PNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSAN 575



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 173/339 (51%), Gaps = 8/339 (2%)

Query: 22  KVEGVSCSEGVFI---SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           K++G +C   V I   ++++S  + G+  +AL +F  +   G++P +  YN ++  L   
Sbjct: 201 KIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNF 260

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            R+     +  NM R G+ PNV T+N+L+   CK+  +  A  ++  M + G  PD V+Y
Sbjct: 261 GRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTY 320

Query: 139 TTIVSSICKLGQVEEA---RELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            +++S  C L Q+ +A    EL +   F   +  Y++LI+G CK   I +A +LL EMV+
Sbjct: 321 NSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVN 380

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
            G++P+V+T+ST+I   C  G  E +  +   M     +PN+ +   +L G        E
Sbjct: 381 SGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSE 440

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L+  M +     NVV Y+ ++ G+CS G +++A  +   +       +V  Y+ +I 
Sbjct: 441 AISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIK 500

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
           G  K G L  A  +  +M  NGC PN   Y   V+ L Q
Sbjct: 501 GLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQ 539



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 115/256 (44%), Gaps = 2/256 (0%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N T  +  +D      +   A   +++M+     P    +T +  ++ +   +    SLI
Sbjct: 35  NFTNRAQFLDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLI 94

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           + +      P+  T    I  LC      +   +L  M +    P + T+  L++GL   
Sbjct: 95  KHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAE 154

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD-AIT 482
             V  A      +E  G Q N  TY  I++G+C+AG    A   L K+      LD  I 
Sbjct: 155 GNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIA 214

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           ++ I+ + CK G V  A+ L   +   G   PD+++Y SL+ G+CN G  +EA   L  M
Sbjct: 215 YSTIMDSLCKDGMVCEALNLFSGMTSKG-IQPDLVAYNSLIHGLCNFGRWKEATTLLGNM 273

Query: 543 LNEGICPNFATWNVLV 558
           + +GI PN  T+NVLV
Sbjct: 274 MRKGIMPNVQTFNVLV 289



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 8/224 (3%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+   +LL +M   G++     + ++I  + + G  E A ++F  + E    P ++    
Sbjct: 368 INKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAI 427

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ILD L      S    ++  M++  +E NV  YNI+L  +C   +++ A +L   + +KG
Sbjct: 428 ILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKG 487

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
              D V+YTT++  +CK G +++A  L M+      +     YN  + GL + + I  + 
Sbjct: 488 IKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRST 547

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS-LGILGQMFV 228
             L  M  +G+  +  T   +IS      N E S L +  Q FV
Sbjct: 548 KYLLLMKGKGLSADATTTELLISYFS--ANKENSALHVFLQEFV 589


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/525 (30%), Positives = 253/525 (48%), Gaps = 9/525 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L  F  +   G+ P V+  N +L  L    R+  +  +Y  M +  +EP + TYN LL +
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 110 LCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV 165
             K  R D A  LL EM  +G   + + V++  ++S + + G +E A +L  +MR     
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKA 306

Query: 166 S--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           S   YN LI  L +   + +A  L  EM + GI P V+TY+ II  L      E +    
Sbjct: 307 SSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKF 366

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P++ ++ SLL  Y   G   EA  L   + R G  P V+ Y+TLI G C  
Sbjct: 367 AEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 426

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G + EA  +  +M E  C P+V TY+ L++G  K  NL  A + ++ M+S G  P+  AY
Sbjct: 427 GDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAY 486

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +      +    A  L E M  +   P+TVT+N  I GLC  G +  A +L  +M  
Sbjct: 487 NTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVS 546

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY  L+        ++EA +L+  +   G+Q ++VTY  ++H  CR G +  
Sbjct: 547 DGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYS 606

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A+    KML  G + + IT+N++I+A C  G+   A +    +   G   P+  +YT L+
Sbjct: 607 AYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG-LAPNKYTYTLLI 665

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G C  G   +A     +M   GI P++ T N L +    + GH+
Sbjct: 666 DGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF--DEGHM 708



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 177/390 (45%), Gaps = 5/390 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E+  +   + L  +M+ EG+  +   + ++I+   +   AE A   F  +R  G
Sbjct: 314 LITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMG 373

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  YN +L+             +  +++R G+ P V TYN L+   C+   +  A 
Sbjct: 374 LLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEAR 433

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           +L  EM  +GC PD  +YT +++   K+  +  ARE     L+         YN  I   
Sbjct: 434 RLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAE 493

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                   AF L   M+ +GI P+ +TY+ II  LC  GN++ +  +  +M   G  P+ 
Sbjct: 494 LTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDC 553

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T L+  +   G   EA  L N M+ +G  P+VV Y+ L+H  C  G++  A     +
Sbjct: 554 ITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRK 613

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    PN  TY+ LI      G    A + ++ M+  G +PN   YT ++   C+   
Sbjct: 614 MLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGN 673

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +  A  L  +M     PP+  T N   KG 
Sbjct: 674 WADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 168/356 (47%), Gaps = 6/356 (1%)

Query: 8   KCE-IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           KCE  +  Q    +M+  G+      + S++N Y + G  ++AL +   +R  GL PTV 
Sbjct: 355 KCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVL 414

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN ++D        +    +   M   G  P+V TY IL+    K   +  A +   EM
Sbjct: 415 TYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEM 474

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKI 181
            +KG  PD  +Y T + +   L     A   RE+ M  G       YN +I+GLCK   +
Sbjct: 475 LSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNL 534

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++A  L  +MV  G+ P+ ITY+ +I + C+ G +  +  +L  M   G  P++ ++T L
Sbjct: 535 KDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTIL 594

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +      G  + A   + +M+  G  PN + Y+ LIH LC  G    A    ++M E   
Sbjct: 595 VHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGL 654

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
            PN  TY+ LIDG  + GN   A +++  M  NG  P+   +  + K   + +M+H
Sbjct: 655 APNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEGHMYH 710


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 260/539 (48%), Gaps = 10/539 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V   ++ ++   G   +A  M   +R  GL   V+  N +L   L    F     ++  M
Sbjct: 113 VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 172

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G+ P+  ++  L+   C+  +V+    LL  M   G + D  + T +V S+C+ G+ 
Sbjct: 173 TRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 232

Query: 152 EEARELAMRF---GSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++  E   R    G+  +V  Y A I+GLCK   +++AF +L EMV RG+ PNV T++T+
Sbjct: 233 KDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 292

Query: 207 ISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I  LC +G  E +  +  ++       PN+H++T ++ GY   G+   A  L  RM+ +G
Sbjct: 293 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 352

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN   Y+TLI G C  GS D A  +  +M++    PN+ TY+A+IDGF K G +  A 
Sbjct: 353 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 412

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++     S G   + + YT ++   C+      A  L ++M    C P+   + + I   
Sbjct: 413 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 472

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   +++ + K  D+      LP   TY  ++ G  +V R   A  +   + + G   + 
Sbjct: 473 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 532

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TY  ++ G+C+   + EA  L   ML +      +T   + + YC++ K + A+ +LDR
Sbjct: 533 ITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDR 592

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +    +    + +   ++  +   G +  A ++L+K+L+E    + AT+   + S + N
Sbjct: 593 L----DKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYEN 647



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 192/422 (45%), Gaps = 12/422 (2%)

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           Y T  ++    G +  A E          V   ++    +  ++ EA  ++ EM   G+ 
Sbjct: 94  YVTAATAFVARGSLPMAHE----------VMRGMVAAFGEAGRLPEAADMVLEMRSHGLP 143

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
             V T + ++    + G+   +  +   M   G  P+  SF +L+      G+  E   L
Sbjct: 144 LCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDAL 203

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              M R GF  +    + ++  LC  G   +      +M E   PPNV  Y+A IDG  K
Sbjct: 204 LAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCK 263

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC-PPNTV 376
              +  A  +   M+  G  PNV  +T ++  LC+     +A  L  K+   +   PN  
Sbjct: 264 RRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVH 323

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+   I G C  G++  A  LL +M +    PN  TY  L+ G  +      AFEL+ ++
Sbjct: 324 TYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 383

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           ++ G   NI TYN ++ G C+ G + EA+++L     +G K D IT+ I+I  +CKQG +
Sbjct: 384 KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHI 443

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
             A+ L DR+   G   PDI +YTSL+   C    M+E+  +  K L  G+ P   T+  
Sbjct: 444 TYALDLFDRMVENG-CCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTS 502

Query: 557 LV 558
           ++
Sbjct: 503 MI 504



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 176/404 (43%), Gaps = 38/404 (9%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFG 60
           I+ L ++  +    ++L++M   G+  +     ++I+   ++G  E+A ++F + I+   
Sbjct: 258 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 317

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  Y  ++     E + +    +   M   G++PN  TY  L+   CK    D A+
Sbjct: 318 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 377

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGL 175
           +L+ +M  +G  P+  +Y  ++   CK G+++EA + L M    G+      Y  LI   
Sbjct: 378 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEH 437

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+  I  A  L   MV+ G  P++  Y+++IS+ C    +E S     +  + G  P  
Sbjct: 438 CKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTK 497

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++TS++ GY   GR+  A  ++ RM++ G   + + Y  LI GLC    ++EA ++   
Sbjct: 498 QTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEG 557

Query: 296 MEENSCPP--------------------------------NVTTYSALIDGFAKAGNLLG 323
           M +    P                                 V T   ++   +  G++  
Sbjct: 558 MLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDA 617

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           AS    +++    + +   YT  +    +NN +  A  + EK +
Sbjct: 618 ASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALASEMSEKFS 661


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/574 (27%), Positives = 279/574 (48%), Gaps = 6/574 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ KL ++ ++  V    ++M    V      F  +IN     G  ++A  +  ++ E G
Sbjct: 139 LLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESG 198

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+V  YN +L+    + R+     +   M   G+E +  TYN+L+  LCKNNR    Y
Sbjct: 199 YVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGY 258

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGL 175
            LL +M  +  +P+ ++Y +I++   K G++  A    +E++M         YNALI+G 
Sbjct: 259 LLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGH 318

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C +   E+A  +L  M   G  PN ++YS +++ LC     E S  IL +M + G     
Sbjct: 319 CHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGC 378

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+++ G    G  +E+  L ++M+++G +P+VV +S LI+G C  G +     +  +
Sbjct: 379 IAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICK 438

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    PN   Y+ LI  + K G+++ A +++  M   G   N      +V  LC++  
Sbjct: 439 MYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGK 498

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A      M+     PN++TF+  I G    G    A  + D+M +    P+  TY  
Sbjct: 499 VGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGG 558

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           LL  L R  + KEA  L+ ++      ++ VTYNTIL    ++GM+ +A  L  +M+   
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRN 618

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D+ T+ II     ++GK+  A+     + G G  +P+ + YT+ + G+  +G  + A
Sbjct: 619 VLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAA 678

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             + + M   G+C +    NV++   +S +G + 
Sbjct: 679 LYFCEDMEKNGLCADLIATNVILNG-YSRMGKMA 711



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 255/548 (46%), Gaps = 6/548 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ QM  +G+      +  +++   +   + +   +  ++R+  + P    YN I++  +
Sbjct: 225 LIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFV 284

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      I+  M    + PN  TYN L+   C +   + A  +L  M   G  P+ V
Sbjct: 285 KEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEV 344

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY+ +++ +C+  + E ++ +  R        G   Y A+I+GLC+   + E+  LL +M
Sbjct: 345 SYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKM 404

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +  G+ P+V+T+S +I+  C VG ++    I+ +M+  G  PN   +T+L+  Y   G  
Sbjct: 405 LKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDV 464

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  ++  M R G+  N    + L+  LC +G +  A    + M +    PN  T+  +
Sbjct: 465 VEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCI 524

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G+  +GN L A  +++ MI  G  P+   Y  ++K LC+   F +A  L++K+ +   
Sbjct: 525 INGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPS 584

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +TVT+NT +      G +  A+ L D+M Q   LP+  TY  +  GL+R  ++  A  
Sbjct: 585 AVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALH 644

Query: 432 LVTEI-EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
               +  K  +    V Y T + G+ RAG    A      M   G   D I  N+I+  Y
Sbjct: 645 FYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGY 704

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            + GK+  A  +   +  G   +P + +Y  LL G      + +       M+  GI P+
Sbjct: 705 SRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPD 764

Query: 551 FATWNVLV 558
             T + L+
Sbjct: 765 KLTCHSLI 772



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 240/469 (51%), Gaps = 8/469 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           P+VF  ++L++   +   V  A +    MG +G  P   +   ++  + K  +V      
Sbjct: 98  PSVF--DLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155

Query: 155 --RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
               LA R    VS +N LIN LC E K+++A +LL +M + G  P+V+TY+T+++  C 
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  + +L ++ QM  +G   +  ++  L+       R+ +   L  +M +    PN + 
Sbjct: 216 KGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEIT 275

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+++I+G    G +  A  +  +M   +  PN  TY+ALIDG    GN   A  I   M 
Sbjct: 276 YNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMME 335

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           + G  PN V+Y+ ++  LC++  F  + S++E+M         + +   I GLC  G ++
Sbjct: 336 ATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLN 395

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            ++KLLD+M +   +P++ T++ L++G  RV ++K   E++ ++ K G+  N + Y T++
Sbjct: 396 ESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLI 455

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +  C+ G VVEAF++   M   G   +    N+++ + CK GKV  A      +   G  
Sbjct: 456 YNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNV 515

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            P+ I++  ++ G  NSG   +AF    +M+  G  P+  T+  L+++L
Sbjct: 516 -PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 235/492 (47%), Gaps = 7/492 (1%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+V+T N+LL  L K  +V   +    EM  +   PD  ++  +++ +C  G++++A
Sbjct: 128 GFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKA 187

Query: 155 RELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L  +     +   V  YN ++N  CK+ + + A  L+ +M  +GI+ +  TY+ ++  
Sbjct: 188 GYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDD 247

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC          +L +M  R  +PN  ++ S++ G++  G+   A+ ++  M     LPN
Sbjct: 248 LCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPN 307

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            V Y+ LI G C +G+ ++A+++   ME     PN  +YSAL++G  +      +  I  
Sbjct: 308 CVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILE 367

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM  NG     +AYT M+  LC+N + +++  L++KM  +   P+ VTF+  I G C  G
Sbjct: 368 RMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVG 427

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++    +++ +M +    PN   Y  L+    +   V EAF++   + + G   N    N
Sbjct: 428 KIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICN 487

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++  +C+ G V  A      M   G   ++ITF+ II  Y   G    A  + D +   
Sbjct: 488 VLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKA 547

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G  +P   +Y  LL  +C +G  +EA   L K+       +  T+N ++   F + G L 
Sbjct: 548 GH-HPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKS-GMLT 605

Query: 570 PVYILDDIMANK 581
               L D M  +
Sbjct: 606 DAVALFDEMVQR 617



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 133/597 (22%), Positives = 270/597 (45%), Gaps = 43/597 (7%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +I  V+ ++ +M   G++ +  ++ ++I +Y + G   +A K++  +   G      I N
Sbjct: 428  KIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICN 487

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++ +L  + +  +    + +M + G  PN  T++ ++     +     A+ +  EM   
Sbjct: 488  VLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKA 547

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
            G  P   +Y  ++ ++C+ G+ +EA+ L  +            YN ++    K   + +A
Sbjct: 548  GHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDA 607

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLK 243
              L  EMV R + P+  TY+ I + L   G +  +L   G +  +G  +P    +T+ + 
Sbjct: 608  VALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVD 667

Query: 244  GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCP 302
            G    G++  A      M + G   +++A + +++G    G M +A  +   M    +  
Sbjct: 668  GLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITIS 727

Query: 303  PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            P++ TY+ L+ G+AK  NL   S ++N M+  G  P+ +    ++   C++ M      L
Sbjct: 728  PSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKL 787

Query: 363  IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            ++KM  +    +  TFN  I   C    V  A  L++ M  ++  P++TT++ ++  L R
Sbjct: 788  LKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSR 847

Query: 423  VNRVKE-----------------------------------AFELVTEIEKCGIQLNIVT 447
            V+ V+E                                   AF+L  E+E  GI    V 
Sbjct: 848  VSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVA 907

Query: 448  YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
             + ++ G+ + G V EA  +L  ML +       TF  +++ +C+   +  A++L D + 
Sbjct: 908  ESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTM- 966

Query: 508  GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
               +   D+I+Y  L+ G+C  G +  A    +++   G+ PN  T+ +L+ ++F+N
Sbjct: 967  DFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTN 1023



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 194/399 (48%), Gaps = 1/399 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           S  SV++ LI    +E  + +A      M  RG +P+V T + ++  L     V      
Sbjct: 96  SNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLF 155

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M  R   P++ +F  L+    + G+  +A  L  +M   G++P+VV Y+T+++  C 
Sbjct: 156 FKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCK 215

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G    A+ +  QM       +  TY+ L+D   K         +  +M     SPN + 
Sbjct: 216 KGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEIT 275

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++    +      A  + ++M+  N  PN VT+N  I G C  G  + A+ +L+ M+
Sbjct: 276 YNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMME 335

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                PN  +Y+ LL+GL R  + + +  ++  +   G+ +  + Y  ++ G+CR G++ 
Sbjct: 336 ATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLN 395

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           E+ +LL KML +G   D +TF+++I  +C+ GK+ N  +++ ++   G   P+ I YT+L
Sbjct: 396 ESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG-LAPNSIIYTTL 454

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++  C +G + EAF     M   G   N    NVLV SL
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSL 493



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/555 (22%), Positives = 245/555 (44%), Gaps = 9/555 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  L +  ++   +Y    M   G   +   F  +IN Y   G   +A  MF  + + G
Sbjct: 489  LVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAG 548

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P+   Y  +L AL    +F     +   +       +  TYN +L    K+  +  A 
Sbjct: 549  HHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAV 608

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS-----VYNALING 174
             L  EM  +   PD+ +Y  I + + + G++  A        G G       +Y   ++G
Sbjct: 609  ALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDG 668

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNP 233
            L +  + + A +   +M   G+  ++I  + I++    +G +  +  I   M+     +P
Sbjct: 669  LFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISP 728

Query: 234  NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
            ++ ++  LL GY       + S+L+N M+R G  P+ +   +LI G C +  +D  + + 
Sbjct: 729  SLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLL 788

Query: 294  YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             +M  +    +  T++ LI  + +   +  A  + N M      P++  +  ++ VL + 
Sbjct: 789  KKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRV 848

Query: 354  NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
            +   ++H L+ +M    C P+   +   +  +C  G +  A KL D+M+           
Sbjct: 849  STVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAE 908

Query: 414  NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
            + L+ GL +  +V+EA  ++  + +  +   I T+ T++H  CR   +VEA +L   M  
Sbjct: 909  SALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDF 968

Query: 474  EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI-CNSGGM 532
               KLD I +N++I   C  G V +A++L   I+  G W P++ +Y  L+  I  N   +
Sbjct: 969  CDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLW-PNMTTYCILIDAIFTNDISL 1027

Query: 533  QEAFIYLQKMLNEGI 547
             +  + L+ +   G+
Sbjct: 1028 AKGEVLLKDLQERGV 1042



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 128/263 (48%), Gaps = 5/263 (1%)

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC--MVKVLCQNNMFHQ 358
           C  N + +  LI  + + G +  A + +  M   G +P+V  YTC  ++  L +      
Sbjct: 94  CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSV--YTCNMLLGKLVKERKVGA 151

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
                ++M      P+  TFN  I  LC  G++  A  LL +M++   +P++ TYN +L+
Sbjct: 152 VWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLN 211

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
              +  R K A EL+ ++   GI+ +  TYN ++  +C+     + + LL KM       
Sbjct: 212 WYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISP 271

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           + IT+N II  + K+GK+  A ++   +       P+ ++Y +L+ G C+ G  ++A   
Sbjct: 272 NEITYNSIINGFVKEGKIGAATRIFQEM-SMLNLLPNCVTYNALIDGHCHDGNFEQALTI 330

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
           L+ M   G  PN  +++ L+  L
Sbjct: 331 LEMMEATGPKPNEVSYSALLNGL 353


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/424 (32%), Positives = 220/424 (51%), Gaps = 10/424 (2%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
            Y+ ++++L K   +  A ++   M ++ C P  V+Y  +++S C  G+  +A +L  +M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 160 RFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           +    V      YN LI+GLC     E A  LL EM D+ I  NV TYS+II SL     
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
            E S  +L +M   GCNP++ +F  +++G+       +A +++  M+  G+ P+ V+Y  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCP--PNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           LIHGL   G +DE++ +  +M   +    PNV T+S LI G  + G L  A +++  M+ 
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            GC PN   YT ++  LC+     QA  L EKM     PP+ V +N+ I G C  G +D 
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 394 AMKLLDQMKQYECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           A KL  +M     L P I T+N L+DG  ++ ++  A ELV E+   G+  +  TY  ++
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+ RA  + EA ++  +M  +   LD ++    +   CK G ++ A  + +  R  G  
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431

Query: 513 -NPD 515
            NP+
Sbjct: 432 PNPE 435



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 224/426 (52%), Gaps = 9/426 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDAL 75
           + + MK E    S   +  +INS    G   +AL +F  + RE  ++P    YN ++  L
Sbjct: 32  VFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGL 91

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
            +         + S M+   +  NVFTY+ ++K+L K  + + +YK+L EM   GC PD 
Sbjct: 92  CSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDV 151

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
            ++  ++    +   +E+ARE+      SG       Y+ LI+GL K  K++E+  +L E
Sbjct: 152 FAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSE 211

Query: 191 MVDR--GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
           M  R  G  PNVIT+ST+I  LC  G +E +L + G M   GC PN +++T+L+ G    
Sbjct: 212 MAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRA 271

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS-CPPNVTT 307
            +  +A +L+ +M +    P+ VAY++LI G C  GSMDEA  +  +M   +   P + T
Sbjct: 272 EKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVT 331

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ LIDGF K G L  A+++   M + G + +   Y  ++  L +     +A  + ++M 
Sbjct: 332 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMR 391

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +    + V+  +F+ GLC  G +D A  + +  ++   +PN  T+  L + L+++ RV+
Sbjct: 392 EKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 451

Query: 428 EAFELV 433
           +A +L+
Sbjct: 452 DAQKLM 457



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 225/445 (50%), Gaps = 10/445 (2%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS---VYNALINGLCKEHK 180
           M    CA    +Y  +V S+ K G + +A E+   M+  S V     YN LIN  C   +
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 181 IEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
             +A  L   M  ++ ++P+  TY+T+IS LC  GN E +  +L +M  +    N+ +++
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           S++K  +   +  E+  +   M+  G  P+V A++ ++ G   + +M++A  V   M E+
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI--SNGCSPNVVAYTCMVKVLCQNNMFH 357
              P+  +Y  LI G AK G L  + +I + M   + G  PNV+ ++ ++  LC+     
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  +   M    C PN  T+ T I GLC   +V  A +L ++M Q    P+   YN L+
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300

Query: 418 DGLLRVNRVKEAFELVTEIEK-CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
            G  +   + EA +L  E+    G+Q  IVT+NT++ G C+ G +  A +L+ +M  +G 
Sbjct: 301 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 360

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D  T+ I+I    +  K++ A+++  ++R   ++  D +S  S + G+C +G + +A+
Sbjct: 361 AADTCTYRILIAGLSRATKLDEALEVYKQMREK-KFLLDPVSCVSFVGGLCKTGNIDQAY 419

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
              +     G  PN  T+ +L  SL
Sbjct: 420 AVFEATRKSGAVPNPETFRILSESL 444



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 179/394 (45%), Gaps = 33/394 (8%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +G + LL +M+ + ++ +   + S+I S  +    E++ K+   +   G  P V  +N +
Sbjct: 98  EGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGV 157

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-- 129
           +      N       +Y +M   G +P+  +Y+IL+  L K  ++D + K+L EM  +  
Sbjct: 158 MQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAA 217

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  P+ ++++T++  +C+ G++E+A E+   FGS                          
Sbjct: 218 GYVPNVITFSTLIHGLCRTGELEKALEV---FGS-------------------------- 248

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M++ G  PN  TY+T+I+ LC    V  +  +  +M      P+  ++ SL+ GY   G
Sbjct: 249 -MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRG 307

Query: 250 RTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
              EA  L+  M    G  P +V ++TLI G C  G +  A  +  +M       +  TY
Sbjct: 308 SMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTY 367

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             LI G ++A  L  A +++ +M       + V+    V  LC+     QA+++ E    
Sbjct: 368 RILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRK 427

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
               PN  TF    + L   GRV+ A KL++  K
Sbjct: 428 SGAVPNPETFRILSESLIKLGRVEDAQKLMEPAK 461



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 73/142 (51%), Gaps = 2/142 (1%)

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           KC I  +   Y+ ++  + +AGM+ +A ++   M  E      +T+N++I + C  G+  
Sbjct: 5   KCAIGGD--AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFG 62

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+ L   ++      PD  +Y +L+ G+C+SG  + A   L +M ++ I  N  T++ +
Sbjct: 63  KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122

Query: 558 VRSLFSNLGHLGPVYILDDIMA 579
           ++SL           +L+++MA
Sbjct: 123 IKSLVKEAKPEESYKVLEEMMA 144


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 232/423 (54%), Gaps = 6/423 (1%)

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD ++ TT +   C  GQ+ +A     + +AM F      Y  LINGLCK  + + A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL     + + P+V+ Y+TII  +C   +V  +  +  +   +   P++ ++ +L+ G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           + + G+  +A DL+N+M  +  +P+V  +S L+ G C +G++ EA +V   M + S  P+
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TYS+L+DG+     +  A  I+N M   G + NV +Y  M+   C+  M  +A  L +
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   P+ +T+++ I GLC  GR+ +A++L+D+M      P+I TYN +LD L + +
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V +A  L+T+++  GI+ ++ TY  ++ G+C++G + +A ++   +L++G  LD   + 
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 617

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           ++I  +C +G  + A+ LL ++   G   PD  +Y  ++  +        A   L++M+ 
Sbjct: 618 VMIQGFCDKGLFDEALALLSKMEENG-CIPDAKTYEIIILSLFEKDENDMAEKLLREMIM 676

Query: 545 EGI 547
            G+
Sbjct: 677 RGL 679



 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 209/396 (52%), Gaps = 1/396 (0%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
              I G C + +I +A     +++  G   + ++Y T+I+ LC VG  + +L +L +   
Sbjct: 267 TTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDG 326

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +   P++  + +++ G       ++A DL++  + +   P+V  Y+ LI G C  G + +
Sbjct: 327 KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKD 386

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ +  +M   +  P+V T+S L+DGF K GN+  A  +   M+     P+VV Y+ ++ 
Sbjct: 387 AIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C  N  ++A S+   M+      N  ++N  I G C    VD AMKL  +M   +  P
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ TY+ L+DGL +  R+  A ELV E+   G Q +I+TYN+IL  +C+   V +A  LL
Sbjct: 507 DVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLL 566

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            K+  +G + D  T+ I++   C+ GK+ +A ++ + +   G +N D+ +YT ++ G C+
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG-YNLDVYAYTVMIQGFCD 625

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            G   EA   L KM   G  P+  T+ +++ SLF  
Sbjct: 626 KGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 661



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 222/416 (53%), Gaps = 5/416 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           ++G EP+  T    +K  C   ++  A     ++   G   D VSY T+++ +CK+G+ +
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315

Query: 153 EARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A EL  R         V +YN +I+G+CK+  + +AF L  E V + I P+V TY+ +I
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           S  C VG ++ ++ +  +M  +   P++++F+ L+ G+   G   EA ++   M+++   
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+VV YS+L+ G C    +++A S+   M       NV +Y+ +I+GF K   +  A ++
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M      P+V+ Y+ ++  LC++     A  L+++M +    P+ +T+N+ +  LC 
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
              VD A+ LL ++K     P++ TY  L+ GL +  ++++A ++  ++   G  L++  
Sbjct: 556 KHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYA 615

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           Y  ++ G C  G+  EA  LL KM   G   DA T+ III +  ++ + + A +LL
Sbjct: 616 YTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLL 671



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 195/372 (52%), Gaps = 5/372 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN   +VG  + AL++  R     ++P V +YN I+D +  +   +    +YS     
Sbjct: 303 TLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSK 362

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + P+VFTYN L+   C   ++  A  L  +M +K   PD  +++ +V   CK G ++EA
Sbjct: 363 RIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEA 422

Query: 155 RE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +  LAM     +      Y++L++G C  +++ +A  +   M  RG+  NV +Y+ +I+ 
Sbjct: 423 KNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMING 482

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C +  V+ ++ +  +M  +   P++ +++SL+ G    GR   A +L + M   G  P+
Sbjct: 483 FCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPD 542

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           ++ Y++++  LC    +D+A+++  +++     P++ TY+ L+ G  ++G L  A +++ 
Sbjct: 543 IITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFE 602

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            ++  G + +V AYT M++  C   +F +A +L+ KM    C P+  T+   I  L    
Sbjct: 603 DLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKD 662

Query: 390 RVDWAMKLLDQM 401
             D A KLL +M
Sbjct: 663 ENDMAEKLLREM 674



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/477 (22%), Positives = 204/477 (42%), Gaps = 84/477 (17%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ-- 225
           +  ++  L K         L  +M  +GI  N +  + +I+S C +G +  +  +L +  
Sbjct: 113 FGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSVLTRGV 172

Query: 226 ---MFVRGC--NPNIHSFTSL--------------LKGYLLGG----------------- 249
                ++ C    N+  F  L              LK +L                    
Sbjct: 173 YWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHKT 232

Query: 250 --------RTHEASDLWN--RMIREGFLPNVVAYSTLIHGLCSNGSM-------DEAVSV 292
                   ++ E S  +   ++++ G+ P+ +  +T I G C  G +       D+ +++
Sbjct: 233 FIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAM 292

Query: 293 SYQMEENS----------------------------CPPNVTTYSALIDGFAKAGNLLGA 324
            + +++ S                              P+V  Y+ +IDG  K  ++  A
Sbjct: 293 GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA 352

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             +++  +S    P+V  Y  ++   C       A  L  KM  +N  P+  TF+  + G
Sbjct: 353 FDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDG 412

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G +  A  +L  M +    P++ TY+ L+DG   VN V +A  +   +   G+  N
Sbjct: 413 FCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 472

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           + +YN +++G C+  MV EA +L  +M  +    D IT++ +I   CK G+++ A++L+D
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD 532

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +   G+  PDII+Y S+L  +C    + +A   L K+  +GI P+  T+ +LV+ L
Sbjct: 533 EMHYRGQ-QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 148/285 (51%), Gaps = 5/285 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  + +      F  +++ + + G  ++A  +   + +  +KP V  Y+ ++D   
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYC 449

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N  +    I++ M   G+  NV +YNI++   CK   VD A KL  EM +K   PD +
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509

Query: 137 SYTTIVSSICKLGQVEEARELA--MRF---GSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++  +CK G++  A EL   M +      +  YN++++ LCK+H +++A  LL ++
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +GI P++ TY+ ++  LC  G +E +  +   + V+G N +++++T +++G+   G  
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
            EA  L ++M   G +P+   Y  +I  L      D A  +  +M
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + +   M   GV+ +   +  +IN + ++ + ++A+K+F  +    + P V  Y+
Sbjct: 453 EVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYS 512

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M   G +P++ TYN +L ALCK + VD A  LL ++  +
Sbjct: 513 SLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQ 572

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +YT +V  +C+ G++E+AR+     L   +   V  Y  +I G C +   +EA
Sbjct: 573 GIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEA 632

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             LL +M + G  P+  TY  II SL +    + +  +L +M +RG
Sbjct: 633 LALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I   + +L  M  + +      + S+++ Y  V    +A  +F  +   G+   V+ YN 
Sbjct: 419 IKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNI 478

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++             ++  M    + P+V TY+ L+  LCK+ R+  A +L+ EM  +G
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGLCKEHKIEEAF 185
             PD ++Y +I+ ++CK   V++A  L  +  G G+    + Y  L+ GLC+  K+E+A 
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +  +++ +G + +V  Y+ +I   CD G  + +L +L +M   GC P+  ++  ++   
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658

Query: 246 LLGGRTHEASDLWNRMIREGFL 267
                   A  L   MI  G L
Sbjct: 659 FEKDENDMAEKLLREMIMRGLL 680



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 40/204 (19%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L ++M  + +      + S+I+   + G    AL++   +   G +P +  YN 
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK--------- 121
           ILDAL  ++       + + +K  G+ P++ TY IL+K LC++ +++ A K         
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 122 --------------------------LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
                                     LL +M   GC PDA +Y  I+ S+ +  + + A 
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668

Query: 155 ---RELAMRFGSGVSVYNALINGL 175
              RE+ MR G  V++ + L+  +
Sbjct: 669 KLLREMIMR-GLLVALTDDLVASI 691



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 60/130 (46%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K  +D    LL ++K +G+      +  ++    + G  E A K+F  +   G
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  ++     +  F     + S M+ +G  P+  TY I++ +L + +  D A 
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAE 668

Query: 121 KLLVEMGNKG 130
           KLL EM  +G
Sbjct: 669 KLLREMIMRG 678


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 146/514 (28%), Positives = 257/514 (50%), Gaps = 19/514 (3%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGME--PNVFTYNILLKALCKNNRVDGAYK--- 121
           I N ++D L  + R      +   M +   E  PN  T +I+  AL K ++V  A     
Sbjct: 194 IRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEE 253

Query: 122 ---LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSVY--NALIN 173
              L+ +       P+++  T ++S +C+ G+ + A ++    M+ G  +     NAL+ 
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLT 313

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN- 232
            L +  + +    LL EM +  I PNV+T+  +I+ LC    V+ +L +  +M     N 
Sbjct: 314 ALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNG 373

Query: 233 ----PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMD 287
               P++ ++ +L+ G    GR  E   L  RM  +   +PN V Y+ LI G C    ++
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIE 433

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A  +  QM ++  PPNV T + L+DG  K G + GA + +N M   G   N V YT ++
Sbjct: 434 AARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALI 493

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +  C  N   +A  L ++M    C P+ + + T I GL   G++D A  +L +MK+    
Sbjct: 494 RAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFS 553

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+I ++N L++G  R N++ EA+E++ E+E  GI+ + VTYNT++    + G    A +L
Sbjct: 554 PDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRL 613

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           + KM+ EG     +T+  +I+AYC  G ++ A+++   +    +  P+ + Y  L+  +C
Sbjct: 614 MKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLC 673

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               +  A   +  M  +G+ PN  T+N + + L
Sbjct: 674 RKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL 707



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 250/515 (48%), Gaps = 17/515 (3%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           +K+G   + + +  L+ +     V  +      +I+   R G  ++A  + + + + G  
Sbjct: 243 DKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGV 302

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
                 N +L AL     F  +N + + MK   ++PNV T+ IL+  LCK  RVD A ++
Sbjct: 303 MEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEV 362

Query: 123 LVEMGNKG------CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNA 170
             +M N G        PD ++Y T++  +CK+G+ EE   L  R  S          YN 
Sbjct: 363 FEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNC 421

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI+G CK   IE A  L  +M   G+ PNV+T +T++  +C  G +  ++    +M  +G
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
              N  ++T+L++ +       +A +L++ M+  G  P+ + Y TLI GL   G +D A 
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            V  +M+E    P++ +++ LI+GF +   L  A ++   M + G  P+ V Y  ++   
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL-PN 409
            +   F  AH L++KM  E   P  VT+   I   C  G +D AMK+   M     + PN
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPN 661

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              YN L++ L R N+V  A  L+ +++  G++ N  T+N +  G+     + +AF+L+ 
Sbjct: 662 TVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMD 721

Query: 470 KMLIEGTKLDAITFNII---IYAYCKQGKVNNAIQ 501
           +M       D IT  I+   + A  +  K+ + +Q
Sbjct: 722 RMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 249/538 (46%), Gaps = 21/538 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQM---KVEGVSCSEG--VFISVINSYRRVGLA---EQALKM 52
           +I+ L  K  +D   +LL +M   K E    S    +  S ++   +VG A   E+ + +
Sbjct: 198 LIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGL 257

Query: 53  FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
             +  E  + P       ++  L    R      +   + + G      + N LL AL +
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS------ 166
                    LL EM      P+ V++  +++ +CK  +V+EA E+  +   G S      
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377

Query: 167 ----VYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLG 221
                YN LI+GLCK  + EE   L+  M  +    PN +TY+ +I   C    +E +  
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  QM   G  PN+ +  +L+ G    GR + A + +N M  +G   N V Y+ LI   C
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           +  ++++A+ +  +M E  C P+   Y  LI G ++AG L  AS + ++M   G SP++V
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           ++  ++   C+ N   +A+ ++++M      P+ VT+NT I      G    A +L+ +M
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRAGM 460
            +   +P + TY  L+        + EA ++  ++     +  N V YN +++ +CR   
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQ 677

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           V  A  L+  M ++G K +  TFN +     ++  ++ A +L+DR+      NPD I+
Sbjct: 678 VDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA-CNPDYIT 734



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 142/290 (48%), Gaps = 6/290 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ + +   I+G      +M+ +G+  +   + ++I ++  V   E+A+++F  + E G
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG 516

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P   +Y  ++  L    +    + + S MK  G  P++ ++N+L+   C+ N++D AY
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAY 576

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           ++L EM N G  PD V+Y T++S   K G    A  L  +         V  Y ALI+  
Sbjct: 577 EMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAY 636

Query: 176 CKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           C    ++EA  +  +M     + PN + Y+ +I+SLC    V+ +L ++  M V+G  PN
Sbjct: 637 CLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPN 696

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            ++F ++ KG        +A +L +RM      P+ +    L   L + G
Sbjct: 697 TNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 279/559 (49%), Gaps = 7/559 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M+  G    +  F SV++   + G  E+AL +   +   G K +V +   ++    
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        I+    RDG+ P   TY +L++   +    + AY+L  +M + G  P   
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 137 SYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            +  ++  +      ++A    +E+A         YN LI+ LC+  KI EA  L  +M 
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMN 413

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           + G+ P ++TY +++   C  G ++ ++ +  +M  +G  PN+ ++T+L+KG++      
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  L   M + G   N   Y+TLI+GLC  G + E   +  + E     P   TY+++I
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           +GF KAG +  A  ++ +M + G  PN+V YT  +   C+ +    A  ++  +  +   
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLR 593

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+   +N+ I G C  G +  A+++L  M +   LPNI+ YN  + G   +  ++EA  L
Sbjct: 594 PDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRL 653

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++ K GI L+  TY T++ G  + G V  A +L  +M+ +G   D ITF  + +  C+
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            G +++A +LLD +    +  P+++ Y  L+ G   +G +QEAF    +ML   I P+  
Sbjct: 714 NGDIDDARKLLDEM-NRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDT 772

Query: 553 TWNVLVRSLFSNLGHLGPV 571
           T+++LV     +LG   P+
Sbjct: 773 TYDILVG--MKSLGSDSPI 789



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 256/507 (50%), Gaps = 8/507 (1%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           +++ ++ A   E  +     ++  M    +EP+    ++ + +LCK    + A  +L +M
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGVSVYNA--LINGLCKEHKI 181
            + G  P   ++ ++V  + K G++EEA   ++  +  G  +SV  A  L++G C + ++
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            +A  +  E +  G+ P  +TY+ +I    + G  E +  +  QM   G  P+ + F  +
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +KG L      +A  L+  M   G +P+   Y+ LIH LC    + EA+++  +M E   
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P + TY +L+  +   G +  A +++  M   G +PNVV YT ++K       F +A++
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+ +M       N  T+NT I GLC  GRV    ++L + +    +P   TYN +++G +
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +  AF +  ++   GI  NIVTY + + G C+      A ++L  +  +G + D  
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +N +I+ +C++G +++A+Q+L  +   G   P+I  Y S + G  N   M+EA    +K
Sbjct: 598 AYNSLIFGFCQEGNMSHALQVLVLMLKDGLL-PNISVYNSFITGYKNLKMMEEALRLYEK 656

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHL 568
           M+ EGI  + AT+  L+   FS  G++
Sbjct: 657 MIKEGIDLDTATYTTLIDG-FSKDGNV 682



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 214/507 (42%), Gaps = 75/507 (14%)

Query: 126 MGNKGCAPDAVSYTTIVS-----------------------------------SICKLGQ 150
           M  +G  PDA S T +++                                   +  K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            ++A  L     A        V +  I  LCK      A  +L +M D G  P   T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  L   G +E +L I  ++   G   ++   T+L+ GY L     +A D++   +R+G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE--------------------------- 298
            +P  V Y+ LI G    G  ++A  +  QM +                           
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 299 -------NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
                  +S  P+  TY+ LI    +   +  A  +W +M   G  P +V Y  ++   C
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
            N    +A  L  +M  +   PN VT+ T +KG       D A  LL +MKQ     N  
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L++GL  V RV E  E++   E  G     +TYN+I++G  +AGM+  AF +  +M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
             +G   + +T+   I  YCK    + A+++L+ +R  G   PDI +Y SL++G C  G 
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG-LRPDIAAYNSLIFGFCQEGN 611

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLV 558
           M  A   L  ML +G+ PN + +N  +
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFI 638



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 203/417 (48%), Gaps = 30/417 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ +I     L ++M   GV      + S++  Y   G  ++A+K++  +   G
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++   + +  F     + + MK++G+  N +TYN L+  LC   RV    
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG 511

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++L     +G  P A++Y                              N++ING  K   
Sbjct: 512 EMLKRFETEGFVPTAMTY------------------------------NSIINGFIKAGM 541

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF +  +M  +GI PN++TY++ I   C     + +L +L  +  +G  P+I ++ S
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G+   G    A  +   M+++G LPN+  Y++ I G  +   M+EA+ +  +M +  
Sbjct: 602 LIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEG 661

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              +  TY+ LIDGF+K GN+  A ++++ M++ G  P+ + +T +   LC+N     A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            L+++M   +  PN + +N  I G    G++  A +L D+M + + +P+ TTY+ L+
Sbjct: 722 KLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 2/371 (0%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M  RG+ P+  + + +++      +   +L +L +M  +G   +   F  +++     G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A  L++ M      P+    S  I  LC     + A+ V  +M++    P   T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++D   K G +  A  I + +++ G   +VV  T ++   C      +A  + E+   + 
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P  VT+   I+G    G  + A +L  QM+ +  LP+   +N ++ GLL     K+A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L  E+   GI  +  TYN ++H +C+   + EA  L  KM   G K   +T++ ++  Y
Sbjct: 373 SLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C  G ++ A++L   + G G + P++++YT+L+ G  N     +A+  L +M   G+  N
Sbjct: 432 CVNGCMDEAVKLYTEMPGKG-FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 551 FATWNVLVRSL 561
             T+N L+  L
Sbjct: 491 DYTYNTLINGL 501



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M  +G  LDA  F++++ A  K+G  ++A++L D +    E  PD    +  +  +C  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEM-PASEIEPDQRVCSVAIASLCKL 225

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
                A + L+KM + G  P   T+N +V  L         ++I D+++A 
Sbjct: 226 RDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLAT 276


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 236/476 (49%), Gaps = 25/476 (5%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQV 151
           + G+  N  ++  +L+ LC   R   A  +++    K GC PD  SYT ++  +C   + 
Sbjct: 41  KTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKC 100

Query: 152 EEARELAMRFGSG-------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           EEA +L              V  Y  +I+G  KE ++ +A+ L CEM+DRGI P+V+T +
Sbjct: 101 EEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCN 160

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +II  LC V  ++ +  +L QMF +   P+  ++ SL+ GYL  G+  EA  +  +M R 
Sbjct: 161 SIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRH 220

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  PN V YS LI  LC  G   EA  +   M ++   PNV TY  L+ G+A  G+L+  
Sbjct: 221 GQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEM 280

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           + + + M+ NG  P+   +   +    +     +A     KM  +   P+ +++ T I G
Sbjct: 281 NNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDG 340

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC  GR+D AM    QM      P+I  +  L+ G     + ++A EL  E+   GI+  
Sbjct: 341 LCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPT 400

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +V + T++  + + G V EA  L   M I   K + +++N II+ Y   GK++  ++LLD
Sbjct: 401 VVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLD 460

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +   G   P+ +++ +L                L  ML+ G+ P+ AT N L+ S
Sbjct: 461 DMLSVG-LKPNAVTFNTL----------------LDDMLSMGLKPDVATCNTLIDS 499



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 236/484 (48%), Gaps = 12/484 (2%)

Query: 91  MKRDG---MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           M R G   + P   TY IL+   C    ++ A+  L ++   G   +A+S+T I+ ++C 
Sbjct: 1   MARAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCA 60

Query: 148 LGQVEEARELAMRFGS------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRG--IDPN 199
             +  +A  + +R+         V  Y  L+ GLC E K EEA  L+  M + G    PN
Sbjct: 61  EKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPN 120

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V++Y+T+I        V  +  +  +M  RG  P++ +  S++ G        +A ++  
Sbjct: 121 VVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLR 180

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
           +M  +  +P+   Y++L+HG  S+G + EAV +  QM  +  PPN  TYS LID   K G
Sbjct: 181 QMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFG 240

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A +I N MI +  +PNV  Y  ++          + ++LI+ M      P+   FN
Sbjct: 241 GHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFN 300

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I     CGR+D AM   ++M+Q   +P+I +Y  ++DGL ++ R+  A     ++   
Sbjct: 301 IQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDD 360

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G+  +IV +  ++HG    G   +A +L  +M+  G +   + F  +I    K+GKV  A
Sbjct: 361 GLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEA 420

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             L D +       P+++SY +++ G   +G + E    L  ML+ G+ PN  T+N L+ 
Sbjct: 421 KTLFD-LMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD 479

Query: 560 SLFS 563
            + S
Sbjct: 480 DMLS 483



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 217/471 (46%), Gaps = 58/471 (12%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG--MEPNVFTYNILLKALCKNNR 115
           + G  P V  Y  +L  L  E +      +   M  DG    PNV +Y  ++    K + 
Sbjct: 77  KLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDE 136

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGV----SVYNA 170
           V  AY L  EM ++G  PD V+  +I+  +CK+  +++A E L   F   +    + YN+
Sbjct: 137 VGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNS 196

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L++G     +++EA  +L +M   G  PN +TYS +I  LC  G    +  IL  M    
Sbjct: 197 LVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSR 256

Query: 231 CNPNIHSFTSLLKGYLLGG-----------------------------------RTHEAS 255
            NPN+ ++  LL GY   G                                   R  EA 
Sbjct: 257 GNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAM 316

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
             +N+M ++G +P++++Y T+I GLC  G +D A+S   QM ++   P++  ++ LI GF
Sbjct: 317 LTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGF 376

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
           +  G    A +++  M+  G  P VV +T M+  L +     +A +L + M   +  PN 
Sbjct: 377 SMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNV 436

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V++N  I G    G++D  +KLLD M      PN  T+N LLD +L +            
Sbjct: 437 VSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSM------------ 484

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
               G++ ++ T NT++   C  G + +   L  +ML +  K D +T NII
Sbjct: 485 ----GLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/376 (30%), Positives = 198/376 (52%), Gaps = 5/376 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           + + P  +TY+ +IS  C VG +  +   LGQ+   G   N  SFT +L+      RT +
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 254 ASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSA 310
           A ++  R   + G  P+V +Y+ L+ GLC     +EAV + + M E+   CPPNV +Y+ 
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I GF K   +  A  ++  M+  G  P+VV    ++  LC+     +A  ++ +M  ++
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+  T+N+ + G    G++  A+++L QM ++   PN  TY+ L+D L +     EA 
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAR 246

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           E++  + +     N+ TY  +LHG    G +VE   L+  M+  G + D   FNI IYAY
Sbjct: 247 EILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAY 306

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K G+++ A+   +++R  G   PDIISY +++ G+C  G +  A     +M+++G+ P+
Sbjct: 307 VKCGRLDEAMLTFNKMRQQG-LMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPD 365

Query: 551 FATWNVLVRSLFSNLG 566
              +  L+   FS  G
Sbjct: 366 IVVFTNLIHG-FSMYG 380



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 201/450 (44%), Gaps = 60/450 (13%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           +KCE + V  L+  M  +G  C   V  + +VI+ + +     +A  +F  + + G+ P 
Sbjct: 98  KKCE-EAVD-LIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPD 155

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V   N I+D L           +   M    + P+  TYN L+     + ++  A ++L 
Sbjct: 156 VVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILK 215

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALI------- 172
           +M   G  P+ V+Y+ ++  +CK G   EARE     +  R    V+ Y  L+       
Sbjct: 216 QMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKG 275

Query: 173 --------------NGLCKEH--------------KIEEAFWLLCEMVDRGIDPNVITYS 204
                         NG+  +H              +++EA     +M  +G+ P++I+Y 
Sbjct: 276 DLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYG 335

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+I  LC +G ++ ++    QM   G +P+I  FT+L+ G+ + G+  +A +L+  M+  
Sbjct: 336 TMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDR 395

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P VV ++T+I  L   G + EA ++   M   S  PNV +Y+A+I G+  AG L   
Sbjct: 396 GIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEV 455

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++ + M+S G  PN V +                ++L++ M      P+  T NT I  
Sbjct: 456 LKLLDDMLSVGLKPNAVTF----------------NTLLDDMLSMGLKPDVATCNTLIDS 499

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
            C  GR++  + L  +M       +  T N
Sbjct: 500 CCEDGRIEDVLTLFREMLSKAAKTDTVTEN 529



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/384 (22%), Positives = 168/384 (43%), Gaps = 21/384 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM  + +      + S+++ Y   G  ++A+++  ++   G
Sbjct: 162 IIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHG 221

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y+ ++D L      +    I ++M +    PNV TY  LL        +    
Sbjct: 222 QPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMN 281

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            L+  M   G  PD   +   + +  K G+++EA     +         +  Y  +I+GL
Sbjct: 282 NLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGL 341

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +++ A    C+M+D G+ P+++ ++ +I      G  E +  +  +M  RG  P +
Sbjct: 342 CKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTV 401

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             FT+++      G+  EA  L++ M      PNVV+Y+ +IHG    G +DE + +   
Sbjct: 402 VVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDD 461

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  T++ L+D                 M+S G  P+V     ++   C++  
Sbjct: 462 MLSVGLKPNAVTFNTLLDD----------------MLSMGLKPDVATCNTLIDSCCEDGR 505

Query: 356 FHQAHSLIEKMAFENCPPNTVTFN 379
                +L  +M  +    +TVT N
Sbjct: 506 IEDVLTLFREMLSKAAKTDTVTEN 529



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 4/255 (1%)

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           R  S   +P  V YT ++   C     + A + + ++       N ++F   ++ LC   
Sbjct: 3   RAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEK 62

Query: 390 RVDWAMKLLDQ-MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL--NIV 446
           R   AM ++ +   +  C P++ +Y  LL GL    + +EA +L+  + + G     N+V
Sbjct: 63  RTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVV 122

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +Y T++HG  +   V +A+ L  +ML  G   D +T N II   CK   ++ A ++L R 
Sbjct: 123 SYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVL-RQ 181

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
                  PD  +Y SL+ G  +SG ++EA   L++M   G  PN  T+++L+  L    G
Sbjct: 182 MFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGG 241

Query: 567 HLGPVYILDDIMANK 581
           H     IL+ ++ ++
Sbjct: 242 HTEAREILNSMIQSR 256



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 11/206 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +   +D       QM  +G+S    VF ++I+ +   G  E+A ++FY + + G
Sbjct: 337 MIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRG 396

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PTV ++  ++D L  E + +    ++  M    ++PNV +YN ++       ++D   
Sbjct: 397 IRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVL 456

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLL +M + G  P+AV++ T++  +           L+M     V+  N LI+  C++ +
Sbjct: 457 KLLDDMLSVGLKPNAVTFNTLLDDM-----------LSMGLKPDVATCNTLIDSCCEDGR 505

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTI 206
           IE+   L  EM+ +    + +T + I
Sbjct: 506 IEDVLTLFREMLSKAAKTDTVTENII 531


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/529 (29%), Positives = 248/529 (46%), Gaps = 36/529 (6%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +++ M + G   N  +Y  L+  LC+  RVD    +  +M    C P   +YT IV ++ 
Sbjct: 26  VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALF 85

Query: 147 KLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           + G+  EA  L   MR       +  Y  +IN +CKE K+EE   +L EMV++G+ P+V 
Sbjct: 86  ESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVP 145

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+ +I   C  G VE +  IL  M    CNPN  ++  L+ G+      H A  L ++M
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +     P+VV Y++LIHG C  G +D A  +   M EN   P+  TYS  ID   K G +
Sbjct: 206 LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A+ ++N +   G   N V YT ++   C+      A+SL+++M  E+C PN+ T+N  
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL 325

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC   +V  A+ L++ M Q      + TY  L+  +L+      A  ++ ++   G 
Sbjct: 326 IDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           Q ++  Y   +H  C  G + EA  ++  M   G   DA+T+ ++I AY   G +N A  
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 502 LLDRIRGGGEWNPDIISYTSLLW--------------GICNS---------------GGM 532
           +L R+   G  +P   +Y+ L+                +C+S                  
Sbjct: 446 VLKRMFDTG-CDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKF 504

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + A    +KML  G  PN  T+  L+  L   +G LG    L D M  +
Sbjct: 505 ETALELFEKMLEHGCSPNINTYAKLIIGL-CKVGRLGVAQKLFDHMNER 552



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 269/588 (45%), Gaps = 35/588 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    +   M  +G   +E  + ++I+    VG  ++ + +F ++RE    PTV+ Y 
Sbjct: 19  DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+ AL    R      ++S M+  G EPN+ TY +++ A+CK  +++   ++L EM  K
Sbjct: 79  VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEA 184
           G  P   +Y  ++   CK G VE A+E+     S         YN LI G C++  +  A
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL +M++  + P+V+TY+++I   C +G ++++  +L  M   G  P+  +++  +  
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  EA+ L+N +  +G   N V Y+ LI G C  G MD+A S+  +M    C PN
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            +TY+ALIDG  K   +  A  +   MI  G    V  YT ++  + +   F  AH +++
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P+   +  FI   C  G +  A  ++  M +   +P+  TY  ++D    + 
Sbjct: 379 QMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLG 438

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE--------------------- 463
            +  AF+++  +   G   +  TY+ ++  + +  +  +                     
Sbjct: 439 LLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADV 498

Query: 464 --------AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
                   A +L  KML  G   +  T+  +I   CK G++  A +L D +   G  +P 
Sbjct: 499 WKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERG-VSPS 557

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              Y SLL   C  G   +A   +  M+  G  P   + NVL   L+ 
Sbjct: 558 EAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYE 605



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 152/598 (25%), Positives = 267/598 (44%), Gaps = 35/598 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   +D    + ++M+ +    +   +  ++++    G   +A+ +F  +RE G
Sbjct: 45  LIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG 104

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +  Y  +++A+  E +      I   M   G+ P+V TYN L+   CK   V+ A 
Sbjct: 105 CEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQ 164

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           ++L  M +  C P+  +Y  ++   C+   V  A     + L  R    V  YN+LI+G 
Sbjct: 165 EILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQ 224

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   ++ A+ LL  M + G+ P+  TYS  I +LC  G +E +  +   +  +G   N 
Sbjct: 225 CKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANE 284

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T+L+ GY   G+  +A+ L +RM+ E  LPN   Y+ LI GLC    + EA+ +   
Sbjct: 285 VIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMES 344

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +      V TY+ LI    K G+   A +I ++M+S+G  P+V  YT  +   C    
Sbjct: 345 MIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGN 404

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  ++  M      P+ +T+   I    G G ++ A  +L +M    C P+  TY+ 
Sbjct: 405 IKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSC 464

Query: 416 LLDGLLRVNRVKE-----------------------------AFELVTEIEKCGIQLNIV 446
           L+  LL+    K+                             A EL  ++ + G   NI 
Sbjct: 465 LIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNIN 524

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY  ++ G+C+ G +  A +L   M   G       +N ++   C+ G   +A++L+  +
Sbjct: 525 TYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAM 584

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              G   P + S   L  G+   G  ++A +    +L  G   +   W +L+  L  N
Sbjct: 585 MEHGHL-PLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKN 641



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 220/446 (49%), Gaps = 46/446 (10%)

Query: 171 LINGLCK---------EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
           ++NG CK          + +  AF +   M  +G   N ++Y+ +I  LC+VG V+  + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           I  +M    C P + ++T ++      GR  EA +L++ M   G  PN+  Y+ +I+ +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               ++E   +  +M E    P+V TY+ALIDG+ K G +  A +I + M SN C+PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++   C+    H+A +L+ KM      P+ VT+N+ I G C  G +D A +LL+ M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            +   +P+  TY+  +D L +  R++EA  L   +++ GI+ N V Y  ++ G C+AG +
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI--------------------- 500
            +A  LL +ML E    ++ T+N +I   CK+ KV  A+                     
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 501 --------------QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
                         ++LD++   G + PD+  YT+ +   C  G ++EA   +  M   G
Sbjct: 361 IVAMLKEGDFDYAHRILDQMVSSG-YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVY 572
           + P+  T+ +++ + +  LG L P +
Sbjct: 420 VMPDALTYTLVIDA-YGGLGLLNPAF 444



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/535 (26%), Positives = 262/535 (48%), Gaps = 12/535 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  + ++ +++  + +L +M  +G+  S   + ++I+ Y + G+ E A ++   +    
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + YN ++     +        + S M    + P+V TYN L+   CK   +D AY
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGL 175
           +LL  M   G  PD  +Y+  + ++CK G++EEA  L       G+     +Y ALI+G 
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+++A  LL  M+     PN  TY+ +I  LC    V+ +L ++  M  +G    +
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T L+   L  G    A  + ++M+  G+ P+V  Y+  IH  C+ G++ EA  +   
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSM 414

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P+  TY+ +ID +   G L  A  +  RM   GC P+   Y+C++K L +  +
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEEL 474

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +     + +A  +  PN   F   +  +    + + A++L ++M ++ C PNI TY +
Sbjct: 475 TKK----YKNVALCDSIPN--VFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAK 528

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL +V R+  A +L   + + G+  +   YN++L+  C  G+  +A +L+G M+  G
Sbjct: 529 LIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHG 588

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
                 + N++     ++G    A  +   +   G +N D +++  L+ G+  +G
Sbjct: 589 HLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG-YNDDEVAWKILIDGLLKNG 642



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 237/511 (46%), Gaps = 34/511 (6%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  Q +L  M     + +E  +  +I  + R     +A+ +  ++ E  L P+V  YN 
Sbjct: 160 VEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNS 219

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++              + + M  +G+ P+ +TY++ +  LCK  R++ A  L   +  KG
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
              + V YT ++   CK G++++A  L  R  +       S YNALI+GLCKE K++EA 
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL 339

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+  M+ +G+   V TY+ +I ++   G+ + +  IL QM   G  P+++ +T+ +  +
Sbjct: 340 LLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAF 399

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   EA D+ + M   G +P+ + Y+ +I      G ++ A  V  +M +  C P+ 
Sbjct: 400 CTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSH 459

Query: 306 TTYSALIDG-----------------------FAKAGNLLG------ASQIWNRMISNGC 336
            TYS LI                         FA   ++        A +++ +M+ +GC
Sbjct: 460 HTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGC 519

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           SPN+  Y  ++  LC+      A  L + M      P+   +N+ +   C  G    A++
Sbjct: 520 SPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVR 579

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+  M ++  LP + + N L  GL      ++A  + + + +CG   + V +  ++ G+ 
Sbjct: 580 LVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLL 639

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           + G+     +LLG M   G ++   T+ ++I
Sbjct: 640 KNGLSDGCSELLGVMEARGCQIHPQTYRMLI 670



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 211/473 (44%), Gaps = 34/473 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M    ++ S   + S+I+   ++G  + A ++   + E G+ P    Y+  +D L 
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R    N +++++K  G++ N   Y  L+   CK  ++D A  LL  M  + C P++ 
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS 320

Query: 137 SYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++  +CK  +V+EA    E  ++ G    V  Y  LI  + KE   + A  +L +M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G  P+V  Y+  I + C  GN++ +  ++  MF RG  P+  ++T ++  Y   G  
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL 440

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIH--------------GLCSN-------------- 283
           + A D+  RM   G  P+   YS LI                LC +              
Sbjct: 441 NPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWK 500

Query: 284 -GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
               + A+ +  +M E+ C PN+ TY+ LI G  K G L  A ++++ M   G SP+   
Sbjct: 501 MMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAI 560

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+  ++  A  L+  M      P   + N    GL   G  + A  +   + 
Sbjct: 561 YNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLL 620

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           Q     +   +  L+DGLL+        EL+  +E  G Q++  TY  ++ G+
Sbjct: 621 QCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 191/420 (45%), Gaps = 34/420 (8%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I+ L +K  I+    L   +K +G+  +E ++ ++I+ Y + G  + A  +  R+     
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P    YN ++D L  E +      +  +M + G++  V TY IL+ A+ K    D A++
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHR 375

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLC 176
           +L +M + G  PD   YT  + + C  G ++EA ++ +M F  GV      Y  +I+   
Sbjct: 376 ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL-----------------------CDV 213
               +  AF +L  M D G DP+  TYS +I  L                        DV
Sbjct: 436 GLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADV 495

Query: 214 GNV------ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +V      ET+L +  +M   GC+PNI+++  L+ G    GR   A  L++ M   G  
Sbjct: 496 ADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVS 555

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+   Y++L++  C  G   +AV +   M E+   P + + + L  G  + G+   A  +
Sbjct: 556 PSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVV 615

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ ++  G + + VA+  ++  L +N +      L+  M    C  +  T+   I+GL G
Sbjct: 616 FSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGLDG 675


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 270/528 (51%), Gaps = 11/528 (2%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           Y +  +AE+ L  F ++   G  P+V+  N +L  L      +    +Y  M   G+ P 
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA- 158
           V T+N +L +  K   ++   K+ +EM  +      V+Y  +++   K G++EEAR    
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333

Query: 159 --MRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              R G  V+ Y  N LI G CK+   +EA+ +  EM++ GI P   TY+  I +LC+ G
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ +  +L  M      P++ S+ +L+ GY+   +  EAS L++ +      P++V Y+
Sbjct: 394 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYN 449

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI GLC +G+++ A  +  +M      P+V TY+ L+ GF K GNL  A++I++ M+  
Sbjct: 450 TLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRK 509

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC-PPNTVTFNTFIKGLCGCGRVDW 393
           G  P+  AYT       +     +A  L E+M  E+   P+   +N  I GLC  G ++ 
Sbjct: 510 GIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEK 569

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++   ++ +   +P+  TY  ++ G L   R K A +L  E+    +  +++TY  ++H
Sbjct: 570 AIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIH 629

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G  +AG + +AFQ   +M   G + + +T N +++  CK G ++ A + L ++   G  +
Sbjct: 630 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEG-IS 688

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  SYT L+   C+    +E     ++ML++ I P+  T   L + L
Sbjct: 689 PNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 736



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 244/479 (50%), Gaps = 2/479 (0%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  Q + + M + G+  +   F ++++S  + G  E+  K++  ++   ++ +   YN 
Sbjct: 255 MNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 314

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++      +       + +M+R G     +++N L++  CK    D A+ +  EM N G
Sbjct: 315 LINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAG 374

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLC 189
             P   +Y   + ++C+ G++++AREL     +  V  YN L++G  K  K  EA  L  
Sbjct: 375 IYPTTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFD 434

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           ++    I+P+++TY+T+I  LC+ GN+E +  +  +M  +   P++ ++T+LLKG++  G
Sbjct: 435 DLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNG 494

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTY 308
               A+++++ M+R+G  P+  AY+T   G    G  ++A  +  +M  E+   P++T Y
Sbjct: 495 NLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIY 554

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +  IDG  K GNL  A +   ++   G  P+ V YT +++   +   F  A  L ++M  
Sbjct: 555 NVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLS 614

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+ +T+   I G    GR++ A +   +MK+    PN+ T+N LL G+ +   + E
Sbjct: 615 KRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDE 674

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           A+  + ++E+ GI  N  +Y  ++   C      E  +L  +ML +  + D  T   + 
Sbjct: 675 AYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALF 733



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 220/458 (48%), Gaps = 10/458 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   +  +++ V  +  +MK   +  SE  +  +IN + + G  E+A +    ++  G
Sbjct: 280 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSG 339

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              T   +N +++    +  F     +   M   G+ P   TYNI ++ALC+  R+D A 
Sbjct: 340 FPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDAR 399

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           +LL  M     APD VSY T++    K+ +  EA  L     +G     +  YN LI+GL
Sbjct: 400 ELLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGL 455

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +E A  L  EM  + I P+VITY+T++      GN+  +  I  +M  +G  P+ 
Sbjct: 456 CESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDG 515

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++T+   G L  G + +A  L   M+ E    P++  Y+  I GLC  G++++A+    
Sbjct: 516 YAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQR 575

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++      P+  TY+ +I G+ + G    A  +++ M+S   SP+V+ Y  ++    +  
Sbjct: 576 KIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAG 635

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              QA     +M      PN +T N  + G+C  G +D A + L +M++    PN  +Y 
Sbjct: 636 RLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYT 695

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            L+     +++ +E  +L  E+    I+ +  T+  + 
Sbjct: 696 ILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALF 733



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 142/357 (39%), Gaps = 45/357 (12%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I  L E   ID  + LL  M    V      + ++++ Y ++    +A  +F  ++   +
Sbjct: 386 IRALCEFGRIDDARELLSSMAAPDVVS----YNTLMHGYIKMRKFVEASLLFDDLKAGNI 441

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P++  YN ++D L           +   M    + P+V TY  LLK   KN  +  A +
Sbjct: 442 NPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATE 501

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGL 175
           +  EM  KG  PD  +YTT      +LG  E+A  L             +++YN  I+GL
Sbjct: 502 IYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGL 561

Query: 176 CKEHKIEEAFW-----------------------------------LLCEMVDRGIDPNV 200
           CK   +E+A                                     L  EM+ + + P+V
Sbjct: 562 CKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSV 621

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ITY  +I      G +E +     +M  RG  PN+ +  +LL G    G   EA     +
Sbjct: 622 ITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCK 681

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           M  EG  PN  +Y+ LI   C     +E V +  +M +    P+  T+ AL     K
Sbjct: 682 MEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 738



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 132/284 (46%), Gaps = 31/284 (10%)

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           + +MI  G  P+V     +++VL  + M ++A  + E M      P  +TFNT +     
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G ++   K+  +MK+     +  TYN L++G  +  +++EA     ++++ G  +   +
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYS 346

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           +N ++ G C+ G+  EA+ +  +ML  G      T+NI I A C+ G++++A +LL  + 
Sbjct: 347 FNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMA 406

Query: 508 G------------------------------GGEWNPDIISYTSLLWGICNSGGMQEAFI 537
                                           G  NP I++Y +L+ G+C SG ++ A  
Sbjct: 407 APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQR 466

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             ++M ++ I P+  T+  L++    N G+L     + D M  K
Sbjct: 467 LKEEMTSQLIYPDVITYTTLLKGFVKN-GNLSMATEIYDEMLRK 509


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 241/509 (47%), Gaps = 40/509 (7%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P V  +N +L    A + F ++N +   MK  G+  N  T+ ++L ALC    +D A  
Sbjct: 26  EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85

Query: 122 LLVEMGNKGC-------APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
                  + C       APD+V+YT IV  + K G           + +G+  Y  ++  
Sbjct: 86  YFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGN----------YDAGLEYYEKMVAS 135

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C                    +P ++TY+ ++  LC    VE +  +  +M  +G  P+
Sbjct: 136 KC--------------------EPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPD 175

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +++SL+ G    GR  EA  L + MI  G  P  VAY++++ GLC  G + EAV    
Sbjct: 176 IIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 235

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M      P V TYS ++ G+   G +  A  +   M    C+P+ ++YT  ++ L    
Sbjct: 236 EMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIG 295

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A  + E M  + C P+  T+   I   C  G +  A  +L  M +    PN   Y 
Sbjct: 296 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 355

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++DG ++ +R++EA EL   I K GI  + VTYNT+++ +C+   + EA +LL +M   
Sbjct: 356 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 415

Query: 475 GTKLDA--ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             +L+   +T+++II+   K G    A  LL  +   G   PD  +YTSL+  +  +G +
Sbjct: 416 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI-PDCFTYTSLIQTLAGAGKV 474

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             A   L++ML  GI P+  T+  LV+ L
Sbjct: 475 SRAMELLEEMLKAGIFPDDHTYGTLVQIL 503



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 208/434 (47%), Gaps = 44/434 (10%)

Query: 24  EGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS 82
           E +   + V + ++++   + G  +  L+ + ++     +PT+  Y  ++D L   ++  
Sbjct: 99  EAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVE 158

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
               ++  M R G +P++  Y+ L+  L K  RVD A KL+  M  +G  P AV+YT+IV
Sbjct: 159 RACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIV 218

Query: 143 SSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           + +CK G+++EA +             V  Y+ ++ G     K+EEAF ++ EM DR   
Sbjct: 219 AGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCA 278

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS-------------------- 237
           P+ I+Y+  I +L  +G  E +  +   M  +GC P++H+                    
Sbjct: 279 PDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHV 338

Query: 238 ---------------FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
                          +T ++ G++   R  EA +L+ R++++G LP+ V Y+T+I+ LC 
Sbjct: 339 LRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCK 398

Query: 283 NGSMDEAVSVSYQME--ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              MDEA+ +  +M+  +    P++ TYS +I G  K G    A  +   MI NG  P+ 
Sbjct: 399 LKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDC 458

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             YT +++ L       +A  L+E+M      P+  T+ T ++ LC    VD A  LL +
Sbjct: 459 FTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQE 517

Query: 401 MKQYECLPNITTYN 414
           M +    PN  T+ 
Sbjct: 518 MMRNGHTPNEFTFK 531



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 167/356 (46%), Gaps = 10/356 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + L+  M   G   +   + S++    + G  ++A+K    +R   
Sbjct: 182 LIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 241

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P V  Y+ I+   +   +      +   M      P+  +Y + ++AL    R + A 
Sbjct: 242 LRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 301

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALING 174
           K+   M  KGC PD  +Y  I+ + CK G +  A  + +R     +V      Y  +++G
Sbjct: 302 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHV-LRLMDKAAVKPNRYIYTMIMDG 360

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG--CN 232
             K  ++EEA  L   ++  GI P+ +TY+T+I++LC +  ++ +L +L +M  R     
Sbjct: 361 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELE 420

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I +++ ++ G    G    A DL   MI  G +P+   Y++LI  L   G +  A+ +
Sbjct: 421 PSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL 480

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
             +M +    P+  TY  L+    ++ ++  A  +   M+ NG +PN   +  + K
Sbjct: 481 LEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEK 535



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 147/296 (49%), Gaps = 11/296 (3%)

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +L+  L   G + +A+      + +   PNV++++ L+ GFA   +    + +   M + 
Sbjct: 2   SLLLALVRGGQLSDALGF---FQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKAR 58

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC-------PPNTVTFNTFIKGLCG 387
           G + N   +  ++  LC      +A S       E C        P++VT+   + GL  
Sbjct: 59  GITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFK 118

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G  D  ++  ++M   +C P + TY  L+DGL + ++V+ A ++  E+ + G + +I+ 
Sbjct: 119 AGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y++++ G+ +AG V EA +L+  M+  G    A+ +  I+   CK G++  A++ +  +R
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
                   + +Y+ ++ G    G ++EAF  +++M +    P+  ++ + + +L+S
Sbjct: 239 RRRLRPR-VDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYS 293


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 249/521 (47%), Gaps = 22/521 (4%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  YN +++ L  E        ++  M   G  PN+ TYN ++  LCK   +D A  +
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 123 LVEMGNKG----------------CAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS 163
           L +M +KG                  PD V+Y+ ++   CK+G+  EAR +    +R G 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 164 GVSVYN--ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
               Y    L++G   +  + +   LL  M+  GI      ++ +I +      ++ ++ 
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
              +M  +G +PN+ ++T+++      GR  +A   +++M+ EG  P+++ +++LIHGLC
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           + G   +   +S++M      PN    + ++D   K G +L A   ++++I  G  P+VV
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +YT ++   C +    ++  L+ +M      P+ VT++  + G C  GRVD A+ L  +M
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
              +  PN  TYN +L GL    RV  A E   +I   GIQL I TYN +L G+C    V
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA ++   +  +  +L+  TFNI+I    K G++ +A  L   I   G   PD I Y  
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSG-LVPDAIIYGL 615

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++      G ++E+      M   G   N  T N +VR L 
Sbjct: 616 MIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLL 656



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 243/481 (50%), Gaps = 18/481 (3%)

Query: 91  MKRDGME--PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           M  DG    PNV +YN+++  L K   VD AY L  EM  +G  P+ V+Y +++  +CK 
Sbjct: 128 MADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKA 187

Query: 149 GQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
             +++A               A++  +  + ++EEA  LL +M   G+ P+V+TYS +I 
Sbjct: 188 QAMDKA--------------EAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLID 233

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C +G    +  I   M  RG NP+ +++ +LL GY   G   +  DL   MI++G   
Sbjct: 234 YYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPL 293

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
               ++ LI     N ++D+A++   +M +    PNV TY+ +ID   KAG +  A   +
Sbjct: 294 EDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHF 353

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           ++M+S G SP+++ +T ++  LC    + +   L  +M      PN +  NT +  LC  
Sbjct: 354 SQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKE 413

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           GRV  A    DQ+      P++ +Y  L+DG     ++ E+ +L+  +   G++ + VTY
Sbjct: 414 GRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTY 473

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           + +L+G C+ G V +A  L  +M  +  K +AIT+NII++     G+V  A +   +I  
Sbjct: 474 SALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVD 533

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G     I +Y  +L G+C +  + EA    Q + ++       T+N+++  L   +G +
Sbjct: 534 SG-IQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLL-KVGRI 591

Query: 569 G 569
           G
Sbjct: 592 G 592



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 245/492 (49%), Gaps = 5/492 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++++ +K +++    LL++M   G+      +  +I+ Y ++G   +A  +F  +   G
Sbjct: 196 VLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG 255

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  +L     +     ++ + + M +DG+      +NIL++A  KN  +D A 
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAM 315

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGL 175
              +EM  KG +P+ V+YTT++  +CK G+VE+A    +     G+S     + +LI+GL
Sbjct: 316 TAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + ++   L  EM++RGI PN I  +TI+ SLC  G V  +     Q+   G  P++
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDV 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+T L+ GY L G+  E+  L  RM+  G  P+ V YS L++G C NG +D+A+++  +
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYRE 495

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ ++ G   AG ++ A + + +++ +G    +  Y  ++  LC+N+ 
Sbjct: 496 MFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  + + +  +       TFN  I GL   GR+  A  L   +     +P+   Y  
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGL 615

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++   +    ++E+ EL   +EK G   N  T N I+  +   G V  A   L K+  + 
Sbjct: 616 MIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKE 675

Query: 476 TKLDAITFNIII 487
             ++A T  ++I
Sbjct: 676 YSVEASTAVLLI 687



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 243/555 (43%), Gaps = 58/555 (10%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           E  G +  +  M  +G +C   V  +  VIN   + G  ++A  +F+ +   G  P +  
Sbjct: 117 ESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVT 176

Query: 68  YNHILDALLAENRFSMINPIYSNM----------------KRDGMEPNVFTYNILLKALC 111
           YN ++D L           +   M                   G++P+V TY++L+   C
Sbjct: 177 YNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYC 236

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS---- 166
           K  R   A  +   M  +G  PDA +Y T++      G + +  +L A+    G+     
Sbjct: 237 KIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH 296

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           V+N LI    K   +++A     EM  +G  PNV+TY+T+I  LC  G VE ++    QM
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356

Query: 227 FVRGCNPNIHSFTSLLKGY-LLG----------------------------------GRT 251
              G +P+I +FTSL+ G   +G                                  GR 
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA D ++++I  G  P+VV+Y+ LI G C +G MDE++ +  +M      P+  TYSAL
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSAL 476

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ++G+ K G +  A  ++  M S    PN + Y  ++  L        A     K+     
Sbjct: 477 LNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGI 536

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
                T+N  + GLC    VD A+++   ++  E    + T+N ++ GLL+V R+ +A  
Sbjct: 537 QLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKS 596

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L + I   G+  + + Y  ++      G++ E+ +L   M   G   ++ T N I+    
Sbjct: 597 LFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLL 656

Query: 492 KQGKVNNAIQLLDRI 506
           ++G V  A   L +I
Sbjct: 657 EKGDVRRAGTYLTKI 671



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 169/359 (47%), Gaps = 6/359 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V +   QM  EG+S     F S+I+    +G  ++  K+ + +   G+ P     N I
Sbjct: 348 DAVSHF-SQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTI 406

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D+L  E R    +  +  +   G++P+V +Y IL+   C + ++D + KLL  M + G 
Sbjct: 407 MDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGL 466

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFW 186
            PD V+Y+ +++  CK G+V++A  L    F   V      YN +++GL    ++  A  
Sbjct: 467 RPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAARE 526

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
              ++VD GI   + TY+ ++  LC+   V+ +L +   +  +     + +F  ++ G L
Sbjct: 527 FYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLL 586

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  +A  L++ ++  G +P+ + Y  +I      G ++E+  +   ME+N C  N  
Sbjct: 587 KVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSR 646

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           T +A++    + G++  A     ++     S        ++ ++ +     +   L EK
Sbjct: 647 TLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEASTAVLLISIVSERKYQKEVKFLPEK 705


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 164/599 (27%), Positives = 281/599 (46%), Gaps = 77/599 (12%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N++ +VG  + A+++  ++ + GL+P V  YN +++  +    F  +  +   M   G
Sbjct: 232 VVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERG 291

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMG-NKGCAPDAVSYTTIVSSICKLGQVEEA 154
           +  NV T  +L++  CK  ++D A KLL E+  ++    D   Y  +V   C++G++E+A
Sbjct: 292 VSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDA 351

Query: 155 ---RELAMRFGSGVSV-------------------------------------YNALING 174
              R+  +R G  V++                                     YN L++G
Sbjct: 352 VRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDG 411

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+E K+ +AF L  EM+  GI P V+TY+T+I  L DVG+ + +L +   M  RG  PN
Sbjct: 412 YCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPN 471

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             S  ++L  +   G +  A  LW  ++  GF  + VA++T+I GLC  G + EA +V  
Sbjct: 472 EISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFD 531

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+E    P+  TY  L DG+ K GN+  A QI   M     S ++  Y  ++  L +  
Sbjct: 532 RMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIR 591

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +    L+ +M      PN VT+ T I G C   ++D A  L  +M +    PN+   +
Sbjct: 592 KLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCS 651

Query: 415 ELLDGLLRVNRVKEA---------FELVTEIEKCGIQL---------------------- 443
           +++  L R +R+ EA         F+++    KC  +L                      
Sbjct: 652 KIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDIC 711

Query: 444 ----NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
               N + YN  + G+C++G + EA  +L  ++  G   D  T+  +I+A    G V+ A
Sbjct: 712 NSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEA 771

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +L D +   G   P+I  Y +L+ G+C  G +  A     K+  +G+ PN  T+N+L+
Sbjct: 772 FKLRDEMLEKG-LIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILI 829



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 271/578 (46%), Gaps = 41/578 (7%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G    A+ +F +I   G+ P V + + +++A     R  +   +   M ++G+EPNV TY
Sbjct: 205 GEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTY 264

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           N L+         +G  ++L  M  +G + + V+ T ++   CK G+++EA +L      
Sbjct: 265 NGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEE 324

Query: 164 GV------SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                    VY  L++G C+  ++E+A  +  EM+  G+  N++  +T+I   C +G V 
Sbjct: 325 DELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVC 384

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +  +   M      P+ +S+ +LL GY   G+  +A  L   M+ +G  P VV Y+T+I
Sbjct: 385 EAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVI 444

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GL   GS D+A+ + + M E    PN  +   ++D F K G+   A  +W  ++  G +
Sbjct: 445 KGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFT 504

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            + VA+  M+  LC+     +A ++ ++M      P+ +T+ T   G C  G V  A ++
Sbjct: 505 KSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQI 564

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
              M++     +I  YN L+DGL ++ ++ +  +L+ E++  G+  N+VTY T++ G C 
Sbjct: 565 KGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCD 624

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR---------- 507
              + +AF L  +M+  G   + +  + I+ +  +  +++ A  +LD++           
Sbjct: 625 EQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNK 684

Query: 508 -----------------GGGEWNPDI-------ISYTSLLWGICNSGGMQEAFIYLQKML 543
                                   DI       I Y   + G+C SG + EA   L  ++
Sbjct: 685 CSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLM 744

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + G  P+  T+  L+ +  S  G++   + L D M  K
Sbjct: 745 SRGFLPDNFTYCTLIHAC-SVSGNVDEAFKLRDEMLEK 781



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 246/505 (48%), Gaps = 30/505 (5%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           +KV  V C+     ++I  Y ++G   +A ++F  + ++ LKP    YN +LD    E +
Sbjct: 363 LKVNMVICN-----TLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGK 417

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
            S    +   M  DG+ P V TYN ++K L      D A  L   M  +G  P+ +S  T
Sbjct: 418 VSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCT 477

Query: 141 IVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++    K+G  + A    +E+  R F      +N +I+GLCK  K+ EA  +   M + G
Sbjct: 478 MLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELG 537

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+ ITY T+    C  GNV+ +  I G M  +  + +I  + SL+ G     + ++ +
Sbjct: 538 LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVT 597

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           DL   M   G  PNVV Y TLI G C    +D+A  + ++M E    PNV   S ++   
Sbjct: 598 DLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSL 657

Query: 316 AKAGNLLGASQIWNRM-------ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL---IEK 365
            +   +  A+ I ++M       + N CS  +V          +N++  +A  +   ++K
Sbjct: 658 YRDDRISEATVILDKMLDFDILAVHNKCSDKLV----------KNDLTLEAQKIADSLDK 707

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
               N   N + +N  I GLC  G++D A  +L  +     LP+  TY  L+        
Sbjct: 708 SDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGN 767

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           V EAF+L  E+ + G+  NI  YN +++G+C+ G +  A +L  K+  +G   +A+T+NI
Sbjct: 768 VDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNI 827

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGG 510
           +I  YC+ G ++ A +L +++   G
Sbjct: 828 LIGCYCRIGDLDKASRLREKMTEEG 852



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 239/550 (43%), Gaps = 36/550 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+++++   +C     ++  NS+ R      ++ +              +   ++D   
Sbjct: 73  LLRRLRLHPSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEATTVLRQLMDLHC 132

Query: 77  AEN--RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
             N   +++ N ++S  K  G    VF  ++L+KA  +      A  +  EM   G  P 
Sbjct: 133 TNNYRAYAVCNHVFSVYKEFGFCSGVF--DMLMKAFAERGMTKHALYVFDEMSRIGRVPG 190

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
             S + ++    KL Q  E R   M F                            ++V  
Sbjct: 191 LRSCSFLLG---KLVQKGEGRVAVMVFD---------------------------QIVGT 220

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI P+V   S ++++ C VG V+ ++ +L +M   G  PN+ ++  L+ GY+  G     
Sbjct: 221 GIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGV 280

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS-CPPNVTTYSALID 313
             +   M   G   NVV  + L+ G C  G MDEA  +  ++EE+     +   Y  L+D
Sbjct: 281 ERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVD 340

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G+ + G +  A +I + M+  G   N+V    ++K  C+     +A  +   M   N  P
Sbjct: 341 GYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKP 400

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +  ++NT + G C  G+V  A  L ++M      P + TYN ++ GL+ V    +A  L 
Sbjct: 401 DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLW 460

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             + + G+  N ++  T+L    + G    A  L  ++L  G     + FN +I   CK 
Sbjct: 461 HLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKM 520

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           GK+  A  + DR++  G  +PD I+Y +L  G C +G +QEAF     M  + +  +   
Sbjct: 521 GKLMEAGAVFDRMKELG-LSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEM 579

Query: 554 WNVLVRSLFS 563
           +N L+  LF 
Sbjct: 580 YNSLIDGLFK 589



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 15/402 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D   +L   M   GV+ +E    ++++ + ++G +++A+ ++  I   G   +   +N +
Sbjct: 454 DDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTM 513

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +  L    +      ++  MK  G+ P+  TY  L    CKN  V  A+++   M  +  
Sbjct: 514 ISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAM 573

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFW 186
           +     Y +++  + K+ ++ +  +L +          V  Y  LI+G C E K+++AF 
Sbjct: 574 SASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFH 633

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS--LLKG 244
           L  EM++RG  PNV+  S I+SSL     +  +  IL +M        +H+  S  L+K 
Sbjct: 634 LYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA-VHNKCSDKLVKN 692

Query: 245 YLLGGRTHEASDLWNRMIREGF---LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
            L    T EA  + + + +      L N + Y+  I GLC +G +DEA SV   +     
Sbjct: 693 DL----TLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGF 748

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  TY  LI   + +GN+  A ++ + M+  G  PN+  Y  ++  LC+     +A  
Sbjct: 749 LPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQR 808

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           L  K+  +   PN VT+N  I   C  G +D A +L ++M +
Sbjct: 809 LFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTE 850



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 170/348 (48%), Gaps = 18/348 (5%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G+  E   V     +MK  G+S  E  + ++ + Y + G  ++A ++   +    +  
Sbjct: 519 KMGKLMEAGAV---FDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSA 575

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           ++++YN ++D L    + + +  +   M+  G+ PNV TY  L+   C   ++D A+ L 
Sbjct: 576 SIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLY 635

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKI 181
            EM  +G  P+ V  + IVSS+ +  ++ EA  +   M     ++V+N      C +  +
Sbjct: 636 FEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNK-----CSDKLV 690

Query: 182 EEAFWLLCEMVDRGID--------PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           +    L  + +   +D         N I Y+  I  LC  G ++ +  +L  +  RG  P
Sbjct: 691 KNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLP 750

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  ++ +L+    + G   EA  L + M+ +G +PN+  Y+ LI+GLC  G++D A  + 
Sbjct: 751 DNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLF 810

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           Y++ +    PN  TY+ LI  + + G+L  AS++  +M   G S  ++
Sbjct: 811 YKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGISTRII 858



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 62/129 (48%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I+ L +  ++D  + +L  +   G       + ++I++    G  ++A K+   + E GL
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P + IYN +++ L           ++  + + G+ PN  TYNIL+   C+   +D A +
Sbjct: 784 IPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843

Query: 122 LLVEMGNKG 130
           L  +M  +G
Sbjct: 844 LREKMTEEG 852


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 278/559 (49%), Gaps = 7/559 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M+  G    +  F SV++   + G  E+AL +   +   G K +V +   ++    
Sbjct: 234 VLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYC 293

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        I+    RDG+ P   TY +L++   +    + AY+L  +M + G  P   
Sbjct: 294 LQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTN 353

Query: 137 SYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            +  ++  +      ++A    +E+A         YN LI+ LC+  KI EA  L  +M 
Sbjct: 354 EFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMN 413

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           + G+ P ++TY +++   C  G ++ ++ +  +M  +G  PN+ ++T+L+KG++      
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  L   M + G   N   Y+TLI+GLC  G + E   +  + E     P   TY+++I
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           +GF KAG +  A  ++ +M + G  PN+V YT  +   C+ +    A  ++  +  +   
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLR 593

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+   +N+ I G C  G +  A+++L  M +   LPNI+ YN  + G   +  ++EA   
Sbjct: 594 PDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRF 653

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++ K GI L+  TY T++ G  + G V  A +L  +M+ +G   D ITF  + +  C+
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            G +++A +LLD +    +  P+++ Y  L+ G   +G +QEAF    +ML   I P+  
Sbjct: 714 NGDIDDARKLLDEM-NRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDT 772

Query: 553 TWNVLVRSLFSNLGHLGPV 571
           T+++LV     +LG   P+
Sbjct: 773 TYDILVG--MKSLGSDSPI 789



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/507 (27%), Positives = 257/507 (50%), Gaps = 8/507 (1%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           +++ ++ A   E  +     ++  M    +EP+    ++ + +LCK    + A  +L +M
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGVSVYNA--LINGLCKEHKI 181
            + G  P   ++ ++V  + K G++EEA   ++  +  G  +SV  A  L++G C + ++
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            +A  +  E +  G+ P  +TY+ +I    + G  E +  +  QM   G  P+ + F  +
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +KG L      +A  L+  M   G +P+   Y+ LIH LC    + EA+++  +M E   
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P + TY +L+  +   G +  A +++  M   G +PNVV YT ++K       F +A++
Sbjct: 418 KPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYA 477

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+ +M       N  T+NT I GLC  GRV    ++L + +    +P   TYN +++G +
Sbjct: 478 LLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFI 537

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +  AF +  ++   GI  NIVTY + + G C+      A ++L  +  +G + D  
Sbjct: 538 KAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIA 597

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +N +IY +C++G +++A+Q+L  +   G   P+I  Y S + G  N   M+EA  + +K
Sbjct: 598 AYNSLIYGFCQEGNMSHALQVLVLMLKDGLL-PNISVYNSFITGYKNLKMMEEALRFYEK 656

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHL 568
           M+ EGI  + AT+  L+   FS  G++
Sbjct: 657 MIKEGIDLDTATYTTLIDG-FSKDGNV 682



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 214/507 (42%), Gaps = 75/507 (14%)

Query: 126 MGNKGCAPDAVSYTTIVS-----------------------------------SICKLGQ 150
           M  +G  PDA S T +++                                   +  K G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            ++A  L     A        V +  I  LCK      A  +L +M D G  P   T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  L   G +E +L I  ++   G   ++   T+L+ GY L     +A D++   +R+G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE--------------------------- 298
            +P  V Y+ LI G    G  ++A  +  QM +                           
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 299 -------NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
                  +S  P+  TY+ LI    +   +  A  +W +M   G  P +V Y  ++   C
Sbjct: 373 SLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYC 432

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
            N    +A  L  +M  +   PN VT+ T +KG       D A  LL +MKQ     N  
Sbjct: 433 VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDY 492

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TYN L++GL  V RV E  E++   E  G     +TYN+I++G  +AGM+  AF +  +M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
             +G   + +T+   I  YCK    + A+++L+ +R  G   PDI +Y SL++G C  G 
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG-LRPDIAAYNSLIYGFCQEGN 611

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLV 558
           M  A   L  ML +G+ PN + +N  +
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFI 638



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 202/417 (48%), Gaps = 30/417 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ +I     L ++M   GV      + S++  Y   G  ++A+K++  +   G
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++   + +  F     + + MK++G+  N +TYN L+  LC   RV    
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG 511

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           ++L     +G  P A++Y                              N++ING  K   
Sbjct: 512 EMLKRFETEGFVPTAMTY------------------------------NSIINGFIKAGM 541

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +  AF +  +M  +GI PN++TY++ I   C     + +L +L  +  +G  P+I ++ S
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G+   G    A  +   M+++G LPN+  Y++ I G  +   M+EA+    +M +  
Sbjct: 602 LIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEG 661

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              +  TY+ LIDGF+K GN+  A ++++ M++ G  P+ + +T +   LC+N     A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            L+++M   +  PN + +N  I G    G++  A +L D+M + + +P+ TTY+ L+
Sbjct: 722 KLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 175/371 (47%), Gaps = 2/371 (0%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M  RG+ P+  + + +++      +   +L +L +M  +G   +   F  +++     G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A  L++ M      P+    S  I  LC     + A+ V  +M++    P   T+++
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++D   K G +  A  I + +++ G   +VV  T ++   C      +A  + E+   + 
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P  VT+   I+G    G  + A +L  QM+ +  LP+   +N ++ GLL     K+A 
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L  E+   GI  +  TYN ++H +C+   + EA  L  KM   G K   +T++ ++  Y
Sbjct: 373 SLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCY 431

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C  G ++ A++L   + G G + P++++YT+L+ G  N     +A+  L +M   G+  N
Sbjct: 432 CVNGCMDEAVKLYTEMPGKG-FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCN 490

Query: 551 FATWNVLVRSL 561
             T+N L+  L
Sbjct: 491 DYTYNTLINGL 501



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M  +G  LDA  F++++ A  K+G  ++A++L D +    E  PD    +  +  +C  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEM-PASEIEPDQRVCSVAIASLCKL 225

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
                A + L+KM + G  P   T+N +V  L         ++I D+++A 
Sbjct: 226 RDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLAT 276


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 230/455 (50%), Gaps = 10/455 (2%)

Query: 120 YKLLVEM---GNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNAL 171
           +++L +M    ++  A +  +YTT++++ C  G +  ++      L   F      Y + 
Sbjct: 54  HRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSF 113

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + G C+   +  A  L   M  RG      TY+ ++  LC  G V  ++ +   M   GC
Sbjct: 114 VVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGC 173

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+ H + +++ G    GRT EA  L +  + EGF PNVV Y+ LI G C+ G ++ AV 
Sbjct: 174 APDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVD 233

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           V  +M+ N C PNV TY+ LI GF K+  L  A  +++RM+  G  PNVV YT +++  C
Sbjct: 234 VFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQC 293

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
            +     A+ L++ M      PN  T +  I  LC   RV  A  LL  + Q     N  
Sbjct: 294 SDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEI 353

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            Y  L+DGL +  R   A  L+  +   G   +  TY++++ G+CR   + EA  +L  M
Sbjct: 354 VYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM 413

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           + +G +   +T+ III    ++   + + ++LD++   G   PD+ +YT  +   C+ G 
Sbjct: 414 MEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAG-IKPDVFTYTIFVRSYCHEGR 472

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           M++A   +  M++ G+CPN  T+N L+   ++NLG
Sbjct: 473 MEDAEHMMLHMVDHGVCPNLVTYNALICG-YANLG 506



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 253/545 (46%), Gaps = 28/545 (5%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL     EG   +  V+ ++I+ Y  VG  E A+ +F R+   G  P V+ Y  ++ 
Sbjct: 196 AETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELIS 255

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                 +      ++S M   G+ PNV TY  L++  C + ++D AY+LL  M N G  P
Sbjct: 256 GFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVP 315

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAF 185
           +  + + ++ ++CK  +V EA+ L    GS +         VY +LI+GLCK  +   A 
Sbjct: 316 NEWTCSVLIDALCKHERVGEAQLL---LGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+  +V +G  P+  TYS++I  LC    +  ++ +L  M  +G  P+  ++T ++   
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +       +  + ++MI  G  P+V  Y+  +   C  G M++A  +   M ++   PN+
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNL 492

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ----NNM------ 355
            TY+ALI G+A  G    A   +  M++NGC PN  +YT ++++L +    NN+      
Sbjct: 493 VTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVS 552

Query: 356 ------FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
                     H L+E+M     P     +N F+  LC   R+D A  LL +M+     P+
Sbjct: 553 IWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPS 612

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              Y  ++    R+  + EA   V  + K G    + +Y  I+  +C  G +  A Q+ G
Sbjct: 613 EDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFG 672

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            ML +    + I + I+I    ++G V     LL  +     + P    Y  L   I ++
Sbjct: 673 DMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLS-VMEEKNYRPSDALYARLTGKITDA 731

Query: 530 GGMQE 534
             +QE
Sbjct: 732 NDIQE 736



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 217/440 (49%), Gaps = 6/440 (1%)

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S++ R G  P+   Y   +   C+   +  A +L V M  +GC   A +YT ++  +C  
Sbjct: 96  SSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGA 155

Query: 149 GQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G V EA  +     A        VY  +++GLC   +  EA  LL + +  G +PNV+ Y
Sbjct: 156 GMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + +I   C+VG++E ++ +  +M V GC+PN+ ++T L+ G+    +   A  L++RM+ 
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G +PNVV Y+ LI G CS+G +D A  +   ME +   PN  T S LID   K   +  
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  +   +I  G   N + YT ++  LC+   F  A  L++ +  +   P+  T+++ I 
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLID 395

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC    +  AM +LD M +    P+  TY  ++D L+R      + +++ ++   GI+ 
Sbjct: 396 GLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKP 455

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++ TY   +   C  G + +A  ++  M+  G   + +T+N +I  Y   G  + A    
Sbjct: 456 DVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTF 515

Query: 504 DRIRGGGEWNPDIISYTSLL 523
             +   G   P+  SYT LL
Sbjct: 516 KHMVANG-CKPNEESYTVLL 534



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/582 (26%), Positives = 250/582 (42%), Gaps = 23/582 (3%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M + G   +   + ++++     G+  +A+ +F  ++  G  P   +Y  ++  L    R
Sbjct: 133 MPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 + S+   +G EPNV  YN L+   C    ++ A  +   M   GC+P+  +YT 
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252

Query: 141 IVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++S  CK  +++ A  L  R         V  Y ALI G C + +++ A+ LL  M + G
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PN  T S +I +LC    V  +  +LG +  +G   N   +TSL+ G    GR   A 
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L   ++ +GF+P+   YS+LI GLC    + EA+ V   M E    P+  TY+ +ID  
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            +     G+ +I ++MI+ G  P+V  YT  V+  C       A  ++  M      PN 
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNL 492

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL-------------- 421
           VT+N  I G    G    A      M    C PN  +Y  LL  L+              
Sbjct: 493 VTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVS 552

Query: 422 --RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             ++  +K    L+ E+ K  +   I  YN  L  +CR   + EA  LL +M        
Sbjct: 553 IWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPS 612

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
              +  II   C+   +  A+  +D +   G + P + SY  ++  +C  G +Q A    
Sbjct: 613 EDVYTSIIACCCRLKMLTEALTFVDSMVKSG-YIPQLESYRHIISSLCEEGSIQTAKQVF 671

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             ML++        W +L+  L    G++     L  +M  K
Sbjct: 672 GDMLSKEYNYEEIAWRILIDGLLQK-GYVAECSSLLSVMEEK 712



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 200/411 (48%), Gaps = 5/411 (1%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           NA +  L +   + +       M  R    N+ TY+T+I++ C  G++  S   L  +  
Sbjct: 45  NAFLMALARHRMLADMESFASRMPAR----NLRTYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  P+ H++TS + GY   G    A  L+  M   G +     Y+ L+HGLC  G + E
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+SV   M+ + C P+   Y+ ++ G   AG    A  + +  ++ G  PNVV Y  ++ 
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C       A  + E+M    C PN  T+   I G C   ++D AM L  +M     +P
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ TY  L+ G     ++  A+ L+  +E  G+  N  T + ++  +C+   V EA  LL
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
           G ++ +G K++ I +  +I   CK G+   A +L+  +   G + PD  +Y+SL+ G+C 
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG-FVPDAHTYSSLIDGLCR 399

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
              + EA + L  M+ +G+ P+  T+ +++  L   +G  G   ILD ++A
Sbjct: 400 QKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIA 450



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/443 (22%), Positives = 186/443 (41%), Gaps = 27/443 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSE---GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           ++D    LLQ M+  G+  +E    V I  +  + RVG A+  L       + G+K    
Sbjct: 297 QLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLI---QKGIKVNEI 353

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           +Y  ++D L    RF+  + +   +   G  P+  TY+ L+  LC+   +  A  +L +M
Sbjct: 354 VYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDM 413

Query: 127 GNKGCAPDAVSYTTIVSSICK-LGQVEEARELAMRFGSGVS----VYNALINGLCKEHKI 181
             KG  P  V+YT I+  + + +G     + L     +G+      Y   +   C E ++
Sbjct: 414 MEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRM 473

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E+A  ++  MVD G+ PN++TY+ +I    ++G    +      M   GC PN  S+T L
Sbjct: 474 EDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVL 533

Query: 242 LKGYLLGGRTH----EASDLWN------------RMIREGFLPNVVAYSTLIHGLCSNGS 285
           L+  +    ++     +  +W              M++      +  Y+  +  LC    
Sbjct: 534 LRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDR 593

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +DEA  +  +M+  +  P+   Y+++I    +   L  A    + M+ +G  P + +Y  
Sbjct: 594 LDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRH 653

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+      A  +   M  +      + +   I GL   G V     LL  M++  
Sbjct: 654 IISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKN 713

Query: 406 CLPNITTYNELLDGLLRVNRVKE 428
             P+   Y  L   +   N ++E
Sbjct: 714 YRPSDALYARLTGKITDANDIQE 736


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 158/553 (28%), Positives = 272/553 (49%), Gaps = 12/553 (2%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L +M+  G+S     + +++N++ R G+  +A  +  R+++ G+ PT   YN ++ A   
Sbjct: 232 LSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYAR 291

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAV 136
                    +   M   G EP+++TYN+L   LC+  +VD A+KL  EM   G  +PD V
Sbjct: 292 LGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVV 351

Query: 137 SYTTIVSSICK-------LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +Y T+V +  K       L  +EE RE  ++  S +  +N ++ GLC+E ++EEA   L 
Sbjct: 352 TYNTLVDACFKCQRSSDALNLLEEMREKGVK--SSLVTHNIIVKGLCREGQLEEALGRLE 409

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M + G+ P+VITY+T+I + C  GNV  +  ++ +M   G   +  +  +LL       
Sbjct: 410 MMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 469

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  EA +L     + GF+P+ V+Y T++         + A+ +  +M +    P+++TY+
Sbjct: 470 RYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYN 529

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI G +  G L  A    N ++  G  P+   Y  ++   C+     +A     KM   
Sbjct: 530 TLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVEN 589

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           +  P+ VT NT + GLC  GR++ AMKL +   +     ++ TYN L+  L + N V  A
Sbjct: 590 SFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTA 649

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                ++E  G+Q ++ TYN +L  +  AG  VEA ++L K L E  KL    F   I +
Sbjct: 650 LRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHK-LNESGKLYGRFFYPSIKS 708

Query: 490 YCKQGKVNNAIQLLDRIRG-GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             +  +     ++   I   G     D  SY   +  +C  G ++EA   L +M+ +G+ 
Sbjct: 709 SVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMS 768

Query: 549 PNFATWNVLVRSL 561
            + +T+  L+  L
Sbjct: 769 VDNSTYITLMEGL 781



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 243/521 (46%), Gaps = 42/521 (8%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + +L  F+ +    L P    +N ++    ++   +      S M+  G+ P+  TYN L
Sbjct: 191 QASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTL 250

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           L A C+   +  A  LL  M  +G  P   +Y T+VS+  +LG +++A ++     A  F
Sbjct: 251 LNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGF 310

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI-DPNVITYSTIISSLCDVGNVETSL 220
              +  YN L  GLC+  K++EAF L  EM   GI  P+V+TY+T++ +         +L
Sbjct: 311 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDAL 370

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L +M  +G   ++ +   ++KG    G+  EA      M  EG  P+V+ Y+TLI   
Sbjct: 371 NLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDAS 430

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C                                   KAGN+  A  + + M+ +G   + 
Sbjct: 431 C-----------------------------------KAGNVAKAFVLMDEMVRSGLKMDT 455

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
                ++  LC+   + +A  L+         P+ V++ T +       + + A+ L D+
Sbjct: 456 FTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDE 515

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M + +  P+I+TYN L+ GL  + ++ EA + + E+ + G+  +  TYN I+H  C+ G 
Sbjct: 516 MIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGD 575

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +AFQ   KM+    K D +T N ++   C  G++  A++L +     G+   D+I+Y 
Sbjct: 576 LEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGK-KVDVITYN 634

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L+  +C    +  A  +   M   G+ P+  T+NVL+ +L
Sbjct: 635 TLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 224/487 (45%), Gaps = 45/487 (9%)

Query: 119 AYKLLVEMGNKGCA-PDAVSYTTIVSSICKLGQVEEAREL-------AMRFGSGVSVYNA 170
           A +LL     +GC  P   +   ++S++ +         L       A+R       +N 
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L++  C +  + +A   L +M   G+ P+ +TY+T++++ C  G +  +  +L +M   G
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             P   ++ +L+  Y   G   +A+D+   M   GF P++  Y+ L  GLC  G +DEA 
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 291 SVSYQMEE-NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
            +  +ME+     P+V TY+ L+D   K      A  +   M   G   ++V +  +VK 
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC+     +A   +E M  E   P+ +T+NT I   C  G V  A  L+D+M +     +
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMD 454

Query: 410 ITTYNELLDGLLRVNRVKEAFELV-----------------------------------T 434
             T N LL  L +  R +EA EL+                                    
Sbjct: 455 TFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWD 514

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ K  +  +I TYNT++ G+   G + EA   L +++  G   D  T+NIII+AYCK+G
Sbjct: 515 EMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEG 574

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            +  A Q  +++     + PD+++  +L+ G+C  G +++A    +  + +G   +  T+
Sbjct: 575 DLEKAFQFHNKMVENS-FKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITY 633

Query: 555 NVLVRSL 561
           N L+++L
Sbjct: 634 NTLIQAL 640



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 174/358 (48%), Gaps = 7/358 (1%)

Query: 229 RGC-NPNIHSFTSLLKGYLLGGRTHEAS--DLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           RGC  P++ +  ++L        T   +  D ++ +I     PN   ++ L+H  CS G+
Sbjct: 165 RGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGT 224

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           + +A+S   +M+     P+  TY+ L++   + G L  A  +  RM   G  P    Y  
Sbjct: 225 LADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNT 284

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V    +     QA  ++E M      P+  T+N    GLC  G+VD A KL D+M+Q  
Sbjct: 285 LVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLG 344

Query: 406 CL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            + P++ TYN L+D   +  R  +A  L+ E+ + G++ ++VT+N I+ G+CR G + EA
Sbjct: 345 IVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEA 404

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLL 523
              L  M  EG   D IT+N +I A CK G V  A  L+D  +R G +   D  +  +LL
Sbjct: 405 LGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKM--DTFTLNTLL 462

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + +C     +EA   L+     G  P+  ++  ++ + F        + + D+++  K
Sbjct: 463 YNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRK 520



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 201/416 (48%), Gaps = 8/416 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+ +GV  S      ++    R G  E+AL     + E GL P V  YN ++DA  
Sbjct: 372 LLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASC 431

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                +    +   M R G++ + FT N LL  LCK  R + A +LL     +G  PD V
Sbjct: 432 KAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEV 491

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T++++  K  + E A       +  +    +S YN LI GL    K+ EA   L E+
Sbjct: 492 SYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNEL 551

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++ G+ P+  TY+ II + C  G++E +     +M      P++ +  +L+ G  L GR 
Sbjct: 552 MEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRL 611

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L+   + +G   +V+ Y+TLI  LC +  +D A+     ME     P+V TY+ L
Sbjct: 612 EKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVL 671

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL--CQNNMFHQAHSLIEKMAFE 369
           +   ++AG  + A ++ +++  +G       Y  +   +   +     +  S IE +   
Sbjct: 672 LSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNT 731

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
               +  ++N +IK LC  G++  A  +LD+M Q     + +TY  L++GL++  +
Sbjct: 732 QG-DDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 151/315 (47%), Gaps = 16/315 (5%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL+     G    E  + +V+ +Y +    E AL ++  + +  L P++  YN ++ 
Sbjct: 474 AEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIK 533

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    + +      + +   G+ P+  TYNI++ A CK   ++ A++   +M      P
Sbjct: 534 GLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP 593

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSV--YNALINGLCKEHKIEEAFWLL 188
           D V+  T+++ +C  G++E+A +L   +   G  V V  YN LI  LCK++ ++ A    
Sbjct: 594 DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF 653

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL------GQMFVRGCNPNIHSFTSLL 242
            +M  RG+ P+V TY+ ++S+L + G    +  +L      G+++ R   P+I S    +
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV 713

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           +    G      SD+ +    +G   +  +Y+  I  LC  G + EA +V  +M +    
Sbjct: 714 ET---GKDPEVKSDIESVGNTQG--DDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMS 768

Query: 303 PNVTTYSALIDGFAK 317
            + +TY  L++G  K
Sbjct: 769 VDNSTYITLMEGLIK 783


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 242/509 (47%), Gaps = 39/509 (7%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M +DG   N+ TY +L+K LCK  R+ GA ++L EM  +G  P   +Y  ++   CK G+
Sbjct: 186 MVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGR 245

Query: 151 VEEA---RELAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++A   + L  R G       YN LI GLC E K +EA  LL + + RG  P VIT++ 
Sbjct: 246 MKDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTN 304

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           II+  C    ++ +L +   M    C  ++ ++  L+   +   R  EA +  + M   G
Sbjct: 305 IINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANG 364

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNVV Y+++I G C  G +  A+ V   ME   C PN  TYS+LI G  +   L  A 
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAM 424

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +  +M  +G +P V+ YT +++  C+ + F  A  L E M      P+   +N     L
Sbjct: 425 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHAL 484

Query: 386 CGCGR--------------------------------VDWAMKLLDQMKQYECLPNITTY 413
           C  GR                                 D+A  L+++M    C  +  TY
Sbjct: 485 CKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTY 544

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + LL  L +  ++ EA  ++ ++   G++ NIV Y  I+  + + G    A  +  +M+ 
Sbjct: 545 SVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 604

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G K  A T+ + I +YCK G++  A  L+  +   G   PD+++Y   + G  + G M 
Sbjct: 605 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGV-APDVVTYNVFINGCGHMGYMD 663

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            AF  L++M++    PN+ T+ +L++   
Sbjct: 664 RAFSTLKRMIDASCEPNYWTYWILLKHFL 692



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 152/631 (24%), Positives = 278/631 (44%), Gaps = 88/631 (13%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL  M + G   +E  +  +I          +AL +   + + G    +  Y  ++  L
Sbjct: 146 WLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGL 205

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD- 134
             E R      +   M   G+ P+V+TYN ++   CK+ R+  A  +   M   GC PD 
Sbjct: 206 CKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDD 265

Query: 135 ---------------------------------AVSYTTIVSSICKLGQVEEARELAMRF 161
                                             +++T I++  CK  ++++A  +    
Sbjct: 266 WTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSM 325

Query: 162 GSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            S      +  Y  LIN L K+ + +EA   + EM   G+ PNV+ Y++II   C VG V
Sbjct: 326 LSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKV 385

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +L +   M   GC PN  +++SL+ G +   + H+A  L  +M  +G  P V+ Y+TL
Sbjct: 386 GAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 445

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPN-------------------------------- 304
           I G C     D A  +   ME+N   P+                                
Sbjct: 446 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLT 505

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY++L+DGF+KAGN   A+ +  +M++ GC  +   Y+ +++ LC+    ++A S+++
Sbjct: 506 KVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILD 565

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M       N V +   I  +   G+ D A  + ++M      P+ TTY   +    ++ 
Sbjct: 566 QMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIG 625

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +++EA  L+ E+E+ G+  ++VTYN  ++G    G +  AF  L +M+    + +  T+ 
Sbjct: 626 QIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYW 685

Query: 485 IIIYAYCKQG----------------KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
           I++  + K                  +++   QLL+R+   G  NP  ++Y+S++ G C 
Sbjct: 686 ILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHG-LNPTAVTYSSIIAGFCK 744

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           +  ++EA +    M  + I PN   + +L++
Sbjct: 745 ATRLEEACVLFDHMRGKDISPNEEIYTMLIK 775



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 246/523 (47%), Gaps = 21/523 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +KC     +  + +M   G++ +  ++ S+I+ Y +VG    AL++F  +   G
Sbjct: 340 LINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG 399

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    Y+ ++  L+ + +      + + M+ DG+ P V TY  L++  CK +  D A+
Sbjct: 400 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 459

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKE 178
           +L   M   G  PD  +Y  +  ++CK G+ EEA    +R G  ++   Y +L++G  K 
Sbjct: 460 RLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKA 519

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
              + A  L+ +MV+ G   +  TYS ++ +LC    +  +L IL QM + G   NI ++
Sbjct: 520 GNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAY 579

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           T ++   +  G+   A  ++N MI  G  P+   Y+  I   C  G ++EA  +  +ME 
Sbjct: 580 TIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMER 639

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+V TY+  I+G    G +  A     RMI   C PN   Y  ++K   + ++   
Sbjct: 640 DGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLV-D 698

Query: 359 AH-----------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           AH                  L+E+M      P  VT+++ I G C   R++ A  L D M
Sbjct: 699 AHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHM 758

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +  +  PN   Y  L+     +    +A   VT++ + G Q ++ +Y+ ++ G+C  G  
Sbjct: 759 RGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDY 818

Query: 462 VEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +A  L   +L +E    + + + I+     K G V+   QLL
Sbjct: 819 DKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLL 861



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 233/479 (48%), Gaps = 45/479 (9%)

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVSV----YNALINGLC 176
           LL+ M   GC  +  SYT ++  +C+   V EA  L  M    G S+    Y  LI GLC
Sbjct: 147 LLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLC 206

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE +I  A  +L EM  RG+ P+V TY+ +I   C  G ++ +LGI   M   GCNP+  
Sbjct: 207 KEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDW 266

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  L+ G L G +  EA +L N  I  GF P V+ ++ +I+G C    +D+A+ V   M
Sbjct: 267 TYNILIYG-LCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSM 325

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC----- 351
             ++C  ++  Y  LI+   K      A +  + M +NG +PNVV YT ++   C     
Sbjct: 326 LSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKV 385

Query: 352 ------------------------------QNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
                                         Q+   H+A +LI KM  +   P  +T+ T 
Sbjct: 386 GAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 445

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I+G C     D A +L + M+Q    P+   YN L   L +  R +EA+  +    + G+
Sbjct: 446 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLV---RKGV 502

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            L  VTY +++ G  +AG    A  L+ KM+ EG K D+ T+++++ A CKQ K+N A+ 
Sbjct: 503 VLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALS 562

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +LD++   G    +I++YT ++  +   G    A     +M++ G  P+  T+ V + S
Sbjct: 563 ILDQMTLSGV-KCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISS 620



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 264/561 (47%), Gaps = 30/561 (5%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           GEK   D  + LL    V G + +   F ++IN Y +    + AL++   +     K  +
Sbjct: 277 GEK--PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDL 334

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
           + Y  +++ L+ + RF       S M  +G+ PNV  Y  ++   CK  +V  A ++   
Sbjct: 335 QAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRL 394

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHK 180
           M ++GC P+A +Y++++  + +  ++ +A  L  +        GV  Y  LI G CK+H+
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            + AF L   M   G+ P+   Y+ +  +LC  G  E +   L +   +G      ++TS
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTYTS 511

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G+   G T  A+ L  +M+ EG   +   YS L+  LC    ++EA+S+  QM  + 
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSG 571

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              N+  Y+ +I    K G    A  ++N MIS+G  P+   YT  +   C+     +A 
Sbjct: 572 VKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 631

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            LI +M  +   P+ VT+N FI G    G +D A   L +M    C PN  TY  LL   
Sbjct: 632 HLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHF 691

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           L+++ V   +     ++  G+  N +  +T+             +QLL +M+  G    A
Sbjct: 692 LKMSLVDAHY-----VDTSGM-WNWIELDTV-------------WQLLERMVKHGLNPTA 732

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ II  +CK  ++  A  L D +R G + +P+   YT L+   C+     +A  ++ 
Sbjct: 733 VTYSSIIAGFCKATRLEEACVLFDHMR-GKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 791

Query: 541 KMLNEGICPNFATWNVLVRSL 561
            M+  G  P+  +++ L+  L
Sbjct: 792 DMIEFGFQPHLESYHYLIVGL 812



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/415 (28%), Positives = 205/415 (49%), Gaps = 38/415 (9%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           + +A WLL  M   G   N  +Y+ +I  LC+   V  +L +L  M   GC+ N+H++T 
Sbjct: 141 LRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTL 200

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+KG    GR H A  +   M   G +P+V  Y+ +I G C +G M +A+ +   ME N 
Sbjct: 201 LIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNG 260

Query: 301 CPPN----------------------------------VTTYSALIDGFAKAGNLLGASQ 326
           C P+                                  V T++ +I+G+ KA  +  A +
Sbjct: 261 CNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALR 320

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M+S+ C  ++ AY  ++ VL +   F +A   + +M      PN V + + I G C
Sbjct: 321 VKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYC 380

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+V  A+++   M+   C PN  TY+ L+ GL++  ++ +A  L+T++++ GI   ++
Sbjct: 381 KVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 440

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY T++ G C+      AF+L   M   G   D   +N++ +A CK G+   A   L  +
Sbjct: 441 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL--V 498

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           R G       ++YTSL+ G   +G    A + ++KM+NEG   +  T++VL+++L
Sbjct: 499 RKGVVLTK--VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQAL 551



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 176/348 (50%), Gaps = 2/348 (0%)

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G++  +  +L  M + GC  N +S+T L++G        EA  L   M+++G   N+  Y
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + LI GLC  G +  A  V  +M      P+V TY+A+IDG+ K+G +  A  I   M  
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           NGC+P+   Y  ++  LC      +A  L+         P  +TF   I G C   R+D 
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKP-DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+++   M    C  ++  Y  L++ L++  R KEA E V+E+   G+  N+V Y +I+ 
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C+ G V  A ++   M  EG + +A T++ +IY   +  K++ A+ L+ +++  G   
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG-IT 436

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P +I+YT+L+ G C       AF   + M   G+ P+   +NVL  +L
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHAL 484



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 35/280 (12%)

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+L  A  +   M   GC  N  +YT +++ LC+     +A  L+  M  + C  N  T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              IKGLC  GR+  A ++L++M     +P++ TYN ++DG  +  R+K+A  +   +E+
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G   +  TYN +++G+C      EA +LL   ++ G     ITF  II  YCK  ++++
Sbjct: 259 NGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 499 AIQL----------LD---------------RIRGGGE---------WNPDIISYTSLLW 524
           A+++          LD               R +   E           P+++ YTS++ 
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G C  G +  A    + M +EG  PN  T++ L+  L  +
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQD 417


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 267/534 (50%), Gaps = 13/534 (2%)

Query: 52  MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC 111
           + Y  +++G  P  ++++     L+          ++  M   G+  +V + N+ L  L 
Sbjct: 164 LVYTYKDWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLS 221

Query: 112 KN-NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGV 165
           K+  +   A  +  E    G   +  SY  ++  +C+LG+++EA  L +      +   V
Sbjct: 222 KDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 281

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y+ ++NG C+  ++++ + L+  M  +G+ PN   Y +II  LC +  +  +     +
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +G  P+   +T+L+ G+   G    AS  +  M      P+V+ Y+ +I G C  G 
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           M EA  + ++M      P+  T++ LI+G+ KAG++  A ++ N MI  GCSPNVV YT 
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+      A+ L+ +M      PN  T+N+ + GLC  G ++ A+KL+ + +   
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
              +  TY  L+D   +   + +A E++ E+   G+Q  IVT+N +++G C  GM+ +  
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNPDIISYTSLL 523
           +LL  ML +G   +A TFN ++  YC +  +  A  +   +  RG G   PD  +Y +L+
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG---PDGKTYENLV 638

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
            G C +  M+EA+   Q+M  +G   + +T++VL++        L    + D +
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 240/467 (51%), Gaps = 5/467 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+ +F    E G+   V  YN ++  +    R    + +   M+  G  P+V +Y+ ++ 
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS---SICKLGQVEEARELAMRFG--S 163
             C+   +D  +KL+  M  KG  P++  Y +I+     ICKL + EEA    +R G   
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
              VY  LI+G CK   I  A     EM  R I P+V+TY+ IIS  C +G++  +  + 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +MF +G  P+  +FT L+ GY   G   +A  + N MI+ G  PNVV Y+TLI GLC  
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G +D A  + ++M +    PN+ TY+++++G  K+GN+  A ++     + G + + V Y
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T ++   C++    +A  ++++M  +   P  VTFN  + G C  G ++   KLL+ M  
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN TT+N L+      N +K A  +  ++   G+  +  TY  ++ G C+A  + E
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           A+ L  +M  +G  +   T++++I  + K+ K   A ++ D++R  G
Sbjct: 650 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 231/476 (48%), Gaps = 5/476 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VI+   ++G  ++A  +   +   G  P V  Y+ +++          +  +   MKR G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++PN + Y  ++  LC+  ++  A +   EM  +G  PD V YTT++   CK G +  A 
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +      S      V  Y A+I+G C+   + EA  L  EM  +G++P+ +T++ +I+  
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G+++ +  +   M   GC+PN+ ++T+L+ G    G    A++L + M + G  PN+
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+++++GLC +G+++EAV +  + E      +  TY+ L+D + K+G +  A +I   
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M+  G  P +V +  ++   C + M      L+  M  +   PN  TFN+ +K  C    
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A  +   M      P+  TY  L+ G  +   +KEA+ L  E++  G  +++ TY+ 
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           ++ G  +    +EA ++  +M  EG   D   F+       K  + +  +  +D I
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 215/437 (49%), Gaps = 5/437 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            I    +LL  M+++G +     + +V+N Y R G  ++  K+   ++  GLKP   IY 
Sbjct: 261 RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYG 320

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+  L    + +     +S M R G+ P+   Y  L+   CK   +  A K   EM ++
Sbjct: 321 SIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEA 184
              PD ++YT I+S  C++G + EA +L    F  G+      +  LING CK   +++A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F +   M+  G  PNV+TY+T+I  LC  G+++++  +L +M+  G  PNI ++ S++ G
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G   EA  L       G   + V Y+TL+   C +G MD+A  +  +M      P 
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ L++GF   G L    ++ N M++ G +PN   +  +VK  C  N    A ++ +
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M      P+  T+   +KG C    +  A  L  +MK      +++TY+ L+ G L+  
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680

Query: 425 RVKEAFELVTEIEKCGI 441
           +  EA E+  ++ + G+
Sbjct: 681 KFLEAREVFDQMRREGL 697



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 187/398 (46%), Gaps = 5/398 (1%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C++   +    +M  +G+     V+ ++I+ + + G    A K FY +    + P V  Y
Sbjct: 330 CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             I+              ++  M   G+EP+  T+  L+   CK   +  A+++   M  
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEE 183
            GC+P+ V+YTT++  +CK G ++ A EL      +     +  YN+++NGLCK   IEE
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L+ E    G++ + +TY+T++ + C  G ++ +  IL +M  +G  P I +F  L+ 
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G+ L G   +   L N M+ +G  PN   +++L+   C   ++  A ++   M      P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY  L+ G  KA N+  A  ++  M   G S +V  Y+ ++K   +   F +A  + 
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           ++M  E    +   F+ F        R D  +  +D++
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ +I        +M    ++     + ++I+ + ++G   +A K+F+ +   G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P    +  +++             ++++M + G  PNV TY  L+  LCK   +D A 
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           +LL EM   G  P+  +Y +IV+ +CK G +EEA +L   F +         Y  L++  
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++++A  +L EM+ +G+ P ++T++ +++  C  G +E    +L  M  +G  PN 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F SL+K Y +      A+ ++  M   G  P+   Y  L+ G C   +M EA  +  +
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           M+      +V+TYS LI GF K    L A +++++M   G + +
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 257/509 (50%), Gaps = 7/509 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           E G + +   Y+ +L  L   N   +   +Y  M  +G       Y  ++ ALCKN  V 
Sbjct: 129 ELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQ 188

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNAL 171
            A     ++   G   D    T++V + C+   + EA  +  +             Y+ L
Sbjct: 189 AAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSIL 248

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+GLC+  ++EEAF L  EMV++G  P+  TY+ +I + CD+G  + ++ +L +M  + C
Sbjct: 249 IHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKAC 308

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN+H++T L+      G+  EA+ ++ +M++ G  P ++ ++ LI+G C  G +  A  
Sbjct: 309 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 368

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   ME+ +C PN+ TY+ L++G  +      A  +  R++ NG  P+ V Y  +V   C
Sbjct: 369 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 428

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +    + A ++   M      P+  TF   I GLC  GR++ A  +L  M +     +  
Sbjct: 429 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 488

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+  L+DG  ++ + K+   L   + +        T+N  L  + +   + EA  +LGKM
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 548

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +  G     +T  I+I  +C+ G+   ++++L+R++  G  +P++ +YT ++ G+CN+G 
Sbjct: 549 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG-CSPNVYTYTIIINGLCNNGR 607

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++EA   L  M + G+ PN  T+ VLV++
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKA 636



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/587 (26%), Positives = 281/587 (47%), Gaps = 49/587 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   ++    L Q+M  +G   S   +  +I +   +G+ ++A+KM   +    
Sbjct: 248 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 307

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L  E +    N ++  M + G+ P + T+N L+   CK   V  A+
Sbjct: 308 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 367

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGV----SVYNALINGL 175
           +LL  M    C P+  +Y  ++  +C++ +  +A  L  R   +G+      YN L++G 
Sbjct: 368 QLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 427

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++  AF +   M   G++P+  T++ +I  LC +G +E + GILG M  +G + + 
Sbjct: 428 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 487

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT+L+ G+   G+  +   L+  M+    L     ++  +  L  +  ++EA ++  +
Sbjct: 488 VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 547

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+V T++ LI+G  +AG    + ++  RM   GCSPNV  YT ++  LC N  
Sbjct: 548 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 607

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +++  M+     PN  T+   +K     GR+D A +++  M +  C PN   Y+ 
Sbjct: 608 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 667

Query: 416 LLDG-------------------------------------LLRVNRVKEAFELVTEIEK 438
           LL G                                     + R+  V  A ++  EI+K
Sbjct: 668 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKK 727

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
           CG+    + YN ++ G+C+ G ++EA QL   M+  G   D    +II + YCK  K +N
Sbjct: 728 CGVPTEDL-YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCKTCKYDN 785

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
            ++ + ++    ++ P   SY  ++ G+ N G +QEA    QK++++
Sbjct: 786 CLEFM-KLVLDNKFVPSFASYCWVIHGLRNEGRVQEA----QKLVSD 827



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 250/501 (49%), Gaps = 9/501 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM- 91
           + +V+N+  + G  + A     ++   G      +   ++ A    +       ++  M 
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 233

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K +   PN  TY+IL+  LC+  R++ A++L  EM  KGC P   +YT ++ + C +G  
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 293

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A ++     +      V  Y  LI+ LC+E KIEEA  +  +M+  G+ P +IT++ +
Sbjct: 294 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 353

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C  G V ++  +L  M    C PNI ++  L++G     ++++A  L  R++  G 
Sbjct: 354 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+ V Y+ L+ G C  G ++ A ++   M      P+  T++ALIDG  K G L  A+ 
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I   M+  G S + V +T ++   C+         L E M    C     TFN F+  L 
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 533

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +++ A  +L +M +Y  +P++ T+  L++G  R      + +++  +++ G   N+ 
Sbjct: 534 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 593

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR- 505
           TY  I++G+C  G V EA  +L  M   G   +  T+ +++ A+ K G+++ A Q++   
Sbjct: 594 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 653

Query: 506 IRGGGEWNPDIISYTSLLWGI 526
           ++ G + N  I  Y++LL G 
Sbjct: 654 VKNGCQPNSHI--YSALLSGF 672



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 241/468 (51%), Gaps = 7/468 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----REL 157
           Y+ LL  L K N    A+ +   M N+G     + Y T+V+++CK G V+ A     + L
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNV 216
            + FG    V  +L+   C+   + EAF +  +M  +    PN +TYS +I  LC+ G +
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 258

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +  +  +M  +GC P+  ++T L+K     G T +A  + + M  +  +PNV  Y+ L
Sbjct: 259 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 318

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC  G ++EA  V  +M ++   P + T++ALI+G+ K G ++ A Q+ + M    C
Sbjct: 319 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 378

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN+  Y  +++ LC+ +  ++A  L+ ++      P+ VT+N  + G C  G+++ A  
Sbjct: 379 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 438

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + + M      P+  T+  L+DGL ++ R+++A  ++  + K GI L+ VT+  ++ G C
Sbjct: 439 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 498

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G   +   L   M+       A TFN  + A  K  K+N A  +L ++   G   P +
Sbjct: 499 KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG-LVPSV 557

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +++T L+ G C +G    +   L++M   G  PN  T+ +++  L +N
Sbjct: 558 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 605



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/570 (26%), Positives = 260/570 (45%), Gaps = 56/570 (9%)

Query: 36  VINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           V+ + RR  L E A ++F ++ +E   +P    Y+ ++  L    R      +   M   
Sbjct: 213 VLANCRRDDLGE-AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G +P+  TY +L+KA C     D A K+L EM  K C P+  +YT ++  +C+ G++EEA
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331

Query: 155 ----REL---------------------------------AMRFGS---GVSVYNALING 174
               R++                                  M  G+    +  YN L+ G
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+  K  +AF LL  +VD G+ P+ +TY+ ++   C  G +  +  I   M   G  P+
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +FT+L+ G    GR  +A+ +   M+++G   + V ++ LI G C  G   +   +  
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M EN C     T++  +D   K   L  A+ +  +M+  G  P+VV +T +++  C+  
Sbjct: 512 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 571

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               +  ++E+M    C PN  T+   I GLC  GRV+ A  +L  M  +   PN  TY 
Sbjct: 572 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 631

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+   ++  R+  AF++V+ + K G Q N   Y+ +L     +G V+    +  + L  
Sbjct: 632 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL-----SGFVLSNTAIGARALSS 686

Query: 475 GTKLDAITF-------NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              LDA +        N +     +   V++A+++ D I+  G    D+  Y  L+ G+C
Sbjct: 687 TGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL--YNFLVVGLC 744

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
             G + EA    Q M+  G+ P+ A  +++
Sbjct: 745 KEGRIIEADQLTQDMVKHGLFPDKAISSII 774



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 182/407 (44%), Gaps = 45/407 (11%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG   + +G+   L  M  +G+S  E  F ++I+ + ++G A+    +F  + E     
Sbjct: 464 KLGRLEQANGI---LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           T   +N  LDAL  + + +  N +   M + G+ P+V T+ IL++  C+      + K+L
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
             M   GC+P+  +YT I++ +C  G+VEEA                             
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET--------------------------- 613

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              +L  M   G+ PN  TY+ ++ +    G ++ +  I+  M   GC PN H +++LL 
Sbjct: 614 ---ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 670

Query: 244 GYLL-----GGRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           G++L     G R   ++ DL  R +      N    S +   +     +D A+ +  +++
Sbjct: 671 GFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLM----DVDHALKIRDEIK 726

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +   P     Y+ L+ G  K G ++ A Q+   M+ +G  P+  A + +++  C+   + 
Sbjct: 727 KCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYD 784

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
                ++ +      P+  ++   I GL   GRV  A KL+  + ++
Sbjct: 785 NCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 831



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           M  LD M +     +   Y+ LL  L ++N    AF +   +   G  L  + Y T+++ 
Sbjct: 121 MGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNA 180

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ G V  A     K+L  G  LD      ++ A C++  +  A ++ +++       P
Sbjct: 181 LCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRP 240

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           + ++Y+ L+ G+C +G ++EAF   Q+M+ +G  P+  T+ VL+++   ++G       +
Sbjct: 241 NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK-CDIGMTDKAMKM 299

Query: 575 DDIMANK 581
            D MA K
Sbjct: 300 LDEMATK 306



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 43/239 (17%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ++  + +L  M   GVS +   +  ++ ++ + G  ++A ++   + + G +P   IY+
Sbjct: 607 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 666

Query: 70  HILDALLAENR--------------------------------FSMINPIYSNMKRDGME 97
            +L   +  N                                 F +++  ++   RD ++
Sbjct: 667 ALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIK 726

Query: 98  ----PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
               P    YN L+  LCK  R+  A +L  +M   G  PD  + ++I+   CK  + + 
Sbjct: 727 KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDN 785

Query: 154 ARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTI 206
             E     L  +F    + Y  +I+GL  E +++EA  L+ ++V   GI+  V    +I
Sbjct: 786 CLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPSI 844


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 258/509 (50%), Gaps = 7/509 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           E G + +   Y+ +L  L   N   +   +Y  M  +G       Y  ++ ALCKN  V 
Sbjct: 152 ELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQ 211

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS------VYNAL 171
            A     ++   G   D    T++V + C+   + EA  +  +     +       Y+ L
Sbjct: 212 AAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSIL 271

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+GLC+  ++EEAF L  EMV++G  P+  TY+ +I + CD+G  + ++ +L +M  + C
Sbjct: 272 IHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKAC 331

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN+H++T L+      G+  EA+ ++ +M++ G  P ++ ++ LI+G C  G +  A  
Sbjct: 332 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 391

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +   ME+ +C PN+ TY+ L++G  +      A  +  R++ NG  P+ V Y  +V   C
Sbjct: 392 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 451

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +    + A ++   M      P+  TF   I GLC  GR++ A  +L  M +     +  
Sbjct: 452 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 511

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+  L+DG  ++ + K+   L   + +        T+N  L  + +   + EA  +LGKM
Sbjct: 512 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 571

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +  G     +T  I+I  +C+ G+   ++++L+R++  G  +P++ +YT ++ G+CN+G 
Sbjct: 572 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG-CSPNVYTYTIIINGLCNNGR 630

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++EA   L  M + G+ PN  T+ VLV++
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKA 659



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 279/571 (48%), Gaps = 33/571 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   ++    L Q+M  +G   S   +  +I +   +G+ ++A+KM   +    
Sbjct: 271 LIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKA 330

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L  E +    N ++  M + G+ P + T+N L+   CK   V  A+
Sbjct: 331 CVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAF 390

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGV----SVYNALINGL 175
           +LL  M    C P+  +Y  ++  +C++ +  +A  L  R   +G+      YN L++G 
Sbjct: 391 QLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGF 450

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++  AF +   M   G++P+  T++ +I  LC +G +E + GILG M  +G + + 
Sbjct: 451 CKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDE 510

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT+L+ G+   G+  +   L+  M+    L     ++  +  L  +  ++EA ++  +
Sbjct: 511 VTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGK 570

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+V T++ LI+G  +AG    + ++  RM   GCSPNV  YT ++  LC N  
Sbjct: 571 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 630

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A +++  M+     PN  T+   +K     GR+D A +++  M +  C PN   Y+ 
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 690

Query: 416 LLDGLLRVNRVKEAFELVT---------------------EIEKCGIQLNIVTYNTILHG 454
           LL G +  N    A  L +                     EI+KCG+    + YN ++ G
Sbjct: 691 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL-YNFLVVG 749

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ G ++EA QL   M+  G   D    +II + YCK  K +N ++ + ++    ++ P
Sbjct: 750 LCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEH-YCKTCKYDNCLEFM-KLVLDNKFVP 807

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
              SY  ++ G+ N G +QEA    QK++++
Sbjct: 808 SFASYCWVIHGLRNEGRVQEA----QKLVSD 834



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 250/501 (49%), Gaps = 9/501 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM- 91
           + +V+N+  + G  + A     ++   G      +   ++ A    +       ++  M 
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMS 256

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K +   PN  TY+IL+  LC+  R++ A++L  EM  KGC P   +YT ++ + C +G  
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 316

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A ++     +      V  Y  LI+ LC+E KIEEA  +  +M+  G+ P +IT++ +
Sbjct: 317 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C  G V ++  +L  M    C PNI ++  L++G     ++++A  L  R++  G 
Sbjct: 377 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 436

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+ V Y+ L+ G C  G ++ A ++   M      P+  T++ALIDG  K G L  A+ 
Sbjct: 437 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 496

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I   M+  G S + V +T ++   C+         L E M    C     TFN F+  L 
Sbjct: 497 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 556

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +++ A  +L +M +Y  +P++ T+  L++G  R      + +++  +++ G   N+ 
Sbjct: 557 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 616

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR- 505
           TY  I++G+C  G V EA  +L  M   G   +  T+ +++ A+ K G+++ A Q++   
Sbjct: 617 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 676

Query: 506 IRGGGEWNPDIISYTSLLWGI 526
           ++ G + N  I  Y++LL G 
Sbjct: 677 VKNGCQPNSHI--YSALLSGF 695



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 259/547 (47%), Gaps = 26/547 (4%)

Query: 36  VINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           V+ + RR  L E A ++F ++ +E   +P    Y+ ++  L    R      +   M   
Sbjct: 236 VLANCRRDDLGE-AFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G +P+  TY +L+KA C     D A K+L EM  K C P+  +YT ++  +C+ G++EEA
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354

Query: 155 -----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                + L      G+  +NALING CKE  +  AF LL  M      PN+ TY+ ++  
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC V     +  +L ++   G  P+  ++  L+ G+   G+ + A +++N M   G  P+
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
              ++ LI GLC  G +++A  +   M +     +  T++ALIDG  K G       ++ 
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 534

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+ N C      + C +  L ++   ++A++++ KM      P+ VT    I+G C  G
Sbjct: 535 NMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAG 594

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
               ++K+L++MKQ  C PN+ TY  +++GL    RV+EA  ++  +   G+  N  TY 
Sbjct: 595 ETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYA 654

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-----LD 504
            ++    +AG +  AFQ++  M+  G + ++  ++ ++  +        A  L     LD
Sbjct: 655 VLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLD 714

Query: 505 RIRGGGEWN--------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
                 E N              P    Y  L+ G+C  G + EA    Q M+  G+ P+
Sbjct: 715 ARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 774

Query: 551 FATWNVL 557
            A  +++
Sbjct: 775 KAISSII 781



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 241/468 (51%), Gaps = 7/468 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----REL 157
           Y+ LL  L K N    A+ +   M N+G     + Y T+V+++CK G V+ A     + L
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNV 216
            + FG    V  +L+   C+   + EAF +  +M  +    PN +TYS +I  LC+ G +
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRL 281

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +  +  +M  +GC P+  ++T L+K     G T +A  + + M  +  +PNV  Y+ L
Sbjct: 282 EEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 341

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC  G ++EA  V  +M ++   P + T++ALI+G+ K G ++ A Q+ + M    C
Sbjct: 342 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 401

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN+  Y  +++ LC+ +  ++A  L+ ++      P+ VT+N  + G C  G+++ A  
Sbjct: 402 KPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFN 461

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + + M      P+  T+  L+DGL ++ R+++A  ++  + K GI L+ VT+  ++ G C
Sbjct: 462 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHC 521

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G   +   L   M+       A TFN  + A  K  K+N A  +L ++   G   P +
Sbjct: 522 KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG-LVPSV 580

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +++T L+ G C +G    +   L++M   G  PN  T+ +++  L +N
Sbjct: 581 VTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNN 628



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 176/410 (42%), Gaps = 67/410 (16%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG   + +G+   L  M  +G+S  E  F ++I+ + ++G A+    +F  + E     
Sbjct: 487 KLGRLEQANGI---LGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           T   +N  LDAL  + + +  N +   M + G+ P+V T+ IL++  C+      + K+L
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
             M   GC+P+  +YT I++ +C  G+VEEA                             
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET--------------------------- 636

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              +L  M   G+ PN  TY+ ++ +    G ++ +  I+  M   GC PN H +++LL 
Sbjct: 637 ---ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 693

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC-- 301
           G++L      A                         L S G +D A S+S +  +N+C  
Sbjct: 694 GFVLSNTAIGA-----------------------RALSSTGDLD-ARSLSSEENDNNCLS 729

Query: 302 -------PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
                   P    Y+ L+ G  K G ++ A Q+   M+ +G  P+  A + +++  C+  
Sbjct: 730 NEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTC 788

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            +      ++ +      P+  ++   I GL   GRV  A KL+  + ++
Sbjct: 789 KYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 838



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 28/290 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++ LG+  +++    +L +M   G+  S      +I  + R G    +LKM  R+++ G
Sbjct: 551 FLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAG 610

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  I++ L    R      I  +M   G+ PN FTY +L+KA  K  R+D A+
Sbjct: 611 CSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAF 670

Query: 121 KLLVEMGNKGCAPDAVSYTTIVS------------SICKLGQVEEARELAMRFGS----- 163
           +++  M   GC P++  Y+ ++S            ++   G + +AR L+          
Sbjct: 671 QIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDL-DARSLSSEENDNNCLS 729

Query: 164 ------GV---SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                 GV    +YN L+ GLCKE +I EA  L  +MV  G+ P+    S+II   C   
Sbjct: 730 NEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTC 788

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
             +  L  +  +      P+  S+  ++ G    GR  EA  L + ++R 
Sbjct: 789 KYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRH 838



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 1/187 (0%)

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           M  LD M +     +   Y+ LL  L ++N    AF +   +   G  L  + Y T+++ 
Sbjct: 144 MGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNA 203

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ G V  A     K+L  G  LD      ++ A C++  +  A ++ +++       P
Sbjct: 204 LCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRP 263

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           + ++Y+ L+ G+C +G ++EAF   Q+M+ +G  P+  T+ VL+++   ++G       +
Sbjct: 264 NSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK-CDIGMTDKAMKM 322

Query: 575 DDIMANK 581
            D MA K
Sbjct: 323 LDEMATK 329


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 241/453 (53%), Gaps = 5/453 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P +   + ++  +  E +      ++  M R G + ++  Y  L+ AL K  +   A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLG----QVEEARELA-MRFGSGVSVYNALING 174
            +L   M ++ C+ +  +Y  ++ S+CK G     ++  RE+  M     V VY++LING
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+  K+ EA  L  EMV +GI  NVITY+++I + C  G  + +     QM   G  P+
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +FT+L+      G+  EA  ++  MI++G  PN+V Y++L++GLC +  MD AV +  
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M E     +V +Y+ LI+G+  +G    A  ++ +M     +P++  YT ++K L QN 
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A  L   M      P+  T+   + GLC  G ++ A+ +   +K  +  P+I  Y+
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYS 363

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G+ +  R + A E+  EI   G+  NIVTYN +++G+C+ G ++EA +L  +M   
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEES 423

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           G + D I+FN II  + ++ +V  A++ L R+R
Sbjct: 424 GCEQDEISFNFIIRGFLQENQVQKAMEFLKRMR 456



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 231/433 (53%), Gaps = 5/433 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G    AL++F ++   G +  + +Y ++++AL    +      ++  M  +    N FTY
Sbjct: 23  GKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTY 82

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----A 158
            +++ +LCK+       K+  EM N G  P+ + Y+++++ +C++G++ EA  L     +
Sbjct: 83  GLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVS 142

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
               + V  YN+LI+  C+    +EA     +MV  GI P+V+T++T+I  L   G V+ 
Sbjct: 143 QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQE 202

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  I   M  +G  PNI ++ SLL G  L  +   A  L+  M+  G   +V++Y+TLI+
Sbjct: 203 AYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLIN 262

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C++G  +EA+++  +M+     P++TTY+ L+    + G +  A +++N M   G SP
Sbjct: 263 GYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSP 322

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++  YT ++  LC+N    +A  +   +      P+   ++  I G+    R + AM++ 
Sbjct: 323 SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIF 382

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D++     +PNI TYN +++GL +  ++ EA  L  ++E+ G + + +++N I+ G  + 
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442

Query: 459 GMVVEAFQLLGKM 471
             V +A + L +M
Sbjct: 443 NQVQKAMEFLKRM 455



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 202/379 (53%), Gaps = 5/379 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VI+S  + GLA + LKMF  +   G+ P V +Y+ +++ L    +      ++  M   G
Sbjct: 85  VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++ NV TYN L+ A C+      A +   +M  +G  PD V++TT++  + K G+V+EA 
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAY 204

Query: 156 ---ELAMRFGSG--VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
              EL ++ G    +  YN+L+NGLC  H+++ A  L   MV+RGI  +VI+Y+T+I+  
Sbjct: 205 KIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGY 264

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  E ++ +  +M      P+I ++T LLK     GR   A +L+N M   G  P++
Sbjct: 265 CTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSL 324

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ L+ GLC NG ++EA+ V   ++     P++  YS LI G  +A     A +I++ 
Sbjct: 325 DTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDE 384

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           + + G  PN+V Y  M+  LC+     +A  L  +M    C  + ++FN  I+G     +
Sbjct: 385 IPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQ 444

Query: 391 VDWAMKLLDQMKQYECLPN 409
           V  AM+ L +M++    PN
Sbjct: 445 VQKAMEFLKRMREKNFSPN 463



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 215/439 (48%), Gaps = 6/439 (1%)

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V+ +T+V  +C  G+V +A EL  +     F   + +Y  LIN L K  +   A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M+      N  TY  +I SLC  G     L +  +M   G  PN+  ++SL+ G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  EA +L++ M+ +G   NV+ Y++LIH  C  G   EA     QM      P+
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V T++ LID  +K G +  A +I+  MI  G +PN+V Y  ++  LC ++    A  L E
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M       + +++NT I G C  G+ + AM L  +M+  E  P+ITTY  LL  L +  
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R++ A EL   ++ CG   ++ TY  +L G+C+ G + EA  +   +     K     ++
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYS 363

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           I+I    +  +  +A+++ D I   G   P+I++Y  ++ G+C  G + EA     +M  
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVG-LVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422

Query: 545 EGICPNFATWNVLVRSLFS 563
            G   +  ++N ++R    
Sbjct: 423 SGCEQDEISFNFIIRGFLQ 441



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 196/388 (50%), Gaps = 11/388 (2%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG----- 249
           G  PN++T ST++  +C  G V  +L +  +M   G   +I     LL GYL+       
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDI-----LLYGYLINALRKTR 58

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +   A +L  RM+ E    N   Y  +I  LC +G   + + +  +M      PNV  YS
Sbjct: 59  QARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYS 118

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +LI+G  + G L  A  +++ M+S G   NV+ Y  ++   C+  ++ +A     +M  E
Sbjct: 119 SLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGE 178

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VTF T I  L   G+V  A K+ + M +    PNI TYN LL+GL   +++  A
Sbjct: 179 GILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHA 238

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L   + + GI++++++YNT+++G C +G   EA  L  KM  E       T+ I++ A
Sbjct: 239 VRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKA 298

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
             + G++  A +L + ++  G+ +P + +YT LL G+C +G ++EA    + + +    P
Sbjct: 299 LYQNGRIRTAKELFNNMQICGQ-SPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKP 357

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +   +++L+  +F        + I D+I
Sbjct: 358 SIRIYSILIGGMFQARRWESAMEIFDEI 385



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 160/303 (52%), Gaps = 1/303 (0%)

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           ++ G+ PN+V  STL+ G+C  G + +A+ +  +M  +    ++  Y  LI+   K    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++  RM+S  CS N   Y  ++  LC++ +  +   +  +M      PN + +++ 
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GLC  G++  A+ L D+M       N+ TYN L+    R    KEA    +++   GI
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++VT+ T++  + + G V EA+++   M+ +G   + +T+N ++   C   ++++A++
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L + +   G    D+ISY +L+ G C SG  +EA    +KM  E + P+  T+ +L+++L
Sbjct: 241 LFEVMVERG-IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 562 FSN 564
           + N
Sbjct: 300 YQN 302



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 163/328 (49%), Gaps = 5/328 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+  +   + S+I++  R GL ++A + F ++   G+ P V  +  ++D L 
Sbjct: 136 LFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLS 195

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      I+  M + G  PN+ TYN LL  LC ++++D A +L   M  +G   D +
Sbjct: 196 KKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVI 255

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T+++  C  G+ EEA  L  +         ++ Y  L+  L +  +I  A  L   M
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P++ TY+ ++  LC  G +E ++ +   +      P+I  ++ L+ G     R 
Sbjct: 316 QICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRW 375

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A ++++ +   G +PN+V Y+ +I+GLC  G + EA  +  QMEE+ C  +  +++ +
Sbjct: 376 ESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFI 435

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPN 339
           I GF +   +  A +   RM     SPN
Sbjct: 436 IRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 141/274 (51%), Gaps = 5/274 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +K ++     + + M  +G + +   + S++N        + A+++F  + E G
Sbjct: 190 LIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERG 249

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  V  YN +++      +      ++  M+ + + P++ TY ILLKAL +N R+  A 
Sbjct: 250 IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAK 309

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +L   M   G +P   +YT ++  +CK G +EEA ++     ++++   + +Y+ LI G+
Sbjct: 310 ELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGM 369

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +  + E A  +  E+   G+ PN++TY+ +I+ LC  G +  +  +  QM   GC  + 
Sbjct: 370 FQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDE 429

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            SF  +++G+L   +  +A +   RM  + F PN
Sbjct: 430 ISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 13/272 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L + M   G+      + ++IN Y   G  E+A+ +F +++   L P++  Y 
Sbjct: 234 QMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYT 293

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L AL    R      +++NM+  G  P++ TY +LL  LCKN  ++ A  +   + + 
Sbjct: 294 ILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSI 353

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
              P    Y+ ++  + +  + E A E+      +     +  YN +INGLCKE K+ EA
Sbjct: 354 KYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEA 413

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  +M + G + + I+++ II        V+ ++  L +M  +  +PN      L+  
Sbjct: 414 ERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNL 473

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           Y        A+D  +  +   FL  +V   TL
Sbjct: 474 Y--------AADAQSSELPNNFLHELVQKKTL 497



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 5/178 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   I   + L   M++ G S S   +  +++   + G  E+A+ +F  ++   
Sbjct: 295 LLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIK 354

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP+++IY+ ++  +    R+     I+  +   G+ PN+ TYNI++  LCK  ++  A 
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAE 414

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALIN 173
           +L V+M   GC  D +S+  I+    +  QV++A E   R     F    SV   L+N
Sbjct: 415 RLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVN 472


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 252/504 (50%), Gaps = 18/504 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +LQ++K   +  S   F  +I +Y   G+ E+A++ F  +R+F  KP +  +N IL  L+
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLV 174

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +  F +   +Y+ M +  + P+V TY IL+  LCK  +   A  L  EM ++G  P+ +
Sbjct: 175 RKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQI 234

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y+ ++S +C+  ++ +A+ L  +   SG +     YN L+NG CK   +++AF LL  +
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G    VI Y  +I+ L      E +     +M      P++  +T +++G    GR 
Sbjct: 295 TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L   M   G  P+ + Y+ LI G C  G +DEA S+  ++ ++ C PN  TYS L
Sbjct: 355 TEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G  K G +  A  I+  M   GC P+VV +  ++  LC+ N   +A  L  +M     
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRK 474

Query: 372 PP-------------NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           P              +  +    ++ LC  G +  A KLL Q+     LP+I TYN L++
Sbjct: 475 PSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILIN 534

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G  +   +  AF+L  E++  G   + VTY T++ G+ RAG   +A ++  +M+ +G   
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594

Query: 479 DAITFNIIIYAYCKQGKVNNAIQL 502
           ++ T+  I+   C++  ++ A+ +
Sbjct: 595 ESSTYKTIMTWSCRENNISLALSV 618



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 259/514 (50%), Gaps = 27/514 (5%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           + + I+  L+ EN F +   +   +K   ++ +   +++L++A  +    + A +    M
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM 154

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---------RFGSGVSVYNALINGLCK 177
            +  C PD  ++  I+  + +    +EA  LA+              V  Y  LI+GLCK
Sbjct: 155 RDFDCKPDLFAFNLILHFLVR----KEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCK 210

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             K ++A  L  EM DRGI PN I YS ++S LC    +  +  +  +M   GCN ++ +
Sbjct: 211 TCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT 270

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +  LL G+   G   +A  L   + ++G +  V+ Y  LI+GL      +EA     +M 
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             +  P+V  Y+ +I G ++ G +  A  +   M   G  P+ + Y  ++K  C      
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A SL  +++  +C PN  T++  I G+C  G ++ A  +  +M++  CLP++ T+N L+
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 418 DGLLRVNRVKEAFELVTEIE---KCGIQL----------NIVTYNTILHGVCRAGMVVEA 464
           +GL + NR++EA  L  ++E   K  + L          +I +   ++  +C +GM+++A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           ++LL +++  G   D  T+NI+I  +CK G +N A +L   ++  G   PD ++Y +L+ 
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHM-PDSVTYGTLID 569

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G+  +G  ++A    ++M+ +G  P  +T+  ++
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 239/477 (50%), Gaps = 19/477 (3%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE---LAMR 160
           ++++  L K N  +  +K+L E+ N      + +++ ++ +  + G  E+A E   L   
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 161 FG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           F     +  +N +++ L ++     A  +  +M+   ++P+V+TY  +I  LC     + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L +  +M  RG  PN   ++ +L G     +  +A  L+++M   G   +++ Y+ L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C +G +D+A ++   + ++     V  Y  LI+G  +A     A   + +M+     P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V+ YT M++ L Q     +A +L+ +M      P+T+ +N  IKG C  G +D A  L 
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLR 396

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++ +++C PN  TY+ L+ G+ +   + +A  +  E+EK G   ++VT+N++++G+C+A
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKA 456

Query: 459 GMVVEAFQLLGKM-----------LIEGTK--LDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             + EA  L  +M           L +GT    D  +  +++   C+ G +  A +LL +
Sbjct: 457 NRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +   G   PDI +Y  L+ G C  G +  AF   ++M  +G  P+  T+  L+  L+
Sbjct: 517 LVDSGVL-PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/524 (23%), Positives = 232/524 (44%), Gaps = 29/524 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   Q L  +M+  G +     +  ++N + + G  + A  +   + + G    V  Y 
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYG 307

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L    R+   +  Y  M R+ ++P+V  Y I+++ L +  RV  A  LL EM  +
Sbjct: 308 CLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  PD + Y  ++   C +G ++EA  L +             Y+ LI G+CK   I +A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM--------FVR---GCNP 233
             +  EM   G  P+V+T++++I+ LC    +E +  +  QM        F+R   G + 
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487

Query: 234 --NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             +I S   +++     G   +A  L  +++  G LP++  Y+ LI+G C  G+++ A  
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFK 547

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M+     P+  TY  LIDG  +AG    A +I+ +M+  GC P    Y  ++   C
Sbjct: 548 LFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607

Query: 352 QNNMFHQAHSLIEKM-----AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           + N    A S+  K       +E+     V  +   + L    R    M +  + K ++ 
Sbjct: 608 RENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDI--KSKNFDL 665

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P    Y   L GL++  R  EAF + + ++   + ++  +   ++  +C    +  A  
Sbjct: 666 AP----YTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMD 721

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +    L  G +L     N ++       + ++A+ L +R+   G
Sbjct: 722 VFLFTLERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASG 765



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 77/151 (50%), Gaps = 1/151 (0%)

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           T  + ++  L++ N  +  ++++ E++   I+++   ++ ++     AGM  +A +    
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSL 153

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M     K D   FN+I++   ++     A+ + +++      NPD+++Y  L+ G+C + 
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN-LNPDVVTYGILIHGLCKTC 212

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             Q+A +   +M + GI PN   +++++  L
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGL 243


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 277/563 (49%), Gaps = 7/563 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E L    +I+ + Y+   M+   +      ++++       G   QA     ++REFG
Sbjct: 126 MLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFG 185

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                  YN ++  LL     +    +Y  M  DG  P++ TY+ L+  L K   ++   
Sbjct: 186 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVM 245

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL EM   G  P+  ++T  +  + + G++ EA E+  R      G  V  Y  LI+ L
Sbjct: 246 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 305

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   K++ A  +  +M      P+ +TY T++    D  ++++      +M   G  P++
Sbjct: 306 CTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDV 365

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT L+      G   EA    + M  +G LPN+  Y+TLI GL     +D+A+ +   
Sbjct: 366 VTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDN 425

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME     P   TY   ID + K+G+ + A + + +M + G +PN+VA    +  L +   
Sbjct: 426 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 485

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  +   +      P++VT+N  +K     G +D A+KLL +M +  C P++   N 
Sbjct: 486 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNS 545

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++ L + +RV EA+++   +++  ++  +VTYNT+L G+ + G + EA +L   M+ +G
Sbjct: 546 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 605

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + ITFN +    CK  +V  A+++L ++   G   PD+ +Y ++++G+  +G ++EA
Sbjct: 606 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG-CVPDVFTYNTIIFGLVKNGQVKEA 664

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
             +  +M  + + P+F T   L+
Sbjct: 665 MCFFHQM-KKLVYPDFVTLCTLL 686



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 268/594 (45%), Gaps = 84/594 (14%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
            EID    LL +M VE   C   V +  S+IN+  +    ++A KMF R++E  LKPTV  
Sbjct: 520  EIDEAIKLLSEM-VENC-CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 577

Query: 68   YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
            YN +L  L    +      ++  M + G  PN  T+N L   LCKN+ V  A K+L +M 
Sbjct: 578  YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 637

Query: 128  NKGCAPDAVSYTTIV----------------------------------SSICKLGQVEE 153
            + GC PD  +Y TI+                                    + K G +E+
Sbjct: 638  DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIED 697

Query: 154  ARELAMRF--------------------------GSGVSVYNALI-NGLCKE-------- 178
            A ++   F                           + VS    L+ NG+C++        
Sbjct: 698  AYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPI 757

Query: 179  ------HKIEEAFWLLCEMV--DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
                  H       +L E    D G+ P + TY+ +I  L +   +E +  +  Q+   G
Sbjct: 758  IRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTG 817

Query: 231  CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            C P++ ++  LL  Y   G+  E  +++  M      PN + ++ +I GL   G++D+A+
Sbjct: 818  CIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDAL 877

Query: 291  SVSYQ-MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             + Y  M +    P   TY  LIDG +K+G L  A Q++  M   GC PN   Y  ++  
Sbjct: 878  DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILING 937

Query: 350  LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
              +      A +L ++M  E   P+  T++  +  LC  GRVD  +    ++K+    P+
Sbjct: 938  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPD 997

Query: 410  ITTYNELLDGLLRVNRVKEAFELVTEIEKC-GIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            +  YN +++GL + +R++EA  L  E++K  GI  ++ TYN+++  +  AGMV EA ++ 
Sbjct: 998  VVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1057

Query: 469  GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
             ++   G + +  TFN +I  Y   GK  +A  +   +  GG ++P+  +Y  L
Sbjct: 1058 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG-FSPNTGTYEQL 1110



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 240/503 (47%), Gaps = 41/503 (8%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
           T N +L+AL  + +++    +   M  +    D  +Y TI   +   G + +A   A+R 
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQA-PFALRK 180

Query: 161 ---FGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              FG  ++ Y  N LI+ L K     EA  +   M+  G  P++ TYS+++  L    +
Sbjct: 181 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRD 240

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +E+ +G+L +M   G  PN+++FT  ++     G+ +EA ++  RM  EG  P+VV Y+ 
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 300

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI  LC+   +D A  V  +M+     P+  TY  L+D F+   +L   +Q W+ M  +G
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDG 360

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+VV +T +V  LC+   F +A + ++ M  +   PN  T+NT I GL    R+D A+
Sbjct: 361 HVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 420

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++ D M+     P   TY   +D   +      A E   +++  GI  NIV  N  L+ +
Sbjct: 421 EIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 480

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--------- 506
            +AG   EA Q+   +   G   D++T+N+++  Y K G+++ AI+LL  +         
Sbjct: 481 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDV 540

Query: 507 --------------RGGGEW-----------NPDIISYTSLLWGICNSGGMQEAFIYLQK 541
                         R    W            P +++Y +LL G+  +G +QEA    + 
Sbjct: 541 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 600

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           M+ +G  PN  T+N L   L  N
Sbjct: 601 MVQKGCPPNTITFNTLFDCLCKN 623



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 138/285 (48%), Gaps = 11/285 (3%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI---R 57
            +++  G+  +ID +  + ++M       +      VI+   + G  + AL ++Y +   R
Sbjct: 828  LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887

Query: 58   EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
            +F   PT   Y  ++D L    R      ++  M   G  PN   YNIL+    K    D
Sbjct: 888  DFS--PTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEAD 945

Query: 118  GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALI 172
             A  L   M  +G  PD  +Y+ +V  +C +G+V+E     REL        V  YN +I
Sbjct: 946  AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLII 1005

Query: 173  NGLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
            NGL K H++EEA  L  EM   RGI P++ TY+++I +L   G VE +  I  ++   G 
Sbjct: 1006 NGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1065

Query: 232  NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             PN+ +F +L++GY L G+   A  ++  M+  GF PN   Y  L
Sbjct: 1066 EPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 95/188 (50%), Gaps = 1/188 (0%)

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
            T T N  ++ L   G+++    + D M++     +  TY  +   L     +++A   +
Sbjct: 119 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFAL 178

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            ++ + G  LN  +YN ++H + ++    EA ++  +M+++G +    T++ ++    K+
Sbjct: 179 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKR 238

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             + + + LL  +   G   P++ ++T  +  +  +G + EA+  L++M +EG  P+  T
Sbjct: 239 RDIESVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 297

Query: 554 WNVLVRSL 561
           + VL+ +L
Sbjct: 298 YTVLIDAL 305


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 258/539 (47%), Gaps = 10/539 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V   ++ ++   G   +A  M   +R  GL   V+  N +L   L    F     ++  M
Sbjct: 5   VMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGM 64

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G+ P    +  L+   C+  +V+    LL  M   G + D  + T +V S+C+ G+ 
Sbjct: 65  TRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 124

Query: 152 EEARELAMRF---GSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++  E   R    G+  +V  Y A I+GLCK   +++AF +L EMV RG+ PNV T++T+
Sbjct: 125 KDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 184

Query: 207 ISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I  LC +G  E +  +  ++       PN+H++T ++ GY   G+   A  L  RM+ +G
Sbjct: 185 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 244

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PN   Y+TLI G C  GS D A  +  +M++    PN+ TY+A+IDGF K G +  A 
Sbjct: 245 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 304

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++     S G   + + YT ++   C+      A  L ++M    C P+   + + I   
Sbjct: 305 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 364

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   +++ + K  D+      LP   TY  ++ G  +V R   A  +   + + G   + 
Sbjct: 365 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 424

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TY  ++ G+C+   + EA  L   ML +      +T   + + YC++ K + A+ +LDR
Sbjct: 425 ITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAVSVLDR 484

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +    +    + +   ++  +   G +  A ++L+K+L+E    + AT+   + S + N
Sbjct: 485 L----DKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYEN 539



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/390 (23%), Positives = 170/390 (43%), Gaps = 38/390 (9%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFGLKPTVKIYNHILDA 74
           ++L++M   G+  +     ++I+   ++G  E+A ++F + I+    KP V  Y  ++  
Sbjct: 164 HVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGG 223

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
              E + +    +   M   G++PN  TY  L+   CK    D A++L+ +M  +G  P+
Sbjct: 224 YCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPN 283

Query: 135 AVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLC 189
             +Y  ++   CK G+++EA + L M    G+      Y  LI   CK+  I  A  L  
Sbjct: 284 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 343

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV+ G  P++  Y+++IS+ C    +E S     +  + G  P   ++TS++ GY   G
Sbjct: 344 RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 403

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP------ 303
           R+  A  ++ RM++ G   + + Y  LI GLC    ++EA ++   M +    P      
Sbjct: 404 RSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRV 463

Query: 304 --------------------------NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
                                      V T   ++   +  G++  AS    +++    +
Sbjct: 464 TLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYA 523

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            +   YT  +    +NN +  A  + EK +
Sbjct: 524 VDHATYTGFINSCYENNRYALASEMSEKFS 553


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 270/528 (51%), Gaps = 17/528 (3%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           +Y R  +   AL +  +++   L+ ++  YN +L  L       ++  +Y+ +K  G+  
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEIKASGVPQ 233

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-- 156
           N +T  IL+  LC+ +R+  A   L E G +   P  VS+  ++S  CK+G V+ A+   
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 157 -LAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            + +++G    V  YN L++GLC    +EEA     +M + G++P+++TY+ + +    +
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +  ++ +M + G NP++ ++T L+ G+   G   E+  L  +M+ +G   ++V Y
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + L+  LC +G +DEAV + ++ME     P++ TYS         G +  A +++  M S
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCS 465

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               PN    + ++  L +     +A    + +   +     + +N  I G    G +  
Sbjct: 466 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 525

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++   Q+ +    P I T+N L+ G  +  ++ EA +L+  I+  G+    VTY T+++
Sbjct: 526 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 585

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C  G +   F +L +M  +  K   IT+ +++   CK+G+++ ++QLL  +   G + 
Sbjct: 586 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLF- 644

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PD I+Y +++   C +  +Q+AF    +ML   + P+  T+NVL+  L
Sbjct: 645 PDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 692



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 274/555 (49%), Gaps = 14/555 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  +  +      L++   E    S   F ++++ + ++G  + A   F  + ++G
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  YN +L  L             ++M+  G+EP++ TYNIL         + GA+
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           K++  M   G  PD V+YT ++   C++G +EE+ +L  +  S      +  Y  L++ L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +I+EA  LL EM   G+ P+++TYS         G VE ++ +  +M  +   PN 
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNS 472

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
              ++++ G    G   EA   ++ + +      ++ Y+ +I G    G++ EAV    Q
Sbjct: 473 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 532

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E    P + T+++LI GF K G L  A ++ + +  +G  P  V YT ++   C+   
Sbjct: 533 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 592

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H    ++ +M  +   P  +T+   +KGLC  GR+  +++LL  M      P+  TYN 
Sbjct: 593 MHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNT 652

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++    + + +++AF+L  ++ +  +Q + VTYN +++G+C  G + +A +LL  +  + 
Sbjct: 653 VIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS 712

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            +L  + +  II A+C +G V NA+    ++   G +   I  Y++++  +C    + +A
Sbjct: 713 IRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG-FEVSIRDYSAVINRLCKRNLITDA 771

Query: 536 FIYLQKMLNEGICPN 550
             +   ML  GI P+
Sbjct: 772 KFFFCMMLTHGIPPD 786



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 252/510 (49%), Gaps = 16/510 (3%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
            EFG  P+V  +N ++          +    +  M + G+ P+V++YNILL  LC    +
Sbjct: 264 EEFG--PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSM 321

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNAL 171
           + A +   +M N G  PD V+Y  + +    LG +  A ++  R         +  Y  L
Sbjct: 322 EEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTIL 381

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I G C+   IEE+F L  +M+ +G+  +++TY+ ++SSLC  G ++ ++ +L +M V G 
Sbjct: 382 ICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGL 441

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P++ +++         G   EA +L+  M  +   PN    S +I GL   G++ EA  
Sbjct: 442 KPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQM 493

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
               + ++     +  Y+ +IDG+AK GN+  A + + ++I  G SP +V +  ++   C
Sbjct: 494 YFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFC 553

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +     +A  L++ +      P +VT+ T + G C  G +     +L +M+     P   
Sbjct: 554 KKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQI 613

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY  ++ GL +  R+ E+ +L+  +   G+  + +TYNT++   C+A  + +AFQL  +M
Sbjct: 614 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 673

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           L    +   +T+N++I   C  G + +A +LL  ++         ++YT+++   C  G 
Sbjct: 674 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS-IRLTKVAYTTIIKAHCAKGD 732

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Q A ++  +M+  G   +   ++ ++  L
Sbjct: 733 VQNALVFFHQMVERGFEVSIRDYSAVINRL 762



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/471 (25%), Positives = 218/471 (46%), Gaps = 13/471 (2%)

Query: 38  NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           N +R +GL   A K+  R+   GL P +  Y  ++              +   M   G++
Sbjct: 348 NGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLK 407

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            ++ TY +LL +LCK+ R+D A  LL EM   G  PD ++Y+         G VEEA EL
Sbjct: 408 LSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIEL 459

Query: 158 -----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                + R      V +A+I+GL ++  I EA      +    +   +I Y+ +I     
Sbjct: 460 YEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAK 519

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +GN+  ++    Q+  +G +P I +F SL+ G+   G+  EA  L + +   G +P  V 
Sbjct: 520 LGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 579

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+TL++G C  G M     + ++ME  +  P   TY+ ++ G  K G L  + Q+   M 
Sbjct: 580 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY 639

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           + G  P+ + Y  +++  C+ +   +A  L  +M   +  P+ VT+N  I GLC  G + 
Sbjct: 640 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 699

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A +LL  ++          Y  ++        V+ A     ++ + G +++I  Y+ ++
Sbjct: 700 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 759

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           + +C+  ++ +A      ML  G   D     +++ A+ + G  N+  ++ 
Sbjct: 760 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 810



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 203/457 (44%), Gaps = 66/457 (14%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           V++ L     +   + +A ++L +M    +  ++ TY++++ +L    + +    +  ++
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEI 226

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G   N ++   L+ G     R  +A         E F P+VV+++ L+ G C  GS+
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 287 D-----------------------------------EAVSVSYQMEENSCPPNVTTYSAL 311
           D                                   EA+  +  ME +   P++ TY+ L
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            +GF   G + GA ++  RM+ NG +P++V YT ++   CQ     ++  L EKM  +  
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGL 406

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE---------------- 415
             + VT+   +  LC  GR+D A+ LL +M+     P++ TY+                 
Sbjct: 407 KLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSK 466

Query: 416 -----------LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
                      ++ GL     + EA      + K  +   I+ YN ++ G  + G + EA
Sbjct: 467 RIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEA 526

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +   +++ +G     +TFN +IY +CK+GK+  A++LLD I+  G   P  ++YT+L+ 
Sbjct: 527 VRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG-LVPTSVTYTTLMN 585

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G C  G M   F  L +M  + I P   T+ V+V+ L
Sbjct: 586 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGL 622



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/343 (23%), Positives = 164/343 (47%), Gaps = 5/343 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L EK  I   Q     +    V+    ++  +I+ Y ++G   +A++ + +I E G
Sbjct: 478 IISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKG 537

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PT+  +N ++     + + +    +   +K  G+ P   TY  L+   C+   +   +
Sbjct: 538 ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMF 597

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGL 175
            +L EM  K   P  ++YT +V  +CK G++ E+ +L    +  G+      YN +I   
Sbjct: 598 DMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSF 657

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK H +++AF L  +M+   + P+ +TY+ +I+ LC  GN++ +  +L  +  +      
Sbjct: 658 CKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTK 717

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+++K +   G    A   +++M+  GF  ++  YS +I+ LC    + +A      
Sbjct: 718 VAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCM 777

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           M  +  PP+      +++ F ++G+     +I+  MI  G  P
Sbjct: 778 MLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 152/319 (47%), Gaps = 12/319 (3%)

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            Y      H+A  +  +M       ++  Y++L++ L     M +   V  +++ +  P 
Sbjct: 177 AYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQ 233

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  T   LIDG  +   L  A             P+VV++  ++   C+      A S  
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             M      P+  ++N  + GLC  G ++ A++  + M+ +   P+I TYN L +G   +
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +  A+++V  +   G+  ++VTY  ++ G C+ G + E+F+L  KML +G KL  +T+
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            +++ + CK G+++ A+ LL  +   G   PD+++Y+         G ++EA    ++M 
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIG-LKPDLLTYSR--------GAVEEAIELYEEMC 464

Query: 544 NEGICPNFATWNVLVRSLF 562
           ++ I PN    + ++  LF
Sbjct: 465 SKRIYPNSFVCSAIISGLF 483



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 33/255 (12%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT------------------ 380
           N V +  +     +  M H A  ++ KM   N   +  T+N+                  
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEI 226

Query: 381 --------------FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                          I GLC   R+  A+  L +    E  P++ ++N L+ G  ++  V
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
             A      + K G+  ++ +YN +LHG+C AG + EA +    M   G + D +T+NI+
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNIL 346

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
              +   G ++ A +++ R+   G  NPD+++YT L+ G C  G ++E+F   +KML++G
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNG-LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 547 ICPNFATWNVLVRSL 561
           +  +  T+ VL+ SL
Sbjct: 406 LKLSIVTYTVLLSSL 420



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 4/191 (2%)

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           +F +   N V ++           V  A+ +L +MK      +I TYN LL  L   + +
Sbjct: 160 SFRDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIM 219

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
              +++  EI+  G+  N  T   ++ G+CR   + +A   L +   E      ++FN +
Sbjct: 220 ---WDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNAL 276

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +  +CK G V+ A      +   G   PD+ SY  LL G+C +G M+EA  +   M N G
Sbjct: 277 MSGFCKMGSVDVAKSFFCMMIKYGLL-PDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335

Query: 547 ICPNFATWNVL 557
           + P+  T+N+L
Sbjct: 336 VEPDIVTYNIL 346


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 269/529 (50%), Gaps = 13/529 (2%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRF----SMINPIYSNMKRDGMEPNVFT 102
           ++AL +F  +      P+VK +  +L A++    +    S++  ++S++   G+E +  T
Sbjct: 58  DEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSL---GIEADTIT 114

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---- 158
            NI++  LC+   V   + +L  M   G  P  ++ TT+++ +C  G V +A  LA    
Sbjct: 115 LNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHME 174

Query: 159 -MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            M +   V  Y  LINGLCK      A   L +M +R   PNV+ YSTI+  LC  G V 
Sbjct: 175 KMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVS 234

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  +M  +G  PN+ ++  L++G    GR  EA  L + M++ G  P++   + L+
Sbjct: 235 EALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILV 294

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C  G + +A SV   M      P+V TY++LI  +     +  A ++++ M+S G  
Sbjct: 295 DAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRL 354

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P++V +T ++   C++   ++A  L+E+M+     P+  T+ T I G C  GR   A +L
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKEL 414

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
              M +Y  +PN+ T   +LDGL + N + EA  L   +EK  + LNIV Y+ +L G+C 
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCS 474

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           AG +  A++L   +  +G +++   + I+I   CKQG ++ A  LL  +   G   P+  
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCL-PNNC 533

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           +Y   + G+     +  +  YL  M ++G   + AT   ++  L +N G
Sbjct: 534 TYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEG 582



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 241/482 (50%), Gaps = 8/482 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I  V+++   + +E  + +  +   VIN   R+ L      +   + + GL+PTV     
Sbjct: 96  ISLVKHMFSSLGIEADTITLNI---VINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTT 152

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++ L  +   +    +  +M++     +V+TY +L+  LCK      A   L +M  + 
Sbjct: 153 LINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERN 212

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAF 185
             P+ V Y+TI+  +CK G V EA  L     G GV      Y  LI GLC   + +EA 
Sbjct: 213 WKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAG 272

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM+  G+ P++   + ++ + C  G V  +  ++G M + G  P++ ++ SL+  Y
Sbjct: 273 SLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIY 332

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            L  + +EA  +++ M+  G LP++V +++LIHG C + ++++A+ +  +M +    P+V
Sbjct: 333 CLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDV 392

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LI GF +AG  L A +++  M   G  PN+     ++  LC+ N+  +A SL + 
Sbjct: 393 ATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKA 452

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M   N   N V ++  + G+C  G+++ A +L   +       N+  Y  ++ GL +   
Sbjct: 453 MEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGS 512

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + +A +L+  +E+ G   N  TYN  + G+     +  + + L  M  +G  +DA T   
Sbjct: 513 LDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEF 572

Query: 486 II 487
           II
Sbjct: 573 II 574



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 156/342 (45%), Gaps = 5/342 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +GV  +   +  +I      G  ++A  +   + + G++P +++ N ++DA  
Sbjct: 239 LCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFC 298

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      +   M   G  P+VFTYN L+   C  N+++ A ++   M ++G  PD V
Sbjct: 299 KEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIV 358

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            +T+++   CK   + +A  L      M F   V+ +  LI G C+  +   A  L   M
Sbjct: 359 VFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNM 418

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  PN+ T + I+  LC    +  ++ +   M     + NI  ++ LL G    G+ 
Sbjct: 419 HKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKL 478

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           + A +L++ +  +G   NV  Y+ +I GLC  GS+D+A  +   MEEN C PN  TY+  
Sbjct: 479 NAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVF 538

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           + G      +  + +    M   G S +      ++  L  N
Sbjct: 539 VQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTN 580



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 5/205 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+   +LL++M   G       + ++I  + + G    A ++F  + ++G  P ++    
Sbjct: 373 INKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAV 432

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ILD L  EN  S    +   M++  ++ N+  Y+ILL  +C   +++ A++L   +  KG
Sbjct: 433 ILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAF 185
              +   YT ++  +CK G +++A +L +       +     YN  + GL  + +I  + 
Sbjct: 493 LQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSI 552

Query: 186 WLLCEMVDRGIDPNVITYSTIISSL 210
             L  M D+G   +  T   II+ L
Sbjct: 553 KYLTIMRDKGFSVDAATTEFIINYL 577



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 51/117 (43%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G    A ++F  +   GL+  V IY  ++  L  +        +  NM+ +G  PN  TY
Sbjct: 476 GKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTY 535

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           N+ ++ L     +  + K L  M +KG + DA +   I++ +       + RE   R
Sbjct: 536 NVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTNEGDTKIREFLFR 592


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 248/492 (50%), Gaps = 6/492 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V  L +QM+  G+S +   +   IN + R      AL +  ++ + G
Sbjct: 81  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P++   N +L+     NR S    +   M   G +P+  T+  L+  L ++N+   A 
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            L+  M  KGC PD V+Y  +++ +CK G+ + A  L  +   G     V +YN +I+GL
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +++AF L  +M  +GI P+V TY+ +IS LC+ G    +  +L  M  +  NP++
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             F +L+  ++  G+  EA  L++ M++     P+VVAY+TLI G C    ++E + V  
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +     N  TY+ LI GF +A +   A  ++ +M+S+G  P+++ Y  ++  LC N 
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A  + E M   +   + VT+ T I+ LC  G+V+    L   +      PN+ TY 
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++ G  R    +EA  L  E+++ G   N  TYNT++    R G    + +L+ +M   
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560

Query: 475 GTKLDAITFNII 486
           G   DA TF ++
Sbjct: 561 GFAGDASTFGLV 572



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 259/513 (50%), Gaps = 12/513 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  ++ +L A+   N+F ++  +   M+  G+  N++TY+I +   C+ +++  A  +
Sbjct: 73  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           L +M   G  P  V+  ++++  C   ++ EA  L      M +      +  L++GL +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
            +K  EA  L+  MV +G  P+++TY  +I+ LC  G  + +L +L +M       ++  
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +++ G        +A DL+N+M  +G  P+V  Y+ LI  LC+ G   +A  +   M 
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYTCMVKVLCQNNMF 356
           E +  P++  ++ALID F K G L+ A ++++ M+ S  C P+VVAY  ++K  C+    
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +   +  +M+      NTVT+ T I G       D A  +  QM      P+I TYN L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           LDGL     V+ A  +   ++K  ++L+IVTY T++  +C+AG V + + L   + ++G 
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           K + +T+  ++  +C++G    A  L   ++  G   P+  +Y +L+      G    + 
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRARLRDGDEAASA 551

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
             +++M + G   + +T+      L +N+ H G
Sbjct: 552 ELIKEMRSCGFAGDASTF-----GLVTNMLHDG 579



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/511 (25%), Positives = 254/511 (49%), Gaps = 8/511 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++++  ++   +  + +  +++  G+   +  Y+  ++     ++ S+   I   M 
Sbjct: 78  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G  P++ T N LL   C  NR+  A  L+ +M   G  PD V++TT+V  + +  +  
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EA  L  R         +  Y A+INGLCK  + + A  LL +M    I+ +V+ Y+TII
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC   +++ +  +  +M  +G  P++ ++  L+      GR  +AS L + M+ +   
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           P++V ++ LI      G + EA  +  +M +   C P+V  Y+ LI GF K   +    +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M   G   N V YT ++    Q      A  + ++M  +   P+ +T+N  + GLC
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLC 437

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G V+ A+ + + M++ +   +I TY  +++ L +  +V++ ++L   +   G++ N+V
Sbjct: 438 NNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVV 497

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY T++ G CR G+  EA  L  +M  +G   ++ T+N +I A  + G    + +L+  +
Sbjct: 498 TYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           R  G +  D  ++  L+  + + G + ++F+
Sbjct: 558 RSCG-FAGDASTF-GLVTNMLHDGRLDKSFL 586



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 179/347 (51%)

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ ++G+ G M      P+I  F+ LL       +      L  +M   G   N+  YS 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            I+  C    +  A+++  +M +    P++ T ++L++GF     +  A  + ++M+  G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+ V +T +V  L Q+N   +A +L+E+M  + C P+ VT+   I GLC  G  D A+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LL++M++ +   ++  YN ++DGL +   + +AF+L  ++E  GI+ ++ TYN ++  +
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C  G   +A +LL  ML +    D + FN +I A+ K+GK+  A +L D +       PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +++Y +L+ G C    ++E     ++M   G+  N  T+  L+   F
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFF 402



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 200/389 (51%), Gaps = 2/389 (0%)

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           ++ K+++A  L  +MV     P+++ +S ++S++  +   +  + +  QM   G + N++
Sbjct: 52  QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +++  +  +    +   A  +  +M++ G+ P++V  ++L++G C    + EAV++  QM
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            E    P+  T++ L+ G  +      A  +  RM+  GC P++V Y  ++  LC+    
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A +L+ KM       + V +NT I GLC    +D A  L ++M+     P++ TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +  L    R  +A  L++++ +  I  ++V +N ++    + G +VEA +L  +M+    
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 477 KL-DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D + +N +I  +CK  +V   +++   +   G    + ++YT+L+ G   +     A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNA 410

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +  ++M+++G+ P+  T+N+L+  L +N
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNN 439



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 185/356 (51%), Gaps = 6/356 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ E D    LL +M+   +     ++ ++I+   +    + A  +F ++   G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  YN ++  L    R+S  + + S+M    + P++  +N L+ A  K  ++  A 
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340

Query: 121 KLLVEM-GNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALING 174
           KL  EM  +K C PD V+Y T++   CK  +VEE     RE++ R   G +V Y  LI+G
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             +    + A  +  +MV  G+ P+++TY+ ++  LC+ GNVET+L +   M  R    +
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I ++T++++     G+  +  DL+  +  +G  PNVV Y+T++ G C  G  +EA ++  
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           +M+E+   PN  TY+ LI    + G+   ++++   M S G + +   +  +  +L
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 260/529 (49%), Gaps = 6/529 (1%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           R V   + AL  ++++      P VK +N +   +     ++    +  +M   G++PNV
Sbjct: 2   RNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNV 61

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-- 158
            T+NI++  LC+ N     + +L  M   G  P  V++TTIV+ +C  G V +A      
Sbjct: 62  STHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDH 121

Query: 159 ---MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              M + S      A+INGLCK      A   L +M ++  + +V  YS ++  LC  G 
Sbjct: 122 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGM 181

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V  +L +  QM  +G  PN+ ++  L+ G     R  EA+ L   M+R+G +P+V  ++ 
Sbjct: 182 VFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNV 241

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +       G +  A S+   M       NV TY+++I        +  A ++++ MI  G
Sbjct: 242 IAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKG 301

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C PN+V Y  ++   C+    ++A   + +M      P+ VT++T I G C  G+   A 
Sbjct: 302 CLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAK 361

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +L   M ++  LP++ T   +LDGL + +   EA  L  E+EK    L+I+ Y+ IL+G+
Sbjct: 362 ELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGM 421

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C +G + +A +L   +  +G K+D +T+NI+I   CK+G +++A  LL ++   G   PD
Sbjct: 422 CSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG-CPPD 480

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             +Y   + G+     + ++  YL  M  +G   N  T  +L+    +N
Sbjct: 481 ECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN 529



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 245/492 (49%), Gaps = 6/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++ M   GV  +      VIN   R+        +   + + G++P++  +  I++ L 
Sbjct: 48  LIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLC 107

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   +       ++K  G E + +T   ++  LCK      A   L +M  + C  D  
Sbjct: 108 VEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVT 167

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ +V  +CK G V EA +L  +  G G+      YN LI+GLC   + +EA  LL  M
Sbjct: 168 AYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANM 227

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +GI P+V T++ I       G +  +  I   M   G   N+ ++ S++  + +  + 
Sbjct: 228 MRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQM 287

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A ++++ MIR+G LPN+V Y++LIHG C   +M++A+    +M  N   P+V T+S L
Sbjct: 288 KDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTL 347

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF KAG  + A +++  M  +G  P++     ++  L + +   +A SL  ++   N 
Sbjct: 348 IGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNS 407

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + + ++  + G+C  G+++ A++L   +       ++ TYN +++GL +   + +A +
Sbjct: 408 DLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAED 467

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ ++E+ G   +  TYN  + G+ R   + ++ + L  M  +G + +A T  ++I  Y 
Sbjct: 468 LLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI-NYF 526

Query: 492 KQGKVNNAIQLL 503
              K N A Q+ 
Sbjct: 527 SANKENRAFQVF 538



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 98/207 (47%), Gaps = 5/207 (2%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E   ++   Y L +M   G+      + ++I  + + G    A ++F+ + + G  P ++
Sbjct: 318 ETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQ 377

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
               ILD L   +  S    ++  +++   + ++  Y+I+L  +C + +++ A +L   +
Sbjct: 378 TCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYL 437

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKI 181
            +KG   D V+Y  +++ +CK G +++A +L M+            YN  + GL + ++I
Sbjct: 438 SSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEI 497

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIIS 208
            ++   L  M  +G   N  T   +I+
Sbjct: 498 SKSTKYLMFMKGKGFRANATTTKLLIN 524


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 237/446 (53%), Gaps = 14/446 (3%)

Query: 134 DAVSYTTIVSSICKLGQ---------VEEARELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           DAVSY  +++++C+ G           + +RE           Y  ++ GLC   + +EA
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL  M   G+  +V+TY T+I  LCD   ++ +L +LG+M   G +PN+  ++ LL+G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   GR  + S ++  M R G  P+V+ ++  I  LC  G + +AV V   M +    PN
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY+ LI+   K G++  A  + N M   G +P+VV Y  ++  L        A  L+E
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 365 KMAFENC--PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +M   +    P+ VTFN+ I GLC  GR+  A+ + + M +  C+ N+ TYN L+ G LR
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR 374

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           V++V  A  L++E+   G++ +  TY+ +++G  +   V  A   L  M   G + +   
Sbjct: 375 VHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFH 434

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +  ++ A C+ G +  A+ L + +        D ++Y+++++G C SG ++ A   LQ M
Sbjct: 435 YIPLLAALCQLGMMEQAMVLFNEM--DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDM 492

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
           L+EG+ P+  T+++L+ ++F+ LG L
Sbjct: 493 LDEGLAPDAVTYSILI-NMFAKLGDL 517



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 238/500 (47%), Gaps = 48/500 (9%)

Query: 99  NVFTYNILLKALCKNN-RVDGAYKLLVEM---GNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           +  +YNI+L ALC+    +  A  LL +M    +    P+AVSYT ++  +C   + +EA
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L     A    + V  Y  LI GLC   +++ A  LL EM   G+ PNVI YS ++  
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  G  +    +  +M   G  P++  FT  +      GR  +A  + + M++ G  PN
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+ LI+ LC  GS+ EA+++  +M++    P+V TY+ LI G +    + GA  +  
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 330 RMISNGC--SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            MI       P+VV +  ++  LC+     QA S+ E MA   C  N VT+N  I G   
Sbjct: 315 EMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLR 374

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ----- 442
             +V+ AM L+ ++      P+  TY+ L++G  ++  V  A   +  + + GI+     
Sbjct: 375 VHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFH 434

Query: 443 -----------------------------LNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
                                        L+ V Y+T+++G C++G +  A QLL  ML 
Sbjct: 435 YIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLD 494

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           EG   DA+T++I+I  + K G +  A ++L ++   G + PD+  + SL+ G    G + 
Sbjct: 495 EGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG-FVPDVAVFDSLIKGYSAEGQIN 553

Query: 534 EAFIYLQKML--NEGICPNF 551
           +    + +M   N  I P F
Sbjct: 554 KILDLIHEMRAKNVAIDPKF 573



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 233/478 (48%), Gaps = 11/478 (2%)

Query: 41  RRVGLAEQALKMFY---RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           RR G   QAL +     R      +P    Y  ++  L A  R      +  +M+  G+ 
Sbjct: 88  RRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVR 147

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ---VEEA 154
            +V TY  L++ LC    +DGA +LL EM   G  P+ + Y+ ++   C+ G+   V + 
Sbjct: 148 ADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKV 207

Query: 155 RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            E   R G    V ++   I+ LCK+ +I +A  +   MV RG++PNV+TY+ +I+ LC 
Sbjct: 208 FEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCK 267

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL--PNV 270
            G+V  +L +  +M  +G  P++ ++ +L+ G         A  L   MI+   L  P+V
Sbjct: 268 EGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDV 327

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V ++++IHGLC  G M +A+SV   M E  C  N+ TY+ LI GF +   +  A  + + 
Sbjct: 328 VTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSE 387

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +IS+G  P+   Y+ ++    +     +A   +  M           +   +  LC  G 
Sbjct: 388 LISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGM 447

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ AM L ++M    C  +   Y+ ++ G  +   +K A +L+ ++   G+  + VTY+ 
Sbjct: 448 MEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSI 506

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           +++   + G + EA ++L +M   G   D   F+ +I  Y  +G++N  + L+  +R 
Sbjct: 507 LINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRA 564



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 218/441 (49%), Gaps = 10/441 (2%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+ +   ++  G++  V  Y  ++  L           +   M   G+ PNV  Y+ L
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG- 162
           L+  C++ R     K+  EM   G  PD + +T  +  +CK G++ +A   +++ ++ G 
Sbjct: 192 LRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGL 251

Query: 163 -SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YN LIN LCKE  + EA  L  EM D+G+ P+V+TY+T+I+ L  V  ++ ++G
Sbjct: 252 EPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMG 311

Query: 222 ILGQMFVRG---CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L +M ++G     P++ +F S++ G    GR  +A  +   M   G + N+V Y+ LI 
Sbjct: 312 LLEEM-IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIG 370

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G      ++ A+++  ++  +   P+  TYS LI+GF+K   +  A      M   G   
Sbjct: 371 GFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRA 430

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            +  Y  ++  LCQ  M  QA  L  +M   NC  + V ++T + G C  G +  A +LL
Sbjct: 431 ELFHYIPLLAALCQLGMMEQAMVLFNEMDM-NCGLDAVAYSTMMYGACKSGDIKAAKQLL 489

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M      P+  TY+ L++   ++  ++EA  ++ ++   G   ++  +++++ G    
Sbjct: 490 QDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAE 549

Query: 459 GMVVEAFQLLGKMLIEGTKLD 479
           G + +   L+ +M  +   +D
Sbjct: 550 GQINKILDLIHEMRAKNVAID 570



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 203/409 (49%), Gaps = 8/409 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  E+DG   LL +M   GV  +  V+  ++  Y R G  +   K+F  +   G
Sbjct: 156 LIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLG 215

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V ++   +D L  + R      +   M + G+EPNV TYN+L+  LCK   V  A 
Sbjct: 216 VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREAL 275

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSIC-------KLGQVEEARELAMRFGSGVSVYNALIN 173
            L  EM +KG APD V+Y T+++ +         +G +EE  +        V  +N++I+
Sbjct: 276 ALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIH 335

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK  ++ +A  +   M +RG   N++TY+ +I     V  V  ++ ++ ++   G  P
Sbjct: 336 GLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEP 395

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +++ L+ G+        A      M + G    +  Y  L+  LC  G M++A+ + 
Sbjct: 396 DSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLF 455

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+ N C  +   YS ++ G  K+G++  A Q+   M+  G +P+ V Y+ ++ +  + 
Sbjct: 456 NEMDMN-CGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKL 514

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
               +A  ++++MA     P+   F++ IKG    G+++  + L+ +M+
Sbjct: 515 GDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMR 563



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 211/442 (47%), Gaps = 12/442 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D    LL+ M+  GV      + ++I         + AL++   +   G+ P V +Y+ +
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L       R+  ++ ++  M R G+EP+V  +   +  LCK  R+  A K+   M  +G 
Sbjct: 192 LRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGL 251

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMR-------FGSGVSVYNALINGLCKEHKIEEA 184
            P+ V+Y  +++ +CK G V EA  LA+R           V  YN LI GL    +++ A
Sbjct: 252 EPNVVTYNVLINCLCKEGSVREA--LALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGA 309

Query: 185 FWLLCEMV--DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
             LL EM+  D  ++P+V+T++++I  LC +G +  ++ +   M  RGC  N+ ++  L+
Sbjct: 310 MGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLI 369

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+L   + + A +L + +I  G  P+   YS LI+G      +D A      M +    
Sbjct: 370 GGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIR 429

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
             +  Y  L+    + G +  A  ++N M  N C  + VAY+ M+   C++     A  L
Sbjct: 430 AELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACKSGDIKAAKQL 488

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           ++ M  E   P+ VT++  I      G ++ A ++L QM     +P++  ++ L+ G   
Sbjct: 489 LQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSA 548

Query: 423 VNRVKEAFELVTEIEKCGIQLN 444
             ++ +  +L+ E+    + ++
Sbjct: 549 EGQINKILDLIHEMRAKNVAID 570



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 140/277 (50%), Gaps = 14/277 (5%)

Query: 314 GFAKAGNLLGASQIWNRMISNGCS-----PNV---VAYTCMVKVLCQNN-MFHQAHSLIE 364
           G A A  LL   ++    ++  CS     P+V   V+Y  ++  LC+      QA SL+ 
Sbjct: 43  GRADAAALLN-RRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLA 101

Query: 365 KMAFENCP---PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            M+ E  P   PN V++   ++GLC   R D A+ LL  M+      ++ TY  L+ GL 
Sbjct: 102 DMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLC 161

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               +  A EL+ E+   G+  N++ Y+ +L G CR+G   +  ++  +M   G + D I
Sbjct: 162 DAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVI 221

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            F   I   CK+G++  A+++ D +   G   P++++Y  L+  +C  G ++EA     +
Sbjct: 222 MFTGFIDDLCKKGRIGKAVKVKDIMVQRG-LEPNVVTYNVLINCLCKEGSVREALALRNE 280

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           M ++G+ P+  T+N L+  L   L   G + +L++++
Sbjct: 281 MDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMI 317


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 146/504 (28%), Positives = 252/504 (50%), Gaps = 18/504 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +LQ++K   +  S   F  +I +Y   G+ E+A++ F  +R+F  KP +  +N IL  L+
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLV 174

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +  F +   +Y+ M +  + P+V TY IL+  LCK  +   A  L  EM ++G  P+ +
Sbjct: 175 RKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQI 234

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y+ ++S +C+  ++ +A+ L  +   SG +     YN L+NG CK   +++AF LL  +
Sbjct: 235 IYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLL 294

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G    VI Y  +I+ L      E +     +M      P++  +T +++G    GR 
Sbjct: 295 TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRV 354

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L   M   G  P+ + Y+ LI G C  G +DEA S+  ++ ++ C PN  TYS L
Sbjct: 355 TEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSIL 414

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G  K G +  A  I+  M   GC P+VV +  ++  LC+ N   +A  L  +M     
Sbjct: 415 ICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRK 474

Query: 372 PP-------------NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           P              +  +    ++ LC  G +  A KLL Q+     LP+I TYN L++
Sbjct: 475 PSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILIN 534

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           G  +   +  AF+L  E++  G   + VTY T++ G+ RAG   +A ++  +M+ +G   
Sbjct: 535 GFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594

Query: 479 DAITFNIIIYAYCKQGKVNNAIQL 502
           ++ T+  I+   C++  ++ A+ +
Sbjct: 595 ESSTYKTIMTWSCRENNISLALSV 618



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 259/514 (50%), Gaps = 27/514 (5%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           + + I+  L+ EN F +   +   +K   ++ +   +++L++A  +    + A +    M
Sbjct: 95  VQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLM 154

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---------RFGSGVSVYNALINGLCK 177
            +  C PD  ++  I+  + +    +EA  LA+              V  Y  LI+GLCK
Sbjct: 155 RDFDCKPDLFAFNLILHFLVR----KEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCK 210

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             K ++A  L  EM DRGI PN I YS ++S LC    +  +  +  +M   GCN ++ +
Sbjct: 211 TCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT 270

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +  LL G+   G   +A  L   + ++G +  V+ Y  LI+GL      +EA     +M 
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             +  P+V  Y+ +I G ++ G +  A  +   M   G  P+ + Y  ++K  C      
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A SL  +++  +C PN  T++  I G+C  G ++ A  +  +M++  CLP++ T+N L+
Sbjct: 391 EAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLI 450

Query: 418 DGLLRVNRVKEAFELVTEIE---KCGIQL----------NIVTYNTILHGVCRAGMVVEA 464
           +GL + NR++EA  L  ++E   K  + L          +I +   ++  +C +GM+++A
Sbjct: 451 NGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           ++LL +++  G   D  T+NI+I  +CK G +N A +L   ++  G   PD ++Y +L+ 
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHM-PDSVTYGTLID 569

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G+  +G  ++A    ++M+ +G  P  +T+  ++
Sbjct: 570 GLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIM 603



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 239/477 (50%), Gaps = 19/477 (3%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE---LAMR 160
           ++++  L K N  +  +K+L E+ N      + +++ ++ +  + G  E+A E   L   
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 161 FG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           F     +  +N +++ L ++     A  +  +M+   ++P+V+TY  +I  LC     + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L +  +M  RG  PN   ++ +L G     +  +A  L+++M   G   +++ Y+ L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C +G +D+A ++   + ++     V  Y  LI+G  +A     A   + +M+     P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V+ YT M++ L Q     +A +L+ +M      P+T+ +N  IKG C  G +D A  L 
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLR 396

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++ +++C PN  TY+ L+ G+ +   + +A  +  E+EK G   ++VT+N++++G+C+A
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKA 456

Query: 459 GMVVEAFQLLGKM-----------LIEGTK--LDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             + EA  L  +M           L +GT    D  +  +++   C+ G +  A +LL +
Sbjct: 457 NRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +   G   PDI +Y  L+ G C  G +  AF   ++M  +G  P+  T+  L+  L+
Sbjct: 517 LVDSGVL-PDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLY 572



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 171/363 (47%), Gaps = 18/363 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   Q L  +M+  G +     +  ++N + + G  + A  +   + + G    V  Y 
Sbjct: 248 KIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYG 307

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L    R+   +  Y  M R+ ++P+V  Y I+++ L +  RV  A  LL EM  +
Sbjct: 308 CLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  PD + Y  ++   C +G ++EA  L +             Y+ LI G+CK   I +A
Sbjct: 368 GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKA 427

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM--------FVR---GCNP 233
             +  EM   G  P+V+T++++I+ LC    +E +  +  QM        F+R   G + 
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487

Query: 234 --NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             +I S   +++     G   +A  L  +++  G LP++  Y+ LI+G C  G+++ A  
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFK 547

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M+     P+  TY  LIDG  +AG    A +I+ +M+  GC P    Y  ++   C
Sbjct: 548 LFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSC 607

Query: 352 QNN 354
           + N
Sbjct: 608 REN 610



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 111/275 (40%), Gaps = 40/275 (14%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G+  +A K+  ++ + G+ P ++ YN +++        +    ++  M+  G  P+  TY
Sbjct: 505 GMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTY 564

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV------------ 151
             L+  L +  R + A ++  +M  KGC P++ +Y TI++  C+   +            
Sbjct: 565 GTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLR 624

Query: 152 -------EEARELAMRFGS--------------------GVSVYNALINGLCKEHKIEEA 184
                  E+ R +A  F +                     ++ Y   + GL +  +  EA
Sbjct: 625 DFRGWEDEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEA 684

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F +   + D  ++ +  +   +I  LC V N++ ++ +      RG          LL  
Sbjct: 685 FAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCN 744

Query: 245 YLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIH 278
            L   R  +A  L NRM   G+ L   + Y T +H
Sbjct: 745 LLHLDRKDDALFLANRMEASGYDLGAHLHYRTKLH 779



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 78/151 (51%), Gaps = 1/151 (0%)

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           T  + ++  L++ N  +  ++++ E++   I+++   ++ ++     AGM  +A +  G 
Sbjct: 94  TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGL 153

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M     K D   FN+I++   ++     A+ + +++      NPD+++Y  L+ G+C + 
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN-LNPDVVTYGILIHGLCKTC 212

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             Q+A +   +M + GI PN   +++++  L
Sbjct: 213 KTQDALVLFDEMTDRGILPNQIIYSIVLSGL 243


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 232/449 (51%), Gaps = 27/449 (6%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +  + F R  ++G K ++   N +L  L+ E+    +  +Y  M +  +E NV ++NI++
Sbjct: 103 RGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVV 162

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV 167
             LCK  +++ A  ++ +M   G +P+ ++Y T++   CK+G++                
Sbjct: 163 NGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRI---------------- 206

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
                       K+ +A  +L EMV +GI PN +TY+ +I   C   NV  ++ + G+M 
Sbjct: 207 -----------GKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ 255

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +G  PN+ ++  L+ G    G+  EA  L ++M+     PNVV ++ LI+G C N +++
Sbjct: 256 RQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA+++   ME+    PN  TY+ LID + K G +  A  ++N MI  G  P V  Y C++
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+      A SL+ +M  +    + VT+N  I  LC  G    A+KLLD+M +    
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+  TYN L+DG  R   ++ A  + T +E+ G Q N+VT+N ++ G C  G + +A  L
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGL 495

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           L +ML  G   +  T+ II     ++G V
Sbjct: 496 LNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 224/410 (54%), Gaps = 6/410 (1%)

Query: 153 EARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           EA + A  +G  +S+   N L++GL KE +  +  ++  EM+ R I+ NVI+++ +++ L
Sbjct: 106 EAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGL 165

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT---HEASDLWNRMIREGFL 267
           C VG +  +  ++  M V G +PN+ ++ +L+ GY   GR    ++A  +   M+ +G  
Sbjct: 166 CKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGIC 225

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN V Y+ LI G C + ++  A+ V  +M+     PNV TY+ LI+G    G +  A  +
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            ++M+S+   PNVV +  ++   C+N   ++A +L   M  +   PN +T+ T I   C 
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            GR++ A  L + M      P ++TYN L+ GL R   VK A  L+ E+    +  ++VT
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN ++  +C+ G   +A +LL +M  +G     +T+N ++  YC++G +  A+ +  R+ 
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRME 465

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
             G+   +++++  L+ G C  G +++A   L +ML  G+ PN  T+ ++
Sbjct: 466 RKGK-QANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 189/386 (48%), Gaps = 8/386 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ E   ++++ ++M    +  +   F  V+N   +VG   +A  +   ++ +G
Sbjct: 126 LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185

Query: 61  LKPTVKIYNHILDALLAENRFSMI---NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           + P V  YN ++D      R   +   + I   M   G+ PN  TYNIL+   CK+  V 
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVS 245

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALI 172
           GA ++  EM  +G  P+ V+Y  +++ +C  G+V+EA  L  +  S      V  +N LI
Sbjct: 246 GAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLI 305

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NG CK   + EA  L  +M  +G+DPN +TY+T+I + C  G +E +  +   M  RG  
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P + ++  L+ G    G    A  L N M+ +    +VV Y+ LI  LC  G   +AV +
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M E    P+  TY+ L+DG+ + GNL  A  +  RM   G   NVV +  ++K  C 
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTF 378
                 A+ L+ +M      PN  T+
Sbjct: 486 KGRLEDANGLLNEMLERGLVPNRTTY 511



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 175/321 (54%), Gaps = 5/321 (1%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G   ++     +L++M  +G+  +E  +  +I+ + +      A+++F  ++  GL+P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  YN +++ L ++ +      +   M    +EPNV T+N+L+   CKN  V+ A  L 
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSG----VSVYNALINGLCKE 178
            +M  +G  P+A++YTT++ + CK G++E+A  L  M    G    VS YN LI GLC++
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             ++ A  L+ EMV + +  +V+TY+ +I SLC  G    ++ +L +MF +G NP+  ++
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ GY   G    A  +  RM R+G   NVV ++ LI G C  G +++A  +  +M E
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLE 501

Query: 299 NSCPPNVTTYSALIDGFAKAG 319
               PN TTY  + +   + G
Sbjct: 502 RGLVPNRTTYEIIKEEMMEKG 522



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 166/316 (52%), Gaps = 4/316 (1%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  ++++ + L+ GL       +   V  +M +     NV +++ +++G  K G L  A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNM---FHQAHSLIEKMAFENCPPNTVTFNTF 381
             +   M   G SPNV+ Y  ++   C+       ++A +++++M  +   PN VT+N  
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C    V  AM++  +M++    PN+ TYN L++GL    +V EA  L  ++    +
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+VT+N +++G C+   V EA  L   M  +G   +A+T+  +I AYCK G++ +A  
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFA 354

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L + +   G + P++ +Y  L+ G+C  G ++ A   + +M+++ +  +  T+N+L+ SL
Sbjct: 355 LYNMMIDRGIF-PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSL 413

Query: 562 FSNLGHLGPVYILDDI 577
                    V +LD++
Sbjct: 414 CKKGESRKAVKLLDEM 429



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 182/391 (46%), Gaps = 29/391 (7%)

Query: 187 LLCEMVDRGIDPNVI----TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           LL ++++ G DP +I    T+S     L    ++E +  IL  +        I SF   L
Sbjct: 1   LLQQLLNSGADPELILRYFTWSQKEFKLSH--SLELTFRILNSLAHTKKYSKIRSF---L 55

Query: 243 KGYLLGGRTHEASDLWN--RMIREGFLPNVVAYSTLIHGLCSN-------GSMDEAVSVS 293
             ++   + +  S +++   M  + F  N +    L+     N        +   A    
Sbjct: 56  DKFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYG 115

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           +++   SC P       L+ G  K         ++  MI      NV+++  +V  LC+ 
Sbjct: 116 FKLSLISCNP-------LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKV 168

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK---LLDQMKQYECLPNI 410
              ++A  +IE M      PN +T+NT I G C  GR+    K   +L +M      PN 
Sbjct: 169 GKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNE 228

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN L+DG  +   V  A  +  E+++ G++ N+VTYN +++G+C  G V EA  L  +
Sbjct: 229 VTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQ 288

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M+    + + +T N++I  +CK   VN AI L + +   G  +P+ ++YT+L+   C  G
Sbjct: 289 MVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG-VDPNAMTYTTLIDAYCKDG 347

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            M++AF     M++ GI P  +T+N L+  L
Sbjct: 348 RMEDAFALYNMMIDRGIFPEVSTYNCLIAGL 378



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 76/153 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K ++   + L+ +M  + +S     +  +I+S  + G + +A+K+   + E G
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P+   YN ++D    E        + + M+R G + NV T+N+L+K  C   R++ A 
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDAN 493

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            LL EM  +G  P+  +Y  I   + + G V +
Sbjct: 494 GLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/235 (21%), Positives = 89/235 (37%), Gaps = 65/235 (27%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M+ +GV  +   + ++I++Y + G  E A  ++  + + G+ P V  YN ++  L 
Sbjct: 320 LFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLC 379

Query: 77  AENRF----SMINPIYSN-------------------------------MKRDGMEPNVF 101
            +       S++N + S                                M   G+ P+  
Sbjct: 380 RKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHV 439

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           TYN L+   C+   +  A  +   M  KG   + V++  ++   C  G++E+A       
Sbjct: 440 TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA------- 492

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      NG            LL EM++RG+ PN  TY  I   + + G V
Sbjct: 493 -----------NG------------LLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 270/573 (47%), Gaps = 62/573 (10%)

Query: 49  ALKMFYRIREF--GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           A+  F  +R       PT  +YN ++ A L E+R  ++  +Y ++   G +P+VFT N+L
Sbjct: 92  AIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLL 151

Query: 107 LKALCKNNRVDGAYKLLVEMGNK---------------GCAPDAVSY------------T 139
           L+ALC   R++ A ++   M  +               G + DA+               
Sbjct: 152 LQALCDAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCN 211

Query: 140 TIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD- 193
           T+V+  CK G VEEA  L  R         V  +NA I+ LCK  ++ +A+ +  +M + 
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 194 --RGID-PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
              G+  P+ +T+  ++S  CD G V+ +  ++  M   G    + S+   L G +  GR
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L   M  EG  PN   Y+ ++ GLC  G   +A  V   +      P+V TY++
Sbjct: 332 VGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+  +   GN+  A++I + M   GC+PN   Y  +++ L +     +A  L+E+M  + 
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ-----------------------YECL 407
              +T   N  I GLC   R+D AM ++D M +                         CL
Sbjct: 452 YSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCL 511

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P+  TY+ L+  L +  R  EA + + E+    I  + V Y+T +HG C+ G    A ++
Sbjct: 512 PDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKV 571

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L  M  +G      T+N++I  + ++ K    ++L+  ++  G  +P++++Y SL+   C
Sbjct: 572 LRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKG-ISPNVMTYNSLIKSFC 630

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
             G + +A   L +ML   + PN  ++++L+++
Sbjct: 631 QQGMVNKAMPLLDEMLQNELVPNITSFDLLIKA 663



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 244/480 (50%), Gaps = 23/480 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +V+  + + GL E+A ++  R+R  GL P V  +N  + AL    R      I+ +M+ D
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 95  GM----EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
                  P+  T++++L   C    VD A  L+  M   G      SY   +S + + G+
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 151 VEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           V EA+EL       G+      YN +++GLCKE K  +A  +   +    + P+V+TY++
Sbjct: 332 VGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++ + C  GN+  +  IL +M  +GC PN  ++  LL+     GRT EA  L  RM  +G
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGA 324
           +  +    + +I GLC N  +D A+ +   M EE S                + GN    
Sbjct: 452 YSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGS------------GALGRLGNSF-L 498

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           S + +  IS  C P+ + Y+ ++  LC+   F +A   + +M  ++  P++V ++TFI G
Sbjct: 499 SVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHG 558

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G+   A+K+L  M++  C P+  TYN L+ G    ++ +E  +L++E+++ GI  N
Sbjct: 559 YCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPN 618

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           ++TYN+++   C+ GMV +A  LL +ML      +  +F+++I AYCK     +A  + D
Sbjct: 619 VMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFD 678



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 200/436 (45%), Gaps = 31/436 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            Q LL++M  EG+  +   +  +++   + G A  A ++   IR   + P V  Y  +L 
Sbjct: 335 AQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLH 394

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           A  ++   +  N I   M + G  PN FTYN+LL++L +  R   A +LL  M  KG + 
Sbjct: 395 AYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSL 454

Query: 134 DAVSYTTIVSSICKLGQVEEARE---------------LAMRFGSGVS------------ 166
           D      I+  +C+  +++ A +               L   F S VS            
Sbjct: 455 DTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQ 514

Query: 167 -VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y+ LI+ LCKE + +EA   L EM+ + I P+ + Y T I   C  G    ++ +L  
Sbjct: 515 ITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRD 574

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +GCNP+  ++  L++G+    ++ E   L + M  +G  PNV+ Y++LI   C  G 
Sbjct: 575 MEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGM 634

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +++A+ +  +M +N   PN+T++  LI  + K  +   A  +++  +   C    V Y  
Sbjct: 635 VNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRT-CGQKEVLYCL 693

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
           M   L     + +A +++E MA E      +  +   I GLC  G VD A  LL  +   
Sbjct: 694 MCTELTTYGKWIEAKNILE-MALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAK 752

Query: 405 ECLPNITTYNELLDGL 420
             L +   +  ++D L
Sbjct: 753 RHLFDPAAFMPVIDAL 768



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 122/266 (45%), Gaps = 28/266 (10%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K  I     +L +M  +G + +   +  ++ S  R G   +A ++  R+ E G       
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGME-----------------------PNVFTYN 104
            N I+D L   +R  +   I   M  +G                         P+  TY+
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYS 518

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR 160
           IL+ ALCK  R D A K L+EM  K  +PD+V Y T +   CK G+   A    R++  +
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 161 -FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   YN LI G  ++HK EE   L+ EM ++GI PNV+TY+++I S C  G V  +
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKA 638

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGY 245
           + +L +M      PNI SF  L+K Y
Sbjct: 639 MPLLDEMLQNELVPNITSFDLLIKAY 664



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 142/327 (43%), Gaps = 67/327 (20%)

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           PP    Y+ LI    +   L     ++  ++ +G  P+V     +++ LC       A  
Sbjct: 107 PPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQR 166

Query: 362 LIEKMAFEN--------------------------CPP-NTVTFNTFIKGLCGCGRVDWA 394
           + + M   N                           P  N V  NT + G C  G V+ A
Sbjct: 167 VFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEA 226

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL---------------------- 432
            +L+++M+     PN+ T+N  +  L +  RV +A+ +                      
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286

Query: 433 ----------------VTEIEKCGIQLNIV-TYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
                           + +I +CG  L  V +YN  L G+ R G V EA +LL +M  EG
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + ++ T+NII+   CK+GK  +A ++ + IR  G  +PD+++YTSLL   C+ G +  A
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRVENFIR-SGVMSPDVVTYTSLLHAYCSKGNIAAA 405

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLF 562
              L +M  +G  PN  T+NVL++SL+
Sbjct: 406 NRILDEMAQKGCAPNSFTYNVLLQSLW 432



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 4/233 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++   D  +  L +M V+ +S    ++ + I+ Y + G    A+K+   + + G
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+ + YN ++     +++   I  + S MK  G+ PNV TYN L+K+ C+   V+ A 
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRF-GSGVSVYNALINGLC 176
            LL EM      P+  S+  ++ + CK+     A+   + A+R  G    +Y  +   L 
Sbjct: 640 PLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELT 699

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
              K  EA  +L   ++  +      Y  IIS LC+VG V+ +  +L  +  +
Sbjct: 700 TYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAK 752


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 265/519 (51%), Gaps = 15/519 (2%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNH--ILDALLAENRFSMINPIYSNMKRDGMEP 98
           R+ G A   L +  + R F       +YNH  +L  L           +   M+R+ + P
Sbjct: 121 RKTGFAFGVLALMLK-RGFAFN----VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           +VF+YN +++  C+   ++ A +L  EM   GC+   V++  ++ + CK G+++EA    
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 155 RELA-MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           +E+  M   + + VY +LI G C   +++    L  E+++RG  P  ITY+T+I   C +
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G ++ +  I   M  RG  PN++++T L+ G    G+T EA  L N MI +   PN V Y
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + +I+ LC +G + +AV +   M++    P+  TY+ L+ G    G+L  AS++   M+ 
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 334 NG--CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +     P+V++Y  ++  LC+ N  HQA  + + +  +    + VT N  +      G V
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + AM+L  Q+   + + N  TY  ++DG  +   +  A  L+ ++    +Q ++  YN +
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L  +C+ G + +A++L  +M  +    D ++FNI+I    K G + +A  LL  +   G 
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG- 594

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            +PD+ +Y+ L+      G + EA  +  KM++ G  P+
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 248/497 (49%), Gaps = 9/497 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M + G   NV+ +NILLK LC+N     A  LL EM      PD  SY T++   C+  +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 151 VEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +E+A ELA    GSG S     +  LI+  CK  K++EA   L EM   G++ +++ Y++
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   CD G ++    +  ++  RG +P   ++ +L++G+   G+  EAS+++  MI  G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNV  Y+ LI GLC  G   EA+ +   M E    PN  TY+ +I+   K G +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--CPPNTVTFNTFIK 383
           +I   M      P+ + Y  ++  LC      +A  L+  M  ++    P+ +++N  I 
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC   R+  A+ + D + +     +  T N LL+  L+   V +A EL  +I    I  
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N  TY  ++ G C+ GM+  A  LL KM +   +     +N ++ + CK+G ++ A +L 
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + ++    + PD++S+  ++ G   +G ++ A   L  M   G+ P+  T++ L+   F 
Sbjct: 553 EEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR-FL 610

Query: 564 NLGHLGPVYILDDIMAN 580
            LG+L       D M +
Sbjct: 611 KLGYLDEAISFFDKMVD 627



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 246/497 (49%), Gaps = 7/497 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+   +      + +VI  +      E+AL++   ++  G   ++  +  ++DA  
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +          MK  G+E ++  Y  L++  C    +D    L  E+  +G +P A+
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CKLGQ++EA E+       GV      Y  LI+GLC   K +EA  LL  M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++  +PN +TY+ II+ LC  G V  ++ I+  M  R   P+  ++  LL G    G  
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 252 HEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            EAS L   M+++     P+V++Y+ LIHGLC    + +A+ +   + E     +  T +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L++   KAG++  A ++W ++  +    N   YT M+   C+  M + A  L+ KM   
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+   +N  +  LC  G +D A +L ++M++    P++ ++N ++DG L+   +K A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L+  + + G+  ++ TY+ +++   + G + EA     KM+  G + DA   + ++  
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 490 YCKQGKVNNAIQLLDRI 506
              QG+ +   +L+ ++
Sbjct: 644 CISQGETDKLTELVKKL 660



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 210/410 (51%), Gaps = 7/410 (1%)

Query: 157 LAMRFGSGVSVYNA--LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           L ++ G   +VYN   L+ GLC+  +  +A  LL EM    + P+V +Y+T+I   C+  
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +E +L +  +M   GC+ ++ ++  L+  +   G+  EA      M   G   ++V Y+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +LI G C  G +D   ++  ++ E    P   TY+ LI GF K G L  AS+I+  MI  
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PNV  YT ++  LC      +A  L+  M  ++  PN VT+N  I  LC  G V  A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTIL 452
           +++++ MK+    P+  TYN LL GL     + EA +L+  + K       ++++YN ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-E 511
           HG+C+   + +A  +   ++ +    D +T NI++ +  K G VN A++L  +I      
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            N D  +YT+++ G C +G +  A   L KM    + P+   +N L+ SL
Sbjct: 492 RNSD--TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 200/393 (50%), Gaps = 1/393 (0%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+  L +    E AF    +M++     N ++ S ++     +     + G+L  M  
Sbjct: 76  NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG   N+++   LLKG        +A  L   M R   +P+V +Y+T+I G C    +++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ ++ +M+ + C  ++ T+  LID F KAG +  A      M   G   ++V YT +++
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C      +  +L +++      P  +T+NT I+G C  G++  A ++ + M +    P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ TY  L+DGL  V + KEA +L+  + +   + N VTYN I++ +C+ G+V +A +++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD-RIRGGGEWNPDIISYTSLLWGIC 527
             M    T+ D IT+NI++   C +G ++ A +LL   ++     +PD+ISY +L+ G+C
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
               + +A      ++ +    +  T N+L+ S
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/465 (24%), Positives = 207/465 (44%), Gaps = 7/465 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +  ++D     L++MK  G+     V+ S+I  +   G  ++   +F  + E G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++       +    + I+  M   G+ PNV+TY  L+  LC   +   A 
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
           +LL  M  K   P+AV+Y  I++ +CK G V +A E+       R       YN L+ GL
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 176 CKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C +  ++EA  LL  M+      DP+VI+Y+ +I  LC    +  +L I   +  +    
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +   LL   L  G  ++A +LW ++     + N   Y+ +I G C  G ++ A  + 
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M  +   P+V  Y+ L+    K G+L  A +++  M  +   P+VV++  M+    + 
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A SL+  M+     P+  T++  I      G +D A+   D+M      P+    
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           + +L   +      +  ELV ++    I L+     T++  +C +
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           A + L+  L  + + + A S   +M E     N  + S L++ + +      A  +   M
Sbjct: 74  AGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALM 133

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  G + NV  +  ++K LC+N    +A SL+ +M   +  P+  ++NT I+G C    +
Sbjct: 134 LKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKEL 193

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A++L ++MK   C  ++ T+  L+D   +  ++ EA   + E++  G++ ++V Y ++
Sbjct: 194 EKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G C  G +     L  ++L  G    AIT+N +I  +CK G++  A ++ + +   G 
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG- 312

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             P++ +YT L+ G+C  G  +EA   L  M+ +   PN  T+N+++  L
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKL 362


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 257/501 (51%), Gaps = 12/501 (2%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           + H +   L + +   I+   ++   D M  ++F++N LL  L K       + L  +M 
Sbjct: 59  FQHGIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMH 118

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEE---ARELAMRFG--SGVSVYNALINGLCKEHKIE 182
             G  PD ++   +++ +C + ++ E   A    MR G    V  +  LI GLC EH+I 
Sbjct: 119 LAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRII 178

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM------FVRGCNPNIH 236
           EA  L   M   G  PNV+TY T+I  LC +GN+  +L    +M      +V  C PN+ 
Sbjct: 179 EATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVI 238

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S++ ++ G    G   EA  L+N M+ +G  PNVV +S LI  LC  G + +A  +   M
Sbjct: 239 SYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMM 298

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +    PN+ TY++LI GF   G+L  A +++  M S G  P+V++Y  ++   C+    
Sbjct: 299 IQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKV 358

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L  +M      P+  T    +K L   G+VD A +L   +K Y    ++      
Sbjct: 359 EEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIF 418

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           LDGL +   + EA +L  E+E   ++L+I T+  ++ G+C+AG +  A++L  K+  EG 
Sbjct: 419 LDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGI 478

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + DA+ ++ +I+ +CK+G+V+ A  L  ++   G  +PD+I+Y+ L+ G   S  +++  
Sbjct: 479 QPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG-CSPDLITYSILMRGFYESNKLEKVV 537

Query: 537 IYLQKMLNEGICPNFATWNVL 557
             L +M+ + + P+   + ++
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIV 558



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/487 (29%), Positives = 240/487 (49%), Gaps = 12/487 (2%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N +L  L     +S +  +Y  M   G+ P++ T NIL+  LC  NR++     +  + 
Sbjct: 94  FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIE 182
            +G  PD V++TT++  +C   ++ EA +L MR         V  Y  LI GLC    I 
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 183 EAFWLLCEMVDR------GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
            A     EM++          PNVI+YS II  LC VGN E ++ +  +M  +G  PN+ 
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV 273

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +F+ L+      G+  +A  L   MI+ G +PN+  Y++LI G C  G ++ A  +   M
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
                 P+V +Y+ LI+G+ K   +  A +++N M+  G  P+V     ++K L      
Sbjct: 334 PSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  L   +     P +      F+ GLC  G +  AMKL ++++ Y    +I T+  L
Sbjct: 394 DDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCL 453

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +DGL +  +++ A+EL  ++ + GIQ + + Y++++HG C+ G V +A  L  KM   G 
Sbjct: 454 IDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGC 513

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             D IT++I++  + +  K+   +QLL R+     W PD   Y  +   +C     +E  
Sbjct: 514 SPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVW-PDDGIYAIVEDMVCKDEKYKEWL 572

Query: 537 IYLQKML 543
             LQ+  
Sbjct: 573 DLLQRFF 579



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 238/482 (49%), Gaps = 53/482 (10%)

Query: 132 APDAVSYTTIVSSI---CKLG-----QVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
           +P+ +S+   +      CK G     Q  +  +L MR    +  +N L+ GL K     +
Sbjct: 53  SPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR---SIFSFNRLLAGLAKIEHYSQ 109

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
            F L  +M   G+ P+++T + +I+ LC+V  +   L  +  +  RG  P++ +FT+L+K
Sbjct: 110 VFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIK 169

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP- 302
           G  +  R  EA+ L+ RM + G  PNVV Y TLI GLC+ G+++ A+    +M  ++ P 
Sbjct: 170 GLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPY 229

Query: 303 -----PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                PNV +YS +IDG  K GN   A  ++N M+  G  PNVV ++ ++ +LC+     
Sbjct: 230 VFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVI 289

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  L+E M      PN  T+ + IKG C  G ++ A +L   M      P++ +YN L+
Sbjct: 290 KAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLI 349

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH------------------------ 453
           +G  +  +V+EA +L  E+   G+  ++ T   +L                         
Sbjct: 350 NGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMP 409

Query: 454 -----------GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
                      G+C+ G + EA +L  ++     KLD  TF  +I   CK GK+  A +L
Sbjct: 410 KDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWEL 469

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +++   G   PD ++Y+S++ G C  G + +A I  QKM   G  P+  T+++L+R  +
Sbjct: 470 FEKLYEEG-IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFY 528

Query: 563 SN 564
            +
Sbjct: 529 ES 530



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 256/518 (49%), Gaps = 25/518 (4%)

Query: 13  GVQYLLQQMKVEGVSCSEG-----VFISVINSYRRV--GLAE-----QALKMFYRIREFG 60
           G+   L + K   +S ++      + +  I S+ R+  GLA+     Q   ++ ++   G
Sbjct: 62  GIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAG 121

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P +   N +++ L   NR +      + + R G  P+V T+  L+K LC  +R+  A 
Sbjct: 122 LWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEAT 181

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----------VYN 169
           KL + M   GC P+ V+Y T++  +C LG +  A +      +  S            Y+
Sbjct: 182 KLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYS 241

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            +I+GLCK    EEA  L  EMVD+G+ PNV+T+S +I  LC  G V  +  +L  M   
Sbjct: 242 IIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQI 301

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN+ ++TSL+KG+ L G  + A +L+  M  +G+ P+V++Y+ LI+G C    ++EA
Sbjct: 302 GIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEA 361

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM-VK 348
           + +  +M      P+V T   L+     AG +  A +++ R+I     P  +   C+ + 
Sbjct: 362 MKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELF-RVIKPYAMPKDLCICCIFLD 420

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+N    +A  L  ++   N   +  TF   I GLC  G+++ A +L +++ +    P
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +   Y+ ++ G  +  +V +A  L  ++E+ G   +++TY+ ++ G   +  + +  QLL
Sbjct: 481 DAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLL 540

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            +M+ +    D   + I+    CK  K    + LL R 
Sbjct: 541 HRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF 578



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 222/472 (47%), Gaps = 11/472 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM + G+         +IN    V    + L     I   G  P V  +  ++  L 
Sbjct: 113 LYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLC 172

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK------G 130
            E+R      ++  M++ G  PNV TY  L+K LC    ++ A K   EM N        
Sbjct: 173 VEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFN 232

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           C P+ +SY+ I+  +CK+G  EEA       +       V  ++ LI+ LCKE ++ +A 
Sbjct: 233 CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAK 292

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL  M+  GI PN+ TY+++I   C VG++ ++  +   M  +G  P++ S+  L+ GY
Sbjct: 293 KLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGY 352

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               +  EA  L+N M+  G  P+V     L+  L   G +D+A  +   ++  + P ++
Sbjct: 353 CKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDL 412

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
                 +DG  K G +  A +++N + S     ++  + C++  LC+      A  L EK
Sbjct: 413 CICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEK 472

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +  E   P+ + +++ I G C  G+VD A  L  +M++  C P++ TY+ L+ G    N+
Sbjct: 473 LYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNK 532

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +++  +L+  + +  +  +   Y  +   VC+     E   LL +  ++  +
Sbjct: 533 LEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHR 584



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 143/284 (50%), Gaps = 19/284 (6%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ +++ L+ G AK  +      ++ +M   G  P+++    ++  LC  N  ++  + +
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             +      P+ VTF T IKGLC   R+  A KL  +M++  C PN+ TY  L+ GL  +
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 424 NRVKEAFELVTEIEK------CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             +  A +   E+           + N+++Y+ I+ G+C+ G   EA  L  +M+ +G +
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +TF+++I   CK+G+V  A +LL+ +   G   P++ +YTSL+ G C  G +  A  
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIG-IVPNLFTYTSLIKGFCLVGDLNSAKE 328

Query: 538 YLQKMLNEGICPNFATWNVLVR------------SLFSNLGHLG 569
               M ++G  P+  ++N+L+              LF+ + H+G
Sbjct: 329 LFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVG 372



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 140/293 (47%), Gaps = 5/293 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++   + LL+ M   G+  +   + S+I  +  VG    A ++F  +   G
Sbjct: 278 LIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKG 337

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  YN +++      +      +++ M   GM P+V T  +LLKAL    +VD A 
Sbjct: 338 YEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAK 397

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L   +       D       +  +CK G + EA +L     S      +  +  LI+GL
Sbjct: 398 ELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGL 457

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+E A+ L  ++ + GI P+ + YS++I   C  G V+ +  +  +M   GC+P++
Sbjct: 458 CKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDL 517

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            +++ L++G+    +  +   L +RMI +   P+   Y+ +   +C +    E
Sbjct: 518 ITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKE 570


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 259/542 (47%), Gaps = 56/542 (10%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           ++E    +  VF  +I ++  +GL E+AL ++Y++    + P ++  N +LD L+ + RF
Sbjct: 118 RLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRF 174

Query: 82  SMINPIYSNMKRDGMEPNVFT-----------------------------------YNIL 106
             +  +Y +M   G  PNV T                                   Y IL
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSG- 164
           ++ LC  +R+  A  +   M N G  P+  +Y T++   CK+  V++A EL     G G 
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGL 294

Query: 165 ---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  +  LI+GLCK  ++  A   L +M   G+ PN+  Y+ +I   C  GN+  +L 
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  ++      P++ +++ L+KG     R  EA  L   M ++GFLPN V Y+TLI G C
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G+M++A+ V  QM E    PN+ T+S LIDG+ KAG +  A  ++  M+  G  P+VV
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL--- 398
           AYT ++    ++    +A  L ++M      PN  T +  I GLC  GR+  A+KL    
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAK 534

Query: 399 ----------DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
                     +++ +  C PN   Y  L+ GL    R+ +A +  +++   G++ ++ T 
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             I+ G  RA  + +   L   +L  G   ++  + ++   Y + G + +A++  + + G
Sbjct: 595 IVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSG 654

Query: 509 GG 510
            G
Sbjct: 655 IG 656



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 233/484 (48%), Gaps = 18/484 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K   D +  +   M   G S +   + ++I+   R G   +A ++F  + E  
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV IY  ++  L  E+R S    ++  M+  GM PN++TYN ++   CK   V  A 
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L  EM   G  P+ V++  ++  +CK  ++  AR+  +   S      + VYN LI+G 
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + EA  L  E+    I P+V TYS +I  LC V  +E + G+L +M  +G  PN 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ GY   G   +A ++ ++M  +G  PN++ +STLI G C  G M+ A+ +  +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+V  Y+ALIDG  K GN   A ++   M   G  PNV   +C++  LC++  
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523

Query: 356 FHQAHSLI-------------EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
              A  L               ++    C PN V +   I+GLC  GR+  A K    M+
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                P++ T   ++ G  R   +++   L  +I K GI  N   Y  +  G   +G + 
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643

Query: 463 EAFQ 466
            A +
Sbjct: 644 SALR 647



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 195/412 (47%), Gaps = 18/412 (4%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A  MF  +R  G+ P +  YN ++D             +Y  M  DG+ PNV T+ IL+
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS---- 163
             LCK + +  A K L++M + G  P+   Y  ++   CK G + EA  L          
Sbjct: 306 DGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEIL 365

Query: 164 -GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V  Y+ LI GLC   ++EEA  LL EM  +G  PN +TY+T+I   C  GN+E ++ +
Sbjct: 366 PDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEV 425

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             QM  +G  PNI +F++L+ GY   G+   A  L+  M+ +G LP+VVAY+ LI G   
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFK 485

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-------------N 329
           +G+  EA  +  +M+E    PNV T S LIDG  K G +  A +++             N
Sbjct: 486 DGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTN 545

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            +  + CSPN V YT +++ LC +    +A      M      P+  T    I+G     
Sbjct: 546 ELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAM 605

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
            +   M L   + +   +PN + Y  L  G      +K A     ++   GI
Sbjct: 606 HLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 6/380 (1%)

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F +L  +      PNV  +  +I +  ++G VE +L +  +M V    P + +   +L G
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDG 167

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            +  GR      ++  M+  G  PNVV Y TLI G C  G   +A  +  +M E    P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V  Y+ LI G      +  A  ++  M ++G  PN+  Y  M+   C+     +A  L +
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   PN VTF   I GLC    +  A K L  M  +  +PNI  YN L+DG  +  
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            + EA  L +EIEK  I  ++ TY+ ++ G+C    + EA  LL +M  +G   +A+T+N
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  YCK+G +  AI++  ++   G   P+II++++L+ G C +G M+ A     +M+ 
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKG-IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 545 EGICPNFATWNVLVRSLFSN 564
           +G+ P+   +  L+   F +
Sbjct: 467 KGLLPDVVAYTALIDGHFKD 486


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 264/554 (47%), Gaps = 60/554 (10%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           +YN +L A L E RF ++  +Y ++   G  P+VFT NILL+ALC   R++ A ++   M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 127 GNK---------------GCAPDAVSY------------TTIVSSICKLGQVEEARELAM 159
             +               G + DA+               T+V+  C+ GQV+EA  L  
Sbjct: 177 PERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVE 236

Query: 160 R-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD---RGID-PNVITYSTIISSL 210
           R         V  +NA I+ LCK  ++ +A+ +  +M +   RG+  P+ +T+  ++S  
Sbjct: 237 RMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGF 296

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C+ G V+ +  ++  M   G    + S+   L G +  G   EA +L   M  EG  PN 
Sbjct: 297 CEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNS 356

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ ++ GLC  G   +   V   ++     P+V TY++L+  +   GN   A++I + 
Sbjct: 357 YTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDE 416

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   GC+PN   Y  +++ L +     +A  L+E+M+ +    +T + N  I GLC   +
Sbjct: 417 MAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNK 476

Query: 391 VDWAMKLLDQM-----------------------KQYECLPNITTYNELLDGLLRVNRVK 427
           +D AM ++D M                           CLP+  TY+ L+  L +  R  
Sbjct: 477 LDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFD 536

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA + + E+    I  + V Y+T +HG C+ G    A ++L  M  +G K    T+N++I
Sbjct: 537 EAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLI 596

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
           + + ++   +  ++L+  ++G G   P++++Y SL+   C  G + +A   L +ML   I
Sbjct: 597 WGFREKHNSDEILKLISEMKGKG-ICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEI 655

Query: 548 CPNFATWNVLVRSL 561
            PN  ++ +L+++ 
Sbjct: 656 VPNITSFELLIKAF 669



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 231/478 (48%), Gaps = 38/478 (7%)

Query: 63  PTVKIY--NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           PT+ +   N ++     E +      +   M+ +G+ PNV T+N  + ALCK  RV  AY
Sbjct: 208 PTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAY 267

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEARELA--MRFG---SGVSVYNAL 171
           ++  +M  K       PD V++  ++S  C+ G V+EAR L   MR G     V  YN  
Sbjct: 268 RIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRW 327

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG- 230
           ++GL +   + EA  LL EM   G+ PN  TY+ I+  LC  G       +  + FV+  
Sbjct: 328 LSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKV--EDFVKSG 385

Query: 231 -CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
              P++ ++TSLL  Y   G    A+ + + M ++G  PN   Y+ L+  L   G + EA
Sbjct: 386 VMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEA 445

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-------------- 335
             +  +M E     +  + + +IDG  +   L  A  I + M + G              
Sbjct: 446 ERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSL 505

Query: 336 ---------CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
                    C P+ + Y+ +V  LC+   F +A   + +M  ++  P++V ++TFI G C
Sbjct: 506 LTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYC 565

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+   A+K+L  M++  C P+  TYN L+ G    +   E  +L++E++  GI  N++
Sbjct: 566 KHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVM 625

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           TYN+++   C  GMV +A  LL +ML      +  +F ++I A+CK    + A ++ D
Sbjct: 626 TYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD 683



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 250/567 (44%), Gaps = 36/567 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR---EFGL-KPTV 65
           ++D  + L+++M+ EG++ +   F + I++  + G    A ++F  ++   E GL +P  
Sbjct: 227 QVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQ 286

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             ++ +L              +   M+  G    V +YN  L  L +N  V  A +LL E
Sbjct: 287 VTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLRE 346

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHK 180
           M ++G  P++ +Y  IV  +CK G+  + R++     SGV       Y +L++  C E  
Sbjct: 347 MAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGN 406

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
              A  +L EM  +G  PN  TY+ ++ SL   G +  +  +L +M  +G + +  S   
Sbjct: 407 AAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNI 466

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGF-----------------------LPNVVAYSTLI 277
           ++ G     +   A D+ + M  EG                        LP+ + YSTL+
Sbjct: 467 IIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLV 526

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC  G  DEA     +M      P+   Y   I G+ K G    A ++   M   GC 
Sbjct: 527 SALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCK 586

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+   Y  ++    + +   +   LI +M  +   PN +T+N+ IK  C  G V+ AM L
Sbjct: 587 PSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPL 646

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV-TEIEKCGIQLNIVTYNTILHGVC 456
           LD+M Q E +PNIT++  L+    + +    A  +    +  CG +   V Y+ +   + 
Sbjct: 647 LDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKE--VLYSLMCTQLS 704

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
             G  +EA  +L  +L     +    +  II   CK  +V++  +LL  +   G ++ D 
Sbjct: 705 TYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKG-YSFDP 763

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKML 543
            ++  ++  +   G  Q   +  QKM+
Sbjct: 764 AAFMPVIDALSERGKKQHVDMLSQKMM 790



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 226/522 (43%), Gaps = 40/522 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  +++ +   G+ ++A  +   +R  G    V+ YN  L  L+          +   M
Sbjct: 288 TFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREM 347

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             +G++PN +TYNI++  LCK  +     K+   + +    PD V+YT+++ + C  G  
Sbjct: 348 AHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNA 407

Query: 152 EEAR----ELAMRFGSGVS-VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A     E+A +  +  S  YN L+  L K  +I EA  LL  M ++G   +  + + I
Sbjct: 408 AAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNII 467

Query: 207 ISSLCDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLK 243
           I  LC    ++ ++ I+  M+  G                       C P+  ++++L+ 
Sbjct: 468 IDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVS 527

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                GR  EA      MI +   P+ V Y T IHG C +G    AV V   ME+  C P
Sbjct: 528 ALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKP 587

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY+ LI GF +  N     ++ + M   G  PNV+ Y  ++K  C+  M ++A  L+
Sbjct: 588 STRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLL 647

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           ++M      PN  +F   IK  C       A ++ D      C      Y+ +   L   
Sbjct: 648 DEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDA-SLSTCGQKEVLYSLMCTQLSTY 706

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R  EA  ++  + +  I ++   Y  I+ G+C+   V    +LL  ++++G   D   F
Sbjct: 707 GRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAF 766

Query: 484 NIIIYAYCKQGKVNNA-------IQLLDRIRG----GGEWNP 514
             +I A  ++GK  +        +++ +R  G     GE+ P
Sbjct: 767 MPVIDALSERGKKQHVDMLSQKMMEMAERDNGLAAPSGEFKP 808



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 168/330 (50%), Gaps = 15/330 (4%)

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +  LL   L   R      L+  ++  G  P+V   + L+  LC+ G M+ A  V   M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E     N  ++  L  G+ +AG  + A  + + M +     N+V    +V   C+     
Sbjct: 178 ER----NEFSFGILARGYCRAGRSMDALGVLDSMPTM----NLVVCNTVVAGFCREGQVD 229

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ-YE---CLPNITTY 413
           +A  L+E+M  E   PN VTFN  I  LC  GRV  A ++ + M++ +E     P+  T+
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTF 289

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV-TYNTILHGVCRAGMVVEAFQLLGKML 472
           + +L G      V EA  LV +I +CG  L  V +YN  L G+ R GMV EA +LL +M 
Sbjct: 290 DVMLSGFCEAGMVDEARVLV-DIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMA 348

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            EG + ++ T+NII+   CK+GK  +  ++ D ++ G    PD+++YTSLL   C+ G  
Sbjct: 349 HEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSG-VMTPDVVTYTSLLHAYCSEGNA 407

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             A   L +M  +G  PN  T+NVL++SL+
Sbjct: 408 AAANRILDEMAQKGCAPNSFTYNVLLQSLW 437



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 12/242 (4%)

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++    Q   F    SL + +      P+  T N  ++ LC  GR++ A ++ D M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +     N  ++  L  G  R  R  +A  ++  +      +N+V  NT++ G CR G V 
Sbjct: 178 ER----NEFSFGILARGYCRAGRSMDALGVLDSMP----TMNLVVCNTVVAGFCREGQVD 229

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW---NPDIISY 519
           EA +L+ +M  EG   + +TFN  I A CK G+V +A ++ + ++   E     PD +++
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTF 289

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
             +L G C +G + EA + +  M   G      ++N  +  L  N G +G    L   MA
Sbjct: 290 DVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN-GMVGEAQELLREMA 348

Query: 580 NK 581
           ++
Sbjct: 349 HE 350



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 10/269 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++   D  +  L +M  + +S    ++ + I+ Y + G    A+K+   + + G
Sbjct: 525 LVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKG 584

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP+ + YN ++     ++    I  + S MK  G+ PNV TYN L+K+ C+   V+ A 
Sbjct: 585 CKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAM 644

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-------VYNALIN 173
            LL EM      P+  S+  ++ + CK      A+ +   F + +S       +Y+ +  
Sbjct: 645 PLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRV---FDASLSTCGQKEVLYSLMCT 701

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
            L    +  EA  +L  +++  I  +   Y  II  LC V  V+    +L  + V+G + 
Sbjct: 702 QLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSF 761

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           +  +F  ++      G+      L  +M+
Sbjct: 762 DPAAFMPVIDALSERGKKQHVDMLSQKMM 790


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 267/534 (50%), Gaps = 13/534 (2%)

Query: 52   MFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC 111
            + Y  +++G  P  ++++     L+          ++  M   G+  +V + N+ L  L 
Sbjct: 607  LVYTYKDWGSDP--RVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLS 664

Query: 112  KN-NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGV 165
            K+  +   A  +  E    G   +  SY  ++  +C+LG+++EA  L +      +   V
Sbjct: 665  KDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 724

Query: 166  SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
              Y+ ++NG C+  ++++ + L+  M  +G+ PN   Y +II  LC +  +  +     +
Sbjct: 725  ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 784

Query: 226  MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
            M  +G  P+   +T+L+ G+   G    AS  +  M      P+V+ Y+ +I G C  G 
Sbjct: 785  MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844

Query: 286  MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
            M EA  + ++M      P+  T++ LI+G+ KAG++  A ++ N MI  GCSPNVV YT 
Sbjct: 845  MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904

Query: 346  MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
            ++  LC+      A+ L+ +M      PN  T+N+ + GLC  G ++ A+KL+ + +   
Sbjct: 905  LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 964

Query: 406  CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
               +  TY  L+D   +   + +A E++ E+   G+Q  IVT+N +++G C  GM+ +  
Sbjct: 965  LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1024

Query: 466  QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNPDIISYTSLL 523
            +LL  ML +G   +A TFN ++  YC +  +  A  +   +  RG G   PD  +Y +L+
Sbjct: 1025 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG---PDGKTYENLV 1081

Query: 524  WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
             G C +  M+EA+   Q+M  +G   + +T++VL++        L    + D +
Sbjct: 1082 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/467 (29%), Positives = 240/467 (51%), Gaps = 5/467 (1%)

Query: 49   ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
            A+ +F    E G+   V  YN ++  +    R    + +   M+  G  P+V +Y+ ++ 
Sbjct: 673  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 109  ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS---SICKLGQVEEARELAMRFG--S 163
              C+   +D  +KL+  M  KG  P++  Y +I+     ICKL + EEA    +R G   
Sbjct: 733  GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 164  GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
               VY  LI+G CK   I  A     EM  R I P+V+TY+ IIS  C +G++  +  + 
Sbjct: 793  DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 224  GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             +MF +G  P+  +FT L+ GY   G   +A  + N MI+ G  PNVV Y+TLI GLC  
Sbjct: 853  HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 284  GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
            G +D A  + ++M +    PN+ TY+++++G  K+GN+  A ++     + G + + V Y
Sbjct: 913  GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 972

Query: 344  TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            T ++   C++    +A  ++++M  +   P  VTFN  + G C  G ++   KLL+ M  
Sbjct: 973  TTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 1032

Query: 404  YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
                PN TT+N L+      N +K A  +  ++   G+  +  TY  ++ G C+A  + E
Sbjct: 1033 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 1092

Query: 464  AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            A+ L  +M  +G  +   T++++I  + K+ K   A ++ D++R  G
Sbjct: 1093 AWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 1139



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 231/476 (48%), Gaps = 5/476 (1%)

Query: 36   VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            VI+   ++G  ++A  +   +   G  P V  Y+ +++          +  +   MKR G
Sbjct: 695  VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 754

Query: 96   MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            ++PN + Y  ++  LC+  ++  A +   EM  +G  PD V YTT++   CK G +  A 
Sbjct: 755  LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814

Query: 156  ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            +      S      V  Y A+I+G C+   + EA  L  EM  +G++P+ +T++ +I+  
Sbjct: 815  KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 874

Query: 211  CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
            C  G+++ +  +   M   GC+PN+ ++T+L+ G    G    A++L + M + G  PN+
Sbjct: 875  CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 934

Query: 271  VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
              Y+++++GLC +G+++EAV +  + E      +  TY+ L+D + K+G +  A +I   
Sbjct: 935  FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 994

Query: 331  MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
            M+  G  P +V +  ++   C + M      L+  M  +   PN  TFN+ +K  C    
Sbjct: 995  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054

Query: 391  VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            +  A  +   M      P+  TY  L+ G  +   +KEA+ L  E++  G  +++ TY+ 
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114

Query: 451  ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            ++ G  +    +EA ++  +M  EG   D   F+       K  + +  +  +D I
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 215/436 (49%), Gaps = 5/436 (1%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            I    +LL  M+++G +     + +V+N Y R G  ++  K+   ++  GLKP   IY  
Sbjct: 705  IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 764

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            I+  L    + +     +S M R G+ P+   Y  L+   CK   +  A K   EM ++ 
Sbjct: 765  IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 824

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAF 185
              PD ++YT I+S  C++G + EA +L    F  G+      +  LING CK   +++AF
Sbjct: 825  ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 884

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             +   M+  G  PNV+TY+T+I  LC  G+++++  +L +M+  G  PNI ++ S++ G 
Sbjct: 885  RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 944

Query: 246  LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               G   EA  L       G   + V Y+TL+   C +G MD+A  +  +M      P +
Sbjct: 945  CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004

Query: 306  TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             T++ L++GF   G L    ++ N M++ G +PN   +  +VK  C  N    A ++ + 
Sbjct: 1005 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064

Query: 366  MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
            M      P+  T+   +KG C    +  A  L  +MK      +++TY+ L+ G L+  +
Sbjct: 1065 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 1124

Query: 426  VKEAFELVTEIEKCGI 441
              EA E+  ++ + G+
Sbjct: 1125 FLEAREVFDQMRREGL 1140



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 209/432 (48%), Gaps = 5/432 (1%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            E+D V  L++ MK +G+  +  ++ S+I    R+    +A + F  +   G+ P   +Y 
Sbjct: 739  ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++D           +  +  M    + P+V TY  ++   C+   +  A KL  EM  K
Sbjct: 799  TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 858

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEA 184
            G  PD+V++T +++  CK G +++A  +            V  Y  LI+GLCKE  ++ A
Sbjct: 859  GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              LL EM   G+ PN+ TY++I++ LC  GN+E ++ ++G+    G N +  ++T+L+  
Sbjct: 919  NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            Y   G   +A ++   M+ +G  P +V ++ L++G C +G +++   +   M      PN
Sbjct: 979  YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TT+++L+  +    NL  A+ I+  M S G  P+   Y  +VK  C+     +A  L +
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +M  +    +  T++  IKG     +   A ++ DQM++     +   ++   D   +  
Sbjct: 1099 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 1158

Query: 425  RVKEAFELVTEI 436
            R     + + EI
Sbjct: 1159 RPDTIVDPIDEI 1170



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 187/398 (46%), Gaps = 5/398 (1%)

Query: 9    CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
            C++   +    +M  +G+     V+ ++I+ + + G    A K FY +    + P V  Y
Sbjct: 773  CKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 832

Query: 69   NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
              I+              ++  M   G+EP+  T+  L+   CK   +  A+++   M  
Sbjct: 833  TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892

Query: 129  KGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEE 183
             GC+P+ V+YTT++  +CK G ++ A EL      +     +  YN+++NGLCK   IEE
Sbjct: 893  AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 952

Query: 184  AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
            A  L+ E    G++ + +TY+T++ + C  G ++ +  IL +M  +G  P I +F  L+ 
Sbjct: 953  AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012

Query: 244  GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            G+ L G   +   L N M+ +G  PN   +++L+   C   ++  A ++   M      P
Sbjct: 1013 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 1072

Query: 304  NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            +  TY  L+ G  KA N+  A  ++  M   G S +V  Y+ ++K   +   F +A  + 
Sbjct: 1073 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 1132

Query: 364  EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            ++M  E    +   F+ F        R D  +  +D++
Sbjct: 1133 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 1170



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 171/344 (49%), Gaps = 5/344 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+   ++ +I        +M    ++     + ++I+ + ++G   +A K+F+ +   G
Sbjct: 800  LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            L+P    +  +++             ++++M + G  PNV TY  L+  LCK   +D A 
Sbjct: 860  LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            +LL EM   G  P+  +Y +IV+ +CK G +EEA +L   F +         Y  L++  
Sbjct: 920  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            CK  ++++A  +L EM+ +G+ P ++T++ +++  C  G +E    +L  M  +G  PN 
Sbjct: 980  CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +F SL+K Y +      A+ ++  M   G  P+   Y  L+ G C   +M EA  +  +
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 1099

Query: 296  MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            M+      +V+TYS LI GF K    L A +++++M   G + +
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/545 (27%), Positives = 259/545 (47%), Gaps = 63/545 (11%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           ++E    +  VF  +I ++  +GL E+AL ++Y++    + P ++  N +LD L+ + RF
Sbjct: 118 RLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRF 174

Query: 82  SMINPIYSNMKRDGMEPNVFT-----------------------------------YNIL 106
             +  +Y +M   G  PNV T                                   Y IL
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSG- 164
           ++ LC  +R+  A  +   M N G  P+  +Y T++   CK+  V++A EL     G G 
Sbjct: 235 IRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGL 294

Query: 165 ---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  +  LI+GLCK  ++  A   L +M   G+ PN+  Y+ +I   C  GN+  +L 
Sbjct: 295 LPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALS 354

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  ++      P++ +++ L+KG     R  EA  L   M ++GFLPN V Y+TLI G C
Sbjct: 355 LHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYC 414

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G+M++A+ V  QM E    PN+ T+S LIDG+ KAG +  A  ++  M+  G  P+VV
Sbjct: 415 KEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVV 474

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL--- 398
           AYT ++    ++    +A  L ++M      PN  T +  I GLC  GR+  A+KL    
Sbjct: 475 AYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAK 534

Query: 399 ----------DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
                     +++ +  C PN   Y  L+ GL    R+ +A +  +++   G++ ++ T 
Sbjct: 535 TGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTC 594

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA-------IQ 501
             I+ G  RA  + +   L   +L  G   ++  + ++   Y + G + +A       +Q
Sbjct: 595 IVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQ 654

Query: 502 LLDRI 506
            LDR+
Sbjct: 655 PLDRV 659



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 234/488 (47%), Gaps = 18/488 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K   D +  +   M   G S +   + ++I+   R G   +A ++F  + E  
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV IY  ++  L  E+R S    ++  M+  GM PN++TYN ++   CK   V  A 
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L  EM   G  P+ V++  ++  +CK  ++  AR+  +   S      + VYN LI+G 
Sbjct: 284 ELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + EA  L  E+    I P+V TYS +I  LC V  +E + G+L +M  +G  PN 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ GY   G   +A ++ ++M  +G  PN++ +STLI G C  G M+ A+ +  +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+V  Y+ALIDG  K GN   A ++   M   G  PNV   +C++  LC++  
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523

Query: 356 FHQAHSLI-------------EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
              A  L               ++    C PN V +   I+GLC  GR+  A K    M+
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                P++ T   ++ G  R   +++   L  +I K GI  N   Y  +  G   +G + 
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643

Query: 463 EAFQLLGK 470
            A    G+
Sbjct: 644 SALSFCGE 651



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 264/538 (49%), Gaps = 37/538 (6%)

Query: 46  AEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           A QAL++F+ + R   L    ++Y+ I+  L     ++    +  +              
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRD-------------- 95

Query: 105 ILLKALCKNNRVD---GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
            L++ L K+ R       + +L  + +    P+   +  ++ +  ++G VEEA  +   M
Sbjct: 96  -LIQCLQKSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM 152

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                +   N +++GL K+ + +  + +  +MV RG  PNV+TY T+I   C  G+   +
Sbjct: 153 DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKA 212

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +  +M  +   P +  +T L++G     R  EA  ++  M   G LPN+  Y+T++ G
Sbjct: 213 FRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C    + +A+ +  +M  +   PNV T+  LIDG  K   ++ A +    M S G  PN
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           +  Y C++   C+     +A SL  ++      P+  T++  IKGLCG  R++ A  LL 
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +MK+   LPN  TYN L+DG  +   +++A E+ +++ + GI+ NI+T++T++ G C+AG
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A  L  +M+I+G   D + +  +I  + K G    A +L   ++  G  +P++ + 
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG-LHPNVFTL 511

Query: 520 TSLLWGICNSGGMQEAF-IYLQKM-----------LNEGIC-PNFATWNVLVRSLFSN 564
           + L+ G+C  G + +A  ++L K            L+  +C PN   +  L++ L ++
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTD 569



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 146/695 (21%), Positives = 277/695 (39%), Gaps = 129/695 (18%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +  I   + + + M+  G+  +   + ++++ Y ++   ++AL+++  +   G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG 293

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +  ++D L   +          +M   G+ PN+F YN L+   CK   +  A 
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
            L  E+      PD  +Y+ ++  +C + ++EEA  L        F      YN LI+G 
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE  +E+A  +  +M ++GI+PN+IT+ST+I   C  G +E ++G+  +M ++G  P++
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV------------------------- 270
            ++T+L+ G+   G T EA  L   M   G  PNV                         
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533

Query: 271 -----------------------VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                                  V Y+ LI GLC++G + +A      M  +   P+V T
Sbjct: 534 KTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL----- 362
              +I G  +A +L     +   ++  G  PN   Y  + K   ++     A S      
Sbjct: 594 CIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGV 653

Query: 363 --IEKMAFE--------------------NCPPNTVT------------FNTFIK----- 383
             ++++  E                     C  + +T            F+T +K     
Sbjct: 654 QPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPH 713

Query: 384 ---------GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
                    G  G  R + A++L  QM+  +  P+I T    L     +  +     +  
Sbjct: 714 EILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHA 773

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-KLDAITFNIIIYAYCKQ 493
            I   G+  ++   N++++   + G +  A     + L +GT K D  T+  +I  +   
Sbjct: 774 YIRHRGLDTDLCLNNSLINMYSKCGEIGTA-----RRLFDGTQKKDVTTWTSMIVGHALH 828

Query: 494 GKVNNAIQLLDRI----------RGGGEWN-----PDIISYTSLLWGICNSGGMQEAFIY 538
           G+   A+QL   +          +  GE       P+ +++  +L    ++G ++E   +
Sbjct: 829 GQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQH 888

Query: 539 LQKMLNE-GICPNFATWNVLVRSLFSNLGHLGPVY 572
            + M  +  + P  + +  +V  L    G L   Y
Sbjct: 889 FRSMKEDYSLRPRISHFGCMV-DLLCRAGLLTEAY 922



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/525 (20%), Positives = 205/525 (39%), Gaps = 96/525 (18%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           QM  +G+  +   F ++I+ Y + G  E A+ ++  +   GL P V  Y  ++D    + 
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV-------------EM 126
                  ++  M+  G+ PNVFT + L+  LCK+ R+  A KL +             E+
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR-FGSGVSVYN--ALINGLCKEHKI 181
               C+P+ V YT ++  +C  G++ +A +    MR  G    V+    +I G  +   +
Sbjct: 548 DRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHL 607

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG----------------- 224
            +   L  +++  GI PN   Y  +     + G ++++L   G                 
Sbjct: 608 RDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSY 667

Query: 225 ------QMFV----RGCNPN------IHSFT---------------SLLKGYLLGG---- 249
                 Q+ V    + C+ +      IHSF                 +LK     G    
Sbjct: 668 TIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGD 727

Query: 250 -RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R ++A  L+ +M  +   P++V  +  +      G++D    +   +       ++   
Sbjct: 728 QRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLN 787

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           ++LI+ ++K G +  A     R+       +V  +T M+     +    +A  L  +M  
Sbjct: 788 NSLINMYSKCGEIGTA----RRLFDGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKE 843

Query: 369 EN----------------CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ-YECLPNIT 411
            N                  PN VTF   +      G V+   +    MK+ Y   P I+
Sbjct: 844 TNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRIS 903

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
            +  ++D L R   + EA+E +    K  ++ N V + T+L G C
Sbjct: 904 HFGCMVDLLCRAGLLTEAYEFIL---KMPVRPNAVVWRTLL-GAC 944


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 260/509 (51%), Gaps = 26/509 (5%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENR--FSMINPIYSNMKRDGMEPNVFTY 103
              A+  FYR+      P++  +N IL +L+  N   + +   +Y  ++ + + P++ T+
Sbjct: 27  VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTF 86

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LA 158
           N ++   C    +D A+ +L ++   G  PD ++ TT++  +C  G+V EA       +A
Sbjct: 87  NTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIA 146

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
             F      Y  LINGLCK  +   A  +L ++  + ++ NV+ YSTII SLC    V  
Sbjct: 147 RGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTE 206

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  +  QM V+  +P++ +F++L+ G+ + G+  EA  L++ M+     P+V  ++ L+ 
Sbjct: 207 AYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVD 266

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            LC  GS  E  +V   M                    +   +  A  ++N +     +P
Sbjct: 267 ALCKEGSTKETKNVLAVM------------------MKEVNQVNKAKHVFNIIGKRRVTP 308

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V +YT ++K LC+  M  +A SL  +M  +   P+ VT+++ I GLC   R+  A +LL
Sbjct: 309 DVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELL 368

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           DQM       ++ TY   L  L + ++V +A  LV +I+  GIQ NI TYN ++ G+C+ 
Sbjct: 369 DQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKE 428

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G    A  +   +LI+G K+   T+NI+I   C +G  + A+ LL+++   G   PD+++
Sbjct: 429 GRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG-CTPDVVT 487

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
           Y +++  +  +    +A   L++M+  G+
Sbjct: 488 YETIIRALFKNDENHKAEKLLREMIARGL 516



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 212/426 (49%), Gaps = 20/426 (4%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHK--IEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           R L M     +  +N ++  L K +      A  L   +    I P+++T++T+I+  C 
Sbjct: 36  RMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCH 95

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G ++ +  +L ++   G +P+  + T+L+KG  L G+ HEA    + +I  GF  N V+
Sbjct: 96  LGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVS 155

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y  LI+GLC  G    A+ V  +++      NV  YS +ID   K   +  A +++++MI
Sbjct: 156 YGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMI 215

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG--- 389
               SP+VV ++ ++   C    F +A  L  +M   N  P+  TFN  +  LC  G   
Sbjct: 216 VKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTK 275

Query: 390 --------------RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
                         +V+ A  + + + +    P++ +Y  ++  L ++  V EA  L  E
Sbjct: 276 ETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNE 335

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   GI  + VTY++++ G+C++  +  A++LL +M   G   D IT+   ++A CK  +
Sbjct: 336 MRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQ 395

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+ A+ L+ +I+  G   P+I +Y  L+ G+C  G  + A +  Q +L +G      T+N
Sbjct: 396 VDKAVALVKKIKDQG-IQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYN 454

Query: 556 VLVRSL 561
           +++  L
Sbjct: 455 IMINGL 460



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 203/442 (45%), Gaps = 22/442 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  ++++  ++ S   F +VIN Y  +G  + A  +  +I + G  P       ++  L 
Sbjct: 70  LYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLC 129

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +       + ++   G   N  +Y IL+  LCK      A ++L ++  K    + V
Sbjct: 130 LNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVV 189

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+TI+ S+CK   V EA EL       +    V  ++ALI G C   + +EAF L  EM
Sbjct: 190 MYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEM 249

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-----------------VRGCNPN 234
           V   I+P+V T++ ++ +LC  G+ + +  +L  M                   R   P+
Sbjct: 250 VLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPD 309

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +HS+T ++K         EA  L+N M  +G  P+ V YS+LI GLC +  +  A  +  
Sbjct: 310 VHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLD 369

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           QM     P +V TY++ +    K   +  A  +  ++   G  PN+  Y  ++  LC+  
Sbjct: 370 QMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEG 429

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
            F  A  + + +  +       T+N  I GLC  G  D AM LL++M+   C P++ TY 
Sbjct: 430 RFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYE 489

Query: 415 ELLDGLLRVNRVKEAFELVTEI 436
            ++  L + +   +A +L+ E+
Sbjct: 490 TIIRALFKNDENHKAEKLLREM 511



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 183/353 (51%), Gaps = 27/353 (7%)

Query: 9   CEIDGVQYLLQQM-KVEG--VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C++   +  LQ + K++G  V+ +  ++ ++I+S  +  L  +A +++ ++    + P V
Sbjct: 164 CKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDV 223

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN------------ 113
             ++ ++       +F     ++  M    + P+V T+NIL+ ALCK             
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283

Query: 114 -----NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS 166
                N+V+ A  +   +G +   PD  SYT I+  +CK+  V+EA  L   MR   G++
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMR-CKGIT 342

Query: 167 ----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                Y++LI+GLCK  +I  A+ LL +M  RG   +VITY++ + +LC    V+ ++ +
Sbjct: 343 PDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVAL 402

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           + ++  +G  PNI+++  L+ G    GR   A  ++  ++ +G+   V  Y+ +I+GLC 
Sbjct: 403 VKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCL 462

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            G  DEA+++  +ME+N C P+V TY  +I    K      A ++   MI+ G
Sbjct: 463 EGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 164/329 (49%), Gaps = 20/329 (6%)

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLC--SNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           H+A   + RM+R    P+++ ++ ++  L   +N +   A+S+ ++++ N+  P++ T++
Sbjct: 28  HDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFN 87

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +I+ +   G +  A  +  +++  G  P+ +  T ++K LC N   H+A    + +   
Sbjct: 88  TVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIAR 147

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               N V++   I GLC  G    A+++L ++       N+  Y+ ++D L +   V EA
Sbjct: 148 GFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEA 207

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           +EL +++    +  ++VT++ +++G C  G   EAF L  +M++     D  TFNI++ A
Sbjct: 208 YELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDA 267

Query: 490 YCKQG-----------------KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            CK+G                 +VN A  + + I G     PD+ SYT ++  +C    +
Sbjct: 268 LCKEGSTKETKNVLAVMMKEVNQVNKAKHVFN-IIGKRRVTPDVHSYTIIIKRLCKIKMV 326

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            EA     +M  +GI P+  T++ L+  L
Sbjct: 327 DEALSLFNEMRCKGITPDKVTYSSLIDGL 355



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 120/236 (50%), Gaps = 5/236 (2%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           + V    +A  +F  I +  + P V  Y  I+  L           +++ M+  G+ P+ 
Sbjct: 286 KEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDK 345

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
            TY+ L+  LCK+ R+  A++LL +M  +G   D ++YT+ + ++CK  QV++A  L  +
Sbjct: 346 VTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKK 405

Query: 161 FGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                    ++ YN LI+GLCKE + E A  +  +++ +G    V TY+ +I+ LC  G 
Sbjct: 406 IKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGL 465

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            + ++ +L +M   GC P++ ++ ++++        H+A  L   MI  G L   V
Sbjct: 466 FDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKV 521



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 81/157 (51%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I     LL QM   G       + S +++  +    ++A+ +  +I++ G
Sbjct: 351 LIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQG 410

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  YN ++D L  E RF     I+ ++   G +  V+TYNI++  LC     D A 
Sbjct: 411 IQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAM 470

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            LL +M + GC PD V+Y TI+ ++ K  +  +A +L
Sbjct: 471 TLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKL 507



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 30/230 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +   +D    L  +M+ +G++  +  + S+I+   +      A ++  ++   G
Sbjct: 316 IIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARG 375

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y   L AL   ++      +   +K  G++PN+ TYNIL+  LCK  R + A 
Sbjct: 376 QPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQ 435

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  ++  KG      +Y  +++ +C                         + GL     
Sbjct: 436 VIFQDLLIKGYKVTVWTYNIMINGLC-------------------------LEGL----- 465

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
            +EA  LL +M D G  P+V+TY TII +L        +  +L +M  RG
Sbjct: 466 FDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARG 515



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    L++++K +G+  +   +  +I+   + G  E A  +F  +   G K TV  YN
Sbjct: 395 QVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYN 454

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L  E  F     +   M+ +G  P+V TY  +++AL KN+    A KLL EM  +
Sbjct: 455 IMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514

Query: 130 GCAPDAV 136
           G   + V
Sbjct: 515 GLLEEKV 521


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 255/520 (49%), Gaps = 10/520 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G+ +QA  +  + +  G  P +   N +++ L+   +  M   IY  +K  G+ PN +TY
Sbjct: 163 GMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTY 222

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---- 159
            I +K  C+   +  A  +  +M   G  P++ SYTT +  +C  G+ +   ++      
Sbjct: 223 TIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVIN 282

Query: 160 -RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            +    V  Y  +I G C E K++EA  +L EM  +G  P+V  Y  +IS  C VGN+  
Sbjct: 283 AKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLK 342

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L +  +M  +G   N    +S+L+G    G   E ++ +    + G   +   Y+ ++ 
Sbjct: 343 ALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMD 402

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            LC  G ++EAV +  +M+     P++  Y+ +I G+   G ++ A  I+  M   G  P
Sbjct: 403 ALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKP 462

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++V Y  +     +N +  +A SL+  M  +   P+TVT N  I+GLC  G+VD A    
Sbjct: 463 DIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFF 522

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D +++ +CL N   Y+ +++G    N V +AF L+  + K G  L   ++  +L  +C  
Sbjct: 523 DNLEE-KCLEN---YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSE 578

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G   +A  LL  M+        I ++ +I A  + G++  A  + + +   G   PD+I+
Sbjct: 579 GDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRG-LAPDVIT 637

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           YT ++ G C    M+EA+  L  M N GI P+  T+ VL+
Sbjct: 638 YTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLL 677



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 155/612 (25%), Positives = 291/612 (47%), Gaps = 60/612 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +L E  ++D    + +Q+K  G++ ++  +   I  + R G   +A+ +F  + E G
Sbjct: 190 LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESG 249

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y   ++ L    R  +   +  ++    +  +VF Y ++++  C   ++  A 
Sbjct: 250 VTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAE 309

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLG------------------------------- 149
            +L EM  +G APD   Y  ++S  C +G                               
Sbjct: 310 SILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGL 369

Query: 150 -QVEEARELAMRFGS----GV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            Q+  A E+A +F      G+    + YN +++ LCK  K+EEA  LL EM  + + P++
Sbjct: 370 SQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDI 429

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           I Y+T+IS     G V  +L I  +M   G  P+I ++  L  G+   G T EA  L N 
Sbjct: 430 INYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNY 489

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P+ V ++ +I GLC  G +D+A +    +EE  C  N   YSA+++G+ +A +
Sbjct: 490 METQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEE-KCLEN---YSAMVNGYCEANH 545

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  +  R+   G      ++  ++  LC      +A  L+E M   N  P  + ++ 
Sbjct: 546 VNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSK 605

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  L   G ++ A  + + +      P++ TY  +++G  R+N++KEA+ ++ +++  G
Sbjct: 606 VIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRG 665

Query: 441 IQLNIVTYNTILHGVCRAGM---------------VVEAFQLLGKMLIEGTKLDAITFNI 485
           I+ +++TY  +L+   +  +               +++   L  +M     K D I + +
Sbjct: 666 IEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTV 725

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  +CK   + +AI L + +   G   PD ++YT+LL G CN G +++A +   +MLN+
Sbjct: 726 LIDKHCKTNNIQDAINLFNEMIDRG-LAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNK 784

Query: 546 GICPNFATWNVL 557
           GI P+  T +VL
Sbjct: 785 GIRPDAHTMSVL 796



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 198/425 (46%), Gaps = 17/425 (4%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            ++ K  G+   E  +  V+++  ++G  E+A+++   ++   + P +  Y  ++     
Sbjct: 382 FKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFL 441

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           + +      IY  MK  G +P++ TYN+L     +N     A  LL  M  +G  PD V+
Sbjct: 442 KGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVT 501

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSG-VSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +  I+  +C  G+V++A+          +  Y+A++NG C+ + + +AF LL  +  +G 
Sbjct: 502 HNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGR 561

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
                ++  ++ +LC  G+ E +L +L  M     NP +  ++ ++      G   +A  
Sbjct: 562 ILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQY 621

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL----- 311
           ++N ++  G  P+V+ Y+ +I+G C    M EA  V   M+     P+V TY+ L     
Sbjct: 622 VFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCS 681

Query: 312 ----------IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
                     +D      N++  S +W+ M      P+V+ YT ++   C+ N    A +
Sbjct: 682 KIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAIN 741

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M      P+TVT+   + G C  G +  A+ L D+M      P+  T + +L  +L
Sbjct: 742 LFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMS-VLHCIL 800

Query: 422 RVNRV 426
           +V +V
Sbjct: 801 KVRKV 805



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 227/504 (45%), Gaps = 48/504 (9%)

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
            N  S+    ++ +K  G   + +TY  +++ LC          +L+E+  K    D   
Sbjct: 70  RNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLD--- 126

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
              IV+    LG    A E    F   V V +ALI         ++AF +L +    G  
Sbjct: 127 -FGIVNLFEALGD-GIANE---SFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFA 181

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P +++ + +++ L +   V+ ++ I  Q+   G NPN +++T  +KG+   G   EA D+
Sbjct: 182 PQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDV 241

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMD------------------------------ 287
           +  M   G  PN  +Y+T I GLC +G  D                              
Sbjct: 242 FRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCS 301

Query: 288 -----EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
                EA S+  +ME+    P+V  Y ALI G+   GNLL A  + + M+S G   N V 
Sbjct: 302 EMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVI 361

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            + +++ L Q  M  +  +  ++        +   +N  +  LC  G+V+ A++LL +MK
Sbjct: 362 LSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMK 421

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
             + +P+I  Y  ++ G     +V +A  +  E++  G + +IVTYN +  G  R G+  
Sbjct: 422 GKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQ 481

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           EA  LL  M  +G K D +T N+II   C  GKV++A    D +      N     Y+++
Sbjct: 482 EALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLEN-----YSAM 536

Query: 523 LWGICNSGGMQEAFIYLQKMLNEG 546
           + G C +  + +AF  L ++  +G
Sbjct: 537 VNGYCEANHVNKAFALLIRLSKQG 560


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/593 (26%), Positives = 273/593 (46%), Gaps = 80/593 (13%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG--MEPNVF 101
           G   +A   F  +   G  P++K  + +++AL    +  +   ++  M RDG  + P+V 
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVH 212

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
           TY  ++KALC+   +D A+ +L E+   G  P  V+Y  ++ ++CK G+VEEA  L  R 
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272

Query: 161 -----------FG---SGVS-------------------------VYNALINGLCKEHKI 181
                      FG   SG++                         +YN +I   C++   
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA  L  EMV +GI   V+TY+ I  +LC  G +E +  IL +M + G   +   F S+
Sbjct: 333 SEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSV 392

Query: 242 LKGYLLG------------------------------------GRTHEASDLWNRMIREG 265
           +  +L G                                    G+  EA+++W +++ +G
Sbjct: 393 VAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG 452

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              NV   + LIHGLC   +M EA  V   M  +    +  TY+ +I G  KA  +  A 
Sbjct: 453 LGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAI 512

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           Q+ + MI  G  P++  +   +   C      +   L+++M  E   P+ VT+ T I G 
Sbjct: 513 QLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGY 572

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C    +  A + L ++ +    PN   YN L+ G  R   + +A  ++  ++  GIQ   
Sbjct: 573 CKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTP 632

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTYN++++ +C AG+V E   +  + +++  +L  I + III  +CK GK++ A+     
Sbjct: 633 VTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKE 692

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +   G   P+ ++YT+L++    SG  +EA     +M++ GI P+  ++N L+
Sbjct: 693 MHSRG-IPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLI 744



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 241/509 (47%), Gaps = 10/509 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    +   V  +LQ+M+  G++ +E ++  +I  + R G   +ALK+F  +   G
Sbjct: 287 LISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKG 346

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK-ALCKNNRVDGA 119
           +K TV  YN I  AL  E        I   M   GM  +   +N ++   L    R+D  
Sbjct: 347 IKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLV 406

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALING 174
            +L+ EM  +   P+    T  +  +CK G+ EEA E     L    G  V+  NALI+G
Sbjct: 407 LRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHG 466

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+ + ++EA  +L  MV+ G++ + ITY+ +I   C    ++ ++ +   M  RG  P+
Sbjct: 467 LCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPD 526

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +F   L  Y   G+  E   L ++M  EG  P++V Y T+I G C    M +A     
Sbjct: 527 LFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLT 586

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++ +N   PN   Y+ALI G+ + GN+  A  I + M  NG  P  V Y  ++  +C   
Sbjct: 587 ELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAG 646

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           +  +  ++  +   ++     + +   I+G C  G++D A+    +M      PN  TY 
Sbjct: 647 LVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYT 706

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+    +    +EA +L  E+   GI  + V+YNT++ G C    + +  +   +M  +
Sbjct: 707 TLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQ 766

Query: 475 GTKLDAITFNI----IIYAYCKQGKVNNA 499
             K D  ++N     I   +C++  V+NA
Sbjct: 767 VLKQDGCSYNAFVDGITTPWCQKEAVSNA 795



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/542 (22%), Positives = 248/542 (45%), Gaps = 41/542 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L    EID    +L +++  G+  +   +  ++++  + G  E+A ++  R+ E  
Sbjct: 217 MIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR 276

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P++  +  ++  L    +F  +  +   M+  G+ PN   YN ++   C+      A 
Sbjct: 277 VRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEAL 336

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------------------------- 154
           KL  EM +KG     V+Y  I  ++CK G++E A                          
Sbjct: 337 KLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH 396

Query: 155 --------------RELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                         RE+  RF     ++  A I  LCK  K EEA  +  +++ +G+  N
Sbjct: 397 LRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN 456

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V T + +I  LC   N++ +  +L  M   G   +  ++  +++G     +  EA  L +
Sbjct: 457 VATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRD 516

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MI+ GF P++  ++  +H  C+ G ++E + +  QM+     P++ TY  +IDG+ KA 
Sbjct: 517 DMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAK 576

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           ++  A++    ++ NG  PN V Y  ++    +N     A  +++ M +    P  VT+N
Sbjct: 577 DMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYN 636

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + +  +C  G V+    +  Q    +    +  Y  ++ G  ++ ++ EA     E+   
Sbjct: 637 SLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSR 696

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  N +TY T++    ++G   EA +L  +M+  G   D++++N +I  +C+   ++  
Sbjct: 697 GIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKM 756

Query: 500 IQ 501
           ++
Sbjct: 757 VE 758



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 236/520 (45%), Gaps = 73/520 (14%)

Query: 102 TYNILLKALCKNNRVDG----AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           T ++L++A C N+   G    A    +E+  +G +P   + + +V ++   GQ++ AR++
Sbjct: 139 TADLLVRA-CLNSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKV 197

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD-RGIDPNVITYSTIISSLCDVGNV 216
              FG                           EM D + + P+V TY+ +I +LC  G +
Sbjct: 198 ---FG---------------------------EMRDGKTVAPDVHTYTAMIKALCRAGEI 227

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +L ++   G  P + ++  L+      GR  EA  L  RM+     P++V +  L
Sbjct: 228 DAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGIL 287

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GL       E  +V  +M+     PN   Y+ +I    + G+   A ++++ M+S G 
Sbjct: 288 ISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGI 347

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK-GLCGCGRVDWAM 395
              VV Y  + K LC+      A  ++++M       +   FN+ +   L G GR+D  +
Sbjct: 348 KQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVL 407

Query: 396 KLLDQMKQYECLPN-----------------------------------ITTYNELLDGL 420
           +L+ +M      PN                                   + T N L+ GL
Sbjct: 408 RLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGL 467

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            + N +KEA +++  +   G++L+ +TYN ++ G C+A  + EA QL   M+  G K D 
Sbjct: 468 CQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDL 527

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            TFNI ++ YC  GKV   + LLD+++  G   PDI++Y +++ G C +  M +A  YL 
Sbjct: 528 FTFNIFLHTYCNLGKVEEILHLLDQMKSEG-LKPDIVTYGTIIDGYCKAKDMHKANEYLT 586

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +++  G+ PN   +N L+     N      + ILD +  N
Sbjct: 587 ELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYN 626


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 275/579 (47%), Gaps = 14/579 (2%)

Query: 2   IEKLGEKCEIDGVQYLLQQMK-VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +E L    ++D  + +  +M+    V+ +E  + ++I +  + G  +   +M   +   G
Sbjct: 192 LEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAG 251

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+PTV  YN ++DAL    R      +   M++ GM P+V T+ IL+  L +  R     
Sbjct: 252 LQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVG 311

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
            +L EM   G +P+ V Y  ++   C+ G   +A     E+ ++     +V YN +   L
Sbjct: 312 IVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKAL 371

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD-VGNVETSLGILGQMFVRGCNPN 234
           CKE ++E A  +L +M+  G+  +   ++T+++ L      +E+ + I  +M  RG  PN
Sbjct: 372 CKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPN 431

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
               T+ ++    GG+  EA  +W + + +G   N+   + LIHGLC    M EA  V  
Sbjct: 432 DPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQ 491

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M       +  TY+ +I G  K   +  A ++   M   G  P++  +  ++   C   
Sbjct: 492 TMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 551

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +   L+++M  E   P+ V++ T I G C    +  A + L ++      PN+  YN
Sbjct: 552 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 611

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G  R   +  A + V  ++  GIQ   VTY ++++ +C AG+V EA  +  +    
Sbjct: 612 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 671

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
              L  I + I+I  YCK GK+  A+   + +R  G  +P+ ++YT+L++    SG  +E
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRG-ISPNKLTYTTLMYAYSKSGNSEE 730

Query: 535 AFIYLQKMLNEGICPNFATWNVL------VRSLFSNLGH 567
           A     +M+  G+ P+  T+  L      V SL  ++GH
Sbjct: 731 ASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGH 769



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/552 (25%), Positives = 256/552 (46%), Gaps = 41/552 (7%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD-GMEPNVFTYNIL 106
           +A   F  +   G  P++K  N  L+AL+   +      ++  M+    +  N ++Y  +
Sbjct: 168 RAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAM 227

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-- 164
           +KALCK  +VD  +++L E+   G  P  V+Y  ++ ++CK G+VEEA  L  R   G  
Sbjct: 228 IKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM 287

Query: 165 ---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  +  LINGL +  +  E   +L EM   G+ PN + Y+ +I   C  G+   +L 
Sbjct: 288 TPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALR 347

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M ++   P   ++  + K     G    A  +   M+  G   +   ++T++  L 
Sbjct: 348 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 407

Query: 282 SNGS-MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                ++  VS++ +M      PN    +A +    K G    A  IW + ++ G   N+
Sbjct: 408 QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNL 467

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
                ++  LC+     +A  +I+ M  +    +++T+N  I+G C   +++ A+KL   
Sbjct: 468 ATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 527

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +    P++ T+N LL     + +++E F L+ +++  G+Q +IV+Y TI+ G C+A  
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKD 587

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG---------- 510
           + +A + L +++  G K +   +N +I  Y + G ++ AI  ++ ++  G          
Sbjct: 588 IRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGS 647

Query: 511 ----------------------EWNPD--IISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
                                 E N D  +I YT ++ G C  G M EA  Y ++M + G
Sbjct: 648 LMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRG 707

Query: 547 ICPNFATWNVLV 558
           I PN  T+  L+
Sbjct: 708 ISPNKLTYTTLM 719



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 250/529 (47%), Gaps = 7/529 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +  ++D    +L ++   G+  +   +  ++++  + G  E+A ++  R+ + G
Sbjct: 227 MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 286

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P+V  +  +++ L    RF  +  +   M++ G+ PN   YN L+   C+      A 
Sbjct: 287 MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQAL 346

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVSVYNALING----- 174
           +L  EM  K   P AV+Y  I  ++CK G++E A R L      G++V+  L N      
Sbjct: 347 RLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWL 406

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L +  ++E    +  EMV RG+ PN    +  +  LC  G  + ++GI  +   +G   N
Sbjct: 407 LQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVN 466

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +  +L+ G   G    EA+ +   M+ +G   + + Y+ +I G C +  M+EA+ +  
Sbjct: 467 LATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHG 526

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M      P++ T++ L+  +   G +     + ++M + G  P++V+Y  ++   C+  
Sbjct: 527 DMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAK 586

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A   + ++      PN   +N  I G    G +  A+  ++ MK     P   TY 
Sbjct: 587 DIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYG 646

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+  +     V+EA  + ++  +  + L ++ Y  ++ G C+ G +VEA     +M   
Sbjct: 647 SLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSR 706

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           G   + +T+  ++YAY K G    A +L D + G G   PD I+Y +L+
Sbjct: 707 GISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVI-PDNITYGTLI 754



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 217/494 (43%), Gaps = 47/494 (9%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           E+ GE      V  +LQ+M+  GVS +E ++  +I  + R G   QAL++F  +    +K
Sbjct: 305 ERFGE------VGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMK 358

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALC-KNNRVDGAYK 121
           PT   YN I  AL  E        I  +M   GM  +   +N ++  L  +  R++    
Sbjct: 359 PTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVS 418

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLC 176
           +  EM  +G  P+    T  +  +CK G+ +EA     + L    G  ++  NALI+GLC
Sbjct: 419 ITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLC 478

Query: 177 -----------------------------------KEHKIEEAFWLLCEMVDRGIDPNVI 201
                                              K+ K+EEA  L  +M  RG  P++ 
Sbjct: 479 EGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLF 538

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T++T++ + C++G +E +  +L QM   G  P+I S+ +++ G+       +A +    +
Sbjct: 539 TFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTEL 598

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +  G  PNV  Y+ LI G   NG +  A+     M+ N   P   TY +L+     AG +
Sbjct: 599 MDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLV 658

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  I+++   N     V+ YT M++  C+     +A +  E+M      PN +T+ T 
Sbjct: 659 EEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTL 718

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +      G  + A KL D+M     +P+  TY  L+     VN + +      E+    +
Sbjct: 719 MYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGAL 778

Query: 442 QLNIVTYNTILHGV 455
             +   YN + +G+
Sbjct: 779 TKDDRMYNILSNGI 792



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 150/325 (46%), Gaps = 39/325 (12%)

Query: 276 LIHGLCSN---GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           LIH   ++   GS+  A      +     PP++ T +A ++   +AG L  A ++++ M 
Sbjct: 153 LIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMR 212

Query: 333 -SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            S   + N  +YT M+K LC+         ++ ++      P  VT+N  +  LC  GRV
Sbjct: 213 ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 272

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + A +L  +M+Q    P++ T+  L++GL R  R  E   ++ E+E+ G+  N V YN +
Sbjct: 273 EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 332

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG- 510
           +   CR G   +A +L  +M+++  K  A+T+N+I  A CK+G++  A ++L+ +   G 
Sbjct: 333 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 392

Query: 511 -----------EW-----------------------NPDIISYTSLLWGICNSGGMQEAF 536
                       W                        P+    T+ +  +C  G  QEA 
Sbjct: 393 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 452

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
               K LN+G+  N AT N L+  L
Sbjct: 453 GIWFKTLNKGLGVNLATSNALIHGL 477



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 127/264 (48%), Gaps = 2/264 (0%)

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVT 377
           G+L  A+  +  + S G  P++      ++ L +      A  + ++M    N   N  +
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +   IK LC  G+VD   ++L ++ +    P + TYN L+D L +  RV+EAF L   +E
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G+  ++VT+  +++G+ R     E   +L +M   G   + + +N +I  +C++G  +
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A++L D +    +  P  ++Y  +   +C  G M+ A   L+ ML+ G+  +   +N +
Sbjct: 344 QALRLFDEMVLK-KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402

Query: 558 VRSLFSNLGHLGPVYILDDIMANK 581
           V  L      L  V  + + M  +
Sbjct: 403 VAWLLQRTRRLESVVSITNEMVTR 426


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 262/559 (46%), Gaps = 7/559 (1%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYN 69
             D V   LQ M + G + +     +++ +Y   G+  +A +M  R+RE +G  P V   N
Sbjct: 888  FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L  L+ + R+     +Y  M       + ++  +L++ LC   RV+   KL+      
Sbjct: 948  RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1007

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
            GC P  V Y  ++   C+ G +     L        F   +  Y +LIN L K+  +E+ 
Sbjct: 1008 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKI 1067

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L  EM  RG  PNV  Y+++I +LC+  +   ++ IL QMF  GC+P+I +F +L+ G
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITG 1127

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                G   +A       IR    PN ++Y+ LIHG C  G +  A  +  +M      P+
Sbjct: 1128 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1187

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            V T+ ALI G   AG +  A  +  +M      P+V  Y  ++  LC+  M   A +++E
Sbjct: 1188 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1247

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +M  +N  P+   + T I G      +  A K+ + M+     P+I + N ++ G  +  
Sbjct: 1248 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFG 1307

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             + EA   ++ + K G   +  TY T++ G  + G +  A + L  M+    K + +T++
Sbjct: 1308 MMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1367

Query: 485  IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
             +I  YCK G  ++A  L   ++     +P++++YT L+  +     +  A +Y + ML 
Sbjct: 1368 SLINGYCKTGDTDSAEGLFANMQAEA-LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1426

Query: 545  EGICPNFATWNVLVRSLFS 563
                PN  T + LV  L S
Sbjct: 1427 NHCSPNDVTLHYLVNGLTS 1445



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 235/503 (46%), Gaps = 22/503 (4%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            LL +M+  G   +   + S+IN   + G  E+   +F  +R+ G  P V+IYN ++DAL 
Sbjct: 1035 LLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALC 1094

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +    I   M   G +P++ T+N L+  LC    V  A   L E   +   P+ +
Sbjct: 1095 NCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQL 1154

Query: 137  SYTTIVSSICKLGQVEEARELAMR-FGSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
            SYT ++   C  G++  A +L +   G G    V  + ALI+GL    K+ EA  +  +M
Sbjct: 1155 SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 1214

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +R + P+V  Y+ +IS LC    +  +  IL +M  +   P+   + +L+ G++     
Sbjct: 1215 TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1274

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             +A  ++  M  +G  P++V+ + +I G C  G M EA+     M +  C P+  TY+ +
Sbjct: 1275 GDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 1334

Query: 312  IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            I G+AK GNL GA +    MI   C PNVV Y+ ++   C+      A  L   M  E  
Sbjct: 1335 ISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEAL 1394

Query: 372  PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR-----VNRV 426
             PN VT+   I  L    +V  A    + M    C PN  T + L++GL       +N +
Sbjct: 1395 SPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSI 1454

Query: 427  ---------KEAFELVTE--IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
                     K+A  +V +  +   G   N   YN I+  +CR  M+ EA     +M  +G
Sbjct: 1455 CCNTSEVHGKDALLVVFKKLVFDIGDPRN-SAYNAIIFSLCRHNMLREALDFKNRMAKKG 1513

Query: 476  TKLDAITFNIIIYAYCKQGKVNN 498
               + ITF  ++Y +C  GK  N
Sbjct: 1514 YVPNPITFLSLLYGFCSVGKSVN 1536



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 244/533 (45%), Gaps = 22/533 (4%)

Query: 41   RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
            RRV   E+ LK+       G  P V  YN ++D             +   M+ +G  P +
Sbjct: 992  RRV---EEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTL 1048

Query: 101  FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAM 159
             TY  L+  L K   ++    L +EM  +G +P+   Y +++ ++C      +A   L  
Sbjct: 1049 VTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQ 1108

Query: 160  RFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
             F SG    +  +N LI GLC E  + +A   L E + R ++PN ++Y+ +I   C  G 
Sbjct: 1109 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1168

Query: 216  VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
            +  +  +L +M  RG  P++ +F +L+ G ++ G+  EA  +  +M      P+V  Y+ 
Sbjct: 1169 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1228

Query: 276  LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            LI GLC    +  A ++  +M E +  P+   Y+ LIDGF ++ NL  A +I+  M   G
Sbjct: 1229 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 1288

Query: 336  CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
              P++V+   M+K  CQ  M  +A   +  M    C P+  T+ T I G    G ++ A+
Sbjct: 1289 VCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1348

Query: 396  KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            + L  M + +C PN+ TY+ L++G  +      A  L   ++   +  N+VTY  ++  +
Sbjct: 1349 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSL 1408

Query: 456  CRAGMVVEAFQLLGKMLIEGTKLDAITFNIII--YAYCKQGKVNNAIQLLDRIRGGGEW- 512
             +   V+ A      ML+     + +T + ++     C    +N+       + G     
Sbjct: 1409 FKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALL 1468

Query: 513  -----------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
                       +P   +Y ++++ +C    ++EA  +  +M  +G  PN  T+
Sbjct: 1469 VVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 1521



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 205/496 (41%), Gaps = 91/496 (18%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  LG+K +++ +  L  +M+  G S +  ++ SVI++      A QA+ +  ++   G
Sbjct: 1054 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASG 1113

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P +  +N ++  L  E              R  + PN  +Y  L+   C    +  A 
Sbjct: 1114 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1173

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RE--LAMRFGSGVSVYNALINGL 175
             LLVEM  +G  PD V++  ++  +   G+V EA   RE     +    V++YN LI+GL
Sbjct: 1174 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL------------------------- 210
            CK+  +  A  +L EM+++ + P+   Y+T+I                            
Sbjct: 1234 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDI 1293

Query: 211  ----------CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
                      C  G +  ++  +  M   GC P+  ++T+++ GY   G  + A      
Sbjct: 1294 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1353

Query: 261  MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
            MI+    PNVV YS+LI+G C  G  D A  +   M+  +  PNV TY+ LI    K   
Sbjct: 1354 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 1413

Query: 321  LLGASQIWNRMISNGCSPNVV--------------------------------------- 341
            +L A   +  M+ N CSPN V                                       
Sbjct: 1414 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 1473

Query: 342  -----------AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
                       AY  ++  LC++NM  +A     +MA +   PN +TF + + G C  G+
Sbjct: 1474 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533

Query: 391  -VDWAMKLLDQMKQYE 405
             V+W   L ++ +Q E
Sbjct: 1534 SVNWRTILPNEFQQEE 1549



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 178/415 (42%), Gaps = 41/415 (9%)

Query: 197  DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            DP  + +ST++  L      +     L  M + G  P      +L+  Y   G   +A++
Sbjct: 869  DPTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATE 928

Query: 257  LWNRMIRE--GFLPNVVA---------------------------------YST--LIHG 279
            +  R +RE  G LP V                                   YST  L+ G
Sbjct: 929  MCER-VREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRG 987

Query: 280  LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            LC    ++E + +        C P+V  Y+ LIDG+ + G++     +   M +NG  P 
Sbjct: 988  LCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPT 1047

Query: 340  VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            +V Y  ++  L +     +  SL  +M      PN   +N+ I  LC C     AM +L 
Sbjct: 1048 LVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILK 1107

Query: 400  QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            QM    C P+I T+N L+ GL     V++A   + E  +  +  N ++Y  ++HG C  G
Sbjct: 1108 QMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRG 1167

Query: 460  MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
             ++ A  LL +M+  G   D +TF  +I+     GKV+ A+ + +++     + PD+  Y
Sbjct: 1168 ELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF-PDVNIY 1226

Query: 520  TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF--SNLGHLGPVY 572
              L+ G+C    +  A   L++ML + + P+   +  L+       NLG    ++
Sbjct: 1227 NVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1281


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/468 (30%), Positives = 243/468 (51%), Gaps = 21/468 (4%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           NV TY  L+   C++ R+  A +L+  M     APD  +Y T++  +C   Q EEA EL 
Sbjct: 186 NVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWEEAEELM 242

Query: 159 MRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                         +   I   C+   ++ A  LL +M   G  P+V+ YST+++   + 
Sbjct: 243 REMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEH 302

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V+ +L +L  M    C PN   + + LKG  + GR  E  +L   M+R+   PN   +
Sbjct: 303 GRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATF 359

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           STLI+ LC N   + A+ V  QM++    P+V +Y+ +I  F++      A ++ N M+ 
Sbjct: 360 STLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML- 418

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             C P+ +++  ++K LC+   ++ A  L+ KM  E+C  N +TFN  I  LC  G+V  
Sbjct: 419 --CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKD 476

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+++ + M +Y C P+I TY+ L++G       K AF+L   +     + +I +YN  L 
Sbjct: 477 AIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLK 533

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C A    +A +L+  M+ +    + +TFNI+I + C++G VN AI++ +++   G   
Sbjct: 534 GLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYG-IT 592

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PDI +Y +L+ G    G + +A  +L  M  E   P+  ++N +++ L
Sbjct: 593 PDIFTYNALINGYSEQGCLDDALKFLSTMPCE---PDTISYNSILKGL 637



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 142/486 (29%), Positives = 241/486 (49%), Gaps = 43/486 (8%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+ Y R G    AL++   I    + P    YN +L  L    ++     +   M
Sbjct: 189 TYTALIDGYCRSGRLTDALRL---IASMPVAPDTYTYNTVLKGLCFAKQWEEAEELMREM 245

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R+   PN  T+   ++A C+N  +D A +LL +M   GC PD V Y+T+V+   + G+V
Sbjct: 246 IRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRV 305

Query: 152 EEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           ++A +L   M        YNA + GLC   + +E   L+ EMV +   PN  T+ST+I+S
Sbjct: 306 DDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINS 365

Query: 210 LCDVGNVETSLGILGQMFVRG--------------------------------CNPNIHS 237
           LC     E ++ +L QM   G                                C P+  S
Sbjct: 366 LCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTIS 425

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F ++LK      R ++A++L  +M++E    N + ++ LI  LC NG + +A+ +   M 
Sbjct: 426 FNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMP 485

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +  C P++ TYS+LI+GF++ G    A  ++  M    C  ++ +Y   +K LC    + 
Sbjct: 486 KYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAARWD 542

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  LI  M  ++C PN VTFN  I  LC  G V+ A+++ +QM +Y   P+I TYN L+
Sbjct: 543 DAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALI 602

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G      + +A + ++ +     + + ++YN+IL G+CRA    +A +L+ +ML +   
Sbjct: 603 NGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCT 659

Query: 478 LDAITF 483
            + +TF
Sbjct: 660 PNEVTF 665



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 178/367 (48%), Gaps = 12/367 (3%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P VIT + +I  LC    +  +  +L  +   G    + S  +L+ GY   G   +A  +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAADAV-SHNTLVAGYCRDGSLWDAERV 175

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
                R     NVV Y+ LI G C +G + +A+ +   M      P+  TY+ ++ G   
Sbjct: 176 LE-AARASGAANVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCF 231

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A     A ++   MI N C PN V +   ++  CQN +  +A  L+E+M    C P+ V 
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++T + G    GRVD A+KLL  M    C PN   YN  L GL    R  E  EL+ E+ 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +     N  T++T+++ +C+  +   A ++L +M   G   D +++N II  + +Q   +
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACAD 408

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A++LL+ +       PD IS+ ++L  +C +    +A   + KML E    N  T+N+L
Sbjct: 409 DALKLLNSMLC----KPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNIL 464

Query: 558 VRSLFSN 564
           + SL  N
Sbjct: 465 IDSLCQN 471



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 40/223 (17%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK----------------------------- 402
           PP  +T N  IK LC   R+  A ++L+ +K                             
Sbjct: 116 PPAVITCNILIKKLCARRRLADAERVLEALKTSGAADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 403 ----QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
               +     N+ TY  L+DG  R  R+ +A  L+  +    +  +  TYNT+L G+C A
Sbjct: 176 LEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFA 232

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
               EA +L+ +M+      + +TF   I A+C+ G ++ A++LL+++   G   PD++ 
Sbjct: 233 KQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG-CMPDVVI 291

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y++L+ G    G + +A   L  ML     PN   +N  ++ L
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGL 331


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 258/557 (46%), Gaps = 79/557 (14%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L   +  G+  S   F +++ ++   G    A++ F R+ EF  +PT             
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTA------------ 172

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                                  F YN +LKAL  +  +  A  L   M   GCAP+  +
Sbjct: 173 -----------------------FVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           Y                              N L++GLCK+    +A  +  EM+DRGI 
Sbjct: 210 Y------------------------------NVLMDGLCKQGMAGDALKMFDEMLDRGIM 239

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           PNV  Y+ ++SSLC+ G ++ ++ +LG M  +GC P+  ++ + L G    GR +EA   
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQR 299

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              +   GF   +  YS LI GL      DE       M E +  P+V  Y+ +I G A+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAE 359

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           AG +  A    + M   G  P+   Y  ++KVLC +    +AH+L  +M   N   ++ T
Sbjct: 360 AGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
               I GLC  G VD AM++ D+M ++ C P + TYN L+DG  R  R++EA  L  ++E
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479

Query: 438 ---------KCGIQLNIV----TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
                    +  +  N V    +   ++H +C++G V++A++LL  ++  G   D +T+N
Sbjct: 480 MGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I   CK   ++ A++L   ++  G  +PD I+Y +L+ G+  +    +A +  Q +L 
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKG-ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598

Query: 545 EGICPNFATWNVLVRSL 561
            G  P+ + +N ++RSL
Sbjct: 599 SGSSPSLSIYNSMMRSL 615



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 252/550 (45%), Gaps = 55/550 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G + +   +  +++   + G+A  ALKMF  + + G+ P VKIY  +L +L 
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +  +MK  G  P+  TYN  L  LCK  RV+ A++ LV + + G      
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG------ 307

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
                                   F  G+  Y+ LI+GL +  + +E F     M++R I
Sbjct: 308 ------------------------FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNI 343

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+V+ Y+ +I    + G +E +L  L  M  +G  P+   + ++LK     G    A  
Sbjct: 344 SPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L + M++   + +    + +I GLC  G +DEA+ +  +M E+ C P V TY+ALIDGF 
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 317 KAGNLLGASQIWNRMISNGCSPNVV--------------AYTCMVKVLCQNNMFHQAHSL 362
           + G L  A  ++++M   G +P++               +   +V  +CQ+    +A+ L
Sbjct: 464 REGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +  +      P+ VT+NT I GLC    +D A++L  +++     P+  TY  L+DGLLR
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            +R  +A  L   I + G   ++  YN+++  +CR   + +A  L    L +      + 
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF-PVE 641

Query: 483 FNIIIYAY--CKQGKVNNAIQLL---DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
             ++  A+   + G +++ ++ L   D+  G    NP    YT  L G+C      +A  
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNP----YTIWLIGLCQVRRTDDALR 697

Query: 538 YLQKMLNEGI 547
               +   GI
Sbjct: 698 IFHTLQEFGI 707



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 208/469 (44%), Gaps = 31/469 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L    +ID    LL  MK +G    E  + + ++   +VG   +A +    +++ G
Sbjct: 248 LLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG 307

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +K Y+ ++D L    RF      Y  M    + P+V  Y I+++   +  R++ A 
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LINGL 175
             L  M  KG  PD   Y T++  +C  G +E A  L         V ++     +I GL
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   ++EA  +  EM + G DP V+TY+ +I      G +E +  +  +M + G NP++
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSL 486

Query: 236 --------------HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
                          S   L+      G+  +A  L   +I  G +P+VV Y+TLI+GLC
Sbjct: 487 FLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
              ++D AV +  +++     P+  TY  LIDG  +A     A  ++  ++ +G SP++ 
Sbjct: 547 KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC------GRVDWAM 395
            Y  M++ LC+     QA +L     + +  P    F    + L         G +D  +
Sbjct: 607 IYNSMMRSLCRMKKLSQAINL-----WLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGV 661

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           + L ++ Q     +   Y   L GL +V R  +A  +   +++ GI + 
Sbjct: 662 RELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDIT 710



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 40/384 (10%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R +  + ++    +SS  D    E     L      G   +  +F +L+  +   GR  +
Sbjct: 100 RPLHAHAVSLLLRLSSHAD----EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHAD 155

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A   ++RM      P    Y+T++  L  +G +  A+++  +M    C PN  TY+ L+D
Sbjct: 156 AVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMD 215

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G    A ++++ M+  G  PNV  YT ++  LC      +A  L+  M  + C P
Sbjct: 216 GLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP 275

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQ---------MKQYECL----------------- 407
           + VT+N F+ GLC  GRV+ A + L           +K Y CL                 
Sbjct: 276 DEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYY 335

Query: 408 ---------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
                    P++  Y  ++ G     R+++A   +  ++K G   +   YNT+L  +C  
Sbjct: 336 KTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G +  A  L  +ML     LD+ T  I+I   CK+G V+ A+Q+ D + G    +P +++
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEHGCDPTVMT 454

Query: 519 YTSLLWGICNSGGMQEAFIYLQKM 542
           Y +L+ G    G ++EA +   KM
Sbjct: 455 YNALIDGFYREGRLEEARMLFHKM 478



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 1/191 (0%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           P ++  F   +      GR   A++   +M +++  P    YN +L  L+    +  A  
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +   G   N  TYN ++ G+C+ GM  +A ++  +ML  G   +   + +++ + C
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             GK++ A+QLL  ++  G   PD ++Y + L G+C  G + EAF  L  + + G     
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCL-PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 552 ATWNVLVRSLF 562
             ++ L+  LF
Sbjct: 313 KGYSCLIDGLF 323



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/304 (19%), Positives = 104/304 (34%), Gaps = 124/304 (40%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK----------- 92
           GL ++A+++F  + E G  PTV  YN ++D    E R      ++  M+           
Sbjct: 431 GLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRL 490

Query: 93  -------RD------------------------------GMEPNVFTYNILLKALCKNNR 115
                  RD                              G+ P+V TYN L+  LCK   
Sbjct: 491 TLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARN 550

Query: 116 VDGAYKLLVEMGNKGCAPDAVS-----------------------------------YTT 140
           +DGA +L  E+  KG +PD ++                                   Y +
Sbjct: 551 LDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNS 610

Query: 141 IVSSICKLGQVEEA-------------------------------------REL---AMR 160
           ++ S+C++ ++ +A                                     REL      
Sbjct: 611 MMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQE 670

Query: 161 FGSGVS-VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           +GS  S  Y   + GLC+  + ++A  +   + + GID      + +I+ LC   N+  +
Sbjct: 671 YGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAA 730

Query: 220 LGIL 223
           + I+
Sbjct: 731 VDIM 734


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 262/559 (46%), Gaps = 7/559 (1%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYN 69
             D V   LQ M + G + +     +++ +Y   G+  +A KM  R+RE +G  P V   N
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L  L+ + R+     +Y  M       + ++  +L++ LC   RV+   KL+      
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1176

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
            GC P  V Y  ++   C+ G +        E+  + F   +  Y +LIN L K+  +E+ 
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L  EM  RG  PNV  Y+++I +LC   +   ++ IL QMF  GC+P+I +F +L+ G
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                G   +A       IR    PN ++Y+ LIHG C  G +  A  +  +M      P+
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            V T+ ALI G   AG +  A  +  +M      P+V  Y  ++  LC+  M   A +++E
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +M  +N  P+   + T I G      +  A K+ + M+     P+I + N ++ G  +  
Sbjct: 1417 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFG 1476

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             + EA   ++ + K G   +  TY T++ G  + G +  A + L  M+    K + +T++
Sbjct: 1477 MMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYS 1536

Query: 485  IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
             +I  YCK G  + A  L   ++     +P++++YT L+  +     +  A +Y + ML 
Sbjct: 1537 SLINGYCKTGDTDFAEGLFANMQAEA-LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLL 1595

Query: 545  EGICPNFATWNVLVRSLFS 563
                PN  T + LV  L S
Sbjct: 1596 NHCSPNDVTLHYLVNGLTS 1614



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 236/503 (46%), Gaps = 22/503 (4%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            LL +M+ +G   +   + S+IN   + G  E+   +F  +R+ G  P V+IYN ++DAL 
Sbjct: 1204 LLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALC 1263

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 +    I   M   G +P++ T+N L+  LC    V  A   L E   +   P+ +
Sbjct: 1264 KCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQL 1323

Query: 137  SYTTIVSSICKLGQVEEARELAMR-FGSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
            SYT ++   C  G++  A +L +   G G    V  + ALI+GL    K+ EA  +  +M
Sbjct: 1324 SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 1383

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +R + P+V  Y+ +IS LC    +  +  IL +M  +   P+   + +L+ G++     
Sbjct: 1384 TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1443

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             +A  ++  M  +G  P++V+ + +I G C  G M EA+     M +  C P+  TY+ +
Sbjct: 1444 GDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 1503

Query: 312  IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
            I G+AK GNL GA +    MI   C PNVV Y+ ++   C+      A  L   M  E  
Sbjct: 1504 ISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEAL 1563

Query: 372  PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR-----VNRV 426
             PN VT+   I  L    +V  A    + M    C PN  T + L++GL       +N +
Sbjct: 1564 SPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSI 1623

Query: 427  ---------KEAFELVTE--IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
                     K+A  +V +  +   G   N   YN I+  +CR  M+ EA     +M  +G
Sbjct: 1624 CCNTSEVHGKDALLVVFKKLVFDIGDPRN-SAYNAIIFSLCRHNMLREALDFKNRMAKKG 1682

Query: 476  TKLDAITFNIIIYAYCKQGKVNN 498
               + ITF  ++Y +C  GK  N
Sbjct: 1683 YVPNPITFLSLLYGFCSVGKSVN 1705



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/538 (25%), Positives = 242/538 (44%), Gaps = 45/538 (8%)

Query: 32   VFISV-INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
            VF +V I+ Y R G   + L +   +   G  PT+  Y  +++ L  +     I  ++  
Sbjct: 1183 VFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLE 1242

Query: 91   MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            M++ G  PNV  YN ++ ALCK      A  +L +M   GC PD +++            
Sbjct: 1243 MRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITF------------ 1290

Query: 151  VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                              N LI GLC E  + +A   L E + R ++PN ++Y+ +I   
Sbjct: 1291 ------------------NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1332

Query: 211  CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
            C  G +  +  +L +M  RG  P++ +F +L+ G ++ G+  EA  +  +M      P+V
Sbjct: 1333 CMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV 1392

Query: 271  VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
              Y+ LI GLC    +  A ++  +M E +  P+   Y+ LIDGF ++ NL  A +I+  
Sbjct: 1393 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 1452

Query: 331  MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
            M   G  P++V+   M+K  CQ  M  +A   +  M    C P+  T+ T I G    G 
Sbjct: 1453 MEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1512

Query: 391  VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            ++ A++ L  M + +C PN+ TY+ L++G  +      A  L   ++   +  N+VTY  
Sbjct: 1513 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTI 1572

Query: 451  ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII--YAYCKQGKVNNAIQLLDRIRG 508
            ++  + +   V+ A      ML+     + +T + ++     C    +N+       + G
Sbjct: 1573 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1632

Query: 509  GGEW------------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
                            +P   +Y ++++ +C    ++EA  +  +M  +G  PN  T+
Sbjct: 1633 KDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITF 1690



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 206/496 (41%), Gaps = 91/496 (18%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I  LG+K +++ +  L  +M+  G S +  ++ SVI++  +   A QA+ +  ++   G
Sbjct: 1223 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASG 1282

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P +  +N ++  L  E              R  + PN  +Y  L+   C    +  A 
Sbjct: 1283 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1342

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RE--LAMRFGSGVSVYNALINGL 175
             LLVEM  +G  PD V++  ++  +   G+V EA   RE     +    V++YN LI+GL
Sbjct: 1343 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1402

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL------------------------- 210
            CK+  +  A  +L EM+++ + P+   Y+T+I                            
Sbjct: 1403 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDI 1462

Query: 211  ----------CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
                      C  G +  ++  +  M   GC P+  ++T+++ GY   G  + A      
Sbjct: 1463 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1522

Query: 261  MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
            MI+    PNVV YS+LI+G C  G  D A  +   M+  +  PNV TY+ LI    K   
Sbjct: 1523 MIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 1582

Query: 321  LLGASQIWNRMISNGCSPNVV--------------------------------------- 341
            +L A   +  M+ N CSPN V                                       
Sbjct: 1583 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 1642

Query: 342  -----------AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
                       AY  ++  LC++NM  +A     +MA +   PN +TF + + G C  G+
Sbjct: 1643 LVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702

Query: 391  -VDWAMKLLDQMKQYE 405
             V+W   L ++ +Q E
Sbjct: 1703 SVNWRTILPNEFQQEE 1718


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 258/557 (46%), Gaps = 79/557 (14%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L   +  G+  S   F +++ ++   G    A++ F R+ EF  +PT             
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTA------------ 172

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                                  F YN +LKAL  +  +  A  L   M   GCAP+  +
Sbjct: 173 -----------------------FVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           Y                              N L++GLCK+    +A  +  EM+DRGI 
Sbjct: 210 Y------------------------------NVLMDGLCKQGMAGDALKMFDEMLDRGIM 239

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           PNV  Y+ ++SSLC+ G ++ ++ +LG M  +GC P+  ++ + L G    GR +EA   
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQR 299

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              +   GF   +  YS LI GL      DE       M E +  P+V  Y+ +I G A+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAE 359

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           AG +  A    + M   G  P+   Y  ++KVLC +    +AH+L  +M   N   ++ T
Sbjct: 360 AGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
               I GLC  G VD AM++ D+M ++ C P + TYN L+DG  R  R++EA  L  ++E
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479

Query: 438 ---------KCGIQLNIV----TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
                    +  +  N V    +   ++H +C++G V++A++LL  ++  G   D +T+N
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I   CK   ++ A++L   ++  G  +PD I+Y +L+ G+  +    +A +  Q +L 
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKG-ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598

Query: 545 EGICPNFATWNVLVRSL 561
            G  P+ + +N ++RSL
Sbjct: 599 SGSSPSLSIYNSMMRSL 615



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 221/465 (47%), Gaps = 45/465 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G + +   +  +++   + G+A  ALKMF  + + G+ P VKIY  +L +L 
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +  +MK  G  P+  TYN  L  LCK  RV+ A++ LV + + G      
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG------ 307

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
                                   F  G+  Y+ LI+GL +  + +E F     M++R I
Sbjct: 308 ------------------------FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNI 343

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+V+ Y+ +I    + G +E +L  L  M  +G  P+   + ++LK     G    A  
Sbjct: 344 SPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L + M++   + +    + +I GLC  G +DEA+ +  +M E+ C P V TY+ALIDGF 
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 317 KAGNLLGASQIWNRMISNGCSPNVV--------------AYTCMVKVLCQNNMFHQAHSL 362
           + G L  A  ++++M   G +P++               +   +V  +CQ+    +A+ L
Sbjct: 464 REGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +  +      P+ VT+NT I GLC    +D A++L  +++     P+  TY  L+DGLLR
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            +R  +A  L   I + G   ++  YN+++  +CR   + +A  L
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 208/469 (44%), Gaps = 31/469 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L    +ID    LL  MK +G    E  + + ++   +VG   +A +    +++ G
Sbjct: 248 LLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG 307

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +K Y+ ++D L    RF      Y  M    + P+V  Y I+++   +  R++ A 
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LINGL 175
             L  M  KG  PD   Y T++  +C  G +E A  L         V ++     +I GL
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   ++EA  +  EM + G DP V+TY+ +I      G +E +  +  +M + G NP++
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSL 486

Query: 236 --------------HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
                          S   L+      G+  +A  L   +I  G +P+VV Y+TLI+GLC
Sbjct: 487 FLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
              ++D AV +  +++     P+  TY  LIDG  +A     A  ++  ++ +G SP++ 
Sbjct: 547 KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC------GRVDWAM 395
            Y  M++ LC+     QA +L     + +  P    F    + L         G +D  +
Sbjct: 607 IYNSMMRSLCRMKKLSQAINL-----WLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGV 661

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           + L ++ Q     +   Y   L GL +V R  +A  +   +++ GI + 
Sbjct: 662 RELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDIT 710



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 40/384 (10%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R +  + ++    +SS  D    E     L      G   +  +F +L+  +   GR  +
Sbjct: 100 RPLHAHAVSLLLRLSSHAD----EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHAD 155

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A   ++RM      P    Y+T++  L  +G +  A+++  +M    C PN  TY+ L+D
Sbjct: 156 AVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMD 215

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G    A ++++ M+  G  PNV  YT ++  LC      +A  L+  M  + C P
Sbjct: 216 GLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP 275

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQ---------MKQYECL----------------- 407
           + VT+N F+ GLC  GRV+ A + L           +K Y CL                 
Sbjct: 276 DEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYY 335

Query: 408 ---------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
                    P++  Y  ++ G     R+++A   +  ++K G   +   YNT+L  +C  
Sbjct: 336 KTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G +  A  L  +ML     LD+ T  I+I   CK+G V+ A+Q+ D + G    +P +++
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEHGCDPTVMT 454

Query: 519 YTSLLWGICNSGGMQEAFIYLQKM 542
           Y +L+ G    G ++EA +   KM
Sbjct: 455 YNALIDGFYREGRLEEARMLFHKM 478



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 1/191 (0%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           P ++  F   +      GR   A++   +M +++  P    YN +L  L+    +  A  
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +   G   N  TYN ++ G+C+ GM  +A ++  +ML  G   +   + +++ + C
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             GK++ A+QLL  ++  G   PD ++Y + L G+C  G + EAF  L  + + G     
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCL-PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 552 ATWNVLVRSLF 562
             ++ L+  LF
Sbjct: 313 KGYSCLIDGLF 323



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/237 (17%), Positives = 92/237 (38%), Gaps = 41/237 (17%)

Query: 28  CSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
           C       +++   + G   +A K+   I + G+ P V  YN +++ L           +
Sbjct: 498 CDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRL 557

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           +  ++  G+ P+  TY  L+  L + +R + A  L   +   G +P    Y +++ S+C+
Sbjct: 558 FKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCR 617

Query: 148 LGQVEEARELAMRF--------------------------GSGV---------------S 166
           + ++ +A  L + +                            GV               +
Sbjct: 618 MKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN 677

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            Y   + GLC+  + ++A  +   + + GID      + +I+ LC   N+  ++ I+
Sbjct: 678 PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 169/546 (30%), Positives = 282/546 (51%), Gaps = 23/546 (4%)

Query: 36  VINSYRRVGLAEQ--ALKMFYRIREFGLKPTVKIYNHILDALLAENR-----FSMINPIY 88
           ++NS R +  A+   A+  F+R+      P ++ +N +L  L+A+++      S+I  ++
Sbjct: 43  LLNSIRTLETADAVVAVDFFHRMLTLTPFPCIQDFN-LLFGLVAKSQHYATAISLIKILH 101

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S    DG   +V T NI +  LC   +    + +L  M   G  P  V+  TIV+ +C  
Sbjct: 102 S--LGDG-SADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIE 158

Query: 149 GQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G V  A  L  +     +      Y AL+NGLCK      A   L +MV R + PNV+ Y
Sbjct: 159 GDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVY 218

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG--GRTHEASDLWNRM 261
           + I+  LC  G V  +LG+L +M V    PN+ ++  L++G L G  G   E   L+N M
Sbjct: 219 NAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQG-LCGEFGGWREGVGLFNEM 277

Query: 262 IRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           + E G +P+V  +S L+ G C  G +  A SV   M      PNV TY++LI G+     
Sbjct: 278 VAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQ 337

Query: 321 LLGASQIWNRMI--SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           +  A +++  M+    GC P+VV +  ++   C+     +A SL+ +M  +   P+  T+
Sbjct: 338 MEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTW 397

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            + I G C   +   A +L   MK++  +PN+ T   +LDGLL+     EA  L   + K
Sbjct: 398 TSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMK 457

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+ L+IV YN +L G+C+ G + +A +LL  +L++G K+D+ T+NI+I   C++G +++
Sbjct: 458 SGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDD 517

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A +LL +++  G   P+  SY   + G+     +  +  YLQ M ++G   +  T  +L+
Sbjct: 518 AEELLRKMKENG-CPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLI 576

Query: 559 RSLFSN 564
           R L +N
Sbjct: 577 RFLSAN 582



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 214/439 (48%), Gaps = 16/439 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++   +L+++M+  G  C+   + +++N   ++G    AL+   ++ +  L P V +YN
Sbjct: 160 DVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYN 219

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK----LLVE 125
            ILD L           +   M    +EPNV TYN L++ LC      G ++    L  E
Sbjct: 220 AILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEF---GGWREGVGLFNE 276

Query: 126 M-GNKGCAPDAVSYTTIVSSICKLG---QVEEARELAMRFG--SGVSVYNALINGLCKEH 179
           M   KG  PD  +++ +V   CK G   + E      +R G    V  YN+LI G C   
Sbjct: 277 MVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRS 336

Query: 180 KIEEAFWLLCEMVDRGID--PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           ++EEA  +   MV  G    P+V+T++++I   C V  V+ ++ +L +M  +G +P++ +
Sbjct: 337 QMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFT 396

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +TSL+ G+    +   A +L+  M   G +PN+   + ++ GL       EAV++   M 
Sbjct: 397 WTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMM 456

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           ++    ++  Y+ ++DG  K G L  A ++ + ++  G   +   Y  M+K LC+  +  
Sbjct: 457 KSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLD 516

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  L+ KM    CPPN  ++N F++GL     +  + K L  MK  +  P   T  ELL
Sbjct: 517 DAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKD-KGFPVDATTAELL 575

Query: 418 DGLLRVNRVKEAFELVTEI 436
              L  N   ++F+   +I
Sbjct: 576 IRFLSANEEDKSFKEFPQI 594



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 214/455 (47%), Gaps = 30/455 (6%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++N     G    AL +  ++   G     + Y  +++ L      S        M + 
Sbjct: 150 TIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKR 209

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + PNV  YN +L  LCK   V  A  LL EMG     P+ V+Y  ++  +C  G+    
Sbjct: 210 NLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLC--GEFGGW 267

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           RE       GV ++N ++                    ++GI P+V T+S ++   C  G
Sbjct: 268 RE-------GVGLFNEMV-------------------AEKGIVPDVQTFSILVDGFCKEG 301

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR--EGFLPNVVA 272
            +  +  ++G M   G  PN+ ++ SL+ GY L  +  EA  ++  M+R  EG LP+VV 
Sbjct: 302 LLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVT 361

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           +++LIHG C    +D+A+S+  +M      P+V T+++LI GF +    L A +++  M 
Sbjct: 362 HNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMK 421

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G  PN+     ++  L +  +  +A +L   M       + V +N  + G+C  G+++
Sbjct: 422 EHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLN 481

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A KLL  +       +  TYN ++ GL R   + +A EL+ ++++ G   N  +YN  +
Sbjct: 482 DARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFV 541

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            G+ R   +  + + L  M  +G  +DA T  ++I
Sbjct: 542 QGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLI 576



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 5/160 (3%)

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ T N  ++ L  + +    F ++  + K G++  +VT NTI++G+C  G V  A  L+
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNPDIISYTSLLWGI 526
            KM   G   +A T+  ++   CK G  + A++ L ++  R  G   P+++ Y ++L G+
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLG---PNVVVYNAILDGL 225

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           C  G + EA   L +M    + PN  T+N L++ L    G
Sbjct: 226 CKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFG 265



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 1/136 (0%)

Query: 8   KCEIDG-VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           KC +D     L + M   G+     ++  +++   ++G    A K+   +   GLK    
Sbjct: 441 KCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSY 500

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN ++  L  E        +   MK +G  PN  +YN+ ++ L +   +  + K L  M
Sbjct: 501 TYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIM 560

Query: 127 GNKGCAPDAVSYTTIV 142
            +KG   DA +   ++
Sbjct: 561 KDKGFPVDATTAELLI 576


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 287/570 (50%), Gaps = 19/570 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+       ID    +L +M++ GV  SE  + +++N Y +V +   A+ +   ++  G
Sbjct: 371 MIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRG 430

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +     +   ++D        S    I  +M  DG++P+V TY+ L+  +C+  ++    
Sbjct: 431 ITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETK 490

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGV----SVYNALINGL 175
           ++L  M   G  P+ V YTT++   CK G V+EA +     +  G+     ++NAL++  
Sbjct: 491 EILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAF 550

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +E  I EA      M    I  + ++++ II S C  GN+  +  +   M   G +PN+
Sbjct: 551 YREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNV 610

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL+G   GG   +A    + ++   F  +   ++ L+ G+C  G++DEA+ +  +
Sbjct: 611 CTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEK 670

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +N+C P++ TY+ L+ GF + G +L A  I   M+  G  P+ VAYTC++  L     
Sbjct: 671 MIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQ 730

Query: 356 FHQA----HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
              A    H +I K   E    + + +N+ + G      V+   +++  M Q E  PN  
Sbjct: 731 VKAASYVFHEIICK---EGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSA 787

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           +YN L+ G ++  +  ++  L   + + GI+ + VTY  ++ G+   G++  A + L KM
Sbjct: 788 SYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM 847

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW---NPDIISYTSLLWGICN 528
           ++EG   D + F+I+I A+ ++ K++NA+Q+ + ++    W   +P   ++++++ G+  
Sbjct: 848 VLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMK----WLHMSPSSKTFSAMINGLIR 903

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            G +  +   L +ML  G+ PN   +  LV
Sbjct: 904 KGYLDHSHKVLHEMLQVGLQPNHTHYIALV 933



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 263/529 (49%), Gaps = 8/529 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++NS    G   +A  M  +++   +  +V  YN IL   + + RF     +  +M+RD 
Sbjct: 232 LLNSLCTNGEFRKAEDMLQKMKSCHISNSV-TYNTILHWYVKKGRFKAALCVLEDMERDS 290

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++ +V+TYNI++  LC+  R   A+ LL  M      PD  +Y T+++   + G++  AR
Sbjct: 291 VQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHAR 350

Query: 156 E-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                 L       V+ Y  +I+G C+  +I++A  +L EM   G+ P+ +TYS +++  
Sbjct: 351 YVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGY 410

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C V  +  ++ ++  +  RG   N    T L+ G+   G   +A  +   M  +G  P+V
Sbjct: 411 CKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDV 470

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + YS LI+G+C    M E   +  +M+++   PN   Y+ LI  + KAG +  A + +  
Sbjct: 471 ITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVD 530

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G   N V +  ++    +  M  +A    + M+  N   ++V+FN  I   C  G 
Sbjct: 531 IYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGN 590

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A  + D M +Y   PN+ TY  LL GL +   + +A + ++ +      ++  T+N 
Sbjct: 591 IVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNA 650

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L G+CR G + EA  L  KM+      D  T+ I++  +C++GK+  A+ +L  +   G
Sbjct: 651 LLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKG 710

Query: 511 EWNPDIISYTSLLWGICNSGGMQEA-FIYLQKMLNEGICPNFATWNVLV 558
              PD ++YT LL G+ N G ++ A +++ + +  EG+  +   +N L+
Sbjct: 711 VV-PDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLM 758



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 280/589 (47%), Gaps = 42/589 (7%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            +L +M+  G+  ++ ++ ++I  Y + G  ++ALK F  I   GL     I+N +L A  
Sbjct: 492  ILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFY 551

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             E   +        M R  +  +  ++N ++ + C    + GA+ +  +M   G +P+  
Sbjct: 552  REGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVC 611

Query: 137  SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            +Y  ++  +C+ G + +AR+     L + F      +NAL+ G+C+   ++EA  L  +M
Sbjct: 612  TYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKM 671

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +     P++ TY+ ++S  C  G +  +L IL  M  +G  P+  ++T LL G +  G+ 
Sbjct: 672  IKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQV 731

Query: 252  HEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              AS +++ +I +EG   + +AY++L++G   + +++    +   M +N   PN  +Y+ 
Sbjct: 732  KAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNI 791

Query: 311  LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE- 369
            L+ G+ K G    +  ++  M+  G  P+ V Y  ++  L +  +   A   +EKM  E 
Sbjct: 792  LMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEG 851

Query: 370  ----------------------------NC------PPNTVTFNTFIKGLCGCGRVDWAM 395
                                        NC       P++ TF+  I GL   G +D + 
Sbjct: 852  IFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSH 911

Query: 396  KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            K+L +M Q    PN T Y  L++   RV  +  AF L  E++  GI    V  ++I+ G+
Sbjct: 912  KVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGL 971

Query: 456  CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            CR G + EA  +   M+  G      TF  ++++ CK+ K+ +A+ L  R+        D
Sbjct: 972  CRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHL-KRLMELCRLRVD 1030

Query: 516  IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            ++SY  L+ G+C    + +A     +M ++G+ PN  T+  L  +++S 
Sbjct: 1031 VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYST 1079



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 274/590 (46%), Gaps = 48/590 (8%)

Query: 16   YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
            YL++ +K  G++ ++ +   +I+ + +VG   +A ++   + E G+ P V  Y+ +++ +
Sbjct: 421  YLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGM 480

Query: 76   LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                +      I S M++ G+ PN   Y  L+   CK   V  A K  V++  +G   + 
Sbjct: 481  CRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANP 540

Query: 136  VSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            V +  ++ +  + G + EA         M        +N +I+  C    I  AF +  +
Sbjct: 541  VIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDD 600

Query: 191  MVDRGIDPNVITYSTIISSLCD-----------------------------------VGN 215
            MV  G  PNV TY  ++  LC                                     G 
Sbjct: 601  MVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGT 660

Query: 216  VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
            ++ +L +  +M    C P+IH++T LL G+   G+   A  +   M+ +G +P+ VAY+ 
Sbjct: 661  LDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTC 720

Query: 276  LIHGLCSNGSMDEAVSVSYQMEENSCP----PNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            L++GL + G +  A   SY   E  C      +   Y++L++G+ K+ N+    ++ + M
Sbjct: 721  LLNGLINEGQVKAA---SYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDM 777

Query: 332  ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              N   PN  +Y  ++    +   F ++  L + M  +   P+ VT+   I GL  CG +
Sbjct: 778  YQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLI 837

Query: 392  DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
            D A+K L++M      P+   ++ L+      +++  A ++   ++   +  +  T++ +
Sbjct: 838  DIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAM 897

Query: 452  LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
            ++G+ R G +  + ++L +ML  G + +   +  ++ A C+ G+++ A +L + ++  G 
Sbjct: 898  INGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIG- 956

Query: 512  WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              P  ++ +S++ G+C  G ++EA I    M+  G+ P  AT+  L+ SL
Sbjct: 957  IVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSL 1006



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 153/621 (24%), Positives = 272/621 (43%), Gaps = 63/621 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVG-----LAEQALKMFYRIREF------------ 59
           +L+ + V G SC+  +F S++ +  R       + E  +K + + R+             
Sbjct: 126 VLKHLAVTGFSCT-AIFTSLLRTISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDD 184

Query: 60  -GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G K +    N IL+AL+ E     +               V T NILL +LC N     
Sbjct: 185 CGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRK 244

Query: 119 AYKLLVEMGNKGCA-PDAVSYTTIVSSICKLGQVEEAR---ELAMR--FGSGVSVYNALI 172
           A  +L +M  K C   ++V+Y TI+    K G+ + A    E   R    + V  YN +I
Sbjct: 245 AEDMLQKM--KSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMI 302

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           + LC+  +   AF LL  M    + P+  TY+T+I+     G +  +  +   M  +   
Sbjct: 303 DKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLV 362

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ ++T+++ GY    R  +A  + + M   G +P+ + YS L++G C    +  A+ +
Sbjct: 363 PSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYL 422

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              ++      N T  + LIDGF + G +  A QI   M  +G  P+V+ Y+ ++  +C+
Sbjct: 423 MEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCR 482

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL-------------- 398
               H+   ++ +M      PN V + T I   C  G V  A+K                
Sbjct: 483 MAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVI 542

Query: 399 -----------------DQMKQYECLPNIT----TYNELLDGLLRVNRVKEAFELVTEIE 437
                            +  +QY    NI+    ++N ++D       +  AF +  ++ 
Sbjct: 543 HNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMV 602

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G   N+ TY  +L G+C+ G +V+A Q +  +L     +D  TFN ++   C+ G ++
Sbjct: 603 RYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLD 662

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+ L +++       PDI +YT LL G C  G +  A + LQ ML +G+ P+   +  L
Sbjct: 663 EALDLCEKMIKNNCL-PDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCL 721

Query: 558 VRSLFSNLGHLGPVYILDDIM 578
           +  L +        Y+  +I+
Sbjct: 722 LNGLINEGQVKAASYVFHEII 742



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/541 (24%), Positives = 242/541 (44%), Gaps = 41/541 (7%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            I   ++  Q M    +S     F  +I+SY   G    A  ++  +  +G  P V  Y +
Sbjct: 556  ITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQN 615

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            +L  L             S +       +  T+N LL  +C+   +D A  L  +M    
Sbjct: 616  LLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN 675

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEAF 185
            C PD  +YT ++S  C+ G++  A   L M    GV      Y  L+NGL  E +++ A 
Sbjct: 676  CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 735

Query: 186  WLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
            ++  E++   G+  + I Y+++++      NV T   ++  M+     PN  S+  L+ G
Sbjct: 736  YVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHG 795

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-------- 296
            Y+  G+  ++  L+  M+R+G  P+ V Y  LI GL   G +D AV    +M        
Sbjct: 796  YVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 855

Query: 297  -----------EENS----------------CPPNVTTYSALIDGFAKAGNLLGASQIWN 329
                        E S                  P+  T+SA+I+G  + G L  + ++ +
Sbjct: 856  RLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLH 915

Query: 330  RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
             M+  G  PN   Y  +V   C+     +A  L E+M      P  V  ++ I+GLC CG
Sbjct: 916  EMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCG 975

Query: 390  RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +++ A+ +   M +   +P + T+  L+  L + +++ +A  L   +E C +++++V+YN
Sbjct: 976  KLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYN 1035

Query: 450  TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
             ++ G+C+   + +A  L G+M  +G   +  T+  +  A    G+V N  +LL+ I   
Sbjct: 1036 VLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEER 1095

Query: 510  G 510
            G
Sbjct: 1096 G 1096



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 133/265 (50%), Gaps = 9/265 (3%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            ID     L++M +EG+     VF  +I ++        AL++F  ++   + P+ K ++ 
Sbjct: 837  IDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSA 896

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            +++ L+ +      + +   M + G++PN   Y  L+ A C+   +D A++L  EM   G
Sbjct: 897  MINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIG 956

Query: 131  CAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAF 185
              P  V+ ++I+  +C+ G++EEA       MR G    V+ +  L++ LCKE KI +A 
Sbjct: 957  IVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADAL 1016

Query: 186  WL--LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
             L  L E+    +D  V++Y+ +I+ LC   ++  +L + G+M  +G  PNI ++ +L  
Sbjct: 1017 HLKRLMELCRLRVD--VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTG 1074

Query: 244  GYLLGGRTHEASDLWNRMIREGFLP 268
                 GR     +L   +   G +P
Sbjct: 1075 AMYSTGRVQNGEELLEDIEERGLIP 1099



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 76/148 (51%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            EID    L ++MK  G+  +E    S+I    R G  E+A+ +F  +   G+ PTV  + 
Sbjct: 941  EIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFT 1000

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++ +L  E++ +    +   M+   +  +V +YN+L+  LCK+  +  A  L  EM +K
Sbjct: 1001 TLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSK 1060

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEAREL 157
            G  P+  +Y T+  ++   G+V+   EL
Sbjct: 1061 GLWPNITTYITLTGAMYSTGRVQNGEEL 1088


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 238/456 (52%), Gaps = 25/456 (5%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  +  IL +L+  N +     ++  M+  G+  N+ T NIL+    +  +   ++ +
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIE 182
              +  KG  P+ ++ TT++  +C          L + +G+       LINGLCK  +  
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLC----------LKVSYGT-------LINGLCKVGQAR 160

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  LL  +  + + PNV+ Y+TII S+C V  V  +  +  +M   G +P++ ++++L+
Sbjct: 161 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALI 220

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+ + G+  +A DL+N+MI E   P+V  ++ L+ G C +G M E  +V   M +    
Sbjct: 221 SGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 280

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PNV TY +L+DG+     +  A+ I+N M   G +P+  +Y  M+   C+     +A +L
Sbjct: 281 PNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNL 340

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            +KM  +N  PN VT+ + I GLC  G++ +A+KL+D+M      P+I TY+ +LD L +
Sbjct: 341 FKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 400

Query: 423 VNRVKEAFELVTEIEK--------CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++V +A  L+T+++          G  L++  Y  ++ G C  G+  EA  LL KM   
Sbjct: 401 NHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDN 460

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           G   DA T+ III +  K+ + + A +LL  +   G
Sbjct: 461 GRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 206/416 (49%), Gaps = 20/416 (4%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +  ++  L K +    A  L  +M  +GI  N++T + +I+    +G    S  +   + 
Sbjct: 63  FGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANIL 122

Query: 228 VRGCNPNIHSFTSLLKGYLLG-------------GRTHEASDLWNRMIREGFLPNVVAYS 274
            +G +PN+ + T+L+KG  L              G+   A  L  R+  +   PNVV Y+
Sbjct: 123 KKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYN 182

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           T+I  +C    ++EA  +  +M      P+V TYSALI GF   G L  A  ++N+MI  
Sbjct: 183 TIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILE 242

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
              P+V  +  +V   C++    +  ++   M  +   PN VT+ + + G C   +V+ A
Sbjct: 243 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 302

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             + + M Q    P+  +YN +++G  ++ +V EA  L  ++    I  N+VTY +++ G
Sbjct: 303 NSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDG 362

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG----- 509
           +C++G +  A +L+ +M   G   D IT++ I+ A CK  +V+ AI LL +++       
Sbjct: 363 LCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDL 422

Query: 510 --GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
               +N D+ +YT ++ G C  G   EA   L KM + G  P+  T+ +++ SLF 
Sbjct: 423 FVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFK 478



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 212/411 (51%), Gaps = 26/411 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM+++G++ +      +IN + ++G    +  +F  I + G  P V     ++  L 
Sbjct: 82  LHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLC 141

Query: 77  AENRF-SMINPI---------YSNMKR-DG--MEPNVFTYNILLKALCKNNRVDGAYKLL 123
            +  + ++IN +            ++R DG  ++PNV  YN ++ ++CK   V+ A+ L 
Sbjct: 142 LKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 201

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKE 178
            EM ++G +PD V+Y+ ++S    +G++++A +L  +         V  +N L++G CK+
Sbjct: 202 SEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKD 261

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            K++E   +   M+ +GI PNV+TY +++   C V  V  +  I   M   G NP+  S+
Sbjct: 262 GKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSY 321

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             ++ G+    +  EA +L+ +M  +  +PNVV Y++LI GLC +G +  A+ +  +M +
Sbjct: 322 NIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHD 381

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGA--------SQIWNRMISNGCSPNVVAYTCMVKVL 350
              PP++ TYS+++D   K   +  A         Q++  +   G + +V AYT M++  
Sbjct: 382 RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGF 441

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           C   +F++A +L+ KM      P+  T+   I  L      D A KLL +M
Sbjct: 442 CVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 25/387 (6%)

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           EH +  +F  L     +   P +  +  I+ SL  +    T++ +  QM ++G   N+ +
Sbjct: 40  EHNLVSSFNRLLH--QKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVT 97

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
              L+  +   G+   +  ++  ++++G+ PNV+  +TLI GLC   S            
Sbjct: 98  LNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVS------------ 145

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                     Y  LI+G  K G    A Q+  R+      PNVV Y  ++  +C+  + +
Sbjct: 146 ----------YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 195

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  L  +M  E   P+ VT++  I G    G++  A+ L ++M      P++ T+N L+
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 255

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DG  +  ++KE   +   + K GI+ N+VTY +++ G C    V +A  +   M   G  
Sbjct: 256 DGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D  ++NI+I  +CK  KV+ A+ L  ++       P++++YTSL+ G+C SG +  A  
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNII-PNVVTYTSLIDGLCKSGKISYALK 374

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
            + +M + G+ P+  T++ ++ +L  N
Sbjct: 375 LVDEMHDRGVPPDIITYSSILDALCKN 401



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 170/343 (49%), Gaps = 16/343 (4%)

Query: 9   CEIDGVQYLLQQMK-VEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C++   +  LQ ++ V+G      V +  ++I+S  +V L  +A  ++  +   G+ P V
Sbjct: 154 CKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDV 213

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y+ ++       +      +++ M  + ++P+V+T+NIL+   CK+ ++     +   
Sbjct: 214 VTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAM 273

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHK 180
           M  +G  P+ V+Y +++   C + QV +A  +      G        YN +ING CK  K
Sbjct: 274 MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKK 333

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           ++EA  L  +M  + I PNV+TY+++I  LC  G +  +L ++ +M  RG  P+I +++S
Sbjct: 334 VDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 393

Query: 241 LLKGYLLGGRTHEASDLWNR--------MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           +L       +  +A  L  +        +  +G+  +V AY+ +I G C  G  +EA+++
Sbjct: 394 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
             +ME+N   P+  TY  +I    K      A ++   MI+ G
Sbjct: 454 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 14/229 (6%)

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT     + +N+  +   S    +  +N  P    F   +  L        A+ L  QM+
Sbjct: 28  YTLNYITIIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQME 87

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI----------- 451
                 N+ T N L++   ++ +   +F +   I K G   N++T  T+           
Sbjct: 88  LKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYG 147

Query: 452 --LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
             ++G+C+ G    A QLL ++  +  + + + +N II + CK   VN A  L   +   
Sbjct: 148 TLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSE 207

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G  +PD+++Y++L+ G    G +++A     KM+ E I P+  T+N+LV
Sbjct: 208 G-ISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 255


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/528 (27%), Positives = 264/528 (50%), Gaps = 15/528 (2%)

Query: 49  ALKMFYRIREFGLKP-----TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           AL +F R+      P     TV  Y+ ++D      R  +   ++  + R G++ +  T 
Sbjct: 136 ALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITA 195

Query: 104 NILLKALCKNNRVDGAYKLLV-EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----A 158
           + LLK LC  NR + A  +L+  M   GC P+  SY+ I+  +C     + A +L    A
Sbjct: 196 STLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMA 255

Query: 159 MRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              G+    V  YN +I+G  KE +  +A  L  EM  +G+ P+V+TY+ II +LC    
Sbjct: 256 KEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARA 315

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ +  +L QM   G  P+  ++  ++ GY   GR  EA+ ++ +M   G +PN+V  ++
Sbjct: 316 MDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNS 375

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            +  LC +G   EA  +   M      P++ +Y  L+ G+A  G       ++N M SNG
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            + +   +  ++    +  M   A  +  +M  +   P+ VT++T I      GR+  AM
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHG 454
           +  +QM      PN   Y+ ++ G      + +A ELV+E+   GI + +IV +N++++ 
Sbjct: 496 EKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINS 555

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+ G V++A  +   +   G + D ITF  +I  YC  GK++ A ++LD +   G    
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG-VET 614

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           DI++Y++LL G   +G + +     ++M  +G+ PN  T+ +++  LF
Sbjct: 615 DIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 266/544 (48%), Gaps = 41/544 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM   G       +  +I+ Y  +G  ++A KMF +++  G
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRG 365

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY----------------- 103
           L P + I N  L +L    R      I+ +M   G +P++ +Y                 
Sbjct: 366 LIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMI 425

Query: 104 ------------------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                             NIL+ A  K   VD A  +  EM  +G +PD V+Y+T++S+ 
Sbjct: 426 GLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAF 485

Query: 146 CKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID-PN 199
            ++G++ +A E     +A       +VY+++I G C    + +A  L+ EM+++GI  P+
Sbjct: 486 SRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPD 545

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           ++ ++++I+SLC  G V  +  I   +   G  P++ +FTSL+ GY L G+  +A  + +
Sbjct: 546 IVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILD 605

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M   G   ++V YSTL+ G   NG +++ +++  +M+     PN  TY  ++ G  +AG
Sbjct: 606 AMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAG 665

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             + A + ++ MI +G +  V  Y  ++  LC+NN   +A  L +K+   N   +    N
Sbjct: 666 RTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILN 725

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I  +    R + A +L   +     LPN +TY  ++  LL+   V++A  + + +EK 
Sbjct: 726 TMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS 785

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI       N I+  +   G + +A   L K+  +   L+A T ++++  + ++GK +  
Sbjct: 786 GIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHED 845

Query: 500 IQLL 503
           ++LL
Sbjct: 846 MKLL 849



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 257/554 (46%), Gaps = 9/554 (1%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           L Q M  EG +CS  V  + +VI+ + + G   +A  +F+ +   G+KP V  YN I+DA
Sbjct: 250 LFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           +   M  +G +P+  TYN ++       R+  A K+  +M ++G  P+
Sbjct: 310 LCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPN 369

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V   + ++S+CK G+ +EA E+     A      +  Y  L++G   E    +   L  
Sbjct: 370 IVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFN 429

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M   GI  +   ++ +I +    G V+ ++ I  +M  +G +P++ ++++++  +   G
Sbjct: 430 SMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMG 489

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTY 308
           R  +A + +N+M+  G  PN   Y ++I G C +G + +A  +  +M     P P++  +
Sbjct: 490 RLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFF 549

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +++I+   K G ++ A  I++ +   G  P+V+ +T ++   C      +A  +++ M  
Sbjct: 550 NSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
                + VT++T + G    GR++  + L  +M++    PN  TY  +L GL R  R   
Sbjct: 610 VGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A +   E+ + G  + +  Y  IL G+CR     EA  L  K+     K      N +I 
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMIN 729

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A  K  +   A +L   I   G   P+  +Y  ++  +   G +++A      M   GI 
Sbjct: 730 AMYKVQRKEEAKELFATISASGLL-PNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIV 788

Query: 549 PNFATWNVLVRSLF 562
           P     N ++R L 
Sbjct: 789 PGSRLLNRIIRMLL 802


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 238/457 (52%), Gaps = 40/457 (8%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN +L  L    ++     + + M R+   PN  T+   +++ C+N  +D A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
           +LL +M   GC PD V Y+T+++   + G V++A +L   M        YNA + GLC  
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIA 122

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN---- 234
            + E+   L+ EMV +G  PN  T+S +ISSLC    V++++ +L QM   GC P+    
Sbjct: 123 ERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNY 182

Query: 235 ---IHS-------------------------FTSLLKGYLLGGRTHEASDLWNRMIREGF 266
              I+S                         F ++LKG+    R H+AS+L  +M R+  
Sbjct: 183 NIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDC 242

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
               + ++ LI  LC NG ++ A  V  QM    C P++ TYS+L++GF++ G +  A Q
Sbjct: 243 PLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQ 302

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M    C P++ +Y  ++K LC+   +  A  LI +M  ++CPPN VTFN  I  LC
Sbjct: 303 LFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLC 359

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G VD A+++L+QM  Y   P+I TYN L++G     R+ +A +L++ +     + + +
Sbjct: 360 QKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAI 416

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           +YN+ L G+CRA    +A +L+ +ML      + +TF
Sbjct: 417 SYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 147/499 (29%), Positives = 243/499 (48%), Gaps = 72/499 (14%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+ +TYN +LK LC   + + A +L+ EM    C P+ V++ T + S C+          
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQ---------- 54

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                          NGL     ++ A  LL +M   G  P+V+ YST+I+   + G+V+
Sbjct: 55  ---------------NGL-----LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVD 94

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +L  M    C PN   + + LKG  +  R  +  +L   M+R+G  PN   +S LI
Sbjct: 95  QALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLI 151

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC N  +D AV V  QME+  C P+   Y+ +I+  ++ G +  A ++ N M+   C 
Sbjct: 152 SSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CK 208

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ + +  ++K  C+   +H A  LI +M  ++CP   +TFN  I  LC  G V++A ++
Sbjct: 209 PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQV 268

Query: 398 LDQMKQYECLPNITTYNELLDG--------------------------------LLRVNR 425
            +QM +Y C P+I TY+ LL+G                                L R  R
Sbjct: 269 FEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAAR 328

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            ++A EL+ E+       N VT+N +++ +C+ G+V  A ++L +M   G+  D  T+N 
Sbjct: 329 WEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNA 388

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  + +QG++++A++LL  +       PD ISY S L G+C +   Q+A   + +ML  
Sbjct: 389 LINGFSEQGRLDDALKLLSTM----SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 444

Query: 546 GICPNFATWNVLVRSLFSN 564
              PN  T+      L  N
Sbjct: 445 KCTPNEVTFKYANHLLMPN 463



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 210/418 (50%), Gaps = 12/418 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL QM   G +    ++ ++IN +   G  +QAL +   +     KP    YN 
Sbjct: 58  LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNA 114

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            L  L    R+  I  + + M R G  PN  T+++L+ +LC+NN VD A ++L +M   G
Sbjct: 115 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 174

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           C PD V+Y  I++S+ + G+V++A  L  +M        +NA++ G C+  +  +A  L+
Sbjct: 175 CEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASELI 234

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M         +T++ +I  LC  G V  +  +  QM    C P+I +++SLL G+   
Sbjct: 235 AQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQ 294

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G    A  L+  M  +   P++ +Y+ ++ GLC     ++A  +  +M    CPPN  T+
Sbjct: 295 GLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTF 351

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LI+   + G +  A ++  +M + G +P++  Y  ++    +      A  L+  M+ 
Sbjct: 352 NILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS- 410

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             C P+ +++N+ +KGLC   R   A +L+ +M + +C PN  T+ +  + LL  NR 
Sbjct: 411 --CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF-KYANHLLMPNRA 465



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 190/366 (51%), Gaps = 10/366 (2%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+  TY+T++  LC     E +  ++ +M    C PN  +F + ++ +   G    A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L ++M R G  P+VV YSTLI+G    G +D+A+ +   M    C PN   Y+A + G 
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---LCKPNTVCYNAALKGL 119

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
             A       ++   M+  GCSPN   ++ ++  LCQNN+   A  ++E+M    C P+T
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V +N  I  L   GRVD A++LL+ M    C P+   +N +L G  R  R  +A EL+ +
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQ 236

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + +    L  +T+N ++  +C+ G+V  A Q+  +M       D +T++ ++  + +QG 
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGL 296

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V  AIQL   +       PDI SY ++L G+C +   ++A   + +M+ +   PN  T+N
Sbjct: 297 VEVAIQLFRSM----PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFN 352

Query: 556 VLVRSL 561
           +L+ SL
Sbjct: 353 ILINSL 358



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 8/310 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    +L+QM+  G       +  +INS    G  + AL++   +    
Sbjct: 150 LISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL---LNSMV 206

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP    +N +L       R+   + + + M RD       T+NIL+  LC+N  V+ A 
Sbjct: 207 CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYAT 266

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKE 178
           ++  +M    C PD V+Y+++++   + G VE A +L  +M     +  YNA++ GLC+ 
Sbjct: 267 QVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNAVLKGLCRA 326

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            + E+A  L+ EMV +   PN +T++ +I+SLC  G V+ ++ +L QM   G  P+I ++
Sbjct: 327 ARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTY 386

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G+   GR  +A  L + M      P+ ++Y++ + GLC      +A  +  +M  
Sbjct: 387 NALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLR 443

Query: 299 NSCPPNVTTY 308
           N C PN  T+
Sbjct: 444 NKCTPNEVTF 453


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/557 (29%), Positives = 263/557 (47%), Gaps = 17/557 (3%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D ++   + +KV G+  +  V  S+IN Y + G   +  ++   +R+  LKP    Y  +
Sbjct: 190 DAIRVRDEMLKV-GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTL 248

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +D    +   S    +   M R G+EP V TYN LLK LC+      A +L   M  +G 
Sbjct: 249 VDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGV 308

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            P+ V Y T++  + K+G    A  L     A      +  +N +INGLCK  +++ A  
Sbjct: 309 TPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKE 368

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
               M + G  P+ ITY T+    C VGNVE +  I  +M      P+I  + SL+ G  
Sbjct: 369 TFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLF 428

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              +  +  DL   M   G  PNVV Y  LI G C  G +D+A S  ++M      PNV 
Sbjct: 429 TSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVI 488

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH-----S 361
             S ++    + G +  A+ +  +M+       V+ + C+     QN    +        
Sbjct: 489 ICSKIVSSLYRLGRIDEANMLLQKMVDFDL---VLDHRCLEDF--QNADIRKLDCWKIAD 543

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            +++ A +   PN V +N  + GLC  G+V+ A +    +      P+  TY  L+ G  
Sbjct: 544 TLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFS 603

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               V EAF L  E+   G+  NI TYN +L+G+C++G +  A +L  K+ ++G   + +
Sbjct: 604 AAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVV 663

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+NI+I  YCK G    A+ L  ++   G  +P II+Y+SL+ G C    ++EA   L +
Sbjct: 664 TYNILIDGYCKSGSPREALDLRGKMLKEG-ISPSIITYSSLINGFCKQSDVEEAMKLLNE 722

Query: 542 MLNEGICPNFATWNVLV 558
           M    +    AT++ LV
Sbjct: 723 MKASNVDQTIATFSKLV 739



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 261/516 (50%), Gaps = 9/516 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++  Y   G+ + AL +F  + ++G KP+++  N +L  L+          +Y  M+R  
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+VFT  I++ A CK  +V+ A + + EM   G   +AVSY ++V     LG +E A+
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 156 ELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYSTIIS 208
            + ++F S   V         LI G CK+ K+EEA  +L EM  + G+  +   Y  +I 
Sbjct: 122 GV-LKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C VG +  ++ +  +M   G   N+    SL+ GY   G+ HE   L   M +    P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +  +Y TL+ G C +G   +A +V  QM      P V TY+ L+ G  + G+   A ++W
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + M+  G +PN V Y  ++  L +   F +A +L + +       +   FNT I GLC  
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G +D A +   +M++  C P+  TY  L DG  +V  V+EAF++  ++EK  I  +I  Y
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMY 420

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N+++ G+  +  + +   LL +M   G   + +T+  +I  +C QG+++ A      + G
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIG 480

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            G + P++I  + ++  +   G + EA + LQKM++
Sbjct: 481 KG-FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD 515



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 166/634 (26%), Positives = 280/634 (44%), Gaps = 112/634 (17%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++N+Y + G  E+A++    + + G +     YN ++D  ++         +   M   G
Sbjct: 72  MVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKG 131

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEA 154
           +  N  T  +L+K  CK  +V+ A K+L EM  + G   D  +Y  ++   CK+G++ +A
Sbjct: 132 VMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDA 191

Query: 155 ---RELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLL---------------CEMVD- 193
              R+  ++ G  ++++  N+LING CK  ++ E   LL               C +VD 
Sbjct: 192 IRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDG 251

Query: 194 -------------------RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
                              +GI+P V+TY+T++  LC  G+ + +L +   M  RG  PN
Sbjct: 252 YCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPN 311

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
              + +LL G    G    A  LW+ ++  G   ++ A++T+I+GLC  G MD A     
Sbjct: 312 EVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFK 371

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNL---------------LGASQIWNRMI------- 332
           +MEE  C P+  TY  L DG+ K GN+                 + +++N +I       
Sbjct: 372 RMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSK 431

Query: 333 -------------SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
                        + G SPNVV Y  ++   C      +A S   +M  +   PN +  +
Sbjct: 432 KISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICS 491

Query: 380 TFIKGLCGCGRVDWAMKLLDQM--------------------KQYEC------------- 406
             +  L   GR+D A  LL +M                    ++ +C             
Sbjct: 492 KIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIK 551

Query: 407 --LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             LPN   YN  + GL +  +V +A      +       +  TY T++HG   AG V EA
Sbjct: 552 FSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEA 611

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           F L  +M+ +G   +  T+N ++   CK G ++ A +L D++   G   P++++Y  L+ 
Sbjct: 612 FNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKG-LIPNVVTYNILID 670

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G C SG  +EA     KML EGI P+  T++ L+
Sbjct: 671 GYCKSGSPREALDLRGKMLKEGISPSIITYSSLI 704



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 234/490 (47%), Gaps = 42/490 (8%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
            QM  +G+  +   + +++    R G  + AL++++ + + G+ P    Y  +LD L   
Sbjct: 266 DQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKM 325

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
             FS    ++ ++   G+  +++ +N ++  LCK   +DGA +    M   GC PD ++Y
Sbjct: 326 GDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITY 385

Query: 139 TTIVSSICKLGQVEEA------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            T+    CK+G VEEA       E    F S + +YN+LI GL    KI +   LL EM 
Sbjct: 386 RTLSDGYCKVGNVEEAFKIKEKMEKEEIFPS-IEMYNSLIVGLFTSKKISKLIDLLAEMD 444

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            RG+ PNV+TY  +I+  CD G ++ +     +M  +G  PN+   + ++      GR  
Sbjct: 445 TRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRID 504

Query: 253 EASDLWNRMIR----------EGF-------------------------LPNVVAYSTLI 277
           EA+ L  +M+           E F                         LPN V Y+  +
Sbjct: 505 EANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAM 564

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLC +G +++A      +   S  P+  TY  LI GF+ AG +  A  + + M++ G  
Sbjct: 565 AGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLV 624

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PN+  Y  ++  LC++    +A  L +K+  +   PN VT+N  I G C  G    A+ L
Sbjct: 625 PNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDL 684

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M +    P+I TY+ L++G  + + V+EA +L+ E++   +   I T++ ++ G  +
Sbjct: 685 RGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQ 744

Query: 458 AGMVVEAFQL 467
            G V +  +L
Sbjct: 745 HGDVKKMSKL 754



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 233/511 (45%), Gaps = 43/511 (8%)

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRF 161
           ++LK   +   V  A  +   MG  G  P   S  +++S++ K G+   A    +   R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 162 GSGVSVYNA--LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                V+    ++N  CK  K+E A   + EM   G + N ++Y++++     +G++E +
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIH 278
            G+L  M  +G   N  + T L+KGY    +  EA  +   M +E G + +  AY  LI 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C  G M +A+ V  +M +     N+   ++LI+G+ K G +    ++   M      P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +  +Y  +V   C++ +  +A ++ ++M  +   P  VT+NT +KGLC  G    A++L 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M Q    PN   Y  LLDGL ++     A  L  +I   GI  +I  +NT+++G+C+ 
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA------------------- 499
           G +  A +   +M   G K D IT+  +   YCK G V  A                   
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMY 420

Query: 500 ----------------IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
                           I LL  +   G  +P++++Y +L+ G C+ G + +AF    +M+
Sbjct: 421 NSLIVGLFTSKKISKLIDLLAEMDTRG-LSPNVVTYGALIAGWCDQGRLDKAFSAYFEMI 479

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
            +G  PN    + +V SL+  LG +    +L
Sbjct: 480 GKGFAPNVIICSKIVSSLY-RLGRIDEANML 509



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 209/430 (48%), Gaps = 23/430 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  E+DG +   ++M+  G       + ++ + Y +VG  E+A K+  ++ +  
Sbjct: 353 MINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEE 412

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P++++YN ++  L    + S +  + + M   G+ PNV TY  L+   C   R+D A+
Sbjct: 413 IFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAF 472

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
               EM  KG AP+ +  + IVSS+ +LG+++EA  L  +          +   L  +H+
Sbjct: 473 SAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM---------VDFDLVLDHR 523

Query: 181 IEEAF----------WLLCEMVDRGID----PNVITYSTIISSLCDVGNVETSLGILGQM 226
             E F          W + + +D        PN + Y+  ++ LC  G V  +      +
Sbjct: 524 CLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGL 583

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 P+  ++ +L+ G+   G  +EA +L + M+ +G +PN+  Y+ L++GLC +G +
Sbjct: 584 SHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYL 643

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           D A  +  ++      PNV TY+ LIDG+ K+G+   A  +  +M+  G SP+++ Y+ +
Sbjct: 644 DRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSL 703

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C+ +   +A  L+ +M   N      TF+  ++G    G V    KL + M     
Sbjct: 704 INGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMACP 763

Query: 407 LPNITTYNEL 416
              IT++ ++
Sbjct: 764 SAGITSHKQM 773



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 175/376 (46%), Gaps = 39/376 (10%)

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I+    + G V+ +L +   M   G  P++ S  SLL   +  G ++ A  ++++M R  
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            +P+V   + +++  C  G ++ AV    +ME+     N  +Y++L+DG+   G++ GA 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +   M   G   N                                    VT    IKG 
Sbjct: 122 GVLKFMSEKGVMRN-----------------------------------KVTLTLLIKGY 146

Query: 386 CGCGRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           C   +V+ A K+L +M++ +  + +   Y  L+DG  +V ++ +A  +  E+ K G+++N
Sbjct: 147 CKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMN 206

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +   N++++G C+ G V E  +LL  M     K D+ ++  ++  YC+ G  + A  + D
Sbjct: 207 LFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCD 266

Query: 505 R-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + +R G E  P +++Y +LL G+C  G  ++A      ML  G+ PN   +  L+  LF 
Sbjct: 267 QMLRKGIE--PTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFK 324

Query: 564 NLGHLGPVYILDDIMA 579
                  + + DDI+A
Sbjct: 325 MGDFSRALTLWDDILA 340


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 261/530 (49%), Gaps = 34/530 (6%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS-MINPIYSNMKRD 94
           VI   RR+G  + A     R+   GL+ +  +++ +L  L    R S  ++ +   M   
Sbjct: 105 VIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPEL 164

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN-KG-CAPDAVSYTTIVSSICKLGQVE 152
           G +P++F+Y ILLK LC +     A  LL  M + KG C  D V+YTT+           
Sbjct: 165 GCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV----------- 213

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                              INGL +E ++++A+ L   M+DRG  P+V+TYS+IIS+L  
Sbjct: 214 -------------------INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSK 254

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              ++ +  +  +M   G  P+   +TSL+ GY   G+  EA  ++ +M R G  P+VV 
Sbjct: 255 TQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVT 314

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ L+  LC NG   EA  +   + +    P+ TTY  L+ G+A  G L+    + + M+
Sbjct: 315 YTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMM 374

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G       +  ++    ++N   +A  +   M  +   P+ V + T +  LC  GRVD
Sbjct: 375 KKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVD 434

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+   + +K     PNI  +  L+ GL   ++  +  EL  E+   GI L+ + +N I+
Sbjct: 435 DALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIM 494

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C+ G V+EA  L   M+  G + +  T+N +I  YC  GK++ A++LL  +   G  
Sbjct: 495 GNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG-V 553

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            P  ++Y +++ G   +G +++    L++M  +G+ P   T+ +L++ LF
Sbjct: 554 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLF 603



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/529 (25%), Positives = 256/529 (48%), Gaps = 15/529 (2%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM---EPNVFTYN 104
            A ++F R+ + G + ++   N  L  +   +    I+ +++ M R G     PN+ TY 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAIS-LFNRMPRAGATSAAPNIATYG 103

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF--- 161
           I++    +  R+D A+  +  +   G     + ++ ++  +C   +  +A ++ +R    
Sbjct: 104 IVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPE 163

Query: 162 ---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD-RGIDP-NVITYSTIISSLCDVGNV 216
                 +  Y  L+ GLC +   ++A  LL  M D +G  P +V+ Y+T+I+ L   G +
Sbjct: 164 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQL 223

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +   M  RG +P++ +++S++          +A+ ++ RM++ G +P+ + Y++L
Sbjct: 224 DKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSL 283

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +HG CS+G   EA+ +  +M  +   P+V TY+AL+D   K G    A +I++ ++  G 
Sbjct: 284 VHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGH 343

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+   Y  ++          + H L++ M  +        FN  +       +VD A+ 
Sbjct: 344 KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALL 403

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +   M+Q    P+I  Y  +LD L    RV +A      ++  G+  NIV + T++HG+C
Sbjct: 404 VFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLC 463

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD-RIRGGGEWNPD 515
                 +  +L  +M+  G  LD I FN I+   CK+G+V  A  L D  +R G E  P+
Sbjct: 464 TCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE--PN 521

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             +Y +L+ G C  G M EA   L  M+  G+ P+  T+N ++     N
Sbjct: 522 TNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQN 570



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 195/409 (47%), Gaps = 11/409 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + +VIN   R G  ++A  +F  + + G  P V  Y+ I+ AL           +++ M
Sbjct: 209 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 268

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            ++G+ P+   Y  L+   C + +   A  +  +M   G  PD V+YT ++  +CK G+ 
Sbjct: 269 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 328

Query: 152 EEARELAMRFGSGV--------SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
            EAR++   F S V        + Y  L++G   E  + E   LL  M+ +G+      +
Sbjct: 329 TEARKI---FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 385

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + I+ +      V+ +L +   M  +G NP+I ++ ++L      GR  +A   +N +  
Sbjct: 386 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 445

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           EG  PN+V ++TLIHGLC+    D+   ++++M +     +   ++A++    K G ++ 
Sbjct: 446 EGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 505

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  +++ M+  G  PN   Y  ++   C +    +A  L+  M F    P+ VT+NT I 
Sbjct: 506 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 565

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           G    GR++  + LL +M      P I TY  LL GL +  R   A EL
Sbjct: 566 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 196/412 (47%), Gaps = 5/412 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + ++D    L   M   G S     + S+I++  +    ++A ++F R+ + G
Sbjct: 213 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   +Y  ++    +  +      I+  M R G+EP+V TY  L+  LCKN +   A 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS--GVSVYNALINGL 175
           K+   +  +G  PD+ +Y T++      G + E  +L    M+ G   G  ++N ++   
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K +K++EA  +   M  +G++P+++ Y T++  LC  G V+ +L     +   G  PNI
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             FT+L+ G     +  +  +L   MI  G   + + ++ ++  LC  G + EA ++   
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ LIDG+   G +  A ++   M+ NG  P+ V Y  ++    QN  
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 572

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
                +L+ +M  +   P  VT+   ++GL   GR   A +L  +M +++ +
Sbjct: 573 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 624


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 259/498 (52%), Gaps = 18/498 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+KL +       + L + M   G+  +E  +  +I+S  + G+ + AL MF R+RE G
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ TV  YN +++     + F     + + M   G+ P+  +Y+ L+  LC+   +  A 
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
           +L  EM   G + +  ++TT++S  CK G ++EA  L  +      V     +N +I G 
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGY 520

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL-GQMFVRGCNPN 234
           C+   + +AF L  +MVDRG+ P+  TY ++IS LC       +LG +  + FV     N
Sbjct: 521 CRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLC------LTLGAMKAKEFVDDLENN 574

Query: 235 I-----HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
                  S T+L+ G+   GR  E   +W+ M   G   ++++++ +++        ++ 
Sbjct: 575 CVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKI 634

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +  +M+E    P+   ++ +ID  +K  N++ A   W++MI++GCSPNVV YT ++  
Sbjct: 635 SVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINH 694

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC++     A  L E+M      PN+ T+N F+  L   G ++ A K+L       CL N
Sbjct: 695 LCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLAN 753

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             T+N L+ G  +  +++ A +L+    + G   + ++Y+TI++ +C+ G + +AFQL  
Sbjct: 754 TVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWN 813

Query: 470 KMLIEGTKLDAITFNIII 487
           +ML +G K D + +NI+I
Sbjct: 814 EMLYKGLKPDIVAYNILI 831



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 275/582 (47%), Gaps = 46/582 (7%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
            M   G+   E  + +++  + R    E AL+M   +      P+V   + ++D L    
Sbjct: 255 SMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRG 314

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
                  +  ++   GM PN+F  N L+  LCK+ R   A +L   M N+G  P+ V+Y 
Sbjct: 315 HIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYA 374

Query: 140 TIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            ++ S+CK G +++A       RE  +R    V  YN+LING C+     +A  LL EMV
Sbjct: 375 ILIHSLCKRGMMDDALCMFDRMREKGIRVT--VYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           ++G+ P+  +YS +I+ LC  G++ +++ +  +M   G + N+++FT+L+ G+   G   
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA+ L+++MI    +PN V ++ +I G C  G++ +A  +  QM +    P+  TY +LI
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 313 D-----------------------------------GFAKAGNLLGASQIWNRMISNGCS 337
                                               GF K G L     IW+ M + G  
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVK 612

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            +++++T +V    + +   +   L  +M  +   P+ V     I        +  A+  
Sbjct: 613 LDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNC 672

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            D+M    C PN+ TY  L++ L +   +  A  L  E+       N  TYN  L  +  
Sbjct: 673 WDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLAN 732

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + +A ++L   ++EG   + +TFN +I  +CK G++  AI L+      G + PD I
Sbjct: 733 EGELEKA-KVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESG-FFPDCI 790

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           SY++++  +C  G + +AF    +ML +G+ P+   +N+L+R
Sbjct: 791 SYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 250/528 (47%), Gaps = 42/528 (7%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           + + M+  G++ +   YN+L+  LC+NNRV  A ++   M  +G   D V+Y T+V   C
Sbjct: 217 LLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFC 276

Query: 147 KLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           +  ++E A E     L++ F   V+  + +++GL K   I++AF L C + + G+ PN+ 
Sbjct: 277 RTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLF 336

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
             + +I  LC       +  +   M  RG  PN  ++  L+      G   +A  +++RM
Sbjct: 337 ACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRM 396

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G    V  Y++LI+G C + +  +A  +  +M E    P+  +YS LI G  + G+L
Sbjct: 397 REKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDL 456

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++   M  NG S NV  +T ++   C++    +A  L +KM   +  PN VTFN  
Sbjct: 457 ASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVM 516

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I+G C  G V  A +L DQM      P+  TY  L+  L       +A E V ++E   +
Sbjct: 517 IEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCV 576

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK--------- 492
            LN  +  T+++G C+ G + E + +  +M   G KLD I+F +I+YA  K         
Sbjct: 577 VLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISV 636

Query: 493 -----------------------QGKVNNAIQLL---DRIRGGGEWNPDIISYTSLLWGI 526
                                    K  N +Q L   D++   G  +P++++YT L+  +
Sbjct: 637 LFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADG-CSPNVVTYTVLINHL 695

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           C SG +  A I  ++ML     PN  T+N  +    +N G L    +L
Sbjct: 696 CKSGYLSSAQILCEEMLVGRFLPNSFTYNCFL-DFLANEGELEKAKVL 742



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 219/443 (49%), Gaps = 6/443 (1%)

Query: 143 SSICKLGQVEEARE-LAMRFGSGVSV--YNA--LINGLCKEHKIEEAFWLLCEMVDRGID 197
           SS  +L +  +A + L +   SG+++  Y A  ++  L K  +   A  L  EMV     
Sbjct: 133 SSYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFP 192

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
            +   Y+  I + C++ N++ + G+L +M  +G   +   +  L+ G     R  EA ++
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            N M+  G + + V Y TL++G C    ++ A+ ++  M      P+V + S ++DG  K
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G++  A ++   +   G  PN+ A   ++  LC++  F +A  L   MA     PN VT
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVT 372

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +   I  LC  G +D A+ + D+M++      +  YN L++G  + +   +A  L+ E+ 
Sbjct: 373 YAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV 432

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G+  +  +Y+ ++ G+CR G +  A +L  +M   G   +  TF  +I  +CK G ++
Sbjct: 433 EKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A +L D++       P+ +++  ++ G C  G +++AF    +M++ G+ P+  T+  L
Sbjct: 493 EAARLFDKMIDSSVV-PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSL 551

Query: 558 VRSLFSNLGHLGPVYILDDIMAN 580
           +  L   LG +     +DD+  N
Sbjct: 552 ISVLCLTLGAMKAKEFVDDLENN 574



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 216/458 (47%), Gaps = 8/458 (1%)

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
           + G A    + + I+ ++ K+ Q   AR+L       +F     VY A I   C+   ++
Sbjct: 153 SSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLD 212

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  LL  M  +G+  + + Y+ ++  LC    V  ++ +   M  RG   +  ++ +L+
Sbjct: 213 GARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLV 272

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+        A ++ + M+   F+P+V + S ++ GL   G +D+A  ++  + E    
Sbjct: 273 YGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMV 332

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN+   +ALID   K      A +++  M + G  PN V Y  ++  LC+  M   A  +
Sbjct: 333 PNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCM 392

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            ++M  +        +N+ I G C       A  LL++M +    P+  +Y+ L+ GL R
Sbjct: 393 FDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCR 452

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              +  A EL  E+ + G+  N+ T+ T++ G C+ G + EA +L  KM+      + +T
Sbjct: 453 KGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVT 512

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           FN++I  YC+ G V  A QL D++   G   PD  +Y SL+  +C + G  +A  ++  +
Sbjct: 513 FNVMIEGYCRVGNVRKAFQLYDQMVDRG-LTPDNYTYRSLISVLCLTLGAMKAKEFVDDL 571

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVY-ILDDIMA 579
            N  +  N  +   L+   F   G L   Y I D++ A
Sbjct: 572 ENNCVVLNSFSLTTLMYG-FCKEGRLTETYHIWDEMRA 608



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 201/457 (43%), Gaps = 74/457 (16%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  +D    +  +M+ +G+  +   + S+IN Y +     QA  +   + E G
Sbjct: 376 LIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKG 435

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P+   Y+ ++  L  +   +    ++  M R+G+  NV+T+  L+   CK+  +D A 
Sbjct: 436 LAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAA 495

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----------------------- 157
           +L  +M +    P+ V++  ++   C++G V +A +L                       
Sbjct: 496 RLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVL 555

Query: 158 -----AMRFGSGVS-------VYNA-----LINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                AM+    V        V N+     L+ G CKE ++ E + +  EM  RG+  ++
Sbjct: 556 CLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDL 615

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           I+++ I+ +   + + E    +  +M  +G  P+    T ++  +       +A + W++
Sbjct: 616 ISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDK 675

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAV--------------SVSY-----------Q 295
           MI +G  PNVV Y+ LI+ LC +G +  A               S +Y           +
Sbjct: 676 MIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGE 735

Query: 296 MEE---------NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +E+           C  N  T++ LI GF KAG + GA  +      +G  P+ ++Y+ +
Sbjct: 736 LEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTI 795

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           +  LC+    ++A  L  +M ++   P+ V +N  I+
Sbjct: 796 INELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 4/251 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           ++  +M+  GV      F  ++ +  ++   E+   +F  ++E G+KP    +  ++D  
Sbjct: 601 HIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVH 660

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             E         +  M  DG  PNV TY +L+  LCK+  +  A  L  EM      P++
Sbjct: 661 SKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS 720

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEM 191
            +Y   +  +   G++E+A+ L      G       +N LI G CK  +I+ A  L+   
Sbjct: 721 FTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G  P+ I+YSTII+ LC VG++  +  +  +M  +G  P+I ++  L++   + G  
Sbjct: 781 TESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEF 840

Query: 252 HEASDLWNRMI 262
            +   +++ M+
Sbjct: 841 DKGLGIYSDMV 851


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 236/457 (51%), Gaps = 9/457 (1%)

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVSV- 167
           L +N  ++   + L  M NKG  PD V+ T ++   CK+G+ + A R + +   SG  + 
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 168 ---YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN LIN  CK  +IEEA  +L       + PN  TY  ++ SLCD G ++ ++ +L 
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +     C P++ + T L+          +A  L+N M  +G  P+VV Y+ LI G C  G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +DEA+    ++    C  +V +++ ++      G  + A ++   M+  GC P+VV + 
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++  LCQ  +  +A +++E M      PN+ +FN  I+G C    +D A++ L+ M   
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C P+I TYN LL  L +  +V +A  +++++   G   ++++YNT++ G+ + G    A
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +LL +M  +G K D IT   ++    ++GKV+ AI+    ++G G   P+   Y S++ 
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFG-IKPNAFIYNSIMM 494

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G+C +     A  +L  M+  G  P  A++  L++ +
Sbjct: 495 GLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGI 531



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 236/485 (48%), Gaps = 8/485 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+  +    +   G  P V     ++       R      I   ++  G   +  
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RE 156
           +YN+L+ A CK+  ++ A ++L    +   AP+A +Y  ++ S+C  G++++A     R+
Sbjct: 141 SYNVLINAYCKSGEIEEALRVL---DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L  +    V     LI+  CKE  + +A  L  EM  +G  P+V+TY+ +I   C  G +
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L ++   GC  ++ S   +L+    GGR  +A  L   M+R+G  P+VV ++ L
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+ LC  G + +A++V   M ++   PN  +++ LI GF     +  A +    M+S GC
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGC 377

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y  ++  LC++     A  ++ +++ + C P+ +++NT I GL   G+ + A++
Sbjct: 378 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 437

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL++M      P++ T   ++ GL R  +V EA +    ++  GI+ N   YN+I+ G+C
Sbjct: 438 LLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLC 497

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +A     A   L  M+  G K    ++  +I     +G    A +L + +   G     +
Sbjct: 498 KAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSL 557

Query: 517 ISYTS 521
           I   S
Sbjct: 558 IVKVS 562



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 194/411 (47%), Gaps = 8/411 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN+Y + G  E+AL++   +    + P    Y+ +L +L    +      +     +  
Sbjct: 145 LINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSK 201

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P+V T  +L+ A CK + V  A KL  EM  KGC PD V+Y  ++   CK G+++EA 
Sbjct: 202 CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAI 261

Query: 156 ELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
               +       S V  +N ++  LC   +  +A  LL  M+ +G  P+V+T++ +I+ L
Sbjct: 262 IFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFL 321

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G +  +L +L  M   G  PN  SF  L++G+        A +    M+  G  P++
Sbjct: 322 CQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDI 381

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ L+  LC +G +D+AV +  Q+    C P++ +Y+ +IDG  K G    A ++   
Sbjct: 382 VTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEE 441

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  P+++  T +V  L +    H+A      +      PN   +N+ + GLC   +
Sbjct: 442 MCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQ 501

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
              A+  L  M    C P   +Y  L+ G+      +EA +L  E+   G+
Sbjct: 502 TSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 198/398 (49%), Gaps = 5/398 (1%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C+   ++  L+ +    V+ +   + +V+ S    G  +QA+++  R  +    P V   
Sbjct: 150 CKSGEIEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTC 209

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++DA   E+       +++ M+  G +P+V TYN+L+K  CK  R+D A   L ++ +
Sbjct: 210 TVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPS 269

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGLCKEHKIEE 183
            GC  D +S+  I+ S+C  G+  +A +L    +R G   SV  +N LIN LC++  + +
Sbjct: 270 YGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGK 329

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  +L  M   G  PN  +++ +I   C+   ++ ++  L  M  RGC P+I ++  LL 
Sbjct: 330 ALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLT 389

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                G+  +A  + +++  +G  P++++Y+T+I GL   G  + AV +  +M      P
Sbjct: 390 ALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 449

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ T ++++ G ++ G +  A + ++ +   G  PN   Y  ++  LC+      A   +
Sbjct: 450 DLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFL 509

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             M    C P   ++ T IKG+   G  + A KL +++
Sbjct: 510 VDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 147/293 (50%), Gaps = 7/293 (2%)

Query: 277 IHGLCS---NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           IH LC    NG ++E       M      P+V   +ALI  F K G    A++I   +  
Sbjct: 73  IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G   +  +Y  ++   C++    +A  +++  +     PN  T++  +  LC  G++  
Sbjct: 133 SGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSV---APNAATYDAVLCSLCDRGKLKQ 189

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM++LD+  Q +C P++ T   L+D   + + V +A +L  E+   G + ++VTYN ++ 
Sbjct: 190 AMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIK 249

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C+ G + EA   L K+   G + D I+ N+I+ + C  G+  +A++LL  +   G + 
Sbjct: 250 GFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCF- 308

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           P ++++  L+  +C  G + +A   L+ M   G  PN  ++N L++   +  G
Sbjct: 309 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKG 361



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 11/261 (4%)

Query: 18  LQQMKVEGVSCSEGVFISV------INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +  MK+      +G F SV      IN   + GL  +AL +   + + G  P  + +N +
Sbjct: 293 MDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPL 352

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +                  M   G  P++ TYNILL ALCK+ +VD A  +L ++ +KGC
Sbjct: 353 IQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGC 412

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFW 186
           +P  +SY T++  + K+G+ E A EL            +    +++ GL +E K+ EA  
Sbjct: 413 SPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIK 472

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
               +   GI PN   Y++I+  LC       ++  L  M   GC P   S+T+L+KG  
Sbjct: 473 FFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGIT 532

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             G   EAS L N +   G +
Sbjct: 533 YEGLAEEASKLSNELYSRGLV 553



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 80/163 (49%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    +L Q+  +G S S   + +VI+   +VG AE A+++   +   GLKP +    
Sbjct: 396 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 455

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E +       +  +K  G++PN F YN ++  LCK  +   A   LV+M   
Sbjct: 456 SVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVAN 515

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALI 172
           GC P   SYTT++  I   G  EEA +L+    S   V  +LI
Sbjct: 516 GCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLI 558


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/561 (27%), Positives = 270/561 (48%), Gaps = 11/561 (1%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL-KPTVKIYNHILDALLAENR 80
           + +GV  SE      I ++ R G  + A+ M   +R     +P    +   +  L    R
Sbjct: 45  RQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRR 104

Query: 81  FSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSY 138
                 ++ +M+      P+V  YN L+   CK    D A  +   +  +G C P+AVS+
Sbjct: 105 VEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSF 164

Query: 139 TTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T+V  +CK+ +  +A       L     + V+V N LI+  C+   + +A  LL  M  
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
                +  TY  ++++ C  G +      +      GC  +  ++  +++G++  GR  E
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAE 284

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A+ L+   + +  +P+V  Y+ LI  LC +  ++EA+++  + E+     +V TYS L+D
Sbjct: 285 ATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMD 343

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
            F KAG    A +++  M   GC P+ V Y  ++  L +     +A  L+E M  +   P
Sbjct: 344 AFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMP 403

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           +  T+N  I  L  CGR + A      MK+ +  P++ TYN LL+GL ++ R  EA +L 
Sbjct: 404 DCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E++      ++ T+ T++  + +AG + +A +   +++  G   ++  +N +I  +C+ 
Sbjct: 464 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRS 523

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G+V+   +L   +     + PD I+YT L+ G    G    A   LQ+M+ EG  P  AT
Sbjct: 524 GQVDKGYELFQDMIECSCF-PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALAT 582

Query: 554 WNVLVRSLFSNLGHLGPVYIL 574
           +NVL+RSL S  G +   Y L
Sbjct: 583 YNVLIRSL-SMAGQVEDAYTL 602



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 231/523 (44%), Gaps = 46/523 (8%)

Query: 9   CEIDGVQY---LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFG-LK 62
           CE+  V+    L   M+ E   C+  V  + ++I  Y + G  ++AL MF R+++ G  K
Sbjct: 100 CEVRRVEQAMTLFDDMR-ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCK 158

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    ++ ++  L   +R +    ++  M   G++ +V   N L+   C+   +  A +L
Sbjct: 159 PNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRL 218

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVSV--YNALING--- 174
           L  M    CA DA +Y  +V++ C+ GQ+ E     ELA   G  +S   YN +I G   
Sbjct: 219 LHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIR 278

Query: 175 -------------------------------LCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
                                          LCK  ++EEA  L  E    G+  +V TY
Sbjct: 279 CGRLAEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTY 338

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           S ++ +    G    +L +   M   GC P+   +  L+      G+  EA +L   M R
Sbjct: 339 SYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR 398

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G +P+   Y+ +I  L S G  ++A S    M+     P+V TY+ L++G  K      
Sbjct: 399 KGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDE 458

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  +++ M +N C P++  +  ++  L +      A     ++      PN+  +N  I 
Sbjct: 459 ACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALIS 518

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  G+VD   +L   M +  C P+  TY  L+ G  R      A EL+ E+ + G   
Sbjct: 519 GFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTP 578

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            + TYN ++  +  AG V +A+ L  +M+ +G   D  T++ +
Sbjct: 579 ALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 7/247 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG++ ++D    LL+ M  +G+      +  VI+     G  E+A   F  ++   
Sbjct: 376 LISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRK 435

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +L+ L    R      ++  M+ +   P++ T+  L+  L K  R++ A 
Sbjct: 436 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL 495

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALING 174
           +    +   G AP++  Y  ++S  C+ GQV++  EL         F   ++ Y  L+ G
Sbjct: 496 EQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSIT-YTILVLG 554

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             +      A  LL EMV  G  P + TY+ +I SL   G VE +  +  +M  +G NP+
Sbjct: 555 FSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPD 614

Query: 235 IHSFTSL 241
           + ++++L
Sbjct: 615 MQTYSAL 621



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 2/189 (1%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           P +  T    +K +C  GR +   +LL +++Q     +  T  E +    R   +  A  
Sbjct: 15  PVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMG 74

Query: 432 LVTEIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE-GTKLDAITFNIIIYA 489
           ++ ++ +    Q + V +   +H +C    V +A  L   M        D + +N +I  
Sbjct: 75  MLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAG 134

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           YCK G  + A+ +  R++  G   P+ +S+ +L+  +C      +A    Q+ML  G+  
Sbjct: 135 YCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKA 194

Query: 550 NFATWNVLV 558
           +    N L+
Sbjct: 195 DVNVCNTLI 203



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 1/122 (0%)

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K G+ ++  T   ++  VC+ G      +LL ++  +G  L  +T    I A+ + G ++
Sbjct: 11  KAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLD 70

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNV 556
            A+ +LD +R G    PD +++T+ +  +C    +++A      M     C P+   +N 
Sbjct: 71  AAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNT 130

Query: 557 LV 558
           L+
Sbjct: 131 LI 132


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 257/511 (50%), Gaps = 8/511 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G    V I N +L  L           +   M R  + P++ +YN L+  LCK  ++  A
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEA 198

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALING 174
             LL+EM   GC P++V+ TT++  +CK G+++EA EL  AM+   F + V +Y  LI+G
Sbjct: 199 VGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISG 258

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C    ++    L  EM+ +GI  NV+TYS ++  LC +G  + +  +L  M   G +P+
Sbjct: 259 FCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 318

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T L+ G    GR   A DL N M+ +G  P+ V Y+ L+ GLC  G + +A  +  
Sbjct: 319 VVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILR 378

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN-GC-SPNVVAYTCMVKVLCQ 352
            M E     +V TY+ L+ G    G +  A +++N M  N  C  PNV  +  ++  LC+
Sbjct: 379 MMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCK 438

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A  +  KM  +    N VT+N  + G    G++  AM+L  Q+     +PN  T
Sbjct: 439 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 498

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+DG  ++  +  A  L  E+   G+   +  YNT++  +C+ G + +A  L  +M 
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
               + D I+FN +I    K G      +L  ++   G   PD +++++L+  +   G +
Sbjct: 559 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG-LRPDALTFSTLINRLSKLGEL 617

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            EA   L++M+  G  P+   ++ L++ L S
Sbjct: 618 DEAKSALERMVASGFTPDALVYDSLLKGLSS 648



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/501 (30%), Positives = 251/501 (50%), Gaps = 11/501 (2%)

Query: 56  IREFGLK---PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           IRE G K   P +  YN +++ L    +      +   M+  G  PN  T   L+  LCK
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----V 167
           + R+D A +LL  M  KG   D V Y T++S  C  G ++  +EL     G G+S     
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y+ L++GLC+  + +EA  +L  M + GI P+V+TY+ +I  LC  G    ++ +L  M 
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +G  P+  ++  LL G    G   +A  +   MI +G   +VV Y+TL+ GLC  G +D
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406

Query: 288 EAVSVSYQM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           EA+ +   M   EN   PNV T++ LI G  K G L  A +I  +M+  G   N+V Y  
Sbjct: 407 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++    +     +A  L +++      PN+ T++  I G C    ++ A  L  +M+ + 
Sbjct: 467 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P +  YN L+  L +   +++A  L  E+     + +I+++NT++ G  +AG      
Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 586

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +L  KM+  G + DA+TF+ +I    K G+++ A   L+R+   G + PD + Y SLL G
Sbjct: 587 ELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG-FTPDALVYDSLLKG 645

Query: 526 ICNSGGMQEAFIYLQKMLNEG 546
           + + G   E    L +M  +G
Sbjct: 646 LSSKGDTTEIINLLHQMAAKG 666



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 264/551 (47%), Gaps = 74/551 (13%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A+ +F+   +F L P+    N ++DAL     + +   +Y  M    + P+        
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSF------- 109

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT---IVSSICKLGQVEEARELAMRFGSG 164
                     G+   L+E     C  DA        +V  + K G           F   
Sbjct: 110 ----------GSLSALIE-----CFADAQKPQLGFGVVGLVLKRG-----------FTVN 143

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V + N ++ GLC+   + EA  L+ EM  + + P++++Y+T+I+ LC    ++ ++G+L 
Sbjct: 144 VFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLL 203

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M   GC PN  + T+L+ G    GR  EA +L   M ++GF  +VV Y TLI G C+NG
Sbjct: 204 EMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 263

Query: 285 SMD-----------------------------------EAVSVSYQMEENSCPPNVTTYS 309
           ++D                                   EA +V   M E+   P+V TY+
Sbjct: 264 NLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYT 323

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LIDG  K G    A  + N M+  G  P+ V Y  ++  LC+  +   A  ++  M  +
Sbjct: 324 GLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK 383

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CL-PNITTYNELLDGLLRVNRVK 427
               + VT+NT +KGLC  G+VD A+KL + M   E CL PN+ T+N L+ GL +  R+ 
Sbjct: 384 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 443

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A ++  ++ K G   N+VTYN +L G  +AG + EA +L  ++L  G   ++ T++I+I
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 503

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             +CK   +N A  L   +R  G  NP +  Y +L+  +C  G +++A    Q+M N   
Sbjct: 504 DGFCKMRMLNIAKGLFCEMRTHG-LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 562

Query: 548 CPNFATWNVLV 558
            P+  ++N ++
Sbjct: 563 EPDIISFNTMI 573



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 260/521 (49%), Gaps = 10/521 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+++M  + VS     + ++IN   +    ++A+ +   +   G  P       ++D L 
Sbjct: 166 LIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLC 225

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R      +   MK+ G + +V  Y  L+   C N  +D   +L  EM  KG + + V
Sbjct: 226 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 285

Query: 137 SYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ +V  +C+LGQ +EA  +  AM        V  Y  LI+GLCK+ +   A  LL  M
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V++G +P+ +TY+ ++S LC  G V  +  IL  M  +G   ++ ++ +L+KG    G+ 
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405

Query: 252 HEASDLWNRMI--REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            EA  L+N M        PNV  ++ LI GLC  G + +AV +  +M +     N+ TY+
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+ G  KAG +  A ++W +++  G  PN   Y+ ++   C+  M + A  L  +M   
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P    +NT +  LC  G ++ A  L  +M    C P+I ++N ++DG L+    +  
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            EL  ++ + G++ + +T++T+++ + + G + EA   L +M+  G   DA+ ++ ++  
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645

Query: 490 YCKQGKVNNAIQLLDRIRGGGE-WNPDIISYTSLLWGICNS 529
              +G     I LL ++   G   +  I+S  ++L  +C+S
Sbjct: 646 LSSKGDTTEIINLLHQMAAKGTVLDRKIVS--TILTCLCHS 684



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 246/494 (49%), Gaps = 7/494 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  G   +     ++++   + G  ++A+++   +++ G    V +Y  ++    
Sbjct: 201 LLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFC 260

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     ++  M   G+  NV TY+ L+  LC+  +   A  +L  M   G  PD V
Sbjct: 261 NNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVV 320

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +CK G+   A +L    +  G   S   YN L++GLCKE  + +AF +L  M
Sbjct: 321 TYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 380

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV-RGC-NPNIHSFTSLLKGYLLGG 249
           +++G   +V+TY+T++  LCD G V+ +L +   MF    C  PN+ +F  L+ G    G
Sbjct: 381 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 440

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A  +  +M+++G   N+V Y+ L+ G    G + EA+ +  Q+ +    PN  TYS
Sbjct: 441 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LIDGF K   L  A  ++  M ++G +P +  Y  ++  LC+     QA SL ++M   
Sbjct: 501 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           NC P+ ++FNT I G    G   +  +L  +M +    P+  T++ L++ L ++  + EA
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
              +  +   G   + + Y+++L G+   G   E   LL +M  +GT LD    + I+  
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTC 680

Query: 490 YCKQGKVNNAIQLL 503
            C   +  + ++LL
Sbjct: 681 LCHSIQEVDVMELL 694



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 228/475 (48%), Gaps = 7/475 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D    LL+ MK +G      ++ ++I+ +   G  ++  ++F  +   G
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  Y+ ++  L    ++   N + + M   G+ P+V TY  L+  LCK+ R   A 
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGL 175
            LL  M  KG  P  V+Y  ++S +CK G V +A + L M    G    V  YN L+ GL
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399

Query: 176 CKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C + K++EA  L   M D    ++PNV T++ +I  LC  G +  ++ I  +M  +G   
Sbjct: 400 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 459

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N+ ++  LL G L  G+  EA +LW +++  GF+PN   YS LI G C    ++ A  + 
Sbjct: 460 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 519

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M  +   P +  Y+ L+    K G+L  A  ++  M +  C P+++++  M+    + 
Sbjct: 520 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 579

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
             F     L  KM      P+ +TF+T I  L   G +D A   L++M      P+   Y
Sbjct: 580 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 639

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           + LL GL       E   L+ ++   G  L+    +TIL  +C +   V+  +LL
Sbjct: 640 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 155/324 (47%), Gaps = 38/324 (11%)

Query: 275 TLIHGLCS--NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM- 331
           T +  LC   N    EAVS+ +   + +  P+  T + L+D  A++ N   A  ++ RM 
Sbjct: 42  TQLRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMT 101

Query: 332 ----------------------------------ISNGCSPNVVAYTCMVKVLCQNNMFH 357
                                             +  G + NV     ++K LC+N    
Sbjct: 102 HVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVF 161

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A  LI +M  ++  P+ V++NT I GLC   ++  A+ LL +M+   C PN  T   L+
Sbjct: 162 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM 221

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL +  R+ EA EL+  ++K G   ++V Y T++ G C  G +    +L  +ML +G  
Sbjct: 222 DGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGIS 281

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T++ +++  C+ G+   A  +L+ +   G  +PD+++YT L+ G+C  G    A  
Sbjct: 282 ANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG-IHPDVVTYTGLIDGLCKDGRATHAMD 340

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
            L  M+ +G  P+  T+NVL+  L
Sbjct: 341 LLNLMVEKGEEPSNVTYNVLLSGL 364



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 4/237 (1%)

Query: 347 VKVLCQ--NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
           ++ LCQ  N+ F +A SL       N  P+  T N  +  L        A  +  +M   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           + LP+  + + L++      + +  F +V  + K G  +N+   N +L G+CR G V EA
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L+ +M  +    D +++N +I   CK  K+  A+ LL  +   G + P+ ++ T+L+ 
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCF-PNSVTCTTLMD 222

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           G+C  G M EA   L+ M  +G   +   +  L+ S F N G+L     L D M  K
Sbjct: 223 GLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI-SGFCNNGNLDRGKELFDEMLGK 278



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 69/168 (41%), Gaps = 4/168 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           ++  L ++  ++  + L Q+M     +C   +  F ++I+   + G  +   ++  ++ E
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMG--NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 594

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            GL+P    ++ +++ L               M   G  P+   Y+ LLK L        
Sbjct: 595 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 654

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
              LL +M  KG   D    +TI++ +C   Q  +  EL   F  G S
Sbjct: 655 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTS 702


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 268/563 (47%), Gaps = 33/563 (5%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + +++ M   GV      F  ++ SY R G    A+++ + +++ G  P + I N  
Sbjct: 144 DPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMA 203

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L+   R          M+R G+EP+V+TYN L+K LC   RV  A +++  M   GC
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAF 185
            PD +SY T++S +CK  +VEE R L  R  +   +      YN LI+GL K    +EA 
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L E   +    + + YS I+ S C  G +  +  I+G+M  +GC P++ ++++++ G+
Sbjct: 324 EFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   +A  +   M +    PN V ++ L++GLC  G   EA  +  + EE    P+ 
Sbjct: 384 CRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSD 443

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS ++ GF + G L  +  +  +M+  G  P  V    ++  LC++    +A   +E+
Sbjct: 444 ITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQ 503

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              + C  N V F T I G    G ++ A+ L+D M      P++ TY  ++D L +  R
Sbjct: 504 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGR 563

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +KEA  LV ++   G+    VTY T++H  C  G + +   LL KML       A  +N 
Sbjct: 564 LKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSA--YNQ 621

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA---FIYLQKM 542
           ++   C  GK+N A                     SLL+ I  +  +++A    I ++  
Sbjct: 622 VVEKLCAFGKLNEAY--------------------SLLYKILRTASVRDAQTCHILMESF 661

Query: 543 LNEGICPNFATWNVLVRSLFSNL 565
           LN G+      +NV  R    NL
Sbjct: 662 LNRGL--GLQAYNVACRMFRRNL 682



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 243/517 (47%), Gaps = 33/517 (6%)

Query: 44  GLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           G   +A + F +  R++  +   ++++ +L  L           +   M R G+      
Sbjct: 105 GDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQ 164

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           +  L+ +  +  ++  A ++L  M   GCAPD                            
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPD---------------------------- 196

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +S+ N  +N L    ++++A      M   G++P+V TY+ +I  LC    V  ++ +
Sbjct: 197 --ISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEM 254

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLC 281
           +G M   GC P+  S+ +++       R  E   L  RM  + G  P+ V Y+ LIHGL 
Sbjct: 255 IGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLA 314

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
            +G  DEA+    + E      +   YSA++  F   G +  A +I   MIS GC P+VV
Sbjct: 315 KHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVV 374

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ +V   C+     QA  +++ M   +C PNTVT    + GLC  G+   A +LL++ 
Sbjct: 375 TYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKS 434

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           ++    P+  TY+ ++ G  R  ++KE+ ++V ++ + G     V  N ++H +C+    
Sbjct: 435 EEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKP 494

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA   + +   +G  ++ + F  +I+ + +QG + +A+ L+D +      +PD+++YT 
Sbjct: 495 AEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNR-HPDVVTYTV 553

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++  +   G ++EA   ++KMLN G+ P   T+  ++
Sbjct: 554 VVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 176/360 (48%), Gaps = 2/360 (0%)

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           +  ++S L +    + +  ++  M  RG       F  L+  Y   G+   A  + + M 
Sbjct: 130 FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQ 189

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G  P++   +  ++ L   G +D+A+  + +M      P+V TY+ LI G   A  ++
Sbjct: 190 KDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVV 249

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTF 381
            A ++   M+ NGC P+ ++Y  ++  LC+     +   L+++M  +    P+ VT+N  
Sbjct: 250 DAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVL 309

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GL   G  D A++ L + +      +   Y+ ++       R+ EA E+V E+   G 
Sbjct: 310 IHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGC 369

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           Q ++VTY+T++ G CR G + +A +++  M     K + +T   ++   CK GK + A +
Sbjct: 370 QPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWE 429

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL++      W P  I+Y+ ++ G    G ++E+   + +ML +G  P     N+L+ +L
Sbjct: 430 LLNKSEEEW-WTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHAL 488



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 175/413 (42%), Gaps = 90/413 (21%)

Query: 10  EIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMF-------YRIREFGL 61
            ++ V+ LLQ+M+ + G+   +  +  +I+   + G A++AL+         +R+ E G 
Sbjct: 282 RVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVG- 340

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
                 Y+ I+ +     R +    I   M   G +P+V TY+ ++   C+   +D A K
Sbjct: 341 ------YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARK 394

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--------------------- 160
           ++  M    C P+ V++T +++ +CK+G+  EA EL  +                     
Sbjct: 395 MMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFR 454

Query: 161 --------------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                               F + V + N LI+ LCK+ K  EA   + +   +G   NV
Sbjct: 455 REGKLKESCDVVVQMLQKGFFPTTVEI-NLLIHALCKDRKPAEAKDFMEQCQSKGCTINV 513

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + ++T+I      G++E++L ++  M++   +P++ ++T ++      GR  EA+ L  +
Sbjct: 514 VNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEK 573

Query: 261 MIREGFLPNVVAYSTLIH---------------------------------GLCSNGSMD 287
           M+  G LP  V Y T+IH                                  LC+ G ++
Sbjct: 574 MLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLN 633

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           EA S+ Y++   +   +  T   L++ F   G  L A  +  RM      P+V
Sbjct: 634 EAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 686


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 258/557 (46%), Gaps = 79/557 (14%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L   +  G+  S   F +++ ++   G    A++ F R+ EF  +PT             
Sbjct: 125 LADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTA------------ 172

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                                  F YN +LKAL  +  +  A  L   M   GCAP+  +
Sbjct: 173 -----------------------FVYNTILKALVDSGVILLALALYNRMVAAGCAPNRAT 209

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           Y                              N L++GLCK+    +A  +  EM+DRGI 
Sbjct: 210 Y------------------------------NVLMDGLCKQGMAGDALKMFDEMLDRGIM 239

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           PNV  Y+ ++SSLC+ G ++ ++ +LG M  +GC P+  ++ + L G    GR +EA   
Sbjct: 240 PNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQR 299

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              +   GF   +  YS LI GL      DE       M E +  P+V  Y+ +I G A+
Sbjct: 300 LVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAE 359

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           AG +  A    + M   G  P+   Y  ++KVLC +    +AH+L  +M   N   ++ T
Sbjct: 360 AGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
               I GLC  G VD AM++ D+M ++ C P + TYN L+DG  R  R++EA  L  ++E
Sbjct: 420 QTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKME 479

Query: 438 ---------KCGIQLNIV----TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
                    +  +  N V    +   ++H +C++G V++A++LL  ++  G   D +T+N
Sbjct: 480 MGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYN 539

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I   CK   ++ A++L   ++  G  +PD I+Y +L+ G+  +    +A +  Q +L 
Sbjct: 540 TLINGLCKARNLDGAVRLFKELQLKG-ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598

Query: 545 EGICPNFATWNVLVRSL 561
            G  P+ + +N ++RSL
Sbjct: 599 SGSSPSLSIYNSMMRSL 615



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 252/550 (45%), Gaps = 55/550 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G + +   +  +++   + G+A  ALKMF  + + G+ P VKIY  +L +L 
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +  +MK  G  P+  TYN  L  LCK  RV+ A++ LV + + G      
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG------ 307

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
                                   F  G+  Y+ LI+GL +  + +E F     M++R I
Sbjct: 308 ------------------------FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNI 343

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+V+ Y+ +I    + G +E +L  L  M  +G  P+   + ++LK     G    A  
Sbjct: 344 SPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHT 403

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L + M++   + +    + +I GLC  G +DEA+ +  +M E+ C P V TY+ALIDGF 
Sbjct: 404 LRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFY 463

Query: 317 KAGNLLGASQIWNRMISNGCSPNVV--------------AYTCMVKVLCQNNMFHQAHSL 362
           + G L  A  ++++M   G +P++               +   +V  +CQ+    +A+ L
Sbjct: 464 REGRLEEARMLFHKM-EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKL 522

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +  +      P+ VT+NT I GLC    +D A++L  +++     P+  TY  L+DGLLR
Sbjct: 523 LRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLR 582

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            +R  +A  L   I + G   ++  YN+++  +CR   + +A  L    L +      + 
Sbjct: 583 AHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNF-PVE 641

Query: 483 FNIIIYAY--CKQGKVNNAIQLL---DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
             ++  A+   + G +++ ++ L   D+  G    NP    YT  L G+C      +A  
Sbjct: 642 SEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNP----YTIWLIGLCQVRRTDDALR 697

Query: 538 YLQKMLNEGI 547
               +   GI
Sbjct: 698 IFHTLQEFGI 707



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 213/481 (44%), Gaps = 31/481 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L    +ID    LL  MK +G    E  + + ++   +VG   +A +    +++ G
Sbjct: 248 LLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGG 307

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +K Y+ ++D L    RF      Y  M    + P+V  Y I+++   +  R++ A 
Sbjct: 308 FALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDAL 367

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----LINGL 175
             L  M  KG  PD   Y T++  +C  G +E A  L         V ++     +I GL
Sbjct: 368 SFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGL 427

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   ++EA  +  EM + G DP V+TY+ +I      G +E +  +  +M + G NP++
Sbjct: 428 CKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEM-GNNPSL 486

Query: 236 --------------HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
                          S   L+      G+  +A  L   +I  G +P+VV Y+TLI+GLC
Sbjct: 487 FLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLC 546

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
              ++D AV +  +++     P+  TY  LIDG  +A     A  ++  ++ +G SP++ 
Sbjct: 547 KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLS 606

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC------GRVDWAM 395
            Y  M++ LC+     QA +L     + +  P    F    + L         G +D  +
Sbjct: 607 IYNSMMRSLCRMKKLSQAINL-----WLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGV 661

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           + L ++ Q     +   Y   L GL +V R  +A  +   +++ GI +       +++ +
Sbjct: 662 RELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYL 721

Query: 456 C 456
           C
Sbjct: 722 C 722



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 40/384 (10%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R +  + ++    +SS  D    E     L      G   +  +F +L+  +   GR  +
Sbjct: 100 RPLHAHAVSLLLRLSSHAD----EAMFDALADARAAGLPASSSAFAALVAAHSSAGRNAD 155

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A   ++RM      P    Y+T++  L  +G +  A+++  +M    C PN  TY+ L+D
Sbjct: 156 AVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMD 215

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  K G    A ++++ M+  G  PNV  YT ++  LC      +A  L+  M  + C P
Sbjct: 216 GLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLP 275

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQ---------MKQYECL----------------- 407
           + VT+N F+ GLC  GRV+ A + L           +K Y CL                 
Sbjct: 276 DEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYY 335

Query: 408 ---------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
                    P++  Y  ++ G     R+++A   +  ++K G   +   YNT+L  +C  
Sbjct: 336 KTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDH 395

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G +  A  L  +ML     LD+ T  I+I   CK+G V+ A+Q+ D + G    +P +++
Sbjct: 396 GDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEM-GEHGCDPTVMT 454

Query: 519 YTSLLWGICNSGGMQEAFIYLQKM 542
           Y +L+ G    G ++EA +   KM
Sbjct: 455 YNALIDGFYREGRLEEARMLFHKM 478



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 1/191 (0%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           P ++  F   +      GR   A++   +M +++  P    YN +L  L+    +  A  
Sbjct: 134 PASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L   +   G   N  TYN ++ G+C+ GM  +A ++  +ML  G   +   + +++ + C
Sbjct: 194 LYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLC 253

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             GK++ A+QLL  ++  G   PD ++Y + L G+C  G + EAF  L  + + G     
Sbjct: 254 NAGKIDEAVQLLGSMKDKGCL-PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 552 ATWNVLVRSLF 562
             ++ L+  LF
Sbjct: 313 KGYSCLIDGLF 323



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 42/237 (17%), Positives = 92/237 (38%), Gaps = 41/237 (17%)

Query: 28  CSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
           C       +++   + G   +A K+   I + G+ P V  YN +++ L           +
Sbjct: 498 CDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRL 557

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           +  ++  G+ P+  TY  L+  L + +R + A  L   +   G +P    Y +++ S+C+
Sbjct: 558 FKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCR 617

Query: 148 LGQVEEARELAMRF--------------------------GSGV---------------S 166
           + ++ +A  L + +                            GV               +
Sbjct: 618 MKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN 677

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            Y   + GLC+  + ++A  +   + + GID      + +I+ LC   N+  ++ I+
Sbjct: 678 PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 268/563 (47%), Gaps = 33/563 (5%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + +++ M   GV      F  ++ SY R G    A+++ + +++ G  P + I N  
Sbjct: 144 DPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMA 203

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L+   R          M+R G+EP+V+TYN L+K LC   RV  A +++  M   GC
Sbjct: 204 VNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGC 263

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAF 185
            PD +SY T++S +CK  +VEE R L  R  +   +      YN LI+GL K    +EA 
Sbjct: 264 PPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEAL 323

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L E   +    + + YS I+ S C  G +  +  I+G+M  +GC P++ ++++++ G+
Sbjct: 324 EFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGF 383

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   +A  +   M +    PN V ++ L++GLC  G   EA  +  + EE    P+ 
Sbjct: 384 CRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSD 443

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS ++ GF + G L  +  +  +M+  G  P  V    ++  LC++    +A   +E+
Sbjct: 444 ITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQ 503

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              + C  N V F T I G    G ++ A+ L+D M      P++ TY  ++D L +  R
Sbjct: 504 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGR 563

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +KEA  LV ++   G+    VTY T++H  C  G + +   LL KML       A  +N 
Sbjct: 564 LKEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSA--YNQ 621

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA---FIYLQKM 542
           ++   C  GK+N A                     SLL+ I  +  +++A    I ++  
Sbjct: 622 VVEKLCAFGKLNEAY--------------------SLLYKILRTASVRDAQTCHILMESF 661

Query: 543 LNEGICPNFATWNVLVRSLFSNL 565
           LN G+      +NV  R    NL
Sbjct: 662 LNRGL--GLQAYNVACRMFRRNL 682



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/517 (24%), Positives = 243/517 (47%), Gaps = 33/517 (6%)

Query: 44  GLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           G   +A + F +  R++  +   ++++ +L  L           +   M R G+      
Sbjct: 105 GDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQ 164

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           +  L+ +  +  ++  A ++L  M   GCAPD                            
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPD---------------------------- 196

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +S+ N  +N L    ++++A      M   G++P+V TY+ +I  LC    V  ++ +
Sbjct: 197 --ISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEM 254

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLC 281
           +G M   GC P+  S+ +++       R  E   L  RM  + G  P+ V Y+ LIHGL 
Sbjct: 255 IGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLA 314

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
            +G  DEA+    + E      +   YSA++  F   G +  A +I   MIS GC P+VV
Sbjct: 315 KHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVV 374

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y+ +V   C+     QA  +++ M   +C PNTVT    + GLC  G+   A +LL++ 
Sbjct: 375 TYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKS 434

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           ++    P+  TY+ ++ G  R  ++KE+ ++V ++ + G     V  N ++H +C+    
Sbjct: 435 EEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKP 494

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA   + +   +G  ++ + F  +I+ + +QG + +A+ L+D +      +PD+++YT 
Sbjct: 495 AEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNR-HPDVVTYTV 553

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++  +   G ++EA   ++KMLN G+ P   T+  ++
Sbjct: 554 VVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 176/360 (48%), Gaps = 2/360 (0%)

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           +  ++S L +    + +  ++  M  RG       F  L+  Y   G+   A  + + M 
Sbjct: 130 FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQ 189

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           ++G  P++   +  ++ L   G +D+A+  + +M      P+V TY+ LI G   A  ++
Sbjct: 190 KDGCAPDISICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVV 249

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTF 381
            A ++   M+ NGC P+ ++Y  ++  LC+     +   L+++M  +    P+ VT+N  
Sbjct: 250 DAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVL 309

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I GL   G  D A++ L + +      +   Y+ ++       R+ EA E+V E+   G 
Sbjct: 310 IHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGC 369

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           Q ++VTY+T++ G CR G + +A +++  M     K + +T   ++   CK GK + A +
Sbjct: 370 QPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWE 429

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL++      W P  I+Y+ ++ G    G ++E+   + +ML +G  P     N+L+ +L
Sbjct: 430 LLNKSEEEW-WTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHAL 488



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 175/413 (42%), Gaps = 90/413 (21%)

Query: 10  EIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMF-------YRIREFGL 61
            ++ V+ LLQ+M+ + G+   +  +  +I+   + G A++AL+         +R+ E G 
Sbjct: 282 RVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVG- 340

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
                 Y+ I+ +     R +    I   M   G +P+V TY+ ++   C+   +D A K
Sbjct: 341 ------YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARK 394

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--------------------- 160
           ++  M    C P+ V++T +++ +CK+G+  EA EL  +                     
Sbjct: 395 MMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFR 454

Query: 161 --------------------FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
                               F + V + N LI+ LCK+ K  EA   + +   +G   NV
Sbjct: 455 REGKLKESCDVVVQMLQKGFFPTTVEI-NLLIHALCKDRKPAEAKDFMEQCQSKGCTINV 513

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + ++T+I      G++E++L ++  M++   +P++ ++T ++      GR  EA+ L  +
Sbjct: 514 VNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEK 573

Query: 261 MIREGFLPNVVAYSTLIH---------------------------------GLCSNGSMD 287
           M+  G LP  V Y T+IH                                  LC+ G ++
Sbjct: 574 MLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVEKLCAFGKLN 633

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           EA S+ Y++   +   +  T   L++ F   G  L A  +  RM      P+V
Sbjct: 634 EAYSLLYKILRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDV 686


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/589 (25%), Positives = 279/589 (47%), Gaps = 70/589 (11%)

Query: 42  RVGLAEQALKMFYRIRE-FGLK-PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           + G   +A+  F  +R  F  K P++ +YN +L + + ENR  +++ +Y +M    + P 
Sbjct: 87  KSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPE 146

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-- 157
            +T+N+L+  LC +  ++ A +L  +M  +GC P+  ++  +V   C+ G   +  EL  
Sbjct: 147 AYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLG 206

Query: 158 ---AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
               M       +YN LI+  CKE K  +A  L+ +M + G+ P+V T+++ IS+LC  G
Sbjct: 207 QMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSG 266

Query: 215 NVETSLGILGQMFVRG----CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE------ 264
            +  +  I   M +       +PN+ ++  +L G+   G   EA  L + M R       
Sbjct: 267 KILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINL 326

Query: 265 -----------------------------GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                                        G  P++ +Y+ ++ GLC NG + +A  +   
Sbjct: 327 ESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGL 386

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N   P+  TYS L+ G+   G +  A+ + + MISN CSPN      ++  L +   
Sbjct: 387 MIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGR 446

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL----------------- 398
             +A +L++KM  +    +TVT N  I  LC  G++D A++++                 
Sbjct: 447 ISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNS 506

Query: 399 ------DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                 D +   +C P++ TY+ ++ GL +  R+ +A +   E+   G+Q +   Y+T +
Sbjct: 507 FIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFI 566

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           H  CR G +  AFQ+L  M   G      T+N +I     + ++     L+D +R  G  
Sbjct: 567 HSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKG-V 625

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +PD+ +Y  +L  +C  G + +A   L +ML +GI PN +++ +L+++ 
Sbjct: 626 SPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 260/524 (49%), Gaps = 32/524 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   ++  + L  +M   G   +E  F  ++  Y R GLA + L++  ++R  G
Sbjct: 153 LIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMG 212

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   +YN ++ +   E +      +   M+ DG+ P+V T+N  + ALC + ++  A 
Sbjct: 213 ILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEAS 272

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSG---VSVYNAL 171
           ++  +M          P+ ++Y  ++   CK G +EEA+ L   M+  +    +  YN  
Sbjct: 273 RIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIW 332

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + GL +  K+ EA+ +L EM+  GI+P++ +Y+ ++  LC  G +  +  ++G M   G 
Sbjct: 333 LLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGI 392

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+  ++++LL GY   G+  EA++L + MI     PN    + L+H L   G + EA +
Sbjct: 393 LPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAEN 452

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG---------------- 335
           +  +M E     +  T + +I+     G L  A +I N M ++G                
Sbjct: 453 LLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVD 512

Query: 336 -------CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
                  C+P++V Y+ ++  LC+      A     +M  +   P++  ++TFI   C  
Sbjct: 513 DTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCRE 572

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G++  A ++L  M++  C   + TYN L+ GL   N++ E + L+ E+ + G+  ++ TY
Sbjct: 573 GKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTY 632

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           N +L+ +C  G + +A  +L +ML +G   +  +F I+I A+CK
Sbjct: 633 NHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCK 676



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 202/440 (45%), Gaps = 29/440 (6%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+EP++++YNI++  LCKN  +  A  L+  M   G  PD V+Y+T++   C  G+V EA
Sbjct: 356 GIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEA 415

Query: 155 RELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L     S          N L++ L KE +I EA  LL +M ++G   + +T + II++
Sbjct: 416 NNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINA 475

Query: 210 LCDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLKGYL 246
           LC+ G ++ ++ I+  M+  G                       C P++ ++++++ G  
Sbjct: 476 LCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLC 535

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  +A   +  M+ +G  P+   Y T IH  C  G +  A  V   ME+  C   + 
Sbjct: 536 KAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQ 595

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY++LI G      +     + + M   G SP+V  Y  M+  LC+    + A S++++M
Sbjct: 596 TYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM 655

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   PN  +F   IK  C       + ++  ++    C      Y  + + LL   +V
Sbjct: 656 LQKGISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFNELLVGGKV 714

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA EL          +    Y  ++  +C+   +  A  +L +++ +G + D  +F  +
Sbjct: 715 AEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPV 774

Query: 487 IYAYCKQGKVNNAIQLLDRI 506
           I  + K G  + A +L +R+
Sbjct: 775 IDGFGKMGNKHVADELAERM 794



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 189/422 (44%), Gaps = 34/422 (8%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           L++  + M   IR  G+ P    Y+ +L    ++ +    N +   M  +   PN +T N
Sbjct: 377 LSDARMLMGLMIRN-GILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCN 435

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---MRF 161
           +LL +L K  R+  A  LL +M  KG   D V+   I++++C  GQ+++A E+       
Sbjct: 436 VLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTH 495

Query: 162 GSG-------------------------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           GS                          +  Y+ +I+GLCK  ++++A     EM+ +G+
Sbjct: 496 GSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGL 555

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+   Y T I S C  G + ++  +L  M  RGCN  + ++ SL+ G     +  E   
Sbjct: 556 QPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYG 615

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L + M  +G  P+V  Y+ +++ LC  G +++A SV  +M +    PN++++  LI  F 
Sbjct: 616 LIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFC 675

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           KA +   + +++  +  N C      YT M   L       +A  L E     +      
Sbjct: 676 KACDFKASHEVF-EIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNF 734

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            +   I  LC   +++ A  +L ++  K Y+  P   ++  ++DG  ++     A EL  
Sbjct: 735 LYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDP--ASFMPVIDGFGKMGNKHVADELAE 792

Query: 435 EI 436
            +
Sbjct: 793 RM 794



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 4/267 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D  +    +M  +G+     ++ + I+S+ R G    A ++   + + G
Sbjct: 530 IISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRG 589

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              T++ YN ++  L ++N+   +  +   M+  G+ P+V TYN +L  LC+  R++ A 
Sbjct: 590 CNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAP 649

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICK---LGQVEEARELAMRF-GSGVSVYNALINGLC 176
            +L EM  KG +P+  S+  ++ + CK        E  E+A+   G   ++Y  + N L 
Sbjct: 650 SVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELL 709

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              K+ EA  L    +DR  D     Y  +I  LC    +E +  +L ++  +G   +  
Sbjct: 710 VGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPA 769

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIR 263
           SF  ++ G+   G  H A +L  RM+ 
Sbjct: 770 SFMPVIDGFGKMGNKHVADELAERMME 796



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 8/239 (3%)

Query: 346 MVKVLCQNNMFHQAHSLIEKMA--FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           +V VL ++  F++A S  + +   F    P+   +N  +K      RV+    L   M  
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P   T+N L+  L     +++A EL  ++   G + N  T+  ++ G CRAG+  +
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             +LLG+M   G   + + +N +I ++CK+GK ++A +L+D++R  G   P + ++ S +
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDG-LVPHVETFNSRI 259

Query: 524 WGICNSGGMQEAF-IYLQKMLNEGI---CPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
             +C SG + EA  I+    ++E +    PN  T+ +++   F   G L     L D M
Sbjct: 260 SALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMG-FCKEGMLEEAKTLVDTM 317


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 271/528 (51%), Gaps = 11/528 (2%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           Y +  +AE+ L  F ++   G  P+V+  N +L  L      +  + +Y  M   G+ P 
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA- 158
           V T+N +L +  K   ++   K+ +EM  +      V+Y  +++   K G++EEAR    
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297

Query: 159 --MRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              R G  V+ Y  N LI G CK+   ++A+ +  EM++ GI P   TY+  I +LCD G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ +  +L  M      P++ S+ +L+ GY+  G+  EAS L++ +      P++V Y+
Sbjct: 358 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 413

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI GLC +G+++ A  +  +M      P+V TY+ L+ GF K GNL  A+++++ M+  
Sbjct: 414 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 473

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDW 393
           G  P+  AYT       +     +A  L E+M A ++  P+   +N  I GLC  G +  
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++   ++ +   +P+  TY  ++ G L   + K A  L  E+ +  +  +++TY  +++
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G  +AG + +AFQ   +M   G + + +T N ++Y  CK G ++ A + L ++   G   
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IP 652

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  SYT L+   C+    +E     ++ML++ I P+  T   L + L
Sbjct: 653 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 250/490 (51%), Gaps = 3/490 (0%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           + M   G+  +   F ++++S  + G  E+  K++  ++   ++ +   YN +++     
Sbjct: 227 ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKN 286

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +       + +M+R G     +++N L++  CK    D A+ +  EM N G  P   +Y
Sbjct: 287 GKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTY 346

Query: 139 TTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
              + ++C  G++++AREL     +  V  YN L++G  K  K  EA  L  ++    I 
Sbjct: 347 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 406

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+++TY+T+I  LC+ GN+E +  +  +M  +   P++ ++T+L+KG++  G    A+++
Sbjct: 407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 466

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFA 316
           ++ M+R+G  P+  AY+T   G    G  D+A  +  +M   +   P++T Y+  IDG  
Sbjct: 467 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 526

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K GNL+ A +   ++   G  P+ V YT +++   +N  F  A +L ++M  +   P+ +
Sbjct: 527 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+   I G    GR++ A +   +MK+    PN+ T+N LL G+ +   + EA+  + ++
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           E+ GI  N  +Y  ++   C      E  +L  +ML +  + D  T    ++ + ++   
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHR-ALFKHLEKDHE 705

Query: 497 NNAIQLLDRI 506
           +  ++ L+R+
Sbjct: 706 SREVEFLERL 715



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 215/458 (46%), Gaps = 10/458 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   +  +++ V  +  +MK   +  SE  +  +IN + + G  E+A +    +R  G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              T   +N +++    +  F     +   M   G+ P   TYNI + ALC   R+D A 
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGL 175
           +LL  M     APD VSY T++    K+G+  EA  L   +R G     +  YN LI+GL
Sbjct: 364 ELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 419

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +E A  L  EM  + I P+VITY+T++      GN+  +  +  +M  +G  P+ 
Sbjct: 420 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++T+   G L  G + +A  L   M+  +   P++  Y+  I GLC  G++ +A+    
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++      P+  TY+ +I G+ + G    A  +++ M+     P+V+ Y  ++    +  
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              QA     +M      PN +T N  + G+C  G +D A + L +M++    PN  +Y 
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            L+       + +E  +L  E+    I+ +  T+  + 
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 168/383 (43%), Gaps = 5/383 (1%)

Query: 183 EAFWLLCE-MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E F L  E M+ +G  P+V   + ++  L D   +  +  +   M   G  P + +F ++
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L      G       +W  M R     + V Y+ LI+G   NG M+EA      M  +  
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
                +++ LI+G+ K G    A  + + M++ G  P    Y   +  LC       A  
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+  MA     P+ V++NT + G    G+   A  L D ++  +  P+I TYN L+DGL 
Sbjct: 365 LLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               ++ A  L  E+    I  +++TY T++ G  + G +  A ++  +ML +G K D  
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +        + G  + A +L + +       PD+  Y   + G+C  G + +A  + +K
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           +   G+ P+  T+  ++R    N
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLEN 563


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 276/580 (47%), Gaps = 60/580 (10%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           + + +F  I   G +    +Y   + A +      M      +M++ G+ PNVF YN+L+
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----G 162
             LC+  R+  A K+  EM N       V+Y T++   CK+G+++ A ++  R       
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL--CDVGNVETSL 220
             +  +N+L++GLCK  K++EA  LL EM   G  P+  TYS +   L  CD GN   ++
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGN--GAM 336

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  Q   +G   N ++ + LL G    G+  +A ++  +    G + + V Y+T ++G 
Sbjct: 337 ELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGY 396

Query: 281 CSNGSMDEAV--------------SVSY---------------------QMEENSCPPNV 305
           C  G M++A+              S+++                     +M E    P+V
Sbjct: 397 CRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSV 456

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LIDG+ K        QI  +M   G  PNVV+Y  ++  LC++    +A  ++  
Sbjct: 457 ETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRD 516

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      PN   +N  I G C  G+V  A++  D+M + E  P + TYN L+DGL +  +
Sbjct: 517 MICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGK 576

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + EA + +T+I   G   +++TYN+++ G   AG V +   L   M   G K    T++ 
Sbjct: 577 LTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHP 636

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGG-EWN--PDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +I    K+G     I+L++++     + N  PD + Y +++      G  Q+A+   Q M
Sbjct: 637 LISGCSKEG-----IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGM 691

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL--GPVYILDDIMAN 580
           L++GI P+  T+N L+      LGH   G +  + D++ N
Sbjct: 692 LDQGIHPDKMTYNSLI------LGHFREGKLSNIKDLVNN 725



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/549 (26%), Positives = 268/549 (48%), Gaps = 16/549 (2%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+ Y +VG  + A KM  R++E  + P +  +N +L  L    +      +   M+ +
Sbjct: 251 TLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVN 310

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+ +TY+IL   L + +  +GA +L  +   KG   +  + + +++ +CK G+VE+A
Sbjct: 311 GFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKA 370

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            E+  +F      +   +YN  +NG C+   + +A   +  M   G+ PN IT++++I  
Sbjct: 371 EEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDK 430

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            CD+  ++ +   + +M  +G  P++ ++ +L+ GY           +  +M   G  PN
Sbjct: 431 FCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPN 490

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV+Y +LI+ LC +G + EA  V   M      PN   Y+ LIDG    G +  A + ++
Sbjct: 491 VVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFD 550

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+ +  SP +V Y  ++  LC+     +A   + ++      P+ +T+N+ I G    G
Sbjct: 551 EMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAG 610

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI---- 445
            V   + L + MK     P + TY+ L+ G       KE  ELV ++    +Q+N+    
Sbjct: 611 NVSKCLGLYETMKNLGIKPTVRTYHPLISGC-----SKEGIELVEKLYNEMLQMNLLPDR 665

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V YN ++H     G   +A+ L   ML +G   D +T+N +I  + ++GK++N   L++ 
Sbjct: 666 VVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNN 725

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           ++   E  P   +Y  L+ G C+      A+++ ++M+     PN +  N L   L    
Sbjct: 726 MKAK-ELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGL-EQE 783

Query: 566 GHLGPVYIL 574
           G L  V ++
Sbjct: 784 GRLQEVQVI 792



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 252/499 (50%), Gaps = 7/499 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +Y  M+RDG  P++ + ++L   L    +      L +E+ N G   D   Y   + +  
Sbjct: 128 LYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAV 187

Query: 147 KLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           KL  ++   E   +MR       V +YN LI GLC+E +I +A  +  EM +  +  +++
Sbjct: 188 KLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIV 247

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+T+I   C VG ++ +  +  +M  +   PNI +F SLL G     +  EA  L   M
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              GF+P+   YS L  GL      + A+ +  Q  E     N  T S L++G  K G +
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKV 367

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A +I  +   NG   + V Y   V   C+    ++A   IE+M      PN++TFN+ 
Sbjct: 368 EKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSL 427

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I   C    +D A + + +M +    P++ TYN L+DG  ++      F+++ ++E+ G+
Sbjct: 428 IDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGV 487

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+V+Y ++++ +C+ G ++EA  +L  M+  G   +A  +N++I   C  GKV +A++
Sbjct: 488 KPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALR 547

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             D +    E +P +++Y  L+ G+C  G + EA  +L ++ + G  P+  T+N L+ S 
Sbjct: 548 FFDEMM-RSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI-SG 605

Query: 562 FSNLGHLGPVYILDDIMAN 580
           ++N G++     L + M N
Sbjct: 606 YANAGNVSKCLGLYETMKN 624



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 204/438 (46%), Gaps = 8/438 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +L++    G+   E ++ + +N Y R+G   +A+    R+  FGL+P    +N
Sbjct: 366 KVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFN 425

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D                 M   G+ P+V TYN L+    K    D  +++L +M   
Sbjct: 426 SLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEI 485

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR--FGSGV----SVYNALINGLCKEHKIEE 183
           G  P+ VSY ++++ +CK G++ EA E+ +R     GV     VYN LI+G C   K+++
Sbjct: 486 GVKPNVVSYGSLINCLCKDGKILEA-EIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A     EM+   I P ++TY+ +I  LC  G +  +   L Q+   G +P++ ++ SL+ 
Sbjct: 545 ALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLIS 604

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY   G   +   L+  M   G  P V  Y  LI G CS   ++    +  +M + +  P
Sbjct: 605 GYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLP 663

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +   Y+A+I  +A+ GN   A  +   M+  G  P+ + Y  ++    +         L+
Sbjct: 664 DRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLV 723

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             M  +   P   T++  +KG C       A     +M +   LPN +  NEL  GL + 
Sbjct: 724 NNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQE 783

Query: 424 NRVKEAFELVTEIEKCGI 441
            R++E   + +E+   GI
Sbjct: 784 GRLQEVQVICSEMNVKGI 801



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 165/342 (48%), Gaps = 36/342 (10%)

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +L+  M R+G LP++V+ S L   L +     + V +  ++E +    +   Y+  
Sbjct: 123 REAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDTFMYAKA 182

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I    K  NL    +  + M   G  PNV  Y  ++  LC+      A  + ++M   N 
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + VT+NT I G C  G +D A K+ ++MK+    PNI T+N LL GL ++ ++KEA  
Sbjct: 243 VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARS 302

Query: 432 LVTEIE-------------------KC----------------GIQLNIVTYNTILHGVC 456
           L+ E+E                   +C                GI++N  T + +L+G+C
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLC 362

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G V +A ++L K    G   D + +N  +  YC+ G +N AI  ++R+   G   P+ 
Sbjct: 363 KQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG-LRPNS 421

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I++ SL+   C+   M +A  +++KM  +G+ P+  T+N L+
Sbjct: 422 ITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 7/261 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D +++  + M+ E +S +   +  +I+   + G   +A     +I   G  P V  YN +
Sbjct: 544 DALRFFDEMMRSE-ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           +         S    +Y  MK  G++P V TY+ L+   C    ++   KL  EM     
Sbjct: 603 ISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNL 661

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAM-RFGSGVS----VYNALINGLCKEHKIEEAFW 186
            PD V Y  ++    ++G  ++A  L       G+      YN+LI G  +E K+     
Sbjct: 662 LPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKD 721

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L+  M  + + P   TY  ++   CD+ +   +     +M      PN      L  G  
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLE 781

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             GR  E   + + M  +G +
Sbjct: 782 QEGRLQEVQVICSEMNVKGII 802


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 270/541 (49%), Gaps = 28/541 (5%)

Query: 26  VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           +SC+  + I  + + RR+  AE+ L+    ++  G    V  +N ++     +       
Sbjct: 117 ISCN--ILIKKLCARRRLADAERVLEA---LKASGAADAVS-HNTLVAGYCRDGSLGDAE 170

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +    +  G   NV TY  L+   C++ R+  A +L+  M     APD  +Y T++  +
Sbjct: 171 RVVEAARASGTA-NVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGL 226

Query: 146 CKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C   Q E+A EL               +   I   C+   ++ A  LL +M   G  P+V
Sbjct: 227 CCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDV 286

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           I YST+++   + G V+ +L +L  M    C PN   + + LKG  + GR  E  +L   
Sbjct: 287 IIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAE 343

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+R+   PN   +STLI+ LC N  ++ AV V  QM++    P+V +Y+ +I  F+    
Sbjct: 344 MVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQAR 403

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A ++   M+   C P+ +++  ++K LC+   ++ A  L+ KM  ++C  N +TFN 
Sbjct: 404 ADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNI 460

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  G+V  A+++ + M +Y C+P+I TY+ L++G       + AF+L   +    
Sbjct: 461 LIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP--- 517

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
            + +I +YN  L G+C A    +A +L+  M+ E    + +TFNI+I + C++G VN AI
Sbjct: 518 CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAI 577

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            + +++   G   PDI +Y +L+ G    G + +A  +L  M  E   P+  ++N +++ 
Sbjct: 578 DVYEQMPKYG-ITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKG 633

Query: 561 L 561
           L
Sbjct: 634 L 634



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 222/484 (45%), Gaps = 72/484 (14%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++I+ Y R G    AL++   I    + P    YN +L  L    ++     +   M
Sbjct: 186 TYTALIDGYCRSGRLADALRL---IASMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREM 242

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R+   PN  T+   ++A C+N  +D A +LL +M   GC PD + Y+T+V+   + G+V
Sbjct: 243 IRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRV 302

Query: 152 EEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +EA +L   M        YNA + GLC   + EE   L+ EMV +   PN  T+ST+I+S
Sbjct: 303 DEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINS 362

Query: 210 LCDVGNVETSLGILGQMFVRG--------------------------------CNPNIHS 237
           LC    VE ++ +L QM   G                                C P+  S
Sbjct: 363 LCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTIS 422

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F ++LK      R ++A +L  +M+++    N + ++ LI  LC NG + +A+ V   M 
Sbjct: 423 FNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMP 482

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +  C P++ TYS+LI+GF++ G    A  ++  M    C  ++ +Y   +K LC    + 
Sbjct: 483 KYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWD 539

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY------------- 404
            A  LI  M  E+C PN VTFN  I  LC  G V+ A+ + +QM +Y             
Sbjct: 540 DAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALI 599

Query: 405 -------------------ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
                               C P+  +YN +L GL R  R K+A +LVTE+ +     N 
Sbjct: 600 NGYSEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNE 659

Query: 446 VTYN 449
           VT+ 
Sbjct: 660 VTFK 663



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 180/367 (49%), Gaps = 12/367 (3%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P VI+ + +I  LC    +  +  +L  +   G    + S  +L+ GY   G   +A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAADAV-SHNTLVAGYCRDGSLGDAERV 172

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
                R     NVV Y+ LI G C +G + +A+ +   M      P+  TY+ ++ G   
Sbjct: 173 VE-AARASGTANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A     A ++   MI N C PN V +   ++  CQN +  +A  L+E+M    C P+ + 
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++T + G    GRVD A+KLL+ M    C PN   YN  L GL    R +E  EL+ E+ 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +     N  T++T+++ +C+  +V  A ++L +M   G   D +++N II  +  Q + +
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARAD 405

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A++LL  +       PD IS+ ++L  +C +    +A   + KML +    N  T+N+L
Sbjct: 406 DALKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNIL 461

Query: 558 VRSLFSN 564
           + SL  N
Sbjct: 462 IDSLCQN 468



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 42/224 (18%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK----------------------------- 402
           PP  ++ N  IK LC   R+  A ++L+ +K                             
Sbjct: 113 PPAVISCNILIKKLCARRRLADAERVLEALKASGAADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 403 ----QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
               +     N+ TY  L+DG  R  R+ +A  L+  +    +  +  TYNT+L G+C A
Sbjct: 173 VEAARASGTANVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCA 229

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
               +A +L+ +M+      + +TF   I A+C+ G ++ A++LL+++   G   PD+I 
Sbjct: 230 KQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYG-CTPDVII 288

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
           Y++L+ G    G + EA     K+LN  +C PN   +N  ++ L
Sbjct: 289 YSTLVNGFSEHGRVDEAL----KLLNTMLCRPNTVCYNAALKGL 328


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 159/612 (25%), Positives = 284/612 (46%), Gaps = 84/612 (13%)

Query: 28  CSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYNHILDALLAENRFSMINP 86
           C E V ++++ +Y +  +  +AL +F  +   FG  PT++ +N +L+A +  ++++    
Sbjct: 75  CPEDVPLTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAEN 134

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            +   +   + PNV TYN+L+K +CK    +    LL  M   G +PD ++Y T++  + 
Sbjct: 135 FFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVA 194

Query: 147 KLGQV-------EEARELAMRFGSGVSVYNALINGLCKEHKIEEA--FW--LLCEMVDRG 195
           K G +       +E RE  +     V  YN +I+G  K     +A   W  LL E +   
Sbjct: 195 KSGDLGFALEVFDEMRERGVE--PDVVCYNMIIDGFFKRGDFVKAGEMWERLLREEL--- 249

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+V++Y+ +IS LC  G     L I  +M       ++ ++++L+ G    G    A 
Sbjct: 250 VFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGAR 309

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            ++  M+  G  P+VV  + +++GLC  G+++E   +  +M + S   NV +Y+  + G 
Sbjct: 310 KVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL-RNVRSYNIFLKGL 368

Query: 316 AKAGNLLGASQIWNRMI---------------------------------SNGCSPNVVA 342
            + G +  A  +W+ ++                                   G   +  A
Sbjct: 369 FENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFA 428

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y+ ++  LC+     +A  ++E M    C  N+   N  I G     ++D A+K+  +M 
Sbjct: 429 YSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMS 488

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
              C   + +YN L++GLLR  R +EA++ V E+ + G + +I+TY+T++ G+  + M+ 
Sbjct: 489 GKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMD 548

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG------------- 509
            A +L  + L  G K D I +NI+I+  C  GKV +A+QL   +R               
Sbjct: 549 AALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIME 608

Query: 510 --------------------GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
                                E  PDIISY   L G+C+ G + +A  +L   L  G  P
Sbjct: 609 GFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLP 668

Query: 550 NFATWNVLVRSL 561
              TWN+LVR++
Sbjct: 669 TAITWNILVRAV 680



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 238/480 (49%), Gaps = 12/480 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDAL 75
           +  +M+  GV      +  +I+ + + G   +A +M+ R+ RE  + P+V  YN ++  L
Sbjct: 205 VFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGL 264

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
               RFS    I+  MK++  + ++FTY+ L+  L +   + GA K+  EM  +G  PD 
Sbjct: 265 CKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDV 324

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           V+   +++ +CK G VEE  EL    G      V  YN  + GL +  K+++A  L    
Sbjct: 325 VTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIFLKGLFENGKVDDAMMLW--- 381

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR--GCNPNIHSFTSLLKGYLLGG 249
            D  ++ +  TY  ++  LC  G V  +L +L +   R  G + +  +++SL+      G
Sbjct: 382 -DGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEG 440

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  EA  +   M + G   N    + LI G   +  +D AV V  +M    C   V +Y+
Sbjct: 441 RLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYN 500

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI+G  +A     A    N M+  G  P+++ Y+ ++  L ++NM   A  L  +    
Sbjct: 501 ILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDT 560

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ + +N  I  LC  G+V+ A++L   ++Q +C+ N+ T+N +++G  +V   + A
Sbjct: 561 GHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFYKVGNCEMA 619

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++   I +  +Q +I++YN  L G+C  G V +A   L   L+ G    AIT+NI++ A
Sbjct: 620 SKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRA 679



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 196/392 (50%), Gaps = 13/392 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E  ++ G + + ++M   GV        +++N   + G  E+  +++  + +  
Sbjct: 295 LIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCS 354

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+  V+ YN  L  L    +      ++  +    +E +  TY +++  LC N  V+ A 
Sbjct: 355 LR-NVRSYNIFLKGLFENGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRAL 409

Query: 121 KLLVEMGNK--GCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFGSGVS--VYNALIN 173
           ++L E  ++  G   D  +Y+++++++CK G+++EA    EL  + G   +  V N LI+
Sbjct: 410 QVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLID 469

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K  K++ A  +  EM  +G    V++Y+ +I+ L        +   + +M  +G  P
Sbjct: 470 GFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKP 529

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +I ++++L+ G         A  LW++ +  G  P+++ Y+ +IH LCS+G +++A+ + 
Sbjct: 530 DIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLY 589

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             + +  C  N+ T++ +++GF K GN   AS+IW  ++ +   P++++Y   +K LC  
Sbjct: 590 STLRQKKCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSC 648

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
                A   ++        P  +T+N  ++ +
Sbjct: 649 GRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 147/294 (50%), Gaps = 8/294 (2%)

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           TL+         +EA+ V   M     C P + +++ L++ F ++     A   +    +
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
              SPNV  Y  ++KV+C+   F +   L+  M      P+ +T+ T I G+   G + +
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTIL 452
           A+++ D+M++    P++  YN ++DG  +     +A E+   + +  +   ++V+YN ++
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMI 261

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+ G   E  ++  +M     K D  T++ +I+   + G +  A ++ + + G G  
Sbjct: 262 SGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV- 320

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP--NFATWNVLVRSLFSN 564
            PD+++  ++L G+C +G ++E F   ++M   G C   N  ++N+ ++ LF N
Sbjct: 321 RPDVVTCNAMLNGLCKAGNVEECFELWEEM---GKCSLRNVRSYNIFLKGLFEN 371



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 122/251 (48%), Gaps = 4/251 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  +D    +++ M   G   +  V   +I+ + +    + A+K+F  +   G
Sbjct: 432 LINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKG 491

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              TV  YN +++ LL   RF       + M   G +P++ TY+ L+  L ++N +D A 
Sbjct: 492 CSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAAL 551

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV--YNALINGLC 176
           +L  +  + G  PD + Y  ++  +C  G+VE+A +L   +R    V++  +N ++ G  
Sbjct: 552 RLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCVNLVTHNTIMEGFY 611

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K    E A  +   +++  + P++I+Y+  +  LC  G V  ++G L    VRG  P   
Sbjct: 612 KVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAI 671

Query: 237 SFTSLLKGYLL 247
           ++  L++  + 
Sbjct: 672 TWNILVRAVIF 682


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 243/457 (53%), Gaps = 14/457 (3%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           +++++NIL+K  C  +++  A     ++   G  P  V++ T++  +C   +V EA +L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 159 MRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +     V  +  L+NGLC+E ++ EA  LL  MV+ G+ PN ITY TI+  +C +G+  
Sbjct: 74  HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 218 TSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           ++L +L +M  +    P++  +++++ G    GR  +A +L+  M  +G  P++V YS +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+G CS+G   EA  +  +M      P+V T+S LI+   K G+L  A  +   MIS+G 
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-----------AFENCPPNTVTFNTFIKGL 385
            PNVV    ++  LC +     A  + + M           AF    P+  T+N  I GL
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+   A +L ++M     +P+  TY+ +++GL + +R+ EA ++   +       NI
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VT+NT++ G C+AGMV +  +L  +M   G   +AIT+  +I  + K G +N ++ +   
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQE 433

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +   G + PD I+  ++L G+ +   +++A   L+++
Sbjct: 434 MISSGVY-PDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 222/440 (50%), Gaps = 21/440 (4%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           AL  F ++ + G  PT+  +N +L  L  E+R S    ++  M +    PNV T+  L+ 
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMN 89

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------G 162
            LC+  RV  A  LL  M   G  P+ ++Y TIV  +CK+G    A  L  +        
Sbjct: 90  GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V +Y+A+I+GL K+ +  +A  L  EM D+GI P+++TYS +I+  C  G    +  +
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M VR  +P++ +F+ L+   +  G  + A DL   MI  G  PNVV  +TL+ GLC 
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 283 NGSMDEAVSVSYQMEE-----------NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           +G + +A+ +   M++           N   P+V TY+ LI G    G  L A +++  M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G  P+ V Y+ M+  LC+ +   +A  + + M  ++  PN VTFNT I G C  G V
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D  ++L  +M +   + N  TY  L+ G  +V  +  + ++  E+   G+  + +T   +
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 452 LHGVCRAGMVVEAFQLLGKM 471
           L G+     + +A  +L ++
Sbjct: 450 LTGLWSKEELKKALAMLEEL 469



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 222/426 (52%), Gaps = 19/426 (4%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N LI   C   K+  A     ++   G  P ++T++T++  LC    V  +L +  QM 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
              C PN+ +FT+L+ G    GR  EA  L +RM+ +G  PN + Y T++ G+C  G   
Sbjct: 77  ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 288 EAVSVSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            A+++  +MEE S   P+V  YSA+IDG  K G    A  ++  M   G  P++V Y+CM
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C +  + +A  L+++M      P+ VTF+  I  L   G ++ A  LL +M     
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKC-----------GIQLNIVTYNTILHGV 455
            PN+ T N LLDGL    ++K+A E+   ++K            G++ ++ TYN ++ G+
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
              G  +EA +L  +M   G   D +T++ +I   CKQ +++ A Q+ D + G   ++P+
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM-GSKSFSPN 372

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYIL 574
           I+++ +L+ G C +G + +      +M   GI  N  T+  L+R  F  +G++ G + I 
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG-FRKVGNINGSLDIF 431

Query: 575 DDIMAN 580
            +++++
Sbjct: 432 QEMISS 437



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 194/372 (52%), Gaps = 17/372 (4%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           ++ +++ +I   C    +  +L   G++   G +P + +F +LL G  +  R  EA DL+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           ++M +    PNVV ++TL++GLC  G + EAV++  +M E+   PN  TY  ++DG  K 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 319 GNLLGASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           G+ + A  +  +M   +   P+VV Y+ ++  L ++     A +L  +M  +   P+ VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++  I G C  G+   A +LL +M   +  P++ T++ L++ L++   +  A +L+ E+ 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM-----------LIEGTKLDAITFNII 486
             G+  N+VT NT+L G+C +G + +A ++   M              G + D  T+NI+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I     +GK   A +L + +   G   PD ++Y+S++ G+C    + EA      M ++ 
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRG-IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368

Query: 547 ICPNFATWNVLV 558
             PN  T+N L+
Sbjct: 369 FSPNIVTFNTLI 380



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 192/388 (49%), Gaps = 17/388 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+P    Y  I+D +    +  S +N +   
Sbjct: 83  TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 142

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   ++P+V  Y+ ++  L K+ R   A  L +EM +KG  PD V+Y+ +++  C  G+
Sbjct: 143 EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGK 202

Query: 151 VEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA+      L  +    V  ++ LIN L KE  +  A  LL EM+  G+ PNV+T +T
Sbjct: 203 WSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNT 262

Query: 206 IISSLCDVGNVETSLGILGQM-----------FVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           ++  LCD G ++ +L +   M              G  P++ ++  L+ G +  G+  EA
Sbjct: 263 LLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEA 322

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
            +L+  M   G +P+ V YS++I+GLC    +DEA  +   M   S  PN+ T++ LI G
Sbjct: 323 EELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITG 382

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           + KAG +    +++  M   G   N + Y  +++   +    + +  + ++M      P+
Sbjct: 383 YCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           T+T    + GL     +  A+ +L++++
Sbjct: 443 TITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 194/407 (47%), Gaps = 21/407 (5%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +AL +F+++     KP V  +  +++ L  E R      +   M  DG++PN  TY  ++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 108 KALCKNNRVDGAYKLLVEMGN-KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--- 163
             +CK      A  LL +M       PD V Y+ I+  + K G+  +A+ L +       
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 164 --GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              +  Y+ +ING C   K  EA  LL EM+ R I P+V+T+S +I++L   G++ ++  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-----------GFLPNV 270
           +L +M   G  PN+ +  +LL G    G+  +A +++  M +            G  P+V
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ LI GL + G   EA  +  +M      P+  TYS++I+G  K   L  A+Q+++ 
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M S   SPN+V +  ++   C+  M      L  +M       N +T+ T I+G    G 
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++ ++ +  +M      P+  T   +L GL     +K+A  ++ E++
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 191/367 (52%), Gaps = 17/367 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDAL 75
           LL +M  +G+  ++  + ++++   ++G    AL +  ++ E   +KP V IY+ I+D L
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + R +    ++  M+  G+ P++ TY+ ++   C + +   A +LL EM  +  +PD 
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCE 190
           V+++ +++++ K G +  A++L     S      V   N L++GLC   K+++A  +   
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282

Query: 191 M------VD-----RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           M      +D      G++P+V TY+ +IS L + G    +  +  +M  RG  P+  +++
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           S++ G     R  EA+ +++ M  + F PN+V ++TLI G C  G +D+ + +  +M   
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
               N  TY  LI GF K GN+ G+  I+  MIS+G  P+ +    M+  L       +A
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKA 462

Query: 360 HSLIEKM 366
            +++E++
Sbjct: 463 LAMLEEL 469



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 173/339 (51%), Gaps = 15/339 (4%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +I+SF  L+K +    +   A   + ++ + GF P +V ++TL+HGLC    + EA+ + 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           +QM    C PNV T++ L++G  + G ++ A  + +RM+ +G  PN + Y  +V  +C+ 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 354 NMFHQAHSLIEKMA-FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                A +L+ KM    +  P+ V ++  I GL   GR   A  L  +M+     P+I T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ +++G     +  EA  L+ E+    I  ++VT++ +++ + + G +  A  LL +M+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQL----------LDRIRGGGEWNPDIISYTSL 522
             G   + +T N ++   C  GK+ +A+++          +D         PD+ +Y  L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + G+ N G   EA    ++M + GI P+  T++ ++  L
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGL 348



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 10/263 (3%)

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           P ++ +++ LI  F     L  A   + ++   G  P +V +  ++  LC  +   +A  
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M    C PN VTF T + GLC  GRV  A+ LLD+M +    PN  TY  ++DG+ 
Sbjct: 72  LFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 422 RVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++     A  L+ ++E+   I+ ++V Y+ I+ G+ + G   +A  L  +M  +G   D 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDR--IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           +T++ +I  +C  GK + A +LL    +R   + +PD+++++ L+  +   G +  A   
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVR---KISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
           LQ+M++ G+CPN  T N L+  L
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGL 267



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 142/299 (47%), Gaps = 16/299 (5%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q L  +M+ +G+      +  +IN +   G   +A ++   +    + P V  ++ +++A
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK----- 129
           L+ E   +    +   M   G+ PNV T N LL  LC + ++  A ++   M        
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291

Query: 130 ------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKE 178
                 G  PD  +Y  ++S +   G+  EA EL               Y+++INGLCK+
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +++EA  +   M  +   PN++T++T+I+  C  G V+  L +  +M  RG   N  ++
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
            +L++G+   G  + + D++  MI  G  P+ +    ++ GL S   + +A+++  +++
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           P +  +FN  IK  C C ++ +A+    ++ +    P + T+N LL GL   +RV EA +
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  ++ K     N+VT+ T+++G+CR G VVEA  LL +M+ +G + + IT+  I+   C
Sbjct: 72  LFHQMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G   +A+ LL ++       PD++ Y++++ G+   G   +A     +M ++GI P+ 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 552 ATWNVLVRSLFSN 564
            T++ ++    S+
Sbjct: 188 VTYSCMINGFCSS 200



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 67/126 (53%), Gaps = 7/126 (5%)

Query: 438 KCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           K G+Q+  +I ++N ++   C    +  A    GK+   G     +TFN +++  C + +
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+ A+ L  ++       P+++++T+L+ G+C  G + EA   L +M+ +G+ PN  T+ 
Sbjct: 66  VSEALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 556 VLVRSL 561
            +V  +
Sbjct: 121 TIVDGM 126


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 258/540 (47%), Gaps = 10/540 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           + ++++     +G+  +V+  Y +   AE    +F  + E GL      Y+ ++D+    
Sbjct: 184 EALEIKNCLMQKGLEANVVTYYGKFNEAEL---LFKEMGEKGLCANHITYSILIDSFCRR 240

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                       M +  +E  V+ YN L+   CK      A     EM +KG  P  V+Y
Sbjct: 241 GEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTY 300

Query: 139 TTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVD 193
           T+++S  C  G+  +A ++       G+S     + A+I+GLC+ + + EA  L  EM +
Sbjct: 301 TSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKE 360

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I P+ +TY+ +I   C  GN+  +  +L +M  +G  P+ +++  L+ G    GR  E
Sbjct: 361 RKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSE 420

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A +  + + ++    N + YS L+HG C  G   +AVS    M E     ++  Y+ LID
Sbjct: 421 AKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILID 480

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G A+  +      +   M ++G  P+ V YT M+    +     +A  L + M  E C P
Sbjct: 481 GTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLP 540

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N VT+   I GLC  G +D A  L  +    +  PN  TY   LD L R   +++A +L 
Sbjct: 541 NVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLH 600

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
             + K G     V+YN ++ G CR G + EA +LL  M       D IT++ IIY  CK+
Sbjct: 601 HAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKR 659

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             +  AI+L   +   G   PD ++Y+ L+ G C +G +++AF    +M+  G+  N  T
Sbjct: 660 SNLQEAIKLWHTMLDKG-LKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVT 718



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 246/510 (48%), Gaps = 7/510 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + +  + L ++M  +G+  +   +  +I+S+ R G  + A+    ++ +  ++ TV  YN
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++        S     +  M   G+ P V TY  L+   C       A+K+  EM  K
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G +P+  ++T I+S +C+   + EA  L       +       YN +I G C+   I EA
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F LL EMV +G  P+  TY  +IS LC VG V  +   +  +       N   +++L+ G
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   GR  +A      M+  G   ++V Y+ LI G            +  +M  +   P+
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+ +ID  +KAGNL  A  +W+ M+  GC PNVV YT ++  LC+  +  +A  L +
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSK 566

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +    +  PN +T+  F+  L   G ++ A++L   M +   L    +YN L+ G  R+ 
Sbjct: 567 ETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLG 625

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           +++EA +L+  +    I  + +TY+TI++  C+   + EA +L   ML +G K D + ++
Sbjct: 626 KIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYS 685

Query: 485 IIIYAYCKQGKVNNAIQLLDR-IRGGGEWN 513
            +++  C  G++  A +L D  IR G   N
Sbjct: 686 FLVHGCCIAGELEKAFELRDEMIRRGMRSN 715



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 263/591 (44%), Gaps = 68/591 (11%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++N   R       L +F  I    ++P + IY+ ++ +L     F+    +   M+ +
Sbjct: 101 ALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHWMEFN 160

Query: 95  GMEPNVFTYNILLKALCKNNRV--------------------------DGAYKLLVEMGN 128
             + ++  YN+L+  LCK+ R+                          + A  L  EMG 
Sbjct: 161 QCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEMGE 220

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEE 183
           KG   + ++Y+ ++ S C+ G+++ A     +         V  YN+LING CK      
Sbjct: 221 KGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASA 280

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS--- 240
           A +   EM+D+G+ P V+TY+++IS  C+ G    +  +  +M  +G +PN ++FT+   
Sbjct: 281 AKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIIS 340

Query: 241 --------------------------------LLKGYLLGGRTHEASDLWNRMIREGFLP 268
                                           +++G+   G   EA  L + M+ +GF+P
Sbjct: 341 GLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVP 400

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +   Y  LI GLCS G + EA      + ++    N   YSAL+ G+ K G    A    
Sbjct: 401 DTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSAC 460

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M+  G + ++V Y  ++    + +       L+++M      P+ V +   I      
Sbjct: 461 RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKA 520

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G +  A  L D M    CLPN+ TY  L++GL +   + +A  L  E     +  N +TY
Sbjct: 521 GNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITY 580

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
              L  + R G + +A QL   ML +G     +++NI+I  +C+ GK+  A +LL  +  
Sbjct: 581 GCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGM-T 638

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             +  PD I+Y+++++  C    +QEA      ML++G+ P+   ++ LV 
Sbjct: 639 DNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVH 689



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 251/511 (49%), Gaps = 15/511 (2%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           +++  L P V+  + +L+ LL   RF+ +  ++ ++    ++P+++ Y+ ++++LC+   
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---MRFG--SGVSVYNA 170
            + A +++  M    C    V Y  ++  +CK  ++ EA E+    M+ G  + V  Y  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
                    K  EA  L  EM ++G+  N ITYS +I S C  G ++ ++G L +M    
Sbjct: 207 ---------KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
               ++ + SL+ GY   G    A   ++ MI +G  P VV Y++LI G C+ G   +A 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            V  +M      PN  T++A+I G  +A  +  A +++  M      P+ V Y  M++  
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C++    +A  L+++M  +   P+T T+   I GLC  GRV  A + +D + +     N 
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNN 437

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             Y+ L+ G  +  R K+A      + + G+ +++V Y  ++ G  R       F LL +
Sbjct: 438 MCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKE 497

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G + DA+ +  +I  + K G +  A  L D +   G   P++++YT+L+ G+C +G
Sbjct: 498 MHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCL-PNVVTYTALINGLCKAG 556

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            M +A +  ++ L   + PN  T+   +  L
Sbjct: 557 LMDKAELLSKETLVSDVTPNHITYGCFLDHL 587



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 217/440 (49%), Gaps = 6/440 (1%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
             +Y   +M  +G++ +   + S+I+ Y   G   +A K++  +   G+ P    +  I+
Sbjct: 280 AAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAII 339

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
             L   N  +    ++  MK   + P+  TYN++++  C++  +  A+ LL EM  KG  
Sbjct: 340 SGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFV 399

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWL 187
           PD  +Y  ++S +C +G+V EA+E                Y+AL++G CKE + ++A   
Sbjct: 400 PDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSA 459

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
              MV+RG+  +++ Y+ +I       +     G+L +M   G  P+   +T+++  +  
Sbjct: 460 CRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSK 519

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   EA  LW+ M+ EG LPNVV Y+ LI+GLC  G MD+A  +S +   +   PN  T
Sbjct: 520 AGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHIT 579

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y   +D   + GN+  A Q+ + M+  G     V+Y  +++  C+     +A  L+  M 
Sbjct: 580 YGCFLDHLTRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMT 638

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
             +  P+ +T++T I   C    +  A+KL   M      P+   Y+ L+ G      ++
Sbjct: 639 DNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELE 698

Query: 428 EAFELVTEIEKCGIQLNIVT 447
           +AFEL  E+ + G++ N VT
Sbjct: 699 KAFELRDEMIRRGMRSNHVT 718



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 210/443 (47%), Gaps = 28/443 (6%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V   +AL+NGL +  +  +   L  ++V   + P++  YS ++ SLC++ +   +  ++ 
Sbjct: 96  VRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIH 155

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV------------- 271
            M    C  +I  +  L+ G     R  EA ++ N ++++G   NVV             
Sbjct: 156 WMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLF 215

Query: 272 -------------AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
                         YS LI   C  G MD A+    +M + S    V  Y++LI+G+ K 
Sbjct: 216 KEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKL 275

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           GN   A   ++ MI  G +P VV YT ++   C    +H+A  +  +M  +   PNT TF
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I GLC    +  A++L  +MK+ + +P+  TYN +++G  R   + EAF L+ E+  
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G   +  TY  ++ G+C  G V EA + +  +  +  KL+ + ++ +++ YCK+G+  +
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKD 455

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+    R+        D++ Y  L+ G       +  F  L++M N G+ P+   +  ++
Sbjct: 456 AVSAC-RVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMI 514

Query: 559 RSLFSNLGHLGPVYILDDIMANK 581
               S  G+L   + L DIM ++
Sbjct: 515 -DRHSKAGNLKEAFGLWDIMVDE 536



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 29/351 (8%)

Query: 213 VGNVETSLGILGQMFVRGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           V  V   L +     ++ CN  P + + ++LL G L   R ++   L++ ++     P++
Sbjct: 72  VDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDI 131

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             YS ++  LC     ++A  + + ME N C  ++  Y+ LI G  K+  +  A +I N 
Sbjct: 132 YIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNC 191

Query: 331 MISNGCSPNVV--------------------------AYTCMVKVLCQNNMFHQAHSLIE 364
           ++  G   NVV                           Y+ ++   C+      A   ++
Sbjct: 192 LMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLD 251

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM   +       +N+ I G C  G    A    D+M      P + TY  L+ G     
Sbjct: 252 KMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEG 311

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
              +AF++  E+   GI  N  T+  I+ G+CRA M+ EA +L G+M         +T+N
Sbjct: 312 EWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYN 371

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           ++I  +C+ G ++ A  LLD + G G + PD  +Y  L+ G+C+ G + EA
Sbjct: 372 VMIEGHCRSGNISEAFHLLDEMVGKG-FVPDTYTYRPLISGLCSVGRVSEA 421


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 271/528 (51%), Gaps = 11/528 (2%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           Y +  +AE+ L  F ++   G  P+V+  N +L  L      +  + +Y  M   G+ P 
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA- 158
           V T+N +L +  K   ++   K+ +EM  +      V+Y  +++   K G++EEAR    
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334

Query: 159 --MRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              R G  V+ Y  N LI G CK+   ++A+ +  EM++ GI P   TY+  I +LCD G
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ +  +L  M      P++ S+ +L+ GY+  G+  EAS L++ +      P++V Y+
Sbjct: 395 RIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYN 450

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI GLC +G+++ A  +  +M      P+V TY+ L+ GF K GNL  A+++++ M+  
Sbjct: 451 TLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK 510

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDW 393
           G  P+  AYT       +     +A  L E+M A ++  P+   +N  I GLC  G +  
Sbjct: 511 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 570

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A++   ++ +   +P+  TY  ++ G L   + K A  L  E+ +  +  +++TY  +++
Sbjct: 571 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 630

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G  +AG + +AFQ   +M   G + + +T N ++Y  CK G ++ A + L ++   G   
Sbjct: 631 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG-IP 689

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  SYT L+   C+    +E     ++ML++ I P+  T   L + L
Sbjct: 690 PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 737



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 239/471 (50%), Gaps = 2/471 (0%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           + M   G+  +   F ++++S  + G  E+  K++  ++   ++ +   YN +++     
Sbjct: 264 ETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKN 323

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +       + +M+R G     +++N L++  CK    D A+ +  EM N G  P   +Y
Sbjct: 324 GKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTY 383

Query: 139 TTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
              + ++C  G++++AREL     +  V  YN L++G  K  K  EA  L  ++    I 
Sbjct: 384 NIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIH 443

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+++TY+T+I  LC+ GN+E +  +  +M  +   P++ ++T+L+KG++  G    A+++
Sbjct: 444 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEV 503

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFA 316
           ++ M+R+G  P+  AY+T   G    G  D+A  +  +M   +   P++T Y+  IDG  
Sbjct: 504 YDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLC 563

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K GNL+ A +   ++   G  P+ V YT +++   +N  F  A +L ++M  +   P+ +
Sbjct: 564 KVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 623

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+   I G    GR++ A +   +MK+    PN+ T+N LL G+ +   + EA+  + ++
Sbjct: 624 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 683

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           E+ GI  N  +Y  ++   C      E  +L  +ML +  + D  T   + 
Sbjct: 684 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 734



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 215/458 (46%), Gaps = 10/458 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++   +  +++ V  +  +MK   +  SE  +  +IN + + G  E+A +    +R  G
Sbjct: 281 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 340

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              T   +N +++    +  F     +   M   G+ P   TYNI + ALC   R+D A 
Sbjct: 341 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 400

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGL 175
           +LL  M     APD VSY T++    K+G+  EA  L   +R G     +  YN LI+GL
Sbjct: 401 ELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 456

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +E A  L  EM  + I P+VITY+T++      GN+  +  +  +M  +G  P+ 
Sbjct: 457 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 516

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++T+   G L  G + +A  L   M+  +   P++  Y+  I GLC  G++ +A+    
Sbjct: 517 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 576

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++      P+  TY+ +I G+ + G    A  +++ M+     P+V+ Y  ++    +  
Sbjct: 577 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 636

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              QA     +M      PN +T N  + G+C  G +D A + L +M++    PN  +Y 
Sbjct: 637 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 696

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            L+       + +E  +L  E+    I+ +  T+  + 
Sbjct: 697 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 734



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 168/383 (43%), Gaps = 5/383 (1%)

Query: 183 EAFWLLCE-MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E F L  E M+ +G  P+V   + ++  L D   +  +  +   M   G  P + +F ++
Sbjct: 222 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 281

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L      G       +W  M R     + V Y+ LI+G   NG M+EA      M  +  
Sbjct: 282 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 341

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
                +++ LI+G+ K G    A  + + M++ G  P    Y   +  LC       A  
Sbjct: 342 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 401

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+  MA     P+ V++NT + G    G+   A  L D ++  +  P+I TYN L+DGL 
Sbjct: 402 LLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 457

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               ++ A  L  E+    I  +++TY T++ G  + G +  A ++  +ML +G K D  
Sbjct: 458 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 517

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +        + G  + A +L + +       PD+  Y   + G+C  G + +A  + +K
Sbjct: 518 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 577

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           +   G+ P+  T+  ++R    N
Sbjct: 578 IFRVGLVPDHVTYTTVIRGYLEN 600



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 141/348 (40%), Gaps = 45/348 (12%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID  + LL  M    V      + ++++ Y ++G   +A  +F  +R   + P++  YN 
Sbjct: 396 IDDARELLSSMAAPDVVS----YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 451

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L           +   M    + P+V TY  L+K   KN  +  A ++  EM  KG
Sbjct: 452 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 511

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL------AMRFGSGVSVYNALINGLCK------- 177
             PD  +YTT      +LG  ++A  L             +++YN  I+GLCK       
Sbjct: 512 IKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKA 571

Query: 178 --------------EH--------------KIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                         +H              + + A  L  EM+ + + P+VITY  +I  
Sbjct: 572 IEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG 631

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
               G +E +     +M  RG  PN+ +  +LL G    G   EA     +M  EG  PN
Sbjct: 632 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 691

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
             +Y+ LI   C     +E V +  +M +    P+  T+ AL     K
Sbjct: 692 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 739


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 273/568 (48%), Gaps = 72/568 (12%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++ +YN +L +   E R   ++ +  +M   G+ P  +T+N+L+  LC +  +D A +L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCK 177
             +M  KGC P+  S+  +V   C+ G   +  EL   MR   F     VYN LI+  CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC----NP 233
           E K ++A  L+ EM   G+ P+V+T++  IS+LC  G V  +  I   M +        P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNR--------------------------------- 260
           NI ++  +L G+   G   EA  L+ +                                 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 261 --MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M+  G  PNV +Y+ ++ GLC NG + +A  +   M  +   P+  TY+ L+ G+   
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTC--MVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           G +  A+ +   M+ +GCSPN   YTC  ++  L +     +A  L++KM  +    +TV
Sbjct: 319 GKVSEANNVLREMMRDGCSPN--NYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTV 376

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQM-----------------------KQYECLPNITTY 413
           T N  I GLC  G++D A+++++ M                        + +C+P++ +Y
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISY 436

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + ++ GL +  RV EA +   E+    +Q +   Y+  +H  C+ G +  AF++L  M  
Sbjct: 437 STIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEK 496

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G      T+N +I     + ++     L+D +R  G  +PD+  Y ++L  +C  G ++
Sbjct: 497 KGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERG-VSPDVSIYNNVLSSLCEGGRVK 555

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +A   L +ML +GI PN +++++L+++ 
Sbjct: 556 DAPSVLDEMLQKGISPNISSFSILIKAF 583



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 254/514 (49%), Gaps = 32/514 (6%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  + L  +M  +G   +E  F  ++  Y R G   + L++   +R  G  P   +YN 
Sbjct: 72  LDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNT 131

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ +   E +      +   M++DG+ P+V T+N  + ALC + +V  A ++  +M    
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191

Query: 131 C----APDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV---SVYNALINGLCKEHKI 181
                 P+ ++Y  ++   CK G +EEAR L   M+    +     YN  + GL +  K+
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA  +L EMVD G++PNV +Y+ ++  LC  G +  +  ++  M   G  P+  ++T+L
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L GY   G+  EA+++   M+R+G  PN    + L++ L   G + EA  +  +M E   
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY 371

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-----------------------CSP 338
             +  T + +IDG    G L  A +I N M ++G                       C P
Sbjct: 372 VIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMP 431

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++++Y+ ++  LC+     +A     +M  +N  P++  ++ FI   C  G++  A ++L
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVL 491

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M++  C   + TYN L+ GL   N++ E + L+ E+ + G+  ++  YN +L  +C  
Sbjct: 492 KDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEG 551

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           G V +A  +L +ML +G   +  +F+I+I A+CK
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCK 585



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 173/334 (51%), Gaps = 5/334 (1%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I+ +  LL+     GR    S L   M+  G  P    ++ LI  LC +G +D+A  +
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M E  C PN  ++  L+ G+ +AG      ++   M   G SPN V Y  ++   C+
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL----P 408
                 A  L+++M  +   P+ VTFN  I  LC  G+V  A ++   M+  E L    P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           NI TYN +L G  +   ++EA  L  +++     +N  +YN  L G+ R G ++EA  +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            +M+  G + +  ++NI++   CK G + +A  L+  +   G   PD ++YT+LL G C+
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVL-PDTVTYTTLLHGYCH 317

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +G + EA   L++M+ +G  PN  T N+L+ SL+
Sbjct: 318 TGKVSEANNVLREMMRDGCSPNNYTCNILLYSLW 351



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 191/451 (42%), Gaps = 29/451 (6%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            Q +L++M   G+  +   +  V++   + G+   A  +   +   G+ P    Y  +L 
Sbjct: 254 AQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLH 313

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                 + S  N +   M RDG  PN +T NILL +L K  R+  A +LL +M  KG   
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVI 373

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-------------------------- 167
           D V+   ++  +C  G++++A E+     +  S                           
Sbjct: 374 DTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDL 433

Query: 168 --YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y+ +I+GLCK  ++ EA     EM+ + + P+   Y   I S C  G + ++  +L  
Sbjct: 434 ISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKD 493

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +GCN  + ++ SL+ G     +  E   L + M   G  P+V  Y+ ++  LC  G 
Sbjct: 494 MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGR 553

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           + +A SV  +M +    PN++++S LI  F KA +     +I+   + N C      Y+ 
Sbjct: 554 VKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIAL-NVCGHKEALYSL 612

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
               L       +A  L E     +       +   I  LC   ++D A  +L ++    
Sbjct: 613 TFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKG 672

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
              +  ++  ++DGL +     EA EL  ++
Sbjct: 673 YWFDPASFMPVIDGLGKRGNKHEADELAEKM 703



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 146/278 (52%), Gaps = 7/278 (2%)

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S+ ++  EN  PP++  Y+ L+    K G +   S +   M+++G SP    +  ++ +L
Sbjct: 9   SLRFRFPEN--PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLL 66

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C +     A  L +KM  + C PN  +F   ++G C  G     ++LL +M++    PN 
Sbjct: 67  CDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNK 126

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             YN L+    +  +  +A +LV E+ K G+  ++VT+N  +  +C +G V+EA ++   
Sbjct: 127 VVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRD 186

Query: 471 MLIEGT----KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           M I+      + + IT+N+++  +CK+G +  A  L ++++   E   +  SY   L G+
Sbjct: 187 MQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMK-VSENLMNRESYNIWLLGL 245

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              G + EA + L++M++ G+ PN  ++N+++  L  N
Sbjct: 246 VRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKN 283



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 169/416 (40%), Gaps = 97/416 (23%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + L++ M   GV      + ++++ Y   G   +A  +   +   G  P     N +L 
Sbjct: 289 ARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLY 348

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL----------- 122
           +L  E R S    +   M   G   +  T NI++  LC N ++D A ++           
Sbjct: 349 SLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAA 408

Query: 123 LVEMGN------------KGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGV 165
           L  +GN            K C PD +SY+TI+S +CK G+V EA++     +        
Sbjct: 409 LGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDS 468

Query: 166 SVYNALINGLCKEHKIEEAFW-----------------------------------LLCE 190
           ++Y+  I+  CKE KI  AF                                    L+ E
Sbjct: 469 AIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDE 528

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY----- 245
           M +RG+ P+V  Y+ ++SSLC+ G V+ +  +L +M  +G +PNI SF+ L+K +     
Sbjct: 529 MRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACD 588

Query: 246 -----------------------------LLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                                        L+GG   +A +L+   +   F      Y  L
Sbjct: 589 FSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDL 648

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           I  LC +  +D+A  + +++ +     +  ++  +IDG  K GN   A ++  +M+
Sbjct: 649 IDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM 704


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 234/451 (51%), Gaps = 5/451 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P V  Y+ +++          +  +   M+  G++PN++TYN ++  LCK+ +VD A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
            ++L EM N+G  PD V YTT++   CKLG ++ A +L       R       Y A+I G
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC+  K+ EA  +  +M  RG++P+ +TY+T+I   C  G +E +  +  QM   G  PN
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+L  G    G+   A++L + M  +G   N+  Y++L++GLC +G++ +AV +  
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +ME     P+  T++ L+D + K G ++ A ++   M+  G  P V+ +  ++   C + 
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M      L+  M  +   PNT T+N+ +K  C    +    ++   M     +P+  TYN
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G  +   +KEA+ L  E+ + G  L   +YN+I+ G  +   + EA +L  +M  E
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           G   DA  +N+ +     +G +  A++L D 
Sbjct: 425 GMAADAEIYNLFVDISYGEGNMETALELCDE 455



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 230/438 (52%), Gaps = 6/438 (1%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHK 180
           M  +G APD VSY+T+++  C  G++++     +E+ M+     +  YN++I  LCK  K
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++A  +L EM+++GI P+ + Y+T+I   C +GN++ +  +  +M  +   P+  ++T+
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++ G    G+  EA  ++N+M   G  P+ V Y+TLI G C +G M++A S+  QM ++ 
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV TY+AL DG  K G +  A+++ + M   G   N+  Y  +V  LC++    QA 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            L+E+M      P+T+TF T +   C  G +  A +LL +M      P + T+N L++G 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                +++   L+  + + GI  N  TYN+++   C    +    ++   M   G   D+
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+NI+I  +CK   +  A  L   +   G +N    SY S++ G      + EA    +
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKG-FNLTASSYNSIIKGFFKKKKISEARELFE 419

Query: 541 KMLNEGICPNFATWNVLV 558
           +M  EG+  +   +N+ V
Sbjct: 420 EMRREGMAADAEIYNLFV 437



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 203/366 (55%), Gaps = 1/366 (0%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           RG  P+V++YST+I+  C  G ++  L ++ +M ++G  PN++++ S++      G+  +
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  +   MI +G +P+ V Y+TLI G C  G++  A  +  +ME+    P+   Y+A+I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G  + G ++ A +++N+M S G  P+ V YT ++   C++    +A SL  +M      P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N VT+     GLC  G+VD A +LL +M       NI TYN L++GL +   +++A +L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E+E  G+  + +T+ T++   C+ G +V+A +LL +ML  G +   ITFN+++  +C  
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G + +  +LL  +   G   P+  +Y SL+   C    M+      + M   G+ P+  T
Sbjct: 304 GMLEDGERLLAWMLEKG-IMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNT 362

Query: 554 WNVLVR 559
           +N+L++
Sbjct: 363 YNILIK 368



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 219/436 (50%), Gaps = 6/436 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+  V  L+Q+M+++G+  +   + S+I    + G  + A ++   +   G+ P   +Y 
Sbjct: 25  ELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYT 84

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D             ++  M++  + P+   Y  ++  LC+  ++  A K+  +M ++
Sbjct: 85  TLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSR 144

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           G  PD V+YTT++   CK G++E+A  L  +         V  Y AL +GLCK  +++ A
Sbjct: 145 GVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTA 204

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM  +G+  N+ TY+++++ LC  GN+  ++ ++ +M V G  P+  +FT+L+  
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDA 264

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +A +L   M+  G  P V+ ++ L++G C +G +++   +   M E    PN
Sbjct: 265 YCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            TTY++L+  +    N+   ++I+  M + G  P+   Y  ++K  C+     +A  L +
Sbjct: 325 TTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHK 384

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +MA +       ++N+ IKG     ++  A +L ++M++     +   YN  +D      
Sbjct: 385 EMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEG 444

Query: 425 RVKEAFELVTE-IEKC 439
            ++ A EL  E IE C
Sbjct: 445 NMETALELCDEAIENC 460


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 249/462 (53%), Gaps = 12/462 (2%)

Query: 106 LLKALCKNNR--VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR--- 160
            L  L KN +  V   +  L+  G++ CA   ++   +++ +  L ++  A E+  R   
Sbjct: 100 FLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNL-EIHSACEVFRRVQD 158

Query: 161 --FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
             F   ++  N L++ L K ++  E  ++  EM+ R I PN+ T++  I+ LC  G +  
Sbjct: 159 YGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNK 218

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLL---GGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  ++  +   G +PNI ++ +L+ G+      G+ + A  +   M+     PN + ++T
Sbjct: 219 AEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNT 278

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI G C + ++  A +   +M+     PN+ TY++LI+G +  G L  A  +W++M+  G
Sbjct: 279 LIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN+V +  ++   C+  M  +A  L + +A ++  PN +TFNT I   C  G ++   
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGF 398

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L + M      PN++TYN L+ GL R   V+ A +L+ E+E   ++ ++VTYN ++ G 
Sbjct: 399 ALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGW 458

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+ G   +A +LLG+ML  G K + +T+N ++  YC +G +  A+++  ++   G+   +
Sbjct: 459 CKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK-RAN 517

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +++Y  L+ G C +G +++A   L +ML +G+ PN  T++V+
Sbjct: 518 VVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 213/416 (51%), Gaps = 8/416 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++  ++  G + ++ + N LL AL K N       +  EM  +   P+  ++   ++ +C
Sbjct: 152 VFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLC 211

Query: 147 KLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH---KIEEAFWLLCEMVDRGIDP 198
           K G++ +A ++     A  F   +  YN LI+G CK+    K+  A  +L EM+   I P
Sbjct: 212 KAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICP 271

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N IT++T+I   C   NV  +     +M  +G  PNI ++ SL+ G    G+  EA  LW
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           ++M+  G  PN+V ++ LI+G C    + EA  +   + E    PN  T++ +ID F KA
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +     + N M+  G  PNV  Y C++  LC+N     A  L+ +M       + VT+
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTY 451

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G C  G    A KLL +M      PN  TYN L+DG      +K A ++ T++EK
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            G + N+VTYN ++ G C+ G + +A +LL +ML +G   +  T++++     ++G
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 234/454 (51%), Gaps = 11/454 (2%)

Query: 76  LAENRFSMINPIYSNMKRDGMEP--NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           L +N    ++ ++ ++   G  P  N    ++L+ A   N  +  A ++   + + G   
Sbjct: 104 LVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKL 163

Query: 134 DAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
              S   ++S++ K  +  E +      +  R    ++ +N  INGLCK  K+ +A  ++
Sbjct: 164 SLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVI 223

Query: 189 CEMVDRGIDPNVITYSTIISSLC---DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            ++   G  PN++TY+T+I   C     G +  +  IL +M      PN  +F +L+ G+
Sbjct: 224 EDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGF 283

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                   A + +  M R+G  PN+V Y++LI+GL +NG +DEA+++  +M      PN+
Sbjct: 284 CKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNI 343

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ALI+GF K   +  A ++++ +      PN + +  M+   C+  M  +  +L   
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  E   PN  T+N  I GLC    V  A KLL++M+ YE   ++ TYN L+ G  +   
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGE 463

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             +A +L+ E+   G++ N VTYNT++ G C  G +  A ++  +M  EG + + +T+N+
Sbjct: 464 PSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNV 523

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
           +I  +CK GK+ +A +LL+ +   G  NP+  +Y
Sbjct: 524 LIKGFCKTGKLEDANRLLNEMLEKG-LNPNRTTY 556



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 219/421 (52%), Gaps = 8/421 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A ++F R++++G K ++   N +L AL+  N    +  +Y  M +  ++PN+ T+NI + 
Sbjct: 149 ACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFIN 208

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE--------ARELAMR 160
            LCK  +++ A  ++ ++   G +P+ V+Y T++   CK G   +           LA +
Sbjct: 209 GLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK 268

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
                  +N LI+G CK+  +  A     EM  +G+ PN++TY+++I+ L + G ++ ++
Sbjct: 269 ICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAI 328

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  +M   G  PNI +F +L+ G+       EA  L++ +  +  +PN + ++T+I   
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAF 388

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G M+E  ++   M +    PNV+TY+ LI G  +  N+  A ++ N M +     +V
Sbjct: 389 CKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADV 448

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++   C++    +A  L+ +M      PN VT+NT + G C  G +  A+K+  Q
Sbjct: 449 VTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQ 508

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++     N+ TYN L+ G  +  ++++A  L+ E+ + G+  N  TY+ +   +   G 
Sbjct: 509 MEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGF 568

Query: 461 V 461
           +
Sbjct: 569 I 569



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 194/392 (49%), Gaps = 5/392 (1%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           +I  A  +   + D G   ++ + + ++S+L           +  +M  R   PN+ +F 
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS---MDEAVSVSYQM 296
             + G    G+ ++A D+   +   GF PN+V Y+TLI G C  GS   M  A ++  +M
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
             N   PN  T++ LIDGF K  N+L A   +  M   G  PN+V Y  ++  L  N   
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A +L +KM      PN VTFN  I G C    +  A KL D + + + +PN  T+N +
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +D   +   ++E F L   +   GI  N+ TYN ++ G+CR   V  A +LL +M     
Sbjct: 385 IDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYEL 444

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           K D +T+NI+I  +CK G+ + A +LL  +   G   P+ ++Y +L+ G C  G ++ A 
Sbjct: 445 KADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG-VKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
               +M  EG   N  T+NVL++  F   G L
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKG-FCKTGKL 534



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 165/335 (49%), Gaps = 24/335 (7%)

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST--LIHGLCSNGSMDEAVSVS 293
           H+ +S+    LLGG    A+ L   M+       V+AY T   IH  C            
Sbjct: 110 HTVSSVFHSLLLGGDRPCANALITDML-------VLAYVTNLEIHSACE--VFRRVQDYG 160

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ-IWNRMISNGCSPNVVAYTCMVKVLCQ 352
           +++  NSC P     SAL+      GN  G  Q ++  MI     PN+  +   +  LC+
Sbjct: 161 FKLSLNSCNP---LLSALV-----KGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCK 212

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC---GCGRVDWAMKLLDQMKQYECLPN 409
               ++A  +IE +      PN VT+NT I G C     G++  A  +L +M   +  PN
Sbjct: 213 AGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPN 272

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             T+N L+DG  +   V  A     E+++ G++ NIVTYN++++G+   G + EA  L  
Sbjct: 273 EITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWD 332

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           KM+  G K + +TFN +I  +CK+  +  A +L D I    +  P+ I++ +++   C +
Sbjct: 333 KMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDI-AEQDLVPNAITFNTMIDAFCKA 391

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G M+E F     ML+EGI PN +T+N L+  L  N
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRN 426



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 148/300 (49%), Gaps = 5/300 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M    +  +E  F ++I+ + +      A   F  ++  GLKP +  YN +++ L 
Sbjct: 260 ILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS 319

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      ++  M   G++PN+ T+N L+   CK   +  A KL  ++  +   P+A+
Sbjct: 320 NNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAI 379

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ T++ + CK G +EE   L            VS YN LI GLC+   +  A  LL EM
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +  +  +V+TY+ +I   C  G    +  +LG+M   G  PN  ++ +L+ GY + G  
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  +  +M +EG   NVV Y+ LI G C  G +++A  +  +M E    PN TTY  +
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 242/457 (52%), Gaps = 14/457 (3%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           +++++NIL+K  C  +++  A     ++   G  P  V++ T++  +C   +V EA +L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 159 MRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +     V  +  L+NGLC+E ++ EA  LL  MV+ G+ PN ITY TI+  +C +G+  
Sbjct: 74  HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 218 TSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           ++L +L +M  +    P++  +++++ G    GR  +A +L+  M  +G  P++V YS +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+G CS+G   EA  +  +M      P+V T+S LI+   K G+L  A  +   MIS+G 
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-----------AFENCPPNTVTFNTFIKGL 385
            PNVV    ++  LC +     A  + + M           AF    P+  T+N  I GL
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+   A +L ++M     +P+  TY+ +++GL + +R+ EA ++   +       NI
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VT+NT++ G C+AGMV +  +L  +M   G   +AIT+  +I  + K G +N ++ +   
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQE 433

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +   G + PD I+  ++L G+ +   ++ A   L+++
Sbjct: 434 MISSGVY-PDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/440 (30%), Positives = 221/440 (50%), Gaps = 21/440 (4%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           AL  F ++ + G  PT+  +N +L  L  E+R S    ++  M +    PNV T+  L+ 
Sbjct: 34  ALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMN 89

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------G 162
            LC+  RV  A  LL  M   G  P+ ++Y TIV  +CK+G    A  L  +        
Sbjct: 90  GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIK 149

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V +Y+A+I+GL K+ +  +A  L  EM D+GI P+++TYS +I+  C  G    +  +
Sbjct: 150 PDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRL 209

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M VR  +P++ +F+ L+   +  G  + A DL   MI  G  PNVV  +TL+ GLC 
Sbjct: 210 LQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCD 269

Query: 283 NGSMDEAVSVSYQMEE-----------NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           +G + +A+ +   M++           N   P+V TY+ LI G    G  L A +++  M
Sbjct: 270 SGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 329

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G  P+ V Y+ M+  LC+ +   +A  + + M  ++  PN VTFNT I G C  G V
Sbjct: 330 PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMV 389

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D  ++L  +M +   + N  TY  L+ G  +V  +  + ++  E+   G+  + +T   +
Sbjct: 390 DDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNM 449

Query: 452 LHGVCRAGMVVEAFQLLGKM 471
           L G+     +  A  +L ++
Sbjct: 450 LTGLWSKEELKRALAMLEEL 469



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 222/426 (52%), Gaps = 19/426 (4%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N LI   C   K+  A     ++   G  P ++T++T++  LC    V  +L +  QM 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM- 76

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
              C PN+ +FT+L+ G    GR  EA  L +RM+ +G  PN + Y T++ G+C  G   
Sbjct: 77  ---CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 288 EAVSVSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            A+++  +MEE S   P+V  YSA+IDG  K G    A  ++  M   G  P++V Y+CM
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C +  + +A  L+++M      P+ VTF+  I  L   G ++ A  LL +M     
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKC-----------GIQLNIVTYNTILHGV 455
            PN+ T N LLDGL    ++K+A E+   ++K            G++ ++ TYN ++ G+
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
              G  +EA +L  +M   G   D +T++ +I   CKQ +++ A Q+ D + G   ++P+
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM-GSKSFSPN 372

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVYIL 574
           I+++ +L+ G C +G + +      +M   GI  N  T+  L+R  F  +G++ G + I 
Sbjct: 373 IVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG-FRKVGNINGSLDIF 431

Query: 575 DDIMAN 580
            +++++
Sbjct: 432 QEMISS 437



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 194/372 (52%), Gaps = 17/372 (4%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           ++ +++ +I   C    +  +L   G++   G +P + +F +LL G  +  R  EA DL+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           ++M +    PNVV ++TL++GLC  G + EAV++  +M E+   PN  TY  ++DG  K 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 319 GNLLGASQIWNRMIS-NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           G+ + A  +  +M   +   P+VV Y+ ++  L ++     A +L  +M  +   P+ VT
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++  I G C  G+   A +LL +M   +  P++ T++ L++ L++   +  A +L+ E+ 
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM-----------LIEGTKLDAITFNII 486
             G+  N+VT NT+L G+C +G + +A ++   M              G + D  T+NI+
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I     +GK   A +L + +   G   PD ++Y+S++ G+C    + EA      M ++ 
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRG-IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368

Query: 547 ICPNFATWNVLV 558
             PN  T+N L+
Sbjct: 369 FSPNIVTFNTLI 380



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 192/388 (49%), Gaps = 17/388 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-NRFSMINPIYSN 90
            F +++N   R G   +A+ +  R+ E GL+P    Y  I+D +    +  S +N +   
Sbjct: 83  TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 142

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
            +   ++P+V  Y+ ++  L K+ R   A  L +EM +KG  PD V+Y+ +++  C  G+
Sbjct: 143 EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGK 202

Query: 151 VEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA+      L  +    V  ++ LIN L KE  +  A  LL EM+  G+ PNV+T +T
Sbjct: 203 WSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNT 262

Query: 206 IISSLCDVGNVETSLGILGQM-----------FVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           ++  LCD G ++ +L +   M              G  P++ ++  L+ G +  G+  EA
Sbjct: 263 LLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEA 322

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
            +L+  M   G +P+ V YS++I+GLC    +DEA  +   M   S  PN+ T++ LI G
Sbjct: 323 EELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITG 382

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           + KAG +    +++  M   G   N + Y  +++   +    + +  + ++M      P+
Sbjct: 383 YCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPD 442

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           T+T    + GL     +  A+ +L++++
Sbjct: 443 TITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 193/407 (47%), Gaps = 21/407 (5%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +AL +F+++     KP V  +  +++ L  E R      +   M  DG++PN  TY  ++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 108 KALCKNNRVDGAYKLLVEMGN-KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--- 163
             +CK      A  LL +M       PD V Y+ I+  + K G+  +A+ L +       
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 164 --GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              +  Y+ +ING C   K  EA  LL EM+ R I P+V+T+S +I++L   G++ ++  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-----------GFLPNV 270
           +L +M   G  PN+ +  +LL G    G+  +A +++  M +            G  P+V
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ LI GL + G   EA  +  +M      P+  TYS++I+G  K   L  A+Q+++ 
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M S   SPN+V +  ++   C+  M      L  +M       N +T+ T I+G    G 
Sbjct: 364 MGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++ ++ +  +M      P+  T   +L GL     +K A  ++ E++
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 191/367 (52%), Gaps = 17/367 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDAL 75
           LL +M  +G+  ++  + ++++   ++G    AL +  ++ E   +KP V IY+ I+D L
Sbjct: 103 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGL 162

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + R +    ++  M+  G+ P++ TY+ ++   C + +   A +LL EM  +  +PD 
Sbjct: 163 WKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDV 222

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCE 190
           V+++ +++++ K G +  A++L     S      V   N L++GLC   K+++A  +   
Sbjct: 223 VTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKA 282

Query: 191 M------VD-----RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           M      +D      G++P+V TY+ +IS L + G    +  +  +M  RG  P+  +++
Sbjct: 283 MQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYS 342

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           S++ G     R  EA+ +++ M  + F PN+V ++TLI G C  G +D+ + +  +M   
Sbjct: 343 SMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR 402

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
               N  TY  LI GF K GN+ G+  I+  MIS+G  P+ +    M+  L       +A
Sbjct: 403 GIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 462

Query: 360 HSLIEKM 366
            +++E++
Sbjct: 463 LAMLEEL 469



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 173/339 (51%), Gaps = 15/339 (4%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +I+SF  L+K +    +   A   + ++ + GF P +V ++TL+HGLC    + EA+ + 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           +QM    C PNV T++ L++G  + G ++ A  + +RM+ +G  PN + Y  +V  +C+ 
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 354 NMFHQAHSLIEKMA-FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                A +L+ KM    +  P+ V ++  I GL   GR   A  L  +M+     P+I T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ +++G     +  EA  L+ E+    I  ++VT++ +++ + + G +  A  LL +M+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQL----------LDRIRGGGEWNPDIISYTSL 522
             G   + +T N ++   C  GK+ +A+++          +D         PD+ +Y  L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + G+ N G   EA    ++M + GI P+  T++ ++  L
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGL 348



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 10/263 (3%)

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           P ++ +++ LI  F     L  A   + ++   G  P +V +  ++  LC  +   +A  
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M    C PN VTF T + GLC  GRV  A+ LLD+M +    PN  TY  ++DG+ 
Sbjct: 72  LFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 422 RVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           ++     A  L+ ++E+   I+ ++V Y+ I+ G+ + G   +A  L  +M  +G   D 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDR--IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           +T++ +I  +C  GK + A +LL    +R   + +PD+++++ L+  +   G +  A   
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVR---KISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
           LQ+M++ G+CPN  T N L+  L
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGL 267



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 141/299 (47%), Gaps = 16/299 (5%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q L  +M+ +G+      +  +IN +   G   +A ++   +    + P V  ++ +++A
Sbjct: 172 QNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINA 231

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK----- 129
           L+ E   +    +   M   G+ PNV T N LL  LC + ++  A ++   M        
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291

Query: 130 ------GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKE 178
                 G  PD  +Y  ++S +   G+  EA EL               Y+++INGLCK+
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            +++EA  +   M  +   PN++T++T+I+  C  G V+  L +  +M  RG   N  ++
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
            +L++G+   G  + + D++  MI  G  P+ +    ++ GL S   +  A+++  +++
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           P +  +FN  IK  C C ++ +A+    ++ +    P + T+N LL GL   +RV EA +
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L  ++ K     N+VT+ T+++G+CR G VVEA  LL +M+ +G + + IT+  I+   C
Sbjct: 72  LFHQMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G   +A+ LL ++       PD++ Y++++ G+   G   +A     +M ++GI P+ 
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187

Query: 552 ATWNVLVRSLFSN 564
            T++ ++    S+
Sbjct: 188 VTYSCMINGFCSS 200



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 67/126 (53%), Gaps = 7/126 (5%)

Query: 438 KCGIQL--NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           K G+Q+  +I ++N ++   C    +  A    GK+   G     +TFN +++  C + +
Sbjct: 6   KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V+ A+ L  ++       P+++++T+L+ G+C  G + EA   L +M+ +G+ PN  T+ 
Sbjct: 66  VSEALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 120

Query: 556 VLVRSL 561
            +V  +
Sbjct: 121 TIVDGM 126


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 272/582 (46%), Gaps = 42/582 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+  GV+ +      +     R G      K+F  +   G  P    +N ++    
Sbjct: 209 ILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFC 268

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    +   +   M +   EP+V++YNI++ A C   +   A  LL  M   GC P   
Sbjct: 269 RKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIA 328

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ TI+ + CK G VE AR+       M       VYN +I+G  K   I +A  L  EM
Sbjct: 329 TFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEM 388

Query: 192 VDRGIDPNVITYSTII---------------------------SSLCDV--------GNV 216
             + I P+ IT++T++                           SSLCDV        G  
Sbjct: 389 RTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRY 448

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++ +L  +  +G  P++ +F S++  Y   G    A   +  M++ G  P+    S+L
Sbjct: 449 DEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSL 508

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  L   GS+DEA    Y M +   P     ++ L+DG+ + G +  A  +WN M   G 
Sbjct: 509 LISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGV 568

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ VA+   +  LC + +   A+ +   M  +   PN   +N+ I G C  G+++ A+K
Sbjct: 569 FPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALK 628

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+ +M +   LP+I T N ++ GL +  R+K A E   ++ + G+  +IVTYNT++ G C
Sbjct: 629 LVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYC 688

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +A  V  A  L+ KM   G + D  T+NI I+ YC   K+N A+ +L+ +   G   P+ 
Sbjct: 689 KAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG-IVPNT 747

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++Y +++  +CN   +  A I   K+L     PN  T NVL+
Sbjct: 748 VTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLL 788



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 224/490 (45%), Gaps = 6/490 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL  M   G   S   F ++I+++ + G  E A K F  I + GL     +YN ++   
Sbjct: 313 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 372

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +     S  N ++  M+   + P+  T+N L+    +  + +   +LL ++   G   D+
Sbjct: 373 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 432

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCE 190
                 V+ +C  G+ +EA +L            V  +N++I         E AF+    
Sbjct: 433 SLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 492

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV  G+ P+  T S+++ SL   G+++ +   L  M  +G      +FT LL GY   G 
Sbjct: 493 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 552

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            + A  LWN M   G  P+ VA++  I+GLC +G M +A  V   M      PN   Y++
Sbjct: 553 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 612

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI GF K G L  A ++   M   G  P++     ++  LC+      A      M    
Sbjct: 613 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+NT I G C    V  A  L+ +M      P++TTYN  + G   V ++  A 
Sbjct: 673 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 732

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++ E+   GI  N VTYNT+++ VC   ++  A  L  K+L      + +T N+++  +
Sbjct: 733 MILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQF 791

Query: 491 CKQGKVNNAI 500
           CKQG    AI
Sbjct: 792 CKQGMPEKAI 801



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 194/433 (44%), Gaps = 36/433 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           + S  SV + L+    K     EA  +L +M + G+ PN    S +   L   G+     
Sbjct: 183 YESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVW 242

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            + G +  +G  PN  +F  L+  +   G T     L + M +    P+V +Y+ +I+  
Sbjct: 243 KLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINAN 302

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G    A+ +   M EN C P++ T+  +ID F K GN+  A + ++ +   G S N 
Sbjct: 303 CLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNT 362

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF------------------- 381
           + Y  M+    +     QA+ L E+M  ++  P+ +TFNT                    
Sbjct: 363 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 422

Query: 382 ----------------IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
                           + GLC  GR D AMKLL+ + +    P++  +N ++        
Sbjct: 423 LSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGL 482

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            + AF     + K G+  +  T +++L  + R G + EA+  L  M+ +G  +  + F +
Sbjct: 483 EERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTV 542

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           ++  Y + G VN A  L + ++G G + PD +++ + + G+C SG M +A+     ML +
Sbjct: 543 LLDGYFRIGAVNMAESLWNEMKGRGVF-PDAVAFAAFINGLCISGLMTDAYDVFSDMLRK 601

Query: 546 GICPNFATWNVLV 558
           G  PN   +N L+
Sbjct: 602 GFVPNNFVYNSLI 614



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 164/354 (46%), Gaps = 8/354 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D    LL+ +  +G+  S   F S+I +Y   GL E+A   +  + +FGL P+    + +
Sbjct: 449 DEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSL 508

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L +L+ +           +M   G       + +LL    +   V+ A  L  EM  +G 
Sbjct: 509 LISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGV 568

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            PDAV++   ++ +C  G + +A +     L   F     VYN+LI G CK  K+ EA  
Sbjct: 569 FPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALK 628

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L+ EM  RG+ P++ T + II  LC  G ++ ++     M   G +P+I ++ +L+ GY 
Sbjct: 629 LVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYC 688

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                  A DL  +M   G+ P++  Y+  IHG C+   ++ AV +  ++      PN  
Sbjct: 689 KAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTV 748

Query: 307 TYSALIDGFAKAGNLLGASQIWN-RMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           TY+ +I+       +L  + I   +++     PN V    ++   C+  M  +A
Sbjct: 749 TYNTMINAVCNV--ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 800



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 6/312 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L  K  +D     L  M  +G   +   F  +++ Y R+G    A  ++  ++  G+ P 
Sbjct: 512 LVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPD 571

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              +   ++ L      +    ++S+M R G  PN F YN L+   CK  +++ A KL+ 
Sbjct: 572 AVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVR 631

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGLCKEH 179
           EM  +G  PD  +   I+  +CK G+++ A E  M   R G    +  YN LI+G CK  
Sbjct: 632 EMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAF 691

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            +  A  L+ +M D G +P++ TY+  I   C V  +  ++ IL ++   G  PN  ++ 
Sbjct: 692 DVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYN 751

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +++         H A  L  ++++  F+PN V  + L+   C  G  ++A+    ++ E 
Sbjct: 752 TMINAVCNVILDH-AMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEI 810

Query: 300 SCPPNVTTYSAL 311
               + TT+  +
Sbjct: 811 HLDFDETTHKLM 822


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 263/533 (49%), Gaps = 6/533 (1%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           ++S R V   + AL  ++++      P VK +N +   +     ++    +  +M   G+
Sbjct: 50  LDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGV 109

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +PNV T+NI++  LC+ N     + +L  M   G  P  V++TTIV+ +C  G V +A  
Sbjct: 110 KPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIR 169

Query: 157 LA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                  M + S      A+INGLCK      A   L +M ++  + +V  Y+ ++  LC
Sbjct: 170 FVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLC 229

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G V  +  +  QM  +G  P++ ++  L+ G     R  EA+ L   M+R+G +P+V 
Sbjct: 230 KDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQ 289

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++ +       G +  A S+   M       +V TYS++I        +  A ++++ M
Sbjct: 290 TFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLM 349

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           I  GC PN+V YT ++   C+    ++A   + +M      PN VT+NT I G C  G+ 
Sbjct: 350 IRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKP 409

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A +L   M ++  LP++ T   +LDGL + +   EA  L  E+EK    L+I+ Y+ I
Sbjct: 410 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 469

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L+G+C +G + +A +L   +  +G K+D +T+NI+I   CK+G +++A  LL ++   G 
Sbjct: 470 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG- 528

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             PD  +Y   + G+     + ++  YL  M  +G   N  T  +L+    +N
Sbjct: 529 CPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN 581



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 245/492 (49%), Gaps = 6/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++ M   GV  +      VIN   R+        +   + + G++P++  +  I++ L 
Sbjct: 100 LIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLC 159

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   +       ++K  G E + +T   ++  LCK      A   L +M  + C  D  
Sbjct: 160 VEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVT 219

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +V  +CK G V EA +L  +  G G+      YN LI+GLC   + +EA  LL  M
Sbjct: 220 AYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 279

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +GI P+V T++ I       G +  +  I   M   G   ++ +++S++  + +  + 
Sbjct: 280 MRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQM 339

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A ++++ MIR+G LPN+V Y++LIHG C   +M++A+    +M  N   PN+ T++ L
Sbjct: 340 KDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTL 399

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF KAG  + A +++  M  +G  P++     ++  L + +   +A SL  ++   N 
Sbjct: 400 IGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNS 459

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + + ++  + G+C  G+++ A++L   +       ++ TYN +++GL +   + +A +
Sbjct: 460 DLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAED 519

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ ++E+ G   +  TYN  + G+ R   + ++ + L  M  +G + +A T  ++I  Y 
Sbjct: 520 LLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLI-NYF 578

Query: 492 KQGKVNNAIQLL 503
              K N A Q+ 
Sbjct: 579 SANKENRAFQVF 590



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 13/276 (4%)

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           T+ +  +D      ++  A   +++M++    P V  +  +  ++ +   +  A SLI+ 
Sbjct: 44  TSRAQFLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKH 103

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M++    PN  T N  I  LC      +   +L  M +    P+I T+  +++GL     
Sbjct: 104 MSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGN 163

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           V +A   V  ++  G + +  T   I++G+C+ G    A   L KM  +   LD   +N 
Sbjct: 164 VAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNA 223

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           ++   CK G V  A  L  ++ G G   PD+ +Y  L+ G+CN    +EA   L  M+ +
Sbjct: 224 VVDGLCKDGMVFEAWDLFSQMTGKG-IQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRK 282

Query: 546 GICPNFATWNVL------------VRSLFSNLGHLG 569
           GI P+  T+NV+             +S+FS +GH+G
Sbjct: 283 GIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMG 318



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 100/208 (48%), Gaps = 8/208 (3%)

Query: 9   CEI---DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           CEI   +   Y L +M   G+  +   + ++I  + + G    A ++F+ + + G  P +
Sbjct: 369 CEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDL 428

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
           +    ILD L   +  S    ++  +++   + ++  Y+I+L  +C + +++ A +L   
Sbjct: 429 QTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSY 488

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHK 180
           + +KG   D V+Y  +++ +CK G +++A +L M+            YN  + GL + ++
Sbjct: 489 LSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYE 548

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           I ++   L  M  +G   N  T   +I+
Sbjct: 549 ISKSTKYLMFMKGKGFRANATTTKLLIN 576


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/582 (27%), Positives = 272/582 (46%), Gaps = 42/582 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+  GV+ +      +     R G      K+F  +   G  P    +N ++    
Sbjct: 240 ILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFC 299

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    +   +   M +   EP+V++YNI++ A C   +   A  LL  M   GC P   
Sbjct: 300 RKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIA 359

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ TI+ + CK G VE AR+       M       VYN +I+G  K   I +A  L  EM
Sbjct: 360 TFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEM 419

Query: 192 VDRGIDPNVITYSTII---------------------------SSLCDV--------GNV 216
             + I P+ IT++T++                           SSLCDV        G  
Sbjct: 420 RTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRY 479

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++ +L  +  +G  P++ +F S++  Y   G    A   +  M++ G  P+    S+L
Sbjct: 480 DEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSL 539

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  L   GS+DEA    Y M +   P     ++ L+DG+ + G +  A  +WN M   G 
Sbjct: 540 LISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGV 599

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ VA+   +  LC + +   A+ +   M  +   PN   +N+ I G C  G+++ A+K
Sbjct: 600 FPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALK 659

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+ +M +   LP+I T N ++ GL +  R+K A E   ++ + G+  +IVTYNT++ G C
Sbjct: 660 LVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYC 719

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +A  V  A  L+ KM   G + D  T+NI I+ YC   K+N A+ +L+ +   G   P+ 
Sbjct: 720 KAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG-IVPNT 778

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++Y +++  +CN   +  A I   K+L     PN  T NVL+
Sbjct: 779 VTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLL 819



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 226/490 (46%), Gaps = 6/490 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL  M   G   S   F ++I+++ + G  E A K F  I + GL     +YN ++   
Sbjct: 344 HLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGY 403

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +     S  N ++  M+   + P+  T+N L+    +  + +   +LL ++   G   D+
Sbjct: 404 VKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDS 463

Query: 136 VSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
                 V+ +C  G+ +EA +L     G G+      +N++I         E AF+    
Sbjct: 464 SLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGI 523

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV  G+ P+  T S+++ SL   G+++ +   L  M  +G      +FT LL GY   G 
Sbjct: 524 MVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGA 583

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            + A  LWN M   G  P+ VA++  I+GLC +G M +A  V   M      PN   Y++
Sbjct: 584 VNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNS 643

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI GF K G L  A ++   M   G  P++     ++  LC+      A      M    
Sbjct: 644 LIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 703

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+NT I G C    V  A  L+ +M      P++TTYN  + G   V ++  A 
Sbjct: 704 LSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAV 763

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++ E+   GI  N VTYNT+++ VC   ++  A  L  K+L      + +T N+++  +
Sbjct: 764 MILEELISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQF 822

Query: 491 CKQGKVNNAI 500
           CKQG    AI
Sbjct: 823 CKQGMPEKAI 832



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 193/433 (44%), Gaps = 36/433 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           + S  SV + L+    K     EA  +L +M + G+ PN    S +   L   G+     
Sbjct: 214 YESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVW 273

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            + G +  +G  PN  +F  L+  +   G T     L + M +    P+V +Y+ +I+  
Sbjct: 274 KLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINAN 333

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G    A+ +   M EN C P++ T+  +ID F K GN+  A + ++ +   G S N 
Sbjct: 334 CLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNT 393

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF------------------- 381
           + Y  M+    +     QA+ L E+M  ++  P+ +TFNT                    
Sbjct: 394 IVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRD 453

Query: 382 ----------------IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
                           + GLC  GR D AMKLL+ +      P++  +N ++        
Sbjct: 454 LSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGL 513

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            + AF     + K G+  +  T +++L  + R G + EA+  L  M+ +G  +  + F +
Sbjct: 514 EERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTV 573

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           ++  Y + G VN A  L + ++G G + PD +++ + + G+C SG M +A+     ML +
Sbjct: 574 LLDGYFRIGAVNMAESLWNEMKGRGVF-PDAVAFAAFINGLCISGLMTDAYDVFSDMLRK 632

Query: 546 GICPNFATWNVLV 558
           G  PN   +N L+
Sbjct: 633 GFVPNNFVYNSLI 645



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 164/354 (46%), Gaps = 8/354 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D    LL+ +  +G+  S   F S+I +Y   GL E+A   +  + +FGL P+    + +
Sbjct: 480 DEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSL 539

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L +L+ +           +M   G       + +LL    +   V+ A  L  EM  +G 
Sbjct: 540 LISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGV 599

Query: 132 APDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            PDAV++   ++ +C  G + +A +     L   F     VYN+LI G CK  K+ EA  
Sbjct: 600 FPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALK 659

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L+ EM  RG+ P++ T + II  LC  G ++ ++     M   G +P+I ++ +L+ GY 
Sbjct: 660 LVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYC 719

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                  A DL  +M   G+ P++  Y+  IHG C+   ++ AV +  ++      PN  
Sbjct: 720 KAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTV 779

Query: 307 TYSALIDGFAKAGNLLGASQIWN-RMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           TY+ +I+       +L  + I   +++     PN V    ++   C+  M  +A
Sbjct: 780 TYNTMINAVCNV--ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 831



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 6/312 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L  K  +D     L  M  +G   +   F  +++ Y R+G    A  ++  ++  G+ P 
Sbjct: 543 LVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPD 602

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              +   ++ L      +    ++S+M R G  PN F YN L+   CK  +++ A KL+ 
Sbjct: 603 AVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVR 662

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---RFG--SGVSVYNALINGLCKEH 179
           EM  +G  PD  +   I+  +CK G+++ A E  M   R G    +  YN LI+G CK  
Sbjct: 663 EMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAF 722

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            +  A  L+ +M D G +P++ TY+  I   C V  +  ++ IL ++   G  PN  ++ 
Sbjct: 723 DVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYN 782

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +++         H A  L  ++++  F+PN V  + L+   C  G  ++A+    ++ E 
Sbjct: 783 TMINAVCNVILDH-AMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEI 841

Query: 300 SCPPNVTTYSAL 311
               + TT+  +
Sbjct: 842 HLDFDETTHKLM 853


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 235/479 (49%), Gaps = 4/479 (0%)

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N +LD L    R   I  ++  +     +PN  +Y  L+KALC+  ++D A   + EM  
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWL 187
           +   PD  +Y  ++ ++CK  ++  A E         V  YN L+ GLCK  ++ +A  L
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSL 123

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
              M   GI P+ +TY+T+I   C +   ET+ G+L  M  R C+P ++S+ S++ G   
Sbjct: 124 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 183

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             +  +A  L+  M   G  P+ V Y+TLIHGLC    + EA  +   M EN   P+  T
Sbjct: 184 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKIT 243

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           ++ALI+G      +  A  ++  M   GC+P++V +T +V  LC       A S++    
Sbjct: 244 FTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRN-- 301

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
           +  CP   + +    + L      D A +LL +M +    PN+ TY     GL       
Sbjct: 302 YPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGM 361

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A+     + + GI+ ++V YN ++ G C+A  +  A +++  M   G   + +T+N ++
Sbjct: 362 RAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLV 421

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
             +C++GKV    +LL  +   G   PD+ ++++L+ G+   G    A+ +L   +++G
Sbjct: 422 GHHCRKGKVEAIGELLHTMVSRGR-QPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 237/480 (49%), Gaps = 21/480 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++++   R   +EQ + +F RI     KP    Y +++ AL    +        + M R+
Sbjct: 5   ALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMARE 64

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            + P+VFTYN+++  LCK  R+  A +    M      PD V+Y T++  +CK G+V +A
Sbjct: 65  KLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQA 120

Query: 155 RELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L     G+G++     Y  LI+  CK  + E A+ LL  M  R   P V +Y +II+ 
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC    V+ +  +  +M + GC P+  ++ +L+ G  +  R HEA DL   M+  GF P+
Sbjct: 181 LCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPD 240

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            + ++ LI GLC+   + EA  +   M +  C P++ T++ L+        L  A  +  
Sbjct: 241 KITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVR 300

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
                 C   V+ YT + + L +   F +A  L++KMA    PPN VT+  F KGL    
Sbjct: 301 NY--PACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLG--- 355

Query: 390 RVDW-----AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
             DW     A +   +M +    P++  YN L+DG  + +R+  A ++V  +++ G+  N
Sbjct: 356 --DWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPN 413

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           IVTYNT++   CR G V    +LL  M+  G + D  T++ ++      G+ + A   L+
Sbjct: 414 IVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLN 473



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 230/467 (49%), Gaps = 14/467 (2%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
           T N LL  L +  R +    +   + ++ C P+A+SY  +V ++C+ G++++A     E+
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 158 AM-RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           A  +    V  YN +I+ LCK  +I  A     E  +   +P+V+TY+T++  LC  G V
Sbjct: 62  AREKLVPDVFTYNVVIDTLCKARRISRAI----EFFETMPEPDVVTYNTLLGGLCKNGRV 117

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  + G M   G  P+  ++T+L+  +    +   A  L   M      P V +Y ++
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSI 177

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+GLC N  +D+A  +  +M+   C P+  TY+ LI G      L  A  +   M+ NG 
Sbjct: 178 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGF 237

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ + +T +++ LC  +   +A  L + MA + C P+ VT    +  LC   ++  A+ 
Sbjct: 238 QPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALS 297

Query: 397 LLDQMKQYECLPN-ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++   + Y   P  +  Y  +   L R      A  L+ ++ + G+  N+VTY     G+
Sbjct: 298 VV---RNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL 354

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
                 + A++   +ML +G + D + +N+++  +CK  +++ A +++  +   G   P+
Sbjct: 355 GDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSG-LPPN 413

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           I++Y +L+   C  G ++     L  M++ G  P+ ATW+ LV  LF
Sbjct: 414 IVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLF 460



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 203/438 (46%), Gaps = 11/438 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L    +ID     + +M  E +      +  VI++  +     +A++ F  + E  
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 98

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +L  L    R +    ++ +M+  G+ P+  TY  L+   CK  + + AY
Sbjct: 99  --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGL 175
            LL  M ++ C+P   SY +I++ +CK  +V++A +L   M+          YN LI+GL
Sbjct: 157 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C + ++ EA  LL  MV+ G  P+ IT++ +I  LC    ++ +  +   M  +GC P++
Sbjct: 217 CVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 276

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + T L+    +  +   A  +            V+ Y+ +   L      D A  +  +
Sbjct: 277 VTHTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQK 334

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M     PPNV TY+A   G       + A + + RM+  G  P++VAY  +V   C+ + 
Sbjct: 335 MARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADR 394

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  ++  M     PPN VT+NT +   C  G+V+   +LL  M      P++ T++ 
Sbjct: 395 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWST 454

Query: 416 LLDGLLRVNRVKEAFELV 433
           L+ GL  V +   A+  +
Sbjct: 455 LVAGLFMVGQADAAYSFL 472



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 171/361 (47%), Gaps = 7/361 (1%)

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +T + ++  L      E  + +  ++F + C PN  S+  L+K     G+  +A      
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M RE  +P+V  Y+ +I  LC    +  A+     M E    P+V TY+ L+ G  K G 
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A  ++  M   G +P+ V YT ++ V C+   F  A+ L++ MA   C P   ++ +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLC   +VD A +L ++MK   C P+  TYN L+ GL    R+ EA +L+T + + G
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
            Q + +T+  ++ G+C    + EAF L   M  +G   D +T  +++   C   K+  A+
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +   +R        +I YT +   +    G   A   LQKM   G+ PN  T+    + 
Sbjct: 297 SV---VRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKG 353

Query: 561 L 561
           L
Sbjct: 354 L 354



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 156/338 (46%), Gaps = 3/338 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   + C+ +    LLQ M     S +   + S+IN   +    +QA ++F  ++  G
Sbjct: 142 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 201

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP    YN ++  L  + R      + + M  +G +P+  T+  L++ LC  +R+  A+
Sbjct: 202 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAF 261

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS---GVSVYNALINGLCK 177
            L   M  +GCAPD V++T +VS +C L ++  A  +   + +    V +Y  +   L +
Sbjct: 262 VLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGR 321

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
               + A  LL +M  RG+ PNV+TY+     L D      +     +M  +G  P++ +
Sbjct: 322 RRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 381

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +  L+ G+    R   A  +   M + G  PN+V Y+TL+   C  G ++    + + M 
Sbjct: 382 YNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 441

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
                P+V T+S L+ G    G    A    N  +S G
Sbjct: 442 SRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAMSQG 479


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 262/506 (51%), Gaps = 12/506 (2%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---DGAYKLL 123
           +Y  +++  + +    M    +  + + G   ++ T N +LK +   N +   D  + ++
Sbjct: 239 VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMV 298

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKE 178
           V +G K   P+ V+++T++ + CK G +++A  L  +  G+GV+    VY+ LI+GL K 
Sbjct: 299 VRIGPK---PNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKA 355

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            ++E+   LL   +D+GI  +V+ +S+ + +   +G++   + I  +M   G +PN+ S 
Sbjct: 356 GRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSC 415

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           + L+KG+   GR  EA  L+ ++++ GF P+++ YS LI G C +G++ +   +   M +
Sbjct: 416 SILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIK 475

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
             C P+   YS LI+G  K G +  A + + + ++ G SPNV     ++   C+      
Sbjct: 476 KRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVG 535

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  +   M   N   +TVT+   IKG    GRVD A+ L  QM + +  P++ TY  L+D
Sbjct: 536 AMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLID 595

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL ++ +      +   + K  +  +I  YN +++   R G +  A  L   ++  G K 
Sbjct: 596 GLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKP 655

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           D  TFN +I  YC   ++++A+QL  ++    +  P+ I++T L+   C  G M +A + 
Sbjct: 656 DVFTFNTMICCYCNFKRLDDAVQLFAKMT-SEQLRPNAITFTILIDAFCREGRMDDAMLM 714

Query: 539 LQKMLNEGICPNFATWNVLVRSLFSN 564
             KML EG  PN  T++ L+   F +
Sbjct: 715 FSKMLEEGPEPNLVTYSCLIHGYFKS 740



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 154/622 (24%), Positives = 296/622 (47%), Gaps = 55/622 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K GE C           M+ +  S    V+  V+N +   G  E  L+    + + G
Sbjct: 221 IVDKYGELCS---------AMREQPFS----VYEFVMNRFMNKGEVEMGLRFHKALVQGG 267

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +   N IL  +  +N   + +  ++ + R G +PNV T++ L+ A CK   +D A+
Sbjct: 268 FGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAF 327

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGL 175
            L   M   G  PD + Y+ ++  + K G++E+ + L   A+  G  + V  +++ ++  
Sbjct: 328 VLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAY 387

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   +     +   M++ GI PNV++ S +I   C  G +  + G+  Q+   G  P+I
Sbjct: 388 VKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSI 447

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++++L+ G+   G   +   L+  MI++   P+ + YS LI+GLC  G + +A+   +Q
Sbjct: 448 LTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQ 507

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
                  PNV T + L+D F +   ++GA +++  M       + V YT ++K   Q   
Sbjct: 508 AVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGR 567

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L  +M  ++  P+ +T+ T I GLC   +    + + D M +    P+I  YN 
Sbjct: 568 VDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNV 627

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++   R   ++ A  L   + + G + ++ T+NT++   C    + +A QL  KM  E 
Sbjct: 628 LINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQ 687

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWN--------------------- 513
            + +AITF I+I A+C++G++++A+ +  + +  G E N                     
Sbjct: 688 LRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESG 747

Query: 514 -------------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
                        P+I+SY+ L+ G+C  G M+EA    +  L++ + P+   + +L+R 
Sbjct: 748 LKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRG 807

Query: 561 LFSNLGHLGPVYIL-DDIMANK 581
            +  +G L    +L D+++ N+
Sbjct: 808 -YCKVGRLTEAMMLYDNMLLNR 828



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/549 (26%), Positives = 253/549 (46%), Gaps = 45/549 (8%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           +G+A+    M  RI   G KP V  ++ ++DA   E        ++  M  +G+ P++  
Sbjct: 288 IGVADDYFNMVVRI---GPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344

Query: 103 YNILLKALCKNNRVDGAYKLLV-----------------------------------EMG 127
           Y+IL+  L K  R++   +LL+                                    M 
Sbjct: 345 YSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRML 404

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIE 182
           N+G +P+ VS + ++   C+ G++ EA     + L + F   +  Y+ALI G CK   + 
Sbjct: 405 NEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLR 464

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           + F+L  +M+ +  +P+ I YS +I+ LC  G V  +L    Q   RG +PN+ +  +LL
Sbjct: 465 DGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLL 524

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             +        A  ++  M       + V Y+ LI G    G +DEA+ + +QM +    
Sbjct: 525 DSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFK 584

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V TY  LIDG  K         I++ M  N  +P++  Y  ++ +  +      A  L
Sbjct: 585 PDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGL 644

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
              +      P+  TFNT I   C   R+D A++L  +M   +  PN  T+  L+D   R
Sbjct: 645 FVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCR 704

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA-FQLLGKMLIEGTKLDAI 481
             R+ +A  + +++ + G + N+VTY+ ++HG  ++  ++E+  +L  +ML      + +
Sbjct: 705 EGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIV 764

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           +++I+I   CK+G +  A     R        PD+I+YT L+ G C  G + EA +    
Sbjct: 765 SYSILIDGLCKRGLMKEA-SCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDN 823

Query: 542 MLNEGICPN 550
           ML   + P+
Sbjct: 824 MLLNRLTPD 832



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 8/366 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           YL + M  +       V+  +IN   + GL   AL+ F++    GL P V   N +LD+ 
Sbjct: 468 YLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSF 527

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                      +Y  M    ++ +  TY IL+K   +  RVD A  L  +M  K   PD 
Sbjct: 528 CRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDV 587

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEEAFWLLC 189
           ++Y T++  +CKL +   A      F         +++YN LIN   +E  +E A  L  
Sbjct: 588 ITYCTLIDGLCKLKK-SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFV 646

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +V+RG  P+V T++T+I   C+   ++ ++ +  +M      PN  +FT L+  +   G
Sbjct: 647 HVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREG 706

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA-VSVSYQMEENSCPPNVTTY 308
           R  +A  ++++M+ EG  PN+V YS LIHG   + SM E+ + +  +M EN+  PN+ +Y
Sbjct: 707 RMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSY 766

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LIDG  K G +  AS  +   +     P+V+AYT +++  C+     +A  L + M  
Sbjct: 767 SILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLL 826

Query: 369 ENCPPN 374
               P+
Sbjct: 827 NRLTPD 832



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 206/475 (43%), Gaps = 78/475 (16%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGI--DPNVI----------------------- 201
           VY  LI   C++   +++  +   +  +GI   PNV+                       
Sbjct: 169 VYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGEL 228

Query: 202 ----------TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                      Y  +++   + G VE  L     +   G   +I +   +LKG  +    
Sbjct: 229 CSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDI 288

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A D +N ++R G  PNVV +STLI   C  G++D+A  +   M  N   P++  YS L
Sbjct: 289 GVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSIL 348

Query: 312 IDGFAKAGNL-------------------LGAS----------------QIWNRMISNGC 336
           IDG  KAG L                   +G S                QI+ RM++ G 
Sbjct: 349 IDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGI 408

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSL---IEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           SPNVV+ + ++K  CQN    +A  L   I K+ FE   P+ +T++  I G C  G +  
Sbjct: 409 SPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFE---PSILTYSALIAGFCKSGNLRD 465

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
              L + M +  C P+   Y+ L++GL +   V +A     +    G+  N+ T NT+L 
Sbjct: 466 GFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLD 525

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             CR   +V A ++   M +   K D +T+ I+I    + G+V+ A+ L  ++    ++ 
Sbjct: 526 SFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQML-KKDFK 584

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           PD+I+Y +L+ G+C              M    + P+ A +NVL+ ++ S  GHL
Sbjct: 585 PDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLI-NMHSREGHL 638



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/414 (21%), Positives = 180/414 (43%), Gaps = 33/414 (7%)

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           +  M+FG+     +A  +G C       +                + Y  +I S C  G 
Sbjct: 139 KFIMQFGNDYDTLDAFRDGFCDLDSTNHS----------------VVYGFLIESYCRKGM 182

Query: 216 VETSLGILGQMFVRG--CNPNIHSFTSLLKGYLLGGRTHEA-----SDLWNRMIREGFLP 268
            + S+ I   + V+G   +PN+     LL G L+     E       +L + M  + F  
Sbjct: 183 FDKSVDIFMHVCVKGIFVSPNV---VYLLLGSLIDSHCVEVIVDKYGELCSAMREQPF-- 237

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
               Y  +++   + G ++  +     + +     ++ T + ++ G     ++  A   +
Sbjct: 238 --SVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYF 295

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           N ++  G  PNVV ++ ++   C+     +A  L + MA     P+ + ++  I GL   
Sbjct: 296 NMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKA 355

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           GR++   +LL          ++  ++  +D  +++  +    ++   +   GI  N+V+ 
Sbjct: 356 GRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSC 415

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIR 507
           + ++ G C+ G ++EA  L  ++L  G +   +T++ +I  +CK G + +   L  D I+
Sbjct: 416 SILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIK 475

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              E  PD I Y+ L+ G+C  G + +A  +  + +N G+ PN  T N L+ S 
Sbjct: 476 KRCE--PDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSF 527



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 135/282 (47%), Gaps = 6/282 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +   +D    L  QM  +        + ++I+   ++  +   L +F  + +  
Sbjct: 558 LIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNA 617

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P + IYN +++    E        ++ ++   G +P+VFT+N ++   C   R+D A 
Sbjct: 618 VAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAV 677

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           +L  +M ++   P+A+++T ++ + C+ G++++A  +  +         +  Y+ LI+G 
Sbjct: 678 QLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGY 737

Query: 176 CKEHKI-EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            K   + E    L  EM++  I PN+++YS +I  LC  G ++ +         +   P+
Sbjct: 738 FKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPD 797

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++T L++GY   GR  EA  L++ M+     P+     TL
Sbjct: 798 VIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 272/540 (50%), Gaps = 14/540 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ ++I  +  + + E AL  +   ++ G++  +++ N +L  L+  N+      ++ +M
Sbjct: 143 VYATIIRIFVELSMFEDALLTYTEAKKVGVE--LQLCNFLLKCLVERNQIIYARSLFDDM 200

Query: 92  KRDGMEPNVFTYNILLKALCKNNRV--DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           K  G  PNV++Y++L+ A    +R+    A++LL EM  KG  P+A +Y T +  + +  
Sbjct: 201 KSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTR 260

Query: 150 QVEEA---RELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           QV  A    ++  + G+  + Y  NA+I G C+E +++EA  +   M   G+ P+  +YS
Sbjct: 261 QVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYS 320

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++  LC  G+V T   +L +M   G  P + S++SLL G    G+   A +L+ R+  +
Sbjct: 321 ILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQ 380

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  + + YS +++G C + +++    +   M  ++  P+   Y++LI  F +  NL  A
Sbjct: 381 GFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDA 440

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             ++  M+ +G SPNVV  T +V    +  M  +A   + K+      PN   +   I G
Sbjct: 441 LGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIING 500

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   + D    +   M +   +P+   Y+ ++D  ++  ++ EAF L  ++   G + N
Sbjct: 501 LCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPN 560

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           + TY ++++G+C    + E   L   M+ EG   D I +  +I  YCK+  +  A+++  
Sbjct: 561 VFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIF- 619

Query: 505 RIRGGGE--WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             RG G+   + D   YT L+ G      M  A   +++M N+G+ P+  T+  L+   F
Sbjct: 620 --RGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYF 677



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 227/472 (48%), Gaps = 11/472 (2%)

Query: 17  LLQQMKVEGV---SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           LL +M+++GV   + + G ++  ++  R+V  A   L+M   + + G       +N ++ 
Sbjct: 233 LLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQM---LCQRGNPCNTYCFNAVIQ 289

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +      ++  MK+ G+ P+  +Y+IL+  LCK   V   Y LLVEM   G AP
Sbjct: 290 GFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAP 349

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLL 188
             VSY++++  +C+ G+VE A EL  R     F     VY+ ++NG C+   IE    L 
Sbjct: 350 TLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLW 409

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +MV     P+   Y+++I + C   N+  +LG+   M   G +PN+ + T L+ G+   
Sbjct: 410 NDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKE 469

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               EA    +++ + G +PN+  Y  +I+GLC     D    +   M +    P+   Y
Sbjct: 470 RMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVY 529

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S +ID F KA  L  A +++++M+  G  PNV  YT ++  LC ++   +  +L + M +
Sbjct: 530 SIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIW 589

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E   P+ + + + I   C    +  A+++   M +     +   Y  L+ G  +V  +  
Sbjct: 590 EGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDG 649

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
           A  L+ E+   G+  ++VTY  ++ G  + G   +A      ML  G   DA
Sbjct: 650 AQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDA 701



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 237/558 (42%), Gaps = 45/558 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVS---CSEGVFISVINSYRRVGLAEQALKMFYRIR 57
           +++ L E+ +I   + L   MK  G S    S  V +S      R+ LAE A ++   + 
Sbjct: 180 LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAE-AFELLSEME 238

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             G+KP    Y   L  L    + +        + + G   N + +N +++  C+  +V 
Sbjct: 239 MKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQ 298

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALI 172
            A ++   M   G  PD  SY+ +V  +CK G V    +L +    +G++     Y++L+
Sbjct: 299 EAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLL 358

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +GLC+  K+E AF L   + ++G   + I YS I++  C   N+E    +   M      
Sbjct: 359 HGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFV 418

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+ +++TSL+  +       +A  ++  M+  G  PNVV  + L+ G      +DEA   
Sbjct: 419 PDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLF 478

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
            +++ +    PN+  Y  +I+G  K         I+  MI  G  P+ V Y+ ++    +
Sbjct: 479 LHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVK 538

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A  L  KM  E   PN  T+ + I GLC   R+   + L   M      P+   
Sbjct: 539 ALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRIL 598

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  L+    + + +K A E+                                F+ +GK+ 
Sbjct: 599 YTSLIVCYCKRSNMKAALEI--------------------------------FRGMGKL- 625

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   DA  +  +I  + K   ++ A  L++ +   G   P +++YT+L+ G    G  
Sbjct: 626 --GLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKG-LTPSVVTYTNLIIGYFKIGDE 682

Query: 533 QEAFIYLQKMLNEGICPN 550
           ++A +    ML  GI P+
Sbjct: 683 RKANMTYNSMLQAGITPD 700


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/446 (30%), Positives = 235/446 (52%), Gaps = 13/446 (2%)

Query: 134 DAVSYTTIVSSICKLGQVEEA--------RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           DAVSY T+++++C+ G ++ A         E  +        Y  L+  LC + +  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL  M D G+ P+V+TY T+I  LCD  +V+T++ +L +M   G  PN+  ++ LL GY
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR      ++  M   G  P+VV Y+ LI  LC +G + +A  V   M E    PNV
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LI+   K G++  A  +   M   G  P+VV Y  ++  L       +A +L+E+
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 366 M--AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           M        P+ +TFN+ I GLC  G +  A+++   M +  C  N+  +N L+ GLLRV
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           ++VK+A EL+ E+   G+Q +  TY+ +++G C+   V  A   L +M  +G + + + +
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
             ++ A C QG +  A  L + +    +   D  +Y++++ G   SG  + A  +L+ M+
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNEMDRNCKL--DAAAYSTMIHGAFKSGEKKIAEEFLKDMI 472

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLG 569
           +EG+ P+  T+++ + ++F+  G L 
Sbjct: 473 DEGLIPDAVTYSIPI-NMFAKSGDLA 497



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 235/473 (49%), Gaps = 16/473 (3%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNK---GCAPDAVSYTTIVSSICK-------L 148
           +  +YN +L ALC+   +D A  LL  M ++      P+A+SYTT++ ++C        +
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 149 GQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           G +   ++  +R    V  Y  LI GLC    ++ A  LL EM + GI+PNV+ YS ++ 
Sbjct: 115 GLLRSMQDCGVR--PDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G  E+   +  +M  RG  P++  +T+L+      G+  +A+ + + M   G  P
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           NVV Y+ LI+ +C  GS+ EA+ +   M E    P+V TY+ LI G +    +  A  + 
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 329 NRMIS--NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
             M+       P+++ +  ++  LC+     QA  +   MA   C  N V FN  I GL 
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLL 352

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V  AM+L+D+M      P+  TY+ L++G  ++ +V+ A   ++E+   G++   V
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPV 412

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y  +L  +C  GM+ +A  L  +M     KLDA  ++ +I+   K G+   A + L  +
Sbjct: 413 HYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDM 471

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              G   PD ++Y+  +     SG +  A   L++M   G  P+ A ++ L++
Sbjct: 472 IDEG-LIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQ 523



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 238/517 (46%), Gaps = 43/517 (8%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRV---GLAEQALKMFYRIREFGLKPTVKI 67
           +D   +LL+ M  E    S    IS     R +     A QA+ +   +++ G++P V  
Sbjct: 72  LDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVT 131

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++  L           + + M   G+EPNV  Y+ LL   CK  R +   K+  EM 
Sbjct: 132 YGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMS 191

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEE-ARELAMRFGSG----VSVYNALINGLCKEHKIE 182
            +G  PD V YT ++ S+C+ G+V++ AR + M    G    V  YN LIN +CKE  + 
Sbjct: 192 GRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVR 251

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  L   M ++G+ P+V+TY+T+I+ L  V  ++ ++ +L +M                
Sbjct: 252 EALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM---------------- 295

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
               + G T                P+++ ++++IHGLC  G M +A+ V   M EN C 
Sbjct: 296 ----MQGETR-------------VRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR 338

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            N+  ++ LI G  +   +  A ++ + M S+G  P+   Y+ ++   C+     +A S 
Sbjct: 339 CNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESY 398

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           + +M  +   P  V +   +K +C  G +  A  L ++M +  C  +   Y+ ++ G  +
Sbjct: 399 LSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHGAFK 457

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
               K A E + ++   G+  + VTY+  ++   ++G +  A ++L +M   G   D   
Sbjct: 458 SGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAV 517

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGG-EWNPDIIS 518
           F+ +I  Y  +G     ++L   +       +P IIS
Sbjct: 518 FDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIIS 554



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 215/459 (46%), Gaps = 11/459 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ M+  GV      + ++I         + A+++   + E G++P V +Y+ +L    
Sbjct: 116 LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYC 175

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  ++  M   G+EP+V  Y  L+ +LC++ +V  A +++  M  +G  P+ V
Sbjct: 176 KTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV 235

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++S+CK G V EA +L            V  YN LI GL    +++EA  LL EM
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295

Query: 192 V--DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +  +  + P+++T++++I  LC +G +  +L +   M   GC  N+ +F  L+ G L   
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH 355

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           +  +A +L + M   G  P+   YS LI+G C    ++ A S   +M      P    Y 
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYI 415

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+      G +  A  ++N M  N C  +  AY+ M+    ++     A   ++ M  E
Sbjct: 416 PLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDE 474

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT++  I      G +  A ++L QM     +P++  ++ L+ G       ++ 
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKI 534

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            EL  E+    + L+    +TI   V   G  +E  +LL
Sbjct: 535 LELTREMTAKDVALDPKIISTI---VTSLGASIEGQKLL 570



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 8/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D    LL +M   G+  +  V+  +++ Y + G  E   K+F  +   G
Sbjct: 135 LIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRG 194

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V +Y  ++D+L    +      +   M   G+EPNV TYN+L+ ++CK   V  A 
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREAL 254

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-------AMRFGSGVSVYNALIN 173
            L   M  KG  PD V+Y T+++ +  + +++EA  L         R    +  +N++I+
Sbjct: 255 DLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIH 314

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK   + +A  +   M + G   N++ ++ +I  L  V  V+ ++ ++ +M   G  P
Sbjct: 315 GLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQP 374

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +++ L+ G+    +   A    + M  +G  P  V Y  L+  +C  G M +A  + 
Sbjct: 375 DSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLF 434

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+ N C  +   YS +I G  K+G    A +    MI  G  P+ V Y+  + +  ++
Sbjct: 435 NEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKS 493

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
                A  ++++M      P+   F++ I+G    G  +  ++L  +M
Sbjct: 494 GDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREM 541



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 155/327 (47%), Gaps = 17/327 (5%)

Query: 253 EASDLWNRMIREGFLP-------------NVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           EA+   NR +R   LP             + V+Y+T++  LC  G +D A+ +   M   
Sbjct: 26  EAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHE 85

Query: 300 ---SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
              +  PN  +Y+ L+           A  +   M   G  P+VV Y  +++ LC     
Sbjct: 86  PRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADV 145

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  L+ +M      PN V ++  + G C  GR +   K+ ++M      P++  Y  L
Sbjct: 146 DTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTAL 205

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +D L R  +VK+A  ++  + + G++ N+VTYN +++ +C+ G V EA  L   M  +G 
Sbjct: 206 IDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGV 265

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRI-RGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           + D +T+N +I       +++ A+ LL+ + +G     PD++++ S++ G+C  G M++A
Sbjct: 266 QPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQA 325

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLF 562
                 M   G   N   +N+L+  L 
Sbjct: 326 LQVRAMMAENGCRCNLVAFNLLIGGLL 352



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 125/243 (51%), Gaps = 4/243 (1%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE---NCPPNTVTFNTFIKGLCGCGRVDWAM 395
           + V+Y  ++  LC+      A  L+  M+ E      PN +++ T ++ LC   R   A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LL  M+     P++ TY  L+ GL     V  A EL+ E+ + GI+ N+V Y+ +LHG 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+ G      ++  +M   G + D + +  +I + C+ GKV  A +++D +   G   P+
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG-LEPN 233

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
           +++Y  L+  +C  G ++EA    + M  +G+ P+  T+N L+  L S L     + +L+
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE 293

Query: 576 DIM 578
           ++M
Sbjct: 294 EMM 296


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 241/490 (49%), Gaps = 6/490 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            +Q     +   +   + ++N   R G   ++L     +   G KP V +   ++     
Sbjct: 50  FRQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFN 109

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                    +   ++  G +P+V++YN ++    K N++D A ++   M ++G +PD V+
Sbjct: 110 SRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVT 168

Query: 138 YTTIVSSICKLGQVEEARELA---MRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMV 192
           Y  ++ S+C  G++E A E+    ++ G   SV  Y  LI     E +I EA  L  E+V
Sbjct: 169 YNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELV 228

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            RG+ P++ TY+ II  +C  G  + +L  +  +  RGCNP++ S+  LL+ +L   R  
Sbjct: 229 SRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWE 288

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +   L   M+  G  PNVV +S LI   C  G + EAV+V   M+E    P+  +Y  LI
Sbjct: 289 DGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLI 348

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             F K G L  A +   +M+S+GC P++V Y  ++  LC+      A  + EK+    CP
Sbjct: 349 SAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCP 408

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P    +NT    L  CG    A++++ +M +    P+  TYN L+  L R   V EA  L
Sbjct: 409 PTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGL 468

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + ++E    Q  ++++N +L G+C+A  V E  +LL  M+ +G   +  ++ ++I     
Sbjct: 469 LVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAY 528

Query: 493 QGKVNNAIQL 502
            G    A++L
Sbjct: 529 AGWRAEAMEL 538



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 239/460 (51%), Gaps = 5/460 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG 162
           LL   C+  + + +   L  + +KG  PD V  T ++        +++A    E+   +G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 163 S-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YNA+I+G  K ++I+ A  +   M  RG  P+V+TY+ +I SLC  G +E +  
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++ ++   GC P++ ++T L++  +L GR +EA +L++ ++  G  P++  Y+ +I G+C
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G  D A+     +    C P+V +Y+ L+  F          ++   M+ +GC PNVV
Sbjct: 248 KEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVV 307

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            ++ ++   C+     +A +++E M  +   P++ +++  I   C  GR+D A++ L++M
Sbjct: 308 THSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM 367

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               CLP+I  YN +L  L +      A ++  ++++ G    +  YNT+   +   G  
Sbjct: 368 VSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK 427

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
           ++A +++ +M+ +G   D IT+N +I   C+ G V+ AI LL  +     + P +IS+  
Sbjct: 428 IKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDME-ATRFQPTVISFNI 486

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L G+C +  + E    L  M+ +G  PN  ++ +L+  +
Sbjct: 487 VLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGI 526



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 214/412 (51%), Gaps = 5/412 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+ + +    + A ++F R+R  G  P V  YN ++ +L +  +  +   +   + +D
Sbjct: 136 AMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKD 195

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G +P+V TY IL++A     R++ A +L  E+ ++G  PD  +Y  I+  ICK G  + A
Sbjct: 196 GCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRA 255

Query: 155 ----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
               R L+ R     V  YN L+     + + E+   L+ +MV  G +PNV+T+S +ISS
Sbjct: 256 LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISS 315

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  G V  ++ +L  M  +G  P+ +S+  L+  +   GR   A +   +M+ +G LP+
Sbjct: 316 FCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +V Y+T++  LC  G  D A+ V  +++E  CPP V  Y+ +       GN + A ++ +
Sbjct: 376 IVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMIS 435

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            MI  G  P+ + Y  ++  LC++ +  +A  L+  M      P  ++FN  + G+C   
Sbjct: 436 EMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAH 495

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           RV   ++LL  M +  CLPN T+Y  L++G+       EA EL   + + G+
Sbjct: 496 RVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 176/353 (49%), Gaps = 2/353 (0%)

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G    SL  L  +  +G  P++   T L+KG+       +A  +   +   G  P+V
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD-PDV 131

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
            +Y+ +I G      +D A  V  +M      P+V TY+ +I      G L  A ++ + 
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           ++ +GC P+V+ YT +++        ++A  L +++      P+  T+N  I+G+C  G 
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            D A+  +  +    C P++ +YN LL   L  +R ++   L+ ++   G + N+VT++ 
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++   CR G V EA  +L  M  +G   D+ +++ +I A+CK+G+++ AI+ L+++   G
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
              PDI++Y ++L  +C  G    A    +K+   G  P    +N +  +L+S
Sbjct: 372 CL-PDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 6/261 (2%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           DG + L++ M + G   +      +I+S+ R G   +A+ +   ++E GL P    Y+ +
Sbjct: 289 DG-ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPL 347

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           + A   E R  +       M  DG  P++  YN +L  LCK    D A  +  ++   GC
Sbjct: 348 ISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGC 407

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFW 186
            P   +Y T+ S++   G   +A E+ +     G+      YN+LI+ LC++  ++EA  
Sbjct: 408 PPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIG 467

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           LL +M      P VI+++ ++  +C    V   + +L  M  +GC PN  S+  L++G  
Sbjct: 468 LLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIA 527

Query: 247 LGGRTHEASDLWNRMIREGFL 267
             G   EA +L N + R G +
Sbjct: 528 YAGWRAEAMELANSLYRLGVI 548


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 158/540 (29%), Positives = 262/540 (48%), Gaps = 24/540 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I  Y R G   Q            + P    Y  I+ +L A    +    +   M   
Sbjct: 81  AMIAGYCRAG---QVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLR 137

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G        +++L+A C+      A + L  +  KGC  D+ +   +VS+IC+ G V+E 
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMV----------DRGIDPN 199
            EL  +  S      +  YNA++ GLC   + ++   L+ EMV          + G  P+
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPD 257

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +  Y+TII  +C  G+ E +  IL +M   G  PN+  + ++LKG     R  EA DL  
Sbjct: 258 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 317

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M +E    + V ++ L+   C NG +D  + +  QM E+ C P+V TY+ +I+GF K G
Sbjct: 318 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 377

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A  +   M + GC PN ++YT ++K LC+   +  A  LI  M  + C PN VTFN
Sbjct: 378 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 437

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I  +C  G  + A++LL QM    C P++ +Y+ ++DGL +  + +EA EL+  +   
Sbjct: 438 TLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINK 497

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  N + Y+++   + R G   +  Q+   +     + DA  +N +I + CK+ + + A
Sbjct: 498 GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRA 557

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           I     +   G   P+  +YT L+ G+ + G ++EA    Q +L+E +C   A    LVR
Sbjct: 558 IDFFAYMVSNG-CMPNESTYTILIRGLASEGLVREA----QDLLSE-LCSRRAVRKHLVR 611



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 252/483 (52%), Gaps = 16/483 (3%)

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           + PN +TY  ++++LC    +  A  +L EM  +GCA        I+ + C+ G    A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 155 RELAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           R L +    G ++     N +++ +C++  ++E   LL ++   G +P++++Y+ ++  L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 211 C------DVGNVETSL----GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           C      DV  +   +      L QM   GC P++  + +++ G    G    A+D+ +R
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M   G  PNVV Y+T++ GLCS    +EA  +  +M +  CP +  T++ L+D F + G 
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +    ++  +M+ +GC P+V+ YT ++   C+  +  +A  L++ M+   C PNT+++  
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            +KGLC   R   A +L+  M Q  CLPN  T+N L++ + +    ++A EL+ ++   G
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              ++++Y+T++ G+ +AG   EA +LL  M+ +G   + I ++ +  A  ++G+ +  I
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 523

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           Q+ D I+       D   Y +++  +C       A  +   M++ G  PN +T+ +L+R 
Sbjct: 524 QMFDSIQDA-TVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRG 582

Query: 561 LFS 563
           L S
Sbjct: 583 LAS 585



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 241/468 (51%), Gaps = 16/468 (3%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           L+++LC   R   A + L   G+   A   V+Y  +++  C+ GQV  AR LA       
Sbjct: 50  LIRSLCAAGRTADAARALDTAGD---AAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVPP 106

Query: 166 SVYN--ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           + Y    ++  LC    I +A  +L EM  RG          I+ + C  G   +++  L
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             +  +GC  +  +   ++      G   E  +L  ++   G  P++V+Y+ ++ GLC  
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226

Query: 284 GSMD-------EAVSVS---YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
              D       E V V     QM E+ C P++  Y+ +IDG  K G+   A+ I +RM S
Sbjct: 227 KRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS 286

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  PNVV Y  ++K LC    + +A  L+ +M  E+CP + VTFN  +   C  G VD 
Sbjct: 287 YGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDR 346

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
            ++LL+QM ++ C+P++ TY  +++G  +   V EA  L+  +  CG + N ++Y  +L 
Sbjct: 347 VIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLK 406

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+CRA   V+A +L+  M+ +G   + +TFN +I   CK+G    AI+LL ++   G  +
Sbjct: 407 GLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG-CS 465

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PD+ISY++++ G+  +G  +EA   L  M+N+GI PN   ++ +  +L
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 513



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 216/434 (49%), Gaps = 15/434 (3%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           LQ +  +G +   G    V+++    G  ++ +++  ++  FG +P +  YN +L  L  
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 78  ENRFS----------MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
             R+            ++   S M   G  P++  Y  ++  +CK+   + A  +L  M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVSV----YNALINGLCKEHKIE 182
           + G  P+ V Y T++  +C   + EEA + LA  F     +    +N L++  C+   ++
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
               LL +M++ G  P+VITY+T+I+  C  G V+ ++ +L  M   GC PN  S+T +L
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           KG     R  +A +L + MI++G LPN V ++TLI+ +C  G  ++A+ +  QM  N C 
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P++ +YS +IDG  KAG    A ++ N MI+ G +PN + Y+ M   L +     +   +
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            + +       +   +N  I  LC     D A+     M    C+PN +TY  L+ GL  
Sbjct: 526 FDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLAS 585

Query: 423 VNRVKEAFELVTEI 436
              V+EA +L++E+
Sbjct: 586 EGLVREAQDLLSEL 599



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 187/362 (51%), Gaps = 5/362 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+  V   L QM   G +    ++ ++I+   + G  E A  +  R+  +GLKP V  YN
Sbjct: 238 EMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYN 297

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L +  R+     + + M ++    +  T+NIL+   C+N  VD   +LL +M   
Sbjct: 298 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 357

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC PD ++YTT+++  CK G V+EA  L     +         Y  ++ GLC+  +  +A
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 417

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+  M+ +G  PN +T++T+I+ +C  G  E ++ +L QM V GC+P++ S+++++ G
Sbjct: 418 QELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDG 477

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+T EA +L N MI +G  PN + YS++   L   G  D+ + +   +++ +   +
Sbjct: 478 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 537

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y+A+I    K      A   +  M+SNGC PN   YT +++ L    +  +A  L+ 
Sbjct: 538 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 597

Query: 365 KM 366
           ++
Sbjct: 598 EL 599



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 15/264 (5%)

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           SALI     AG    A++  +   + G +  VVAY  M+   C+     Q  +     A 
Sbjct: 48  SALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAG---QVAAARRLAAA 101

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
              PPN  T+   ++ LC  G +  A+ +LD+M    C       + +L+   R    + 
Sbjct: 102 VPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A   +  +   G  L+    N ++  +C  G V E  +LL K+   G + D +++N ++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEW---------NPDIISYTSLLWGICNSGGMQEAFIYL 539
             C   + ++  +L+  +    E           PD+  Y +++ GIC  G  + A   L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 540 QKMLNEGICPNFATWNVLVRSLFS 563
            +M + G+ PN   +N +++ L S
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCS 305



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+QM V G S     + +VI+   + G  E+AL++   +   G+ P   IY+ +  AL 
Sbjct: 455 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALS 514

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R   I  ++ +++   +  +   YN ++ +LCK    D A      M + GC P+  
Sbjct: 515 REGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNES 574

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALIN 173
           +YT ++  +   G V EA++L     S  +V   L+ 
Sbjct: 575 TYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVR 611



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 64/129 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG+  + +    LL  M  +G++ +  ++ S+ ++  R G  ++ ++MF  I++  
Sbjct: 474 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 533

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++    +YN ++ +L            ++ M  +G  PN  TY IL++ L     V  A 
Sbjct: 534 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 593

Query: 121 KLLVEMGNK 129
            LL E+ ++
Sbjct: 594 DLLSELCSR 602


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 257/521 (49%), Gaps = 11/521 (2%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            A  +F + R FGL+  +   N +L+     N+   I  ++  +K  G  PNVFTY I++
Sbjct: 196 DAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMM 255

Query: 108 KALCK-----NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELA 158
              CK     N  +  A ++L EM   G +P  V+Y   +  +C+ G VE A    R+L 
Sbjct: 256 NYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLR 315

Query: 159 MRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           +R     S  YNA+I+  C+  ++ EAF LL +M   GI P   +YS +I  LC  G VE
Sbjct: 316 IRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVE 375

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L ++ +M      P++ +++SL  G    G T  +  +++ +  EG+  +V++Y+TLI
Sbjct: 376 KALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLI 435

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +G      M  A  + ++M  N   PN  T++ LI GF K   L  A +++  M+  G  
Sbjct: 436 NGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQ 495

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            N+     M     +   F +A  LI ++      PN+ T+N  IK LC   + + A ++
Sbjct: 496 LNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEV 555

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L  M +    P    YN L+DG  + +   +A  L  ++ K GI  +IVTY  +++    
Sbjct: 556 LPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSN 615

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
              + EA+ L  +M+ +G   D I F  II  +CK G + +A  L + +   G+ +P+++
Sbjct: 616 RSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGK-SPNVV 674

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +YT L+ G      M +A     KM  + + P+  T+  L+
Sbjct: 675 TYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 231/494 (46%), Gaps = 12/494 (2%)

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           M  ++   N+L+K   +NN +  A  + V+    G   + +S   +++   +  Q E  R
Sbjct: 174 MGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIR 233

Query: 156 ELAMRF-----GSGVSVYNALINGLCKEH-----KIEEAFWLLCEMVDRGIDPNVITYST 205
            L            V  Y  ++N  CK        I +A  +L EM   G  P V+TY  
Sbjct: 234 SLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGA 293

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            I  LC  G VE +L ++  + +R    N + + +++  +   G  HEA +L   M   G
Sbjct: 294 YIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHG 353

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P   +YS LI GLC  G +++A+ +  +M +++  P++ TYS+L DG  K+G    + 
Sbjct: 354 ISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISL 413

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +++ + + G   +V++Y  ++           A  L+ +M      PN+ TFN  I G 
Sbjct: 414 SMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGF 473

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   R+D A+++   M +     NI T N + D   R     EA +L+ E++  GI  N 
Sbjct: 474 CKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNS 533

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TYN ++  +C+     +A+++L  ML       AI +N +I  Y KQ     A+ L  +
Sbjct: 534 YTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAK 593

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           +   G   P I++YT L+    N   MQEA+   ++M+ +G+ P+   +  ++   F  +
Sbjct: 594 MLKVG-IPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAG-FCKV 651

Query: 566 GHLGPVYILDDIMA 579
           G +   + L + M+
Sbjct: 652 GDMKSAWALYEEMS 665



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 216/472 (45%), Gaps = 5/472 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
            G+  +I     +L++M++ G S +   + + I+   R G  E AL++   +R       
Sbjct: 263 FGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLN 322

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              YN ++              +  +M+  G+ P  ++Y+IL+  LCK  +V+ A  L+ 
Sbjct: 323 SYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIE 382

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
           EM      P  V+Y+++   +CK G  E +  +    G+      V  YN LING   + 
Sbjct: 383 EMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQR 442

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            +  A  L+ EM   G  PN  T++ +I   C    ++ +L +   M   G   NI +  
Sbjct: 443 DMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCN 502

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            +   +   G   EA  L N +   G +PN   Y+ +I  LC     ++A  V   M +N
Sbjct: 503 IMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKN 562

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +  P    Y+ LIDG+AK  N   A  ++ +M+  G  P++V YT ++ +    +   +A
Sbjct: 563 NVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEA 622

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           + L ++M  +   P+ + F   I G C  G +  A  L ++M Q+   PN+ TY  L+DG
Sbjct: 623 YYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDG 682

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
             ++ R+ +A  L  ++++  +  + +TY  ++ G    G      ++  +M
Sbjct: 683 YFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEM 734



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/448 (23%), Positives = 214/448 (47%), Gaps = 7/448 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++ +++     +   + +VI+ + R G   +A ++   +R  G+ PT   Y+ ++D L 
Sbjct: 310 LIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLC 369

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      +   M +  ++P++ TY+ L   LCK+   + +  +   +G +G   D +
Sbjct: 370 KKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVI 429

Query: 137 SYTTIVSSICKLGQVEEARELA--MRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEM 191
           SY T+++       +  A +L   MR    V     +N LI+G CK  ++++A  +   M
Sbjct: 430 SYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIM 489

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +  G+  N+ T + +       G+   +L ++ ++   G  PN +++  ++K      +T
Sbjct: 490 LKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKT 549

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A ++   M++    P  + Y+TLI G     +  +A+ +  +M +   PP++ TY+ L
Sbjct: 550 EKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTML 609

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ F+    +  A  ++  MI  G  P+ + +TC++   C+      A +L E+M+    
Sbjct: 610 INMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGK 669

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+   I G     R+D A  L ++MK+    P+  TY  L+ G   +       E
Sbjct: 670 SPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVRE 729

Query: 432 LVTEIEKCGIQLNIVTYNTI-LH-GVCR 457
           +  E+++ G+  N   Y T+ LH GV R
Sbjct: 730 MFNEMKENGVFPNYTAYATLGLHLGVVR 757


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 272/555 (49%), Gaps = 8/555 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  MK  G+  +   +  ++    + G   +AL+++  +   G+ P+V+ Y+ ++ A   
Sbjct: 227 LPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGK 286

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G++PNV++Y I ++ L +  R D AY++L EM N+GC PD ++
Sbjct: 287 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVIT 346

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
           +T ++  +C  G++ +A+++  +            Y  L++      + +    +   M 
Sbjct: 347 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMK 406

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + NV+ Y+ +I +LC VG V  +L +  +M  +G  P  +S+ SL+ G+L   R  
Sbjct: 407 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 466

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 467 DALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVL 526

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G AK+G L  A ++++ + + G SP+ + YT M+K   + + F +A  +   M   NC 
Sbjct: 527 FGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV 586

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   GR D A ++  Q+K+    P   TYN LL GL R  +VKE   L
Sbjct: 587 PDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 646

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+       N++TYNTIL  +C+ G V +A  +L  M  +G   D  ++N +IY   K
Sbjct: 647 LEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVK 706

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF-IYLQKMLNEGICPNF 551
           + + N A  +  +++      PD  +  ++L      G M+EA  I  +  L  G   + 
Sbjct: 707 EERYNEAFSIFCQMK--KVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDR 764

Query: 552 ATWNVLVRSLFSNLG 566
           ++ + L+  +    G
Sbjct: 765 SSCHSLMEGILKKAG 779



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 278/586 (47%), Gaps = 43/586 (7%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L + M + G   +    +  IN Y + G + +A++ +  ++  G+ P V   N +L  L 
Sbjct: 471  LFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLA 530

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               R  M   ++  +K  G+ P+  TY +++K   K ++ D A K+  +M    C PD +
Sbjct: 531  KSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVL 590

Query: 137  SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
               +++ ++ K G+ +EA ++      M        YN L+ GL +E K++E   LL EM
Sbjct: 591  VVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 650

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                  PN+ITY+TI+  LC  G V  +L +L  M  +GC P++ S+ +++ G +   R 
Sbjct: 651  YHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERY 710

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTTYS 309
            +EA  ++ +M ++  +P+     T++      G M EA+ +   Y ++  S     + +S
Sbjct: 711  NEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHS 769

Query: 310  ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
             L++G  K      + +    + S+G + +      ++K LC+     +AH L++K    
Sbjct: 770  -LMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSF 828

Query: 370  NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
                 T ++N+ I GL     +D A  L  +MK+  C P+  TYN LLD + +  R++E 
Sbjct: 829  GVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEM 888

Query: 430  FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             ++  E+ + G +   VTYNTI+ G+ ++  + +A  L   ++ +G      T+  ++  
Sbjct: 889  LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 948

Query: 490  YCKQGKVNNAIQLLD---------------------RIRGGGEW-------------NPD 515
              K G++ +A  L +                     RI G  E              NPD
Sbjct: 949  LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1008

Query: 516  IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            I SYT ++  +C +G + +   Y +++L  G+ P+  T+N+L+  L
Sbjct: 1009 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1054



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/554 (26%), Positives = 258/554 (46%), Gaps = 8/554 (1%)

Query: 14   VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
             + +  ++K  GVS     +  +I    +    ++A+K+FY + E    P V + N ++D
Sbjct: 538  AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLID 597

Query: 74   ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
             L    R      I+  +K   +EP   TYN LL  L +  +V     LL EM +    P
Sbjct: 598  TLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 657

Query: 134  DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
            + ++Y TI+  +CK G V +A ++     +      +S YN +I GL KE +  EAF + 
Sbjct: 658  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 717

Query: 189  CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLL 247
            C+M  + + P+  T  TI+ S   +G ++ +L I+ + F++ G   +  S  SL++G L 
Sbjct: 718  CQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 248  GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
               T ++ +    +   G   +      LI  LC      EA  +  + +         +
Sbjct: 777  KAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS 836

Query: 308  YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            Y++LI G      +  A  ++  M   GC P+   Y  ++  + ++    +   + E+M 
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896

Query: 368  FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
             +      VT+NT I GL    R++ A+ L   +      P   TY  LLDGLL+  R++
Sbjct: 897  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956

Query: 428  EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            +A  L  E+ + G + N   YN +L+G   AG   +   L   M+ +G   D  ++ III
Sbjct: 957  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1016

Query: 488  YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
               CK G++N+ +    ++   G   PD+I+Y  L+ G+  S  ++EA     +M  +GI
Sbjct: 1017 DTLCKAGQLNDGLTYFRQLLEMG-LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1075

Query: 548  CPNFATWNVLVRSL 561
             PN  T+N L+  L
Sbjct: 1076 VPNLYTYNSLILHL 1089



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/551 (25%), Positives = 244/551 (44%), Gaps = 75/551 (13%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I++  + G  ++A ++FY+++E  L+PT   YN +L  L  E +   +  +   M   
Sbjct: 594  SLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 653

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT--------------- 139
               PN+ TYN +L  LCKN  V+ A  +L  M  KGC PD  SY                
Sbjct: 654  NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 713

Query: 140  -------------------TIVSSICKLGQVEEA-------------------------- 154
                               TI+ S  K+G ++EA                          
Sbjct: 714  FSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEG 773

Query: 155  ------RELAMRFG-----SGVSVYN----ALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                   E ++ F      SG+++ +     LI  LCK+ K  EA  L+ +    G+   
Sbjct: 774  ILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 833

Query: 200  VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
              +Y+++I  L D   ++ + G+  +M   GC P+  ++  LL       R  E   +  
Sbjct: 834  TGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 893

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             M R+G+    V Y+T+I GL  +  +++A+ + Y +      P   TY  L+DG  KAG
Sbjct: 894  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 953

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             +  A  ++N M+  GC  N   Y  ++          +   L + M  +   P+  ++ 
Sbjct: 954  RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 1013

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I  LC  G+++  +    Q+ +    P++ TYN L+DGL +  R++EA  L  E++K 
Sbjct: 1014 IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 1073

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
            GI  N+ TYN+++  + +AG   EA ++  ++L +G K +  T+N +I  Y   G  ++A
Sbjct: 1074 GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1133

Query: 500  IQLLDRIRGGG 510
                 R+  GG
Sbjct: 1134 YAAYGRMIVGG 1144



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 151/607 (24%), Positives = 266/607 (43%), Gaps = 86/607 (14%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKP----TVKIYNHILDALLAENRFSMINPIYSN 90
            VI++ R      +AL+   R R    +P    T    N++LD +    R   +  ++  
Sbjct: 138 DVIHALRSADGPAEALE---RFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDV 194

Query: 91  MKRDGMEPNV-----------------------------------FTYNILLKALCKNNR 115
           M+R  ++ NV                                   +TYN L+  L K+  
Sbjct: 195 MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 254

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVYNA 170
              A ++   M   G  P   +Y+ ++ +  K   VE      RE+ A      V  Y  
Sbjct: 255 DREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 314

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
            I  L +  + +EA+ +L EM + G  P+VIT++ +I  LCD G +  +  +  +M    
Sbjct: 315 CIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 374

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             P+  ++ +LL  +   G +    ++WN M  +G+  NVVAY+ +I  LC  G + EA+
Sbjct: 375 QKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 434

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKA-------------------------------- 318
            +  +M++    P   +Y++LI GF KA                                
Sbjct: 435 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYY 494

Query: 319 ---GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
              G  + A Q +  M S G  P+VVA   ++  L ++     A  +  ++      P+T
Sbjct: 495 GKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 554

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           +T+   IK      + D A+K+   M +  C+P++   N L+D L +  R  EA+++  +
Sbjct: 555 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQ 614

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +++  ++    TYNT+L G+ R G V E   LL +M       + IT+N I+   CK G 
Sbjct: 615 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 674

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF-IYLQKMLNEGICPNFATW 554
           VN+A+ +L  +   G   PD+ SY ++++G+       EAF I+ Q  + + + P++AT 
Sbjct: 675 VNDALDMLYSMTTKG-CIPDLSSYNTVIYGLVKEERYNEAFSIFCQ--MKKVLIPDYATL 731

Query: 555 NVLVRSL 561
             ++ S 
Sbjct: 732 CTILPSF 738



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/526 (23%), Positives = 248/526 (47%), Gaps = 42/526 (7%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG + ++  V +LL++M       +   + ++++   + G    AL M Y +   G
Sbjct: 630  LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 689

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK-------- 112
              P +  YN ++  L+ E R++    I+  MK+  + P+  T   +L +  K        
Sbjct: 690  CIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKK-VLIPDYATLCTILPSFVKIGLMKEAL 748

Query: 113  ----------NNRVDGA--YKLLVEMGNKGCAPDAVSYTTIVSS---------------- 144
                       ++ D +  + L+  +  K     ++ +  I++S                
Sbjct: 749  HIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKH 808

Query: 145  ICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            +CK  +  EA EL  +F S GVS+    YN+LI GL  E+ I+ A  L  EM + G  P+
Sbjct: 809  LCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPD 868

Query: 200  VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
              TY+ ++ ++     +E  L +  +M  +G      ++ +++ G +   R  +A DL+ 
Sbjct: 869  EFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYY 928

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             ++ +GF P    Y  L+ GL   G +++A ++  +M E  C  N T Y+ L++G   AG
Sbjct: 929  NLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAG 988

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            N      ++  M+  G +P++ +YT ++  LC+    +   +   ++      P+ +T+N
Sbjct: 989  NTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYN 1048

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I GL    R++ A+ L ++M++   +PN+ TYN L+  L +  +  EA ++  E+   
Sbjct: 1049 LLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTK 1108

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            G + N+ TYN ++ G   +G    A+   G+M++ G   ++ T +I
Sbjct: 1109 GWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/573 (21%), Positives = 256/573 (44%), Gaps = 14/573 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I   + +  +MK          +I++++ +   G ++  ++++  ++  G
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  ++DAL    R      ++  MK+ G+ P  ++YN L+    K +R   A 
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
           +L   M   G  P+  ++   ++   K G+  +A    EL    G    V   NA++ GL
Sbjct: 470 ELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++  A  +  E+   G+ P+ ITY+ +I         + ++ I   M    C P++
Sbjct: 530 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 589

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
               SL+      GR  EA  ++ ++      P    Y+TL+ GL   G + E + +  +
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 649

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  ++ PPN+ TY+ ++D   K G +  A  +   M + GC P++ +Y  ++  L +   
Sbjct: 650 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 709

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP----NIT 411
           +++A S+  +M  +   P+  T  T +      G +  A+ ++   K+Y   P    + +
Sbjct: 710 YNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHII---KEYFLQPGSKTDRS 765

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           + + L++G+L+    +++ E    I   GI L+      ++  +C+    +EA +L+ K 
Sbjct: 766 SCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKF 825

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
              G  L   ++N +I     +  ++ A  L   ++  G   PD  +Y  LL  +  S  
Sbjct: 826 KSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELG-CGPDEFTYNLLLDAMGKSMR 884

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++E     ++M  +G    + T+N ++  L  +
Sbjct: 885 IEEMLKVQEEMHRKGYESTYVTYNTIISGLVKS 917


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 271/539 (50%), Gaps = 10/539 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ +VI  +  + + E AL  +   ++ G++  +++ N +L  L+  N+   +  ++ +M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVE--LQVCNFLLKGLVEGNQIMYVRSLFDDM 202

Query: 92  KRDGMEPNVFTYNILLKALCKNNRV--DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           K  G  PN+++Y++L+       ++  + A +LL EM  +G  P+A +Y T +  +C+  
Sbjct: 203 KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAK 262

Query: 150 QVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           QV+ A    + L  R +      +NA+I+G C + ++ +A  +   M   G  P+V +YS
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYS 322

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++  LC  G+V T   +L +M   G  PN+ S++SLL G    GR   A +L+ R+  +
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  + + YS ++HG C +  ++    +   M  ++  P+   YS+LI  + +   L  A
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++  MI +G  PNVV  T +V       +  +A   ++K+      PN  T+   I G
Sbjct: 443 LEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIING 502

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   + +    +   M +   +P+   Y+ ++DG ++   ++EAF L  ++   G + N
Sbjct: 503 LCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPN 562

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           I TY ++++G+C    + E   L   M+ EG   D I +  +I  YCK+  +  A+++  
Sbjct: 563 IFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFR 622

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            +   G  + D   YT L+ G      M  A +++++M+N+G+ P   T+  L+   F 
Sbjct: 623 EMETEG-LSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFK 680



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 226/525 (43%), Gaps = 33/525 (6%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           G K  ++  Q LL +M+VEGV  +   + + +    R    + A      + + G     
Sbjct: 224 GAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNS 283

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             +N ++     + +      ++  MK+ G  P+V +Y+IL+  LCK   V   Y +LVE
Sbjct: 284 YCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVE 343

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           M   G  P+ VSY++                              L++GLC+  ++E AF
Sbjct: 344 MARNGITPNLVSYSS------------------------------LLHGLCRAGRVELAF 373

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L   + D+G   + I YS ++   C   ++E    +   M      P+ ++++SL+  Y
Sbjct: 374 ELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAY 433

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               +  EA +++  MI +G  PNVV  + L+HG  + G + EA     ++ +    PN+
Sbjct: 434 CRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNL 493

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY  +I+G  K         I+  MI  G  P+ V Y+ ++    +     +A  L  K
Sbjct: 494 CTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYK 553

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  E   PN  T+ + I GLC   ++   M L   M      P+   Y  L+    + + 
Sbjct: 554 MVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSN 613

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +K A E+  E+E  G+  +   Y  ++ G  +   +  A   + +M+ +G     +T+  
Sbjct: 614 MKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTD 673

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           +I  Y K G    A+ + + +   G   PD  +  S + G+ N G
Sbjct: 674 LIIGYFKIGDEKKAMVMYNSMLQAG-IAPD--AKLSCILGLGNDG 715



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 108/222 (48%), Gaps = 3/222 (1%)

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV--DWAMKLLDQMKQ 403
           ++K L + N      SL + M      PN  +++  +       ++  + A +LL +M+ 
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEV 241

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               PN  TY   L GL R  +VK A+  +  + + G   N   +N ++HG C  G V +
Sbjct: 242 EGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHK 301

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A ++   M   G   D  +++I++   CKQG V     +L  +   G   P+++SY+SLL
Sbjct: 302 AVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG-ITPNLVSYSSLL 360

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
            G+C +G ++ AF   +++ ++G   +   +++++     +L
Sbjct: 361 HGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHL 402



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 3/169 (1%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV--EAFQLLGKM 471
           N LL GL+  N++     L  +++  G   NI +Y+ ++        +   EA +LL +M
Sbjct: 180 NFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEM 239

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
            +EG + +A T+   +Y  C+  +V +A   L  +   G +  +   + +++ G C+ G 
Sbjct: 240 EVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRG-YPCNSYCFNAVIHGFCHDGQ 298

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           + +A      M   G  P+  ++++LV  L      L   Y+L ++  N
Sbjct: 299 VHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARN 347


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 254/527 (48%), Gaps = 3/527 (0%)

Query: 30  EGVFISVINSYRRVGLAEQALKMFYRIREFGLK-PTVKIYNHILDALLAENRFSMINPIY 88
           +  F S++  + R  L    L++F  +   G   PT   YN ++ AL             
Sbjct: 93  DRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYL 152

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S M R G  P+ FT+N L+   C+  ++D A  L  +M  +G + DAVSY  ++   C+ 
Sbjct: 153 SLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCET 212

Query: 149 GQVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           G+V+EA EL        +  + AL+ GLC   + EE  ++L +M + G  P    Y+ ++
Sbjct: 213 GRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALV 272

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C     E +  +L +MF  G  P   + T+++  Y   GR   A  ++  M  +G  
Sbjct: 273 DLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCE 332

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PNV  Y+ ++ G C+ G + +A+++  QM E    P+V TY+ LI G    G++  A ++
Sbjct: 333 PNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRL 392

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              M  NG + +   Y  ++  LC+     +A SL + + +    PN+VTFNT I GLC 
Sbjct: 393 LRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK 452

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G+ D A   L++M    C P+  TY+  ++ L +    +E    + E+ +  ++ + V 
Sbjct: 453 GGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVN 512

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  ++  + +      A ++ G+M+  G   D +T+   + AYC +G+++ A  ++  ++
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            GG    D ++Y +L+ G  + G    A   L+ M      PN  T+
Sbjct: 573 KGGIIV-DAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/588 (25%), Positives = 256/588 (43%), Gaps = 27/588 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   E   +D    L ++++   +     +   + ++ R     E+ L M  +++E G
Sbjct: 205 LIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARR----GEEGLYMLQKMKELG 260

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P  + Y  ++D    E +      + + M  +G+ P   T   ++ A C+  R+ GA 
Sbjct: 261 WRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAV 320

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
           ++   M  KGC P+  +Y  +V   C +G+V +A  L   MR       V  YN LI G 
Sbjct: 321 RVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQ 380

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C +  IE AF LL  M   G+  +  TY+ +I +LC  G V+ +  +   +  RG  PN 
Sbjct: 381 CIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNS 440

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +++ G   GG+   A     +M+  G  P+   YS  I  LC      E +S   +
Sbjct: 441 VTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDE 500

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+ +ID   K  N   A++IW +M+S GCSP+VV YT  V+  C    
Sbjct: 501 MLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGR 560

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY-- 413
            H+A +++ +M       + + +NT I G    G+ D A+ +L  M     +PN  T+  
Sbjct: 561 LHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFI 620

Query: 414 --------NELLDGLLRVNRV------KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
                       D  L+   V       + FEL   ++K  +  +   Y  IL G     
Sbjct: 621 LLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEER 680

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + E   L+  M  +   L+   +  ++  +CK     +A  LL  + G G + P++ISY
Sbjct: 681 RLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHG-FLPNLISY 739

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
             LL G    G    A    + +  +    +   W +++  L    GH
Sbjct: 740 QYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQ-GH 786



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 196/381 (51%), Gaps = 5/381 (1%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P   TY+ +I +LC   ++  +   L  M   G  P+  +F SL+ GY    +   A DL
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           +++M   GF  + V+Y+ LI G C  G +DEA+ +  ++E+    P++ T++AL+ G   
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A        +  +M   G  P   AY  +V + C+     +A  ++ +M      P  VT
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
               +   C  GR+  A+++ + MK   C PN+ TYN ++ G   V +V +A  L+ ++ 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +CG++ ++VTYN ++ G C  G +  AF+LL  M   G   D  T+N++I A CK GKV+
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A  L D +   G   P+ +++ +++ G+C  G    A  +L+KM++ G  P+  T++  
Sbjct: 423 EACSLFDGLEYRG-IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 558 VRSLFSNLGHLGPVYILDDIM 578
           + +L    G    +  +D+++
Sbjct: 482 IENLCKTKGSREGLSFIDEML 502



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/495 (20%), Positives = 207/495 (41%), Gaps = 56/495 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            + G   + + MK++G   +   + +++  +  VG   +A+ +  ++RE G++P V  YN
Sbjct: 315 RMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYN 374

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     +        +   M+ +G+  + +TYN+L+ ALCK  +VD A  L   +  +
Sbjct: 375 LLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEA 184
           G  P++V++ T+++ +CK G+ + A     +  S         Y+  I  LCK     E 
Sbjct: 435 GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREG 494

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS---- 240
              + EM+ + + P+ + Y+ +I  L    N   +  I GQM   GC+P++ ++T+    
Sbjct: 495 LSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRA 554

Query: 241 -------------------------------LLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                                          L+ G+   G+T  A  +   M     +PN
Sbjct: 555 YCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN 614

Query: 270 VVAY----------------STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
              +                      +     + +   +   M++NS P +   Y A+++
Sbjct: 615 HFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILE 674

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF++   L   + + + M  +    N   YT +V   C+  M+  A +L+  M      P
Sbjct: 675 GFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLP 734

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N +++   + G    G+ D A ++   ++  E   +   +  ++DGL+R        +++
Sbjct: 735 NLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMI 794

Query: 434 TEIEKCGIQLNIVTY 448
           + +E+   + +  TY
Sbjct: 795 SILEQMKCKPSDETY 809



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/460 (21%), Positives = 184/460 (40%), Gaps = 56/460 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL QM+  GV      +  +I      G  E A ++   +   GL      YN ++DAL 
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      ++  ++  G+ PN  T+N ++  LCK  + D A   L +M + GCAPD  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTY 476

Query: 137 SYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEM 191
           +Y+  + ++CK     E      E+  +     +V Y  +I+ L KE     A  +  +M
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V  G  P+V+TY+T + + C+ G +  +  ++ +M   G   +  ++ +L+ G+   G+T
Sbjct: 537 VSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKT 596

Query: 252 HEASDLWNRMIREGFLPN------------------------------------------ 269
             A  +   M     +PN                                          
Sbjct: 597 DHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFEL 656

Query: 270 ---------VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
                      AY  ++ G      +DE  S+   M+E+  P N   Y++L++ F K   
Sbjct: 657 MKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRM 716

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A  +   MI +G  PN+++Y  ++          +A  +   + ++    + + +  
Sbjct: 717 YPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKI 776

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            I GL   G  D    ++  ++Q +C P+  TY  L + L
Sbjct: 777 IIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 272/556 (48%), Gaps = 19/556 (3%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  M+  G+S     + +++N++ R G+  +A  +  R+++ G+ PT   YN ++ A   
Sbjct: 227 LSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYAR 286

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA-PDAV 136
                    +   M  +G EP+++TYN+L   LC+  +VD A++L  EM   G   PD V
Sbjct: 287 LGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVV 346

Query: 137 SYTTIVSSICK-------LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +Y T+  +  K       L  +EE RE  ++  + +  +N +I GLCK+ ++E A   L 
Sbjct: 347 TYNTLADACFKCRCSSDALRLLEEMREKGVK--ATLVTHNIVIKGLCKDGELEGALGCLN 404

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M D G+ P+VITY+T+I + C  GN+  +  ++ +M  RG   +  +  ++L       
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  EA  L     + GF+P+ V+Y T++       + + A+ +  +M E    P+++TY+
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYN 524

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI G ++ G L  A    N ++  G  P+   Y  ++   C+      A     KM   
Sbjct: 525 TLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVEN 584

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           +  P+ VT NT + GLC  G++D A+KL +   +     ++ TYN L+  + +   V  A
Sbjct: 585 SFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTA 644

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                ++E  G+Q +  TYN +L  +  AG   EA  +L K+   GT   + +  ++   
Sbjct: 645 LHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLL--- 701

Query: 490 YCKQGKVNNAIQLLD-RIRGGGEWNP-DIIS--YTSLLWGICNSGGMQEAFIYLQKMLNE 545
             K   V+ A    D +       NP D  S  YT L+ G+C SG  +EA   L +M+ +
Sbjct: 702 --KPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQK 759

Query: 546 GICPNFATWNVLVRSL 561
           G+  + +T+  L+  L
Sbjct: 760 GMSVDSSTYITLMEGL 775



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 217/476 (45%), Gaps = 72/476 (15%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +A+R       +N L++  C +  + +A   L  M   G+ P+ +TY+T++++ C  G +
Sbjct: 196 VALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGML 255

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +L +M   G  P   ++ +L+  Y   G   +A+ +   M   GF P++  Y+ L
Sbjct: 256 GEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVL 315

Query: 277 IHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALID---------------------- 313
             GLC  G +DEA  +  +ME   +  P+V TY+ L D                      
Sbjct: 316 AAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKG 375

Query: 314 -------------GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
                        G  K G L GA    N+M  +G +P+V+ Y  ++   C+     +A+
Sbjct: 376 VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAY 435

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW--------------------------- 393
           +L+++M       +T T NT +  LC   R +                            
Sbjct: 436 TLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAY 495

Query: 394 --------AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
                   A++L D+M + +  P+I+TYN L+ GL R+ R+KEA + + E+ + G+  + 
Sbjct: 496 FKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDD 555

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TYN I+H  C+ G +  AFQ   KM+    K D +T N ++   C  GK++ A++L + 
Sbjct: 556 TTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFES 615

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               G+   D+I+Y +L+  +C  G +  A  +   M   G+ P+  T+NV++ +L
Sbjct: 616 WVEKGK-KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 670



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 237/521 (45%), Gaps = 78/521 (14%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL +MK +GV+ +   + +++++Y R+G  +QA K+   +   G +P +  YN +L 
Sbjct: 258 ARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYN-VLA 316

Query: 74  ALLAE--------------NRFSMINP-----------------------IYSNMKRDGM 96
           A L +               R   + P                       +   M+  G+
Sbjct: 317 AGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGV 376

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +  + T+NI++K LCK+  ++GA   L +M + G APD ++Y T++ + CK G + +A  
Sbjct: 377 KATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYT 436

Query: 157 LA---MRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           L    +R G  +  +  N ++  LCKE + EEA  LL     RG  P+ ++Y T++++  
Sbjct: 437 LMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYF 496

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
              N E +L +  +M  +   P+I ++ +L+KG    GR  EA D  N ++ +G +P+  
Sbjct: 497 KEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDT 556

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ +IH  C  G ++ A     +M ENS  P+V T + L++G    G L  A +++   
Sbjct: 557 TYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESW 616

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  G   +V+ Y  +++ +C++     A      M      P+  T+N  +  L   GR 
Sbjct: 617 VEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRT 676

Query: 392 DWAMKLL------------------------------DQMKQYECLPNIT-----TYNEL 416
           + A  +L                              D   + E + N        Y +L
Sbjct: 677 EEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKL 736

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           ++GL    + KEA  ++ E+ + G+ ++  TY T++ G+ +
Sbjct: 737 VNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 205/425 (48%), Gaps = 10/425 (2%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +C  D ++ LL++M+ +GV  +      VI    + G  E AL    ++ + GL P V  
Sbjct: 359 RCSSDALR-LLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVIT 417

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++ A       +    +   M R G++ + FT N +L  LCK  R + A  LL    
Sbjct: 418 YNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPP 477

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
            +G  PD VSY T++++  K    E A  L       +    +S YN LI GL +  +++
Sbjct: 478 QRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLK 537

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA   L E++++G+ P+  TY+ II + C  G++E +     +M      P++ +  +L+
Sbjct: 538 EAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLM 597

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G  L G+  +A  L+   + +G   +V+ Y+TLI  +C +G +D A+     ME     
Sbjct: 598 NGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQ 657

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  TY+ ++   ++AG    A  + +++  +G      + + ++K    +       + 
Sbjct: 658 PDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFS-SPLLKPSSVDEAESGKDAK 716

Query: 363 IEKMAFENCPPNTVT--FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            E+   EN P ++ +  +   + GLC  G+   A  +LD+M Q     + +TY  L++GL
Sbjct: 717 TEEETVEN-PQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775

Query: 421 LRVNR 425
           ++  +
Sbjct: 776 VKRQK 780



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 189/376 (50%), Gaps = 5/376 (1%)

Query: 196 IDPNVITYSTIISSLCDVGNV--ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           + P++   + ++S+L    +   + SL     +     +PN ++F  L+  +   G   +
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A    + M   G  P+ V Y+TL++  C  G + EA ++  +M+++   P   TY+ L+ 
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA-FENCP 372
            +A+ G +  A+++   M +NG  P++  Y  +   LCQ     +A  L ++M       
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ VT+NT       C     A++LL++M++      + T+N ++ GL +   ++ A   
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + ++   G+  +++TYNT++H  C+AG + +A+ L+ +M+  G KLD  T N ++Y  CK
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCK 462

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           + +   A  LL      G + PD +SY +++         + A     +M+ + + P+ +
Sbjct: 463 EKRYEEAQGLLQSPPQRG-FMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIS 521

Query: 553 TWNVLVRSLFSNLGHL 568
           T+N L++ L S +G L
Sbjct: 522 TYNTLIKGL-SRMGRL 536



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 4/328 (1%)

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           D +  ++     PN   ++ L+H  CS G++ +A+S    M+     P+  TY+ L++  
Sbjct: 190 DAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAH 249

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            + G L  A  +  RM  +G +P    Y  +V    +     QA  ++E M      P+ 
Sbjct: 250 CRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDL 309

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQY-ECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            T+N    GLC  G+VD A +L D+M++    LP++ TYN L D   +     +A  L+ 
Sbjct: 310 WTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLE 369

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + G++  +VT+N ++ G+C+ G +  A   L KM  +G   D IT+N +I+A+CK G
Sbjct: 370 EMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAG 429

Query: 495 KVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            +  A  L+D  +R G +   D  +  ++L+ +C     +EA   LQ     G  P+  +
Sbjct: 430 NIAKAYTLMDEMVRRGLKL--DTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVS 487

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +  ++ + F        + + D+++  K
Sbjct: 488 YGTVMAAYFKEYNSEPALRLWDEMIEKK 515


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 251/515 (48%), Gaps = 32/515 (6%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   +ALK++ R+   G+KP++K Y+ ++ AL        I  +   MK  G+ PN++TY
Sbjct: 214 GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY 273

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
            I ++AL +  R+D A+ +  EM ++GC PD ++YT                        
Sbjct: 274 TICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYT------------------------ 309

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
                  LI+ LC   K+++A  L  +M      P+ +TY T++     VG++ET     
Sbjct: 310 ------VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFW 363

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M V G  P++ ++T L++     G    A D+ + M  +G  PN+  Y+T+I GL   
Sbjct: 364 NEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKA 423

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +DEA+ +   ME     P   +Y   ID + K+G+   A   +  M   G  P++ A 
Sbjct: 424 RRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAAC 483

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +  L +     +A  +   +      P++VT+N  +K     G++D A +LL +M  
Sbjct: 484 NASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMIS 543

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
             C P++   N L++ L +  RV  A+++   ++   +   +VTYN +L G+ + G +++
Sbjct: 544 KGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILK 603

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A +L G M   G   + ITFN ++    K   V+ A+++  R+      NPD+++Y +++
Sbjct: 604 ALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN-CNPDVLTYNTII 662

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +G+   G +  AF +  +M  + + P++ T   L+
Sbjct: 663 YGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLI 696



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/637 (24%), Positives = 290/637 (45%), Gaps = 77/637 (12%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI  L +   +D    LL+ M+  GV  +   ++  I+ Y + G   +A+  F  +++ G
Sbjct: 416  MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            + P++   N  L  L    R S    I++++ + G+ P+  TYN+L+K   K  ++D A 
Sbjct: 476  IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            +LL EM +KGC PD +   ++++++ K G+V+ A     R   ++    V  YN L+ GL
Sbjct: 536  QLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGL 595

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             KE KI +A  L   M + G  PN IT+++++  L     V+ +L +  +M +  CNP++
Sbjct: 596  GKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDV 655

Query: 236  HSFTS----------------------------------LLKGYLLGGRTHEA------- 254
             ++ +                                  L+ G +  GR  +A       
Sbjct: 656  LTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEF 715

Query: 255  ---------SDLWNRMIR----EGFLPNVVAYS----------------TLIHGLCSNGS 285
                     S  W  ++     E  +   ++++                 LI  LC    
Sbjct: 716  VHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKK 775

Query: 286  MDEAVSVSYQMEEN-SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
              +A +V  +  +N    P + +Y+ L+DG   +     A +++  M S G  PN   Y 
Sbjct: 776  ALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYN 835

Query: 345  CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
             ++    ++   ++ + L  +M    C PN +T N  I  L     ++ A+ L  ++   
Sbjct: 836  LLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG 895

Query: 405  ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            +  P   TY  L+DGLL+  R ++A ++  E+   G   N V YN +++G  ++G +  A
Sbjct: 896  DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFA 955

Query: 465  FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +L  KM+ EG + D  ++ I++   C  G+++ A+Q  + ++  G  +PD +SY  ++ 
Sbjct: 956  CELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG-LDPDTVSYNFIIN 1014

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+  S  + EA     +M N GI P+  T+N L+  L
Sbjct: 1015 GLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 267/556 (48%), Gaps = 7/556 (1%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +ID    LL +M  +G      +  S+IN+  + G  + A KMF R++   L PTV  YN
Sbjct: 530  QIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYN 589

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L  L  E +      ++ +M   G  PN  T+N LL  L KN+ VD A K+   M   
Sbjct: 590  ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             C PD ++Y TI+  + + G+++ A     ++             LI G+ +  ++E+A 
Sbjct: 650  NCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAI 709

Query: 186  WLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             ++ E V +  +  N   +  ++  +     +E ++     +       + H    L+K 
Sbjct: 710  KVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKV 769

Query: 245  YLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                 +  +A +++++  +  G  P + +Y+ L+ GL  +   ++A+ +   M+     P
Sbjct: 770  LCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHP 829

Query: 304  NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
            N  TY+ L+D   K+  +     +++ M S GC PN + +  ++  L ++N  ++A  L 
Sbjct: 830  NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889

Query: 364  EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             ++   +  P   T+   I GL   GR + AMK+ ++M  Y C PN   YN L++G  + 
Sbjct: 890  YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKS 949

Query: 424  NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
              +  A EL  ++ K GI+ ++ +Y  ++  +C  G + EA Q   ++ + G   D +++
Sbjct: 950  GEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSY 1009

Query: 484  NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            N II    K  +++ A+ L   ++  G  +PD+ +Y +L+  +  +G +  A    +++ 
Sbjct: 1010 NFIINGLGKSRRLDEALSLFSEMKNRG-ISPDLYTYNALILHLGIAGKVDVAVKMYEELQ 1068

Query: 544  NEGICPNFATWNVLVR 559
              G+ P+  T+N L+R
Sbjct: 1069 LVGLEPSVFTYNALIR 1084



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 262/580 (45%), Gaps = 69/580 (11%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           + K    S SE   ++++ S      A    K+  ++  F    T    N++L+ L  + 
Sbjct: 88  KRKKNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNF--VHTTDACNYMLEILREQR 145

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
           R   +  ++  M++  +  N+ TY  + KAL     +  A   L +M   G   +A SY 
Sbjct: 146 RIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYN 205

Query: 140 TIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            ++                          + L+ G C      EA  +   M+  G+ P+
Sbjct: 206 GLI--------------------------HLLLPGFC-----NEALKVYKRMISEGMKPS 234

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           + TYS ++ +L   G+    + +L +M   G  PNI+++T  ++      R  +A  ++ 
Sbjct: 235 MKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFK 294

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  EG  P+V+ Y+ LI  LC+ G +D+A  +  +M  +S  P+  TY  L+D F K G
Sbjct: 295 EMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVG 354

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L    + WN M  +G +P+VV YT +++ LC++    +A  +++ M  +   PN  T+N
Sbjct: 355 DLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYN 414

Query: 380 TFIKGLCGCGRVDWAMKLLDQ-----------------------------------MKQY 404
           T I GL    R+D A++LL+                                    MK+ 
Sbjct: 415 TMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR 474

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             +P+I   N  L  L    R+ EA ++  ++ KCG+  + VTYN ++    +AG + +A
Sbjct: 475 GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKA 534

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            QLL +M+ +G + D +  N +I    K G+V+ A ++  R++   +  P +++Y  LL 
Sbjct: 535 TQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK-NLKLAPTVVTYNILLT 593

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G+   G + +A      M   G  PN  T+N L+  L  N
Sbjct: 594 GLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 246/540 (45%), Gaps = 43/540 (7%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG++ +I     L   M   G   +   F S+++   +    + ALKMF R+    
Sbjct: 591  LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P V  YN I+  L+ E R       +  MK+  + P+  T   L+  + ++ RV+ A 
Sbjct: 651  CNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKK-FLSPDYVTLCTLIPGVVRHGRVEDAI 709

Query: 121  KLLVEMGNKGC--------------------APDAVSYTTI----------------VSS 144
            K+++E  ++ C                      +A+S+  I                +  
Sbjct: 710  KVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKV 769

Query: 145  ICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            +CK  +  +A+ +  +F   + +      YN L++GL   +  E+A  L  +M   G  P
Sbjct: 770  LCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHP 829

Query: 199  NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
            N  TY+ ++ +      +     +  +M  RGC PN  +   ++   +     ++A DL+
Sbjct: 830  NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889

Query: 259  NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
              ++   F P    Y  LI GL   G  ++A+ +  +M +  C PN   Y+ LI+GF K+
Sbjct: 890  YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKS 949

Query: 319  GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
            G +  A +++ +M+  G  P++ +YT +V+ LC      +A    E++      P+TV++
Sbjct: 950  GEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSY 1009

Query: 379  NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            N  I GL    R+D A+ L  +MK     P++ TYN L+  L    +V  A ++  E++ 
Sbjct: 1010 NFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQL 1069

Query: 439  CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             G++ ++ TYN ++ G   +G   +AF +  KM++ G   +  TF  +   Y + G V+N
Sbjct: 1070 VGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHN 1129



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 174/377 (46%), Gaps = 30/377 (7%)

Query: 57   REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
            +  G+ PT++ YN ++D LL  N       ++ +MK  G  PN FTYN+LL A  K+ R+
Sbjct: 788  KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRI 847

Query: 117  DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLC 176
            +  Y L  EM ++GC P+A+++                              N +I+ L 
Sbjct: 848  NKLYDLYSEMRSRGCEPNAITH------------------------------NIIISALV 877

Query: 177  KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
            K + + +A  L  E++     P   TY  +I  L   G  E ++ I  +M   GC PN  
Sbjct: 878  KSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSV 937

Query: 237  SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
             +  L+ G+   G    A +L+ +M++EG  P++ +Y+ L+  LC  G +DEAV    ++
Sbjct: 938  IYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL 997

Query: 297  EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +     P+  +Y+ +I+G  K+  L  A  +++ M + G SP++  Y  ++  L      
Sbjct: 998  KLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKV 1057

Query: 357  HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
              A  + E++      P+  T+N  I+G    G  D A  +  +M    C PN  T+ +L
Sbjct: 1058 DVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117

Query: 417  LDGLLRVNRVKEAFELV 433
             +   R   V   F  V
Sbjct: 1118 PNKYPRAGLVHNPFGAV 1134



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 182/403 (45%), Gaps = 36/403 (8%)

Query: 63   PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
            P +K+      AL A+N F          K  G+ P + +YN L+  L  +N  + A +L
Sbjct: 765  PLIKVLCKRKKALDAQNVFDKFT------KNLGIHPTLESYNCLMDGLLGSNFTEKALEL 818

Query: 123  LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIE 182
              +M + G  P+  +Y                              N L++   K  +I 
Sbjct: 819  FEDMKSAGTHPNNFTY------------------------------NLLLDAHGKSKRIN 848

Query: 183  EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            + + L  EM  RG +PN IT++ IIS+L    N+  +L +  ++     +P   ++  L+
Sbjct: 849  KLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLI 908

Query: 243  KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             G L  GR+ +A  ++  M+  G  PN V Y+ LI+G   +G +D A  +  +M +    
Sbjct: 909  DGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIR 968

Query: 303  PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            P++ +Y+ L++     G +  A Q +  +   G  P+ V+Y  ++  L ++    +A SL
Sbjct: 969  PDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSL 1028

Query: 363  IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
              +M      P+  T+N  I  L   G+VD A+K+ ++++     P++ TYN L+ G   
Sbjct: 1029 FSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSL 1088

Query: 423  VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
                 +AF +  ++   G   N  T+  + +   RAG+V   F
Sbjct: 1089 SGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPF 1131


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 264/519 (50%), Gaps = 15/519 (2%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNH--ILDALLAENRFSMINPIYSNMKRDGMEP 98
           R+ G A   L +  + R F       +YNH  +L  L           +   M+R+ + P
Sbjct: 121 RKTGFAFGVLALMLK-RGFAFN----VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMP 175

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           +VF+YN +++  C+   ++ A +L  EM   GC+   V++  ++ + CK G+++EA    
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235

Query: 155 RELA-MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           +E+  M   + + VY +LI G C   +++    L  E+++RG  P  ITY+T+I   C +
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G ++ +  I   M  RG  PN++++T L+ G    G+T EA    N MI +   PN V Y
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTY 355

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + +I+ LC +G + +AV +   M++    P+  TY+ L+ G    G+L  AS++   M+ 
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLK 415

Query: 334 NG--CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +     P+V++Y  ++  LC+ N  HQA  + + +  +    + VT N  +      G V
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDV 475

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + AM+L  Q+   + + N  TY  ++DG  +   +  A  L+ ++    +Q ++  YN +
Sbjct: 476 NKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCL 535

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           L  +C+ G + +A++L  +M  +    D ++FNI+I    K G + +A  LL  +   G 
Sbjct: 536 LSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG- 594

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            +PD+ +Y+ L+      G + EA  +  KM++ G  P+
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/497 (29%), Positives = 247/497 (49%), Gaps = 9/497 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M + G   NV+ +NILLK LC+N     A  LL EM      PD  SY T++   C+  +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192

Query: 151 VEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +E+A ELA    GSG S     +  LI+  CK  K++EA   L EM   G++ +++ Y++
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   CD G ++    +  ++  RG +P   ++ +L++G+   G+  EAS+++  MI  G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNV  Y+ LI GLC  G   EA+     M E    PN  TY+ +I+   K G +  A 
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--CPPNTVTFNTFIK 383
           +I   M      P+ + Y  ++  LC      +A  L+  M  ++    P+ +++N  I 
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC   R+  A+ + D + +     +  T N LL+  L+   V +A EL  +I    I  
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N  TY  ++ G C+ GM+  A  LL KM +   +     +N ++ + CK+G ++ A +L 
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + ++    + PD++S+  ++ G   +G ++ A   L  M   G+ P+  T++ L+   F 
Sbjct: 553 EEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR-FL 610

Query: 564 NLGHLGPVYILDDIMAN 580
            LG+L       D M +
Sbjct: 611 KLGYLDEAISFFDKMVD 627



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 245/497 (49%), Gaps = 7/497 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+   +      + +VI  +      E+AL++   ++  G   ++  +  ++DA  
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +          MK  G+E ++  Y  L++  C    +D    L  E+  +G +P A+
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CKLGQ++EA E+       GV      Y  LI+GLC   K +EA   L  M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM 343

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++  +PN +TY+ II+ LC  G V  ++ I+  M  R   P+  ++  LL G    G  
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 252 HEASDLWNRMIREGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            EAS L   M+++     P+V++Y+ LIHGLC    + +A+ +   + E     +  T +
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L++   KAG++  A ++W ++  +    N   YT M+   C+  M + A  L+ KM   
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+   +N  +  LC  G +D A +L ++M++    P++ ++N ++DG L+   +K A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L+  + + G+  ++ TY+ +++   + G + EA     KM+  G + DA   + ++  
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 490 YCKQGKVNNAIQLLDRI 506
              QG+ +   +L+ ++
Sbjct: 644 CISQGETDKLTELVKKL 660



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 209/410 (50%), Gaps = 7/410 (1%)

Query: 157 LAMRFGSGVSVYNA--LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           L ++ G   +VYN   L+ GLC+  +  +A  LL EM    + P+V +Y+T+I   C+  
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +E +L +  +M   GC+ ++ ++  L+  +   G+  EA      M   G   ++V Y+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +LI G C  G +D   ++  ++ E    P   TY+ LI GF K G L  AS+I+  MI  
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PNV  YT ++  LC      +A   +  M  ++  PN VT+N  I  LC  G V  A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--IQLNIVTYNTIL 452
           +++++ MK+    P+  TYN LL GL     + EA +L+  + K       ++++YN ++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALI 431

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-E 511
           HG+C+   + +A  +   ++ +    D +T NI++ +  K G VN A++L  +I      
Sbjct: 432 HGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            N D  +YT+++ G C +G +  A   L KM    + P+   +N L+ SL
Sbjct: 492 RNSD--TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 198/391 (50%), Gaps = 1/391 (0%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L+  L +    E AF    +M++     N ++ S ++     +     + G+L  M  RG
Sbjct: 78  LMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRG 137

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
              N+++   LLKG        +A  L   M R   +P+V +Y+T+I G C    +++A+
Sbjct: 138 FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKAL 197

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            ++ +M+ + C  ++ T+  LID F KAG +  A      M   G   ++V YT +++  
Sbjct: 198 ELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGF 257

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C      +  +L +++      P  +T+NT I+G C  G++  A ++ + M +    PN+
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  L+DGL  V + KEA + +  + +   + N VTYN I++ +C+ G+V +A +++  
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD-RIRGGGEWNPDIISYTSLLWGICNS 529
           M    T+ D IT+NI++   C +G ++ A +LL   ++     +PD+ISY +L+ G+C  
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
             + +A      ++ +    +  T N+L+ S
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNS 468



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 205/409 (50%), Gaps = 16/409 (3%)

Query: 167 VYNALING----------LCKEH--KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           VY+ L+N           LC++   +++ A  +  + VD G        S +++ L    
Sbjct: 28  VYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSG-SSLAFAGSNLMAKLVRSR 86

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           N E +     +M       N  S + LL+ Y+   +T  A  +   M++ GF  NV  ++
Sbjct: 87  NHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHN 146

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L+ GLC N    +AVS+  +M  NS  P+V +Y+ +I GF +   L  A ++ N M  +
Sbjct: 147 ILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGS 206

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GCS ++V +  ++   C+     +A   +++M F     + V + + I+G C CG +D  
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             L D++ +    P   TYN L+ G  ++ ++KEA E+   + + G++ N+ TY  ++ G
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C  G   EA Q L  M+ +  + +A+T+NIII   CK G V +A+++++ ++      P
Sbjct: 327 LCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK-KRRTRP 385

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEG--ICPNFATWNVLVRSL 561
           D I+Y  LL G+C  G + EA   L  ML +     P+  ++N L+  L
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 206/465 (44%), Gaps = 7/465 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +  ++D     L++MK  G+     V+ S+I  +   G  ++   +F  + E G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++       +    + I+  M   G+ PNV+TY  L+  LC   +   A 
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
           + L  M  K   P+AV+Y  I++ +CK G V +A E+       R       YN L+ GL
Sbjct: 338 QPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 176 CKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C +  ++EA  LL  M+      DP+VI+Y+ +I  LC    +  +L I   +  +    
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  +   LL   L  G  ++A +LW ++     + N   Y+ +I G C  G ++ A  + 
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M  +   P+V  Y+ L+    K G+L  A +++  M  +   P+VV++  M+    + 
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A SL+  M+     P+  T++  I      G +D A+   D+M      P+    
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           + +L   +      +  ELV ++    I L+     T++  +C +
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNS 682


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 165/603 (27%), Positives = 269/603 (44%), Gaps = 75/603 (12%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
            VF  +I    R  +   A++ FY +   GL P+V   N +L +L+ E +  M    +  
Sbjct: 106 AVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKG 165

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ P+V T+NILL ALC+  +   A  LL +M   G  P AV+Y T+++  CK G+
Sbjct: 166 MLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGR 225

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            + A +L     +   G  V  YN  I+ LC++ +  + + LL  M    + PN ITY+T
Sbjct: 226 YKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNT 285

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS     G +E +  +  +M +    PN  ++ +L+ G+   G   EA  L + M+  G
Sbjct: 286 LISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHG 345

Query: 266 FLPNVV-----------------------------------AYSTLIHGLCSNGSMDEAV 290
             PN V                                   +Y+ +I GLC NG ++EAV
Sbjct: 346 LRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAV 405

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY------- 343
            +   M + S  P+V T+S LI+GF + G +  A +I  +M   G  PN + Y       
Sbjct: 406 QLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNY 465

Query: 344 --------------------------TC--MVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
                                     TC  +V   C+     +A   +  M+     PN+
Sbjct: 466 CKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNS 525

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VTF+  I G    G    A  + D+M  +   P++ TY  LL GL     + EA +    
Sbjct: 526 VTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHR 585

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +      ++ V +NT L   CR+G + +A  L+ +M+      D  T+  +I   CK+GK
Sbjct: 586 LRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGK 645

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           +  A+ L  +    G  +P+   YTSL+ G+   G  + A    ++MLN+ + P+   +N
Sbjct: 646 IVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFN 705

Query: 556 VLV 558
           V++
Sbjct: 706 VII 708



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/603 (24%), Positives = 279/603 (46%), Gaps = 50/603 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L E+ +     +LL++M+  GV  +   + +++N Y + G  + A ++   +   G
Sbjct: 181 LLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG 240

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +   V  YN  +D L  ++R +    +   M+R+ + PN  TYN L+    +  +++ A 
Sbjct: 241 IGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVAT 300

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---------------------- 158
           K+  EM      P++++Y T+++  C  G + EA  L                       
Sbjct: 301 KVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGL 360

Query: 159 ---------------MRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                          MR G GV V    Y A+I+GLCK   +EEA  LL +M+   ++P+
Sbjct: 361 YKNAEFGMVSSILERMRMG-GVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPD 419

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+T+S +I+    VG +  +  I+ +M+  G  PN   +++L+  Y   G   EA + + 
Sbjct: 420 VVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYA 479

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M   G + +    + L+   C  G ++EA      M      PN  T+  +I+G+  +G
Sbjct: 480 VMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSG 539

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT-- 377
           + L A  ++++M S G  P++  Y  ++K LC     ++A     ++    C PN V   
Sbjct: 540 DALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRL---RCIPNAVDNV 596

Query: 378 -FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE- 435
            FNT +   C  G +  A+ L+++M   + LP+  TY  L+ GL +  ++  A  L  + 
Sbjct: 597 IFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKA 656

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           IEK  +  N   Y +++ G+ + G    A  +  +ML +  + D + FN+II  Y ++GK
Sbjct: 657 IEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGK 716

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
            +    +L  ++       ++ +Y  LL G      M   F+  + M+  G  P+  +W+
Sbjct: 717 TSKVNDILSTMK-SKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWH 775

Query: 556 VLV 558
            L+
Sbjct: 776 SLI 778



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 229/467 (49%), Gaps = 31/467 (6%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P+V+T N++L +L K  +VD  +     M  KG  PD                    
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPD-------------------- 174

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                     V+ +N L+N LC+  K + A +LL +M + G+ P  +TY+T+++  C  G
Sbjct: 175 ----------VATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKG 224

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             + +  ++  M  +G   ++ ++   +       R+ +   L  RM R    PN + Y+
Sbjct: 225 RYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYN 284

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           TLI G    G ++ A  V  +M   +  PN  TY+ LI G    GN+  A ++ + M+S+
Sbjct: 285 TLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSH 344

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  PN V Y  ++  L +N  F    S++E+M       + +++   I GLC  G ++ A
Sbjct: 345 GLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEA 404

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           ++LLD M +    P++ T++ L++G  RV ++  A E++ ++ K G+  N + Y+T+++ 
Sbjct: 405 VQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYN 464

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+ G + EA      M   G   D  T N+++  +C+ GK+  A   ++ +   G  +P
Sbjct: 465 YCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG-LDP 523

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + +++  ++ G  NSG   +AF    KM + G  P+  T+  L++ L
Sbjct: 524 NSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 235/527 (44%), Gaps = 13/527 (2%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +++  +Y +  M   G+  +   F  +IN Y   G A +A  +F ++  FG  P++  Y 
Sbjct: 505  KLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYG 564

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFT---YNILLKALCKNNRVDGAYKLLVEM 126
             +L  L        IN       R    PN      +N  L + C++  +  A  L+ EM
Sbjct: 565  GLLKGLCIGGH---INEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEM 621

Query: 127  GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHK 180
                  PD  +YT +++ +CK G++  A  L+ +           +VY +L++GL K   
Sbjct: 622  VTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGH 681

Query: 181  IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
               A ++  EM+++ ++P+ + ++ II      G       IL  M  +    N+ ++  
Sbjct: 682  ARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNI 741

Query: 241  LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
            LL GY           L+  MIR GFLP+  ++ +LI G C + S D A+ +   +    
Sbjct: 742  LLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEG 801

Query: 301  CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
               +  T++ LI  F +   +  A ++  +M      PNV  Y  +   L + + FH+AH
Sbjct: 802  HVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAH 861

Query: 361  SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
             +++ +      P    + T I G+C  G +  AMKL D+MK      +    + ++ GL
Sbjct: 862  RVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGL 921

Query: 421  LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                +++ A  ++  + +  I   + T+ T++H  C+   V +A +L   M     KLD 
Sbjct: 922  ANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDV 981

Query: 481  ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
            + +N++I   C  G +  A +L + ++    W P+   Y  L+   C
Sbjct: 982  VAYNVLISGLCANGDIEAAFKLYEEMKQRDLW-PNTSIYIVLIDSFC 1027



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/637 (22%), Positives = 273/637 (42%), Gaps = 77/637 (12%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            MI+ L +   ++    LL  M    V+     F  +IN + RVG    A ++  ++ + G
Sbjct: 391  MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450

Query: 61   LKP-----TVKIYNHILDALLAE--NRFSMINP--------------------------- 86
            L P     +  IYN+     L E  N ++++N                            
Sbjct: 451  LVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAE 510

Query: 87   -IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
               ++M R G++PN  T++ ++     +     A+ +  +M + G  P   +Y  ++  +
Sbjct: 511  YFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGL 570

Query: 146  CKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            C  G + EA +   R           ++N  +   C+   + +A  L+ EMV     P+ 
Sbjct: 571  CIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDN 630

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWN 259
             TY+ +I+ LC  G +  +L + G+   +G  +PN   +TSL+ G L  G    A  ++ 
Sbjct: 631  FTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFE 690

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             M+ +   P+ VA++ +I      G   +   +   M+  +   N+ TY+ L+ G+AK  
Sbjct: 691  EMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRH 750

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             +     ++  MI +G  P+  ++  ++   CQ+  F  A  ++  +  E    +  TFN
Sbjct: 751  AMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFN 810

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I   C    +  A +L+ QM Q+  +PN+ TYN L +GL+R +   +A  ++  + + 
Sbjct: 811  MLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLES 870

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG-----TKLDAI------------- 481
            G       Y T+++G+CR G +  A +L  +M   G       + AI             
Sbjct: 871  GSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENA 930

Query: 482  -----------------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
                             TF  +++ YCK+  V  A++ L  I        D+++Y  L+ 
Sbjct: 931  IWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALE-LRSIMEHCHVKLDVVAYNVLIS 989

Query: 525  GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G+C +G ++ AF   ++M    + PN + + VL+ S 
Sbjct: 990  GLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 188/399 (47%), Gaps = 1/399 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           S  +V++ LI    +   + +A      M  RG++P+V T + ++ SL     V+     
Sbjct: 103 SNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSF 162

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
              M  +G  P++ +F  LL      G+   A  L  +M   G  P  V Y+TL++  C 
Sbjct: 163 FKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCK 222

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G    A  +   M       +V TY+  ID   +         +  RM  N   PN + 
Sbjct: 223 KGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEIT 282

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++    +      A  + ++M+  N  PN++T+NT I G C  G +  A++L+D M 
Sbjct: 283 YNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMV 342

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
            +   PN  TY  LL+GL +         ++  +   G++++ ++Y  ++ G+C+ GM+ 
Sbjct: 343 SHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLE 402

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           EA QLL  ML      D +TF+++I  + + GK+NNA +++ ++   G   P+ I Y++L
Sbjct: 403 EAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG-LVPNGILYSTL 461

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++  C  G ++EA      M + G   +  T NVLV + 
Sbjct: 462 IYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATF 500



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 156/332 (46%), Gaps = 1/332 (0%)

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           CN N   F  L++  L      +A   +  M   G  P+V   + ++  L     +D   
Sbjct: 101 CNSNPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFW 160

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S    M      P+V T++ L++   + G    A  +  +M  +G  P  V Y  ++   
Sbjct: 161 SFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWY 220

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+   +  A  LI+ MA +    +  T+N FI  LC   R      LL +M++    PN 
Sbjct: 221 CKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNE 280

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN L+ G +R  +++ A ++  E+    +  N +TYNT++ G C  G + EA +L+  
Sbjct: 281 ITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDV 340

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M+  G + + +T+  ++    K  +      +L+R+R GG      ISYT+++ G+C +G
Sbjct: 341 MVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGG-VRVSHISYTAMIDGLCKNG 399

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++EA   L  ML   + P+  T++VL+   F
Sbjct: 400 MLEEAVQLLDDMLKVSVNPDVVTFSVLINGFF 431



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 183/412 (44%), Gaps = 30/412 (7%)

Query: 26   VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
            +S +  V+ S+++   + G A  AL +F  +    ++P    +N I+D    + + S +N
Sbjct: 662  LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721

Query: 86   PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
             I S MK   +  N+ TYNILL    K + +   + L  +M   G  PD  S+       
Sbjct: 722  DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSW------- 774

Query: 146  CKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
                                   ++LI G C+    + A  +L  +   G   +  T++ 
Sbjct: 775  -----------------------HSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNM 811

Query: 206  IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            +I+  C+   ++ +  ++ QM      PN+ ++ +L  G +     H+A  +   ++  G
Sbjct: 812  LITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESG 871

Query: 266  FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             +P    Y TLI+G+C  G++  A+ +  +M+      +    SA++ G A +  +  A 
Sbjct: 872  SVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAI 931

Query: 326  QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
             + + M+     P V  +T ++ V C+     +A  L   M   +   + V +N  I GL
Sbjct: 932  WVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGL 991

Query: 386  CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
            C  G ++ A KL ++MKQ +  PN + Y  L+D     N   E+ +L+ +I+
Sbjct: 992  CANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQ 1043



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 148/325 (45%), Gaps = 6/325 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I++   K +   V  +L  MK + +  +   +  +++ Y +     +   ++  +   G
Sbjct: 707  IIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHG 766

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P    ++ ++        F +   I   +  +G   + FT+N+L+   C+ N +  A+
Sbjct: 767  FLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAF 826

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGV----SVYNALINGL 175
            +L+ +M      P+  +Y  + + + +     +A R L +   SG       Y  LING+
Sbjct: 827  ELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGM 886

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            C+   I+ A  L  EM   GI  + +  S I+  L +   +E ++ +L  M      P +
Sbjct: 887  CRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTV 946

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +FT+L+  Y       +A +L + M       +VVAY+ LI GLC+NG ++ A  +  +
Sbjct: 947  ATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEE 1006

Query: 296  MEENSCPPNVTTYSALIDGFAKAGN 320
            M++    PN + Y  LID F  AGN
Sbjct: 1007 MKQRDLWPNTSIYIVLIDSFC-AGN 1030



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 93/241 (38%), Gaps = 41/241 (17%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            +L+ + +EG       F  +I  +      ++A ++  ++ +F + P V  YN + + L+
Sbjct: 793  ILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLI 852

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA---- 132
              + F   + +   +   G  P    Y  L+  +C+   + GA KL  EM   G +    
Sbjct: 853  RTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNV 912

Query: 133  -------------------------------PDAVSYTTIVSSICKLGQVEEARELAM-- 159
                                           P   ++TT++   CK   V +A EL    
Sbjct: 913  AMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIM 972

Query: 160  ---RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                    V  YN LI+GLC    IE AF L  EM  R + PN   Y  +I S C  GN 
Sbjct: 973  EHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFC-AGNY 1031

Query: 217  E 217
            +
Sbjct: 1032 Q 1032


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 258/544 (47%), Gaps = 47/544 (8%)

Query: 61  LKPTVKIYNHILD----ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
            +P V+ +N ++     A   E  F++I  +  +    G+ P++ T+N++L  LCK+ +V
Sbjct: 150 FRPDVETWNVLITGYCLAREPEEAFAVIREMEEDF---GVAPSLKTHNLVLHGLCKSGKV 206

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNAL 171
             A     E   +     A +++ +++ + K G + +A  LA    +      +  Y A+
Sbjct: 207 LAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAI 265

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           +N L K  KI+EA  L+ ++   G  P + TY+ +++ LC +G +E ++ +L ++   GC
Sbjct: 266 VNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 325

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P++ ++TSL+ G     R+ EA  L+  M   G   + V Y+ LI GL   G + +A S
Sbjct: 326 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASS 385

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           V   M  + C P+V T S +IDG +KAG +  A +I+  M + G +PN V Y+ ++  LC
Sbjct: 386 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 445

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +      A  ++ +M    C P+T+T+N  I GLC  G V+ A    D+M +  C P++ 
Sbjct: 446 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 505

Query: 412 TYN------------------------------ELLDGLLRVNRVKEAFELVTEIEKCGI 441
           TYN                               L+DGL +  +++    L  E+E+ G+
Sbjct: 506 TYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV 565

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N  T   ++  +C+A  V EA  L   +  EG       +N II A  K GKVN    
Sbjct: 566 A-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGKVNEGQA 623

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   +     W PD ++Y +LL G+  +  M  A  Y  +M   G  P  +  + L    
Sbjct: 624 VYQEMTRW--WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADDR 681

Query: 562 FSNL 565
             ++
Sbjct: 682 LKDM 685



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 243/497 (48%), Gaps = 18/497 (3%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           RE      VKI+  + DA LA   F  ++       R G + +V T N LL    +  R 
Sbjct: 81  REISTDAVVKIFQCLKDADLAWELFQCLSS-----PRFGFQHSVHTGNALLDVFARTKRH 135

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV--YNA 170
             A  LL         PD  ++  +++  C   + EEA    RE+   FG   S+  +N 
Sbjct: 136 REAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNL 195

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +++GLCK  K+  A     E V R +  +  T+S +I+ L   G +  +  +  +    G
Sbjct: 196 VLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNG 254

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           C  +IH++T+++       +  EA  L  ++   G  P +  Y+ L++GLC  G ++EA+
Sbjct: 255 CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 314

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  ++ +N C P+V TY++LIDG  K      A +++  M S G + + V YT +++ L
Sbjct: 315 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 374

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            Q     QA S+ + M    C P+ VT +T I GL   GR+  A+++   M+     PN 
Sbjct: 375 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 434

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             Y+ L+ GL +  ++  A E++ +++K     + +TYN ++ G+C++G V  A     +
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           ML  G K D  T+NI+I   CK G  + A  +LD      + +     Y+SL+ G+C SG
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLD------DMSSSRFVYSSLVDGLCKSG 548

Query: 531 GMQEAFIYLQKMLNEGI 547
            ++   +   +M   G+
Sbjct: 549 KLEGGCMLFHEMERSGV 565



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 197/418 (47%), Gaps = 13/418 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+    G +     + +++N   +    ++A+ +  +I   G  PT+  YN +L+ L 
Sbjct: 246 LAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLC 305

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   +  +G  P+V TY  L+  L K  R   AYKL  EM ++G A D V
Sbjct: 306 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTV 365

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YT ++  + + G++ +A  +     S      V   + +I+GL K  +I  A  +   M
Sbjct: 366 CYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 425

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+ PN + YS +I  LC    ++ +L +L QM    C P+  ++  L+ G    G  
Sbjct: 426 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 485

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A   ++ M+  G  P+V  Y+ LI GLC  G+ D A  V   M  +        YS+L
Sbjct: 486 EAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-----FVYSSL 540

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG  K+G L G   +++ M  +G + N    T ++  LC+ N   +A SL   +  E  
Sbjct: 541 VDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 599

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            P+   +N+ I  L   G+V+    +  +M ++   P+  TYN LL+G++  NR+  A
Sbjct: 600 -PHPYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRMDRA 655



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 191/386 (49%), Gaps = 38/386 (9%)

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAV 290
            P++ ++  L+ GY L     EA  +   M  + G  P++  ++ ++HGLC +G +  A+
Sbjct: 151 RPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAM 210

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
              ++    S P +  T+S LI+G  KAG ++ A  +     +NGC+ ++  YT +V  L
Sbjct: 211 D-HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +N    +A +L+EK+    C P   T+N  + GLC  GR++ A+ LL ++    C P++
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN-------------------------- 444
            TY  L+DGL +  R  EA++L  E+   G+ L+                          
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389

Query: 445 ---------IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
                    +VT +T++ G+ +AG +  A ++   M   G   + + ++ +I+  CK  K
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           ++ A+++L +++      PD I+Y  L+ G+C SG ++ A  +  +ML  G  P+  T+N
Sbjct: 450 MDCALEMLAQMKKAF-CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 508

Query: 556 VLVRSLFSNLGHLGPVYILDDIMANK 581
           +L+  L           +LDD+ +++
Sbjct: 509 ILISGLCKAGNTDAACGVLDDMSSSR 534



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 203/423 (47%), Gaps = 13/423 (3%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L +  +I     L++++   G + +   + +++N   ++G  E+A+ +  +I + G  P 
Sbjct: 269 LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 328

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  Y  ++D L  E R      ++  M   G+  +   Y  L++ L +  ++  A  +  
Sbjct: 329 VVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK 388

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEH 179
            M + GC PD V+ +T++  + K G++  A  +     A        VY+ALI+GLCK  
Sbjct: 389 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 448

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K++ A  +L +M      P+ ITY+ +I  LC  G+VE +     +M   GC P+++++ 
Sbjct: 449 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 508

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+ G    G T  A  + + M    F+     YS+L+ GLC +G ++    + ++ME +
Sbjct: 509 ILISGLCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGKLEGGCMLFHEMERS 563

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
               N  T + LI    KA  +  A  ++N +   G  P+  AY  ++  L ++   ++ 
Sbjct: 564 GV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEG 621

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            ++ ++M      P+ VT+N  + G+ G  R+D A     +M     +P ++  ++L D 
Sbjct: 622 QAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADD 680

Query: 420 LLR 422
            L+
Sbjct: 681 RLK 683



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 159/345 (46%), Gaps = 13/345 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ LG++        L ++M   G++     + ++I    + G   QA  ++  +   G
Sbjct: 335 LIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHG 394

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V   + ++D L    R      I+ +M+  G+ PN   Y+ L+  LCK  ++D A 
Sbjct: 395 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 454

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           ++L +M    C PD ++Y  ++  +CK G VE AR      L       V  YN LI+GL
Sbjct: 455 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGL 514

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK    + A  +L +M       +   YS+++  LC  G +E    +  +M   G   N 
Sbjct: 515 CKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV-ANS 568

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + T L+       R  EA  L+N + +EG +P+  AY+++I  L  +G ++E  +V YQ
Sbjct: 569 QTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQAV-YQ 626

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                  P+  TY+AL++G   A  +  A   +  M   G  P V
Sbjct: 627 EMTRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPV 671


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 277/558 (49%), Gaps = 44/558 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL---AENRFSMINPIY 88
           +  + I +Y        A ++F R++   LKP +   N +++AL+   ++    +   I+
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIF 200

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S++ + G++ N  T+NIL+   C  N++  A  L+ +M +  C PD VSY TI+  +CK 
Sbjct: 201 SDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKK 260

Query: 149 GQVEEARELAMRFGSG----------------------------------------VSVY 168
           G++ EAR+L +   +                                         V  Y
Sbjct: 261 GKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTY 320

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LI GLCK+ KI+EAF L  EM +  + P+V+TY+T+I+   D  +      ++ +M  
Sbjct: 321 NMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEG 380

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +G  PN  ++  ++K Y+  G+   A +   +M   GF P+ V ++TLI+G C  G + E
Sbjct: 381 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSE 440

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  +  +M       N  T + ++        L  A ++ +     G   + V+Y  ++ 
Sbjct: 441 AFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIM 500

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
              ++    +A  L ++M  +   P+ +T+NT I GLC  G+ D ++  L+++ +   +P
Sbjct: 501 GYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVP 560

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           + TTYN ++ G  R  +V++AF+   ++ K   + ++ T N +L G+C  GM+ +A +L 
Sbjct: 561 DETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLF 620

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
              + +G  +DA+T+N II   CK+ +   A  LL  +    +  PD  +Y ++L  + +
Sbjct: 621 NTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEME-EKKLGPDCYTYNAILSALAD 679

Query: 529 SGGMQEAFIYLQKMLNEG 546
           +G M+EA  ++ +++ +G
Sbjct: 680 AGRMKEAEEFMSRIVEQG 697



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 147/495 (29%), Positives = 240/495 (48%), Gaps = 28/495 (5%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           I +  + A +A NR      I++ MKR  ++PN+ T N L+ AL +              
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVR-------------- 186

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
                 P       I S + KLG                + +N LI G C E+K+ EA  
Sbjct: 187 --YPSKPSVYLSKAIFSDVIKLG-----------VKVNTNTFNILIYGCCIENKLSEAIG 233

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L+ +M D    P+ ++Y+TI+  LC  G +  +  +L  M   G  PN ++F  L+ GY 
Sbjct: 234 LIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYC 293

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G   EA+ + + M +   LP+V  Y+ LI GLC +G +DEA  +  +ME     P+V 
Sbjct: 294 KLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVV 353

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ LI+G     + L   ++ ++M   G  PN V Y  +VK   +      A + + KM
Sbjct: 354 TYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 413

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 P+ VTFNT I G C  GR+  A +++D+M +     N  T N +L  L    ++
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 473

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A++L++   K G  ++ V+Y T++ G  + G  VEA +L  +M  +      IT+N +
Sbjct: 474 DDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTM 533

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I   C  GK + +I  L+ +   G   PD  +Y +++ G C  G +++AF +  KM+ + 
Sbjct: 534 IGGLCHSGKTDQSIDKLNELLESG-LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592

Query: 547 ICPNFATWNVLVRSL 561
             P+  T N+L+R L
Sbjct: 593 FKPDLFTCNILLRGL 607



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 257/541 (47%), Gaps = 27/541 (4%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A+ +  ++++F   P    YN ILD L  + + +    +  +MK +G+ PN  T+NIL+
Sbjct: 230 EAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILV 289

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFG 162
              CK   +  A +++  M      PD  +Y  ++  +CK G+++EA  L      ++  
Sbjct: 290 SGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLL 349

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V  YN LING        + F L+ +M  +G+ PN +TY+ ++      G ++ +   
Sbjct: 350 PDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 409

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M   G +P+  +F +L+ GY   GR  EA  + + M R+G   N V  +T++H LC 
Sbjct: 410 LRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 469

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              +D+A  +     +     +  +Y  LI G+ K G  + A ++W+ M      P+++ 
Sbjct: 470 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIIT 529

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  M+  LC +    Q+   + ++      P+  T+NT I G C  G+V+ A +  ++M 
Sbjct: 530 YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P++ T N LL GL     + +A +L       G  ++ VTYNTI+ G+C+     
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFE 649

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW---------- 512
           EAF LL +M  +    D  T+N I+ A    G++  A + + RI   G+           
Sbjct: 650 EAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKR 709

Query: 513 ------------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
                       +P+ ++++  +  +C  G  ++A   +Q+   +GI  + +T+  L+  
Sbjct: 710 KIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEG 769

Query: 561 L 561
           L
Sbjct: 770 L 770



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 258/523 (49%), Gaps = 28/523 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K +++  + LL  MK  G+  +   F  +++ Y ++G  ++A ++   + +  
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN ++  L  + +      +   M+   + P+V TYN L+      +     +
Sbjct: 313 VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGF 372

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGL 175
           +L+ +M  KG  P+AV+Y  +V    K G+++ A  EL     SG S     +N LING 
Sbjct: 373 ELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGY 432

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++ EAF ++ EM  +G+  N +T +TI+ +LC    ++ +  +L     RG   + 
Sbjct: 433 CKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDE 492

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ GY   G++ EA  LW+ M  +  +P+++ Y+T+I GLC +G  D+++    +
Sbjct: 493 VSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E+   P+ TTY+ +I G+ + G +  A Q  N+M+     P++     +++ LC   M
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM 612

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L      +    + VT+NT I GLC   R + A  LL +M++ +  P+  TYN 
Sbjct: 613 LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCG------IQL-----------------NIVTYNTIL 452
           +L  L    R+KEA E ++ I + G      I L                 N VT++  +
Sbjct: 673 ILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQI 732

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + +C  G   +A  ++ +   +G  L   T+  ++    K+ K
Sbjct: 733 NELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 5/208 (2%)

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF---EL 432
           V  +T I     C R   A ++ ++MK+    PN+ T N L++ L+R       +    +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
            +++ K G+++N  T+N +++G C    + EA  L+GKM       D +++N I+   CK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           +GK+N A  LL  ++  G   P+  ++  L+ G C  G ++EA   +  M    + P+  
Sbjct: 260 KGKLNEARDLLLDMKNNGLL-PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318

Query: 553 TWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           T+N+L+  L  + G +   + L D M N
Sbjct: 319 TYNMLIGGLCKD-GKIDEAFRLKDEMEN 345



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 4/227 (1%)

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC---GCGRVDWAMKLLDQMKQYECLPNI 410
           N  H A  +  +M   +  PN +T NT I  L        V  +  +   + +     N 
Sbjct: 153 NRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNT 212

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            T+N L+ G    N++ EA  L+ +++      + V+YNTIL  +C+ G + EA  LL  
Sbjct: 213 NTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLD 272

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G   +  TFNI++  YCK G +  A Q++D +       PD+ +Y  L+ G+C  G
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVID-LMAQNNVLPDVWTYNMLIGGLCKDG 331

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
            + EAF    +M N  + P+  T+N L+   F     L    ++D +
Sbjct: 332 KIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 227/451 (50%), Gaps = 4/451 (0%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +PN  +Y  L+KALC+  ++D A   + EM  +   PD  +Y  ++ ++CK  ++  A E
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66

Query: 157 LAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                    V  YN L+ GLCK  ++ +A  L   M   GI P+ +TY+T+I   C +  
Sbjct: 67  FFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQ 126

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
            ET+ G+L  M  R C+P ++S+ S++ G     +  +A  L+  M   G  P+ V Y+T
Sbjct: 127 FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNT 186

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LIHGLC    + EA  +   M ENS  P+  T++ALI+G      +  A  ++  M   G
Sbjct: 187 LIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 246

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C+P++V +T +V  LC       A S++    +  CP   + +    + L      D A 
Sbjct: 247 CAPDLVTHTVLVSKLCIRRKLRPALSVVRN--YPACPEAVILYTPIFRELGRRRGFDRAA 304

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +LL +M +    PN+ TY     GL        A+     + + GI+ ++V YN ++ G 
Sbjct: 305 RLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 364

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+A  +  A +++  M   G   + +T+N ++  +C++GKV    +LL  +   G   PD
Sbjct: 365 CKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGR-QPD 423

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           + ++++L+ G+   G +  A+ +L   +++G
Sbjct: 424 VATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 224/453 (49%), Gaps = 21/453 (4%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP    Y +++ AL    +        + M R+ + P+VFTYN+++  LCK  R+  A +
Sbjct: 7   KPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIE 66

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLC 176
               M      PD V+Y T++  +CK G+V +A  L     G+G++     Y  LI+  C
Sbjct: 67  FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 122

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  + E A+ LL  M  R   P V +Y +II+ LC    V+ +  +  +M + GC P+  
Sbjct: 123 KMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRV 182

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++ +L+ G  +  R HEA DL   M+   F P+ + ++ LI GLC+   + EA  +   M
Sbjct: 183 TYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGM 242

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +  C P++ T++ L+        L  A  +        C   V+ YT + + L +   F
Sbjct: 243 AKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGF 300

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW-----AMKLLDQMKQYECLPNIT 411
            +A  L++KMA     PN VT+  F KGL      DW     A +   +M +    P++ 
Sbjct: 301 DRAARLLQKMARRGVAPNVVTYTAFFKGL-----GDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            YN L+DG  + NR+  A ++V  +++ G+  NIVTYNT++   CR G V    +LL  M
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTM 415

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +  G + D  T++ ++    + G+V+ A   L+
Sbjct: 416 VSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLN 448



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 223/451 (49%), Gaps = 15/451 (3%)

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGLCKEHKIE 182
           ++ C P+A+SY  +V ++C+ G++++A     E+A  +    V  YN +I+ LCK  +I 
Sbjct: 3   SQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRIS 62

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A     E  +   +P+V+TY+T++  LC  G V  +  + G M   G  P+  ++T+L+
Sbjct: 63  RAI----EFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLI 118

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             +    +   A  L   M      P V +Y ++I+GLC N  +D+A  +  +M+   C 
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  TY+ LI G      L  A  +   M+ N   P+ + +T +++ LC  +   +A  L
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVL 238

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN-ITTYNELLDGLL 421
            + MA + C P+ VT    +  LC   ++  A+ ++   + Y   P  +  Y  +   L 
Sbjct: 239 FQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVV---RNYPACPEAVILYTPIFRELG 295

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R      A  L+ ++ + G+  N+VTY     G+      + A++   +ML +G + D +
Sbjct: 296 RRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMV 355

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            +N+++  +CK  +++ A +++  +   G   P+I++Y +L+   C  G ++     L  
Sbjct: 356 AYNVLVDGFCKANRLDMAEKMVRYMDQSG-LPPNIVTYNTLVGHHCRKGKVEAIGELLHT 414

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
           M++ G  P+ ATW+ LV  LF  +G +   Y
Sbjct: 415 MVSRGRQPDVATWSTLVAGLF-RVGQVDAAY 444



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 203/438 (46%), Gaps = 11/438 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L    +ID     + +M  E +      +  VI++  +     +A++ F  + E  
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 73

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +L  L    R +    ++ +M+  G+ P+  TY  L+   CK  + + AY
Sbjct: 74  --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGL 175
            LL  M ++ C+P   SY +I++ +CK  +V++A +L   M+          YN LI+GL
Sbjct: 132 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 191

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C + ++ EA  LL  MV+    P+ IT++ +I  LC    ++ +  +   M  +GC P++
Sbjct: 192 CVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 251

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + T L+    +  +   A  +            V+ Y+ +   L      D A  +  +
Sbjct: 252 VTHTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAARLLQK 309

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PNV TY+A   G       + A + + RM+  G  P++VAY  +V   C+ N 
Sbjct: 310 MARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANR 369

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  ++  M     PPN VT+NT +   C  G+V+   +LL  M      P++ T++ 
Sbjct: 370 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWST 429

Query: 416 LLDGLLRVNRVKEAFELV 433
           L+ GL RV +V  A+  +
Sbjct: 430 LVAGLFRVGQVDAAYSFL 447



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 7/336 (2%)

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           +F + C PN  S+  L+K     G+  +A      M RE  +P+V  Y+ +I  LC    
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +  A+     M E    P+V TY+ L+ G  K G +  A  ++  M   G +P+ V YT 
Sbjct: 61  ISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++ V C+   F  A+ L++ MA   C P   ++ + I GLC   +VD A +L ++MK   
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C P+  TYN L+ GL    R+ EA +L+T + +   Q + +T+  ++ G+C    + EAF
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            L   M  +G   D +T  +++   C + K+  A+ +   +R        +I YT +   
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSV---VRNYPACPEAVILYTPIFRE 293

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +    G   A   LQKM   G+ PN  T+    + L
Sbjct: 294 LGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGL 329



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 167/363 (46%), Gaps = 11/363 (3%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   QA  +F  +   G+ P+   Y  ++D      +F     +   M      P V++Y
Sbjct: 90  GRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSY 149

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---- 159
             ++  LCKN +VD AY+L  EM   GC PD V+Y T++  +C   ++ EA++L      
Sbjct: 150 CSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVE 209

Query: 160 -RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
             F      + ALI GLC   +I+EAF L   M  +G  P+++T++ ++S LC    +  
Sbjct: 210 NSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRP 269

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT--HEASDLWNRMIREGFLPNVVAYSTL 276
           +L ++       C   +  +T + +   LG R     A+ L  +M R G  PNVV Y+  
Sbjct: 270 ALSVVRNY--PACPEAVILYTPIFRE--LGRRRGFDRAARLLQKMARRGVAPNVVTYTAF 325

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
             GL        A     +M E    P++  Y+ L+DGF KA  L  A ++   M  +G 
Sbjct: 326 FKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGL 385

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN+V Y  +V   C+         L+  M      P+  T++T + GL   G+VD A  
Sbjct: 386 PPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYS 445

Query: 397 LLD 399
            L+
Sbjct: 446 FLN 448



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 156/338 (46%), Gaps = 3/338 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   + C+ +    LLQ M     S +   + S+IN   +    +QA ++F  ++  G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP    YN ++  L  + R      + + M  +  +P+  T+  L++ LC  +R+  A+
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS---GVSVYNALINGLCK 177
            L   M  +GCAPD V++T +VS +C   ++  A  +   + +    V +Y  +   L +
Sbjct: 237 VLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGR 296

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
               + A  LL +M  RG+ PNV+TY+     L D      +     +M  +G  P++ +
Sbjct: 297 RRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVA 356

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +  L+ G+    R   A  +   M + G  PN+V Y+TL+   C  G ++    + + M 
Sbjct: 357 YNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 416

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
                P+V T+S L+ G  + G +  A    N  +S G
Sbjct: 417 SRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 270/561 (48%), Gaps = 12/561 (2%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK-PTVKIYNHIL 72
           +++ L++MK +    +      V+ +Y  VGL ++AL++++ + +     P+    N +L
Sbjct: 117 IEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLL 176

Query: 73  DALLAENRFSMINPIYSNM-KRDGMEP---NVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + L+   R    + +Y  M  RD  +    + +T +I++K LC   R++   KL+     
Sbjct: 177 NLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWG 236

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEE 183
           KGC P+ V Y T++   CK G+VE A    ++L M+ F   +  + +L+NG CK    E 
Sbjct: 237 KGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEA 296

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              LL EM DRG+  NV  Y+ II +   +G    +   L +M    C P++ ++ +L+ 
Sbjct: 297 IDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLIN 356

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            +   G   EA  L  + IR G  PN + Y+ L+HG C  G   +A     +M  +    
Sbjct: 357 HFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEV 416

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ +Y ALI G   AG +  A  I +RM++ G  P+   Y  ++  L +      A  ++
Sbjct: 417 DMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVML 476

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M  +N  P+   + T + G    G +D A KL   + +    P +  YN ++ G  + 
Sbjct: 477 TEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKS 536

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             +  A   + ++ +     +I T++TI+ G  +   +    ++ G M+ +  K + +T+
Sbjct: 537 GMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTY 596

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
             +I  YC++G+   A +L   +R  G   P +++Y+ L+   C    + +A  Y + ML
Sbjct: 597 TSLINGYCRKGETKMAEKLFSMMRSHG-LKPSVVTYSILIGSFCKEAKLGKAVSYFELML 655

Query: 544 NEGICPNFATWNVLVRSLFSN 564
                PN A ++ LV   F+N
Sbjct: 656 INKCTPNDAAFHYLVNG-FTN 675



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 264/569 (46%), Gaps = 20/569 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +K E++    L +++K++G   +   F S++N + ++G+ E    +   +++ G
Sbjct: 249 LIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG 308

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L   V++YN+I+DA                M  +  EP++ TYN L+   C    V+ A 
Sbjct: 309 LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAE 368

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVSV----YNALINGL 175
           KLL +   +G AP+ ++YT +V   CK G+  +A +  +    SG+ V    Y ALI+GL
Sbjct: 369 KLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGL 428

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               +++ A  +   M++RGI P+   Y+ +++ L   G +  +  +L +M  +   P+ 
Sbjct: 429 VVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDA 488

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + +L+ G++  G   EA  L+  +I +G  P VV Y+ +I G   +G MD A+    +
Sbjct: 489 FVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDK 548

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P++ T+S +IDG+ K  N+    +I+  M+   C PNVV YT ++   C+   
Sbjct: 549 MRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGE 608

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L   M      P+ VT++  I   C   ++  A+   + M   +C PN   ++ 
Sbjct: 609 TKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHY 668

Query: 416 LLDGLLRVNRV-------------KEAFE-LVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           L++G                    +  FE   + +   G       YN IL  +C+  MV
Sbjct: 669 LVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMV 728

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A QL  KML  G   DA++F  +I+  C +G       ++      GE     + Y+ 
Sbjct: 729 KTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQI-ALKYSL 787

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            L      GG+ EA   LQ M+   + PN
Sbjct: 788 ELDKFIPEGGISEASGILQAMIKGYVSPN 816


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 284/587 (48%), Gaps = 48/587 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  M+ +G+      +   I+S  R   + Q   +  ++R   + P    YN +++  +
Sbjct: 232 LIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFV 291

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +  +   +++ M    + PN+ TYNIL+   C N   + A ++L  M      P+ V
Sbjct: 292 KEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEV 351

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEM 191
           +  T+++ + K  + + AR +  R+    +  N      +I+GLC+   ++EAF LL EM
Sbjct: 352 TIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEM 411

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ P++IT+S +I+  C VGN+  +  ++ +++  G  PN   F++L+      G  
Sbjct: 412 CKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNV 471

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           +EA   +  M   G   +    ++L+  LC NG + EA    + +      PN  T+  +
Sbjct: 472 YEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCI 531

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G+A  G+  GA  +++RMIS G  P+   Y  ++KVLC+   F +A  L++K+   +C
Sbjct: 532 INGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL---HC 588

Query: 372 PP---NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV-- 426
            P   +T+++NT I  +   G +  A++L ++M Q   LP+  TY  +L GL+R  R+  
Sbjct: 589 IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVC 648

Query: 427 ----------------------------------KEAFELVTEIEKCGIQLNIVTYNTIL 452
                                             K A  L  E+E+ G+ L+++  N+I 
Sbjct: 649 AFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSIT 708

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G  R G V  A  L+ K   +    +  TFNI+++ Y +   + +  +L + +R  G +
Sbjct: 709 DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            P+ ++Y SL+ G+CN G ++     L+  + E    +  T+N+L+R
Sbjct: 769 -PNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIR 814



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 267/592 (45%), Gaps = 42/592 (7%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S +  VF  +I  Y R G+   A+  F  +   G KP+V   N I+ +++   R  ++  
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWS 161

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            +  M    + PNV ++NIL+  LC   ++  A  +L  M   G  P  VSY T++S  C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 147 KLGQVEEARELAM-------------------------RFGSGVSV-------------- 167
           K G+ + A  L                           R   G  V              
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 168 -YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN LING  KE KI  A  +  EM++  + PN+ITY+ +I+  C  GN E +L +L  M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 PN  +  +LL G     +   A ++  R        N ++++ +I GLC NG +
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLL 401

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           DEA  +  +M ++   P++ T+S LI+GF K GN+  A ++ +++   G  PN V ++ +
Sbjct: 402 DEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C+    ++A      M       +  T N+ +  LC  G++  A + L  + +   
Sbjct: 462 IYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGL 521

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +PN  T++ +++G   V     AF +   +  CG   +  TY ++L  +C+     EA +
Sbjct: 522 VPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARK 581

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL K+      +D I++N +I    K G +  A++L + +       PD  +YT +L G+
Sbjct: 582 LLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNIL-PDSYTYTCILSGL 640

Query: 527 CNSGGMQEAFIYLQKMLNEGICP-NFATWNVLVRSLFSNLGHLGPVYILDDI 577
              G +  AFI+L +++ + I   N   +   +  LF        +Y+  ++
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/533 (24%), Positives = 241/533 (45%), Gaps = 62/533 (11%)

Query: 80  RFSMINPIYSNM---------KRDGMEPNVFTY--NILLKALCKNNRVDGAYKLLVEMGN 128
           +F+ + PI+  +         K+ G+EPN  T+   I    L K      A  +L  +  
Sbjct: 23  KFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQ 82

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           K    + +            G + +   L     S  +V++ LI    ++  +  A    
Sbjct: 83  KNSGSNFL-----------FGVLMDTYPLC---SSNPAVFDLLIRVYLRQGMVGHAVNTF 128

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M+ RG  P+V T + I++S+              QM      PN+ SF  L+    + 
Sbjct: 129 SSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQ 188

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME----------- 297
           G+  +A ++   M R G++P +V+Y+TL+   C  G    A+ + + ME           
Sbjct: 189 GKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTY 248

Query: 298 --------ENS----------------CPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
                    NS                  PN  +Y+ LI+GF K G +  A++++N MI 
Sbjct: 249 NMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIE 308

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
              SPN++ Y  ++   C N  F +A  +++ M   +  PN VT  T + GL    + D 
Sbjct: 309 LNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDV 368

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A  +L++        N  ++  ++DGL R   + EAF+L+ E+ K G+  +I+T++ +++
Sbjct: 369 ARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLIN 428

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C+ G + +A +++ K+  EG   + + F+ +IY  CK G V  A++    +   G+ N
Sbjct: 429 GFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQ-N 487

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
            D  +  SL+  +C +G + EA  +L  +   G+ PN  T++ ++   ++N+G
Sbjct: 488 ADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIING-YANVG 539



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/542 (22%), Positives = 243/542 (44%), Gaps = 39/542 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R GL ++A ++   + + G+ P +  ++ +++        +    + S + R+G  PN  
Sbjct: 397 RNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNV 456

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
            ++ L+   CK   V  A K    M   G   D  +  ++V+S+C+ G++ EA E     
Sbjct: 457 IFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL--- 513

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                            H I             G+ PN +T+  II+   +VG+   +  
Sbjct: 514 -----------------HHISRI----------GLVPNSVTFDCIINGYANVGDGSGAFS 546

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M   G +P+  ++ SLLK    G    EA  L  ++       + ++Y+TLI  + 
Sbjct: 547 VFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEIS 606

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC-SPNV 340
            +G++ EAV +  +M +N+  P+  TY+ ++ G  + G L+ A     R++     + N 
Sbjct: 607 KSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNS 666

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           + YTC +  L +      A  L ++M  +    + +  N+   G    G+V  A  L+ +
Sbjct: 667 IVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISK 726

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
            +    +PN+TT+N LL G  R   +   F+L   + + G   N +TY++++ G+C  GM
Sbjct: 727 TRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGM 786

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL---LDRIRGGGEWNPDII 517
           +    ++L   + E + +D +TFN++I   C+   ++  I L   ++  R   + +    
Sbjct: 787 LELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKA 846

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
               L+  + +    Q  F+++ +ML +G  P    +  +++ +   +G +   + L D 
Sbjct: 847 VTDVLVRRMVS----QNYFVFMHEMLKKGFIPTSKQYCTMMKRM-CRVGDIQGAFKLKDQ 901

Query: 578 MA 579
           M 
Sbjct: 902 MV 903



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 127/595 (21%), Positives = 256/595 (43%), Gaps = 48/595 (8%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            I+  + ++ ++  EG   +  +F ++I +  +VG   +A+K +  +   G        N 
Sbjct: 436  INKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNS 495

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            ++ +L    +         ++ R G+ PN  T++ ++          GA+ +   M + G
Sbjct: 496  LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCG 555

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
              P   +Y +++  +CK     EAR+L  +            YN LI  + K   + EA 
Sbjct: 556  HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKG 244
             L  EM+   I P+  TY+ I+S L   G +  +   LG++  +     N   +T  + G
Sbjct: 616  RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                G++  A  L+  M  +G   +++A +++  G    G +  A S+  +    +  PN
Sbjct: 676  LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            +TT++ L+ G+++  +++   +++N M  +G  PN + Y  ++  LC + M      +++
Sbjct: 736  LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
                E+   + +TFN  I+  C    +D  + L   M+ +    +  T   + D L+R  
Sbjct: 796  MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD----- 479
              +  F  + E+ K G       Y T++  +CR G +  AF+L  +M+  G  LD     
Sbjct: 856  VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAEC 915

Query: 480  ------------------------------AITFNIIIYAYCKQG---KVNNAIQLLDRI 506
                                            TF  +++ +CK+    + +N   L++  
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 507  RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            R       DI++Y  L+   C +G +  A  + +++  +G+ PN  T+ VLV ++
Sbjct: 976  R----VKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/563 (23%), Positives = 241/563 (42%), Gaps = 19/563 (3%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  L E  ++   +  L  +   G+  +   F  +IN Y  VG    A  +F R+   G
Sbjct: 496  LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCG 555

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P+   Y  +L  L     F     +   +    +  +  +YN L+  + K+  +  A 
Sbjct: 556  HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALING 174
            +L  EM      PD+ +YT I+S + + G++  A     R            VY   I+G
Sbjct: 616  RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            L K  + + A +L  EM ++G+  ++I  ++I      +G V ++  ++ +   +   PN
Sbjct: 676  LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            + +F  LL GY  G        L+N M R GF PN + Y +LI GLC++G ++  + +  
Sbjct: 736  LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM----ISNGCSPNVVAYTCMVKVL 350
                 S   +  T++ LI    +  +L     + + M    +S            +V+ +
Sbjct: 796  MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 351  CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
               N F   H +++K       P +  + T +K +C  G +  A KL DQM       + 
Sbjct: 856  VSQNYFVFMHEMLKK----GFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDD 911

Query: 411  TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
                 ++ GL    +++EA  ++  + +        T+ T++H  C+     EA  L  K
Sbjct: 912  AAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL--K 969

Query: 471  MLIEG--TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            +L+E    KLD + +N++I A C  G V  A+   + I+  G   P++ +Y  L+  I  
Sbjct: 970  ILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLL-PNMTTYRVLVSAIST 1028

Query: 529  SGGMQEAFIYLQKMLNEGICPNF 551
               +    I L+ + + G+   +
Sbjct: 1029 KHYVSRGEIVLKDLNDRGLVSGY 1051


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 236/458 (51%), Gaps = 10/458 (2%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNIL 106
           +A+ +FY+I+    +PT + YN ++  L+ E ++  ++ +Y+ M  +G  +P+  TY+ L
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSAL 236

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF--- 161
           + A CK  R D A +LL EM   G  P A  YT I+S   KL  V  A  L   MR+   
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC 296

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LI GL K  +I+EA+    EM   G  P+ +  + +I+ L   G ++  L 
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLK 356

Query: 222 ILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
           +  +M V  C PN+ ++ +++K  +    R  E    + RM   G  P+   YS LI G 
Sbjct: 357 LFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGF 416

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    +++A+ +  +M+E   PP    Y +LID   KA     A +++  +  N  S + 
Sbjct: 417 CKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSA 476

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  M+K L +      A +L ++M+   C PN   +N  + GL     +D A+  + +
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRK 536

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M+++ CLP+I +YN +L+GL +      A E++T ++   I+ + V+YNT+L  +  AGM
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             EA +L+ +M   G + D IT++ I+ A    GKV+ 
Sbjct: 597 FEEAAELMKEMNALGFEYDLITYSSILEAI---GKVDQ 631



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 225/463 (48%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +++ L     +  A  +  ++  + C P A +Y +++  +   GQ E+  EL     +  
Sbjct: 165 VIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG 224

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+  CK  + + A  LL EM + G+ P    Y+ IIS    + NV  +
Sbjct: 225 HCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L +  +M    C P++ ++T L++G    GR  EA   ++ M REG  P+ V  + +I+ 
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINF 344

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +D+ + +  +M  + C PNV TY+ +I    ++ + +     W  RM  +G SP
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R D A +L 
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++  L +  R+ +A  L  E+ K G   N+  YN ++ G+ RA
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARA 524

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            M+ EA   + KM   G   D  ++NII+    K G  + A+++L  ++      PD +S
Sbjct: 525 CMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST-IKPDAVS 583

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  + ++G  +EA   +++M   G   +  T++ ++ ++
Sbjct: 584 YNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAI 626



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 211/432 (48%), Gaps = 7/432 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L  + + + V  L  +M  EG    + V + ++I+++ ++G  + A+++   ++E 
Sbjct: 200 MIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKEN 259

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++PT KIY  I+      +       ++  M+     P+VFTY  L++ L K  R+D A
Sbjct: 260 GMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEA 319

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALING 174
           Y    EM  +GC PD V    +++ + K G++++  +L    G       V  YN +I  
Sbjct: 320 YHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKA 379

Query: 175 LCK-EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           L + + ++ E F     M   GI P+  TYS +I   C    +E ++ +L +M  +G  P
Sbjct: 380 LFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPP 439

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL+       R   A +L+  +       +   Y+ +I  L   G +D+A+++ 
Sbjct: 440 CPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLF 499

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +  C PNV  Y+AL+ G A+A  L  A     +M  +GC P++ +Y  ++  L + 
Sbjct: 500 DEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKT 559

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H+A  ++  M      P+ V++NT +  L   G  + A +L+ +M       ++ TY
Sbjct: 560 GGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITY 619

Query: 414 NELLDGLLRVNR 425
           + +L+ + +V++
Sbjct: 620 SSILEAIGKVDQ 631



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 193/408 (47%), Gaps = 9/408 (2%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGIL 223
              YN++I  L  E + E+   L  EM + G   P+ +TYS +IS+ C +G  ++++ +L
Sbjct: 194 AQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLL 253

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P    +T ++  +      H A  L+  M      P+V  Y+ LI GL   
Sbjct: 254 NEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKA 313

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G +DEA    ++M+   C P+    + +I+   KAG L    +++  M  + C PNVV Y
Sbjct: 314 GRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTY 373

Query: 344 TCMVKVLCQN-NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
             ++K L ++ +   +  S  E+M      P+  T++  I G C   R++ AM LL++M 
Sbjct: 374 NTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMD 433

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMV 461
           +    P    Y  L+D L +  R   A EL  E+ E CG     V Y  ++  + +AG +
Sbjct: 434 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV-YAVMIKHLGKAGRL 492

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  L  +M   G   +   +N ++    +   ++ A+  + +++  G   PDI SY  
Sbjct: 493 DDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCL-PDINSYNI 551

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           +L G+  +GG   A   L  M N  I P+  ++N    ++ S L H G
Sbjct: 552 ILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYN----TVLSALSHAG 595



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 9/207 (4%)

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C    +  +  I+ L     +  A+ +  Q+K  +C P    YN ++  L+   + ++  
Sbjct: 155 CVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVH 214

Query: 431 ELVTEIEKCG-IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           EL  E+   G  Q + VTY+ ++   C+ G    A +LL +M   G +  A  + +II  
Sbjct: 215 ELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISL 274

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           + K   V+ A+ L + +R      PD+ +YT L+ G+  +G + EA+ +  +M  EG  P
Sbjct: 275 FFKLDNVHGALSLFEEMRYM-YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKP 333

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDD 576
           +     V++ ++ + LG  G    LDD
Sbjct: 334 D----TVVMNNMINFLGKAGR---LDD 353



 Score = 45.4 bits (106), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 32/161 (19%), Positives = 74/161 (45%), Gaps = 2/161 (1%)

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQL 467
           + +TY  L+  L  V +  E ++++ E+ +  I  +  +  + ++  +  A M+ +A  +
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITI 181

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             ++     +  A  +N +I     +G+     +L + +   G   PD ++Y++L+   C
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFC 241

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
             G    A   L +M   G+ P    + +++ SLF  L ++
Sbjct: 242 KLGRQDSAIRLLNEMKENGMQPTAKIYTMII-SLFFKLDNV 281


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 269/528 (50%), Gaps = 44/528 (8%)

Query: 51  KMFYRIREFGLKPTVKIYNHILDALLAENRFSMI---NPIYSNMKRDGMEPNVFTYNILL 107
           ++F +++    +P +   N +L+AL+  N    +     ++ +  + G++PNV T+NIL+
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV- 165
              C +N  + A +L+ +MG  GC PD V+Y T+++++CK  Q+ + R+L ++   SG+ 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 166 ---SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
              + YN L++G CK   ++EA  ++  M  +G+ P+V TY+T++  LCD G ++ ++ +
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M      P++ ++ +L+ G      +  A  L   M   G   N V ++ +I   C+
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +DEA +V  +M E+   P+  TY+ +I+G+ KAG +  A ++ + M   G   +   
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 343 YTCMVKVLCQNNMFHQAHSLI-----------------------------------EKMA 367
              ++  +C       A++L                                    E+M 
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                   +T+NT I+GLC  G+ D A+  L+++ +   +P+ +T N ++ G      V+
Sbjct: 519 ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVE 578

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +AF+   ++ +  ++ +I T N +L G+CR GM+ +   L    + +G  +D +T+NIII
Sbjct: 579 KAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIII 638

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            ++CK+ ++ +A  L+  + G     PD  +Y +++ G+  +G  +EA
Sbjct: 639 SSFCKERRLEDAFDLMTEMEGKN-LEPDRYTYNAIVTGLTKAGRTEEA 685



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 267/554 (48%), Gaps = 17/554 (3%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV  +   F  +I+ Y      E+AL++  ++ E+G  P    YN +L AL   ++ + +
Sbjct: 206 GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQV 265

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +   MK  G+ PN  TYNIL+   CK   +  A +++  M  KG  PD  +Y T+V  
Sbjct: 266 RDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRG 325

Query: 145 ICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHK-IEEAFWLLCEMVDRGIDP 198
           +C  G+++EA  L  +  S      V  YN LI+G C EH+  + AF L+ EM  RG+  
Sbjct: 326 LCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKE 384

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N +T++ +I   C  G ++ +  ++ +M   G +P+  ++ +++ GY   G+  EA  + 
Sbjct: 385 NGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMM 444

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           + M R+G   +    +TL+H +C    +D+A +++ +  +     +  TY  LI G+ K 
Sbjct: 445 DEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKD 504

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                A ++W  M   G    ++ Y  +++ LC +    QA   + ++  +   P+  T 
Sbjct: 505 EQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTS 564

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G C  G V+ A +  ++M ++   P+I T N LL GL R   +++   L      
Sbjct: 565 NIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWIS 624

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G  ++ VTYN I+   C+   + +AF L+ +M  +  + D  T+N I+    K G+   
Sbjct: 625 KGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEE 684

Query: 499 AIQLLDRIRGGGEW------NPDI----ISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A +L  +    G+       +P++    + Y+  +  +C  G  ++A    Q+   +G+ 
Sbjct: 685 AEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVS 744

Query: 549 PNFATWNVLVRSLF 562
            N  T+  L+  L 
Sbjct: 745 LNKYTYIKLMDGLL 758



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 251/519 (48%), Gaps = 46/519 (8%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKAL------------------------------------ 110
           I++ MKR    PN+ T N LL AL                                    
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIH 219

Query: 111 --CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV-- 165
             C +N  + A +L+ +MG  GC PD V+Y T+++++CK  Q+ + R+L ++   SG+  
Sbjct: 220 GYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFP 279

Query: 166 --SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
             + YN L++G CK   ++EA  ++  M  +G+ P+V TY+T++  LCD G ++ ++ + 
Sbjct: 280 NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLR 339

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M      P++ ++ +L+ G      +  A  L   M   G   N V ++ +I   C+ 
Sbjct: 340 DKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G +DEA +V  +M E+   P+  TY+ +I+G+ KAG +  A ++ + M   G   +    
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             ++  +C       A++L  K        + VT+ T I G     + D A+KL ++MK+
Sbjct: 460 NTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKE 519

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
              +  I TYN ++ GL    +  +A + + E+ + G+  +  T N I+HG C  G V +
Sbjct: 520 TGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEK 579

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP-DIISYTSL 522
           AFQ   KM+    K D  T NI++   C++G +   + L +     G+  P D ++Y  +
Sbjct: 580 AFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGK--PMDTVTYNII 637

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   C    +++AF  + +M  + + P+  T+N +V  L
Sbjct: 638 ISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/547 (23%), Positives = 257/547 (46%), Gaps = 36/547 (6%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L ++ ++  V+ LL QMK  G+  +   +  +++ Y ++   ++A ++   +   G+ P 
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPD 315

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN ++  L  E +      +   M+   + P+V TYN L+    ++   D A+KL+ 
Sbjct: 316 VWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVE 375

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEH 179
           EM  +G   + V++  ++   C  G+++EA  + ++     F      YN +ING CK  
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K+ EA+ ++ EM  +G+  +  T +T++ ++C    ++ +  +  +   RG   +  ++ 
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYG 495

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+ GY    +   A  LW  M   G +  ++ Y+T+I GLC +G  D+AV    ++ E 
Sbjct: 496 TLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK 555

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              P+ +T + +I G+   G +  A Q  N+M+ +   P++     +++ LC+  M  + 
Sbjct: 556 GLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKG 615

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            +L      +  P +TVT+N  I   C   R++ A  L+ +M+     P+  TYN ++ G
Sbjct: 616 LTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNI-----------VTYNTILHGVCRAGMVVEAFQLL 468
           L +  R +EA +L  +  + G Q+             + Y+  +  +C  G   +A +L 
Sbjct: 676 LTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLF 735

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGK-----------VNNAIQLLDRIRGGGEWNPDII 517
            +   +G  L+  T+  ++    K+ K           V+  IQ  DR       NP  +
Sbjct: 736 QQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQFFDR-------NP--M 786

Query: 518 SYTSLLW 524
            Y  +LW
Sbjct: 787 RYAHILW 793



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 39/361 (10%)

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVV------------------------------ 271
           L  Y++  + H    ++N+M R  F PN++                              
Sbjct: 145 LAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVK 204

Query: 272 --------AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
                    ++ LIHG CS+ + +EA+ +  QM E  C P+  TY+ ++    K   L  
Sbjct: 205 LGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQ 264

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
              +  +M ++G  PN   Y  +V   C+     +A  +IE M  +   P+  T+NT ++
Sbjct: 265 VRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVR 324

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G++D A++L D+M+ ++ +P++ TYN L+DG         AF+LV E++  G++ 
Sbjct: 325 GLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKE 384

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           N VT+N ++   C  G + EA  ++ KM+  G   D  T+N +I  YCK GK+  A +++
Sbjct: 385 NGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMM 444

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           D + G      D  +  +LL  +C    + +A+    K    G   +  T+  L+   F 
Sbjct: 445 DEM-GRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFK 503

Query: 564 N 564
           +
Sbjct: 504 D 504


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 267/525 (50%), Gaps = 42/525 (8%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR-FSMINPIYSNMKRDGMEPNVFT 102
           G   +A K+F+++  +G+  +V   N  L  L        +   ++      G+  N  +
Sbjct: 185 GFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVS 244

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF- 161
            NI+L  LC+  +V  A+ LLV+M ++G  PD VSY  +VS  C++G++++  +L     
Sbjct: 245 CNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELK 304

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           G G+     +YN +I  LCK  ++ EA  LL  M   G+ P+ + Y+T+IS  C +    
Sbjct: 305 GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL---- 360

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
                                          G    A  L++ M R+  +P++V Y+++I
Sbjct: 361 -------------------------------GNVSAACKLFDEMRRKKIVPDIVTYTSVI 389

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           HG+C +G M EA  +  +M      P+  TY+ALIDG+ KAG +  A  + N+M+  G +
Sbjct: 390 HGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLT 449

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PNVV YT +   LC+N     A+ L+ +M+ +   PN  T+NT + GLC  G ++  +KL
Sbjct: 450 PNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKL 509

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           +++M      P+  TY  L+D   ++  + +A EL+  +    +Q  +VT+N +++G C 
Sbjct: 510 MEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCM 569

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           +GM+ +  +L+  ML +G   +A TFN ++  YC +  +    ++   +   G   PD  
Sbjct: 570 SGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVM-PDSN 628

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +Y  L+ G C +  M+EA+   ++M+ +G     AT++ L+R  +
Sbjct: 629 TYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 237/468 (50%), Gaps = 7/468 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+K+F    E G+       N +L  L    +    + +   M   G  P+V +Y +++ 
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR----FG 162
             C+   +D   KL+ E+  KG  PD   Y  I+  +CK G+V EA +L   MR    F 
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V VY  +I+G CK   +  A  L  EM  + I P+++TY+++I  +C  G +  +  +
Sbjct: 346 DNV-VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M V+G  P+  ++T+L+ GY   G   EA  + N+M+++G  PNVV Y+ L  GLC 
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           NG +D A  + ++M      PNV TY+ +++G  K GN+    ++   M   G  P+ + 
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT ++   C+     +AH L+  M  +   P  VTFN  + G C  G ++   +L++ M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +   +PN TT+N L+      N ++   E+   +   G+  +  TYN ++ G C+A  + 
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           EA+ L  +M+ +G  + A T++ +I  + K+ K   A +L + +R  G
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 225/453 (49%), Gaps = 22/453 (4%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +K  G++P+ + YN ++  LCKN  V  A +LL  M   G  PD V YTT++S  CKLG 
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           V  A +L       +    +  Y ++I+G+CK  K+ EA  +  EM+ +G++P+ +TY+ 
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTA 422

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C  G ++ +  +  QM  +G  PN+ ++T+L  G    G    A++L + M R+G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNV  Y+T+++GLC  G++++ V +  +M+     P+  TY+ L+D + K G +  A 
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   M++    P +V +  ++   C + M      LIE M  +   PN  TFN+ +K  
Sbjct: 543 ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQY 602

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C    +    ++   M     +P+  TYN L+ G  +   +KEA+ L  E+ + G  +  
Sbjct: 603 CIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTA 662

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TY+ ++ G  +    VEA +L  +M   G   +   ++I +    ++G     ++L D 
Sbjct: 663 ATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDE 722

Query: 506 -----------------IRGGGEWNPDIISYTS 521
                            I G  E N DII++ +
Sbjct: 723 FMTELSGTIFVVYICFFIGGSVESNFDIITFEA 755



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 214/414 (51%), Gaps = 5/414 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D V  L+ ++K +G+   E ++ ++I    + G   +A ++   +R++G+ P   +Y 
Sbjct: 292 ELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYT 351

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++         S    ++  M+R  + P++ TY  ++  +CK+ ++  A ++  EM  K
Sbjct: 352 TVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK 411

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           G  PD V+YT ++   CK G+++EA  +  +         V  Y AL +GLCK  +I+ A
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM  +G+ PNV TY+TI++ LC +GN+E ++ ++ +M + G  P+  ++T+L+  
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +A +L   M+ +   P +V ++ L++G C +G +++   +   M E    PN
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            TT+++L+  +    N+   ++I+  M   G  P+   Y  ++K  C+     +A  L +
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           +M  +       T++  I+G     +   A KL ++M+++  +     Y+  +D
Sbjct: 652 EMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 160/338 (47%), Gaps = 5/338 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+ + +      + SVI+   + G   +A +MF  +   GL+P    Y  ++D   
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +++ M + G+ PNV TY  L   LCKN  +D A +LL EM  KG  P+  
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y TIV+ +CK+G +E+  +L        F      Y  L++  CK  ++ +A  LL  M
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++ + P ++T++ +++  C  G +E    ++  M  +G  PN  +F SL+K Y +    
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
              ++++  M   G +P+   Y+ LI G C   +M EA  +  +M E        TY AL
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           I GF K    + A +++  M  +G       Y   V V
Sbjct: 669 IRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 158/335 (47%), Gaps = 5/335 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +M V+G+   E  + ++I+ Y + G  ++A  +  ++ + GL P V  Y  + D L 
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                 + N +   M R G++PNV+TYN ++  LCK   ++   KL+ EM   G  PD +
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523

Query: 137 SYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT++ + CK+G++ +A EL       R    +  +N L+NG C    +E+   L+  M
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +++GI PN  T+++++   C   N+  +  I   M  RG  P+ +++  L+KG+      
Sbjct: 584 LEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNM 643

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L   M+ +G+      Y  LI G        EA  +  +M ++        Y   
Sbjct: 644 KEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIF 703

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +D   + GN     ++ +  ++       V Y C 
Sbjct: 704 VDVNYEEGNWEITLELCDEFMTELSGTIFVVYICF 738



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 124/241 (51%), Gaps = 1/241 (0%)

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A +++      G   N V+   ++  LCQ     +AH+L+ +M      P+ V++   + 
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  G +D  +KL+D++K     P+   YN ++  L +   V EA +L+  + K G+  
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           + V Y T++ G C+ G V  A +L  +M  +    D +T+  +I+  CK GK+  A ++ 
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + +   G   PD ++YT+L+ G C +G M+EAF    +M+ +G+ PN  T+  L   L  
Sbjct: 406 NEMLVKG-LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 564 N 564
           N
Sbjct: 465 N 465


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/636 (25%), Positives = 288/636 (45%), Gaps = 101/636 (15%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S S   F  ++ ++   G  + AL +F  + + G + T++  N +L+ L+          
Sbjct: 91  SFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVA 150

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRV--------------------------DG-- 118
           ++  M+  G  P+ FT  I+ KA C++ RV                          DG  
Sbjct: 151 VFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYC 210

Query: 119 -------AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV---- 167
                  A KLL  +  KG +P+ V+YT +V   CK G++EEA ++         +    
Sbjct: 211 RIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDE 270

Query: 168 --YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y ALING C+  ++E+A  +  EM+D G+  N+  Y+T+I+  C +G +     +L  
Sbjct: 271 VAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQA 330

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
              RG N + +S+ +L+ GY   G   +A +  + M+R GF    + Y+TL++G CS G+
Sbjct: 331 NEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGA 390

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D+A+ + + M +    PN  + S L+DGF KAG    A  +W   ++ G + NVV    
Sbjct: 391 IDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINT 450

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+N    +A  L  +M   +CP +++T+ T I G C  G +  A ++  +M+   
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLG 510

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +P++  +N  + GL    +  +  ++  E+   G+  N VTY  ++ G C+ G + +A 
Sbjct: 511 FVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDAC 570

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA-------------------------- 499
            L  +M+ +G K +    ++++  + ++GKV+ A                          
Sbjct: 571 ILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKV 630

Query: 500 IQLLDRIRGGGE------WN----------------------------PDIISYTSLLWG 525
             +++ + GG        WN                            PD  +Y+SL+ G
Sbjct: 631 AHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHG 690

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              SG +  AF    +ML+  + PN  T+N L+  L
Sbjct: 691 CSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGL 726



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 291/625 (46%), Gaps = 68/625 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +L +  +I     + QQM+  G    +     +  +Y R G    A      + E G
Sbjct: 135 LLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMG 194

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L   +  Y+ ++D      +  +   +  +++  G+ PNV TY +L+K  CK  R++ A 
Sbjct: 195 LDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAE 254

Query: 121 KLLVEMG-NKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGVS--VYNALING 174
           K++ E+  N+    D V+Y  +++  C+ G++E+A   R+  +  G  V+  VYN +ING
Sbjct: 255 KVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMING 314

Query: 175 LCKEHKIEEAFWLL----------------------------------CEMVDR-GIDPN 199
            CK  ++ E   LL                                  C+M+ R G    
Sbjct: 315 YCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGT 374

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            +TY+T+++  C  G ++ +L +   M  RG  PN  S ++LL G+   G+T +A +LW 
Sbjct: 375 TLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWK 434

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             +  G   NVV  +T+I+GLC N  M EA  + ++M+E SCP +  TY  LIDG+ K G
Sbjct: 435 ETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLG 494

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L  A+QI   M + G  P+V  +   +  L       + + +  +M+ +   PNTVT+ 
Sbjct: 495 DLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYG 554

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE---- 435
             I G C  G +  A  L  +M +    PN+   + L+    R  +V EA  ++ +    
Sbjct: 555 ALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADT 614

Query: 436 --IEKCGIQ-LNI-------------------VTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             I+ C    LNI                   + +N ++ G+C+ G V +A  L   + +
Sbjct: 615 DMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKV 674

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G   D  T++ +I+     G ++ A  L D +       P+I++Y SL++G+C S  + 
Sbjct: 675 KGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEML-SARLTPNIVTYNSLIYGLCKSCNVS 733

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
            A     K+ ++GI PN  T+N L+
Sbjct: 734 RAVSLFNKLQSKGISPNAITYNTLI 758



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/604 (26%), Positives = 274/604 (45%), Gaps = 45/604 (7%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           ++  ++    +  +M   GV  +  V+ ++IN Y ++G   +  K+       G+     
Sbjct: 282 QRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEY 341

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN ++D    +   +        M R+G      TYN LL   C    +D A KL   M
Sbjct: 342 SYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLM 401

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKI 181
             +G  P+ +S +T++    K G+ E+A       LA      V   N +INGLCK  ++
Sbjct: 402 LKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRM 461

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA  L   M +     + +TY T+I   C +G++  +  I  +M   G  P++  F S 
Sbjct: 462 TEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSF 521

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G  +  ++ + +D+   M  +G  PN V Y  LI G C  G++ +A  + ++M E   
Sbjct: 522 ITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGL 581

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMIS----NGCSPNV----------------- 340
            PN+   S L+  F + G +  A+ +  ++        CS +                  
Sbjct: 582 KPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGN 641

Query: 341 -----VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
                + +  ++  LC+      A +L E +  +   P+  T+++ I G    G +D A 
Sbjct: 642 HQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAF 701

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L D+M      PNI TYN L+ GL +   V  A  L  +++  GI  N +TYNT++ G 
Sbjct: 702 GLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGH 761

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C+ G   EAF+L  KM+ EG +    T+ I+I+  C QG +  AI+LLD++      +P+
Sbjct: 762 CKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMI-ENNVDPN 820

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNE----GICPNFATWNV-----LVRSLFSNLG 566
            I+Y +L+ G    G M+     + K+ NE    G+ P   T +V     +V S   ++G
Sbjct: 821 FITYWTLIQGYARCGNMKA----ITKLYNEMHICGLLPANWTGHVKQAEPVVNSKNLSVG 876

Query: 567 HLGP 570
           H+ P
Sbjct: 877 HVEP 880



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 178/364 (48%), Gaps = 2/364 (0%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           ++  ++ +  D G ++ +L +  +M   G    + S   LL   +  G    A  ++ +M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              G LP+    + +    C +G +  A     +MEE     N+  Y A++DG+ + G  
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF-ENCPPNTVTFNT 380
             A ++ + +   G SPNVV YT +VK  C+     +A  +++++   E    + V +  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G C  GR++ A ++ D+M       N+  YN +++G  ++ R+ E  +L+   E  G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           + L+  +YNT++ G CR G + +AF+    M+  G     +T+N ++  +C +G +++A+
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L   +   G   P+ IS ++LL G   +G  ++A    ++ L  G+  N  T N ++  
Sbjct: 396 KLWFLMLKRGVV-PNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454

Query: 561 LFSN 564
           L  N
Sbjct: 455 LCKN 458



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 192/417 (46%), Gaps = 7/417 (1%)

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           E+   F    + ++ L+       ++++A ++  EM   G    + + + +++ L   G+
Sbjct: 85  EVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGD 144

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           + T++ +  QM   G  P+  +   + K Y   GR   A+D    M   G   N+VAY  
Sbjct: 145 IGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHA 204

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN- 334
           ++ G C  G  + A  + + ++     PNV TY+ L+ G+ K G +  A ++   +  N 
Sbjct: 205 VMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENE 264

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
               + VAY  ++   CQ      A+ + ++M       N   +NT I G C  GR+   
Sbjct: 265 KIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEV 324

Query: 395 MKLLDQMKQYECLP-NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
            KLL Q  +Y  +  +  +YN L+DG  R   + +AFE    + + G     +TYNT+L+
Sbjct: 325 EKLL-QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLN 383

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C  G + +A +L   ML  G   + I+ + ++  + K GK   A+ L       G   
Sbjct: 384 GFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARG-LA 442

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP-NFATWNVLVRSLFSNLGHLG 569
            ++++  +++ G+C +  M EA     +M  E  CP +  T+  L+   +  LG LG
Sbjct: 443 RNVVTINTVINGLCKNRRMTEAEELFHRM-KEWSCPCDSLTYRTLIDG-YCKLGDLG 497



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 100/193 (51%), Gaps = 1/193 (0%)

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  +  L   G +  A+ +  QM+    LP+  T   +     R  RV  A + + E+E+
Sbjct: 133 NRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEE 192

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+ +N+V Y+ ++ G CR G    A +LL  + ++G   + +T+ +++  YCK+G++  
Sbjct: 193 MGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEE 252

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A +++  I+   +   D ++Y +L+ G C  G M++A     +M++ G+  N   +N ++
Sbjct: 253 AEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMI 312

Query: 559 RSLFSNLGHLGPV 571
              +  LG +G V
Sbjct: 313 NG-YCKLGRMGEV 324



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 28/133 (21%), Positives = 61/133 (45%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L + C +     L  +++ +G+S +   + ++I+ + + G   +A K+  ++ + G
Sbjct: 722 LIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEG 781

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PTV  Y  ++  L  +        +   M  + ++PN  TY  L++   +   +    
Sbjct: 782 IQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAIT 841

Query: 121 KLLVEMGNKGCAP 133
           KL  EM   G  P
Sbjct: 842 KLYNEMHICGLLP 854


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 255/493 (51%), Gaps = 8/493 (1%)

Query: 38  NSYRRVGL--AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           N+ ++ G    + A+ +F R+      P+V  +N IL +++    +     +   M   G
Sbjct: 49  NAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRG 108

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P++ T +IL+   C    +  A+ +L  +  +G   +A++ TTI+  +C  G+V +A 
Sbjct: 109 ITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKAL 168

Query: 156 E-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E     +A  F      Y  LINGLCK     EAF LL +M  + + PNV+ Y+ I+  L
Sbjct: 169 EFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G V  +  +   +  RG +P++ ++T L+ G+   G+  E + L   M+      NV
Sbjct: 229 CKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNV 288

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ LI  LC  G + +A  +   M E    P++ T++ L+ G+    +++ A ++++ 
Sbjct: 289 YTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDT 348

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
               G +P+V +Y  ++   C+NN   +A SL  KM ++   PN VT+++ I GLC  GR
Sbjct: 349 FAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGR 408

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           + +A +L   +      PN+ TYN +LD L ++  V +A EL   + + G+  N+ +YN 
Sbjct: 409 ISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNI 468

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++G C++  + EA  L  +M       D++T+N +I   CK G++++A +L + +  GG
Sbjct: 469 LINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGG 528

Query: 511 EWNPDIISYTSLL 523
               D+I+Y  L 
Sbjct: 529 P-PVDVITYNILF 540



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 223/451 (49%), Gaps = 5/451 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM + G++ S      +IN Y  +G    A  +   + + G +        I+  L 
Sbjct: 100 LSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLC 159

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      + ++   G   +  TY  L+  LCK      A++LL +M  +   P+ V
Sbjct: 160 INGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVV 219

Query: 137 SYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            Y  IV  +CK G V EAR+L +   G G+      Y  LI+G C   +  E   LLC+M
Sbjct: 220 IYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDM 279

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           VDR ++ NV TY+ +I +LC  G +  +  +   M  RG  P++ +F +L+ GY L    
Sbjct: 280 VDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDV 339

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L++     G  P+V +Y+ LI G C N  +DEA+S+  +M      PN+ TYS+L
Sbjct: 340 VEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSL 399

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +  A ++++ +   G SPNV+ Y  M+  LC+  +  +A  L   M     
Sbjct: 400 IDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGL 459

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  ++N  I G C   R+D AM L ++M +   +P+  TYN L+DGL +  R+  A+E
Sbjct: 460 TPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWE 519

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           L   +   G  ++++TYN +     +   V+
Sbjct: 520 LFNVMHDGGPPVDVITYNILFDAFSKIQHVI 550



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 246/506 (48%), Gaps = 17/506 (3%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           ++ I DA+    R   ++P+          P+V  +N++L ++ K      A  L  +MG
Sbjct: 56  FDAIDDAVALFTRLITMHPL----------PSVVEFNMILGSIVKMKHYPTAISLSKQMG 105

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVSV----YNALINGLCKEHKIE 182
            +G  P  V+ + +++  C LG +  A   L M    G  +       ++ GLC   ++ 
Sbjct: 106 LRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVR 165

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A      +V +G   + +TY T+I+ LC +G    +  +L +M  +   PN+  +  ++
Sbjct: 166 KALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIV 225

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    G   EA DL++ ++  G  P+V  Y+ LIHG C  G   E   +   M + +  
Sbjct: 226 DGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVN 285

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            NV TY+ LID   K G L  A  + N MI  G  P++V +  ++   C  N   +A  L
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            +  A     P+  ++N  I G C   R+D A+ L ++M   +  PNI TY+ L+DGL +
Sbjct: 346 FDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCK 405

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R+  A+EL + I   G   N++TYN +L  +C+  +V +A +L   M   G   +  +
Sbjct: 406 SGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSS 465

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +NI+I  YCK  +++ A+ L + +       PD ++Y  L+ G+C SG +  A+     M
Sbjct: 466 YNILINGYCKSKRIDEAMNLFEEMHRR-NLVPDSVTYNCLIDGLCKSGRISHAWELFNVM 524

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHL 568
            + G   +  T+N+L  + FS + H+
Sbjct: 525 HDGGPPVDVITYNILFDA-FSKIQHV 549



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 5/272 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  LL  M    V+ +   +  +I++  + G+  +A  M   + E G +P +  +N ++ 
Sbjct: 272 VTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMS 331

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                N       ++      G+ P+V++YNIL+   CKNNR+D A  L  +M  K  AP
Sbjct: 332 GYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAP 391

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLL 188
           + V+Y++++  +CK G++  A EL      G     V  YN +++ LCK   +++A  L 
Sbjct: 392 NIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF 451

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M +RG+ PNV +Y+ +I+  C    ++ ++ +  +M  R   P+  ++  L+ G    
Sbjct: 452 NLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKS 511

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
           GR   A +L+N M   G   +V+ Y+ L    
Sbjct: 512 GRISHAWELFNVMHDGGPPVDVITYNILFDAF 543



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 1/179 (0%)

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           K   G   +D A+ L  ++     LP++  +N +L  ++++     A  L  ++   GI 
Sbjct: 51  KKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGIT 110

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            +IVT + +++  C  G +  AF +LG +L  G +L+AIT   I+   C  G+V  A++ 
Sbjct: 111 PSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEF 170

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            D +   G +  D ++Y +L+ G+C  G  +EAF  L KM  + + PN   +N++V  L
Sbjct: 171 HDSVVAQG-FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL 228



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 6/178 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    L  +M  + ++ +   + S+I+   + G    A ++F  I + G  P V  YN
Sbjct: 373 RIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYN 432

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LDAL           +++ M   G+ PNV +YNIL+   CK+ R+D A  L  EM  +
Sbjct: 433 IMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRR 492

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCK-EHKI 181
              PD+V+Y  ++  +CK G++  A EL      G     V  YN L +   K +H I
Sbjct: 493 NLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHVI 550



 Score = 42.0 bits (97), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 51/116 (43%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M++ L +   +D    L   M   G++ +   +  +IN Y +    ++A+ +F  +    
Sbjct: 434 MLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRN 493

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           L P    YN ++D L    R S    +++ M   G   +V TYNIL  A  K   V
Sbjct: 494 LVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/582 (25%), Positives = 273/582 (46%), Gaps = 42/582 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ +M+  G+  S      +     R+G      K+   +   G +P  + +N ++    
Sbjct: 101 IVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFC 160

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    +   +   M++   +P+V+ YNIL+ A C   +   A   +  M + GC P  V
Sbjct: 161 RKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLV 220

Query: 137 SYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++ T++++ C  G + EAR L   M+       V  YN L+NG  K   I +A  L  EM
Sbjct: 221 TFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEM 280

Query: 192 VDRGIDPNVITYSTII-----------------------------------SSLCDVGNV 216
             + + P+  T++ ++                                   S LC  G +
Sbjct: 281 KSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWL 340

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++  L  M  +G  P + +F S++  Y   G   +A   +  M++ G  P+ +  S+L
Sbjct: 341 DEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSL 400

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GL     + EA  + Y+M     P N   ++ L+DG+ + G++ GA  +WN M   G 
Sbjct: 401 IMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGI 460

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ VA++  +  L    +  +A+ +  +M+ +   PN   +N+ I+G C  GR+  A+ 
Sbjct: 461 HPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALM 520

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  +M +   LP+I T N +++GL +  R+K A ++   +   G+  +IVTYNT++ G C
Sbjct: 521 LEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYC 580

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +A   V   +++ KM   G   D  T+NI ++  C   K++ A+ +L+ +   G   PD 
Sbjct: 581 KAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGV-VPDT 639

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++Y +++ G+C +  ++ A I   K+L     PN  T N+L+
Sbjct: 640 VTYNTVMNGVC-TDVLERAMIVTAKLLKMAFVPNVVTANLLL 680



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 196/413 (47%), Gaps = 6/413 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I     L ++MK + V+     F  ++  + R G  E   ++   + + G      +YN
Sbjct: 269 DIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYN 328

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +  L              +M   G+ P V  +N ++ A  +    + AYK    M   
Sbjct: 329 ICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKF 388

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEA 184
           G  P +++ ++++  + KL +++EAR+L             + +  L++G  +   +  A
Sbjct: 389 GLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGA 448

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           + L  EM  RGI P+ + +S  I+ L  VG V+ +  +  QM  +G  PN   + SL++G
Sbjct: 449 YSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRG 508

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   GR  EA  L   M R+G LP++   + +I+GLC  G M  A  V   M      P+
Sbjct: 509 FCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPD 568

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TY+ LIDG+ KA + +   ++ N+M + G  P++  Y   +  LC      +A  ++E
Sbjct: 569 IVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLE 628

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           ++      P+TVT+NT + G+C    ++ AM +  ++ +   +PN+ T N LL
Sbjct: 629 ELISAGVVPDTVTYNTVMNGVC-TDVLERAMIVTAKLLKMAFVPNVVTANLLL 680



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 128/518 (24%), Positives = 231/518 (44%), Gaps = 56/518 (10%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA------- 158
           ++K+ C    V GA  L      K  A D VS+      I ++G V+ +RE+        
Sbjct: 25  MVKSSCVAAHVLGAQNL------KFLAQDVVSWV-----IRRVG-VDRSREVVEFMWKRH 72

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
             F S  SV + L+ G  K     EA  ++  M + G+ P+    + +   L  +G+  +
Sbjct: 73  AEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGS 132

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
              +L  M  +G  P   +F +++ G+   G       L   M +    P+V AY+ LI+
Sbjct: 133 VWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILIN 192

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
             C+ G   +A+     M +N C P++ T+  +I+ F   GN++ A  +++ M   G  P
Sbjct: 193 AYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIP 252

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF----------------- 381
           NVV Y  ++    +     QA+ L E+M  +   P+  TFN                   
Sbjct: 253 NVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLL 312

Query: 382 ------------------IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
                             + GLC  G +D AMK L+ M +    P +  +N ++    R 
Sbjct: 313 RDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRA 372

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
              ++A++    + K G+  + +T ++++ G+ +   + EA  LL +M++EG  ++   F
Sbjct: 373 GLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAF 432

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            +++  Y + G V  A  L + + G G  +PD +++++ + G+   G + EA+    +M 
Sbjct: 433 TLLLDGYFRMGDVAGAYSLWNEMEGRG-IHPDAVAFSAFINGLSIVGLVDEAYDVFLQMS 491

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            +G  PN   +N L+R  F N G L    +L+  MA K
Sbjct: 492 KKGFMPNNFVYNSLIRG-FCNSGRLQEALMLEREMARK 528



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 173/350 (49%), Gaps = 6/350 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D     L+ M  +G++ +   F S+I +Y R GL E+A K +  + +FGL P+    + 
Sbjct: 340 LDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSS 399

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++  L    R      +   M  +G+  N   + +LL    +   V GAY L  EM  +G
Sbjct: 400 LIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRG 459

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
             PDAV+++  ++ +  +G V+EA ++ ++     F     VYN+LI G C   +++EA 
Sbjct: 460 IHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEAL 519

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM  +G+ P++ T + II+ LC  G ++++  +   M   G  P+I ++ +L+ GY
Sbjct: 520 MLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGY 579

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                T    ++ N+M   G+ P++  Y+  +HGLC+   M  AV +  ++      P+ 
Sbjct: 580 CKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDT 639

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            TY+ +++G      L  A  +  +++     PNVV    ++   C+  M
Sbjct: 640 VTYNTVMNGVC-TDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGM 688



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 148/319 (46%), Gaps = 31/319 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +   + LL +M VEG+  ++  F  +++ Y R+G    A  ++  +   G
Sbjct: 400 LIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRG 459

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    ++  ++ L           ++  M + G  PN F YN L++  C + R+  A 
Sbjct: 460 IHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEAL 519

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  EM  KG  PD  +   I++ +CK G+++ A +                        
Sbjct: 520 MLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASD------------------------ 555

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 +   M   G+ P+++TY+T+I   C   +  ++  ++ +M+  G +P+I ++  
Sbjct: 556 ------VFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNI 609

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
            L G   G +   A  +   +I  G +P+ V Y+T+++G+C++  ++ A+ V+ ++ + +
Sbjct: 610 RLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTD-VLERAMIVTAKLLKMA 668

Query: 301 CPPNVTTYSALIDGFAKAG 319
             PNV T + L+  F K G
Sbjct: 669 FVPNVVTANLLLSHFCKQG 687



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 125/261 (47%), Gaps = 9/261 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ G   L  +M+  G+      F + IN    VGL ++A  +F ++ + G  P   +YN
Sbjct: 444 DVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYN 503

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++       R      +   M R G+ P++FT NI++  LCK  R+  A  +   M + 
Sbjct: 504 SLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT 563

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD V+Y T++   CK        E+     A  +   ++ YN  ++GLC   K+  A
Sbjct: 564 GLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRA 623

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
             +L E++  G+ P+ +TY+T+++ +C DV  +E ++ +  ++      PN+ +   LL 
Sbjct: 624 VMMLEELISAGVVPDTVTYNTVMNGVCTDV--LERAMIVTAKLLKMAFVPNVVTANLLLS 681

Query: 244 GYLLGGRTHEASDLWNRMIRE 264
            +   G   E + +W + + E
Sbjct: 682 HFCKQG-MPEKTIMWGQKLNE 701


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 236/463 (50%), Gaps = 9/463 (1%)

Query: 42  RVGLAE----QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME 97
           R GL++     A+ +F  + +    P++  ++ +L A+   N+F ++      M+  G+ 
Sbjct: 51  RTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGIS 110

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            N++TYNIL+   C+ +R+  A  LL +M   G  PD V+  ++++  C   ++ +A  L
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170

Query: 158 A-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                 M +      +  LI+GL   +K  EA  L+  MV RG  P+++TY  +++ LC 
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G+ + +L +L +M       N+  +++++          +A +L+  M  +G  PNV+ 
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS+LI  LC+ G   +A  +   M E    PN+ T+SALID F K G L+ A +++  MI
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                PN+  Y+ ++   C  +   +A  ++E M  ++C PN VT+NT I G C   RVD
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             M+L  +M Q   + N  TY  L+ G  +      A  +  ++   G+  NI+TYN +L
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
            G+C+ G + +A  +   +     + D  T+NI+I   CK GK
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 221/432 (51%), Gaps = 5/432 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  + +  + D V    ++M++ G+S +   +  +IN + R      AL +  ++ + G
Sbjct: 84  LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +   N +L+     NR S    +   M   G +P+  T+  L+  L  +N+   A 
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+  M  +GC PD V+Y  +V+ +CK G  + A  L     A +  + V +Y+ +I+ L
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK    ++A  L  EM ++G+ PNVITYS++IS LC+ G    +  +L  M  R  NPN+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F++L+  ++  G+  +A  L+  MI+    PN+  YS+LI+G C    + EA  +   
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C PNV TY+ LI+GF KA  +    +++  M   G   N V YT ++    Q   
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  + ++M      PN +T+N  + GLC  G++  AM + + +++    P+I TYN 
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503

Query: 416 LLDGLLRVNRVK 427
           +++G+ +  + K
Sbjct: 504 MIEGMCKAGKWK 515



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 241/470 (51%), Gaps = 14/470 (2%)

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           + Y  +L+    +  +D A  L   M      P  + ++ ++S+I K+ + +    L + 
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD----LVIS 99

Query: 161 FGSGVSV---------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
           FG  + +         YN LIN  C+  ++  A  LL +M+  G +P+++T +++++  C
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               +  ++ ++ QM   G  P+  +FT+L+ G  L  +  EA  L +RM++ G  P++V
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV 219

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y  +++GLC  G  D A+++  +ME      NV  YS +ID   K  +   A  ++  M
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
            + G  PNV+ Y+ ++  LC    +  A  L+  M      PN VTF+  I      G++
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A KL ++M +    PNI TY+ L++G   ++R+ EA +++  + +     N+VTYNT+
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           ++G C+A  V +  +L  +M   G   + +T+  +I+ + +    +NA  +  ++   G 
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG- 458

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +P+I++Y  LL G+C +G + +A +  + +    + P+  T+N+++  +
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 36/172 (20%)

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A+ L   M Q    P+I  +++LL  + ++N+         ++E  GI  N+ TYN 
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++  CR   +  A  LLGKM+  G                                   
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLG----------------------------------- 143

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + PDI++  SLL G C+   + +A   + +M+  G  P+  T+  L+  LF
Sbjct: 144 -YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 259/524 (49%), Gaps = 7/524 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  MK  G+  +   +  ++    + G   +AL+++  +   G+ P+V+ Y+ ++ A   
Sbjct: 148 LPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGK 207

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G++PNV++Y I ++ L +  R D AY++L +M N+GC PD ++
Sbjct: 208 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVIT 267

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
           +T ++  +C  G++ +A+++  +            Y  L++        +    +   M 
Sbjct: 268 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 327

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + NV+ Y+ +I +LC VG V  +L +  +M  +G  P  +S+ SL+ G+L   R  
Sbjct: 328 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 387

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 388 DALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVL 447

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G AK+G L  A ++++ + + G SP+ + YT M+K   + + F +A  +   M   NC 
Sbjct: 448 FGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV 507

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   GR D A ++  Q+K+    P   TYN LL GL R  +VKE   L
Sbjct: 508 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 567

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+       N++TYNTIL  +C+ G V +A  +L  M  +G   D  ++N +IY   K
Sbjct: 568 LEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVK 627

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + + N A  +  +++      PD  +  ++L      G M+EA 
Sbjct: 628 EERYNEAFSIFCQMK--KVLIPDYATLCTILPSFVKIGLMKEAL 669



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 281/588 (47%), Gaps = 47/588 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L + M + G   +    +  IN Y + G + +A++ +  ++  G+ P V   N +L  L 
Sbjct: 392 LFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLA 451

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R  M   ++  +K  G+ P+  TY +++K   K ++ D A K+  +M    C PD +
Sbjct: 452 KSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVL 511

Query: 137 SYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +  +++ ++ K G+ +EA       +E+ +    G   YN L+ GL +E K++E   LL 
Sbjct: 512 AVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGT--YNTLLAGLGREGKVKEVMHLLE 569

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM      PN+ITY+TI+  LC  G V  +L +L  M  +GC P++ S+ +++ G +   
Sbjct: 570 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 629

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTT 307
           R +EA  ++ +M ++  +P+     T++      G M EA+ +   Y ++  S     + 
Sbjct: 630 RYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 688

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           +S L++G  K   +  + +    + S+G + +      ++K LC+     +AH L++K  
Sbjct: 689 HS-LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFK 747

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                  T  +N+ I GL     +D A  L  +MK+  C P+  TYN LLD + +  R++
Sbjct: 748 SFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIE 807

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           E  ++  E+ + G +   VTYNTI+ G+ ++  + +A  L   ++ +G      T+  ++
Sbjct: 808 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 867

Query: 488 YAYCKQGKVNNAIQLLD---------------------RIRGGGEW-------------N 513
               K G++ +A  L +                     RI G  E              N
Sbjct: 868 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 927

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PDI SYT ++  +C +G + +   Y +++L  G+ P+  T+N+L+  L
Sbjct: 928 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 975



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 254/554 (45%), Gaps = 8/554 (1%)

Query: 14   VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
             + +  ++K  GVS     +  +I    +    ++A+K+FY + E    P V   N ++D
Sbjct: 459  AKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLID 518

Query: 74   ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
             L    R      I+  +K   +EP   TYN LL  L +  +V     LL EM +    P
Sbjct: 519  TLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPP 578

Query: 134  DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
            + ++Y TI+  +CK G V +A ++     +      +S YN +I GL KE +  EAF + 
Sbjct: 579  NLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIF 638

Query: 189  CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLL 247
            C+M  + + P+  T  TI+ S   +G ++ +L I+   F++ G   +  S  SL++G L 
Sbjct: 639  CQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 697

Query: 248  GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                 ++ +    +   G   +      LI  LC      EA  +  + +          
Sbjct: 698  KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 757

Query: 308  YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            Y++LI G      +  A  ++  M   GC P+   Y  ++  + ++    +   + E+M 
Sbjct: 758  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817

Query: 368  FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
             +      VT+NT I GL    R++ A+ L   +      P   TY  LLDGLL+  R++
Sbjct: 818  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 877

Query: 428  EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            +A  L  E+ + G + N   YN +L+G   AG   +   L   M+ +G   D  ++ III
Sbjct: 878  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 937

Query: 488  YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
               CK G++N+ +    ++   G   PD+I+Y  L+ G+  S  ++EA     +M  +GI
Sbjct: 938  DTLCKAGQLNDGLTYFRQLLEMG-LEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 996

Query: 548  CPNFATWNVLVRSL 561
             PN  T+N L+  L
Sbjct: 997  VPNLYTYNSLILHL 1010



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/551 (25%), Positives = 242/551 (43%), Gaps = 75/551 (13%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I++  + G  ++A ++FY+++E  L+PT   YN +L  L  E +   +  +   M   
Sbjct: 515  SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 574

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA---------------------- 132
               PN+ TYN +L  LCKN  V+ A  +L  M  KGC                       
Sbjct: 575  NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 634

Query: 133  ------------PDAVSYTTIVSSICKLGQVEEAR------------------------- 155
                        PD  +  TI+ S  K+G ++EA                          
Sbjct: 635  FSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEG 694

Query: 156  -------ELAMRFG-----SGVSVYN----ALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                   E ++ F      SG+++ +     LI  LCK+ K  EA  L+ +    G+   
Sbjct: 695  ILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 754

Query: 200  VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
               Y+++I  L D   ++ + G+  +M   GC P+  ++  LL       R  E   +  
Sbjct: 755  TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 814

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             M R+G+    V Y+T+I GL  +  +++A+ + Y +      P   TY  L+DG  KAG
Sbjct: 815  EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 874

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             +  A  ++N M+  GC  N   Y  ++          +   L + M  +   P+  ++ 
Sbjct: 875  RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 934

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I  LC  G+++  +    Q+ +    P++ TYN L+DGL +  R++EA  L  E++K 
Sbjct: 935  IIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKK 994

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
            GI  N+ TYN+++  + +AG   EA ++  ++L +G K +  T+N +I  Y   G  ++A
Sbjct: 995  GIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSA 1054

Query: 500  IQLLDRIRGGG 510
                 R+  GG
Sbjct: 1055 YAAYGRMIVGG 1065



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/523 (23%), Positives = 243/523 (46%), Gaps = 40/523 (7%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG + ++  V +LL++M       +   + ++++   + G    AL M Y +   G
Sbjct: 551  LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 610

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKR--------------------------- 93
              P +  YN ++  L+ E R++    I+  MK+                           
Sbjct: 611  CIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALH 670

Query: 94   --------DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                     G + +  + + L++ + K   ++ + +    + + G   D      ++  +
Sbjct: 671  IIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 730

Query: 146  CKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK  +  EA EL  +F S GVS+    YN+LI GL  E+ I+ A  L  EM + G  P+ 
Sbjct: 731  CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 790

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             TY+ ++ ++     +E  L +  +M  +G      ++ +++ G +   R  +A DL+  
Sbjct: 791  FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 850

Query: 261  MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
            ++ +GF P    Y  L+ GL   G +++A ++  +M E  C  N T Y+ L++G   AGN
Sbjct: 851  LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 910

Query: 321  LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
                  ++  M+  G +P++ +YT ++  LC+    +   +   ++      P+ +T+N 
Sbjct: 911  TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 970

Query: 381  FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
             I GL    R++ A+ L ++M++   +PN+ TYN L+  L +  +  EA ++  E+   G
Sbjct: 971  LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1030

Query: 441  IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             + N+ TYN ++ G   +G    A+   G+M++ G   ++ T+
Sbjct: 1031 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTY 1073



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 236/541 (43%), Gaps = 17/541 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKP----TVKIYNHILDALLAENRFSMINPIYSN 90
            VI++ R      +AL+   R R    KP    T    N++L+ +    R   +  ++  
Sbjct: 59  DVIHALRSADGPAEALE---RFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDV 115

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+R  ++ NV T+  +   L     +  A   L  M   G   +A +Y  +V  + K G 
Sbjct: 116 MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 175

Query: 151 VEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA E+    M  G    V  Y+ L+    K   +E   WLL EM   G+ PNV +Y+ 
Sbjct: 176 DREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 235

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            I  L      + +  IL +M   GC P++ + T L++     GR  +A D++ +M +  
Sbjct: 236 CIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 295

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+ V Y TL+     NG     + +   M+ +    NV  Y+A+ID   + G +  A 
Sbjct: 296 QKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 355

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++++ M   G  P   +Y  ++    + + F  A  L + M      PN  T   FI   
Sbjct: 356 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY 415

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G    A++  + MK    +P++   N +L GL +  R+  A  +  E++  G+  + 
Sbjct: 416 GKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 475

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TY  ++    +A    EA ++   M+      D +  N +I    K G+ + A ++  +
Sbjct: 476 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 535

Query: 506 IRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           ++   E N  P   +Y +LL G+   G ++E    L++M +    PN  T+N ++  L  
Sbjct: 536 LK---EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 592

Query: 564 N 564
           N
Sbjct: 593 N 593



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 5/323 (1%)

Query: 103  YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE---ARELAM 159
            YN L+  L   N +D A  L  EM   GC PD  +Y  ++ ++ K  ++EE    +E   
Sbjct: 758  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817

Query: 160  RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            R G  S    YN +I+GL K  ++E+A  L   ++ +G  P   TY  ++  L   G +E
Sbjct: 818  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 877

Query: 218  TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
             +  +  +M   GC  N   +  LL G+ + G T +   L+  M+ +G  P++ +Y+ +I
Sbjct: 878  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 937

Query: 278  HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              LC  G +++ ++   Q+ E    P++ TY+ LIDG  K+  L  A  ++N M   G  
Sbjct: 938  DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 997

Query: 338  PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            PN+  Y  ++  L +     +A  + E++  +   PN  T+N  I+G    G  D A   
Sbjct: 998  PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAA 1057

Query: 398  LDQMKQYECLPNITTYNELLDGL 420
              +M    CLPN +TY +L + L
Sbjct: 1058 YGRMIVGGCLPNSSTYMQLPNQL 1080



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/567 (21%), Positives = 254/567 (44%), Gaps = 8/567 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I   + +  +MK          +I++++ +   G ++  ++++  ++  G
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  ++DAL    R      ++  MK+ G+ P  ++YN L+    K +R   A 
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
           +L   M   G  P+  ++   ++   K G+  +A    EL    G    V   NA++ GL
Sbjct: 391 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 450

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++  A  +  E+   G+ P+ ITY+ +I         + ++ I   M    C P++
Sbjct: 451 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 510

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +  SL+      GR  EA  ++ ++      P    Y+TL+ GL   G + E + +  +
Sbjct: 511 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 570

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  ++ PPN+ TY+ ++D   K G +  A  +   M + GC P++ +Y  ++  L +   
Sbjct: 571 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 630

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPNITTYN 414
           +++A S+  +M  +   P+  T  T +      G +  A+ ++ D   Q     + ++ +
Sbjct: 631 YNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCH 689

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++G+L+   ++++ E    I   GI L+      ++  +C+    +EA +L+ K    
Sbjct: 690 SLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSF 749

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G  L    +N +I     +  ++ A  L   ++  G   PD  +Y  LL  +  S  ++E
Sbjct: 750 GVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG-CGPDEFTYNLLLDAMGKSMRIEE 808

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
                ++M  +G    + T+N ++  L
Sbjct: 809 MLKVQEEMHRKGYESTYVTYNTIISGL 835



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 12   DGVQYLLQ--QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            DG+ Y  Q  +M +E    +  + I  +   +R+   E+A+ +F  +++ G+ P +  YN
Sbjct: 948  DGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL---EEAVSLFNEMQKKGIVPNLYTYN 1004

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             ++  L    + +    +Y  +   G +PNVFTYN L++    +   D AY     M   
Sbjct: 1005 SLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVG 1064

Query: 130  GCAPDAVSYTTI 141
            GC P++ +Y  +
Sbjct: 1065 GCLPNSSTYMQL 1076


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 259/524 (49%), Gaps = 7/524 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  MK  G+  +   +  ++    + G   +AL+++  +   G+ P+V+ Y+ ++ A   
Sbjct: 183 LPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGK 242

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G++PNV++Y I ++ L +  R D AY++L +M N+GC PD ++
Sbjct: 243 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVIT 302

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
           +T ++  +C  G++ +A+++  +            Y  L++        +    +   M 
Sbjct: 303 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 362

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + NV+ Y+ +I +LC VG V  +L +  +M  +G  P  +S+ SL+ G+L   R  
Sbjct: 363 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 422

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 423 DALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVL 482

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G AK+G L  A ++++ + + G SP+ + YT M+K   + + F +A  +   M   NC 
Sbjct: 483 FGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV 542

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   GR D A ++  Q+K+    P   TYN LL GL R  +VKE   L
Sbjct: 543 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 602

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+       N++TYNTIL  +C+ G V +A  +L  M  +G   D  ++N +IY   K
Sbjct: 603 LEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVK 662

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + + N A  +  +++      PD  +  ++L      G M+EA 
Sbjct: 663 EERYNEAFSIFCQMK--KVLIPDYATLCTILPSFVKIGLMKEAL 704



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/552 (25%), Positives = 273/552 (49%), Gaps = 16/552 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L + M + G   +    +  IN Y + G + +A++ +  ++  G+ P V   N +L  L 
Sbjct: 427 LFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLA 486

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R  M   ++  +K  G+ P+  TY +++K   K ++ D A K+  +M    C PD +
Sbjct: 487 KSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVL 546

Query: 137 SYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +  +++ ++ K G+ +EA       +E+ +    G   YN L+ GL +E K++E   LL 
Sbjct: 547 AVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGT--YNTLLAGLGREGKVKEVMHLLE 604

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM      PN+ITY+TI+  LC  G V  +L +L  M  +GC P++ S+ +++ G +   
Sbjct: 605 EMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 664

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTT 307
           R +EA  ++ +M ++  +P+     T++      G M EA+ +   Y ++  S     + 
Sbjct: 665 RYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 723

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           +S L++G  K   +  + +    + S+G + +      ++K LC+     +AH L++K  
Sbjct: 724 HS-LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFK 782

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                  T  +N+ I GL     +D A  L  +MK+  C P+  TYN LLD + +  R++
Sbjct: 783 SFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIE 842

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           E  ++  E+ + G +   VTYNTI+ G+ ++  + +A  L   ++ +G      T+  ++
Sbjct: 843 EMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 902

Query: 488 YAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
               K G++ +A  L +  +  G + N  I  Y  LL G   +G  ++     Q M+++G
Sbjct: 903 DGLLKAGRIEDAENLFNEMLEYGCKANCTI--YNILLNGHRIAGNTEKVCHLFQDMVDQG 960

Query: 547 ICPNFATWNVLV 558
           I P+  ++ +++
Sbjct: 961 INPDIKSYTIII 972



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 236/541 (43%), Gaps = 17/541 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKP----TVKIYNHILDALLAENRFSMINPIYSN 90
            VI++ R      +AL+   R R    KP    T    N++L+ +    R   +  ++  
Sbjct: 94  DVIHALRSADGPAEALE---RFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAEVFDV 150

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+R  ++ NV T+  +   L     +  A   L  M   G   +A +Y  +V  + K G 
Sbjct: 151 MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 210

Query: 151 VEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA E+    M  G    V  Y+ L+    K   +E   WLL EM   G+ PNV +Y+ 
Sbjct: 211 DREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 270

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            I  L      + +  IL +M   GC P++ + T L++     GR  +A D++ +M +  
Sbjct: 271 CIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 330

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+ V Y TL+     NG     + +   M+ +    NV  Y+A+ID   + G +  A 
Sbjct: 331 QKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 390

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++++ M   G  P   +Y  ++    + + F  A  L + M      PN  T   FI   
Sbjct: 391 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY 450

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G    A++  + MK    +P++   N +L GL +  R+  A  +  E++  G+  + 
Sbjct: 451 GKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 510

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TY  ++    +A    EA ++   M+      D +  N +I    K G+ + A ++  +
Sbjct: 511 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 570

Query: 506 IRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           ++   E N  P   +Y +LL G+   G ++E    L++M +    PN  T+N ++  L  
Sbjct: 571 LK---EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 627

Query: 564 N 564
           N
Sbjct: 628 N 628



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/570 (21%), Positives = 255/570 (44%), Gaps = 8/570 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I   + +  +MK          +I++++ +   G ++  ++++  ++  G
Sbjct: 306 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 365

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  ++DAL    R      ++  MK+ G+ P  ++YN L+    K +R   A 
Sbjct: 366 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 425

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
           +L   M   G  P+  ++   ++   K G+  +A    EL    G    V   NA++ GL
Sbjct: 426 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 485

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++  A  +  E+   G+ P+ ITY+ +I         + ++ I   M    C P++
Sbjct: 486 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 545

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +  SL+      GR  EA  ++ ++      P    Y+TL+ GL   G + E + +  +
Sbjct: 546 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 605

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  ++ PPN+ TY+ ++D   K G +  A  +   M + GC P++ +Y  ++  L +   
Sbjct: 606 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 665

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPNITTYN 414
           +++A S+  +M  +   P+  T  T +      G +  A+ ++ D   Q     + ++ +
Sbjct: 666 YNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCH 724

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++G+L+   ++++ E    I   GI L+      ++  +C+    +EA +L+ K    
Sbjct: 725 SLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSF 784

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G  L    +N +I     +  ++ A  L   ++  G   PD  +Y  LL  +  S  ++E
Sbjct: 785 GVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG-CGPDEFTYNLLLDAMGKSMRIEE 843

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
                ++M  +G    + T+N ++  L  +
Sbjct: 844 MLKVQEEMHRKGYESTYVTYNTIISGLVKS 873



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/424 (22%), Positives = 173/424 (40%), Gaps = 40/424 (9%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+I++  + G  ++A ++FY+++E  L+PT   YN +L  L  E +   +  +   M   
Sbjct: 550 SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 609

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV------------ 142
              PN+ TYN +L  LCKN  V+ A  +L  M  KGC PD  SY T++            
Sbjct: 610 NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEA 669

Query: 143 ----------------------SSICKLGQVEEA----RELAMRFGSGV--SVYNALING 174
                                  S  K+G ++EA    ++  ++ GS    S  ++L+ G
Sbjct: 670 FSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEG 729

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           + K+  IE++      +   GI  +      +I  LC       +  ++ +    G +  
Sbjct: 730 ILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLK 789

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
              + SL+ G +       A  L+  M   G  P+   Y+ L+  +  +  ++E + V  
Sbjct: 790 TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQE 849

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M          TY+ +I G  K+  L  A  ++  ++S G SP    Y  ++  L +  
Sbjct: 850 EMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAG 909

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A +L  +M    C  N   +N  + G    G  +    L   M      P+I +Y 
Sbjct: 910 RIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYT 969

Query: 415 ELLD 418
            ++D
Sbjct: 970 IIID 973



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 30/277 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++E + +K  I+      + +   G++  +     +I    +   A +A ++  + + FG
Sbjct: 726 LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFG 785

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +     +YN ++  L+ EN   +   +++ MK  G  P+ FTYN+LL A+ K+ R++   
Sbjct: 786 VSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEML 845

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K+  EM  KG     V+Y TI+S                              GL K  +
Sbjct: 846 KVQEEMHRKGYESTYVTYNTIIS------------------------------GLVKSRR 875

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E+A  L   ++ +G  P   TY  ++  L   G +E +  +  +M   GC  N   +  
Sbjct: 876 LEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNI 935

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
           LL G+ + G T +   L+  M+ +G  P++ +Y+ +I
Sbjct: 936 LLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 157/542 (28%), Positives = 260/542 (47%), Gaps = 33/542 (6%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ SY R G    A+++ + +++ G  P + I N  ++ L+   R          M+
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR 191

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G+EP+V+TYN L+K LC   RV  A +++  M   GC PD +SY T++S +CK  +VE
Sbjct: 192 RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVE 251

Query: 153 EARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E R L  R  +   +      YN LI+GL K    +EA   L E   +    + + YS I
Sbjct: 252 EVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAI 311

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           + S C  G +  +  I+G+M  +GC P++ ++++++ G+   G   +A  +   M +   
Sbjct: 312 VHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDC 371

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN V ++ L++GLC  G   EA  +  + EE    P+  TYS ++ GF + G L  +  
Sbjct: 372 KPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCD 431

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +  +M+  G  P  V    ++  LC++    +A   +E+   + C  N V F T I G  
Sbjct: 432 VVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFS 491

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G ++ A+ L+D M      P++ TY  ++D L +  R+KEA  LV ++   G+    V
Sbjct: 492 RQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPV 551

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY T++H  C  G + +   LL KML       A  +N ++   C  GK+N A       
Sbjct: 552 TYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSA--YNQVVEKLCAFGKLNEAY------ 603

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEA---FIYLQKMLNEGICPNFATWNVLVRSLFS 563
                         SLL+ I  +  +++A    I ++  LN G+      +NV  R    
Sbjct: 604 --------------SLLYKILRTASVRDAQTCHILMESFLNRGL--GLQAYNVACRMFRR 647

Query: 564 NL 565
           NL
Sbjct: 648 NL 649



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/379 (21%), Positives = 169/379 (44%), Gaps = 40/379 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +    D     L++ + +     E  + ++++S+   G   +A ++   +   G
Sbjct: 276 LIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKG 335

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  Y+ ++D             +  +M ++  +PN  T+  LL  LCK  +   A+
Sbjct: 336 CQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAW 395

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALING 174
           +LL +   +   P  ++Y+ ++    + G+++E+ ++ ++      F + V + N LI+ 
Sbjct: 396 ELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEI-NLLIHA 454

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK+ K  EA   + +   +G   NV+ ++T+I      G++E++L ++  M++   +P+
Sbjct: 455 LCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPD 514

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH---------------- 278
           + ++T ++      GR  EA+ L  +M+  G LP  V Y T+IH                
Sbjct: 515 VVTYTVVVDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLE 574

Query: 279 -----------------GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
                             LC+ G ++EA S+ Y++   +   +  T   L++ F   G  
Sbjct: 575 KMLARQEMKSAYNQVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESFLNRGLG 634

Query: 322 LGASQIWNRMISNGCSPNV 340
           L A  +  RM      P+V
Sbjct: 635 LQAYNVACRMFRRNLIPDV 653


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 255/492 (51%), Gaps = 16/492 (3%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           I+  + + G   +    N +LK LC N  V  A +   E+ N G + + VSY  +++ +C
Sbjct: 94  IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153

Query: 147 KLGQVEEAREL-------------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           + G+V EA  L                    V +Y+ +I+ LC+   ++E F    EM+ 
Sbjct: 154 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 213

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
            G+ PN  TY ++I  LC VG      G++ +M  RG + +++ FT L+ G    G   E
Sbjct: 214 NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVE 273

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A ++++ M+  G+ PN+V  + L+ G C  G++D A  +   + E     +V TY+  I 
Sbjct: 274 AREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIH 333

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G+ K G +  A ++++ M   G  PN+V Y  ++  LC+      A  +++ M      P
Sbjct: 334 GYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTP 393

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + VT    + GLC   R+D A+ L +Q+ +    P++ +Y  L+ G     R+ EA  L+
Sbjct: 394 DIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLL 453

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            ++    +  +IVTY+ ++ G+CR+G +  A++LL +M ++G   D IT++I++ A  K+
Sbjct: 454 RDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKK 513

Query: 494 GKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
             ++ A+ L ++ I+ G E  PD++ YT ++ G C S  + EA    ++M  + + P+  
Sbjct: 514 QHLDEAVFLFNQMIKRGLE--PDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIV 571

Query: 553 TWNVLVRSLFSN 564
           T+ +L  ++F +
Sbjct: 572 TYTILFNAVFKS 583



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 229/430 (53%), Gaps = 6/430 (1%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           NV  Y+I++  LC+N  VD  ++   EM   G  P+  +Y +++  +C +G+  E   L 
Sbjct: 184 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243

Query: 159 ---MRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              +R G  VSVY    LI+GLCK   + EA  +  EMV+RG +PN++T + ++   C  
Sbjct: 244 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLK 303

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           GNV+ +  +   +   G   ++ ++   + GY   GR  +A  +++ M REG +PN+V Y
Sbjct: 304 GNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTY 363

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++LI  LC  G +  A  +   M  +   P++ T   L+DG  K+  L  A  ++N+++ 
Sbjct: 364 NSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVE 423

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G +P+V +YT ++   C +    +A +L+  M  +N  P+ VT++  I GLC  GR+  
Sbjct: 424 SGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISN 483

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +LL++M     LP+  TY+ LLD L +   + EA  L  ++ K G++ +++ Y  ++ 
Sbjct: 484 AWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMID 543

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C++  + EA  L  +M ++    D +T+ I+  A  K G  +   + ++ IR      
Sbjct: 544 GYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINP-P 602

Query: 514 PDIISYTSLL 523
           P ++ Y + L
Sbjct: 603 PRVLKYLAAL 612



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/504 (29%), Positives = 243/504 (48%), Gaps = 14/504 (2%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           +  +G    +  +F +I + G        N +L  L            +  +  +G   N
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKG--------CAPDAVSYTTIVSSICKLGQV 151
             +Y IL+  LC+N RV+ A  LL  +  +            + V Y+ ++  +C+ G V
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 152 EEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +E  E      G+GV      Y +LI GLC   K  E F L+ EM+ RG+D +V  ++ +
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC  G +  +  +  +M  RG  PNI + T+L+ GY L G    A +L++ +   GF
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF 321

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             +V  Y+  IHG C  G + +AV V  +M      PN+ TY++LID   KAG + GA +
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I   M  +G +P++V    ++  LC++    QA  L  ++      P+  ++   I G C
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R+  AM LL  M     +P+I TY+ L+DGL R  R+  A+ L+ E+   G   + +
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY+ +L  + +   + EA  L  +M+  G + D + + I+I  YCK  +++ AI L   +
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561

Query: 507 RGGGEWNPDIISYTSLLWGICNSG 530
                  PDI++YT L   +  SG
Sbjct: 562 H-MKNLVPDIVTYTILFNAVFKSG 584



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 211/432 (48%), Gaps = 16/432 (3%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           +G      N ++ GLC    + +A     E+V+ G   N ++Y  +I+ LC+ G V  ++
Sbjct: 103 YGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAV 162

Query: 221 GILGQM-----------FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            +L  +           FV+G   N+  ++ ++      G   E  + +N M+  G  PN
Sbjct: 163 NLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPN 219

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
              Y +LI GLC  G   E   +  +M       +V  ++ LIDG  K G L+ A ++++
Sbjct: 220 EFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFD 279

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M++ G  PN+V  T ++   C       A  L + +       +  T+N FI G C  G
Sbjct: 280 EMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVG 339

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           RV  A+++ D+M +   +PNI TYN L+D L +   V  A+E+V  + + G+  +IVT  
Sbjct: 340 RVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCC 399

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +L G+C++  + +A  L  +++  G   D  ++ I+I+  C   ++  A+ LL R    
Sbjct: 400 ILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLL-RDMHL 458

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
               P I++Y+ L+ G+C SG +  A+  L +M  +G  P+  T+++L+ +L+    HL 
Sbjct: 459 KNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKK-QHLD 517

Query: 570 PVYILDDIMANK 581
               L + M  +
Sbjct: 518 EAVFLFNQMIKR 529



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 196/387 (50%), Gaps = 11/387 (2%)

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           +F +  +++ RG   + +  +T++  LC  G V  +L    ++   G + N  S+  L+ 
Sbjct: 91  SFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILIN 150

Query: 244 GYLLGGRTHEASDLWNRMIR-------EGFL--PNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           G    GR +EA +L  RMI        +GF    NVV YS +I  LC NG +DE      
Sbjct: 151 GLCENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYN 209

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M  N   PN  TY +LI G    G  L    + + MI  G   +V  +T ++  LC+N 
Sbjct: 210 EMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNG 269

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A  + ++M      PN VT    + G C  G VD A +L D + ++    ++ TYN
Sbjct: 270 MLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYN 329

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             + G  +V RV++A  +  E+ + G+  NIVTYN+++  +C+AG V  A++++  M   
Sbjct: 330 VFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRS 389

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D +T  I++   CK  +++ AI L +++   G   PD+ SYT L+ G C S  M E
Sbjct: 390 GLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG-LTPDVWSYTILIHGCCTSRRMGE 448

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           A   L+ M  + + P+  T++ L+  L
Sbjct: 449 AMNLLRDMHLKNLVPHIVTYSCLIDGL 475



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 204/461 (44%), Gaps = 48/461 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFIS--------VINSYRRVGLAEQALKM 52
           +I  L E   ++    LL+ ++ E     +G F+         VI+   R G  ++  + 
Sbjct: 148 LINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEF 207

Query: 53  FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           +  +   G+ P    Y  ++  L    +F     +   M R G++ +V+ + +L+  LCK
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSV 167
           N  +  A ++  EM N+G  P+ V+ T ++   C  G V+ AREL        F   V  
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV----------- 216
           YN  I+G CK  ++ +A  +  EM   G+ PN++TY+++I  LC  G V           
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387

Query: 217 ------------------------ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
                                   + ++ +  Q+   G  P++ S+T L+ G     R  
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMG 447

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA +L   M  +  +P++V YS LI GLC +G +  A  +  +M      P+  TYS L+
Sbjct: 448 EAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILL 507

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           D   K  +L  A  ++N+MI  G  P+V+ YT M+   C++    +A +L  +M  +N  
Sbjct: 508 DALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLV 567

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           P+ VT+      +   G   +  K ++ ++     P +  Y
Sbjct: 568 PDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 184/382 (48%), Gaps = 8/382 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G+  S  VF  +I+   + G+  +A +MF  +   G +P +     ++    
Sbjct: 242 LVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYC 301

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +    M   ++  +   G + +V+TYN+ +   CK  RV  A ++  EM  +G  P+ V
Sbjct: 302 LKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIV 361

Query: 137 SYTTIVSSICKLGQVEEARELA---MRFGSGVSVYNA--LINGLCKEHKIEEAFWLLCEM 191
           +Y +++  +CK G+V  A E+     R G    +     L++GLCK  ++++A  L  ++
Sbjct: 362 TYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL 421

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V+ G+ P+V +Y+ +I   C    +  ++ +L  M ++   P+I +++ L+ G    GR 
Sbjct: 422 VESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRI 481

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L N M  +G LP+ + YS L+  L     +DEAV +  QM +    P+V  Y+ +
Sbjct: 482 SNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIM 541

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+ K+  +  A  ++  M      P++V YT +   + ++         +  +   N 
Sbjct: 542 IDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINP 601

Query: 372 PPNTVTFNTFIKGLCGCGRVDW 393
           PP  +    ++  LC    +D+
Sbjct: 602 PPRVL---KYLAALCKSEHLDY 620



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 48/292 (16%)

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           F   G++  +  I+ +++  G   + VA   ++K LC N    +A    +++       N
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQY---------------------ECL------ 407
            V++   I GLC  GRV+ A+ LL  +++                      +CL      
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 408 ----------------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
                           PN  TY  L+ GL  V +  E F LV E+ + G+ +++  +  +
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVL 261

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G+C+ GM+VEA ++  +M+  G + + +T   ++  YC +G V+ A +L D I   GE
Sbjct: 262 IDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI---GE 318

Query: 512 W--NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           W    D+ +Y   + G C  G +++A     +M  EG+ PN  T+N L+  L
Sbjct: 319 WGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCL 370



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 106/241 (43%), Gaps = 28/241 (11%)

Query: 355 MFHQAH-----SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            FH  H     S+  K+       +TV  NT +KGLC  G V  A++  D++       N
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEI--------EKCGIQLNIVTYNTILHGVCRAGMV 461
             +Y  L++GL    RV EA  L+  I        +   ++ N+V Y+ ++  +CR G V
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYT 520
            E F+   +M+  G   +  T+  +I   C  GK      L+D  IR G   +  +  +T
Sbjct: 202 DEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRG--LDVSVYVFT 259

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV------------RSLFSNLGHL 568
            L+ G+C +G + EA     +M+N G  PN  T   L+            R LF  +G  
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 569 G 569
           G
Sbjct: 320 G 320


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 260/526 (49%), Gaps = 8/526 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           ++   + P +  YN I++ L  E R      +   M+    EPN FTY IL+  LCK  R
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNA 170
           V+ A +LL EM  KG   D V Y+T++S  C  G ++  +      L       V VY+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LING CK+    EA  +L  M +RGI P+V TY+ +I  LC  G    +L +   M  +G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             P+  ++  L+ G    G   +A  ++  M+ +G    VV+Y+TLI GLC+NG +DEA+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 291 SVSYQMEE--NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
            +   + E  N   P+V T++ +I G  K G L  A +I++ MI  G   N+     ++ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
              ++ +  +A  L +++      P++ T++  I G C    +++A  L  +MK     P
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            +  YN L+  L + + +++A  L  E+++   + + +++N ++ G  +AG +  A +LL
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M   G   DA T++  I    K G++  A    D +   G   PD   Y SL+ G   
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG-ITPDNHVYDSLIKGFGL 479

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +  ++E    L++M + G+  +    N ++  L ++  HL  + +L
Sbjct: 480 NDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 246/492 (50%), Gaps = 9/492 (1%)

Query: 21  MKVEGVSCSEGVFISVI--NSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +++EG SC    F   I  +   + G  E+A+++   ++  GL+  V +Y+ ++    ++
Sbjct: 34  VEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSK 93

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                   ++  M   G+ PNV  Y+ L+   CK      A  +L  M  +G  PD  +Y
Sbjct: 94  GCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTY 153

Query: 139 TTIVSSICKLGQVEEAR---ELAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVD 193
           T ++  +CK G+  +A    +L    G   S   YN LINGLCKE  I +AF +   M++
Sbjct: 154 TCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLE 213

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG--CNPNIHSFTSLLKGYLLGGRT 251
           +G    V++Y+T+I  LC+ G ++ ++ +   +   G    P++ +F ++++G    GR 
Sbjct: 214 KGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRL 273

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A ++++ MI  G   N+     LI     +G +D+A+ +  ++ +    P+ TTYS +
Sbjct: 274 DKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVM 333

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDGF K   L  A  +++RM  +G SP +  Y  ++  LC+ +   QA  L ++M   NC
Sbjct: 334 IDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNC 393

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+T++FN  I G    G +  A +LL+ M+Q    P+  TY+  ++ L ++ +++EA  
Sbjct: 394 EPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKG 453

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
               +   GI  +   Y++++ G      + E   LL +M   G  LD    N I+   C
Sbjct: 454 AFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513

Query: 492 KQGKVNNAIQLL 503
              +  + ++LL
Sbjct: 514 NSAEHLHVMELL 525



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 234/475 (49%), Gaps = 7/475 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++  ++    LL +MK +G+     V+ ++I+ +   G  ++   +F  + E G
Sbjct: 51  LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V +Y+ +++    +  +     +   M   G++P+V+TY  ++  LCK+ R   A 
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKAL 170

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGSGVSV--YNALINGL 175
            L   M  KG  P  V+Y  +++ +CK G + +A    E  +  G  + V  YN LI GL
Sbjct: 171 DLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230

Query: 176 CKEHKIEEAFWLLCEMVDRG--IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           C   K++EA  L   +++ G  ++P+VIT++T+I  LC  G ++ ++ I   M  RG   
Sbjct: 231 CNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG 290

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N+ +   L+  Y+  G   +A +LW R+ + G +P+   YS +I G C    ++ A  + 
Sbjct: 291 NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+ +   P +  Y+ L+    K  +L  A +++  M  + C P+ +++  M+    + 
Sbjct: 351 SRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H A  L+  M      P+  T+++FI  L   G+++ A    D M      P+   Y
Sbjct: 411 GDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVY 470

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           + L+ G    + ++E   L+ ++   G+ L++   N+IL  +C +   +   +LL
Sbjct: 471 DSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 33/166 (19%), Positives = 69/166 (41%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++  ++  + L Q+MK          F  +I+   + G    A ++   +++ G
Sbjct: 368 LMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    Y+  ++ L    +       + +M   G+ P+   Y+ L+K    N+ ++   
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVI 487

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
            LL +M + G   D     +I++ +C   +     EL   F S  S
Sbjct: 488 NLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESS 533


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 152/560 (27%), Positives = 265/560 (47%), Gaps = 55/560 (9%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + I  + ++RR+  AE+ L     ++E G    V  +N ++     + R +    +    
Sbjct: 115 ILIKKLCAHRRLADAERVLDA---LKESGSADAVS-HNTLVAGYCRDGRLADAERVLEAA 170

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K  G   NV TY  L+   C++ R+  A  L+  M     APD  +Y T++  +C   Q 
Sbjct: 171 KVSGAA-NVVTYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQW 226

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E+A EL               +   I   C+   ++ A  LL  M   G  P+V+ YST+
Sbjct: 227 EKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTL 286

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++   + G V+ +L +L  M    C PN   + + LKG  +  R  +  +L   M+R+  
Sbjct: 287 VNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDC 343

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN   +S L   LC +G +D A+ V  QM++  C P+V  Y+ LI+ F++ G +  A  
Sbjct: 344 PPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALM 403

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + + M+   C+P+ +++   +K LC+   ++    LI +M  E+CP   +TFN  I  LC
Sbjct: 404 LLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLC 460

Query: 387 GCGRVDWAMKLLDQMKQYECLPNIT--------------------------------TYN 414
             G V+ A+++ +QM +Y C P+I                                 +YN
Sbjct: 461 QHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDIFSYN 520

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            +L GL R  R ++A EL+  + +     N +T+N +++ +C+ G    A ++  +M   
Sbjct: 521 AVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEY 580

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G+  D  T+N +I  + +QG++++A+ LL  +       PD ISY S L G+C +   +E
Sbjct: 581 GSTPDIFTYNALINGFSEQGRLDDALNLLSTM----SCKPDAISYNSTLKGLCRAERWKE 636

Query: 535 AFIYLQKMLNEGICPNFATW 554
           A   + +ML +   PN  T+
Sbjct: 637 AEEIVAEMLRKKCPPNEVTF 656



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 232/464 (50%), Gaps = 45/464 (9%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P V   NIL+K LC + R+  A ++L  +   G A DAVS+ T+V+  C+ G++ +    
Sbjct: 108 PAVIACNILIKKLCAHRRLADAERVLDALKESGSA-DAVSHNTLVAGYCRDGRLAD---- 162

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           A R      V  A                            NV+TY+ +I+  C  G + 
Sbjct: 163 AERVLEAAKVSGAA---------------------------NVVTYTALINGYCRSGRLA 195

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L ++  M V    P+ +++ ++LKG     +  +A +L   MIR    PN V ++T I
Sbjct: 196 DALNLIASMPV---APDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQI 252

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C NG +D AV +  +M    C P+V  YS L++GF++ G +  A  + N M+   C 
Sbjct: 253 RSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CK 309

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PN V Y   +K LC    +     LI +M  ++CPPN  TF+     LC  G VD AM++
Sbjct: 310 PNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEV 369

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           ++QM++Y C P++  YN L++      RV +A  L+  +       + +++N  L  +CR
Sbjct: 370 VEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCR 426

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
                +  +L+ +ML E   L  +TFNI+I + C+ G VN+AI++ +++       PDI+
Sbjct: 427 TERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQM-PKYRCTPDIV 485

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +Y+SL+ G    G ++ A    Q M  +   P+  ++N +++ L
Sbjct: 486 TYSSLINGFSEQGLVESAIELFQSMPCK---PDIFSYNAVLKGL 526



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 90/174 (51%), Gaps = 7/174 (4%)

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A++L+  M   E  P +   N L+  L    R+ +A  ++  +++ G   + V++NT
Sbjct: 92  LDAALRLVGSMPSSE-PPAVIACNILIKKLCAHRRLADAERVLDALKESG-SADAVSHNT 149

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G CR G + +A ++L    + G   + +T+  +I  YC+ G++ +A+ L+  +    
Sbjct: 150 LVAGYCRDGRLADAERVLEAAKVSGAA-NVVTYTALINGYCRSGRLADALNLIASMPVA- 207

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              PD  +Y ++L G+C +   ++A   +++M+     PN  T+   +RS   N
Sbjct: 208 ---PDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQN 258


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/599 (24%), Positives = 290/599 (48%), Gaps = 42/599 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG++  +     L   ++ +G S     + S+I+++   G   +A+ +F ++ E G
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238

Query: 61  LKPTVKIYNHILDAL-LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            KPT+  YN IL+        ++ I  +   MK DG+ P+ +TYN L+    + +    A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALING 174
            ++  EM   G + D V+Y  ++    K  + +EA     E+ +  F   +  YN+LI+ 
Sbjct: 299 AQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISA 358

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             ++  ++EA  L  +M ++G  P+V TY+T++S     G VE+++ I  +M   GC PN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPN 418

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +F + +K Y   G+  +   +++ +   G  P++V ++TL+     NG   E   V  
Sbjct: 419 ICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P   T++ LI  +++ G+   A  ++ RM+  G +P++  Y  ++  L +  
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG--------------------------- 387
           M+ Q+  ++ +M    C PN +T+ + +                                
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 388 -----CGRVDW---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
                C + D    A +   ++K+    P+ITT N ++    R   V +A E++  +++ 
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKER 658

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   ++ TYN++++   R+    ++ ++L ++L +G K D I++N +IYAYC+  ++ +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            ++   +R  G   PD+I+Y + +         +EA   ++ M+  G  PN  T+N +V
Sbjct: 719 SRIFSEMRDSG-IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 134/581 (23%), Positives = 264/581 (45%), Gaps = 48/581 (8%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           K E  S     F+  +  +++  LA  A   F + +++       +   ++  L  E R 
Sbjct: 130 KPESTSSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRV 189

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
           S    +++ ++ DG   +V++Y  L+ A   + R   A  +  +M  +GC P  ++Y  I
Sbjct: 190 SSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVI 249

Query: 142 VSSICKLGQ--------VEEARELAMRFGSGVSVYNALINGLCKEHKI-EEAFWLLCEMV 192
           ++   K+G         VE+ +   +        YN LI   CK   + +EA  +  EM 
Sbjct: 250 LNVFGKMGTPWNKITSLVEKMKSDGI--APDAYTYNTLIT-CCKRGSLHQEAAQVFEEMK 306

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G   + +TY+ ++         + ++ +L +M + G +P+I ++ SL+  Y   G   
Sbjct: 307 AAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLD 366

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA +L N+M  +G  P+V  Y+TL+ G    G ++ A+++  +M    C PN+ T++A I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFI 426

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             +   G  +   +I++ +   G SP++V +  ++ V  QN M  +   + ++M      
Sbjct: 427 KMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P   TFNT I     CG  + AM +  +M      P+++TYN +L  L R    +++ ++
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546

Query: 433 VTEIEKCGIQLNIVTYNTILHG----------------------------------VC-R 457
           + E+E    + N +TY ++LH                                   VC +
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
             ++ EA +   ++   G   D  T N ++  Y ++  V  A ++LD ++  G + P + 
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERG-FTPSMA 665

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +Y SL++    S    ++   L+++L +GI P+  ++N ++
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/534 (22%), Positives = 241/534 (45%), Gaps = 40/534 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +  L+++MK +G++     + ++I   +R  L ++A ++F  ++  G       YN +LD
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLD 322

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                +R      + + M+ +G  P++ TYN L+ A  ++  +D A +L  +M  KG  P
Sbjct: 323 VYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKIEEAFWLL 188
           D  +YTT++S   + G+VE A  +   MR       +  +NA I       K  +   + 
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIF 442

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E+   G+ P+++T++T+++     G      G+  +M   G  P   +F +L+  Y   
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A  ++ RM+  G  P++  Y+T++  L   G  +++  V  +ME+  C PN  TY
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562

Query: 309 SALIDGFA-----------------------------------KAGNLLGASQIWNRMIS 333
            +L+  +A                                   K   L  A + ++ +  
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G SP++     MV +  +  M  +A+ +++ M      P+  T+N+ +           
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           + ++L ++      P+I +YN ++    R  R+++A  + +E+   GI  +++TYNT + 
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIG 742

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
                 M  EA  ++  M+  G + +  T+N I+  YCK  + + A   ++ +R
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 3/321 (0%)

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR   A++L+N +  +GF  +V +Y++LI    ++G   EAV+V  +MEE  C P + TY
Sbjct: 187 GRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITY 246

Query: 309 SALIDGFAKAGNLLGA-SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           + +++ F K G      + +  +M S+G +P+   Y  ++    + ++  +A  + E+M 
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                 + VT+N  +       R   AMK+L++M+     P+I TYN L+    R   + 
Sbjct: 307 AAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLD 366

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA EL  ++ + G + ++ TY T+L G  RAG V  A  +  +M   G K +  TFN  I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFI 426

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             Y  +GK  + +++ D I   G  +PDI+++ +LL     +G   E     ++M   G 
Sbjct: 427 KMYGNRGKFVDMMKIFDEINVCG-LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485

Query: 548 CPNFATWNVLVRSLFSNLGHL 568
            P   T+N L+ S +S  G  
Sbjct: 486 VPERETFNTLI-SAYSRCGSF 505



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 193/435 (44%), Gaps = 46/435 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L  QM  +G       + ++++ + R G  E A+ +F  +R  G KP +  +N 
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNA 424

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMG 127
            +       +F  +  I+  +   G+ P++ T+N LL    +N   + V G +K   EM 
Sbjct: 425 FIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK---EMK 481

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGV----SVYNALINGLCKEHKIE 182
             G  P+  ++ T++S+  + G  E+A  +  R   +GV    S YN ++  L +    E
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCD---------------VGNVETSLGILGQMF 227
           ++  +L EM D    PN +TY +++ +  +                G +E    +L  + 
Sbjct: 542 QSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLV 601

Query: 228 V--------------------RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
           +                    RG +P+I +  S++  Y       +A+++ + M   GF 
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFT 661

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P++  Y++L++    +    ++  +  ++      P++ +Y+ +I  + +   +  AS+I
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRI 721

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M  +G  P+V+ Y   +     ++MF +A  ++  M    C PN  T+N+ + G C 
Sbjct: 722 FSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781

Query: 388 CGRVDWAMKLLDQMK 402
             R D A   ++ ++
Sbjct: 782 LNRKDEAKLFVEDLR 796



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/371 (21%), Positives = 171/371 (46%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I+  G + +   +  +  ++ V G+S     + +++  + + G+  +   +F  ++  G
Sbjct: 425 FIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + +N ++ A      F     +Y  M   G+ P++ TYN +L AL +    + + 
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGL 175
           K+L EM +  C P+ ++Y +++ +     ++     LA    SGV      +   L+   
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   + EA     E+ +RG  P++ T ++++S       V  +  +L  M  RG  P++
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSM 664

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+  +       ++ ++   ++ +G  P++++Y+T+I+  C N  M +A  +  +
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M ++   P+V TY+  I  +A       A  +   MI +GC PN   Y  +V   C+ N 
Sbjct: 725 MRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784

Query: 356 FHQAHSLIEKM 366
             +A   +E +
Sbjct: 785 KDEAKLFVEDL 795



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 139/270 (51%), Gaps = 6/270 (2%)

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I    K G +  A+ ++N +  +G S +V +YT ++     +  + +A ++ +KM  E 
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238

Query: 371 CPPNTVTFNTFIKGLCGCGRVDW--AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           C P  +T+N  +      G   W     L+++MK     P+  TYN L+    R +  +E
Sbjct: 239 CKPTLITYNVILNVFGKMG-TPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A ++  E++  G   + VTYN +L    ++    EA ++L +M + G     +T+N +I 
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLIS 357

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           AY + G ++ A++L +++   G   PD+ +YT+LL G   +G ++ A    ++M N G  
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGT-KPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCK 416

Query: 549 PNFATWNVLVRSLFSNLGH-LGPVYILDDI 577
           PN  T+N  ++ ++ N G  +  + I D+I
Sbjct: 417 PNICTFNAFIK-MYGNRGKFVDMMKIFDEI 445


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 259/524 (49%), Gaps = 7/524 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  MK  G+  +   +  ++    + G   +AL+++  +   G+ P+V+ Y+ ++ A   
Sbjct: 273 LPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGK 332

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G++PNV++Y I ++ L +  R D AY++L +M N+GC PD ++
Sbjct: 333 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVIT 392

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
           +T ++  +C  G++ +A+++  +            Y  L++        +    +   M 
Sbjct: 393 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 452

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + NV+ Y+ +I +LC VG V  +L +  +M  +G  P  +S+ SL+ G+L   R  
Sbjct: 453 ADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFG 512

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A +L+  M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 513 DALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVL 572

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G AK+G L  A ++++ + + G SP+ + YT M+K   + + F +A  +   M   NC 
Sbjct: 573 FGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCV 632

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   GR D A ++  Q+K+    P   TYN LL GL R  +VKE   L
Sbjct: 633 PDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHL 692

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+       N++TYNTIL  +C+ G V +A  +L  M  +G   D  ++N +IY   K
Sbjct: 693 LEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVK 752

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + + N A  +  +++      PD  +  ++L      G M+EA 
Sbjct: 753 EERYNEAFSIFCQMK--KVLIPDYATLCTILPSFVKIGLMKEAL 794



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 278/586 (47%), Gaps = 43/586 (7%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L + M + G   +    +  IN Y + G + +A++ +  ++  G+ P V   N +L  L 
Sbjct: 517  LFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLA 576

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               R  M   ++  +K  G+ P+  TY +++K   K ++ D A K+  +M    C PD +
Sbjct: 577  KSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVL 636

Query: 137  SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            +  +++ ++ K G+ +EA  +      M        YN L+ GL +E K++E   LL EM
Sbjct: 637  AVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 696

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                  PN+ITY+TI+  LC  G V  +L +L  M  +GC P++ S+ +++ G +   R 
Sbjct: 697  YHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERY 756

Query: 252  HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTTYS 309
            +EA  ++ +M ++  +P+     T++      G M EA+ +   Y ++  S     + +S
Sbjct: 757  NEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHS 815

Query: 310  ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
             L++G  K   +  + +    + S+G + +      ++K LC+     +AH L++K    
Sbjct: 816  -LMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSF 874

Query: 370  NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
                 T  +N+ I GL     +D A  L  +MK+  C P+  TYN LLD + +  R++E 
Sbjct: 875  GVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEM 934

Query: 430  FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             ++  E+ + G +   VTYNTI+ G+ ++  + +A  L   ++ +G      T+  ++  
Sbjct: 935  LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 994

Query: 490  YCKQGKVNNAIQLLD---------------------RIRGGGEW-------------NPD 515
              K G++ +A  L +                     RI G  E              NPD
Sbjct: 995  LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1054

Query: 516  IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            I SYT ++  +C +G + +   Y +++L  G+ P+  T+N+L+  L
Sbjct: 1055 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1100



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 143/528 (27%), Positives = 240/528 (45%), Gaps = 33/528 (6%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I++  + G  ++A ++FY+++E  L+PT   YN +L  L  E +   +  +   M   
Sbjct: 640  SLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHS 699

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
               PN+ TYN +L  LCKN  V+ A  +L  M  KGC PD                    
Sbjct: 700  NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPD-------------------- 739

Query: 155  RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                      +S YN +I GL KE +  EAF + C+M  + + P+  T  TI+ S   +G
Sbjct: 740  ----------LSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIG 788

Query: 215  NVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             ++ +L I+   F++ G   +  S  SL++G L      ++ +    +   G   +    
Sbjct: 789  LMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFL 848

Query: 274  STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
              LI  LC      EA  +  + +          Y++LI G      +  A  ++  M  
Sbjct: 849  CPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKE 908

Query: 334  NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             GC P+   Y  ++  + ++    +   + E+M  +      VT+NT I GL    R++ 
Sbjct: 909  LGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQ 968

Query: 394  AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
            A+ L   +      P   TY  LLDGLL+  R+++A  L  E+ + G + N   YN +L+
Sbjct: 969  AIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLN 1028

Query: 454  GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            G   AG   +   L   M+ +G   D  ++ III   CK G++N+ +    ++   G   
Sbjct: 1029 GHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMG-LE 1087

Query: 514  PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            PD+I+Y  L+ G+  S  ++EA     +M  +GI PN  T+N L+  L
Sbjct: 1088 PDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHL 1135



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/515 (23%), Positives = 239/515 (46%), Gaps = 40/515 (7%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG + ++  V +LL++M       +   + ++++   + G    AL M Y +   G
Sbjct: 676  LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 735

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKR--------------------------- 93
              P +  YN ++  L+ E R++    I+  MK+                           
Sbjct: 736  CIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALH 795

Query: 94   --------DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                     G + +  + + L++ + K   ++ + +    + + G   D      ++  +
Sbjct: 796  IIKDYFLQPGSKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHL 855

Query: 146  CKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            CK  +  EA EL  +F S GVS+    YN+LI GL  E+ I+ A  L  EM + G  P+ 
Sbjct: 856  CKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDE 915

Query: 201  ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             TY+ ++ ++     +E  L +  +M  +G      ++ +++ G +   R  +A DL+  
Sbjct: 916  FTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYN 975

Query: 261  MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
            ++ +GF P    Y  L+ GL   G +++A ++  +M E  C  N T Y+ L++G   AGN
Sbjct: 976  LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 1035

Query: 321  LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
                  ++  M+  G +P++ +YT ++  LC+    +   +   ++      P+ +T+N 
Sbjct: 1036 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1095

Query: 381  FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
             I GL    R++ A+ L ++M++   +PN+ TYN L+  L +  +  EA ++  E+   G
Sbjct: 1096 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1155

Query: 441  IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
             + N+ TYN ++ G   +G    A+   G+M++ G
Sbjct: 1156 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1190



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 236/541 (43%), Gaps = 17/541 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKP----TVKIYNHILDALLAENRFSMINPIYSN 90
            VI++ R      +AL+   R R    KP    T    N++L+ +    R   +  ++  
Sbjct: 184 DVIHALRSADGPAEALE---RFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAEVFDV 240

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+R  ++ NV T+  +   L     +  A   L  M   G   +A +Y  +V  + K G 
Sbjct: 241 MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 300

Query: 151 VEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA E+    M  G    V  Y+ L+    K   +E   WLL EM   G+ PNV +Y+ 
Sbjct: 301 DREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 360

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
            I  L      + +  IL +M   GC P++ + T L++     GR  +A D++ +M +  
Sbjct: 361 CIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 420

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+ V Y TL+     NG     + +   M+ +    NV  Y+A+ID   + G +  A 
Sbjct: 421 QKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 480

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++++ M   G  P   +Y  ++    + + F  A  L + M      PN  T   FI   
Sbjct: 481 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY 540

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G    A++  + MK    +P++   N +L GL +  R+  A  +  E++  G+  + 
Sbjct: 541 GKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 600

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TY  ++    +A    EA ++   M+      D +  N +I    K G+ + A ++  +
Sbjct: 601 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 660

Query: 506 IRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           ++   E N  P   +Y +LL G+   G ++E    L++M +    PN  T+N ++  L  
Sbjct: 661 LK---EMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCK 717

Query: 564 N 564
           N
Sbjct: 718 N 718



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 5/312 (1%)

Query: 103  YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE---ARELAM 159
            YN L+  L   N +D A  L  EM   GC PD  +Y  ++ ++ K  ++EE    +E   
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942

Query: 160  RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            R G  S    YN +I+GL K  ++E+A  L   ++ +G  P   TY  ++  L   G +E
Sbjct: 943  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 1002

Query: 218  TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
             +  +  +M   GC  N   +  LL G+ + G T +   L+  M+ +G  P++ +Y+ +I
Sbjct: 1003 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1062

Query: 278  HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              LC  G +++ ++   Q+ E    P++ TY+ LIDG  K+  L  A  ++N M   G  
Sbjct: 1063 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122

Query: 338  PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            PN+  Y  ++  L +     +A  + E++  +   PN  T+N  I+G    G  D A   
Sbjct: 1123 PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAA 1182

Query: 398  LDQMKQYECLPN 409
              +M    CLPN
Sbjct: 1183 YGRMIVGGCLPN 1194



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/570 (21%), Positives = 255/570 (44%), Gaps = 8/570 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I   + +  +MK          +I++++ +   G ++  ++++  ++  G
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  ++DAL    R      ++  MK+ G+ P  ++YN L+    K +R   A 
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
           +L   M   G  P+  ++   ++   K G+  +A    EL    G    V   NA++ GL
Sbjct: 516 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 575

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  ++  A  +  E+   G+ P+ ITY+ +I         + ++ I   M    C P++
Sbjct: 576 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 635

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +  SL+      GR  EA  ++ ++      P    Y+TL+ GL   G + E + +  +
Sbjct: 636 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 695

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  ++ PPN+ TY+ ++D   K G +  A  +   M + GC P++ +Y  ++  L +   
Sbjct: 696 MYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEER 755

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPNITTYN 414
           +++A S+  +M  +   P+  T  T +      G +  A+ ++ D   Q     + ++ +
Sbjct: 756 YNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCH 814

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L++G+L+   ++++ E    I   GI L+      ++  +C+    +EA +L+ K    
Sbjct: 815 SLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSF 874

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G  L    +N +I     +  ++ A  L   ++  G   PD  +Y  LL  +  S  ++E
Sbjct: 875 GVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELG-CGPDEFTYNLLLDAMGKSMRIEE 933

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
                ++M  +G    + T+N ++  L  +
Sbjct: 934 MLKVQEEMHRKGYESTYVTYNTIISGLVKS 963



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 153/328 (46%), Gaps = 40/328 (12%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            L+++ K  GVS   G++ S+I       L + A  +F  ++E G  P    YN +LDA+ 
Sbjct: 867  LVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 926

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               R   +  +   M R G E    TYN ++  L K+ R++ A  L   + ++G +P   
Sbjct: 927  KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 986

Query: 137  SYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALING----------------- 174
            +Y  ++  + K G++E+A  L    + +G  +  ++YN L+NG                 
Sbjct: 987  TYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 1046

Query: 175  ------------------LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                              LCK  ++ +      ++++ G++P++ITY+ +I  L     +
Sbjct: 1047 VDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRL 1106

Query: 217  ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            E ++ +  +M  +G  PN++++ SL+      G+  EA  ++  ++ +G+ PNV  Y+ L
Sbjct: 1107 EEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNAL 1166

Query: 277  IHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            I G   +GS D A +   +M    C PN
Sbjct: 1167 IRGYSVSGSTDSAYAAYGRMIVGGCLPN 1194



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 9/267 (3%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +++ L +   I+  + L  +M   G   +  ++  ++N +R  G  E+   +F  + + G
Sbjct: 991  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1050

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            + P +K Y  I+D L    + +     +  +   G+EP++ TYN+L+  L K+ R++ A 
Sbjct: 1051 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 1110

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
             L  EM  KG  P+  +Y +++  + K G+  EA +     L   +   V  YNALI G 
Sbjct: 1111 SLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGY 1170

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                  + A+     M+  G  PN  T S+  SS   VG V   +    + +     P  
Sbjct: 1171 SVSGSTDSAYAAYGRMIVGGCLPNSSTDSSNCSSPEAVGTVRKQI-TSHRSYHNAKEPTT 1229

Query: 236  HSFTSLLKGYL---LGGRTHEASDLWN 259
             ++  L KG L     G   + +D W 
Sbjct: 1230 KAWRWLSKGCLRRAAAGNAQQIADGWR 1256


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 136/441 (30%), Positives = 223/441 (50%), Gaps = 38/441 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI KL    E    + +L +MK E    +E +F+S+   Y RV +   A+++F+++ +FG
Sbjct: 56  MISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFG 115

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN-RVDGA 119
            KPT K Y  +   L+ EN+  +    Y  M+  G+  +V + N+L+KALCKN+  +D A
Sbjct: 116 CKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAA 175

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
           +++  EM  +GC PD+ +Y T                              LINGLCK  
Sbjct: 176 FEIFREMPKRGCDPDSYTYGT------------------------------LINGLCKLG 205

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K  EA  L  EM  +G  P+V+TYS ++  LC  GNV+ ++G+  +M  +   PN+ +++
Sbjct: 206 KTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYS 265

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL+ G    G + EA +L   M+R+   PN+V YSTLI+GLC  G + EAV    +M+  
Sbjct: 266 SLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV-------LCQ 352
              P+   Y  +I+GF        A+   + M+    SPN V ++  VK+       LC 
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCT 385

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           N   +++  L   M       +  TF++ +K  C  G +  A ++ D+M    C+P+   
Sbjct: 386 NGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGI 445

Query: 413 YNELLDGLLRVNRVKEAFELV 433
           ++ ++ G     +V+EAFE +
Sbjct: 446 WSAVVGGFWDRRKVREAFESI 466



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 224/466 (48%), Gaps = 47/466 (10%)

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           F   +  YSN    G   +  T+ +++  L   N    A ++L  M  + C      + +
Sbjct: 35  FDSASAEYSN----GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLS 90

Query: 141 IVSSICKLGQVEEARELAMR---FG------SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           I     ++    +A  +  +   FG      S +SV+  L+    +E++++ A      M
Sbjct: 91  ICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILV----EENQLKVAMSFYKYM 146

Query: 192 VDRGIDPNVITYSTIISSLC-DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
            + G+  +V++ + +I +LC + G ++ +  I  +M  RGC+P+ +++ +L+ G    G+
Sbjct: 147 REMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGK 206

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
           T EA +L+  M  +G  P+VV YS L+HGLC  G++DEA+ +  +M++ +  PNV TYS+
Sbjct: 207 TFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSS 266

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+DG  K G  L A ++   M+     PN+V Y+ ++  LC+     +A   +++M  + 
Sbjct: 267 LMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQG 326

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+   +   I G C   +   A   LD+M   +  PN  T++                
Sbjct: 327 LKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWS---------------- 370

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
                       L++   N ++ G+C  G +  +FQL   M   G  +DA TF+ ++  +
Sbjct: 371 ------------LHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCF 418

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           CK+G ++ A ++ D +   G   PD   +++++ G  +   ++EAF
Sbjct: 419 CKKGDLHKAARIFDEMVLDG-CVPDHGIWSAVVGGFWDRRKVREAF 463



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 184/376 (48%), Gaps = 15/376 (3%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH-- 252
           G   +  T+  +IS L        +  +L +M    C      F S+ +GY   GR H  
Sbjct: 45  GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGY---GRVHMP 101

Query: 253 -EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++++M   G  P   +Y ++   L     +  A+S    M E     +V + + L
Sbjct: 102 LDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVL 161

Query: 312 IDGFAK-AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           I    K +G +  A +I+  M   GC P+   Y  ++  LC+     +A  L ++M  + 
Sbjct: 162 IKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKG 221

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C P+ VT++  + GLC  G VD AM L D+MK+    PN+ TY+ L+DGL +     EA 
Sbjct: 222 CSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAM 281

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           EL+  + +   + N+VTY+T+++G+C+ G + EA + L +M ++G K DA  +  II  +
Sbjct: 282 ELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGF 341

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYT-------SLLWGICNSGGMQEAFIYLQKML 543
           C   K   A   LD +   G+ +P+ ++++        ++ G+C +G +  +F     M 
Sbjct: 342 CNIRKFQEAATYLDEMV-LGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMR 400

Query: 544 NEGICPNFATWNVLVR 559
             GI  +  T++ LV+
Sbjct: 401 TRGISIDAGTFDSLVK 416



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 131/298 (43%), Gaps = 37/298 (12%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  +   +  +I  L S      A  +  +M+E  C      + ++  G+ +    L A
Sbjct: 45  GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDA 104

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++++M   GC P   +Y  +  +L + N    A S  + M       + V+ N  IK 
Sbjct: 105 IRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKA 164

Query: 385 LC-GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           LC   G +D                                    AFE+  E+ K G   
Sbjct: 165 LCKNSGTID-----------------------------------AAFEIFREMPKRGCDP 189

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +  TY T+++G+C+ G   EA +L  +M  +G     +T++ +++  C+ G V+ A+ L 
Sbjct: 190 DSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLF 249

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D+++      P++ +Y+SL+ G+C +GG  EA   L+ M+ +   PN  T++ L+  L
Sbjct: 250 DKMKKKA-IEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGL 306



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 120/247 (48%), Gaps = 8/247 (3%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           SNG   +   +  M+  L   N F  A  ++ +M  E C    +T   F+    G GRV 
Sbjct: 43  SNGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKC---RITEEIFLSICRGYGRVH 99

Query: 393 W---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
               A+++  +M  + C P   +Y  +   L+  N++K A      + + G++ ++V+ N
Sbjct: 100 MPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLN 159

Query: 450 TILHGVCR-AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
            ++  +C+ +G +  AF++  +M   G   D+ T+  +I   CK GK   A +L   +  
Sbjct: 160 VLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDT 219

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G  +P +++Y+ L+ G+C +G + EA     KM  + I PN  T++ L+  L  N G L
Sbjct: 220 KG-CSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSL 278

Query: 569 GPVYILD 575
             + +L+
Sbjct: 279 EAMELLE 285


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 243/487 (49%), Gaps = 7/487 (1%)

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
           R + +   +  M + G  PN  TYN L+ A CK   +  A   LV M   G APD  +Y 
Sbjct: 70  RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYN 129

Query: 140 TIVSSICKLGQVEEA----RELAMRFGSGVSVYN--ALINGLCKEHKIEEAFWLLCEMVD 193
            ++  +C+ G +  A     ++  R+G+    Y+   LI GLC   +I++A  +  +M  
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSR 189

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
               P V TY+ ++  LC V  V  +  +LG+M  +G  PN+ ++ +L+ G    GR  +
Sbjct: 190 GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDD 249

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
            + L  +M  +   P+   Y+ ++HGLC +G +     V ++         V TY+ALI+
Sbjct: 250 VTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALIN 309

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G+ K G++  A  +   M  N  +P V  +  ++   C     H+A + + +MA     P
Sbjct: 310 GYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSP 369

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           NTVTFN+ I G C  G    A++LLD M++Y  LP+  TY   +D L    +++EA  L 
Sbjct: 370 NTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF 429

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           + +   GI+ + V Y +++HG C+ G +  AF L+ KM  E    D  T+N +I   CK 
Sbjct: 430 SCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKV 489

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            +++ AI LLD+++  G   P   ++  L+  +       +A    ++M++ G  P+  T
Sbjct: 490 KRLDRAIDLLDKMKKQG-IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQT 548

Query: 554 WNVLVRS 560
           + + + +
Sbjct: 549 YTLKIST 555



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 161/563 (28%), Positives = 255/563 (45%), Gaps = 58/563 (10%)

Query: 42  RVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           R GL   A  +F ++ R +G       Y  ++  L A  R      +++ M R    P V
Sbjct: 137 RAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGV 196

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--- 157
            TY +LL  LCK  RV  A  LL EM NKG  P+ V+Y  ++  +C+ G+ ++  +L   
Sbjct: 197 HTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEK 256

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
               R       Y  +++GLCK  K+     +L E + +G+   V+TY+ +I+  C  G+
Sbjct: 257 MEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGD 316

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ +L +L  M     NP + +F  ++ G+  GG+ H+A     +M   G  PN V +++
Sbjct: 317 MKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNS 376

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI G CS G    A+ +   MEE    P+  TY+  ID     G L  A  +++ +   G
Sbjct: 377 LISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKG 436

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
              + V YT +V   CQ      A  L+EKMA ENC P+  T+NT I GLC   R+D A+
Sbjct: 437 IKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAI 496

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL----------------------- 432
            LLD+MK+    P   T+N L+  +L   +  +A ++                       
Sbjct: 497 DLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTD 556

Query: 433 --------------VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
                         V E+ + G+  ++ TYN I+     AG+  +AF    KML      
Sbjct: 557 WFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDP 616

Query: 479 DAITFNIIIYAYC--------------KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           D  T++I++   C              K   V N  +L +++    +  P I +Y +LL 
Sbjct: 617 DCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQM-CESDAAPGISTYKALLR 675

Query: 525 GICNSGGMQEAFIYLQKMLNEGI 547
           G+CN   ++E    L KM    I
Sbjct: 676 GLCNQCRLEEVEWLLLKMQGNSI 698



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 152/609 (24%), Positives = 251/609 (41%), Gaps = 67/609 (11%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V +  +   RRVG AE  L     +   G+ P V  YN ++  L  E RF  +  +   M
Sbjct: 201 VLLDGLCKVRRVGEAEALLG---EMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +     P+ +TY  ++  LCK+ +V    K+L E   KG A + ++Y  +++  CK G +
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 152 EEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A ++       R   GV  +N +I+G C   K+ +A   L +M   G+ PN +T++++
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           IS  C VG  + +L +L  M   G  P+  ++   +      G+  EA  L++ +  +G 
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             + V Y++L+HG C  G +D A  +  +M   +C P+V TY+ LIDG  K   L  A  
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF-------- 378
           + ++M   G  P    +  ++K +  +     A  + E+M    C P+  T+        
Sbjct: 498 LLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDW 557

Query: 379 -----------------------------NTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
                                        N  IK     G  + A     +M      P+
Sbjct: 558 FEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPD 617

Query: 410 ITTYNELLD-----------------GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            TTY+ LL+                  ++ V  ++E FE + E +       I TY  +L
Sbjct: 618 CTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAP---GISTYKALL 674

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C    + E   LL KM      LD    + ++  YC       A +   R      +
Sbjct: 675 RGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQF-RSMAHQSF 733

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P + S   LL G+C+SG    A      ML  G   +   W +L+  L    GH G   
Sbjct: 734 QPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEK-GHAGACL 792

Query: 573 ILDDIMANK 581
            +  +M  K
Sbjct: 793 EMLSVMDAK 801



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 222/511 (43%), Gaps = 27/511 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +   +GV+     + ++IN Y + G  + AL +   ++   + P V+ +N ++    
Sbjct: 288 VLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFC 347

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +        + M   G+ PN  T+N L+   C       A +LL  M   G  PD  
Sbjct: 348 CGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQ 407

Query: 137 SYTTIVSSICKLGQVEEAREL----AMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y   + ++C  GQ+EEA  L     M+   +   +Y +L++G C+   I+ AF L+ +M
Sbjct: 408 TYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM 467

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 P+V TY+T+I  LC V  ++ ++ +L +M  +G  P   +F  L+K  L   + 
Sbjct: 468 ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKH 527

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLI-----HGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
            +A+ ++ +MI  G  P+   Y+  I      G     ++D AV    +M E    P+V 
Sbjct: 528 ADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAV---VEMHEAGVFPDVE 584

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM----------- 355
           TY+A+I  +  AG    A     +M+S    P+   Y+ ++  +C  +            
Sbjct: 585 TYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWK 644

Query: 356 ---FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                    L E+M   +  P   T+   ++GLC   R++    LL +M+    L +   
Sbjct: 645 MVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDM 704

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
            + LL     +   +EA E    +     Q  + +   +L G+C +G    A  +   ML
Sbjct: 705 SDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDML 764

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
             G   D + + ++I    ++G     +++L
Sbjct: 765 GLGYNYDEVVWKLLIDCLHEKGHAGACLEML 795



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/406 (22%), Positives = 173/406 (42%), Gaps = 27/406 (6%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I+ L ++ +++    L   + ++G+     ++ S+++ Y +VG  + A  +  ++     
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P V  YN ++D L    R      +   MK+ G+EP   T+NIL+K +  + +   A K
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQV-EEARELAM------RFGSGVSVYNALING 174
           +  +M + GC PD  +YT  +S+    G   EE  ++A+           V  YNA+I  
Sbjct: 533 MYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKA 592

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC-----------------DVGNVE 217
                  E+AF+   +M+   IDP+  TYS +++ +C                 DV N++
Sbjct: 593 YVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQ 652

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
               +  QM      P I ++ +LL+G     R  E   L  +M     L +      L+
Sbjct: 653 E---LFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLL 709

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C+     EA      M   S  P + +   L+ G   +G+   A  I++ M+  G +
Sbjct: 710 GCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYN 769

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
            + V +  ++  L +         ++  M  + C  +T T+ + ++
Sbjct: 770 YDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVR 815


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 257/518 (49%), Gaps = 21/518 (4%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++ +L      +      S M R G  P+ +T+N L+   C+ N+VD A  L  +M 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS----GVSVYNALINGLCKEHKIEE 183
            +G A D VSY  ++   C+ G+++EA EL   FG      + +Y AL+ GLCK  + EE
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVEL---FGEMDQPDMHMYAALVKGLCKAGRGEE 130

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              +L  M + G  P+   Y+ ++   C     + +  +L +MF +G  P + + T+++ 
Sbjct: 131 GLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVIN 190

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            Y   GR  +A  +   M   G  PNV  Y+ L+ G C+ G + +A+++  +M      P
Sbjct: 191 AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNP 250

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY+ LI G    G++  A ++   M  +G   +   Y  ++  LC++    QA SL 
Sbjct: 251 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 310

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           + +      PN VTFN+ I GLC  G+VD A K L++M    C P+  TY+  ++ L ++
Sbjct: 311 DSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 370

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA---GMVVEAFQLLGKMLIEGTKLDA 480
              +E    + E+ +  ++ + V Y  ++H + +    G+V   +   G+M+  G   D 
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTW---GEMVSSGCNPDV 427

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+   + AYC +G++N A  +L  +   G    D ++Y +L+ G  + G    A   L+
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGV-TVDTMAYNTLMDGHASIGQTDHAVSILK 486

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           +M +    PN  T+ +L+R       HL  + +++D++
Sbjct: 487 QMTSVASVPNQFTYFILLR-------HLVRMRLVEDVL 517



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 154/589 (26%), Positives = 259/589 (43%), Gaps = 28/589 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE   E   ID    L  +M    +     ++ +++    + G  E+ L M  R++E G
Sbjct: 87  LIEGFCETGRIDEAVELFGEMDQPDMH----MYAALVKGLCKAGRGEEGLLMLRRMKELG 142

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P+ + Y  ++D    E +      +   M   G+ P V T   ++ A CK  R+  A 
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 202

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF---GSGVSVYNALINGL 175
           ++L  M  +GC P+  +Y  +V   C  G+V +A  L   MR          YN LI G 
Sbjct: 203 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQ 262

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C +  IE AF LL  M   G+  +  TY+ +I++LC  G  + +  +   +  RG  PN 
Sbjct: 263 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 322

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F SL+ G    G+   A     +M+  G  P+   YS+ I  LC      E +S   +
Sbjct: 323 VTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 382

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+ +I    K  N    ++ W  M+S+GC+P+VV YT  ++  C    
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 442

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            ++A +++ +M+      +T+ +NT + G    G+ D A+ +L QM     +PN  TY  
Sbjct: 443 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIV-----------------TYNTILHGVCRA 458
           LL  L+R+  V++   L        I+L  V                 TY++IL G    
Sbjct: 503 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 562

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G   EA  L+  M  +   L+   +  ++  +CK  +  +A  L+  +   G + P ++S
Sbjct: 563 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHG-FIPHLMS 621

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
           Y  LL G+   G   +A         +   P+   W V++  L    GH
Sbjct: 622 YQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK-GH 669



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 30/376 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++D     L++M   G +     + S I    ++  +++ L     + +  
Sbjct: 328 LINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 387

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP+   Y  ++  LL E  + ++   +  M   G  P+V TY   ++A C   R++ A 
Sbjct: 388 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 447

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGL 175
            +L+EM   G   D ++Y T++     +GQ + A  +  +  S  SV     Y  L+  L
Sbjct: 448 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 507

Query: 176 CKEHKIEEAF-------WLLCEMVD----------RGIDPNVITYSTIISSLCDVGNVET 218
            +   +E+         W   E+ D              PN  TYS+I+    + G  E 
Sbjct: 508 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 567

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  ++  M     + N   +T+L+  +    R  +A  L   MI+ GF+P++++Y  L+ 
Sbjct: 568 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLS 627

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI----SN 334
           GL   G  D+A  +          P+   +  +IDG  K G+    S I   MI      
Sbjct: 628 GLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGH----SDISREMIIMLERM 683

Query: 335 GCSPNVVAYTCMVKVL 350
            C P+   Y  + + L
Sbjct: 684 NCRPSHQTYAMLTEEL 699



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 41/272 (15%)

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  +++ LC+      A   +  M      P+  TFN+ I G C   +VD A  L D+M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM- 460
                  ++ +Y  L++G     R+ EA EL  E++    Q ++  Y  ++ G+C+AG  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 461 ----------------------------------VVEAFQLLGKMLIEGTKLDAITFNII 486
                                               EA ++L +M  +G     +T   +
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I AYCK+G++++A+++L+ ++  G   P++ +Y +L+ G CN G + +A   L KM   G
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRG-CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247

Query: 547 ICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           + P+  T+N+L+R    + GH+   + L  +M
Sbjct: 248 VNPDAVTYNLLIRGQCID-GHIESAFRLLRLM 278


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 230/453 (50%), Gaps = 6/453 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---- 161
           L K   ++ +++ A  L  +M      P  V +  ++S+I KL + +    L  +     
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 162 -GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
             + +  +N +IN  C   ++  A  +L +M+  G +P+ +T  ++++  C    V  ++
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            ++ +M   G  P+I ++ +++       R ++A D +  + R+G  PNVV Y+ L++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C++    +A  +   M +    PNV TYSAL+D F K G +L A +++  M+     P++
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y+ +V  LC ++   +A+ + + M  + C  + V++NT I G C   RV+  MKL  +
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M Q   + N  TYN L+ G  +   V +A E  ++++  GI  +I TYN +L G+C  G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A  +   M      LD +T+  +I   CK GKV  A  L   +   G   PDI++YT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-LKPDIVTYT 474

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           +++ G+C  G + E      KM  EG+  N  T
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 224/418 (53%), Gaps = 5/418 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A++   ++ ++  +   M+  G+  +++T+NI++   C   +V  A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCK 177
           L +M   G  PD V+  ++V+  C+  +V +A  L  +     +   +  YNA+I+ LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             ++ +AF    E+  +GI PNV+TY+ +++ LC+      +  +L  M  +   PN+ +
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++LL  ++  G+  EA +L+  M+R    P++V YS+L++GLC +  +DEA  +   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C  +V +Y+ LI+GF KA  +    +++  M   G   N V Y  +++   Q     
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A     +M F    P+  T+N  + GLC  G ++ A+ + + M++ E   +I TY  ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            G+ +  +V+EA+ L   +   G++ +IVTY T++ G+C  G++ E   L  KM  EG
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 215/394 (54%), Gaps = 1/394 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  ++ T++ +I+  C    V  +L ILG+M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +  SL+ G+    R  +A  L ++M+  G+ P++VAY+ +I  LC    ++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A     ++E     PNV TY+AL++G   +     A+++ + MI    +PNV+ Y+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
               +N    +A  L E+M   +  P+ VT+++ + GLC   R+D A ++ D M    CL
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            ++ +YN L++G  +  RV++  +L  E+ + G+  N VTYNT++ G  +AG V +A + 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   D  T+NI++   C  G++  A+ + + ++   E + DI++YT+++ G+C
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMC 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +G ++EA+     +  +G+ P+  T+  ++  L
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 196/385 (50%), Gaps = 16/385 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++N + R      A+ +  ++ E G KP +  YN I+D+L    R +     +  ++R 
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ PNV TY  L+  LC ++R   A +LL +M  K   P+ ++Y+ ++ +  K G+V EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +EL      M     +  Y++L+NGLC   +I+EA  +   MV +G   +V++Y+T+I+ 
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C    VE  + +  +M  RG   N  ++ +L++G+   G   +A + +++M   G  P+
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +  Y+ L+ GLC NG +++A+ +   M++     ++ TY+ +I G  K G +  A  ++ 
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT--------F 381
            +   G  P++V YT M+  LC   + H+  +L  KM  E    N  T +          
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 519

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYEC 406
           IK +  CG   +A  LL  +K   C
Sbjct: 520 IKKMLSCG---YAPSLLKDIKSGVC 541



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 219/461 (47%), Gaps = 38/461 (8%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L ++M+V G+      F  VIN +        AL +  ++ + G +P       +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++     NR S    +   M   G +P++  YN ++ +LCK  RV+ A+    E+  KG 
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            P+ V+YT +V                              NGLC   +  +A  LL +M
Sbjct: 222 RPNVVTYTALV------------------------------NGLCNSSRWSDAARLLSDM 251

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I PNVITYS ++ +    G V  +  +  +M     +P+I +++SL+ G  L  R 
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRI 311

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ +++ M+ +G L +VV+Y+TLI+G C    +++ + +  +M +     N  TY+ L
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF +AG++  A + +++M   G SP++  Y  ++  LC N    +A  + E M     
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + VT+ T I+G+C  G+V+ A  L   +      P+I TY  ++ GL     + E   
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           L T++++ G+  N  T +         G +  + +L+ KML
Sbjct: 492 LYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKML 524



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 205/399 (51%), Gaps = 1/399 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           SG  +   L     ++ K+ +A  L  +MV     P+++ ++ ++S++  +   +  + +
Sbjct: 48  SGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISL 107

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M V G   ++++F  ++  +    +   A  +  +M++ G+ P+ V   +L++G C 
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              + +AVS+  +M E    P++  Y+A+ID   K   +  A   +  +   G  PNVV 
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT +V  LC ++ +  A  L+  M  +   PN +T++  +      G+V  A +L ++M 
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P+I TY+ L++GL   +R+ EA ++   +   G   ++V+YNT+++G C+A  V 
Sbjct: 288 RMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +  +L  +M   G   + +T+N +I  + + G V+ A +   ++   G  +PDI +Y  L
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNIL 406

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L G+C++G +++A +  + M    +  +  T+  ++R +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 176/349 (50%), Gaps = 2/349 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F  LL   +   +      L  +M   G   ++  ++ +I+  C    +  A+S+
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P+  T  +L++GF +   +  A  + ++M+  G  P++VAY  ++  LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               + A    +++  +   PN VT+   + GLC   R   A +LL  M + +  PN+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ LLD  ++  +V EA EL  E+ +  I  +IVTY+++++G+C    + EA Q+   M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +++N +I  +CK  +V + ++L   +   G    + ++Y +L+ G   +G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG-LVSNTVTYNTLIQGFFQAGDV 381

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            +A  +  +M   GI P+  T+N+L+  L  N G L    ++ + M  +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDN-GELEKALVIFEDMQKR 429



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 180/346 (52%), Gaps = 13/346 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++      ++++ +G+  +   + +++N          A ++   + +  
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ +LDA +   +      ++  M R  ++P++ TY+ L+  LC ++R+D A 
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEAN 315

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++   M +KGC  D VSY T+++  CK  +VE+     RE++ R   S    YN LI G 
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +++A     +M   GI P++ TY+ ++  LCD G +E +L I   M  R  + +I
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T++++G    G+  EA  L+  +  +G  P++V Y+T++ GLC+ G + E  ++  +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           M++     N  T S         G++  ++++  +M+S G +P+++
Sbjct: 496 MKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 161/322 (50%), Gaps = 1/322 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L K  L   + ++A DL++ M++    P++V ++ L+  +      D  +S+  +ME   
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ T++ +I+ F     +  A  I  +M+  G  P+ V    +V   C+ N    A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL++KM      P+ V +N  I  LC   RV+ A     ++++    PN+ TY  L++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
              +R  +A  L++++ K  I  N++TY+ +L    + G V+EA +L  +M+      D 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ ++   C   +++ A Q+ D +   G    D++SY +L+ G C +  +++     +
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 541 KMLNEGICPNFATWNVLVRSLF 562
           +M   G+  N  T+N L++  F
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFF 376



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 106/192 (55%), Gaps = 1/192 (0%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +++ A+ L   M +    P+I  +N LL  ++++ +      L  ++E  GI+ ++ T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++  C    V  A  +LGKML  G + D +T   ++  +C++ +V++A+ L+D++   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++Y +++  +C +  + +AF + +++  +GI PN  T+  LV  L ++     
Sbjct: 185 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 570 PVYILDDIMANK 581
              +L D++  K
Sbjct: 244 AARLLSDMIKKK 255


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/526 (27%), Positives = 257/526 (48%), Gaps = 7/526 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF ++ +    +G+ E+A + F +++ F + P  +  N +L       +   +   + +
Sbjct: 64  GVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKD 123

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G +P VFTYNI++  + K   ++ A  L  EM  +G  PD V+Y +++    K+G+
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 151 VEEA----REL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++      E+ +M     V  YN+LIN  CK  K+ +      EM   G+ PNV++YST
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++ + C    ++ ++     M   G  PN  ++TSL+      G   +A  L N M+  G
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              NVV Y+ LI GLC    M EA  +  +M      PN+ +Y+ALI GF KA N+  A 
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ N +   G  P+++ Y   +  LC       A  ++ +M       NT+ + T +   
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQLN 444
              G     + LL++M++ +    + T+  L+DGL +   V +A +    +    G+Q N
Sbjct: 424 FKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
              Y  ++ G+C+   V  A  L  +M  EG   D   +  ++    KQG +  A+ L D
Sbjct: 484 AAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRD 543

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           ++   G    D+++YTSL+WG      +Q+A  +L++M+ E I P+
Sbjct: 544 KMAEIG-MKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 245/508 (48%), Gaps = 6/508 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ K  +  + DGV+   + M   G   +   +  +I+   + G  E A  +F  ++  G
Sbjct: 104 LLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRG 163

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++D      R       +  MK    EP+V TYN L+   CK+ ++    
Sbjct: 164 LIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGL 223

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE--LAMRFGSGVS---VYNALINGL 175
           +   EM   G  P+ VSY+T+V + CK   +++A +  + MR    V     Y +L++  
Sbjct: 224 EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDAN 283

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + +AF L  EM++ G++ NV+TY+ +I  LCD   ++ +  + G+M   G  PN+
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+ +L+ G++       A +L N +   G  P+++ Y T I GLC    ++ A  V  +
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNE 403

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+EN    N   Y+ L+D + K+GN      +   M        VV +  ++  LC+N +
Sbjct: 404 MQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKL 463

Query: 356 FHQAHSLIEKMAFE-NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
             +A     +M+ +    PN   +   I GLC   +V  A  L +QM Q   +P+ T Y 
Sbjct: 464 VSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYT 523

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+DG L+   + EA  L  ++ + G++L+++ Y +++ G  +   + +A   L +M+ E
Sbjct: 524 SLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGE 583

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQL 502
               D +    ++  + + G ++ A+ L
Sbjct: 584 EILPDEVLCIGVLKKHYELGCIDEAVGL 611



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 223/496 (44%), Gaps = 30/496 (6%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P   +++ +   L+           +S MKR  + P   + N LL    K  + DG  + 
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIE 182
             +M   G  P                               V  YN +I+ + KE  IE
Sbjct: 121 FKDMIGAGSKPT------------------------------VFTYNIMIDCMWKEGDIE 150

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  L  EM  RG+ P+ +TY+++I     VG ++ ++    +M    C P++ ++ SL+
Sbjct: 151 AARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLI 210

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             +   G+  +  + +  M + G  PNVV+YSTL+   C    M +A+     M      
Sbjct: 211 NCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHV 270

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN  TY++L+D   K GNL  A ++ N M+  G   NVV YT ++  LC      +A  L
Sbjct: 271 PNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKL 330

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
             KM      PN  ++N  I G      +D A++LL+++K     P++  Y   + GL  
Sbjct: 331 FGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCG 390

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           + +++ A  ++ E+++ GI+ N + Y T++    ++G   E   LL +M     ++  +T
Sbjct: 391 LEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT 450

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           F ++I   CK   V+ AI    R+       P+   YT+++ G+C    ++ A    ++M
Sbjct: 451 FCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM 510

Query: 543 LNEGICPNFATWNVLV 558
             EG+ P+   +  L+
Sbjct: 511 AQEGLVPDRTAYTSLM 526



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 211/453 (46%), Gaps = 51/453 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           MI+  G+   +D   Y  ++MK   +SC   V  + S+IN + + G   + L+ +  +++
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMK--SMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQ 231

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            GLKP V  Y+ ++DA   E+        Y +M+R G  PN FTY  L+ A CK   +  
Sbjct: 232 SGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSD 291

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV--------YNA 170
           A++L  EM   G   + V+YT ++  +C   +++EA +L   FG  V+         YNA
Sbjct: 292 AFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKL---FGKMVTAGVIPNLASYNA 348

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI+G  K   ++ A  LL E+  RGI P+++ Y T I  LC +  +E +  ++ +M   G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408

Query: 231 CNPNIHSFTSLLKGYLLGGRTHE-----------------------------------AS 255
              N   +T+L+  Y   G   E                                   A 
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468

Query: 256 DLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
           D + RM  + G  PN   Y+ +I GLC    +  A ++  QM +    P+ T Y++L+DG
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             K GN+L A  + ++M   G   +++AYT +V    Q N   +A S +E+M  E   P+
Sbjct: 529 NLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
            V     +K     G +D A+ L   + +++ L
Sbjct: 589 EVLCIGVLKKHYELGCIDEAVGLQSYLMKHQLL 621



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 184/380 (48%), Gaps = 1/380 (0%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P    +  + S L D+G +E +     +M      P   S   LL  +   G+T      
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           +  MI  G  P V  Y+ +I  +   G ++ A  +  +M+     P+  TY+++IDG+ K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G L      +  M S  C P+V+ Y  ++   C++    +      +M      PN V+
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           ++T +   C    +  A+K    M++   +PN  TY  L+D   ++  + +AF L  E+ 
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G++ N+VTY  ++ G+C A  + EA +L GKM+  G   +  ++N +I+ + K   ++
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A++LL+ ++G G   PD++ Y + +WG+C    ++ A + + +M   GI  N   +  L
Sbjct: 361 RALELLNELKGRG-IQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTL 419

Query: 558 VRSLFSNLGHLGPVYILDDI 577
           + + F +      +++L+++
Sbjct: 420 MDAYFKSGNPTEGLHLLEEM 439



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 164/325 (50%), Gaps = 5/325 (1%)

Query: 240 SLLKGYLLGGRTHEASDLWNRM--IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           S+L+  +L     E  D+++ +   R   +P    +  L   L   G ++EA     +M+
Sbjct: 31  SILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMK 90

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P   + + L+  FAK G   G  + +  MI  G  P V  Y  M+  + +     
Sbjct: 91  RFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIE 150

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  L E+M F    P+TVT+N+ I G    GR+D  +   ++MK   C P++ TYN L+
Sbjct: 151 AARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLI 210

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +   +  ++ +  E   E+++ G++ N+V+Y+T++   C+  M+ +A +    M   G  
Sbjct: 211 NCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHV 270

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            +  T+  ++ A CK G +++A +L +  +  G EWN  +++YT+L+ G+C++  M+EA 
Sbjct: 271 PNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWN--VVTYTALIDGLCDAERMKEAE 328

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
               KM+  G+ PN A++N L+   
Sbjct: 329 KLFGKMVTAGVIPNLASYNALIHGF 353


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 257/500 (51%), Gaps = 21/500 (4%)

Query: 53  FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK 112
           F+R+      P+V  +  IL +L+    +  +  ++  ++ +G++PN+ + +IL+   C 
Sbjct: 59  FHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCH 118

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSV 167
             ++  A+ +  ++   G  P+ ++ TT+V   C   +V+EA       LA+ F      
Sbjct: 119 LGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVS 178

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           Y  LINGLCK  +   A  +L ++  + +  +V+ YSTII  LC    V  +  +  +M 
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 238

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +  +P + +  SL+ GY + G+  EA  L   M+ +   P+V  ++ L+  LC  G + 
Sbjct: 239 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 298

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA S    M +    P+V TYS+L+DG+     +  A  +++ +I NG            
Sbjct: 299 EAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVI-NG------------ 345

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+  M  +A SL  +M      P+TVT+N+ I GLC  GR+ +A +L+D+M+     
Sbjct: 346 --FCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQP 403

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            +I TYN L+D L + + V +A  LV +I+  GIQL++ TYN ++ G+C+ G + +A  +
Sbjct: 404 ADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVI 463

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              +LI+G  L   T+ I+I   C +G +N A  LL ++   G   PD ++  +++  + 
Sbjct: 464 FQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNG-CVPDAVTCETIIRALF 522

Query: 528 NSGGMQEAFIYLQKMLNEGI 547
            +   + A   L++M+  G+
Sbjct: 523 ENDKNERAEKLLREMIARGL 542



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 245/500 (49%), Gaps = 31/500 (6%)

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           H+ D + + +R  ++NP           P+V  +  +L +L K         L  ++   
Sbjct: 51  HVDDLVSSFHRMLLLNP----------APSVIEFGKILSSLVKLKHYPTVISLFYQLEFN 100

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ VS + +++  C LGQ+  A     + L M +         L+ G C  HK++EA
Sbjct: 101 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 160

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                 ++  G   N ++Y T+I+ LC +G    +L +L Q+  +  + ++  +++++ G
Sbjct: 161 LHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDG 220

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                  ++A +L++ MI +   P VV  ++LI+G C  G   EA  +  +M   +  P+
Sbjct: 221 LCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPD 280

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V T++ L+D   K G +  A      M+  G  P+VV Y+ ++   C  N  ++A  +  
Sbjct: 281 VYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV-- 338

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
                        ++  I G C    VD A+ L  +M+     P+  TYN L+DGL +  
Sbjct: 339 -------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSG 385

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R+  A+ELV E+   G   +I+TYN+++  +C+   V +A  L+ K+  +G +LD  T+N
Sbjct: 386 RISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYN 445

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
           I+I   CKQG++ +A  +   +   G +N  + +YT ++ G+C  G + EA   L KM +
Sbjct: 446 ILIDGLCKQGRLKDAQVIFQDLLIKG-YNLTVWTYTIMINGLCLEGLLNEAETLLSKMED 504

Query: 545 EGICPNFATWNVLVRSLFSN 564
            G  P+  T   ++R+LF N
Sbjct: 505 NGCVPDAVTCETIIRALFEN 524



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 243/505 (48%), Gaps = 64/505 (12%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL--LAENRFSMINPIYSN 90
           F  +++S  ++      + +FY++   G+KP +   + +++    L + RF+    I++ 
Sbjct: 74  FGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAF--SIFAK 131

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           + + G  PN  T   L+K  C N++V  A      +   G   + VSY T+++ +CK+G+
Sbjct: 132 ILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGE 191

Query: 151 VEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
              A ++  +       + V +Y+ +I+GLCK+  + +A+ L  EM+ + I P V+T ++
Sbjct: 192 TRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNS 251

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   C VG  + + G+L +M ++  NP++++F  L+      G+  EA      M++EG
Sbjct: 252 LIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEG 311

Query: 266 FLPNVVAYSTL--------------------IHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
            +P+VV YS+L                    I+G C    +D+A+S+ Y+M      P+ 
Sbjct: 312 VMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDT 371

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY++LIDG  K+G +  A ++ + M  +G   +++ Y  ++  LC+N+   +A +L++K
Sbjct: 372 VTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKK 431

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +  +    +  T+N  I GLC  G                                   R
Sbjct: 432 IKDQGIQLDMYTYNILIDGLCKQG-----------------------------------R 456

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +K+A  +  ++   G  L + TY  +++G+C  G++ EA  LL KM   G   DA+T   
Sbjct: 457 LKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCET 516

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGG 510
           II A  +  K   A +LL  +   G
Sbjct: 517 IIRALFENDKNERAEKLLREMIARG 541



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 175/361 (48%), Gaps = 13/361 (3%)

Query: 9   CEIDGVQYLLQQMK-VEG--VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C+I   +  LQ ++ +EG  VS    ++ ++I+   +  L   A +++  +    + PTV
Sbjct: 187 CKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTV 246

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
              N ++       +F     +   M    + P+V+T+NIL+ ALCK  ++  A   +  
Sbjct: 247 VTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAV 306

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           M  +G  PD V+Y++++   C + +V +A+           VY+ +ING CK   +++A 
Sbjct: 307 MMKEGVMPDVVTYSSLMDGYCLVNEVNKAKH----------VYSIVINGFCKIKMVDKAL 356

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  EM  R I P+ +TY+++I  LC  G +  +  ++ +M   G   +I ++ SL+   
Sbjct: 357 SLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDAL 416

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  +A  L  ++  +G   ++  Y+ LI GLC  G + +A  +   +        V
Sbjct: 417 CKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTV 476

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ +I+G    G L  A  + ++M  NGC P+ V    +++ L +N+   +A  L+ +
Sbjct: 477 WTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLRE 536

Query: 366 M 366
           M
Sbjct: 537 M 537



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 116/213 (54%), Gaps = 5/213 (2%)

Query: 23  VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS 82
           V  V+ ++ V+  VIN + ++ + ++AL +FY +R   + P    YN ++D L    R S
Sbjct: 329 VNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRIS 388

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
               +   M+  G   ++ TYN L+ ALCKN+ VD A  L+ ++ ++G   D  +Y  ++
Sbjct: 389 YAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILI 448

Query: 143 SSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
             +CK G++++A    ++L ++ +   V  Y  +INGLC E  + EA  LL +M D G  
Sbjct: 449 DGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCV 508

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           P+ +T  TII +L +    E +  +L +M  RG
Sbjct: 509 PDAVTCETIIRALFENDKNERAEKLLREMIARG 541



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 134/276 (48%), Gaps = 25/276 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M ++ ++     F  ++++  + G  ++A      + + G+ P V  Y+ ++D   
Sbjct: 268 LLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYC 327

Query: 77  AENRFSMINPIYS--------------------NMKRDGMEPNVFTYNILLKALCKNNRV 116
             N  +    +YS                     M+   + P+  TYN L+  LCK+ R+
Sbjct: 328 LVNEVNKAKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRI 387

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNAL 171
             A++L+ EM + G   D ++Y +++ ++CK   V++A  L  +    G+ +    YN L
Sbjct: 388 SYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNIL 447

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+GLCK+ ++++A  +  +++ +G +  V TY+ +I+ LC  G +  +  +L +M   GC
Sbjct: 448 IDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGC 507

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            P+  +  ++++      +   A  L   MI  G L
Sbjct: 508 VPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 80/157 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I     L+ +M+  G       + S+I++  +    ++A+ +  +I++ G
Sbjct: 377 LIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQG 436

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++  +  YN ++D L  + R      I+ ++   G    V+TY I++  LC    ++ A 
Sbjct: 437 IQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAE 496

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            LL +M + GC PDAV+  TI+ ++ +  + E A +L
Sbjct: 497 TLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKL 533


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 232/466 (49%), Gaps = 7/466 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           I   MK  G  P+V ++ +L++   K+         L  M   G  P+A+ Y  ++S +C
Sbjct: 16  IVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLC 75

Query: 147 KLGQVEEARELAMRF----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
           K G + EA     R        V  YN +I+G CK   IE+A   L EM + G  P    
Sbjct: 76  KAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHA 135

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           YS+I+ S C  GNV  ++ +  +M  +GC P+I +F  LL G     + HEA +L+  M 
Sbjct: 136 YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMN 195

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             G  P+VV Y+T+I GLC    +DEAV +  +M++    P   TY+ LID   K   L 
Sbjct: 196 SRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQ 255

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKV--LCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
            A +++ +M    C     AY+ ++ +  LC+     +A  + ++M      P  VT+NT
Sbjct: 256 QAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 315

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            ++GL    ++  AM+L   M      PN+ TY  L+  L + ++V+EAF+L++ +   G
Sbjct: 316 LLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKG 375

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              ++  +  +L  + RAG + +AF+L  +M     +    + NI++    ++G V+ A 
Sbjct: 376 FVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAK 435

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
             L ++   G   PD  +Y  L+ G+C  G   +A   +++++ +G
Sbjct: 436 DFLKQMTDTG-IVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 202/409 (49%), Gaps = 13/409 (3%)

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I  L +   + +A  ++ EM   G  P+V ++  +I      G+ +     L +M   G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PN   + +L+      G   EA     RM +    PNVV+Y+ +I G C   ++++A++
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC-APNVVSYNIIIDGYCKARNIEKALA 119

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +MEE   PP    YS+++  F K GN+  A  ++  M + GC P++V +  ++  L 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +    H+A  L   M    C P+ VT+NT I GLC   ++D A+ LL++MKQ +  P   
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL--HGVCRAGMVVEAFQLLG 469
           TY  L+D L +  R+++A+E+  ++ +         Y+ ++  +G+C+A    EA ++  
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL----LDRIRGGGEWNPDIISYTSLLWG 525
           +M   G     +T+N ++       K+ +A++L    LD++       P++ +Y  L+  
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPA-----PNMFTYEILISS 354

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +C +  ++EAF  L  M ++G  P+   W VL+ S  +  G L   + L
Sbjct: 355 LCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLL-SRLARAGRLDDAFEL 402



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 214/484 (44%), Gaps = 49/484 (10%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I KL E   +   + ++++MK  G S        +I  + + G  ++      R+ E GL
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKR--DGMEPNVFTYNILL------------ 107
            P   +YN+++  L    +  M+    S +KR      PNV +YNI++            
Sbjct: 61  FPNAILYNNLISCLC---KAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKA 117

Query: 108 -----------------------KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                                  ++ CK   V  A  +  EM  KGC PD V++  ++S 
Sbjct: 118 LAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSG 177

Query: 145 ICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           + +  ++ EAREL     S      V  YN +I GLCK  K++EA +LL  M    + P 
Sbjct: 178 LWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 237

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRG---CNPNIHSFTSLLKGYLLGGRTHEASD 256
            +TY+T+I  LC    ++ +  +  +M   G   C    +S   L+ G     R  EA +
Sbjct: 238 FVTYTTLIDHLCKFARLQQAYEVFEKM-AEGPCPCTEPAYSVLILINGLCKARRPGEAKE 296

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           ++  M   G  P VV Y+TL+ GL S   + +A+ ++Y M +    PN+ TY  LI    
Sbjct: 297 MFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLC 356

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K   +  A ++ + M   G  P++  +  ++  L +      A  L ++M+  NC     
Sbjct: 357 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 416

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           + N  + G+   G VD A   L QM     +P+  TY++L+ GL    +  +A +LV E+
Sbjct: 417 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476

Query: 437 EKCG 440
            + G
Sbjct: 477 VRDG 480



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 32/291 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  ++D   +LL++MK E VS +   + ++I+   +    +QA ++F ++ E  
Sbjct: 209 MIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGP 268

Query: 61  LKPTVKIYNH--ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
              T   Y+   +++ L    R      ++  M+  G+ P V TYN LL+ L    ++  
Sbjct: 269 CPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQD 328

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKE 178
           A +L   M ++  AP+  +Y  ++SS+CK  QVE                          
Sbjct: 329 AMELTYFMLDQVPAPNMFTYEILISSLCKTDQVE-------------------------- 362

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
               EAF LL  M D+G  P++  +  ++S L   G ++ +  +  +M    C   + S 
Sbjct: 363 ----EAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSS 418

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
             LL G L  G   EA D   +M   G +P+   Y  L+ GLC  G  D+A
Sbjct: 419 NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQA 469


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 283/587 (48%), Gaps = 48/587 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  M+ +G+      +   I+S  R   + Q   +  ++R   + P    YN +++  +
Sbjct: 232 LIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFV 291

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +  +   +++ M    + PN+ TYNIL+   C N   + A +LL  M      P+ V
Sbjct: 292 KEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEV 351

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEM 191
           +  T+++ + K  + + AR +  R+    +  N      +I+GLC+   ++EAF LL EM
Sbjct: 352 TIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEM 411

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ P++IT+S +I+  C VGN+  +  ++ +++  G  PN   F++L+      G  
Sbjct: 412 CKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNV 471

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           +E    +  M   G   +    ++L+  LC NG + EA    + +      PN  T+  +
Sbjct: 472 YEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCI 531

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G+A  G+  GA  ++++MIS G  P+   Y  ++KVLC+   F +A  L++K+   +C
Sbjct: 532 INGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKL---HC 588

Query: 372 PP---NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV-- 426
            P   +T+++NT I  +   G +  A++L ++M Q   LP+  TY  +L GL+R  R+  
Sbjct: 589 IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVC 648

Query: 427 ----------------------------------KEAFELVTEIEKCGIQLNIVTYNTIL 452
                                             K A  L  E+E+ G+ L+++  N+I 
Sbjct: 649 AFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSIT 708

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G  R G V  A  L+ K   +    +  TFNI+++ Y +   + +  +L + +R  G +
Sbjct: 709 DGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFF 768

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            P+ ++Y SL+ G+CN G ++     L+  + E    +  T+N+L+R
Sbjct: 769 -PNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIR 814



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/592 (26%), Positives = 267/592 (45%), Gaps = 42/592 (7%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           S +  VF  +I  Y R G+   A+  F  +   G KP+V   N I+ +++   R  ++  
Sbjct: 102 SSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWX 161

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            +  M    + PNV ++NIL+  LC   ++  A  +L  M   G  P  VSY T++S  C
Sbjct: 162 FFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCC 221

Query: 147 KLGQVEEARELAM-------------------------RFGSGVSV-------------- 167
           K G+ + A  L                           R   G  V              
Sbjct: 222 KKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEV 281

Query: 168 -YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN LING  KE KI  A  +  EM++  + PN+ITY+ +I+  C  GN E +L +L  M
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
                 PN  +  +LL G     +   A ++  R        N ++++ +I GLC NG +
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLL 401

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           DEA  +  +M ++   P++ T+S LI+GF K GNL  A ++ +++   G  PN V ++ +
Sbjct: 402 DEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTL 461

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C+    ++       M       +  T N+ +  LC  G++  A + L  + +   
Sbjct: 462 IYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGL 521

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +PN  T++ +++G   V     AF +  ++  CG   +  TY ++L  +C+     EA +
Sbjct: 522 VPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARK 581

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL K+      +D I++N +I    K G +  A++L + +       PD  +YT +L G+
Sbjct: 582 LLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNIL-PDSYTYTCILSGL 640

Query: 527 CNSGGMQEAFIYLQKMLNEGICP-NFATWNVLVRSLFSNLGHLGPVYILDDI 577
              G +  AFI+L +++ + I   N   +   +  LF        +Y+  ++
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEM 692



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 248/533 (46%), Gaps = 35/533 (6%)

Query: 80  RFSMINPIYSNM---------KRDGMEPNVFTY--NILLKALCKNNRVDGAYKLLVEMGN 128
           +F+ + PI+  +         K+ G+EPN  T+   I    L +      A  +L  +  
Sbjct: 23  KFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQ 82

Query: 129 KG----------------CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSV 167
           K                 C+ +   +  ++    + G V  A      + +R F   V  
Sbjct: 83  KNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYT 142

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
            N ++  + K  +    +    +M+   + PNV +++ +IS LC  G ++ ++ IL  M 
Sbjct: 143 CNMIMASMVKNCRAHLVWXFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMME 202

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P I S+ +LL      GR   A  L + M  +G   +V  Y+  I  LC N    
Sbjct: 203 RNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSA 262

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +   V  +M      PN  +Y+ LI+GF K G +  A++++N MI    SPN++ Y  ++
Sbjct: 263 QGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILI 322

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C N  F +A  L++ M   +  PN VT  T + GL    + D A  +L++       
Sbjct: 323 NGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTS 382

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            N  ++  ++DGL R   + EAF+L+ E+ K G+  +I+T++ +++G C+ G + +A ++
Sbjct: 383 LNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEV 442

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           + K+  EG   + + F+ +IY  CK G V   ++    +   G+ N D  +  SL+  +C
Sbjct: 443 MSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQ-NADNFTCNSLVASLC 501

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH-LGPVYILDDIMA 579
            +G + EA  +L  +   G+ PN  T++ ++   ++N+G   G   + D +++
Sbjct: 502 ENGKLVEAEEFLHHISRIGLVPNSVTFDCIING-YANVGDGSGAFSVFDKMIS 553



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 125/583 (21%), Positives = 259/583 (44%), Gaps = 39/583 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +  + D  + +L++  +   S +      +I+   R GL ++A ++   + + G
Sbjct: 356 LLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDG 415

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  ++ +++        +    + S + R+G  PN   ++ L+   CK   V    
Sbjct: 416 VYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGM 475

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           K    M   G   D  +  ++V+S+C+ G++ EA E                      H 
Sbjct: 476 KFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL--------------------HH 515

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I             G+ PN +T+  II+   +VG+   +  +  +M   G +P+  ++ S
Sbjct: 516 ISRI----------GLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGS 565

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LLK    G    EA  L  ++       + ++Y+TLI  +  +G++ EAV +  +M +N+
Sbjct: 566 LLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNN 625

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQA 359
             P+  TY+ ++ G  + G L+ A     R++     + N + YTC +  L +      A
Sbjct: 626 ILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAA 685

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L ++M  +    + +  N+   G    G+V  A  L+ + +    +PN+TT+N LL G
Sbjct: 686 LYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHG 745

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             R   +   F+L   + + G   N +TY++++ G+C  GM+    ++L   + E + +D
Sbjct: 746 YSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTID 805

Query: 480 AITFNIIIYAYCKQGKVNNAIQL---LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            +TFN++I   C+   ++  I L   ++  R   + +        L+  + +    Q  F
Sbjct: 806 DLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVS----QNYF 861

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           +++ +ML +G  P    +  +++ +   +G +   + L D M 
Sbjct: 862 VFMHEMLKKGFIPTSKQYCTMMKRM-CRVGDIQGAFKLKDQMV 903



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/595 (21%), Positives = 256/595 (43%), Gaps = 48/595 (8%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            ++  + ++ ++  EG   +  +F ++I +  +VG   + +K +  +   G        N 
Sbjct: 436  LNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNS 495

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            ++ +L    +         ++ R G+ PN  T++ ++          GA+ +  +M + G
Sbjct: 496  LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCG 555

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
              P   +Y +++  +CK     EAR+L  +            YN LI  + K   + EA 
Sbjct: 556  HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKG 244
             L  EM+   I P+  TY+ I+S L   G +  +   LG++  +     N   +T  + G
Sbjct: 616  RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                G++  A  L+  M  +G   +++A +++  G    G +  A S+  +    +  PN
Sbjct: 676  LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            +TT++ L+ G+++  +++   +++N M  +G  PN + Y  ++  LC + M      +++
Sbjct: 736  LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
                E+   + +TFN  I+  C    +D  + L   M+ +    +  T   + D L+R  
Sbjct: 796  MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD----- 479
              +  F  + E+ K G       Y T++  +CR G +  AF+L  +M+  G  LD     
Sbjct: 856  VSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAEC 915

Query: 480  ------------------------------AITFNIIIYAYCKQG---KVNNAIQLLDRI 506
                                            TF  +++ +CK+    + +N   L++  
Sbjct: 916  AMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHY 975

Query: 507  RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            R       DI++Y  L+   C +G +  A  + +++  +G+ PN  T+ VLV ++
Sbjct: 976  R----VKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAI 1026



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/563 (22%), Positives = 241/563 (42%), Gaps = 19/563 (3%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  L E  ++   +  L  +   G+  +   F  +IN Y  VG    A  +F ++   G
Sbjct: 496  LVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCG 555

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P+   Y  +L  L     F     +   +    +  +  +YN L+  + K+  +  A 
Sbjct: 556  HHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAV 615

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALING 174
            +L  EM      PD+ +YT I+S + + G++  A     R            VY   I+G
Sbjct: 616  RLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDG 675

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            L K  + + A +L  EM ++G+  ++I  ++I      +G V ++  ++ +   +   PN
Sbjct: 676  LFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPN 735

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            + +F  LL GY  G        L+N M R GF PN + Y +LI GLC++G ++  + +  
Sbjct: 736  LTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK 795

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM----ISNGCSPNVVAYTCMVKVL 350
                 S   +  T++ LI    +  +L     + + M    +S            +V+ +
Sbjct: 796  MFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRM 855

Query: 351  CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
               N F   H +++K       P +  + T +K +C  G +  A KL DQM       + 
Sbjct: 856  VSQNYFVFMHEMLKK----GFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDD 911

Query: 411  TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
                 ++ GL    +++EA  ++  + +        T+ T++H  C+     EA  L  K
Sbjct: 912  AAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL--K 969

Query: 471  MLIEG--TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            +L+E    KLD + +N++I A C  G V  A+   + I+  G   P++ +Y  L+  I  
Sbjct: 970  ILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLL-PNMTTYRVLVSAIST 1028

Query: 529  SGGMQEAFIYLQKMLNEGICPNF 551
               +    I L+ + + G+   +
Sbjct: 1029 KHYVSRGEIVLKDLNDRGLVSGY 1051


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 228/446 (51%), Gaps = 8/446 (1%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           T++IL+  L K   +  A+ L  E    GC  D  +YTTIV  + K  +++EA  L  + 
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 162 GSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            +      ++ YNAL+NGLCK  ++EEA  LL ++VD G  P+V+TY+++I  L      
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +  +M  RG   +   +T+L++G L  G+  +AS ++  M  +G +P+VV  ST+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLC  G +  AV +   ME     PN   YSALI G  KA  +  A ++  +M    C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P+ + Y  ++  LC++     A +  ++M    C P+  T+N  I G C  G  D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + D M    C PN+ TY  L+ GL +  ++ +A      +++ G   +   Y++++ G+C
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           ++G +     L  +M   G   ++ T   +I+  CK  +V+ A+ L + IR  G  +P  
Sbjct: 361 KSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHP-- 417

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKM 542
            +Y S++  +  SG + E     Q+M
Sbjct: 418 YAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 216/466 (46%), Gaps = 32/466 (6%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  +IN   + G+  QA  +       G    +  Y  I+D L    +      +   +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             +G  P + TYN LL  LCK  R++ A  LL ++ + GC PD V+YT+           
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS----------- 109

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                              LI+GL K+ +  EA+ L  EM  RG+  + + Y+ +I  L 
Sbjct: 110 -------------------LIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL 150

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G +  +  +   M  +GC P++ + ++++ G    GR   A  ++  M   G  PN V
Sbjct: 151 QAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEV 210

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            YS LIHGLC    MD A+ +  QM++  C P+  TY+ LIDG  K+G++  A   ++ M
Sbjct: 211 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEM 270

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  GC P+V  Y  ++   C+      A  + + M+   C PN VT+ T I GLC   ++
Sbjct: 271 LEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQL 330

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A      MK+  C P+   Y+ L+DGL +  +++    L  E+E+ G+  N  T   +
Sbjct: 331 TKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRL 389

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +  +C+A  V EA  L   +  EG       +N II A  K GKVN
Sbjct: 390 IFHLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGKVN 434



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 197/425 (46%), Gaps = 7/425 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+    G +     + ++++   +    ++A+ +  +I   G  PT+  YN +L+ L 
Sbjct: 21  LAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLC 80

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   +  +G  P+V TY  L+  L K  R   AYKL  EM ++G A D V
Sbjct: 81  KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTV 140

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YT ++  + + G++ +A  +     S      V   + +I+GLCK  +I  A  +   M
Sbjct: 141 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 200

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+ PN + YS +I  LC    ++ +L +L QM    C P+  ++  L+ G    G  
Sbjct: 201 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 260

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A   ++ M+  G  P+V  Y+ LI G C  G+ D A  V   M  + C PNV TY  L
Sbjct: 261 AAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTL 320

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G  K   L  AS  +  M   GC P+   Y+ +V  LC++        L ++M     
Sbjct: 321 ISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 380

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             N+ T    I  LC   RVD A+ L + +++ E +P+   YN ++  L++  +V E   
Sbjct: 381 -ANSQTRTRLIFHLCKANRVDEAVSLFNAIRK-EGMPHPYAYNSIISALIKSGKVNEGQA 438

Query: 432 LVTEI 436
           +  E+
Sbjct: 439 VYQEM 443



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 205/407 (50%), Gaps = 9/407 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  +I     L++++   G + +   + +++N   ++G  E+A+ +  +I + G
Sbjct: 40  IVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 99

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  ++D L  + R      ++  M   G+  +   Y  L++ L +  ++  A 
Sbjct: 100 CTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQAS 159

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            +   M ++GC PD V+ +T++  +CK G++  A  +     A        VY+ALI+GL
Sbjct: 160 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 219

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K++ A  +L +M      P+ ITY+ +I  LC  G+V  +     +M   GC P++
Sbjct: 220 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDV 279

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  L+ G+   G T  A  +++ M      PNVV Y TLI GLC    + +A S+ YQ
Sbjct: 280 YTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKA-SLYYQ 338

Query: 296 -MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M+E  CPP+   YS+L+DG  K+G L G   +++ M  +G + N    T ++  LC+ N
Sbjct: 339 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKAN 397

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
              +A SL   +  E   P+   +N+ I  L   G+V+    +  +M
Sbjct: 398 RVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 247/503 (49%), Gaps = 18/503 (3%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L   +  G+      F +++ ++   G  ++A++ F R+ +F  +PT  +YN +   L+ 
Sbjct: 132 LADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVD 191

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                +   +Y+ M   G  PN  TY +L+  LCK      A K+  EM  +G  PD   
Sbjct: 192 RGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKI 251

Query: 138 YTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMV 192
           YT ++SS+C  G++E+A R L     +G       Y   ++GLCK  +++EAF     + 
Sbjct: 252 YTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           D G    +I YS +I  L   G  +  L    +M  +  +P+I  +T L++ +   GRT 
Sbjct: 312 DGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTK 371

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           +A  L + M  +GF+P+   Y+TL+  L   G++D A S+  +M +N+   + TT++ +I
Sbjct: 372 DAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMI 431

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G  K G +  A Q+++ M  +GC P V+ Y  ++  L +  M  +A  L  KM   N P
Sbjct: 432 CGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNP 491

Query: 373 P-------------NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
                         +T +    + G+C  G+V  A KLL  + +   +P++ TYN L++G
Sbjct: 492 SLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLING 551

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L +   +  A  L  E++  GI  + +TY T++ G+ RA    +A  L   +L  G    
Sbjct: 552 LCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPS 611

Query: 480 AITFNIIIYAYCKQGKVNNAIQL 502
              +N ++ + C+  K++ AI L
Sbjct: 612 LPIYNTMMRSLCRMKKLSQAINL 634



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/515 (28%), Positives = 253/515 (49%), Gaps = 22/515 (4%)

Query: 67  IYNHILDALLAE--NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           +Y+  +  LLA   +  +M + + ++ +  G+      +  L+ A     R   A +   
Sbjct: 110 LYSRAVSVLLASEPDAVAMFDAL-ADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFS 168

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEH 179
            MG+  C P A  Y  +   +   G +  A  L  R  S       + Y  L++GLCK  
Sbjct: 169 RMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRG 228

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
              +A  +  EM++RGI P+V  Y+ ++SSLC+ G +E +  +L  M   GC P+  ++T
Sbjct: 229 MAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYT 288

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
             L G    GR  EA   +  +   GF   ++ YS LI GL   G  DE +S   +M   
Sbjct: 289 VFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGK 348

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           S  P++T Y+ LI  FA+AG    A  + + M   G  P+   Y  ++K L       +A
Sbjct: 349 SISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRA 408

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            SL+ +M   N   ++ T N  I GLC  G +D AM++ D+M ++ C P + TYN L+DG
Sbjct: 409 QSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDG 468

Query: 420 LLRVNRVKEAFELVTEIE---------KCGIQLNIV----TYNTILHGVCRAGMVVEAFQ 466
           L R   ++EA  L  ++E         +  +  N V    +   ++ G+C++G V++A++
Sbjct: 469 LYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYK 528

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           LL  ++  G   D +T+N +I   CK   ++ A++L   ++  G  +PD I+Y +L+ G+
Sbjct: 529 LLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKG-ISPDEITYGTLIDGL 587

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +    +A +  Q +L  G  P+   +N ++RSL
Sbjct: 588 WRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSL 622



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/568 (25%), Positives = 255/568 (44%), Gaps = 63/568 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G   +   +I +++   + G+A  ALKMF  + E G+ P VKIY  +L +L 
Sbjct: 201 LYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLC 260

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      +  +MK +G  P+  TY + L  LCK  RVD A+     + + G     +
Sbjct: 261 NEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI 320

Query: 137 SYTTIVSSICKLGQVEE-----ARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+ ++  + + G+ +E        L       +++Y  LI    +  + ++AF LL EM
Sbjct: 321 GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            D+G  P+   Y+T++ +L DVGN++                                  
Sbjct: 381 KDKGFVPDTFCYNTLLKALFDVGNID---------------------------------- 406

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  L + M++   + +   ++ +I GLC  G +D+A+ V  +M E+ C P V TY+AL
Sbjct: 407 -RAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNAL 465

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVV--------------AYTCMVKVLCQNNMFH 357
           IDG  +AG L  A  ++++M   G +P++               +   +V  +CQ+    
Sbjct: 466 IDGLYRAGMLEEARMLFHKM-EMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVL 524

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A+ L+  +      P+ VT+NT I GLC    +D A++L  +++     P+  TY  L+
Sbjct: 525 KAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL R +R  +A  L   I + G   ++  YNT++  +CR   + +A  L    L +   
Sbjct: 585 DGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYN 644

Query: 478 LDAITFNIIIYAYC-KQGKVNNAIQLL---DRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           L      I     C + G ++  ++ L   D++ G    NP    YT  + G+C    + 
Sbjct: 645 LSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNP----YTIWVIGLCQVRKID 700

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +A      +   GI    A   +L+  L
Sbjct: 701 DALRIFHILEEFGIVVTPACCALLINYL 728



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 224/494 (45%), Gaps = 20/494 (4%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +YS +KR    P +++  + +    + + V   +  L +    G    + ++  +V +  
Sbjct: 97  LYSAIKRRLRSPLLYSRAVSVLLASEPDAV-AMFDALADARAAGLPAPSAAFRALVLAHS 155

Query: 147 KLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
             G+ +EA E   R G         VYNA+   L     I  A  L   MV  G  PN  
Sbjct: 156 SAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNST 215

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY  ++  LC  G    +L +  +M  RG  P++  +T LL      GR  +A  L   M
Sbjct: 216 TYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM 275

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              G  P+ V Y+  + GLC  G +DEA      +++      +  YS LIDG  +AG  
Sbjct: 276 KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRF 335

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
                 +  M+    SP++  YT +++   +      A  L+++M  +   P+T  +NT 
Sbjct: 336 DEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTL 395

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +K L   G +D A  L+ +M Q   + + TT+N ++ GL +   + +A ++  E+ + G 
Sbjct: 396 LKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC 455

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKM-------------LIEGTKLDAITFNIIIY 488
              ++TYN ++ G+ RAGM+ EA  L  KM             L      D  +   ++ 
Sbjct: 456 HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVD 515

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             C+ G+V  A +LL  I   G   PD+++Y +L+ G+C +  +  A    +++  +GI 
Sbjct: 516 GMCQSGQVLKAYKLLRGIIESGVV-PDVVTYNTLINGLCKAKNLDGALRLFKELQLKGIS 574

Query: 549 PNFATWNVLVRSLF 562
           P+  T+  L+  L+
Sbjct: 575 PDEITYGTLIDGLW 588



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 212/463 (45%), Gaps = 25/463 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L  +  I+    LL  MK  G    E  +   ++   + G  ++A   F  +++ G
Sbjct: 255 LLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGG 314

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +  Y+ ++D L    RF      Y+ M    + P++  Y IL++   +  R   A+
Sbjct: 315 FTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAF 374

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            LL EM +KG  PD   Y T++ ++  +G ++ A+ L             + +N +I GL
Sbjct: 375 LLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGL 434

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+  I++A  +  EM + G  P V+TY+ +I  L   G +E +  +  +M + G NP++
Sbjct: 435 CKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEM-GNNPSL 493

Query: 236 --------------HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
                          S   L+ G    G+  +A  L   +I  G +P+VV Y+TLI+GLC
Sbjct: 494 FLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLC 553

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
              ++D A+ +  +++     P+  TY  LIDG  +A     A+ ++  ++ +G  P++ 
Sbjct: 554 KAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLP 613

Query: 342 AYTCMVKVLCQNNMFHQAHSL---IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            Y  M++ LC+     QA +L        +   P + V  N   +     G +D  +K L
Sbjct: 614 IYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANA--RKCFEDGFLDETVKEL 671

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
            ++ Q     N   Y   + GL +V ++ +A  +   +E+ GI
Sbjct: 672 IKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGI 714



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/356 (19%), Positives = 132/356 (37%), Gaps = 91/356 (25%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +K  ID    +  +M   G   +   + ++I+   R G+ E+A  +F+++ E G
Sbjct: 430 MICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKM-EMG 488

Query: 61  LKPTVKI--------------YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
             P++ +                 ++D +    +      +   +   G+ P+V TYN L
Sbjct: 489 NNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTL 548

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVS----------------------------- 137
           +  LCK   +DGA +L  E+  KG +PD ++                             
Sbjct: 549 INGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGG 608

Query: 138 ------YTTIVSSICKLGQVEEARELAMR---------------------FGSGV----- 165
                 Y T++ S+C++ ++ +A  L +                      F  G      
Sbjct: 609 FPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLDETV 668

Query: 166 -------SVYNAL--------INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                   VY +L        + GLC+  KI++A  +   + + GI       + +I+ L
Sbjct: 669 KELIKIDQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYL 728

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           C   N+  ++ I+     +    +      LL+   +  R H+A  L  RM   G+
Sbjct: 729 CWDRNLNAAVDIMMYTLSKRFIVSQPVGNRLLRSLCIRYRRHDAQALSWRMHLVGY 784


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 263/541 (48%), Gaps = 9/541 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I++ R+    +  + +  ++    + P     + ++++ +   + S    +   + + 
Sbjct: 64  TLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKR 123

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G   NV+ +N+LLK  C++     A  L   M      PD VSY T+++ +CK  ++ EA
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183

Query: 155 RELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +EL      G        ++ALI+G CK   +EE F LL EM   G++ +V  YS +IS 
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISG 243

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  G++E    +  +M  +   PN+ +++ L+       +  EA+ + + M      P+
Sbjct: 244 FCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPD 303

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VVAY+ L  GL  NG   +A+ V   M +    PN  TY+A+I+G  K G +  A  I  
Sbjct: 304 VVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILE 363

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE--NCPPNTVTFNTFIKGLCG 387
            M   G  P+VV Y+ +VK LC      +A  L+  +  +  +  P+   FN  I+ LC 
Sbjct: 364 TMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCK 423

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             R+  A ++   M +     NI TYN L+DG L   ++ +A EL  +    GI  N  T
Sbjct: 424 QRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAAT 483

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y  +++G+C+  M+  A  L  K    GT+     +N ++ + C++  V  A  L   +R
Sbjct: 484 YTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMR 543

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
                +PD++S+  ++ G   +G ++ A   L +MLN  + P+  T+++L+   F  LG 
Sbjct: 544 NANH-DPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR-FLKLGQ 601

Query: 568 L 568
           L
Sbjct: 602 L 602



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 246/516 (47%), Gaps = 42/516 (8%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++  + + G + +A+ +F  ++   L P    YN +++ L    R      ++  MK
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
               +PN  T++ L+   CKN  V+  + LL EM   G   D   Y+ ++S  C  G +E
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251

Query: 153 EAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL-----CE------------ 190
             +EL            V  Y+ L+N LCK+ K +EA  +L     C+            
Sbjct: 252 RGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311

Query: 191 ------------------MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
                             MV RG +PN +TY+ II+ LC  G V+ +LGIL  M  +G  
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKK 371

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF--LPNVVAYSTLIHGLCSNGSMDEAV 290
           P++ ++++L+KG    G+  EA DL N ++ + F   P+V A++ +I  LC    +  A 
Sbjct: 372 PDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAK 431

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            V Y M E   P N+ TY+ LIDG+  AG L  A ++W   + +G SPN   YT ++  L
Sbjct: 432 RVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+  M   A  L  K       P    +NT +  LC    V+ A  L  +M+     P++
Sbjct: 492 CKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDV 551

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            ++N ++DG L+   V+ A EL+ E+    +  + +T++ +++   + G + EA  L  +
Sbjct: 552 VSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYER 611

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           M+  G   DA+ F+ ++  Y  +GK    + +L ++
Sbjct: 612 MVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 244/502 (48%), Gaps = 9/502 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++  MKR+ + P+  +YN ++  LCK  R+  A +L  EM    C P++V+++ ++   C
Sbjct: 151 LFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFC 210

Query: 147 KLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G VEE   L      M     V VY+ALI+G C +  IE    L  EM+ + + PNV+
Sbjct: 211 KNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVV 270

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TYS ++++LC     + +  +L  M      P++ ++T L  G    GR  +A  + + M
Sbjct: 271 TYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           ++ G  PN V Y+ +I+GLC  G +D+A+ +   M +    P+V TYS L+ G    G +
Sbjct: 331 VKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390

Query: 322 LGASQIWNRMISN--GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
             A  + N ++S      P+V A+  +++ LC+      A  +   M     P N VT+N
Sbjct: 391 DEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYN 450

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I G    G++  A++L          PN  TY  L++GL ++  +  A  L  +    
Sbjct: 451 ILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRAS 510

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G +  +  YNT++  +CR   V +A  L  +M       D ++FNIII    K G V +A
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            + L          PD I+++ L+      G + EA    ++M++ G  P+   ++ L++
Sbjct: 571 -KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLK 629

Query: 560 SLFSNLGHLGPVYILDDIMANK 581
             +S  G    V  +   MA+K
Sbjct: 630 G-YSLKGKTEKVVSMLQQMADK 650



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 245/486 (50%), Gaps = 7/486 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++MK      +   F ++I+ + + G  E+   +   + + GL+  V +Y+ ++    
Sbjct: 186 LFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFC 245

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           ++        +++ M R  + PNV TY+ L+ ALCK  +   A ++L  M      PD V
Sbjct: 246 SKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVV 305

Query: 137 SYTTIVSSICKLGQVEEA---RELAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEM 191
           +YT +   + K G+  +A    +L ++ G   +   YNA+INGLCKE ++++A  +L  M
Sbjct: 306 AYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETM 365

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR--GCNPNIHSFTSLLKGYLLGG 249
             +G  P+V+TYST++  LC VG ++ ++ +L  +  +     P++ +F  +++      
Sbjct: 366 AKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQR 425

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R   A  ++  M+  GF  N+V Y+ LI G  S G + +A+ +     ++   PN  TY+
Sbjct: 426 RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYT 485

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI+G  K   L  A  ++N+  ++G  P V  Y  ++  LC+ +   QA +L ++M   
Sbjct: 486 VLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNA 545

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           N  P+ V+FN  I G    G V+ A +LL +M     +P+  T++ L++  L++ ++ EA
Sbjct: 546 NHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEA 605

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             L   +  CG   + V ++++L G    G   +   +L +M  +   LD+   + I+  
Sbjct: 606 ASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILAC 665

Query: 490 YCKQGK 495
            C   K
Sbjct: 666 LCNMSK 671



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 215/430 (50%), Gaps = 38/430 (8%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LI+ L K    +    +  +M    + P   + S +I S  +      + G+LG +  
Sbjct: 63  NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMK 122

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG + N+++F  LLKG+   G +H+A DL+  M R   +P+ V+Y+T+I+GLC    + E
Sbjct: 123 RGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVE 182

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAK------------------------------- 317
           A  +  +M+   C PN  T+SALIDGF K                               
Sbjct: 183 AKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALIS 242

Query: 318 ----AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
                G++    +++N M+    +PNVV Y+C++  LC+   + +A  +++ M      P
Sbjct: 243 GFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRP 302

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + V +     GL   GR   A+K+LD M +    PN  TYN +++GL +  RV +A  ++
Sbjct: 303 DVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGIL 362

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE--GTKLDAITFNIIIYAYC 491
             + K G + ++VTY+T++ G+C  G + EA  LL  ++ +    K D   FN++I   C
Sbjct: 363 ETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELC 422

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           KQ ++ +A ++   +   G +  +I++Y  L+ G  ++G + +A    +  ++ GI PN 
Sbjct: 423 KQRRLRHAKRVYYTMVERG-FPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNA 481

Query: 552 ATWNVLVRSL 561
           AT+ VL+  L
Sbjct: 482 ATYTVLINGL 491



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 199/408 (48%), Gaps = 7/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     K +I+  + L  +M  + V+ +   +  ++N+  +    ++A +M   +    
Sbjct: 240 LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK 299

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P V  Y  + D L    R S    +   M + G EPN  TYN ++  LCK  RVD A 
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-------AMRFGSGVSVYNALIN 173
            +L  M  KG  PD V+Y+T+V  +C +G+++EA +L              V  +N +I 
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQ 419

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
            LCK+ ++  A  +   MV+RG   N++TY+ +I      G +  +L +       G +P
Sbjct: 420 ELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISP 479

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N  ++T L+ G         A  L+N+    G  P V  Y+TL+  LC   S+++A ++ 
Sbjct: 480 NAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLF 539

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M   +  P+V +++ +IDG  KAG++  A ++   M++    P+ + ++ ++    + 
Sbjct: 540 QEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKL 599

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
               +A SL E+M      P+ V F++ +KG    G+ +  + +L QM
Sbjct: 600 GQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 1/295 (0%)

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+  + +TLI  L      D  +SV  +M   S  P  T+ SALI+ F        A  
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   ++  G   NV  +  ++K  CQ+   H+A  L   M      P+ V++NT I GLC
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R+  A +L  +MK  EC PN  T++ L+DG  +   V+E F L+ E+EK G++ ++ 
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            Y+ ++ G C  G +    +L  +ML +    + +T++ ++ A CK+ K   A Q+LD +
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G +  PD+++YT L  G+  +G   +A   L  M+  G  PN  T+N ++  L
Sbjct: 296 T-GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGL 349



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 4/205 (1%)

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           ++ H  H+L +   + N  P+  + NT I  L      D  + +  +M      P  T+ 
Sbjct: 41  SLSHFHHTLQD---YPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL 97

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + L++  +   +   AF ++  I K G  LN+  +N +L G C++G   +A  L   M  
Sbjct: 98  SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
                D +++N +I   CK  ++  A +L   ++ GGE  P+ +++++L+ G C +G ++
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK-GGECKPNSVTFSALIDGFCKNGDVE 216

Query: 534 EAFIYLQKMLNEGICPNFATWNVLV 558
           E F  L++M   G+  +   ++ L+
Sbjct: 217 EGFGLLEEMEKMGLEGDVFVYSALI 241


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 249/495 (50%), Gaps = 21/495 (4%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M R G  P+ +T+N L+   C+ N+VD A  L  +M  +G A D VSY T++  +C+ G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 151 VEEARELAMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++EA EL   FG      + +Y AL+ GLC   + EE   +L  M + G  P+   Y+ +
Sbjct: 61  IDEAVEL---FGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 117

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +   C     + +  +L +MF +G  P + + T+++  Y   GR  +A  +   M   G 
Sbjct: 118 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 177

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PNV  Y+ L+ G C+ G + +A+++  +M      P+  TY+ LI G    G++  A +
Sbjct: 178 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 237

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M  +G   +   Y  ++  LC++    QA SL + +      PN VTFN+ I GLC
Sbjct: 238 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 297

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+ D A K L++M    C P+  TY+  ++ L ++   +E    + E+ +  ++ + V
Sbjct: 298 KSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 357

Query: 447 TYNTILHGVCRA---GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            Y  ++H + +    G+V   +   G+M+  G   D +T+   + AYC +G++N A  +L
Sbjct: 358 NYTIVIHKLLKERNYGLVARTW---GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 414

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             +   G    D ++Y +L+ G  + G    A   L++M +    PN  T+ +L+R    
Sbjct: 415 MEMSKNGV-TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR---- 469

Query: 564 NLGHLGPVYILDDIM 578
              HL  + +++D++
Sbjct: 470 ---HLVRMRLVEDVL 481



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 261/589 (44%), Gaps = 28/589 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +IE L E   ID    L  +M    +     +   + N+ R     E+ L M  R++E G
Sbjct: 51  LIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAER----GEEGLLMLRRMKELG 106

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P+ + Y  ++D    E +      +   M   G+ P V T   ++ A CK  R+  A 
Sbjct: 107 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 166

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           ++L  M  +GC P+  +Y  +V   C  G+V +A  L  +  + GV+     YN LI G 
Sbjct: 167 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 226

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C +  IE AF LL  M   G+  +  TY+ +I++LC  G  + +  +   +  RG  PN 
Sbjct: 227 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 286

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F SL+ G    G+   A     +M+  G  P+   YS+ I  LC      E +S   +
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 346

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    P+   Y+ +I    K  N    ++ W  M+S+GC+P+VV YT  ++  C    
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            ++A +++ +M+      +T+ +NT + G    G+ D A+ +L QM     +PN  TY  
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIV-----------------TYNTILHGVCRA 458
           LL  L+R+  V++   L        I+L  V                 TY++IL G    
Sbjct: 467 LLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 526

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G   EA  L+  M  +   L+   +  ++  +CK  +  +A  L+  +   G + P ++S
Sbjct: 527 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHG-FIPQLMS 585

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
           Y  LL G+   G   +A         +   P+   W V++  L    GH
Sbjct: 586 YQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK-GH 633



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/527 (23%), Positives = 228/527 (43%), Gaps = 92/527 (17%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + +LQ+M  +G++       +VIN+Y + G    AL++   ++  G KP V  YN ++ 
Sbjct: 130 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQ 189

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +      + + M+  G+ P+  TYN+L++  C +  ++ A++LL  M   G   
Sbjct: 190 GFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIA 249

Query: 134 DAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D  +Y  +++++CK G+ ++A      L  R        +N+LINGLCK  K + A+  L
Sbjct: 250 DQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFL 309

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR------------------- 229
            +MV  G  P+  TYS+ I  LC +   +  L  +G+M  +                   
Sbjct: 310 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKE 369

Query: 230 ----------------GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
                           GCNP++ ++T+ ++ Y + GR +EA ++   M + G   + +AY
Sbjct: 370 RNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAY 429

Query: 274 STLIHGLCSNGSMDEAVSVSYQM------------------------------------- 296
           +TL+ G  S G  D AVS+  QM                                     
Sbjct: 430 NTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVW 489

Query: 297 ---------------EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
                          ++N   PN  TYS++++GF++ G    A+ + + M  +  S N  
Sbjct: 490 KAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNED 549

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT +V   C++  +  A  L+  M      P  +++   + GL   G+ D A ++    
Sbjct: 550 IYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNS 609

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           +  +  P+   +  ++DGL++      + E++  +E+   + +  TY
Sbjct: 610 RWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTY 656



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 201/462 (43%), Gaps = 59/462 (12%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+  GV+     +  +I      G  E A ++   +   GL      YN +++AL 
Sbjct: 203 LLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R      ++ +++  G++PN  T+N L+  LCK+ + D A+K L +M + GC PD  
Sbjct: 263 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 322

Query: 137 SYTTIVSSICKLGQVEE------------------------------------ARELAMR 160
           +Y++ +  +CK+   +E                                    AR     
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 161 FGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             SG    V  Y   +   C E ++ EA  +L EM   G+  + + Y+T++     +G  
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR---------------THEASD---LW 258
           + ++ IL QM      PN  ++  LL+ +L+  R                 E +D   L+
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILLR-HLVRMRLVEDVLPLTPAGVWKAIELTDVFGLF 501

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           + M +  FLPN   YS+++ G   +G  +EA S+   M+E+S   N   Y+AL+  F K+
Sbjct: 502 DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKS 561

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
              L A  +   MI +G  P +++Y  ++  L       +A  +     +++  P+ + +
Sbjct: 562 KRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVW 621

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
              I GL   G  D + +++  +++  C P+  TY  L + L
Sbjct: 622 KVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 62/148 (41%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+  V  L   MK      + G + S++  +   G  E+A  +   ++E  +     IY 
Sbjct: 493 ELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYT 552

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++       R+     +  +M + G  P + +Y  LL  L    + D A ++ +    K
Sbjct: 553 ALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWK 612

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL 157
             +PD + +  I+  + K G  + +RE+
Sbjct: 613 DYSPDEIVWKVIIDGLIKKGHSDISREM 640


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 230/453 (50%), Gaps = 6/453 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---- 161
           L K   ++ +++ A  L  +M      P  V +  ++S+I KL + +    L  +     
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 162 -GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
             + +  +N +IN  C   ++  A  +L +M+  G +P+ +T  ++++  C    V  ++
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            ++ +M   G  P+I ++ +++       R ++A D +  + R+G  PNVV Y+ L++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C++    +A  +   M +    PNV TYSAL+D F K G +L A +++  M+     P++
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y+ ++  LC ++   +A+ + + M  + C  + V++NT I G C   RV+  MKL  +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M Q   + N  TYN L+ G  +   V +A E  ++++  GI  +I TYN +L G+C  G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A  +   M      LD +T+  +I   CK GKV  A  L   +   G   PDI++YT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG-LKPDIVTYT 474

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           +++ G+C  G + E      KM  EG+  N  T
Sbjct: 475 TMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 224/418 (53%), Gaps = 5/418 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++  +N +L A++   ++ ++  +   M+  G+  +++T+NI++   C   +V  A  +
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCK 177
           L +M   G  PD V+  ++V+  C+  +V +A  L  +     +   +  YNA+I+ LCK
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             ++ +AF    E+  +GI PNV+TY+ +++ LC+      +  +L  M  +   PN+ +
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++LL  ++  G+  EA +L+  M+R    P++V YS+LI+GLC +  +DEA  +   M 
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C  +V +Y+ LI+GF KA  +    +++  M   G   N V Y  +++   Q     
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A     +M F    P+  T+N  + GLC  G ++ A+ + + M++ E   +I TY  ++
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            G+ +  +V+EA+ L   +   G++ +IVTY T++ G+C  G++ E   L  KM  EG
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 215/394 (54%), Gaps = 1/394 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  ++ T++ +I+  C    V  +L ILG+M 
Sbjct: 88  FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +  SL+ G+    R  +A  L ++M+  G+ P++VAY+ +I  LC    ++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A     ++E     PNV TY+AL++G   +     A+++ + MI    +PNV+ Y+ ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
               +N    +A  L E+M   +  P+ VT+++ I GLC   R+D A ++ D M    CL
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            ++ +YN L++G  +  RV++  +L  E+ + G+  N VTYNT++ G  +AG V +A + 
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   D  T+NI++   C  G++  A+ + + ++   E + DI++YT+++ G+C
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR-EMDLDIVTYTTVIRGMC 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +G ++EA+     +  +G+ P+  T+  ++  L
Sbjct: 447 KTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 196/385 (50%), Gaps = 16/385 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++N + R      A+ +  ++ E G KP +  YN I+D+L    R +     +  ++R 
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ PNV TY  L+  LC ++R   A +LL +M  K   P+ ++Y+ ++ +  K G+V EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +EL      M     +  Y++LINGLC   +I+EA  +   MV +G   +V++Y+T+I+ 
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C    VE  + +  +M  RG   N  ++ +L++G+   G   +A + +++M   G  P+
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +  Y+ L+ GLC NG +++A+ +   M++     ++ TY+ +I G  K G +  A  ++ 
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT--------F 381
            +   G  P++V YT M+  LC   + H+  +L  KM  E    N  T +          
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 519

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYEC 406
           IK +  CG   +A  LL  +K   C
Sbjct: 520 IKKMLSCG---YAPSLLKDIKSGVC 541



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 219/461 (47%), Gaps = 38/461 (8%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L ++M+V G+      F  VIN +        AL +  ++ + G +P       +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL 161

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++     NR S    +   M   G +P++  YN ++ +LCK  RV+ A+    E+  KG 
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            P+ V+YT +V                              NGLC   +  +A  LL +M
Sbjct: 222 RPNVVTYTALV------------------------------NGLCNSSRWSDAARLLSDM 251

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I PNVITYS ++ +    G V  +  +  +M     +P+I +++SL+ G  L  R 
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ +++ M+ +G L +VV+Y+TLI+G C    +++ + +  +M +     N  TY+ L
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF +AG++  A + +++M   G SP++  Y  ++  LC N    +A  + E M     
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + VT+ T I+G+C  G+V+ A  L   +      P+I TY  ++ GL     + E   
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           L T++++ G+  N  T +         G +  + +L+ KML
Sbjct: 492 LYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKML 524



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 205/399 (51%), Gaps = 1/399 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           SG  +   L     ++ K+ +A  L  +MV     P+++ ++ ++S++  +   +  + +
Sbjct: 48  SGGDLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISL 107

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M V G   ++++F  ++  +    +   A  +  +M++ G+ P+ V   +L++G C 
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              + +AVS+  +M E    P++  Y+A+ID   K   +  A   +  +   G  PNVV 
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT +V  LC ++ +  A  L+  M  +   PN +T++  +      G+V  A +L ++M 
Sbjct: 228 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P+I TY+ L++GL   +R+ EA ++   +   G   ++V+YNT+++G C+A  V 
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +  +L  +M   G   + +T+N +I  + + G V+ A +   ++   G  +PDI +Y  L
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG-ISPDIWTYNIL 406

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L G+C++G +++A +  + M    +  +  T+  ++R +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 176/349 (50%), Gaps = 2/349 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F  LL   +   +      L  +M   G   ++  ++ +I+  C    +  A+S+
Sbjct: 83  PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P+  T  +L++GF +   +  A  + ++M+  G  P++VAY  ++  LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               + A    +++  +   PN VT+   + GLC   R   A +LL  M + +  PN+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ LLD  ++  +V EA EL  E+ +  I  +IVTY+++++G+C    + EA Q+   M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +++N +I  +CK  +V + ++L   +   G    + ++Y +L+ G   +G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG-LVSNTVTYNTLIQGFFQAGDV 381

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            +A  +  +M   GI P+  T+N+L+  L  N G L    ++ + M  +
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDN-GELEKALVIFEDMQKR 429



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 180/346 (52%), Gaps = 13/346 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++      ++++ +G+  +   + +++N          A ++   + +  
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ +LDA +   +      ++  M R  ++P++ TY+ L+  LC ++R+D A 
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++   M +KGC  D VSY T+++  CK  +VE+     RE++ R   S    YN LI G 
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +++A     +M   GI P++ TY+ ++  LCD G +E +L I   M  R  + +I
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T++++G    G+  EA  L+  +  +G  P++V Y+T++ GLC+ G + E  ++  +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           M++     N  T S         G++  ++++  +M+S G +P+++
Sbjct: 496 MKQEGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 161/322 (50%), Gaps = 1/322 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L K  L   + ++A DL++ M++    P++V ++ L+  +      D  +S+  +ME   
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ T++ +I+ F     +  A  I  +M+  G  P+ V    +V   C+ N    A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL++KM      P+ V +N  I  LC   RV+ A     ++++    PN+ TY  L++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
              +R  +A  L++++ K  I  N++TY+ +L    + G V+EA +L  +M+      D 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ +I   C   +++ A Q+ D +   G    D++SY +L+ G C +  +++     +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 541 KMLNEGICPNFATWNVLVRSLF 562
           +M   G+  N  T+N L++  F
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFF 376



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 106/192 (55%), Gaps = 1/192 (0%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +++ A+ L   M +    P+I  +N LL  ++++ +      L  ++E  GI+ ++ T+N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++  C    V  A  +LGKML  G + D +T   ++  +C++ +V++A+ L+D++   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G + PDI++Y +++  +C +  + +AF + +++  +GI PN  T+  LV  L ++     
Sbjct: 185 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 570 PVYILDDIMANK 581
              +L D++  K
Sbjct: 244 AARLLSDMIKKK 255


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 239/450 (53%), Gaps = 15/450 (3%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA--VSYTTIVSSICKLGQVE 152
           G +P V   NIL+K LC + RV  A +++  +G     P A  ++Y T+V+  C+ G ++
Sbjct: 91  GKDPAVIPCNILIKKLCADGRVADAERVVEALG-----PSATIITYNTMVNGYCRAGNID 145

Query: 153 EAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            AR +  ++ F      YN LI  LC    + +A  +  +M+ RG  P+V+TYS ++ + 
Sbjct: 146 AARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDAT 205

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C     + ++ +L +M  +GC P+I ++  L+      G   EA  + N +   G  P+ 
Sbjct: 206 CKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDA 265

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ ++  LCS+   +EA  +  +M  N C P+  T++A+I    + G +  A+++  +
Sbjct: 266 VTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQ 325

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQA----HSLIEKMAFENCPPNTVTFNTFIKGLC 386
           M  +GC+P+++ Y+ ++  LC+     +A      L+ +M  +NC P+ VTFNT I  LC
Sbjct: 326 MSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLC 385

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL-RVNRVKEAFELVTEIEKCGIQLNI 445
             G  D A+K++D+M ++ C+P+ITTYN ++DG L +  + +EA +L+  +   G+  + 
Sbjct: 386 QKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDT 445

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TY ++  G+ R   +  A  +  ++   G   D + +N I+   CK+ + + AI     
Sbjct: 446 TTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAY 505

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           +   G   PD  +Y  L+ GI   G ++EA
Sbjct: 506 MVSNG-CMPDESTYIILVEGIAYEGFLEEA 534



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 233/466 (50%), Gaps = 13/466 (2%)

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS 163
           N  L+ L +   +DGA +L+  +   G  P  +    ++  +C  G+V +A  +    G 
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124

Query: 164 GVSV--YNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSL 220
             ++  YN ++NG C+   I+ A      M+D     P+  TY+ +I +LC  G V  +L
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAAR----RMIDSVPFAPDTFTYNPLIRALCVRGCVLDAL 180

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +   M  RGC+P++ +++ LL          +A  L + M  +G  P++V Y+ LI+ +
Sbjct: 181 AVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAM 240

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           CS G + EA+ V   +    C P+  TY+ ++     +     A ++  +M SN C+P+ 
Sbjct: 241 CSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDE 300

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD- 399
           V +  ++  LCQ     +A  ++ +M+   C P+ +T+++ + GLC   RVD A+KLL  
Sbjct: 301 VTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKE 360

Query: 400 ---QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG-V 455
              +M    C+P+  T+N ++  L +      A ++V E+ + G   +I TYN I+ G +
Sbjct: 361 LLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFL 420

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           C++    EA  LL  M+  G   D  T+  + +   ++ ++  AI +  R++  G  +PD
Sbjct: 421 CKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMG-LSPD 479

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            + Y ++L G+C       A  +   M++ G  P+ +T+ +LV  +
Sbjct: 480 KMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGI 525



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 231/470 (49%), Gaps = 16/470 (3%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  + AL++ + I   G  P V   N ++  L A+ R +    +   +   G    + TY
Sbjct: 75  GELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSATIITY 131

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMR 160
           N ++   C+   +D A +++  +     APD  +Y  ++ ++C  G V +A  +    + 
Sbjct: 132 NTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALCVRGCVLDALAVFDDMLH 188

Query: 161 FGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G   SV  Y+ L++  CKE   ++A  LL EM  +G +P+++TY+ +I+++C  G+V  
Sbjct: 189 RGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGE 248

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L +L  +   GC P+  ++T +LK      R  EA  L  +M      P+ V ++ +I 
Sbjct: 249 ALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVIT 308

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA----SQIWNRMISN 334
            LC  G +  A  V  QM E+ C P++ TYS+++DG  K   +  A     ++   M+S 
Sbjct: 309 SLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSK 368

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG-LCGCGRVDW 393
            C P+ V +  ++  LCQ  +F +A  ++++M+   C P+  T+N  + G LC   + + 
Sbjct: 369 NCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEE 428

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ LL+ M      P+ TTY  L  GL R + ++ A  +   ++  G+  + + YN IL 
Sbjct: 429 ALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILL 488

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           G+C+      A      M+  G   D  T+ I++     +G +  A +LL
Sbjct: 489 GLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 219/443 (49%), Gaps = 16/443 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+KL     +   + +++ +   G S +   + +++N Y R G  + A +M   I    
Sbjct: 102 LIKKLCADGRVADAERVVEAL---GPSATIITYNTMVNGYCRAGNIDAARRM---IDSVP 155

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++ AL           ++ +M   G  P+V TY+ILL A CK +    A 
Sbjct: 156 FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAV 215

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            LL EM +KGC PD V+Y  +++++C  G V EA ++     S         Y  ++  L
Sbjct: 216 VLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSL 275

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   + EEA  LL +M      P+ +T++ +I+SLC  G V  +  +L QM   GC P+I
Sbjct: 276 CSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDI 335

Query: 236 HSFTSLLKGYLLGGRTHEA----SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            +++S++ G     R  EA     +L   M+ +  +P+ V ++T+I  LC  G  D A+ 
Sbjct: 336 ITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIK 395

Query: 292 VSYQMEENSCPPNVTTYSALIDGF-AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           V  +M E+ C P++TTY+ ++DGF  K+     A  + N M+SNG  P+   Y  +   L
Sbjct: 396 VVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGL 455

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            + +   +A  +  ++      P+ + +N  + GLC   R D A+     M    C+P+ 
Sbjct: 456 SREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDE 515

Query: 411 TTYNELLDGLLRVNRVKEAFELV 433
           +TY  L++G+     ++EA EL+
Sbjct: 516 STYIILVEGIAYEGFLEEAKELL 538



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 7/215 (3%)

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           L Q      A  L+  ++     P  +  N  IK LC  GRV  A ++++ +        
Sbjct: 71  LVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSA---T 127

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TYN +++G  R   +  A  ++  +       +  TYN ++  +C  G V++A  +  
Sbjct: 128 IITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFD 184

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            ML  G     +T++I++ A CK+     A+ LLD +R  G   PDI++Y  L+  +C+ 
Sbjct: 185 DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKG-CEPDIVTYNVLINAMCSQ 243

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G + EA   L  + + G  P+  T+  +++SL S+
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSS 278



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 101/191 (52%), Gaps = 8/191 (4%)

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  ++GL   G +D A++L+  +      P +   N L+  L    RV +A  +V   E 
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVV---EA 121

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G    I+TYNT+++G CRAG +  A +++  +       D  T+N +I A C +G V +
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFAP---DTFTYNPLIRALCVRGCVLD 178

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ + D +   G  +P +++Y+ LL   C   G ++A + L +M ++G  P+  T+NVL+
Sbjct: 179 ALAVFDDMLHRG-CSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLI 237

Query: 559 RSLFSNLGHLG 569
            ++ S  G +G
Sbjct: 238 NAMCSQ-GDVG 247



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N  L GL++   +  A  LV  I   G    ++  N ++  +C  G V +A +++  +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL-- 122

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G     IT+N ++  YC+ G ++ A +++D +     + PD  +Y  L+  +C  G + 
Sbjct: 123 -GPSATIITYNTMVNGYCRAGNIDAARRMIDSV----PFAPDTFTYNPLIRALCVRGCVL 177

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +A      ML+ G  P+  T+++L+ +     G+   V +LD++ + 
Sbjct: 178 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSK 224



 Score = 46.2 bits (108), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L + C+ +    LL  M   G+      + S+     R    E+A+ MF R++  GL P 
Sbjct: 420 LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPD 479

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
             +YN IL  L  + R  +    ++ M  +G  P+  TY IL++ +     ++ A +LL 
Sbjct: 480 KMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL- 538

Query: 125 EMGNKGC 131
             GN  C
Sbjct: 539 --GNLSC 543


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 159/527 (30%), Positives = 258/527 (48%), Gaps = 7/527 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQM-KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I+KL      D V  LL +M    G    E +F++VI    R  +    +K+   I +F
Sbjct: 78  LIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKF 137

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P++KI+N ILD L+  +           M   G++ + +T+ IL+K LC  NR+   
Sbjct: 138 GKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDG 197

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-YNALINGLCKE 178
           ++LL  M ++G  P+AV Y T++ ++CK G+V  AR L         V +N LI   CKE
Sbjct: 198 FRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEEPNDVTFNVLIAAYCKE 257

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             + +A  LL +    G  P+V+T + ++  LC+ G V  ++ +L ++  +G   ++ ++
Sbjct: 258 ENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAY 317

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +LL+G+   G+   A      M R+G LPNV  Y+ LI G C +G  D A+ +   M+ 
Sbjct: 318 NTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKT 377

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN--GCSPNVVAYTCMVKVLCQNNMF 356
           +    N  TY  LI G    G +    +I   M  +  G    +  Y  ++  L + NM+
Sbjct: 378 DGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMW 437

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A   + KM  E   P  V  +  I G C  G V  A  + DQM      PNI  Y+ L
Sbjct: 438 DEALEFLMKM--EKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCL 495

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           + G  +   ++EAFEL+ E+   G  L    +N ++HG C  G    A +LL  M+  G 
Sbjct: 496 VHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGRGC 555

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
             D  T++ +I A C++G    A+ + +++   G   PD  ++ SLL
Sbjct: 556 VPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKG-ITPDSSTWNSLL 601



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 250/536 (46%), Gaps = 81/536 (15%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSS---------------- 144
           TY  L++ LC  +R D  Y+LL EM +  G  PD   + T++                  
Sbjct: 74  TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDL 133

Query: 145 ICKLGQ------------------VEEARELAMR--FGSGVS----VYNALINGLCKEHK 180
           I K G+                  ++ ARE   +   GSGV      +  L+ GLC  ++
Sbjct: 134 ISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNR 193

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I + F LL  M  RG+ PN + Y+T++ +LC  G V  +  ++ ++      PN  +F  
Sbjct: 194 IGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEI----EEPNDVTFNV 249

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  Y       +A  L  +    GF+P+VV  + ++  LC+ G + EAV +  ++E   
Sbjct: 250 LIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKG 309

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              +V  Y+ L+ GF + G +  A +    M   GC PNV  Y  ++   C + MF  A 
Sbjct: 310 GLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMAL 369

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE--CLPNITTYNELLD 418
            +   M  +    N  T++T IKGL   GR++  +K+L+ M++ +      I+ YN +L 
Sbjct: 370 DMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLY 429

Query: 419 GLLRVNRVKEAFELVTEIEKC---------------------------------GIQLNI 445
           GL + N   EA E + ++EK                                  G   NI
Sbjct: 430 GLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNI 489

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           + Y+ ++HG C+ G + EAF+L+ +M+  G  L A  FN +I+ +C QGK  +A++LLD 
Sbjct: 490 LVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDD 549

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + G G   PD  +Y+ L+  +C  G  Q+A     +M+ +GI P+ +TWN L+  L
Sbjct: 550 MVGRG-CVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRL 604



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 218/492 (44%), Gaps = 78/492 (15%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEM---------------VDRGID-----PN 199
           +F    S Y ALI  LC  H+ +  + LL EM               V RG+      P+
Sbjct: 67  KFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPH 126

Query: 200 VITYSTIISSLCDVGNVETSLGILG----------------QMFVRGCNPNIHSFTSLLK 243
           VI    +IS      +++    IL                 QM   G   + ++F  L+K
Sbjct: 127 VIKVLDLISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMK 186

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G  L  R  +   L   M   G  PN V Y+TL+H LC NG +  A S+  ++EE    P
Sbjct: 187 GLCLTNRIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----P 242

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  T++ LI  + K  NL+ A  +  +  S G  P+VV  T +V++LC      +A  ++
Sbjct: 243 NDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEML 302

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E++ ++    + V +NT ++G C  G++  A + L +M++  CLPN+ TYN L+ G    
Sbjct: 303 ERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDS 362

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM------------ 471
                A ++  +++  GI  N  TY+T++ G+   G + E  ++L  M            
Sbjct: 363 GMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRIS 422

Query: 472 ---------------------LIEGTKL--DAITFNIIIYAYCKQGKVNNAIQLLDR-IR 507
                                L++  KL   A+  ++ I  +C++G V NA  + D+ I 
Sbjct: 423 PYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMIN 482

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            GG   P+I+ Y  L+ G C  G ++EAF  + +M+  G     + +N L+         
Sbjct: 483 EGG--TPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKD 540

Query: 568 LGPVYILDDIMA 579
              + +LDD++ 
Sbjct: 541 ESALKLLDDMVG 552



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 16/328 (4%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   +A++M  R+   G    V  YN +L       +  + +     M+R G  PNV TY
Sbjct: 293 GRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETY 352

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----A 158
           NIL+   C +   D A  +  +M   G + +  +Y T++  +   G++EE  ++      
Sbjct: 353 NILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEE 412

Query: 159 MRFGSG--VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            + GSG  +S YN+++ GL K++  +EA   L +M    + P  +  S  I   C+ G V
Sbjct: 413 SKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKM--EKLFPRAVDRSLRILGFCEKGAV 470

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +  QM   G  PNI  +  L+ G+   G   EA +L N M+  G+      ++ L
Sbjct: 471 KNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNAL 530

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           IHG C  G  + A+ +   M    C P+  TYS LID   + GN   A  I+N+MI  G 
Sbjct: 531 IHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGI 590

Query: 337 SPNVVAYTCMVKVLCQ-------NNMFH 357
           +P+   +  ++  L +        N+FH
Sbjct: 591 TPDSSTWNSLLIRLSKEIIWLENKNVFH 618


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 261/537 (48%), Gaps = 39/537 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++ +Y RVG+ ++A+   ++ +  G  P +   N +++ L+   +  M   IY ++KR G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ----V 151
           + PN +TY I +KALC+    + A  +  EM   G  P+AV+ +T +  +C   +     
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 152 EEAREL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E  R L A  +      Y A+I G C E K++EA  +  +MV+ GI P+   Y  +I + 
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAY 342

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  GN+  ++ +   M   G   N+                    D +      G   + 
Sbjct: 343 CKAGNLLQAVALHNDMVSNGIKTNL-------------------VDQFKEFRDSGIFLDE 383

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+ ++  LC  G ++EAV +  +M+      +V  Y+ LI G+   G L+ A  ++  
Sbjct: 384 VLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEE 443

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  P++V Y  +V    +N +  +A  L++ +  +   PN+ T N  I+GLC  G+
Sbjct: 444 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK 503

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI--------Q 442
           V  A   L+ ++  +CL N   Y+ ++DG  + N  ++A+EL + + K GI        +
Sbjct: 504 VKEAEAFLNTLED-KCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVE 559

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            N + Y  ++   CR G +  A QL+  ML+E G   D IT+ ++I  YC+   +  A  
Sbjct: 560 PNQIMYGKLIGAFCRDGDMKRA-QLVFDMLVERGITPDVITYTMMINGYCRVNCLREARD 618

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + + ++  G   PD+I+YT +L G   +  +Q+A     +M+  G+ P+  T+  L+
Sbjct: 619 IFNDMKERG-IKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/512 (22%), Positives = 247/512 (48%), Gaps = 26/512 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +L E  +ID    + + +K  G++ ++  +   I +  R G  E+A+ +F  + E G
Sbjct: 198 LMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAG 257

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P     +  ++ L +  R  +       ++      + F Y  +++  C   ++  A 
Sbjct: 258 VNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAE 317

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            + ++M N+G APD   Y  ++ + CK G + +A          V+++N +++   K + 
Sbjct: 318 DVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQA----------VALHNDMVSNGIKTNL 367

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++      E  D GI  + + Y+ ++ +LC +G VE ++ +L +M  R  + ++  +T+
Sbjct: 368 VDQ----FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTT 423

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ GY L G+  +A +++  M   G  P++V Y+ L+ G   NG   EA+ +   +    
Sbjct: 424 LIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQG 483

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN  T++ +I+G   AG +  A    N  + + C  N   Y+ MV   C+ N   +A+
Sbjct: 484 LKPNSATHNRIIEGLCMAGKVKEAEAFLN-TLEDKCLEN---YSAMVDGYCKANFTRKAY 539

Query: 361 SLIEKMAFE--------NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
            L  +++ +        +  PN + +   I   C  G +  A  + D + +    P++ T
Sbjct: 540 ELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVIT 599

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  +++G  RVN ++EA ++  ++++ GI+ +++TY  +L G  +   + +A  L  +M+
Sbjct: 600 YTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMI 659

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
             G + D +T+  ++   C  G  +   Q L+
Sbjct: 660 ARGLQPDIVTYTALLPGKCNFGSRHFDNQWLE 691



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 227/492 (46%), Gaps = 42/492 (8%)

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----R 155
           +   ++L+KA  +    D A   L +   +G  P  +S   +++ + + G+++ A    R
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 156 ELAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            L  R G   +   Y   I  LC++   EEA  +  EM + G++PN +T ST I  LC  
Sbjct: 217 HLK-RLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLC-- 273

Query: 214 GNVETSLGILGQMFVRGCNPNIHSF--TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
            +  + LG      +R  N  I +F  T++++G+    +  EA D++  M+ EG  P+  
Sbjct: 274 SHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGY 333

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT----------------YSALIDGF 315
            Y  LIH  C  G++ +AV++   M  N    N+                  Y+ ++D  
Sbjct: 334 IYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDAL 393

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G +  A ++ N M     S +VV YT ++   C       A ++ E+M      P+ 
Sbjct: 394 CKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDI 453

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+N  + G    G    A++LLD +      PN  T+N +++GL    +VKEA   +  
Sbjct: 454 VTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNT 513

Query: 436 IE-KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG--------TKLDAITFNII 486
           +E KC     +  Y+ ++ G C+A    +A++L  ++  +G         + + I +  +
Sbjct: 514 LEDKC-----LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKL 568

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I A+C+ G +  A  + D +   G   PD+I+YT ++ G C    ++EA      M   G
Sbjct: 569 IGAFCRDGDMKRAQLVFDMLVERG-ITPDVITYTMMINGYCRVNCLREARDIFNDMKERG 627

Query: 547 ICPNFATWNVLV 558
           I P+  T+ V++
Sbjct: 628 IKPDVITYTVVL 639



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 222/530 (41%), Gaps = 66/530 (12%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            ++ +K  G + NV TY  L++ LC+         LL E+   G     + +   ++++ 
Sbjct: 83  FFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEI--VGSKESVLGFD--ITALF 138

Query: 147 KLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            + +              + V + L+    +    +EA   L +   RG  P++++ + +
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++ L + G ++ ++ I   +   G NPN +++   +K     G   EA D++  M   G 
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258

Query: 267 LPNVVAYSTLIHGLCSNGSMD-----------------------------------EAVS 291
            PN V  ST I GLCS+   D                                   EA  
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA--------- 342
           V   M      P+   Y ALI  + KAGNLL A  + N M+SNG   N+V          
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSG 378

Query: 343 -------YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
                  Y  +V  LC+     +A  L+ +M       + V + T I G C  G++  A 
Sbjct: 379 IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAK 438

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            + ++MK+    P+I TYN L+ G  R    KEA EL+  I   G++ N  T+N I+ G+
Sbjct: 439 NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG----- 510
           C AG V EA   L  +  E   L+   ++ ++  YCK      A +L  R+   G     
Sbjct: 499 CMAGKVKEAEAFLNTL--EDKCLE--NYSAMVDGYCKANFTRKAYELFSRLSKQGILRML 554

Query: 511 --EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             +  P+ I Y  L+   C  G M+ A +    ++  GI P+  T+ +++
Sbjct: 555 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 604



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 192/440 (43%), Gaps = 65/440 (14%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
            V+CS   +I  + S++R  L  +AL+    +R          Y  ++    +E +    
Sbjct: 262 AVTCS--TYIEGLCSHKRSDLGYEALRA---LRAANWPIDTFAYTAVIRGFCSEMKLKEA 316

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCK-----------NNRVDGAYKL-----LVEMGN 128
             ++ +M  +G+ P+ + Y  L+ A CK           N+ V    K        E  +
Sbjct: 317 EDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRD 376

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEE 183
            G   D V Y  +V ++CKLG+VEEA EL       R    V  Y  LI G C + K+ +
Sbjct: 377 SGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVD 436

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN--------- 234
           A  +  EM +RGI+P+++TY+ ++      G  + +L +L  +  +G  PN         
Sbjct: 437 AKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIE 496

Query: 235 ----------------------IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL----- 267
                                 + ++++++ GY     T +A +L++R+ ++G L     
Sbjct: 497 GLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLAL 556

Query: 268 ---PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
              PN + Y  LI   C +G M  A  V   + E    P+V TY+ +I+G+ +   L  A
Sbjct: 557 DVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREA 616

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             I+N M   G  P+V+ YT ++    + N    A +L ++M      P+ VT+   + G
Sbjct: 617 RDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPG 676

Query: 385 LCGCGRVDWAMKLLDQMKQY 404
            C  G   +  + L++ K +
Sbjct: 677 KCNFGSRHFDNQWLEEPKLF 696



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 183/420 (43%), Gaps = 32/420 (7%)

Query: 161 FGSGVSVYNALINGLCK---EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
           F   V  Y ALI  LC+   E K++    LL E+V  G   +V+ +   I++L DV    
Sbjct: 92  FQHNVDTYAALIRVLCRWRLERKLQS---LLSEIV--GSKESVLGFD--ITALFDVLREG 144

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
                     V      I     L+K Y+  G   EA D   +  R GF+P++++ + L+
Sbjct: 145 GGEVEGEHSSVL-----ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLM 199

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           + L  +G +D AV++   ++     PN  TY   I    + GN   A  ++  M   G +
Sbjct: 200 NRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN 259

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PN V  +  ++ LC +      +  +  +   N P +T  +   I+G C   ++  A  +
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDV 319

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL----------------VTEIEKCGI 441
              M      P+   Y  L+    +   + +A  L                  E    GI
Sbjct: 320 FIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGI 379

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            L+ V YN ++  +C+ G V EA +LL +M      LD + +  +I  YC QGK+ +A  
Sbjct: 380 FLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKN 439

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + + ++  G   PDI++Y  L+ G   +G  +EA   L  +  +G+ PN AT N ++  L
Sbjct: 440 MFEEMKERG-IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 177/405 (43%), Gaps = 54/405 (13%)

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCD--------------VGNVETSLGILGQMFVR 229
           A+    ++ + G   NV TY+ +I  LC               VG+ E+ LG        
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGF------- 132

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
               +I +   +L+          +S L            ++    L+      G  DEA
Sbjct: 133 ----DITALFDVLREGGGEVEGEHSSVL------------ILVLDMLVKAYVRVGMFDEA 176

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +   +Q +     P++ + + L++   + G +  A  I+  +   G +PN   Y   +K 
Sbjct: 177 IDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKA 236

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC+   F +A  +  +M      PN VT +T+I+GLC   R D   + L  ++      +
Sbjct: 237 LCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPID 296

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              Y  ++ G     ++KEA ++  ++   GI  +   Y  ++H  C+AG +++A  L  
Sbjct: 297 TFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHN 356

Query: 470 KMLIEGTK----------------LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            M+  G K                LD + +NI++ A CK GKV  A++LL+ ++ G   +
Sbjct: 357 DMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMK-GRRMS 415

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            D++ YT+L+ G C  G + +A    ++M   GI P+  T+N+LV
Sbjct: 416 LDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILV 460



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 164/357 (45%), Gaps = 44/357 (12%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            ++ +  G+   E ++  V+++  ++G  E+A+++   ++   +   V  Y  ++     
Sbjct: 371 FKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCL 430

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           + +      ++  MK  G+EP++ TYNIL+    +N     A +LL  +G +G  P++ +
Sbjct: 431 QGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSAT 490

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSG-VSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +  I+  +C  G+V+EA           +  Y+A+++G CK +   +A+ L   +  +GI
Sbjct: 491 HNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGI 550

Query: 197 --------DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
                   +PN I Y  +I + C  G+++                               
Sbjct: 551 LRMLALDVEPNQIMYGKLIGAFCRDGDMK------------------------------- 579

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
                A  +++ ++  G  P+V+ Y+ +I+G C    + EA  +   M+E    P+V TY
Sbjct: 580 ----RAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITY 635

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           + ++DG +K  NL  A  +++ MI+ G  P++V YT ++   C     H  +  +E+
Sbjct: 636 TVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEE 692



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 121/283 (42%), Gaps = 27/283 (9%)

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK--------MAFE------ 369
           A   + ++  +G   NV  Y  +++VLC+  +  +  SL+ +        + F+      
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 370 ------------NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
                       +     +  +  +K     G  D A+  L Q K+   +P+I + N L+
Sbjct: 140 VLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLM 199

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           + L+   ++  A  +   +++ G+  N  TY   +  +CR G   EA  +  +M   G  
Sbjct: 200 NRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVN 259

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            +A+T +  I   C   + +   + L  +R    W  D  +YT+++ G C+   ++EA  
Sbjct: 260 PNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN-WPIDTFAYTAVIRGFCSEMKLKEAED 318

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
               M+NEGI P+   +  L+ +       L  V + +D+++N
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSN 361


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 162/608 (26%), Positives = 287/608 (47%), Gaps = 45/608 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ Q +++ +  +   + ++I +Y +    E++  ++ ++   G+ P V   + IL    
Sbjct: 308 VVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    ++  M   G++PN  +Y  ++ +L K+ RV  A+ L  +M  +G + D V
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + TT++  + K+G+ +EA E     L +        Y+AL++G CK  K+E A  +L +M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               + PNVIT+S+II+     G +  ++ +L +M  R   PN   +  L+ GY   G  
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ 547

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A D    M       + V +  L++ L   G MDEA S+   M      P++  Y++L
Sbjct: 548 DVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASL 607

Query: 312 IDGFAKAGNLLGASQIW----------------------------------NRMISNGCS 337
           IDG+ K GN L A  I                                   +RMI  G +
Sbjct: 608 IDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLA 667

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ + Y  ++   C       A  ++ +M      PN VT+N  I GLC  G V+ A   
Sbjct: 668 PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESA 727

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           LD+M   E +P   T+  L+    R  +  +  ++  ++   G++L++  YNT++   CR
Sbjct: 728 LDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCR 787

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            GM  +A  +L +M+  G   D +T+N +I  YC    V  A++   ++   G   P+I 
Sbjct: 788 LGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG-IAPNIT 846

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNE----GICPNFATWNVLVRSLFSNLGHLGPVYI 573
           +Y +LL G+ N+G M+E     +K+++E    G+ PN AT+++LV S +  +G+     I
Sbjct: 847 TYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV-SGYGRVGNRKKTII 905

Query: 574 LDDIMANK 581
           L   M  K
Sbjct: 906 LHIEMITK 913



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 140/555 (25%), Positives = 261/555 (47%), Gaps = 44/555 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM V G+S       +V++   +VG  ++A ++F  I +  L P    Y+ +LD   
Sbjct: 413 LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYC 472

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +  +   +   M+++ + PNV T++ ++    K   +  A  +L EM  +   P+ +
Sbjct: 473 KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTI 532

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  ++    K G+ + A +      + R      +++ L+N L +  +++EA  L+ +M
Sbjct: 533 VYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDM 592

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG------- 244
             +GIDP+++ Y+++I      GN   +L I+ +M  +    ++ ++ +L+KG       
Sbjct: 593 YSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY 652

Query: 245 ---------------------------YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
                                      Y + G+T +A D+ N M   G +PN V Y+ LI
Sbjct: 653 DPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLC  G++++A S   +M      P   T+  L+  ++++       QI  +++++G  
Sbjct: 713 GGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLE 772

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            ++  Y  ++ V C+  M  +A  ++++M       + VT+N  I+G C    V+ A+K 
Sbjct: 773 LSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKT 832

Query: 398 LDQMKQYECLPNITTYNELLDGL----LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
             QM      PNITTYN LL GL    L    ++E  +LV+E+ + G+  N  TY+ ++ 
Sbjct: 833 YSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVS 892

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G  R G   +   L  +M+ +G      T+N++I  Y K GK+  A +LL+ +   G   
Sbjct: 893 GYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRI- 951

Query: 514 PDIISYTSLLWGICN 528
           P+  +Y  L  G  N
Sbjct: 952 PNSFTYDILTCGWLN 966



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 254/546 (46%), Gaps = 15/546 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISV-INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL +M   G+ C + +  ++ +  Y R+GL + A  + Y + + G+   V   N ++D  
Sbjct: 184 LLSEMVKRGL-CFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                 S    +  N  R  ++ ++ TYN LLKA CK   +  A  L  E+       D 
Sbjct: 243 CEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +    +V+         E + L       +  Y  LI   CK   +EE+  L  +M+  G
Sbjct: 303 LKNNDVVTQ-------NEIKNLQ----PTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNG 351

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I P+V+T S+I+   C  G +  +  +  +M+  G +PN  S+ +++      GR  EA 
Sbjct: 352 IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 411

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L ++M+  G   ++V  +T++ GL   G   EA  V   + + +  PN  TYSAL+DG+
Sbjct: 412 NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 471

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G +  A  +  +M      PNV+ ++ ++    +  M  +A  ++ +M   N  PNT
Sbjct: 472 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 531

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           + +   I G    G  D A     +MK      +   ++ LL+ L RV R+ EA  L+ +
Sbjct: 532 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIID 591

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   GI  +IV Y +++ G  + G  + A  ++ +M  +  + D + +N +I    + GK
Sbjct: 592 MYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK 651

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
            +        I  G    PD I+Y +++   C  G  ++A   L +M + GI PN  T+N
Sbjct: 652 YDPRYVCSRMIELG--LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYN 709

Query: 556 VLVRSL 561
           +L+  L
Sbjct: 710 ILIGGL 715



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/598 (23%), Positives = 275/598 (45%), Gaps = 59/598 (9%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++I  Y        A   F  +R  GL PT+  +N +L    A    S +  +YS+M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 93  RDGMEPNVFTYNILLKALCK------------NNR---------------------VDGA 119
             G+ P+VF+ N+L+ +LCK            NN                      VD  
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQG 181

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALING 174
           + LL EM  +G   D+++   +V   C++G V+ A  +      G     V   N LI+G
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF------- 227
            C+   + +A  L+       +  +++TY+T++ + C  G++  +  +  ++        
Sbjct: 242 YCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 228 ------------VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
                       ++   P + ++T+L+  Y       E+  L+ +MI  G +P+VV  S+
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++G C +G + EA  +  +M E    PN  +Y+ +I+   K+G ++ A  + ++M+  G
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 421

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            S ++V  T ++  L +     +A  + E +   N  PN VT++  + G C  G+++ A 
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            +L +M++    PN+ T++ +++G  +   + +A +++ E+ +  +  N + Y  ++ G 
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 541

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            +AG    A     +M     +   + F+I++    + G+++ A  L+  +   G  +PD
Sbjct: 542 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG-IDPD 600

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           I++Y SL+ G    G    A   +Q+M  + I  +   +N L++ L   LG   P Y+
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL-RLGKYDPRYV 657



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 242/494 (48%), Gaps = 17/494 (3%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ++  + +LQ+M+ E V  +   F S+IN Y + G+  +A+ +   + +  + P
Sbjct: 473 KLGK---MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
              +Y  ++D         + +     MK   +E +   ++ILL  L +  R+D A  L+
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQ-------VEEARELAMRFGSGVSVYNALINGLC 176
           ++M +KG  PD V+Y +++    K G        V+E +E  +RF   V  YNALI GL 
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF--DVVAYNALIKGLL 647

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +  K +   ++   M++ G+ P+ ITY+TII++ C  G  E +L IL +M   G  PN  
Sbjct: 648 RLGKYDPR-YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAV 706

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  L+ G    G   +A    + M+   F+P  + +  L+     +   D+ + +  ++
Sbjct: 707 TYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKL 766

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
             +    ++T Y+ LI  F + G    A  + + M+  G S ++V Y  +++  C  +  
Sbjct: 767 VASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHV 826

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG----RVDWAMKLLDQMKQYECLPNITT 412
            +A     +M  +   PN  T+NT + GL   G     ++   KL+ +M +   +PN  T
Sbjct: 827 EKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAAT 886

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ L+ G  RV   K+   L  E+   G    + TYN ++    ++G ++EA +LL  +L
Sbjct: 887 YDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLL 946

Query: 473 IEGTKLDAITFNII 486
            +G   ++ T++I+
Sbjct: 947 TKGRIPNSFTYDIL 960



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 238/503 (47%), Gaps = 22/503 (4%)

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  +  ++   L  +RFS  +  +S+M+  G+ P +  +N LL     +  V     +  
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYS 118

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV----YNALINGLCKEHK 180
           +M   G  PD  S   +V S+CK+G ++ A    +R    V +    YN +I G C++  
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGY-LRNNDVVDIDNVTYNTVIWGFCQKGL 177

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++ F LL EMV RG+  + IT + ++   C +G V+ +  ++  +   G   ++    +
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ GY   G   +A++L     R     ++V Y+TL+   C  G +  A S+  +     
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNE----- 292

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
                      I GF K  + L  + +  +       P +V YT ++   C+     ++H
Sbjct: 293 -----------ILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL +KM      P+ VT ++ + G C  G++  A  L  +M +    PN  +Y  +++ L
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +  RV EAF L +++   GI  +IVT  T++ G+ + G   EA ++   +L      + 
Sbjct: 402 FKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNC 461

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ ++  YCK GK+  A  +L ++       P++I+++S++ G    G + +A   L+
Sbjct: 462 VTYSALLDGYCKLGKMELAELVLQKME-KEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 541 KMLNEGICPNFATWNVLVRSLFS 563
           +M+   + PN   + +L+   F 
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFK 543



 Score = 42.4 bits (98), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 14/127 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G+  +   +  +++ Y RVG  ++ + +   +   G  PT+K YN ++    
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILL-------------KALCKNNRVDGAYKLL 123
              +      + +++   G  PN FTY+IL              ++L ++  ++   KLL
Sbjct: 931 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIE-VKKLL 989

Query: 124 VEMGNKG 130
           +EMG KG
Sbjct: 990 IEMGRKG 996


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/422 (32%), Positives = 220/422 (52%), Gaps = 13/422 (3%)

Query: 151 VEEAREL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGID---PNVIT 202
            E+AR +    +R G G S+Y  N  +  + + H    A      M   G D   PN+ T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCALADVAR-HSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL-WNRM 261
           Y  +I S C  G ++     LG +  +G   +  +FT LLKG     RT +A D+   RM
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCPPNVTTYSALIDGFAKAG 319
            + G +PNV +Y+ L+ GLC      EA+ +   M ++   CPP+V +Y+ +I+GF K G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +L  A   ++ M+  G  PNVV Y+ ++  LC+     +A  ++  M      PN  T+N
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + + G C  G+   A+  L +M      P++ TYN L+D L +  R  EA ++   + K 
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G++  I TY T+L G    G +VE   LL  M+  G   +   F+I+I AY KQGKV+ A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +  ++R  G  NPD ++Y +++  +C SG +++A  Y ++M++E + P    +N L+ 
Sbjct: 394 MLVFSKMRQQG-LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIH 452

Query: 560 SL 561
           SL
Sbjct: 453 SL 454



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 205/433 (47%), Gaps = 47/433 (10%)

Query: 28  CSEGVFISVINSYRRVGLAEQAL----KMFYRIREFGLKPTVKIYNHILDALLAENRFS- 82
           C+ G+ I       R+ L   AL    K  +R+      P       +L  L A+ R S 
Sbjct: 92  CTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP-------LLKGLCADKRTSD 144

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTT 140
            ++ +   M + G  PNVF+YNILLK LC  NR   A +LL  M + G  C PD VSYTT
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           +                              ING  KE  +++A+    EM+DRGI PNV
Sbjct: 205 V------------------------------INGFFKEGDLDKAYGTYHEMLDRGILPNV 234

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +TYS+II++LC    ++ ++ +L  M   G  PN  ++ S++ GY   G+  EA     +
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M  +G  P+VV Y++L+  LC NG   EA  +   M +    P +TTY  L+ G+A  G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+    + + M+ NG  PN   ++ ++    +     QA  +  KM  +   P+TVT+ T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I  LC  GRV+ AM+  +QM      P    YN L+  L   ++  +A +      KC 
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFL---KCW 471

Query: 441 IQLNIVTYNTILH 453
           I+  + T  +++ 
Sbjct: 472 IEAFVWTLFSLIQ 484



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 216/459 (47%), Gaps = 35/459 (7%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME---PNVFT 102
           AE A  +F  +   G   ++   N  L A +A +  +     Y+ M R G +   PN+ T
Sbjct: 35  AEDARHVFDELLRRGRGASIYGLNCAL-ADVARHSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           Y IL+ + C   R+D  +  L  +  KG   DA+++T ++  +C   +  +A ++ +R  
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR-- 151

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                                       M   G  PNV +Y+ ++  LCD    + +L +
Sbjct: 152 ---------------------------RMTQLGCIPNVFSYNILLKGLCDENRSQEALEL 184

Query: 223 LGQMFVRG--CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
           L  M   G  C P++ S+T+++ G+   G   +A   ++ M+  G LPNVV YS++I  L
Sbjct: 185 LQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAAL 244

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C   +MD+A+ V   M +N   PN  TY++++ G+  +G    A     +M S+G  P+V
Sbjct: 245 CKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDV 304

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++  LC+N    +A  + + M      P   T+ T ++G    G +     LLD 
Sbjct: 305 VTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +    PN   ++ L+    +  +V +A  + +++ + G+  + VTY T++  +C++G 
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGR 424

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           V +A +   +M+ E      I +N +I++ C   K + A
Sbjct: 425 VEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 7/280 (2%)

Query: 17  LLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           LLQ M  +G  C   V  + +VIN + + G  ++A   ++ + + G+ P V  Y+ I+ A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L           + ++M ++G+ PN  TYN ++   C + +   A   L +M + G  PD
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y +++  +CK G+  EAR++            ++ Y  L+ G   +  + E   LL 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  GI PN   +S +I +    G V+ ++ +  +M  +G NP+  ++ +++      G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           R  +A   + +MI E   P  + Y++LIH LC     D+A
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKA 463



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 328 WNRMISNGC---SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +NRM   G    +PN+  Y  ++   C         + +  +  +    + + F   +KG
Sbjct: 76  YNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 135

Query: 385 LCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG--I 441
           LC   R   AM + L +M Q  C+PN+ +YN LL GL   NR +EA EL+  +   G   
Sbjct: 136 LCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDC 195

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++V+Y T+++G  + G + +A+    +ML  G   + +T++ II A CK   ++ A++
Sbjct: 196 PPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAME 255

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L  +   G   P+  +Y S++ G C+SG  +EA  +L+KM ++G+ P+  T+N L+  L
Sbjct: 256 VLTSMVKNGVM-PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYL 314

Query: 562 FSN 564
             N
Sbjct: 315 CKN 317



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 123/263 (46%), Gaps = 5/263 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D       +M   G+  +   + S+I +  +    ++A+++   + + G+ P  + YN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+    +  +          M  DG+EP+V TYN L+  LCKN R   A K+   M  +
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEA 184
           G  P+  +Y T++      G + E     +L +R G      V++ LI    K+ K+++A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M  +G++P+ +TY T+I  LC  G VE ++    QM     +P    + SL+  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 245 YLLGGRTHEASDLWNRMIREGFL 267
             +  +  +A D + +   E F+
Sbjct: 454 LCIFDKWDKAKDYFLKCWIEAFV 476


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 246/481 (51%), Gaps = 17/481 (3%)

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           P+   +++ G+ P+    N +L  L     +D A +L   + +K    +  SY  ++  +
Sbjct: 221 PLLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLKVL 272

Query: 146 CKLGQVEEARELAMRFGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           C  G+VE+AR+L     S   V  Y  LI+G C   ++E A  LL +MV RG++PN   Y
Sbjct: 273 CGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVY 332

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +++++ LCD G V  +L ++  M       +   +T++L G+   G    A   ++ M R
Sbjct: 333 TSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQR 392

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G   + V Y+TLI+GLC  G + EA  V  +M       +  TY+ L+DG+ K G +  
Sbjct: 393 KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAE 452

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A Q+ N M+  G +PNVV YT +   LC+      A+ L+ +M+ +    N  T+N+ I 
Sbjct: 453 AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 512

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G +D AM+ +  M      P++ TY  L+D L +   +  A +L+ E+   GI+ 
Sbjct: 513 GLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKP 572

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            IVTYN +++G C +G V    +LL  ML +    +A T+N ++  YC    + N ++  
Sbjct: 573 TIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC----IGNNMKST 628

Query: 504 DRIRGG---GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
             I  G       P+  +Y  L+ G C +  M+EA  +  +M+ +G     ++++ L+R 
Sbjct: 629 TEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRL 688

Query: 561 L 561
           L
Sbjct: 689 L 689



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 256/509 (50%), Gaps = 17/509 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++++  G+S S     +V++   R+ L ++A+++F  + +      V  YN +L  L 
Sbjct: 222 LLRRVRQYGISPSPEACNAVLS---RLPL-DEAIELFQGLPD----KNVCSYNILLKVLC 273

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      ++  M      P+V TY IL+   C    ++ A KLL +M  +G  P+A 
Sbjct: 274 GAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNAT 330

Query: 137 SYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YT++V+ +C  G+V +A  +       +     +VY  +++G C +  +  A     EM
Sbjct: 331 VYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEM 390

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+  + +TY+T+I+ LC  G ++ +  +L +M  R  + +  ++T L+ GY   G+ 
Sbjct: 391 QRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKM 450

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  + N M++ G  PNVV Y+ L  GLC  G +  A  + ++M       N  TY++L
Sbjct: 451 AEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  KAG L  A +    M + G  P+V  YT ++  LC++    +AH L+++M     
Sbjct: 511 INGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGI 570

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P  VT+N  + G C  GRV+   KLL+ M +    PN TTYN L+      N +K   E
Sbjct: 571 KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTE 630

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +   +    ++ N  TYN ++ G C+A  + EA     +M+ +G +L A +++ +I    
Sbjct: 631 IYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLN 690

Query: 492 KQGKVNNAIQLLDRIRGGG-EWNPDIISY 519
           K+ K   A +L   +R  G    PD+ ++
Sbjct: 691 KKKKFVEARKLFHDMRKEGFTAEPDVYNF 719



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 173/383 (45%), Gaps = 5/383 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L +K  +     +++ M    V   E V+ +V++ +   G    A + F  ++  GL   
Sbjct: 339 LCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 398

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              Y  +++ L           +   M    ++ +  TY +L+   CK  ++  A+++  
Sbjct: 399 GVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHN 458

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
            M  +G AP+ V+YT +   +CK G V+ A EL     +         YN+LINGLCK  
Sbjct: 459 TMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 518

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            +++A   + +M   G+ P+V TY+T+I +LC  G ++ +  +L +M   G  P I ++ 
Sbjct: 519 YLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYN 578

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+ G+ + GR      L   M+ +   PN   Y++L+   C   +M     +   M   
Sbjct: 579 VLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSR 638

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +  PN  TY+ LI G  KA ++  A    N MI  G      +Y+ ++++L +   F +A
Sbjct: 639 NVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEA 698

Query: 360 HSLIEKMAFENCPPNTVTFNTFI 382
             L   M  E        +N +I
Sbjct: 699 RKLFHDMRKEGFTAEPDVYNFYI 721



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 5/318 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    E+   + +LQ+M    +   E  +  +++ Y + G   +A ++   + + G
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  + D L  +      N +   M   G+E N  TYN L+  LCK   +D A 
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           + + +M   G  PD  +YTT++ ++CK G+++ A +L            +  YN L+NG 
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++E    LL  M+++ I PN  TY++++   C   N++++  I   M  R   PN 
Sbjct: 585 CMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNE 644

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  L+KG+       EA    N MI +GF     +YS LI  L       EA  + + 
Sbjct: 645 NTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHD 704

Query: 296 MEENSCPPNVTTYSALID 313
           M +         Y+  ID
Sbjct: 705 MRKEGFTAEPDVYNFYID 722



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 158/308 (51%), Gaps = 12/308 (3%)

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           ++ L  R+ + G  P+  A + ++  L     +DEA+ +   + +     NV +Y+ L+ 
Sbjct: 219 SAPLLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLK 270

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
               AG +  A Q+++ M S    P+VV Y  ++   C       A  L++ M      P
Sbjct: 271 VLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N   + + +  LC  GRV  A+ +++ M  ++ + +   Y  +L G      +  A    
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E+++ G+  + VTY T+++G+CRAG + EA ++L +ML     +D +T+ +++  YCK+
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           GK+  A Q+ + +   G   P++++YT+L  G+C  G +Q A   L +M N+G+  N  T
Sbjct: 448 GKMAEAFQVHNTMVQRG-VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506

Query: 554 WNVLVRSL 561
           +N L+  L
Sbjct: 507 YNSLINGL 514


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/599 (24%), Positives = 289/599 (48%), Gaps = 42/599 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG++  +     +   ++ +G S     + S+I+++   G   +A+ +F ++ E G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238

Query: 61  LKPTVKIYNHILDAL-LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            KPT+  YN IL+        ++ I  +   MK DG+ P+ +TYN L+    + +    A
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALING 174
            ++  EM   G + D V+Y  ++    K  + +EA     E+ +  F   +  YN+LI+ 
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             ++  ++EA  L  +M ++G  P+V TY+T++S     G VE+++ I  +M   GC PN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +F + +K Y   G+  E   +++ +   G  P++V ++TL+     NG   E   V  
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P   T++ LI  +++ G+   A  ++ RM+  G +P++  Y  ++  L +  
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG--------------------------- 387
           M+ Q+  ++ +M    C PN +T+ + +                                
Sbjct: 539 MWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLK 598

Query: 388 -----CGRVDW---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
                C + D    A +   ++K+    P+ITT N ++    R   V +A  ++  +++ 
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   ++ TYN++++   R+    ++ ++L ++L +G K D I++N +IYAYC+  ++ +A
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            ++   +R  G   PD+I+Y + +         +EA   ++ M+  G  PN  T+N +V
Sbjct: 719 SRIFSEMRNSG-IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/581 (23%), Positives = 262/581 (45%), Gaps = 48/581 (8%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           K E  S     F+  +  +++  LA +A   F + +++       +   I+  L  E R 
Sbjct: 130 KPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRV 189

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
           S    +++ ++ DG   +V++Y  L+ A   + R   A  +  +M   GC P  ++Y  I
Sbjct: 190 SSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVI 249

Query: 142 VSSICKLGQ--------VEEARELAMRFGSGVSVYNALINGLCKEHKI-EEAFWLLCEMV 192
           ++   K+G         VE+ +   +        YN LI   CK   + +EA  +  EM 
Sbjct: 250 LNVFGKMGTPWNKITSLVEKMKSDGI--APDAYTYNTLIT-CCKRGSLHQEAAQVFEEMK 306

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G   + +TY+ ++         + ++ +L +M + G +P+I ++ SL+  Y   G   
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA +L N+M  +G  P+V  Y+TL+ G    G ++ A+S+  +M    C PN+ T++A I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             +   G      +I++ +   G SP++V +  ++ V  QN M  +   + ++M      
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P   TFNT I     CG  + AM +  +M      P+++TYN +L  L R    +++ ++
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546

Query: 433 VTEIEKCGIQLNIVTYNTILHG----------------------------------VC-R 457
           + E+E    + N +TY ++LH                                   VC +
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
             ++ EA +   ++   G   D  T N ++  Y ++  V  A  +LD ++  G + P + 
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG-FTPSMA 665

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +Y SL++    S    ++   L+++L +GI P+  ++N ++
Sbjct: 666 TYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/534 (22%), Positives = 240/534 (44%), Gaps = 40/534 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +  L+++MK +G++     + ++I   +R  L ++A ++F  ++  G       YN +LD
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                +R      + + M  +G  P++ TYN L+ A  ++  +D A +L  +M  KG  P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFG---SGVSVYNALINGLCKEHKIEEAFWLL 188
           D  +YTT++S   + G+VE A  +   MR       +  +NA I       K  E   + 
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E+   G+ P+++T++T+++     G      G+  +M   G  P   +F +L+  Y   
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A  ++ RM+  G  P++  Y+T++  L   G  +++  V  +ME+  C PN  TY
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562

Query: 309 SALIDGFA-----------------------------------KAGNLLGASQIWNRMIS 333
            +L+  +A                                   K   L  A + ++ +  
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G SP++     MV +  +  M  +A+ +++ M      P+  T+N+ +           
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           + ++L ++      P+I +YN ++    R  R+++A  + +E+   GI  +++TYNT + 
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
                 M  EA  ++  M+  G + +  T+N I+  YCK  + + A   ++ +R
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 3/321 (0%)

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           GR   A++++N +  +GF  +V +Y++LI    ++G   EAV+V  +MEE+ C P + TY
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246

Query: 309 SALIDGFAKAGNLLGA-SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           + +++ F K G      + +  +M S+G +P+   Y  ++    + ++  +A  + E+M 
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                 + VT+N  +       R   AMK+L++M      P+I TYN L+    R   + 
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA EL  ++ + G + ++ TY T+L G  RAG V  A  +  +M   G K +  TFN  I
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             Y  +GK    +++ D I   G  +PDI+++ +LL     +G   E     ++M   G 
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCG-LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485

Query: 548 CPNFATWNVLVRSLFSNLGHL 568
            P   T+N L+ S +S  G  
Sbjct: 486 VPERETFNTLI-SAYSRCGSF 505



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/400 (20%), Positives = 182/400 (45%), Gaps = 9/400 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++    + ++M+  G   +   F + I  Y   G   + +K+F  I   GL P +  +N
Sbjct: 399 KVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L         S ++ ++  MKR G  P   T+N L+ A  +    + A  +   M + 
Sbjct: 459 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA 518

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEA 184
           G  PD  +Y T+++++ + G  E++ ++      G        Y +L++      +I   
Sbjct: 519 GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLM 578

Query: 185 FWLLCEMVDRGIDPNVITYST--IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
             L  E+    I+P  +   T  ++ S CD+  +  +     ++  RG +P+I +  S++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL--LPEAERAFSELKERGFSPDITTLNSMV 636

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             Y       +A+ + + M   GF P++  Y++L++    +    ++  +  ++      
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P++ +Y+ +I  + +   +  AS+I++ M ++G  P+V+ Y   +     ++MF +A  +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +  M    C PN  T+N+ + G C   R D A   ++ ++
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 171/371 (46%), Gaps = 5/371 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            I+  G + +   +  +  ++ V G+S     + +++  + + G+  +   +F  ++  G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P  + +N ++ A      F     +Y  M   G+ P++ TYN +L AL +    + + 
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGL 175
           K+L EM +  C P+ ++Y +++ +     ++     LA    SGV      +   L+   
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   + EA     E+ +RG  P++ T ++++S       V  + G+L  M  RG  P++
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+  +       ++ ++   ++ +G  P++++Y+T+I+  C N  M +A  +  +
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   P+V TY+  I  +A       A  +   MI +GC PN   Y  +V   C+ N 
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784

Query: 356 FHQAHSLIEKM 366
             +A   +E +
Sbjct: 785 KDEAKLFVEDL 795


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/458 (30%), Positives = 234/458 (51%), Gaps = 10/458 (2%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNIL 106
           +A+ +FY+I+    +PT + YN ++  L+ E ++  ++ +Y+ M  +G   P+  TY+ L
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSAL 236

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF--- 161
           + A CK  R D A +LL EM   G  P A  YT I+S   KL  V  A  L   MR+   
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC 296

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  Y  LI GL K  +I+EA+    EM      P+ +  + +I+ L   G ++  L 
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLK 356

Query: 222 ILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
           +  +M V  C PN+ ++ +++K  +    R  E    + RM   G  P+   YS LI G 
Sbjct: 357 LFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGF 416

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    +++A+ +  +M+E   PP    Y +LID   KA     A +++  +  N  S + 
Sbjct: 417 CKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSA 476

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             Y  M+K L +      A +L ++M+   C PN   +N  + GL     +D A+  + +
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRK 536

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M+++ CLP+I +YN +L+GL +      A E++T ++   I+ + V+YNT+L  +  AGM
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             EA +L+ +M   G + D IT++ I+ A    GKV+ 
Sbjct: 597 FEEAAELMKEMNALGFEYDLITYSSILEAI---GKVDQ 631



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 224/463 (48%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +++ L     +  A  +  ++  + C P A +Y +++  +   GQ E+  EL     +  
Sbjct: 165 VIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG 224

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+  CK  + + A  LL EM + G+ P    Y+ IIS    + NV  +
Sbjct: 225 HCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L +  +M    C P++ ++T L++G    GR  EA   ++ M RE   P+ V  + +I+ 
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINF 344

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +D+ + +  +M  + C PNV TY+ +I    ++ + +     W  RM  +G SP
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R D A +L 
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++  L +  R+ +A  L  E+ K G   N+  YN ++ G+ RA
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARA 524

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            M+ EA   + KM   G   D  ++NII+    K G  + A+++L  ++      PD +S
Sbjct: 525 CMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNST-IKPDAVS 583

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  + ++G  +EA   +++M   G   +  T++ ++ ++
Sbjct: 584 YNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAI 626



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 210/432 (48%), Gaps = 7/432 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L  + + + V  L  +M  EG    + V + ++I+++ ++G  + A+++   ++E 
Sbjct: 200 MIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKEN 259

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++PT KIY  I+      +       ++  M+     P+VFTY  L++ L K  R+D A
Sbjct: 260 GMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEA 319

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALING 174
           Y    EM  + C PD V    +++ + K G++++  +L    G       V  YN +I  
Sbjct: 320 YHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKA 379

Query: 175 LCK-EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           L + + ++ E F     M   GI P+  TYS +I   C    +E ++ +L +M  +G  P
Sbjct: 380 LFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPP 439

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL+       R   A +L+  +       +   Y+ +I  L   G +D+A+++ 
Sbjct: 440 CPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLF 499

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +  C PNV  Y+AL+ G A+A  L  A     +M  +GC P++ +Y  ++  L + 
Sbjct: 500 DEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKT 559

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H+A  ++  M      P+ V++NT +  L   G  + A +L+ +M       ++ TY
Sbjct: 560 GGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITY 619

Query: 414 NELLDGLLRVNR 425
           + +L+ + +V++
Sbjct: 620 SSILEAIGKVDQ 631



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 193/408 (47%), Gaps = 9/408 (2%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGIL 223
              YN++I  L  E + E+   L  EM + G   P+ +TYS +IS+ C +G  ++++ +L
Sbjct: 194 AQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLL 253

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P    +T ++  +      H A  L+  M      P+V  Y+ LI GL   
Sbjct: 254 NEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKA 313

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G +DEA    ++M+   C P+    + +I+   KAG L    +++  M  + C PNVV Y
Sbjct: 314 GRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTY 373

Query: 344 TCMVKVLCQN-NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
             ++K L ++ +   +  S  E+M      P+  T++  I G C   R++ AM LL++M 
Sbjct: 374 NTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMD 433

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMV 461
           +    P    Y  L+D L +  R   A EL  E+ E CG     V Y  ++  + +AG +
Sbjct: 434 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARV-YAVMIKHLGKAGRL 492

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A  L  +M   G   +   +N ++    +   ++ A+  + +++  G   PDI SY  
Sbjct: 493 DDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCL-PDINSYNI 551

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           +L G+  +GG   A   L  M N  I P+  ++N    ++ S L H G
Sbjct: 552 ILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYN----TVLSALSHAG 595



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 102/238 (42%), Gaps = 37/238 (15%)

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C    +  +  I+ L     +  A+ +  Q+K  +C P    YN ++  L+   + ++  
Sbjct: 155 CVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVH 214

Query: 431 ELVTEIEKCG-IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           EL  E+   G    + VTY+ ++   C+ G    A +LL +M   G +  A  + +II  
Sbjct: 215 ELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISL 274

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM------- 542
           + K   V+ A+ L + +R      PD+ +YT L+ G+  +G + EA+ +  +M       
Sbjct: 275 FFKLDNVHGALSLFEEMRYM-YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKP 333

Query: 543 -----------------LNEGI-----------CPNFATWNVLVRSLFSNLGHLGPVY 572
                            L++G+            PN  T+N ++++LF +   +  V+
Sbjct: 334 DTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVF 391



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 32/161 (19%), Positives = 75/161 (46%), Gaps = 2/161 (1%)

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTILHGVCRAGMVVEAFQL 467
           + +TY  L+  L  V +  E ++++ E+ +  I  +  +  + ++  +  A M+ +A  +
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITI 181

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             ++     +  A  +N +I     +G+     +L + +   G  +PD ++Y++L+   C
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFC 241

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
             G    A   L +M   G+ P    + +++ SLF  L ++
Sbjct: 242 KLGRQDSAIRLLNEMKENGMQPTAKIYTMII-SLFFKLDNV 281


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 226/444 (50%), Gaps = 17/444 (3%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N IL +L+    +  +  +   M+ +G+ PN  T+NIL+   C+   +  A+ +L ++ 
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIE 182
             G  PD ++  T +   C  GQ+ +A     + +A+ F      Y  LINGLCK  +  
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  LL  +  + +  N + Y+T+I  +    +V  +  +  +M  +  +P++ ++++L+
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           +G+ + G+  +A DL+N+MI E   P+V  ++ L+ G C  G + +A +V   M      
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PNV+T++ L+DGF K   +     ++  M+  G  PNVV Y  ++   C     ++A  +
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
              M+      N  ++N  I G C   +VD AMKL  +M     +P++ TYN L+DGL +
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCK 430

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             ++  AF+LV E+   G   NI+TYN+IL+             LL K+  +G + +  T
Sbjct: 431 SGKISYAFQLVNEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHT 478

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRI 506
             I+I   C+ GK+  A ++ + +
Sbjct: 479 DTILIKGLCQSGKLEAARKVFEDL 502



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 213/402 (52%), Gaps = 1/402 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N ++  L K         L  +M   GI+PN +T++ +I+  C +G +  +  +L ++ 
Sbjct: 71  FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+I +  + +KG+ L G+ H+A +  ++++  GF  + V+Y TLI+GLC  G   
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+ +  +++      N   Y+ +IDG +K  ++  A  +++ M++   SP+VV Y+ ++
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
           +          A  L  KM  EN  P+  TFN  + G C  GR+  A  +LD M   +  
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN++T+N L+DG  +  ++KE   +   + K GI+ N+VTY +++ G C    V +A ++
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKI 370

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              M   G   +  ++NI+I  +CK  KV+ A++L   +       PD+++Y SL+ G+C
Sbjct: 371 FNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMH-HKHIIPDVVTYNSLIDGLC 429

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
            SG +  AF  + +M + G  PN  T+N ++ +L + L   G
Sbjct: 430 KSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQG 471



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 235/470 (50%), Gaps = 17/470 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++DG   L   +  +  + +   F  ++ S  +       L +  ++   G+ P    +N
Sbjct: 48  DVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFN 107

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++             + + + + G EP++ T N  +K  C   ++  A     ++   
Sbjct: 108 ILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVAL 167

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEA 184
           G   D VSY T+++ +CK+G+   A +L  R    +      +YN +I+G+ K+  + +A
Sbjct: 168 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDA 227

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EMV + I P+V+TYS +I     VG ++ ++ +  +M +    P++++F  L+ G
Sbjct: 228 FDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 287

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   GR  +A ++ + M+ +   PNV  ++TL+ G C +  M E  +V   M +    PN
Sbjct: 288 FCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY +L+DG+     +  A +I+N M   G + NV +Y  M+   C+     +A  L  
Sbjct: 348 VVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFI 407

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  ++  P+ VT+N+ I GLC  G++ +A +L+++M      PNI TYN +L+ LL   
Sbjct: 408 EMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL--- 464

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
                    T+++  GIQ N+ T   ++ G+C++G +  A ++   +L++
Sbjct: 465 ---------TKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 150/301 (49%), Gaps = 1/301 (0%)

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L+N ++ +        ++ ++  L  +      +S+S QME     PN  T++ LI+
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
            F + G +  A  +  +++  G  P+++     +K  C     HQA +  +K+       
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 171

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + V++ T I GLC  G    A++LL ++       N   YN ++DG+ +   V +AF+L 
Sbjct: 172 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLY 231

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           +E+    I  ++VTY+ ++ G    G + +A  L  KM++E  K D  TFNI++  +CK+
Sbjct: 232 SEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKE 291

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           G++  A  +LD +    +  P++ ++ +L+ G C    M+E       M+ +GI PN  T
Sbjct: 292 GRLKKAKNVLDMMM-IQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVT 350

Query: 554 W 554
           +
Sbjct: 351 Y 351



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 170/363 (46%), Gaps = 2/363 (0%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           +  N I YS+I S+     +V+ ++ +   +  +        F  +L   +     H   
Sbjct: 30  LQKNFIPYSSI-STTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L  +M  EG  PN V ++ LI+  C  G +  A SV  ++ +    P++ T +  I GF
Sbjct: 89  SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
              G +  A    +++++ G   + V+Y  ++  LC+      A  L+ ++  +    N 
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V +NT I G+     V+ A  L  +M      P++ TY+ L+ G   V ++K+A +L  +
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNK 268

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +    I+ ++ T+N ++ G C+ G + +A  +L  M+I+  K +  TFN ++  +CK  K
Sbjct: 269 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRK 328

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           +     +   +   G   P++++Y SL+ G C    + +A      M   G+  N  ++N
Sbjct: 329 MKEGKTVFAMMMKQG-IKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYN 387

Query: 556 VLV 558
           +++
Sbjct: 388 IMI 390



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 147/297 (49%), Gaps = 17/297 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ + +   ++    L  +M  + +S     + ++I  +  VG  + A+ +F ++    
Sbjct: 214 VIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILEN 273

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  +N ++D    E R      +   M    ++PNV T+N L+   CK+ ++    
Sbjct: 274 IKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGK 333

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE----LAMR-FGSGVSVYNALINGL 175
            +   M  +G  P+ V+Y +++   C + QV +A++    ++ R   + V  YN +ING 
Sbjct: 334 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGF 393

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  K+++A  L  EM  + I P+V+TY+++I  LC  G +  +  ++ +M  RG  PNI
Sbjct: 394 CKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNI 453

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++ S+L              L  ++  +G  PN+   + LI GLC +G ++ A  V
Sbjct: 454 ITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKV 498


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 236/507 (46%), Gaps = 60/507 (11%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKL-LVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + G+  +   +  LL+ LC   R   A  + L  M   GC PD  SY+T++  +C   + 
Sbjct: 41  KTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKC 100

Query: 152 EEARELAMRFGSG-------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           EEA EL              V  Y+ +I+G  KE  + +A+ L C+M+D GI PNV+T +
Sbjct: 101 EEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCN 160

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           ++I  LC V  ++ +  +L QM      PN  ++ SL+ GYL  G+  EA  +   M R+
Sbjct: 161 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 220

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  PNVV Y+ LI  LC +G   EA  +   M ++   P+ TTY +L+ G+A  GNL+  
Sbjct: 221 GQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEM 280

Query: 325 SQIWNRMISNGCS-----------------------------------PNVVAYTCMVKV 349
           + + + M+ NG                                     P++V YT ++  
Sbjct: 281 NNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDG 340

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC+      A S   +M  +   PN +TF T I G    G+ + A +L  +M      P+
Sbjct: 341 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPD 400

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +T +  ++D L +  +V EA +L   + + G + N+V+YNT++HG   AG V E  +LL 
Sbjct: 401 VTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 460

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            ML+ G K  A+TFN ++      G                   PD+ +  +L+   C  
Sbjct: 461 DMLLIGLKPTAVTFNTLLDGMVSMG-----------------LKPDVDTCKTLIDSCCED 503

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNV 556
           G +++     ++ML +    +  T N+
Sbjct: 504 GRIEDILTLFREMLGKADKTDTITENI 530



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 208/376 (55%), Gaps = 5/376 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           + + P++ T+  +IS  CD G +      LGQ+   G   +  +FT LL+      RT +
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 254 ASDL-WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCPPNVTTYSA 310
           A ++   RM   G  P+V +YSTL+ GLC+    +EA  + + M E+  +CPP+V +YS 
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I GF K G++  A  ++ +M+ +G  PNVV    ++  LC+     +A +++++M  E+
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+N+ I G    G+   A+++L +M +    PN+ TYN L+D L +     EA 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           E+   + + G + +  TY ++LHG    G +VE   +   M+  G + +  TF+I IYAY
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAY 306

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK G+++ A     +++  G + PDI++YT+++ G+C  G + +A     +M+++G+ PN
Sbjct: 307 CKCGRLDEASLTFIKMQQLG-FMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPN 365

Query: 551 FATWNVLVRSLFSNLG 566
             T+  L+   FS  G
Sbjct: 366 IITFTTLIHG-FSMYG 380



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 213/473 (45%), Gaps = 58/473 (12%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG--MEPNVFTYNILLKALCK 112
           R+ E G  P V  Y+ +L  L AE +      +   M  DG    P+V +Y+ ++    K
Sbjct: 74  RMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFK 133

Query: 113 NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSV 167
              V  AY L  +M + G  P+ V+  +++  +CK+  +++A  +  +          + 
Sbjct: 134 EGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTT 193

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN+LI+G     +  EA  +L EM   G  PNV+TY+ +I  LC  G    +  I   M 
Sbjct: 194 YNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMI 253

Query: 228 VRGCNPNIHSFTSLLKGYLLG-----------------------------------GRTH 252
             G  P+  ++ SLL GY                                      GR  
Sbjct: 254 QSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLD 313

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EAS  + +M + GF+P++V Y+T+I GLC  G +D+A+S   QM ++   PN+ T++ LI
Sbjct: 314 EASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLI 373

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            GF+  G    A +++  M+  G  P+V  +T M+  L +     +A  L + M      
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAK 433

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN V++NT I G    G V   MKLLD M      P   T+N LLDG++ +         
Sbjct: 434 PNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM--------- 484

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
                  G++ ++ T  T++   C  G + +   L  +ML +  K D IT NI
Sbjct: 485 -------GLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 530



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 210/456 (46%), Gaps = 31/456 (6%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           +KCE      L+  M  +G +C   V  + +VI+ + + G   +A  +F ++ + G+ P 
Sbjct: 98  KKCE--EAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPN 155

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V   N ++D L           +   M  + + PN  TYN L+     + +   A ++L 
Sbjct: 156 VVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILK 215

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV--------SVYNALINGLC 176
           EM   G  P+ V+Y  ++  +CK G   EARE+   F S +        + Y +L++G  
Sbjct: 216 EMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI---FNSMIQSGPKPDATTYGSLLHGYA 272

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
            E  + E   +   MV  G+  N  T+S  I + C  G ++ +     +M   G  P+I 
Sbjct: 273 TEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIV 332

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++T+++ G    GR  +A   + +MI +G  PN++ ++TLIHG    G  ++A  + Y+M
Sbjct: 333 TYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEM 392

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +   PP+VT ++A+ID   K G +  A ++++ M   G  PNVV+Y  M+         
Sbjct: 393 MDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 452

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +   L++ M      P  VTFNT + G+     V   +K           P++ T   L
Sbjct: 453 GEVMKLLDDMLLIGLKPTAVTFNTLLDGM-----VSMGLK-----------PDVDTCKTL 496

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           +D      R+++   L  E+     + + +T N  L
Sbjct: 497 IDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 11/202 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D       QM  +G+S +   F ++I+ +   G  E+A ++FY + + G
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 396

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V I+  ++D L  E + +    ++  M R G +PNV +YN ++        V    
Sbjct: 397 IPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 456

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KLL +M   G  P AV++ T++  +  +G               V     LI+  C++ +
Sbjct: 457 KLLDDMLLIGLKPTAVTFNTLLDGMVSMG-----------LKPDVDTCKTLIDSCCEDGR 505

Query: 181 IEEAFWLLCEMVDRGIDPNVIT 202
           IE+   L  EM+ +    + IT
Sbjct: 506 IEDILTLFREMLGKADKTDTIT 527


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 252/506 (49%), Gaps = 7/506 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PT+  YN ++D     +R  +   ++  + R G+ P+V +YN L+    K   VD AY+L
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQ-VEEARELAMRFGSGV----SVYNALINGLCK 177
             +M  +  +PD V+Y +++  +CK  + V+  R L     +G+      YN+LI G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
               +E+  +  EM   G+ P V+  ++ I +LC    ++ +  I   M ++G  PNI S
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +++LL GY   G     + L N M+ +G +PN   ++ LI+     G MD+A+ +   M+
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P+  T++ +I    + G L  A   +N M+  G  P+   Y C+++  C +    
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 358 QAHSLIEKMAFENCPPNTVT-FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           +A  LI +M  ++ PP  V  F++ I  L   GRV     ++D M Q    PN+ T+N L
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++G   V  ++EAF L+  +   GI+ N   Y T++ G C+ G + +A  +   ML +G 
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV 539

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           K  ++ +NII++   +  +   A ++   +   G     I +Y  +L G+C +    EA 
Sbjct: 540 KPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGT-TVSIQTYGVVLGGLCRNNCTDEAN 598

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLF 562
           + L+K+    +  +  T+N+++ ++ 
Sbjct: 599 MLLEKLFAMNVKFDIITFNIVISAML 624



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 255/571 (44%), Gaps = 48/571 (8%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+ YRR+   E AL +F R+   GL P V  YN ++D    E        ++  M    
Sbjct: 128 LIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQS 187

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+V TYN L+  LCK   +  + ++L +M + G  P+  +Y +++      G  +E+ 
Sbjct: 188 VSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESV 247

Query: 156 ELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            +     S      V   N+ I+ LC+ ++I+EA  +   MV +G  PN+I+YST++   
Sbjct: 248 RVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGY 307

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
              G       ++  M  +G  PN   F  L+  Y   G   +A  ++  M  +G +P+ 
Sbjct: 308 AAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDT 367

Query: 271 VAYSTLIHGLCSNGSMDEAVS------------------------------------VSY 294
           V ++T+I  LC  G +D+A+                                     +S 
Sbjct: 368 VTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISE 427

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M ++  PP V  +S++I+   K G +     I + M+  G  PNVV +  +++  C   
Sbjct: 428 MMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG 487

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A +L++ MA     PN   + T + G C  GR+D A+ +   M      P    YN
Sbjct: 488 NMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYN 547

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            +L GL +  R   A ++  E+ + G  ++I TY  +L G+CR     EA  LL K+   
Sbjct: 548 IILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAM 607

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             K D ITFNI+I A  K G+   A +L   I   G   P + +Y  ++  +      +E
Sbjct: 608 NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG-LVPTVHTYNLMISNLIKEESYEE 666

Query: 535 A---FIYLQKMLNEGICPNFATWNVLVRSLF 562
           A   FI ++K    G  P+    N +VR L 
Sbjct: 667 ADNLFISVEK---SGRAPDSRLLNHIVRMLL 694



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 261/544 (47%), Gaps = 41/544 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  E+   + +L+QM   G+  +   + S+I  Y   G+ ++++++F  +   G
Sbjct: 198 LIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 257

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL------------- 107
           L P V   N  + AL   NR      I+ +M   G +PN+ +Y+ LL             
Sbjct: 258 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMN 317

Query: 108 --------KALCKNNR--------------VDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                   K +  N+R              +D A  +  +M NKG  PD V++ T++SS+
Sbjct: 318 SLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 377

Query: 146 CKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C++G++++A  +       GV    +VY  LI G C   ++ +A  L+ EM+++ I P  
Sbjct: 378 CRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPG 437

Query: 201 ITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           + Y S+II++L   G V     I+  M   G  PN+ +F SL++GY L G   EA  L +
Sbjct: 438 VKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 497

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M   G  PN   Y TL+ G C NG +D+A++V   M      P    Y+ ++ G  +A 
Sbjct: 498 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQAR 557

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +TFN
Sbjct: 558 RTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 617

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I  +   GR   A +L   +  Y  +P + TYN ++  L++    +EA  L   +EK 
Sbjct: 618 IVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKS 677

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   +    N I+  + +   V +A   L  +      L+A T +++   + ++GK    
Sbjct: 678 GRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREH 737

Query: 500 IQLL 503
           I+LL
Sbjct: 738 IKLL 741



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/572 (24%), Positives = 261/572 (45%), Gaps = 8/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   ++ E+D    L  +M  + VS     + S+I+   +     ++ ++  ++ + G
Sbjct: 163 LIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG 222

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P  K YN ++        +     ++  M   G+ P V   N  + ALC++NR+  A 
Sbjct: 223 IRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAK 282

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-MRFGSGV----SVYNALINGL 175
            +   M  KG  P+ +SY+T++      G       L  +    G+      +N LIN  
Sbjct: 283 DIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAY 342

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +++A  +  +M ++G+ P+ +T++T+ISSLC +G ++ +L     M   G  P+ 
Sbjct: 343 ARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSE 402

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY-STLIHGLCSNGSMDEAVSVSY 294
             +  L++G    G   +A +L + M+ +   P  V Y S++I+ L   G + E   +  
Sbjct: 403 AVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMD 462

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M +    PNV T+++L++G+   GN+  A  + + M S G  PN   Y  +V   C+N 
Sbjct: 463 LMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG 522

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A ++   M  +   P +V +N  + GL    R   A K+  +M +     +I TY 
Sbjct: 523 RIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYG 582

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            +L GL R N   EA  L+ ++    ++ +I+T+N ++  + + G   EA +L   +   
Sbjct: 583 VVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTY 642

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G      T+N++I    K+     A  L   +   G   PD      ++  +     + +
Sbjct: 643 GLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRA-PDSRLLNHIVRMLLKKAEVAK 701

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           A  YL  +++E      A+   L+ SLFS  G
Sbjct: 702 ASNYLS-IIDENNLTLEASTISLLASLFSREG 732


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 271/549 (49%), Gaps = 9/549 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I   + +L +M+  GV  +  ++ +++  + + G A++ALK F  I   GL     I+N 
Sbjct: 440 IHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNA 499

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L +   E   +        M R  +  +V ++N ++ + C+   V  A+ +   M   G
Sbjct: 500 LLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHG 559

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEAF 185
             PD  +Y +++  +C+ G + +A+E  +              N L+ G+CK   ++EA 
Sbjct: 560 WPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEAL 619

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  +MV R I P+  TY+ ++   C  G +  +L +L  M  +G  P+  ++T LL G 
Sbjct: 620 DLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGL 679

Query: 246 LLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +  G+   AS ++  +I +EG   + +AY+++++G    G ++E   +   M EN   P+
Sbjct: 680 VNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPS 739

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +Y+ L+ G+ K G L     ++  M+  G  P+ V Y  ++  LC+  +   A   +E
Sbjct: 740 SASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLE 799

Query: 365 KMAFENC--PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           KM  E     P    +   I   C  G +D A +L + MK    +P+    + ++ GL +
Sbjct: 800 KMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCK 859

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             +V+EA  + + I + G+   I T+ T++HG+C+   + +AF L   M   G K+D +T
Sbjct: 860 CGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVT 919

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N++I   C +  + +A+ L + ++  G   P+I +Y +L   +  +G MQ+    L+ +
Sbjct: 920 YNVLITGLCNKKCICDALDLYEEMKSKGLL-PNITTYITLTGAMYATGTMQDGEKLLKDI 978

Query: 543 LNEGICPNF 551
            + GI P++
Sbjct: 979 EDRGIVPSY 987



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 277/555 (49%), Gaps = 26/555 (4%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT-VKIYNHILDA 74
           Y+  QM  + +  S   + ++I+ Y R G  ++A ++ Y ++  G++P  V     IL  
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKC 414

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           +LA                DG++P+V TY+ L+  +CK   +    ++L  M   G  P+
Sbjct: 415 MLA----------------DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPN 458

Query: 135 AVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLC 189
            V YTT+V   CK G  +EA +  +  + SG+     ++NAL+    +E  I EA     
Sbjct: 459 NVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQ 518

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M    I  +V +++ II S C  GNV  +  +   M   G  P+I ++ SLL+G   GG
Sbjct: 519 YMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGG 578

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +A +    ++ +    +    +TL+ G+C +G++DEA+ +  +M   +  P+  TY+
Sbjct: 579 HLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYT 638

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AF 368
            L+DGF K G ++ A  +   M+  G  P+ +AYTC++  L        A  + +++   
Sbjct: 639 ILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICK 698

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E    + + +N+ + G    G+++   +L+  M + E  P+  +YN L+ G ++  ++  
Sbjct: 699 EGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSR 758

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE--GTKLDAITFNII 486
              L  ++ K GI+ + VTY  ++ G+C  G++  A + L KM++E  G +     +  +
Sbjct: 759 TLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIAL 818

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I A C+ G ++ A +L + ++  G   P  ++ +S++ G+C  G ++EA I    ++  G
Sbjct: 819 INAKCRVGDIDGAFELKEDMKALGVV-PSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAG 877

Query: 547 ICPNFATWNVLVRSL 561
           + P  AT+  L+  L
Sbjct: 878 MVPTIATFTTLMHGL 892



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/552 (27%), Positives = 261/552 (47%), Gaps = 28/552 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+NS    G   +A  M  +++   L P    YN IL+  + + R      I  +M+++G
Sbjct: 236 VLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNG 294

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           +E +++TYNI++  LCK  R   AY LL  M      PD  SY T++      G++  A 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAI 354

Query: 155 ----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM------------------- 191
               + L       V+ Y ALI+G C+  + +EA  +L EM                   
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKC 414

Query: 192 -VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
            +  GIDP+VITYS +I+ +C +G +  +  IL +M   G  PN   +T+L+  +   G 
Sbjct: 415 MLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGH 474

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA   +  + R G + N V ++ L+      G + EA      M       +V +++ 
Sbjct: 475 AKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNC 534

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +ID + + GN+L A  +++ M+ +G  P++  Y  +++ LCQ     QA   +  +  + 
Sbjct: 535 IIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 594

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C  +  T NT + G+C  G +D A+ L ++M     LP+  TY  LLDG  +  ++  A 
Sbjct: 595 CAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPAL 654

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI-EGTKLDAITFNIIIYA 489
            L+  + + G+  + + Y  +L+G+   G V  A  +  +++  EG   D I +N ++  
Sbjct: 655 ILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNG 714

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           Y K G++N  I+ L R     E  P   SY  L+ G    G +       + M+ EGI P
Sbjct: 715 YLKGGQINE-IERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKP 773

Query: 550 NFATWNVLVRSL 561
           +  T+ +L+  L
Sbjct: 774 DNVTYRLLIFGL 785



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 276/587 (47%), Gaps = 49/587 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISV------------------INSYRRVGLAEQALKMFYRIRE 58
           +L+ + + G SCS  +F S+                  +N+Y + G    A    + + E
Sbjct: 130 VLRHLALTGFSCS-AIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE 188

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G K ++   N+IL+AL+  N+   +              +V T NI+L +LC   ++  
Sbjct: 189 CGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSK 248

Query: 119 AYKLLVEMGNKGCA-PDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALI 172
           A  +L +M N  C  P+AV+Y TI++   K G+ + A R L     +G+      YN +I
Sbjct: 249 AESMLQKMKN--CRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI 306

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           + LCK  +   A+ LL  M +  + P+  +Y+T+I      G +  ++ I  QM  +   
Sbjct: 307 DKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLK 366

Query: 233 PNIHSFTSLLKGYLLGGRTHE--------------------ASDLWNRMIREGFLPNVVA 272
           P++ ++T+L+ GY   GRT E                    A  +   M+ +G  P+V+ 
Sbjct: 367 PSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVIT 426

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS LI+G+C  G + E   +  +M+++   PN   Y+ L+  F KAG+   A + +  + 
Sbjct: 427 YSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIY 486

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G   N V +  ++    +  M  +A    + M+      +  +FN  I   C  G V 
Sbjct: 487 RSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVL 546

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  + D M ++   P+I TY  LL GL +   + +A E +  + +    ++  T NT+L
Sbjct: 547 EAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLL 606

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+C+ G + EA  L  KM+      D  T+ I++  +CK+GK+  A+ LL  +   G  
Sbjct: 607 VGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKG-L 665

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKML-NEGICPNFATWNVLV 558
            PD I+YT LL G+ N G ++ A    Q+++  EG+  +   +N ++
Sbjct: 666 VPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMM 712



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +IDG   L + MK  GV  SE    S++    + G  E+A+ +F  I   G+ PT+  + 
Sbjct: 827 DIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFT 886

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  E +      +   M+  G++ +V TYN+L+  LC    +  A  L  EM +K
Sbjct: 887 TLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSK 946

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL 157
           G  P+  +Y T+  ++   G +++  +L
Sbjct: 947 GLLPNITTYITLTGAMYATGTMQDGEKL 974



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/219 (20%), Positives = 97/219 (44%), Gaps = 20/219 (9%)

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y   V +L Q  M  QA S++  +A      + + F++ ++ +  C              
Sbjct: 111 YCMAVHILVQAQMPSQAMSVLRHLALTGFSCSAI-FSSLLRTISRCDPT----------- 158

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                 N+ + + L++  ++  +V +A   +  +++CG + ++ + N IL+ +       
Sbjct: 159 ------NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSE 212

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
             +  L + L     LD  T NI++ + C QGK++ A  +L +++      P+ ++Y ++
Sbjct: 213 YVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL--PNAVTYNTI 270

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L      G  + A   L  M   GI  +  T+N+++  L
Sbjct: 271 LNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKL 309


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/435 (31%), Positives = 235/435 (54%), Gaps = 6/435 (1%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP++  ++ +++A     +      +  N+ + G + +V     L+K LC   RV  A 
Sbjct: 101 IKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAV 160

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            LL E  ++G   D V Y TI++ +CK+G+  +A ++      +R    + +YN +I+GL
Sbjct: 161 SLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGL 220

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPN 234
           CK+  ++EA  L  EMV+ GI+ +V +Y+++I   C VG  + ++ +L +M VRG   P+
Sbjct: 221 CKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPD 280

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++F  L+ G    GR  EA ++   MI+ G+ P++V+Y+ L++G C +GS+ EA  V  
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M E +  PNV +Y  LI+G+ K   +  A  +   M +    P+ V Y C++  L ++ 
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
                  L+E M     P + +T+N  +       + D A+ L   + +    PNI TYN
Sbjct: 401 RSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYN 460

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LLDGL +  R+K A E+   +   G Q NI TYN ++HG+C+ G + EA  LL KM+  
Sbjct: 461 ILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNN 520

Query: 475 GTKLDAITFNIIIYA 489
               + ITF+ I+ A
Sbjct: 521 NYLPNYITFDTIVRA 535



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 256/504 (50%), Gaps = 47/504 (9%)

Query: 68  YNHILDALLAENRFSMINPIYSNMK-RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           +N +L  L+   R++ +  +Y+ ++ +  ++P++ T++IL+ A  +  ++  A+ LL  +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL-------AMRFGSGVSVYNALINGLCKEH 179
              G   D    TT++  +C  G+V EA  L         RF      Y  +INGLCK  
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDE--VCYGTIINGLCKIG 189

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           K  +A  +  +M    + PN+I Y+T+I  LC  G V+ + G+  +M   G   +++S+ 
Sbjct: 190 KTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYN 249

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           S++ G+   GR   A  L + M+  G   P+V  ++ LI GLC  G + EA +V   M +
Sbjct: 250 SMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIK 309

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               P++ +Y+AL++G+  +G++  A Q++++M+     PNV++Y  ++   C+  M  +
Sbjct: 310 RGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDE 369

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  L+ +M  +N  P+TVT+N  + GL   GR  +   L++ M+      ++ TYN LLD
Sbjct: 370 AMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLD 429

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
              +  +  +A  L   I + GI  NI TYN +L G+C++G +  A ++   +  +G + 
Sbjct: 430 DYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQP 489

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           +  T+NI+I+  CK+G ++ A                                  EA +Y
Sbjct: 490 NIRTYNIMIHGLCKEGFLDEA----------------------------------EALLY 515

Query: 539 LQKMLNEGICPNFATWNVLVRSLF 562
             KM+N    PN+ T++ +VR++ 
Sbjct: 516 --KMVNNNYLPNYITFDTIVRAIL 537



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 219/430 (50%), Gaps = 8/430 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR-FSMINPIYSNM 91
           F  +IN++ ++G    A  +   I + G +  V+I   ++  L  + R    ++ ++  +
Sbjct: 108 FSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYV 167

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G   +   Y  ++  LCK  +   A ++  +M      P+ + Y T++  +CK G V
Sbjct: 168 DR-GFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLV 226

Query: 152 EEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYST 205
           +EA  L            V  YN++I+G C   + + A  LL EMV RG + P+V T++ 
Sbjct: 227 DEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNI 286

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC +G V  +  ++  M  RG  P+I S+ +L+ GY L G   EA  ++++M+   
Sbjct: 287 LIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERT 346

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            LPNV++Y TLI+G C    +DEA+ +  +M   +  P+  TY+ L+DG +K+G  L   
Sbjct: 347 ALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEW 406

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
            +   M ++G   +++ Y  ++    ++  F +A +L + +      PN  T+N  + GL
Sbjct: 407 DLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGL 466

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  GR+ +A ++   +    C PNI TYN ++ GL +   + EA  L+ ++       N 
Sbjct: 467 CKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNY 526

Query: 446 VTYNTILHGV 455
           +T++TI+  +
Sbjct: 527 ITFDTIVRAI 536



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 195/375 (52%), Gaps = 6/375 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +    G    E  + ++IN   ++G    A++MF ++++  + P + +YN ++D L 
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDA 135
            +        + + M  +G+E +V++YN ++   C   R   A KLL EM  +G   PD 
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 136 VSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCE 190
            ++  ++  +CKLG+V EA   +A+    G    +  YNAL+NG C    + EA  +  +
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV+R   PNVI+Y T+I+  C V  V+ ++ +L +M  +   P+  ++  LL G    GR
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
           +    DL   M   G   +++ Y+ L+     +   D+A+++   + E    PN+ TY+ 
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNI 461

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+DG  K+G L  A +I+  + + GC PN+  Y  M+  LC+     +A +L+ KM   N
Sbjct: 462 LLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNN 521

Query: 371 CPPNTVTFNTFIKGL 385
             PN +TF+T ++ +
Sbjct: 522 YLPNYITFDTIVRAI 536



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 173/333 (51%), Gaps = 2/333 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ +F+ L+  +   G+   A  L   +++ GF  +V   +TL+ GLC  G + EAVS+
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
            ++  +     +   Y  +I+G  K G    A Q++ +M      PN++ Y  ++  LC+
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNIT 411
             +  +A  L  +M       +  ++N+ I G C  GR   A+KLLD+M  + +  P++ 
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           T+N L+DGL ++ RV EA+ +V  + K G + +IV+YN +++G C +G V EA Q+  KM
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +      + I++  +I  YCK   V+ A+ LL  +       PD ++Y  LL G+  SG 
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKN-LVPDTVTYNCLLDGLSKSGR 401

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
               +  ++ M   G   +  T+NVL+   F +
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKH 434



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 41/272 (15%)

Query: 17  LLQQMKVEG-VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL +M V G V      F  +I+   ++G   +A  +   + + G KP +  YN +++  
Sbjct: 267 LLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGY 326

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
                      ++  M      PNV +Y  L+   CK   VD A  LL EM NK   PD 
Sbjct: 327 CLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDT 386

Query: 136 VSYTTIVSSICKLGQ-------VEEARE-------------------------------- 156
           V+Y  ++  + K G+       VE  R                                 
Sbjct: 387 VTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQH 446

Query: 157 -LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
            + +     +  YN L++GLCK  +++ A  +   +  +G  PN+ TY+ +I  LC  G 
Sbjct: 447 IIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGF 506

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           ++ +  +L +M      PN  +F ++++  L+
Sbjct: 507 LDEAEALLYKMVNNNYLPNYITFDTIVRAILV 538



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 30/200 (15%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL +M  + +      +  +++   + G +     +   +R  G    +  YN 
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +LD      +F     ++ ++   G+ PN+ TYNILL  LCK+ R+  A ++   +  KG
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           C P+  +Y  ++  +CK G ++EA                                LL +
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEA------------------------------LLYK 516

Query: 191 MVDRGIDPNVITYSTIISSL 210
           MV+    PN IT+ TI+ ++
Sbjct: 517 MVNNNYLPNYITFDTIVRAI 536


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 239/480 (49%), Gaps = 6/480 (1%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           + + M+ +G + +   YN+L+  LCKN RV  A  +   M  +G A D V+  T+V   C
Sbjct: 219 LVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFC 278

Query: 147 KLGQVEEARELA---MRFGSGVSVYNA--LINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           +  +++ A E+     R G   S  N   +++GL K+ ++EEAF L C++ +  + PN+ 
Sbjct: 279 RTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIF 338

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            Y+ +++++C  G    +  ++ +M  +G  PN  ++  L+      G   +A  + +RM
Sbjct: 339 AYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRM 398

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G    V  Y++LI+  C    +D A+    +M E    PN  +YS +I G  + G+L
Sbjct: 399 REKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDL 458

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
            GA ++  +M   G + N   +T ++   C+     +A  L  KM   N  PN VTFN  
Sbjct: 459 SGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAV 518

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I+G C  G +  A +L DQM      P+  TY  L+ GL   +   +A E V ++E    
Sbjct: 519 IEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCS 578

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            LN  +   +LHG CR G + EA+ +  +M + G KLD I+F II+YA  KQ     +  
Sbjct: 579 VLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCV 638

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L   ++  G   PD + +T ++      G M +A     +M+ +G  PN  T+  LV +L
Sbjct: 639 LFREMKEKGV-RPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNL 697



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 169/618 (27%), Positives = 277/618 (44%), Gaps = 87/618 (14%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
            M   GV+  E    +++  + R    + AL+M   +   G  P+    + +LD L  + 
Sbjct: 257 SMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKG 316

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
           R      +   +    M PN+F YN LL  +CKN     A +L+ EM +KG  P+ V+Y 
Sbjct: 317 RVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYA 376

Query: 140 TIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            ++ S+CK G +++A       RE  +R    V  YN+LIN  CK+  ++ A   L EMV
Sbjct: 377 ILIHSLCKRGMMDDALCMLDRMREKGVRMT--VYPYNSLINCCCKKDDLDMAMGFLSEMV 434

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           + G+ PN  +YS +I+ LC  G++  ++ +  +M  +G   N ++FT+L+ G+    +  
Sbjct: 435 EIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMD 494

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY---- 308
           EAS L+N+M      PN V ++ +I G C  G + +A  +  QM      P+  TY    
Sbjct: 495 EASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLI 554

Query: 309 -------------------------------SALIDGFAKAGNLLGASQIWNRMI----- 332
                                          +AL+ GF + G L  A  +WN M      
Sbjct: 555 SGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGK 614

Query: 333 ------------------------------SNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
                                           G  P+ V +TCM+ +  +     QA + 
Sbjct: 615 LDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNC 674

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            ++M  +   PNTVT+   +  LC    +  A  L  +M     LPN  T+N  LD    
Sbjct: 675 WDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFAT 734

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              ++ A +L   + + G   NIV+ NT++ G C+ G + EA  L+ +    G   D I+
Sbjct: 735 EGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCIS 793

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL-WGICNSGGMQEAF--IYL 539
           ++ +I+  CK+G +N AI+L + +   G   PDI++Y  L+ W  CN  G  +    IY+
Sbjct: 794 YSTVIHELCKKGDINEAIELWNEMLYKGV-KPDIVAYNILIRW--CNIHGESDKCLGIYI 850

Query: 540 QKMLNEGICPNFATWNVL 557
             M+ +G+ PN+ T   L
Sbjct: 851 D-MVKKGVQPNWHTHRAL 867



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 267/515 (51%), Gaps = 9/515 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G+  +E  +  +I+S  + G+ + AL M  R+RE G++ TV  YN +++   
Sbjct: 359 LVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCC 418

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            ++   M     S M   G+ PN  +Y+ ++  LC+   + GA +L  +M  KG A +  
Sbjct: 419 KKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTY 478

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           ++T +++  CK  +++EA  L  +            +NA+I G C    I +AF L  +M
Sbjct: 479 TFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQM 538

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + RG+ P+  TY ++IS LC       +   +  +       N  S T+LL G+   GR 
Sbjct: 539 MCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRL 598

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  +WN M   G   ++++++ +++        +++  +  +M+E    P+   ++ +
Sbjct: 599 TEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCM 658

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ ++K GN++ A   W+ MI++G  PN V YT +V  LC++     A  L ++M   + 
Sbjct: 659 INMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHF 718

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN+ TFN F+      G ++ A  L   M Q   L NI + N L+ G  +V +++EA +
Sbjct: 719 LPNSYTFNCFLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAID 777

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L++   + G   + ++Y+T++H +C+ G + EA +L  +ML +G K D + +NI+I    
Sbjct: 778 LISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCN 837

Query: 492 KQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWG 525
             G+ +  + + +D ++ G +  P+  ++ +L  G
Sbjct: 838 IHGESDKCLGIYIDMVKKGVQ--PNWHTHRALFVG 870



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/623 (22%), Positives = 269/623 (43%), Gaps = 77/623 (12%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            ++L   M   GV   E V+ + I +Y  V   + A  +  R+++ G K +   YN ++ 
Sbjct: 181 ARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIY 240

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    R      + ++M   G+  +  T   L+   C+   +D A ++  +M   G  P
Sbjct: 241 GLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVP 300

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
              + + ++  + K G+VEEA  LA + G       +  YNAL+N +CK     EA  L+
Sbjct: 301 SEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLV 360

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM D+G++PN +TY+ +I SLC  G ++ +L +L +M  +G    ++ + SL+      
Sbjct: 361 NEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKK 420

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
                A    + M+  G  PN  +YS +I GLC  G +  AV +  +M E     N  T+
Sbjct: 421 DDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTF 480

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +ALI+GF KA  +  AS+++N+M  +   PN V +  +++  C      +A  L ++M  
Sbjct: 481 TALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMC 540

Query: 369 ENCPPNTVTFNTFIK-----------------------------------GLCGCGRVDW 393
               P+  T+ + I                                    G C  GR+  
Sbjct: 541 RGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTE 600

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL---------- 443
           A  + ++M  +    ++ ++  ++   L+ +  +++  L  E+++ G++           
Sbjct: 601 AYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMIN 660

Query: 444 -------------------------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
                                    N VTY  +++ +C++  +  A  L  +ML      
Sbjct: 661 MYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLP 720

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           ++ TFN  +  +  +G +  A  L   +  G  +  +I+S  +L+ G C  G +QEA   
Sbjct: 721 NSYTFNCFLDYFATEGNLETAKDLYFAMLQG--FLANIVSVNTLIKGFCKVGQIQEAIDL 778

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
           + +    G  P+  +++ ++  L
Sbjct: 779 ISRSTENGFFPDCISYSTVIHEL 801



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 200/420 (47%), Gaps = 6/420 (1%)

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGV----SVYNALINGLCKEHKIEEA 184
           G APD  + + I+ S+ K+ Q   AR L      SGV     VY A I   C+   ++ A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+  M D G   + + Y+ +I  LC    V  ++ +   M  RG   +  +  +L+ G
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +        A ++   M R GF+P+    S ++ GL   G ++EA  ++ Q+ E    PN
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y+AL++   K G    A ++ N M   G  PN V Y  ++  LC+  M   A  +++
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +        +N+ I   C    +D AM  L +M +    PN  +Y+ ++ GL R  
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG 456

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +  A EL  ++ + G+  N  T+  +++G C+A  + EA +L  KM     + + +TFN
Sbjct: 457 DLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFN 516

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  YC  G +  A QL D++   G   PD  +Y SL+ G+C + G  +A  ++  + N
Sbjct: 517 AVIEGYCLVGDIRKAFQLYDQMMCRG-LTPDNYTYRSLISGLCLTDGASKAKEFVADLEN 575



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 187/402 (46%), Gaps = 36/402 (8%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI P+  T S I+ SL  +     +  +   M   G   + + +T+ ++ Y        A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-------EENSCP----- 302
             L  RM  EG   + V Y+ LI+GLC N  + EAV V   M       +E +C      
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 303 -----------------------PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
                                  P+    S ++DG  K G +  A ++  ++      PN
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPN 336

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           + AY  ++  +C+N MF +A  L+ +M+ +   PN VT+   I  LC  G +D A+ +LD
Sbjct: 337 IFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLD 396

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M++      +  YN L++   + + +  A   ++E+ + G+  N  +Y+ ++ G+CR G
Sbjct: 397 RMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKG 456

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A +L  KM  +G   +  TF  +I  +CK  K++ A +L +++       P+ +++
Sbjct: 457 DLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESN-LEPNEVTF 515

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +++ G C  G +++AF    +M+  G+ P+  T+  L+  L
Sbjct: 516 NAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGL 557



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/452 (21%), Positives = 198/452 (43%), Gaps = 39/452 (8%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K ++D     L +M   G++ +   +  VI    R G    A+++  ++ E G+     
Sbjct: 419 KKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTY 478

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +  +++      +    + +++ M    +EPN  T+N +++  C    +  A++L  +M
Sbjct: 479 TFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQM 538

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-----ALINGLCKEHKI 181
             +G  PD  +Y +++S +C      +A+E      +  SV N     AL++G C+E ++
Sbjct: 539 MCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRL 598

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA+ +  EM   G   ++I+++ I+ +     + E S  +  +M  +G  P+    T +
Sbjct: 599 TEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCM 658

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +  Y   G   +A + W+ MI +G LPN V Y+ L++ LC +  +  A  +  +M  +  
Sbjct: 659 INMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHF 718

Query: 302 PPNVTTYSALID----------------------------------GFAKAGNLLGASQI 327
            PN  T++  +D                                  GF K G +  A  +
Sbjct: 719 LPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAIDL 778

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            +R   NG  P+ ++Y+ ++  LC+    ++A  L  +M ++   P+ V +N  I+    
Sbjct: 779 ISRSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNI 838

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            G  D  + +   M +    PN  T+  L  G
Sbjct: 839 HGESDKCLGIYIDMVKKGVQPNWHTHRALFVG 870


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 262/539 (48%), Gaps = 9/539 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A   F      G+ P++K  N ++ +L+  N       ++  M R G+  +V+TY   + 
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGS 163
           A CK  ++D A  L ++MG  G  P+ V+Y  ++  +CK G++EEA     R +  +   
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            +  Y  L+NGL K  K +EA  +L EM  +G  PN   ++ +I      GN++ +L + 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M ++G  PN  +  +LL+G+    +  +A  +   ++      N  A S ++H LC +
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS-NGCSPNVVA 342
              D A+ +   +   +   N +  + L+ G  K G  L A  +W R+    G + N   
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTT 489

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
              ++  LC+     +   + ++M       + +++NT I G C  G+++ A KL ++M 
Sbjct: 490 SNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMM 549

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P+  TYN L+ GL    ++ +   ++ E +  G+  NI TY  +L G C A  + 
Sbjct: 550 KQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRID 609

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            A  L  K++    +L  + +NI+I A+ K G    A +L D +R     +P I +Y+S+
Sbjct: 610 NAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSN-IHPTIFTYSSI 668

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV-YILDDIMAN 580
           + G+C +  ++EA    ++M NEG+ PN   +  L+   +  LG +  +  IL ++ +N
Sbjct: 669 IHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGG-YCKLGQMDQIESILQEMTSN 726



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 263/555 (47%), Gaps = 13/555 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISV------INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           L +  +V    C  GV I V      IN+Y + G  ++A+ +F ++ E G+ P V  YN+
Sbjct: 222 LHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNN 281

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L    R          M  + + P++ TY IL+  L K  + D A  +LVEM +KG
Sbjct: 282 LIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKG 341

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
            +P+   +  ++    + G +++A     ++ ++        +N L+ G C+ +++E+A 
Sbjct: 342 FSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAE 401

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L  ++   +  N    S ++  LC     +++L I+  + +R    N    T L+ G 
Sbjct: 402 QVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGL 461

Query: 246 LLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
              G+  EA DLW R+  ++G   N    + L++GLC  G+M+E   V  +M E     +
Sbjct: 462 CKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLD 521

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +Y+ LI G  K+G +  A ++  +M+  G  P+   Y  ++K L           ++ 
Sbjct: 522 GISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLH 581

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +       PN  T+   ++G C   R+D A+ L +++   +   +   YN L+    +  
Sbjct: 582 EAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAG 641

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
              EAF+L   +    I   I TY++I+HG+C   +V EA  +  +M  EG   +   + 
Sbjct: 642 NFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYT 701

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  YCK G+++    +L  +       P+ I+YT ++ G C  G  +EA   L +M+ 
Sbjct: 702 ALIGGYCKLGQMDQIESILQEMTSNC-IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIA 760

Query: 545 EGICPNFATWNVLVR 559
            GI P+  T+ VL +
Sbjct: 761 NGISPDTVTYTVLQK 775



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/484 (28%), Positives = 248/484 (51%), Gaps = 11/484 (2%)

Query: 104 NILLKALCKNNRVDG---AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--A 158
           ++L+  LC   +  G   A+   +   +KG  P   S   ++SS+ K  ++ ++  +  A
Sbjct: 172 DLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDA 231

Query: 159 M-RFGSGVSVYN--ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           M R G  + VY     IN  CK  KI+EA  L  +M + G+ PNV+TY+ +I  LC  G 
Sbjct: 232 MCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGR 291

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +E +L   G+M     NP++ ++  L+ G +   +  EA+ +   M  +GF PN   ++ 
Sbjct: 292 LEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNA 351

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI G    G+MD+A+ V   M      PN  T++ L+ GF +   +  A Q+   ++SN 
Sbjct: 352 LIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNV 411

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            S N  A + ++ +LC+++ F  A  +++ +   N   N       + GLC CG+   A+
Sbjct: 412 LSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAI 471

Query: 396 KLLDQMKQYECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            L  ++   + L  N TT N LL GL     ++E F +  E+ + G+ L+ ++YNT++ G
Sbjct: 472 DLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFG 531

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C++G + EAF+L  KM+ +G K D  T+N ++     +GK+++  ++L   +  G   P
Sbjct: 532 CCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVV-P 590

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +I +Y  +L G CN+  +  A     K++   +  ++  +N+L+ +  S  G+    + L
Sbjct: 591 NIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAA-HSKAGNFTEAFKL 649

Query: 575 DDIM 578
            D M
Sbjct: 650 RDAM 653



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 136/277 (49%), Gaps = 10/277 (3%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G  E+A K+  ++ + G KP    YN ++  L  + +   +  +    K  G+ PN++
Sbjct: 534 KSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIY 593

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
           TY ++L+  C  +R+D A  L  ++         V Y  ++++  K G   EA +L  AM
Sbjct: 594 TYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM 653

Query: 160 RFGS---GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           R  +    +  Y+++I+G+C    +EEA  +  EM + G+ PNV  Y+ +I   C +G +
Sbjct: 654 RSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQM 713

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +    IL +M      PN  ++T ++ GY   G T EA+ L N MI  G  P+ V Y+ L
Sbjct: 714 DQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 773

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
             G C    ++E +       + + P    TY+ L+D
Sbjct: 774 QKGYCKENELEETLQ-----GDTAVPLEEITYTTLVD 805



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 5/225 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K ++D V  +L + K  GV  +   +  ++  Y      + A+ +F ++    
Sbjct: 563 LMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNK 622

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ +  +YN ++ A      F+    +   M+   + P +FTY+ ++  +C N+ V+ A 
Sbjct: 623 VELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAK 682

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGL 175
            +  EM N+G  P+   YT ++   CKLGQ+++   +     S         Y  +I+G 
Sbjct: 683 GIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGY 742

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           CK    +EA  LL EM+  GI P+ +TY+ +    C    +E +L
Sbjct: 743 CKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETL 787



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 10/215 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E       ID    L  ++    V  S  V+  +I ++ + G   +A K+   +R   
Sbjct: 598 MLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSN 657

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PT+  Y+ I+  +   +       I+  M+ +G+ PNVF Y  L+   CK  ++D   
Sbjct: 658 IHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIE 717

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
            +L EM +    P+ ++YT ++   CK+G  +EA +L      +G+S     Y  L  G 
Sbjct: 718 SILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGY 777

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           CKE+++EE         D  +    ITY+T++  L
Sbjct: 778 CKENELEETL-----QGDTAVPLEEITYTTLVDKL 807


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 172/645 (26%), Positives = 294/645 (45%), Gaps = 98/645 (15%)

Query: 17  LLQQMKVEGVSCSEGVFISV-INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL +M   G+ C + +  ++ +  Y R+GL + A  + Y + + G+   V   N ++D  
Sbjct: 184 LLSEMVKRGL-CFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN----------NRVDGAYKLLVE 125
                 S    +  N  R  ++ ++ TYN LLKA CK           N + G +K    
Sbjct: 243 CEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302

Query: 126 MGN---------KGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNAL 171
           + N         K   P  V+YTT++++ CK   VEE+  L  +         V   +++
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSI 362

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + G C+  K+ EA  L  EM + G+DPN ++Y+TII+SL   G V  +  +  QM VRG 
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI 422

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           + +I + T+++ G    G+T EA +++  +++    PN V YS L+ G C  G M+ A  
Sbjct: 423 SFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAEL 482

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV---- 347
           V  +ME+   PPNV T+S++I+G+AK G L  A  +   M+     PN + Y  ++    
Sbjct: 483 VLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYF 542

Query: 348 -----------------KVLCQNNM--------------FHQAHSLIEKMAFENCPPNTV 376
                            + L ++N+                +A SLI  M  +   P+ V
Sbjct: 543 KAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIV 602

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            + + I G    G    A+ ++ +MK+     ++  YN L+ GLLR+ +    +     I
Sbjct: 603 NYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMI 662

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG-- 494
           E  G+  + +TYNTI++  C  G   +A  +L +M   G   +A+T+NI+I   CK G  
Sbjct: 663 E-LGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFV 721

Query: 495 -----------------KVNNAIQLLDRIRGGG----------------EWNPDIISYTS 521
                            K +  +Q+ +++   G                  + D+++Y +
Sbjct: 722 PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNA 781

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           L+ G C    +++A     +M  +GI PN  T+N L+  L SN G
Sbjct: 782 LIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGL-SNAG 825



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 268/587 (45%), Gaps = 47/587 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ Q +++ +  +   + ++I +Y +    E++  ++ ++   G+ P V   + IL    
Sbjct: 308 VVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFC 367

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    ++  M   G++PN  +Y  ++ +L K+ RV  A+ L  +M  +G + D V
Sbjct: 368 RHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIV 427

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           + TT++  + K+G+ +EA E     L +        Y+AL++G CK  K+E A  +L +M
Sbjct: 428 TCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKM 487

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               + PNVIT+S+II+     G +  ++ +L +M  R   PN   +  L+ GY   G  
Sbjct: 488 EKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQ 547

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A D    M       + V +  L++ L   G MDEA S+   M      P++  Y++L
Sbjct: 548 DVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASL 607

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+ K GN L A  I   M       +VVAY  ++K L +   +   + +  +M     
Sbjct: 608 IDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGL 666

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV----- 426
            P+ +T+NT I   C  G+ + A+ +L++MK Y  +PN  TYN L+ GL +   V     
Sbjct: 667 APDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPIT 726

Query: 427 -------------------------------KEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                                          K    ++ E+ K GI  ++VTYN ++ G 
Sbjct: 727 HKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGY 786

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG----KVNNAIQLLDRIRGGGE 511
           C    V +A +   +M ++G   +  T+N ++      G     +    +L+  +   G 
Sbjct: 787 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERG- 845

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             P+  +Y  L+ G    G  ++  I   +M+ +G  P   T+NVL+
Sbjct: 846 LVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 892



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/598 (23%), Positives = 275/598 (45%), Gaps = 59/598 (9%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++I  Y        A   F  +R  GL PT+  +N +L    A    S +  +YS+M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 93  RDGMEPNVFTYNILLKALCK------------NNR---------------------VDGA 119
             G+ P+VF+ N+L+ +LCK            NN                      VD  
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQG 181

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALING 174
           + LL EM  +G   D+++   +V   C++G V+ A  +      G     V   N LI+G
Sbjct: 182 FGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDG 241

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF------- 227
            C+   + +A  L+       +  +++TY+T++ + C  G++  +  +  ++        
Sbjct: 242 YCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDED 301

Query: 228 ------------VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
                       ++   P + ++T+L+  Y       E+  L+ +MI  G +P+VV  S+
Sbjct: 302 RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSS 361

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++G C +G + EA  +  +M E    PN  +Y+ +I+   K+G ++ A  + ++M+  G
Sbjct: 362 ILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG 421

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            S ++V  T ++  L +     +A  + E +   N  PN VT++  + G C  G+++ A 
Sbjct: 422 ISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAE 481

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            +L +M++    PN+ T++ +++G  +   + +A +++ E+ +  +  N + Y  ++ G 
Sbjct: 482 LVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGY 541

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            +AG    A     +M     +   + F+I++    + G+++ A  L+  +   G  +PD
Sbjct: 542 FKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKG-IDPD 600

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           I++Y SL+ G    G    A   +Q+M  + I  +   +N L++ L   LG   P Y+
Sbjct: 601 IVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLL-RLGKYDPRYV 657



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 255/524 (48%), Gaps = 16/524 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM V G+S       +V++   +VG  ++A ++F  I +  L P    Y+ +LD   
Sbjct: 413 LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYC 472

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +  +   +   M+++ + PNV T++ ++    K   +  A  +L EM  +   P+ +
Sbjct: 473 KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTI 532

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  ++    K G+ + A +      + R      +++ L+N L +  +++EA  L+ +M
Sbjct: 533 VYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDM 592

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +GIDP+++ Y+++I      GN   +L I+ +M  +    ++ ++ +L+KG L  G+ 
Sbjct: 593 YSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGK- 651

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++   + +RMI  G  P+ + Y+T+I+  C  G  ++A+ +  +M+     PN  TY+ L
Sbjct: 652 YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNIL 711

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV---KVLCQNNMFHQAHSLIEKMAF 368
           I G  K G +   + I ++ +    S +  A   +    K++       +   ++++M  
Sbjct: 712 IGGLCKTGFV--PTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVK 769

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL----LRVN 424
                + VT+N  I+G C    V+ A+K   QM      PNITTYN LL GL    L   
Sbjct: 770 RGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEE 829

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            ++E  +LV+E+ + G+  N  TY+ ++ G  R G   +   L  +M+ +G      T+N
Sbjct: 830 MMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYN 889

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
           ++I  Y K GK+  A +LL+ +   G   P+  +Y  L  G  N
Sbjct: 890 VLISDYAKSGKMIEARELLNDLLTKGRI-PNSFTYDILTCGWLN 932



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 237/503 (47%), Gaps = 22/503 (4%)

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  +  ++   L  +RFS  +  +S+M+  G+ P +  +N LL     +  V     +  
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYS 118

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV----YNALINGLCKEHK 180
           +M   G  PD  S   +V S+CK+G ++ A    +R    V +    YN +I G C++  
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGY-LRNNDVVDIDNVTYNTVIWGFCQKGL 177

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +++ F LL EMV RG+  + IT + ++   C +G V+ +  ++  +   G   ++    +
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ GY       +A++L     R     ++V Y+TL+   C  G +  A S+  +     
Sbjct: 238 LIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNE----- 292

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
                      I GF K  + L  + +  +       P +V YT ++   C+     ++H
Sbjct: 293 -----------ILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL +KM      P+ VT ++ + G C  G++  A  L  +M +    PN  +Y  +++ L
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSL 401

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +  RV EAF L +++   GI  +IVT  T++ G+ + G   EA ++   +L      + 
Sbjct: 402 FKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNC 461

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ ++  YCK GK+  A  +L ++       P++I+++S++ G    G + +A   L+
Sbjct: 462 VTYSALLDGYCKLGKMELAELVLQKME-KEHVPPNVITFSSIINGYAKKGMLSKAVDVLR 520

Query: 541 KMLNEGICPNFATWNVLVRSLFS 563
           +M+   + PN   + +L+   F 
Sbjct: 521 EMVQRNVMPNTIVYAILIDGYFK 543



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 226/494 (45%), Gaps = 62/494 (12%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ++  + +LQ+M+ E V  +   F S+IN Y + G+  +A+ +   + +  + P
Sbjct: 473 KLGK---MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 529

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
              +Y  ++D         + +     MK   +E +   ++ILL  L +  R+D A  L+
Sbjct: 530 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 589

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQ-------VEEARELAMRFGSGVSVYNALINGLC 176
           ++M +KG  PD V+Y +++    K G        V+E +E  +RF   V  YNALI GL 
Sbjct: 590 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF--DVVAYNALIKGLL 647

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +  K +   ++   M++ G+ P+ ITY+TII++ C  G  E +L IL +M   G  PN  
Sbjct: 648 RLGKYDPR-YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAV 706

Query: 237 SFTSLLKGYLLGG----------------RTHEASDL--------------------WNR 260
           ++  L+ G    G                R+ +A  +                     + 
Sbjct: 707 TYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDE 766

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M++ G   ++V Y+ LI G C+   +++A+    QM  +   PN+TTY+ L+ G + AG 
Sbjct: 767 MVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGL 826

Query: 321 LLGASQIWNRMIS----NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           +    +   +++S     G  PN   Y  +V    +     +   L  +M  +   P   
Sbjct: 827 MEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLK 886

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN-------RVKEA 429
           T+N  I      G++  A +LL+ +     +PN  TY+ L  G L ++        +K +
Sbjct: 887 TYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRS 946

Query: 430 FELVTEIEKCGIQL 443
           +E+  E++K  I++
Sbjct: 947 YEI--EVKKLLIEM 958



 Score = 42.4 bits (98), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 14/127 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G+  +   +  +++ Y RVG  ++ + +   +   G  PT+K YN ++    
Sbjct: 837 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 896

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILL-------------KALCKNNRVDGAYKLL 123
              +      + +++   G  PN FTY+IL              ++L ++  ++   KLL
Sbjct: 897 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIE-VKKLL 955

Query: 124 VEMGNKG 130
           +EMG KG
Sbjct: 956 IEMGRKG 962


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 238/473 (50%), Gaps = 44/473 (9%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  +NHIL +L+  N +     ++  ++ +G++P++ T  IL+   C    +   + +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCK 177
           L ++   G  P+++++TT++  +C  GQ  EA       +A  F      Y  L+NGLCK
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +   A  +L +     ++ +V+ YSTII SLC                          
Sbjct: 128 MGETRAAMQMLRK---TWVNADVVMYSTIIDSLCK------------------------- 159

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
                     G    +A  L++ MI +G  PNV  +S L+  LC +    +A+++   M 
Sbjct: 160 ----------GKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMM 209

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    PNV TY A++DG+     +  A  I+N M+  G  PNV  Y  ++  LC+     
Sbjct: 210 KKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVD 269

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A +L ++M ++   P+ VT+N  I GLC  G++  +++L+D+M+      +I TYN LL
Sbjct: 270 EAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLL 329

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             L + + + +A  LV EI+  GIQ N+ TY T++ G+C+ G + +A+ +  ++L EG  
Sbjct: 330 HALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYH 389

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           +   T+N++I   CK+G  + A+ LL R+       PD +SY ++++ +   G
Sbjct: 390 ITVWTYNVMINGLCKKGLFDEALALLSRMEDNA-CIPDAVSYETIIYALSEKG 441



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 239/445 (53%), Gaps = 2/445 (0%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ S  ++     A+ +F ++   G+KP++     +++        + +  I + + 
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EPN  T+  L+K +C N +   A      +   G   D VSY  +++ +CK+G+  
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132

Query: 153 EARELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            A ++  +    + V +Y+ +I+ LCK   + +A+ L  EM+ +GI PNV T+S ++ +L
Sbjct: 133 AAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDAL 192

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C     + ++ +L  M  +G  PN+ ++ +++ GY L  + ++A +++N M++EG  PNV
Sbjct: 193 CKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNV 252

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ +I+GLC    +DEA+++  +M      P+V TY+ LIDG  K G +  + ++ + 
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M S G + +++ Y  ++  LC+N+   QA +L++++  +   PN  T+ T I GLC  GR
Sbjct: 313 MRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGR 372

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           ++ A  +  ++        + TYN +++GL +     EA  L++ +E      + V+Y T
Sbjct: 373 LEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYET 432

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEG 475
           I++ +   G  V+  +LL  M++ G
Sbjct: 433 IIYALSEKGETVKTNKLLCAMIVRG 457



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 215/394 (54%), Gaps = 4/394 (1%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N ++  L K +    A  L  ++   GI P+++T + +++  C  G +     IL ++ 
Sbjct: 13  FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  PN  +FT+L+KG  L G+ +EA    + ++  GF  + V+Y+ L++GLC  G   
Sbjct: 73  KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+ +  +   N+   +V  YS +ID   K   +  A ++++ MI+ G  PNV  ++ +V
Sbjct: 133 AAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC++    QA +L+  M  +   PN VT+   + G C   +V+ A+ + + M Q    
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE 249

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+  YN +++GL +  RV EA  L  E+    I  ++VTYN ++ G+C+ G +  + +L
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           + +M   G  +D IT+N +++A CK   ++ AI L+  I+  G   P++ +YT+L+ G+C
Sbjct: 310 VDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG-IQPNVCTYTTLIDGLC 368

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             G +++A++  Q++L EG      T+NV++  L
Sbjct: 369 KDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 188/363 (51%), Gaps = 5/363 (1%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C++   +  +Q ++   V+    ++ ++I+S  +      A +++  +   G+ P V  +
Sbjct: 126 CKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTF 185

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + ++DAL  + +      + + M + G++PNV TY  ++   C  N+V+ A  +   M  
Sbjct: 186 SILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQ 245

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEE 183
           +G  P+   Y  I++ +CK  +V+EA  L       +    V  YN LI+GLCK  KI  
Sbjct: 246 EGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIST 305

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           +  L+ EM   G   ++ITY++++ +LC   +++ ++ ++ ++  +G  PN+ ++T+L+ 
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLID 365

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G    GR  +A  ++  ++ EG+   V  Y+ +I+GLC  G  DEA+++  +ME+N+C P
Sbjct: 366 GLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIP 425

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  +Y  +I   ++ G  +  +++   MI  G S  +     M  +   N+ +    SL 
Sbjct: 426 DAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWAAYASLE 485

Query: 364 EKM 366
           + M
Sbjct: 486 DGM 488



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 157/332 (47%), Gaps = 4/332 (1%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P I  F  +L   +       A  L+ ++   G  P++V  + L++  C  G +    S+
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             ++ +    PN  T++ LI G    G    A    + ++++G   + V+Y  ++  LC+
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                 A  ++ K        + V ++T I  LC    V  A +L  +M      PN+ T
Sbjct: 128 MGETRAAMQMLRKTWVN---ADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           ++ L+D L +  + K+A  L+  + K G++ N+VTY  I+ G C    V +A  +   M+
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            EG + +   +NIII   CK+ +V+ A+ L   +    + NPD+++Y  L+ G+C  G +
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWK-KINPDVVTYNILIDGLCKLGKI 303

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             +   + +M + G   +  T+N L+ +L  N
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKN 335



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 133/266 (50%), Gaps = 4/266 (1%)

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M + S  P +  ++ ++    K  +   A  ++ ++  NG  P++V  T ++   C    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
                S++ K+      PN++TF T IKG+C  G+   A+   D +  +    +  +Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L++GL ++   + A ++   + K  +  ++V Y+TI+  +C+   V +A++L  +M+ +G
Sbjct: 121 LMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              +  TF+I++ A CK  K   A+ LL  +   G   P++++Y +++ G C    + +A
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGV-KPNVVTYGAIMDGYCLVNQVNKA 236

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
                 M+ EG+ PN   +N+++  L
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGL 262



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 111/267 (41%), Gaps = 30/267 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K  +D    L ++M  + ++     +  +I+   ++G    +L++   +R  G
Sbjct: 258 IINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIG 317

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               +  YN +L AL   +       +   +K  G++PNV TY  L+  LCK+ R++ AY
Sbjct: 318 KTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAY 377

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  E+  +G      +Y  +++ +CK G                               
Sbjct: 378 VIFQEILTEGYHITVWTYNVMINGLCKKGL------------------------------ 407

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            +EA  LL  M D    P+ ++Y TII +L + G    +  +L  M VRG +  +    +
Sbjct: 408 FDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVN 467

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFL 267
           +     L  +    + L + MI   FL
Sbjct: 468 MTTIADLNDKWAAYASLEDGMIHPIFL 494


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 248/478 (51%), Gaps = 11/478 (2%)

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           P+   +++ G+ P+    N +L  L     +D A +L  E+ +K    +  SY  ++ ++
Sbjct: 218 PLLRRLRQYGISPSPEACNAVLSRLP----LDEAIELFQELPHK----NVCSYNILLKAL 269

Query: 146 CKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           C  G+V++AR+L   M     V  Y  LI+G C   ++E A  LL EMV  G++PN   Y
Sbjct: 270 CDAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVY 329

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +++++ LCD G +  +L ++  M  R    +   +T++L G+   G    A   ++ M R
Sbjct: 330 TSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQR 389

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G   + V Y+T+I+GLC    ++EA  +  +M       +  TY+ LIDG+ K G +  
Sbjct: 390 KGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAE 449

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A Q+ N M+  G +PNVV YT +   LC+      A+ L+ +M+ +    N  T+N+ I 
Sbjct: 450 AFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 509

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G ++ AM+ +  M      P++ TY  L+D L +   +  A  L+ E+   GI+ 
Sbjct: 510 GLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP 569

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            IVTYN +++G C +G V    +LL  ML +    +A T+N ++  YC +  + +  ++ 
Sbjct: 570 TIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIY 629

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +R   +  P+  +Y  L+ G C +  M+EA  +  +M+ +G      +++ L+R L
Sbjct: 630 KGMR-SRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLL 686



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 248/528 (46%), Gaps = 51/528 (9%)

Query: 23  VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS 82
           VE    +   F S   S+  + L   +  +  R+R++G+ P+ +  N +L  L  +    
Sbjct: 190 VEHYISTYKTFSSDPASFDFLLLCLPSAPLLRRLRQYGISPSPEACNAVLSRLPLDEAIE 249

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
           +   +           NV +YNILLKALC   RV  A +L  EM +   APD V+Y  ++
Sbjct: 250 LFQELPHK--------NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILI 298

Query: 143 SSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDR--- 194
              C LG++E A +L     +G      +VY +++  LC +  I +A  ++ +MV R   
Sbjct: 299 HGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVI 358

Query: 195 --------------------------------GIDPNVITYSTIISSLCDVGNVETSLGI 222
                                           G+  + +TY+T+I+ LC    +E +  +
Sbjct: 359 LDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL 418

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M+ R  + +  ++T L+ GY   G+  EA  + N M++ G  PNVV Y+ L  GLC 
Sbjct: 419 LQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCK 478

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +  A  + ++M       N  TY++LI+G  KAG L  A +    M +    P+V  
Sbjct: 479 QGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYT 538

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT ++  LC++    +AHSL+++M  +   P  VT+N  + G C  GRV+   KLLD M 
Sbjct: 539 YTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWML 598

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    PN  TYN L+      N +K   E+   +    +  N  TYN ++ G C+A  + 
Sbjct: 599 EKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMK 658

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           EA     +M+ +G +L A +++ +I    K+ K   A +L   +R  G
Sbjct: 659 EALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEG 706



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 228/505 (45%), Gaps = 14/505 (2%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +  +D    L Q++  + V CS  + +  +    RV  A Q         E    P V  
Sbjct: 241 RLPLDEAIELFQELPHKNV-CSYNILLKALCDAGRVKDARQLFD------EMASAPDVVT 293

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++    A         +   M   G+EPN   Y  ++  LC    +  A +++ +M 
Sbjct: 294 YGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMV 353

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRFG---SGVSVYNALINGLCKEHKI 181
            +    D   YTT++S  C  G +  AR   +   R G    GV+ Y  +INGLC+  ++
Sbjct: 354 QRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVT-YTTMINGLCRAVEL 412

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           EEA  LL EM  R +D + +TY+ +I   C  G +  +  +   M  RG  PN+ ++T+L
Sbjct: 413 EEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTAL 472

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
             G    G    A++L + M  +G   N   Y++LI+GLC  G +++A+     M+    
Sbjct: 473 TDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACL 532

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+V TY+ LID   K+G+L  A  +   M+  G  P +V Y  ++   C +        
Sbjct: 533 KPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKK 592

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L++ M  +N  PN  T+N+ +K  C    +    ++   M+  +  PN  TYN L+ G  
Sbjct: 593 LLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHC 652

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +KEA     E+ + G +L   +Y+ ++  + +    VEA +L   M  EG   ++ 
Sbjct: 653 KARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESD 712

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRI 506
            ++  I     +  + + + L D +
Sbjct: 713 VYDFYIDLNFNEDNLESTLALCDEL 737



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 5/383 (1%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           L +K  I     +++ M    V   E ++ +V++ +   G    A + F  ++  GL   
Sbjct: 336 LCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATD 395

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              Y  +++ L           +   M    ++ +  TY +L+   CK  ++  A+++  
Sbjct: 396 GVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHN 455

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEH 179
            M  +G  P+ V+YT +   +CK G V+ A EL     +         YN+LINGLCK  
Sbjct: 456 AMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAG 515

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            +E+A   + +M    + P+V TY+T+I +LC  G+++ +  +L +M  +G  P I ++ 
Sbjct: 516 YLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYN 575

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+ G+ + GR      L + M+ +   PN   Y++L+   C   +M     +   M   
Sbjct: 576 VLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSR 635

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
              PN  TY+ LI G  KA N+  A    + MI  G      +Y+ ++++L +   F +A
Sbjct: 636 DVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEA 695

Query: 360 HSLIEKMAFENCPPNTVTFNTFI 382
             L   M  E     +  ++ +I
Sbjct: 696 RELFHDMRKEGLTAESDVYDFYI 718



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 5/318 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L    E++  + LLQ+M    +   E  +  +I+ Y + G   +A +M   + + G
Sbjct: 402 MINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRG 461

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  + D L  +      N +   M   G+E N  TYN L+  LCK   ++ A 
Sbjct: 462 VTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAM 521

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           + + +M      PD  +YTT++ ++CK G ++ A  L            +  YN L+NG 
Sbjct: 522 RTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGF 581

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++E    LL  M+++ I PN  TY++++   C   N++++  I   M  R   PN 
Sbjct: 582 CMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNE 641

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +++  L+KG+       EA    + MI++GF     +YS LI  L       EA  + + 
Sbjct: 642 NTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHD 701

Query: 296 MEENSCPPNVTTYSALID 313
           M +         Y   ID
Sbjct: 702 MRKEGLTAESDVYDFYID 719


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 222/446 (49%), Gaps = 27/446 (6%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A + F R +++G K ++   N +L AL+ EN+   +  +Y  M +  +  N+ T+NI + 
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFIN 208

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVY 168
            LC+  +++ A   + +M   G +P+ V+Y T+V   CK G             S   +Y
Sbjct: 209 GLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG-------------SAGKMY 255

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
            A            EAF  + EM+   I PN +T++T+I   C   NV  +     +M  
Sbjct: 256 KA------------EAF--MKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQK 301

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           +G  PNI ++ SL+ G    G+  EA DLW++M+  G  PN+V Y+ LI+G C    M E
Sbjct: 302 QGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKE 361

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A  V   + +    PNV T++ +ID + K G +     + + M+  G  PNV  Y C++ 
Sbjct: 362 ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 421

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            LC+      A  L+ +M  +    + VT+N  I GLC   +   A KLL++M      P
Sbjct: 422 GLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  TYN L+DG     ++K A  + T +EK   Q N+VTYN ++ G C+   +  A  LL
Sbjct: 482 NHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLL 541

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQG 494
            +ML +G   +  T++I+     ++G
Sbjct: 542 NEMLEKGLNPNRTTYDIVRLEMLEKG 567



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 256/507 (50%), Gaps = 22/507 (4%)

Query: 54  YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN 113
           YR+  +GL+PT K+ + + ++       S ++    N K         T + +  +L  +
Sbjct: 72  YRL-SYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKH--------TVSSVFHSLLLD 122

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALIN 173
               GA  L+++M         ++Y   +   C       A++   +    ++  N L++
Sbjct: 123 GGRPGATALIIDML-------VLAYVKNLELHCAYEAFTRAKDYGFKLS--LTSCNPLLS 173

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
            L KE+KI +  ++  EM+ R I  N+ T++  I+ LC  G +  +   +  M   G +P
Sbjct: 174 ALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISP 233

Query: 234 NIHSFTSLLKGYLL---GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
           N+ ++ +L+ GY      G+ ++A      M+     PN V ++TLI G C + ++  A 
Sbjct: 234 NVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAK 293

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
               +M++    PN+ TY++LI+G    G L  A  +W++M+  G  PN+V Y  ++   
Sbjct: 294 KAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGF 353

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+  M  +A  + + ++ +   PN +TFNT I   C  G ++    L   M     LPN+
Sbjct: 354 CKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNV 413

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
           +TYN L+ GL R   ++ A EL+ E+E  G++ ++VTYN ++ G+C+      A +LL +
Sbjct: 414 STYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNE 473

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G K + +T+N ++  YC +GK+  A+ +  R+    +  P++++Y  L+ G C   
Sbjct: 474 MFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK-QPNVVTYNVLIKGYCKIN 532

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVL 557
            ++ A   L +ML +G+ PN  T++++
Sbjct: 533 KLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 205/406 (50%), Gaps = 10/406 (2%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD---VGNV 216
           R G+   + + L+    K  ++  A+       D G   ++ + + ++S+L     +G+V
Sbjct: 125 RPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDV 184

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E    +  +M  R  + N+++F   + G    G+ ++A D    M   G  PNVV Y+TL
Sbjct: 185 EY---VYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTL 241

Query: 277 IHGLCSNGS---MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + G C  GS   M +A +   +M  N   PN  T++ LIDGF K  N+  A + +  M  
Sbjct: 242 VDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQK 301

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  PN+V Y  ++  LC N    +A  L +KM      PN VT+N  I G C    +  
Sbjct: 302 QGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKE 361

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A K+ D + + E +PN+ T+N ++D   +   ++E F L + +   GI  N+ TYN ++ 
Sbjct: 362 ATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIA 421

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+CR   +  A +LL +M  +G K D +T+NI+I   CK  K  NA +LL+ +   G   
Sbjct: 422 GLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG-LK 480

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           P+ ++Y +L+ G C  G ++ A     +M  E   PN  T+NVL++
Sbjct: 481 PNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIK 526



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 185/387 (47%), Gaps = 8/387 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ +I  V+Y+ ++M    +  +   F   IN   R G   +A      ++ +G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKR---DGMEPNVFTYNILLKALCKNNRVD 117
           + P V  YN ++D          +    + MK    + + PN  T+N L+   CK+  V 
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALI 172
            A K   EM  +G  P+ V+Y ++++ +C  G++EEA +L      +     +  YNALI
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NG CK+  ++EA  +  ++  + + PNVIT++T+I + C  G +E    +   M   G  
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN+ ++  L+ G         A +L N M  +G   +VV Y+ LI GLC N     A  +
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M      PN  TY+ L+DG+   G L  A  +  RM      PNVV Y  ++K  C+
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFN 379
            N    A+ L+ +M  +   PN  T++
Sbjct: 531 INKLEAANGLLNEMLEKGLNPNRTTYD 557



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 165/327 (50%), Gaps = 4/327 (1%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  Y+     H A + + R    GF  ++ + + L+  L     + +   V  +M +  
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN---MFH 357
              N+ T++  I+G  +AG L  A      M + G SPNVV Y  +V   C+       +
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A + +++M      PN VTFNT I G C    V  A K  ++M++    PNI TYN L+
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +GL    +++EA +L  ++   G++ NIVTYN +++G C+  M+ EA ++   +  +   
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + ITFN +I AYCK+G +     L   +   G   P++ +Y  L+ G+C    +Q A  
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL-PNVSTYNCLIAGLCRKQDLQAAKE 434

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
            L +M N+G+  +  T+N+L+  L  N
Sbjct: 435 LLNEMENKGLKGDVVTYNILIDGLCKN 461



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 158/329 (48%), Gaps = 18/329 (5%)

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           H+ +S+    LL G    A+ L   M+       V+AY   +   C+  +   A    ++
Sbjct: 110 HTVSSVFHSLLLDGGRPGATALIIDML-------VLAYVKNLELHCAYEAFTRAKDYGFK 162

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +   SC P       L+    K   +     ++  MI      N+  +   +  LC+   
Sbjct: 163 LSLTSCNP-------LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGK 215

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLC---GCGRVDWAMKLLDQMKQYECLPNITT 412
            ++A   IE M      PN VT+NT + G C     G++  A   + +M   +  PN  T
Sbjct: 216 LNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVT 275

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +N L+DG  +   V  A +   E++K G++ NIVTYN++++G+C  G + EA  L  KM+
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G K + +T+N +I  +CK+  +  A ++ D +    E  P++I++ +++   C  G M
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV-SKQELVPNVITFNTMIDAYCKEGMM 394

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +E F     ML+EGI PN +T+N L+  L
Sbjct: 395 EEGFSLCSSMLDEGILPNVSTYNCLIAGL 423



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 5/188 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F ++I++Y + G+ E+   +   + + G+ P V  YN ++  L  +        + + M
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +  G++ +V TYNIL+  LCKN++   A KLL EM N G  P+ V+Y T++   C  G++
Sbjct: 440 ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKL 499

Query: 152 EEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A  +  R         V  YN LI G CK +K+E A  LL EM+++G++PN  TY  +
Sbjct: 500 KAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559

Query: 207 ISSLCDVG 214
              + + G
Sbjct: 560 RLEMLEKG 567



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 21/280 (7%)

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPN---------VVAYTCMVKVLCQNNMFHQAH 360
           + +D F K       S +++ ++ +G  P          V+AY   +++ C    F +A 
Sbjct: 99  SFLDSFVK-NEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAK 157

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
               K++  +C P     +  +K     G V++  K   +M +     N+ T+N  ++GL
Sbjct: 158 DYGFKLSLTSCNP---LLSALVKE-NKIGDVEYVYK---EMIKRRIHTNLNTFNIFINGL 210

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR---AGMVVEAFQLLGKMLIEGTK 477
            R  ++ +A + + +++  GI  N+VTYNT++ G C+   AG + +A   + +ML     
Sbjct: 211 CRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKIC 270

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +TFN +I  +CK   V  A +  + ++  G   P+I++Y SL+ G+CN+G ++EA  
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQG-LKPNIVTYNSLINGLCNNGKLEEAID 329

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
              KM+  G+ PN  T+N L+              + DD+
Sbjct: 330 LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV 369



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 71/141 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K ++   + LL +M+ +G+      +  +I+   +   +  A K+   +   G
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP    YN ++D    E +      + + M+++  +PNV TYN+L+K  CK N+++ A 
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAAN 538

Query: 121 KLLVEMGNKGCAPDAVSYTTI 141
            LL EM  KG  P+  +Y  +
Sbjct: 539 GLLNEMLEKGLNPNRTTYDIV 559


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 257/503 (51%), Gaps = 34/503 (6%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +AL +F  + E    P++  +  +L+ +    +F ++  +  +++  G+  +++T N+L+
Sbjct: 54  EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLM 113

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV 167
              C++++   A   L ++   G  PD  ++T+                           
Sbjct: 114 NCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTS--------------------------- 146

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
              LING C  ++IEEA  ++ +MV+ GI P+V+ Y+TII SLC  G+V+ +L +  QM 
Sbjct: 147 ---LINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQME 203

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P++  +TSL+ G    GR  +A  L   M++    P+V+ ++ LI      G + 
Sbjct: 204 NYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLL 263

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A  +  +M + S  PN+ TY++LI+G    G L  A Q++  M + GC P+VVAYT ++
Sbjct: 264 DAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLI 323

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+      A  +  +M+ +    NT+T+ T I+G    G+ + A ++   M      
Sbjct: 324 NGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVP 383

Query: 408 PNITTYNELLDGLL---RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           PNI TYN LL  L    +VN+    FE + + E  G+  NI TYN +LHG+C  G + +A
Sbjct: 384 PNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKA 443

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             + G M      +  IT+ III   CK GKV +A+ L   +   G   P++++YT+++ 
Sbjct: 444 LMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKG-VKPNVVTYTTMIS 502

Query: 525 GICNSGGMQEAFIYLQKMLNEGI 547
           G+   G M EA +  +KM  +G+
Sbjct: 503 GLFREGLMLEAHVLFRKMKEDGV 525



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 230/452 (50%), Gaps = 9/452 (1%)

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALIN 173
           A  L   M      P  + +T +++ I K+ + +    L      M   + +   N L+N
Sbjct: 55  ALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMN 114

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             C+  +   A   L +++  G +P++ T++++I+  C    +E ++ ++ QM   G  P
Sbjct: 115 CFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKP 174

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++  +T+++      G    A  L+N+M   G  P+VV Y++L++GLC++G   +A  + 
Sbjct: 175 DVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLL 234

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M +    P+V T++ALID F K G LL A +++N MI    +PN+  YT ++  LC  
Sbjct: 235 RGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCME 294

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  +   M  + C P+ V + + I G C C +V+ AMK+  +M Q     N  TY
Sbjct: 295 GRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITY 354

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA---FQLLGK 470
             L+ G   V +   A E+   +   G+  NI TYN +LH +C  G V +A   F+ + K
Sbjct: 355 TTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQK 414

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
             I+G   +  T+N++++  C  GK+  A+ +   ++   + +  II+YT ++ G+C +G
Sbjct: 415 REIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKR-DMDIGIITYTIIIQGMCKAG 473

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +++A      + ++G+ PN  T+  ++  LF
Sbjct: 474 KVKDALNLFCSLPSKGVKPNVVTYTTMISGLF 505



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 193/366 (52%), Gaps = 10/366 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            I+    ++ QM   G+     ++ ++I+S  + G  + AL +F ++  +G++P V +Y 
Sbjct: 156 RIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYT 215

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L    R+   + +   M +  ++P+V T+N L+ A  K  ++  A +L  EM   
Sbjct: 216 SLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQM 275

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
             AP+  +YT++++ +C  G+++EAR++     +      V  Y +LING CK  K+E+A
Sbjct: 276 SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDA 335

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EM  +G+  N ITY+T+I     VG    +  + G M  RG  PNI ++  LL  
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHC 395

Query: 245 YLLGGRTHEA----SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
               G+ ++A     D+  R I +G  PN+  Y+ L+HGLC NG +++A+ V   M++  
Sbjct: 396 LCYNGKVNKALMIFEDMQKREI-DGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRD 454

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
               + TY+ +I G  KAG +  A  ++  + S G  PNVV YT M+  L +  +  +AH
Sbjct: 455 MDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAH 514

Query: 361 SLIEKM 366
            L  KM
Sbjct: 515 VLFRKM 520



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 196/380 (51%), Gaps = 8/380 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F S+IN +      E+A+ M  ++ E G+KP V IY  I+D+L           +++ M
Sbjct: 143 TFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQM 202

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +  G+ P+V  Y  L+  LC + R   A  LL  M  +   PD +++  ++ +  K G++
Sbjct: 203 ENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKL 262

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +A+EL      M     +  Y +LINGLC E +++EA  +   M  +G  P+V+ Y+++
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSL 322

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C    VE ++ I  +M  +G   N  ++T+L++G+ L G+ + A +++  M+  G 
Sbjct: 323 INGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGV 382

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE---NSCPPNVTTYSALIDGFAKAGNLLG 323
            PN+  Y+ L+H LC NG +++A+ +   M++   +  PPN+ TY+ L+ G    G L  
Sbjct: 383 PPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEK 442

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  ++  M        ++ YT +++ +C+      A +L   +  +   PN VT+ T I 
Sbjct: 443 ALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMIS 502

Query: 384 GLCGCGRVDWAMKLLDQMKQ 403
           GL   G +  A  L  +MK+
Sbjct: 503 GLFREGLMLEAHVLFRKMKE 522



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 210/440 (47%), Gaps = 8/440 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           + D V  L + +++ GVS        ++N + +      A     ++ + G +P +  + 
Sbjct: 86  KFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFT 145

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++     NR      + + M   G++P+V  Y  ++ +LCKN  VD A  L  +M N 
Sbjct: 146 SLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENY 205

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD V YT++V+ +C  G+  +A  L       +    V  +NALI+   KE K+ +A
Sbjct: 206 GIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDA 265

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L  EM+   I PN+ TY+++I+ LC  G ++ +  +   M  +GC P++ ++TSL+ G
Sbjct: 266 KELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLING 325

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +    +  +A  ++  M ++G   N + Y+TLI G    G  + A  V   M     PPN
Sbjct: 326 FCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPN 385

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMIS---NGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           + TY+ L+      G +  A  I+  M     +G  PN+  Y  ++  LC N    +A  
Sbjct: 386 IRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALM 445

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +   M   +     +T+   I+G+C  G+V  A+ L   +      PN+ TY  ++ GL 
Sbjct: 446 VFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLF 505

Query: 422 RVNRVKEAFELVTEIEKCGI 441
           R   + EA  L  ++++ G+
Sbjct: 506 REGLMLEAHVLFRKMKEDGV 525



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 203/397 (51%), Gaps = 5/397 (1%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L NGL    +  EA  L   MV+    P++I ++ +++ +  +   +  + +   + + G
Sbjct: 43  LRNGL-HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMG 101

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            + ++++   L+  +    +   AS    ++++ GF P++  +++LI+G C    ++EA+
Sbjct: 102 VSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM 161

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S+  QM E    P+V  Y+ +ID   K G++  A  ++N+M + G  P+VV YT +V  L
Sbjct: 162 SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C +  +  A  L+  M      P+ +TFN  I      G++  A +L ++M Q    PNI
Sbjct: 222 CNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNI 281

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  L++GL    R+ EA ++   +E  G   ++V Y ++++G C+   V +A ++  +
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYE 341

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M  +G   + IT+  +I  +   GK N A ++   +   G   P+I +Y  LL  +C +G
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG-VPPNIRTYNVLLHCLCYNG 400

Query: 531 GMQEAFIYLQKMLN---EGICPNFATWNVLVRSLFSN 564
            + +A +  + M     +G+ PN  T+NVL+  L  N
Sbjct: 401 KVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN 437



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 166/325 (51%), Gaps = 1/325 (0%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  +L+  L   + +EA DL++ M+    LP+++ ++ L++ +      D  +++   +
Sbjct: 38  NYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHL 97

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +      ++ T + L++ F ++     AS    +++  G  P++  +T ++   C  N  
Sbjct: 98  QIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRI 157

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A S++ +M      P+ V + T I  LC  G VD A+ L +QM+ Y   P++  Y  L
Sbjct: 158 EEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSL 217

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++GL    R ++A  L+  + K  I+ +++T+N ++    + G +++A +L  +M+    
Sbjct: 218 VNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSI 277

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+  +I   C +G+++ A Q+   +   G + PD+++YTSL+ G C    +++A 
Sbjct: 278 APNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVEDAM 336

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
               +M  +G+  N  T+  L++  
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGF 361



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 2/168 (1%)

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y E+L   L   +  EA +L + + +     +I+ +  +L+ + +         L   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
           I G   D  T N+++  +C+  +   A   L ++   G + PDI ++TSL+ G C    +
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLG-FEPDIFTFTSLINGFCLGNRI 157

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           +EA   + +M+  GI P+   +  ++ SL  N GH+     L + M N
Sbjct: 158 EEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKN-GHVDNALSLFNQMEN 204


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 237/475 (49%), Gaps = 14/475 (2%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+  F R+      P+   +N +L ++      S +  +   M   G+ PN++T +IL+ 
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 109 ALCKNNR--VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           + C  NR  +  A  L  +M  +G  PD V+Y T+++ +CK+G    A  L    GS V 
Sbjct: 105 SFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL---LGSMVQ 161

Query: 167 --------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                    YN +I+ LCK+ ++ EAF L  EMV +GI P++ TY+++I +LC++   + 
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH 221

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLI 277
              +L +M      P++ SF +++      G+  EA D+ ++MI R G +PNV++Y+TLI
Sbjct: 222 VATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLI 281

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           +G C    +D+A+ +  +M      P+  TYS LI G      L  A  +++ M++    
Sbjct: 282 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 341

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           PN+V Y  ++  LC+N    +A +L++ +   N  P+    N  I G+C  G ++ A  L
Sbjct: 342 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 401

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
              +      P++ TY+ +++GL R   + EA +L  E+++ G  LN   YNTI  G  R
Sbjct: 402 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 461

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
                 A QLL +M+  G   DA T  + +      G   +  Q+L        W
Sbjct: 462 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSW 516



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 209/430 (48%), Gaps = 8/430 (1%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV- 213
           R L M+       +N L+  + K         L  +M   GI PN+ T   +I+S C + 
Sbjct: 51  RMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLN 110

Query: 214 -GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +  +L +  +M   G  P++ ++ +L+ G    G T  A  L   M+++   PNV A
Sbjct: 111 RGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFA 170

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+T+I  LC +  + EA ++  +M      P++ TY++LI            + + N M+
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 230

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRV 391
            +   P+VV++  +V  LC+     +AH +++KM     C PN +++NT I G C   R+
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRI 290

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D AM L  +M + E +P+  TY+ L+ GL  V R+++A  L  E+  C    N+VTY  +
Sbjct: 291 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRIL 350

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDA--ITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           L  +C+   + EA  LL    IEG+ LD      NI I   C+ G++  A  L   +   
Sbjct: 351 LDYLCKNRYLAEAMALLKA--IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G   PD+ +Y+ ++ G+C  G + EA    ++M   G   N   +N + R    N     
Sbjct: 409 G-LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 467

Query: 570 PVYILDDIMA 579
            + +L +++A
Sbjct: 468 AIQLLQEMVA 477



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 202/393 (51%), Gaps = 8/393 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRV--GLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           L  QM   G+  +      +INS+  +  G   +AL +F ++   G +P V  Y  +++ 
Sbjct: 83  LSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLING 142

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L      S    +  +M +   +PNVF YN ++ +LCK+ +V  A+ L  EM  KG +PD
Sbjct: 143 LCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 202

Query: 135 AVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
             +Y +++ ++C L + +    L       +    V  +N +++ LCKE K+ EA  ++ 
Sbjct: 203 IFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVD 262

Query: 190 EMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
           +M+ R G  PNVI+Y+T+I+  C +  ++ ++ + G+M  +   P+  ++++L+ G    
Sbjct: 263 KMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 322

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  +A  L++ M+    +PN+V Y  L+  LC N  + EA+++   +E ++  P++   
Sbjct: 323 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 382

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +  IDG  +AG L  A  +++ + S G  P+V  Y+ M+  LC+  +  +A  L  +M  
Sbjct: 383 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 442

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             C  N   +NT  +G         A++LL +M
Sbjct: 443 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 197/397 (49%), Gaps = 11/397 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L  +M  EG       + ++IN   +VG    A+++   + +   +P V  YN I+D+L
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 178

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
             + + +    ++S M   G+ P++FTYN L+ ALC          LL EM +    PD 
Sbjct: 179 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238

Query: 136 VSYTTIVSSICKLGQVEEARELA----MRFG--SGVSVYNALINGLCKEHKIEEAFWLLC 189
           VS+ T+V ++CK G+V EA ++      R G    V  YN LING CK  +I++A +L  
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  + + P+ +TYST+I  LC V  ++ ++ +  +M      PN+ ++  LL  YL   
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD-YLCKN 357

Query: 250 R-THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           R   EA  L   +      P++   +  I G+C  G ++ A  +   +      P+V TY
Sbjct: 358 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 417

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S +I+G  + G L  AS+++  M  NGC+ N   Y  + +   +NN   +A  L+++M  
Sbjct: 418 SIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 477

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMK--LLDQMKQ 403
                +  T   F+K L   G +D ++K  L D  KQ
Sbjct: 478 RGFSADASTMTLFVKMLSDDG-LDQSLKQILRDFCKQ 513



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 158/310 (50%), Gaps = 4/310 (1%)

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           +NRM+R    P+ V ++ L+  +         +S+S+QM+    PPN+ T   LI+ F  
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 318 --AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
              G +  A  ++++MI  G  P+VV Y  ++  LC+      A  L+  M  +NC PN 
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNV 168

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
             +NT I  LC   +V  A  L  +M      P+I TYN L+  L  +   K    L+ E
Sbjct: 169 FAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 228

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL-DAITFNIIIYAYCKQG 494
           +    I  ++V++NT++  +C+ G V EA  ++ KM+  G  + + I++N +I  YCK  
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQ 288

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           +++ A+ L   +    E  PD ++Y++L+ G+C+   +Q+A     +M+     PN  T+
Sbjct: 289 RIDKAMYLFGEM-CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 555 NVLVRSLFSN 564
            +L+  L  N
Sbjct: 348 RILLDYLCKN 357



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 2/279 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++D A+S   +M     PP+   ++ L+   AK  +      + ++M S G  PN+    
Sbjct: 41  TIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLH 100

Query: 345 CMVKVLCQNNM--FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
            ++   C  N     +A  L +KM  E   P+ VT+ T I GLC  G    A++LL  M 
Sbjct: 101 ILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMV 160

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           Q  C PN+  YN ++D L +  +V EAF L +E+   GI  +I TYN+++H +C      
Sbjct: 161 QKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWK 220

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
               LL +M+      D ++FN ++ A CK+GKV  A  ++D++   G   P++ISY +L
Sbjct: 221 HVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTL 280

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + G C    + +A     +M  + + P+  T++ L+  L
Sbjct: 281 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGL 319



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 3/210 (1%)

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           N    A S   +M     PP+TV FN  +  +         + L  QM  +   PNI T 
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 414 NELLDGLLRVNRVK--EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           + L++    +NR K  EA  L  ++   G + ++VTY T+++G+C+ G    A +LLG M
Sbjct: 100 HILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 159

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           + +  + +   +N II + CK  +V  A  L   +   G  +PDI +Y SL+  +CN   
Sbjct: 160 VQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG-ISPDIFTYNSLIHALCNLCE 218

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +     L +M++  I P+  ++N +V +L
Sbjct: 219 WKHVATLLNEMVDSKIMPDVVSFNTVVDAL 248



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 5/210 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID   YL  +M  + +      + ++I+    V   + A+ +F+ +      P +  Y 
Sbjct: 289 RIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR 348

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +LD L      +    +   ++   ++P++   NI +  +C+   ++ A  L   + +K
Sbjct: 349 ILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEA 184
           G  PD  +Y+ +++ +C+ G ++EA +L      +G +    +YN +  G  + ++   A
Sbjct: 409 GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRA 468

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             LL EMV RG   +  T +  +  L D G
Sbjct: 469 IQLLQEMVARGFSADASTMTLFVKMLSDDG 498


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 282/537 (52%), Gaps = 25/537 (4%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+NS    G  + A  M ++++   L P V  YN IL   + + RF     +  +M+++G
Sbjct: 231 VLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNG 289

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +E +V+TYNI++  LCK  R   AY LL  M     APD  +Y T++       ++  A 
Sbjct: 290 VEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAI 349

Query: 156 EL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            +    +R G    ++ Y  LI+G C+   I+EA  +L EM   G+ P+ +TYS +++  
Sbjct: 350 HIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLN-- 407

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
              G+V  +  +   M   GC+P+++++ +LL+G   GG   +A +  + ++    +P+ 
Sbjct: 408 ---GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVH---IPSA 461

Query: 271 VAYST---LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           +   T   L+ G+C++GS+DEA+ +  +M   +  P++ TY+ L+ GF + G ++ A  +
Sbjct: 462 IDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVIL 521

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK-MAFENCPPNTVTFNTFIKGLC 386
              M+  G  P++V YTC++K L +      A  L ++ +  E    + + +N+ + G  
Sbjct: 522 LQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYL 581

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G++      +  M Q +  PN  +YN L+ G ++   +  +  L  ++ + GI+   V
Sbjct: 582 KAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNV 641

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY  ++ G+ + GM+  A + L KM++EG   D ++F+++I A+ ++ ++++A+QL + +
Sbjct: 642 TYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCM 701

Query: 507 RGGGEW---NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +    W   +P   +Y++++ G+     +Q +   L+ M+  G+ P    +  L+ +
Sbjct: 702 K----WLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINA 754



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/632 (23%), Positives = 294/632 (46%), Gaps = 72/632 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M+  GV      +  +I+   ++  +  A  +  R+R   L P    YN ++    
Sbjct: 281 VLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFF 340

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM---GNK---- 129
            E++  +   I++ M R G++P++ TY  L+   C+N  +D A ++L EM   G K    
Sbjct: 341 DESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEV 400

Query: 130 -----------------------GCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGS 163
                                  GC+PD  +Y  ++  +CK G + +A+E     +   S
Sbjct: 401 TYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPS 460

Query: 164 GVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
            +     NAL+ G+C    ++EA  L  +MV     P++ TY+ ++S  C  G +  ++ 
Sbjct: 461 AIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVI 520

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGL 280
           +L  M  +G  P+I ++T LLKG +  G+   AS L+  +I +EG   + +AY+++++G 
Sbjct: 521 LLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGY 580

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              G + +     Y M +N   PN  +Y+ L+ G  K G+L  +  ++  M+  G  P  
Sbjct: 581 LKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTN 640

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++  L ++ M   A   ++KM  E   P+ ++F+  I       R+  A++L + 
Sbjct: 641 VTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNC 700

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           MK     P+  TY+ +++GL+R N ++ + +++ ++ + G++     Y  +++  CR G 
Sbjct: 701 MKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGD 760

Query: 461 VVEAFQLLGKM----------------------------------LIEGTKLDAI-TFNI 485
           +  AF+L  +M                                  +I    +  I TF  
Sbjct: 761 INGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTT 820

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +++  CK+ K+++A+ L   +   G    D+++Y  L+ G+C    + +A    ++M ++
Sbjct: 821 LMHGLCKEAKISDALHLKSLMESCG-LKIDVVTYNVLITGLCKIQCVSDALELYEEMKSK 879

Query: 546 GICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           G+ PN  T+  L  +++     L    +L+DI
Sbjct: 880 GLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDI 911



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/578 (24%), Positives = 275/578 (47%), Gaps = 47/578 (8%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           ++  +M  +G+  S   + ++I+ Y R G  ++AL++ Y ++  G+KP+   Y+ +L+  
Sbjct: 350 HIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGS 409

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           + E  FS    +Y NM++ G  P+V+TY  LL+ LCK   +  A + +  + +   A D 
Sbjct: 410 VHEA-FS----VYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQ 464

Query: 136 VSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            +   ++  IC  G ++EA +L      + F   +  Y  L++G C++ KI  A  LL  
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQM 524

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLLGG 249
           M+++G+ P+++TY+ ++  L   G V+ +  +  ++  + G   +  ++ S++ GYL  G
Sbjct: 525 MLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAG 584

Query: 250 RTHEAS-----------------------------------DLWNRMIREGFLPNVVAYS 274
           + H+                                      L+  M+R+G  P  V Y 
Sbjct: 585 KLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYR 644

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI GL  +G ++ AV    +M      P+  ++  LI+ F++   +  A Q++N M   
Sbjct: 645 LLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWL 704

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
             SP+   Y+ M+  L + N    +  ++  M      P    +   I   C  G ++ A
Sbjct: 705 YMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGA 764

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            +L ++M     +P     + ++ GL +  +V+E   +   I + G+   I T+ T++HG
Sbjct: 765 FRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHG 824

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +C+   + +A  L   M   G K+D +T+N++I   CK   V++A++L + ++  G   P
Sbjct: 825 LCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKG-LRP 883

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           ++ +YT+L   I  +G   E    L  + + G+ P++ 
Sbjct: 884 NVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPSYT 921



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 277/586 (47%), Gaps = 67/586 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ + + G SCS  VF S++ +  R                    P V  ++ +++A +
Sbjct: 126 LLKHLAMTGFSCS-AVFSSLLCTISRCDS----------------NPLV--FDLLVNAYV 166

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R    +     M   G + +    N +L AL +       +  L E   +    D  
Sbjct: 167 KEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDVT 226

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           +   +++S+C  G ++ A+ +  +  S     V  YN +++   K+ + + A  +L +M 
Sbjct: 227 TCNIVLNSMCIEGNLKGAKHMIHKMKSCSLPNVITYNTILHWYVKKGRFKAAMCVLEDME 286

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G++ +V TY+ +I  LC +     +  +L +M      P+  ++ +L+KG+    +  
Sbjct: 287 KNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMM 346

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A  ++N M+R+G  P++  Y+TLI G C NG++DEA+ V Y+M+     P+  TYSA++
Sbjct: 347 LAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAML 406

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAY--------------------TCMVKV--- 349
           +     G++  A  +++ M   GCSP+V  Y                    +C+V +   
Sbjct: 407 N-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSA 461

Query: 350 ------------LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
                       +C +    +A  L EKM   N  P+  T+   + G C  G++  A+ L
Sbjct: 462 IDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVIL 521

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQLNIVTYNTILHGVC 456
           L  M +   +P+I TY  LL GL++  +VK A  L  EI  K G+  + + YN++++G  
Sbjct: 522 LQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYL 581

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPD 515
           +AG + +    +  M       +  ++NI+++ + K+G ++ +I L  D +R G    P 
Sbjct: 582 KAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKG--IKPT 639

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            ++Y  L+ G+   G ++ A  +L KM+ EGI P+  +++VL+ + 
Sbjct: 640 NVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAF 685



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 227/490 (46%), Gaps = 21/490 (4%)

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S ++R G+E     Y +  + L +      A  LL  +   G +  AV +++++ +I   
Sbjct: 93  SIVQRSGLERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTGFSCSAV-FSSLLCTIS-- 149

Query: 149 GQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                      R  S   V++ L+N   KE ++ +A   +  M + G   +    + +++
Sbjct: 150 -----------RCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLN 198

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           +L ++G  +     L +  VR    ++ +   +L    + G    A  + ++M +   LP
Sbjct: 199 ALVEIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKM-KSCSLP 257

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           NV+ Y+T++H     G    A+ V   ME+N    +V TY+ +ID   K      A  + 
Sbjct: 258 NVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLL 317

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            RM  +  +P+   Y  ++K     +    A  +  +M  +   P+  T+ T I G C  
Sbjct: 318 KRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRN 377

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G +D A+++L +M+     P+  TY+ +L+G      V EAF +   +EK G   ++ TY
Sbjct: 378 GTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVYDNMEKYGCSPDVYTY 432

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             +L G+C+ G +V+A + +  ++   + +D  T N ++   C  G ++ A+ L +++  
Sbjct: 433 RNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVT 492

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
              + PDI +YT LL G C  G +  A I LQ ML +G+ P+  T+  L++ L       
Sbjct: 493 IN-FIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVK 551

Query: 569 GPVYILDDIM 578
              Y+  +I+
Sbjct: 552 AASYLFQEII 561



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 40/274 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    EK  +     L   MK   +S S   + ++IN   R    + +  +   + E G
Sbjct: 681 LINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESG 740

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P    + H                                Y  L+ A C+   ++GA+
Sbjct: 741 LEPK---HTH--------------------------------YIALINAKCRFGDINGAF 765

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
           +L  EM   G  P  V+ ++IV  + K G+VEE   +    +R G    ++ +  L++GL
Sbjct: 766 RLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGL 825

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE KI +A  L   M   G+  +V+TY+ +I+ LC +  V  +L +  +M  +G  PN+
Sbjct: 826 CKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNV 885

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            ++T+L +     GRT E   L N +   G +P+
Sbjct: 886 TTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS 919


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 264/551 (47%), Gaps = 31/551 (5%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G+ P V   + IL       + +    ++  M   G++PN  +Y  ++ +L K+ RV  A
Sbjct: 5   GIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEA 64

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALING 174
           + L  +M  +G + D V+ TT++  + K+G+ +EA E     L +        Y+AL++G
Sbjct: 65  FNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDG 124

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK  K+E A  +L +M    + PNVIT+S+II+     G +  ++ +L +M  R   PN
Sbjct: 125 YCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPN 184

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
              +  L+ GY   G    A D    M       + V +  L++ L   G MDEA S+  
Sbjct: 185 TIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLII 244

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            M      P++  Y++LIDG+ K GN L A  I   M       +VVAY  ++K L +  
Sbjct: 245 DMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLG 304

Query: 355 MF--------------------HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
            +                      A  ++ +M      PN VT+N  I GLC  G V+ A
Sbjct: 305 KYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKA 364

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
              LD+M   E +P   T+  L+    R  +  +  ++  ++   G++L++  YNT++  
Sbjct: 365 ESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITV 424

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            CR GM  +A  +L +M+  G   D +T+N +I  YC    V  A++   ++   G   P
Sbjct: 425 FCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDG-IAP 483

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNE----GICPNFATWNVLVRSLFSNLGHLGP 570
           +I +Y +LL G+ N+G M+E     +K+++E    G+ PN AT+++LV S +  +G+   
Sbjct: 484 NITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILV-SGYGRVGNRKK 542

Query: 571 VYILDDIMANK 581
             IL   M  K
Sbjct: 543 TIILHIEMITK 553



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 260/541 (48%), Gaps = 30/541 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM V G+S       +V++   +VG  ++A ++F  I +  L P    Y+ +LD   
Sbjct: 67  LQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYC 126

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +  +   +   M+++ + PNV T++ ++    K   +  A  +L EM  +   P+ +
Sbjct: 127 KLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTI 186

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  ++    K G+ + A +      + R      +++ L+N L +  +++EA  L+ +M
Sbjct: 187 VYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDM 246

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR- 250
             +GIDP+++ Y+++I      GN   +L I+ +M  +    ++ ++ +L+KG L  G+ 
Sbjct: 247 YSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY 306

Query: 251 -------------------THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
                              T +A D+ N M   G +PN V Y+ LI GLC  G++++A S
Sbjct: 307 DPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAES 366

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
              +M      P   T+  L+  ++++       QI  +++++G   ++  Y  ++ V C
Sbjct: 367 ALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFC 426

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +  M  +A  ++++M       + VT+N  I+G C    V+ A+K   QM      PNIT
Sbjct: 427 RLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNIT 486

Query: 412 TYNELLDGL----LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           TYN LL GL    L    ++E  +LV+E+ + G+  N  TY+ ++ G  R G   +   L
Sbjct: 487 TYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIIL 546

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M+ +G      T+N++I  Y K GK+  A +LL+ +   G   P+  +Y  L  G  
Sbjct: 547 HIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRI-PNSFTYDILTCGWL 605

Query: 528 N 528
           N
Sbjct: 606 N 606



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 232/514 (45%), Gaps = 71/514 (13%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   ++  + +LQ+M+ E V  +   F S+IN Y + G+  +A+ +   + +  + P
Sbjct: 127 KLGK---MELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 183

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
              +Y  ++D         + +     MK   +E +   ++ILL  L +  R+D A  L+
Sbjct: 184 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLI 243

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQ-------VEEARELAMRFGSGVSVYNALINGLC 176
           ++M +KG  PD V+Y +++    K G        V+E +E  +RF   V  YNALI GL 
Sbjct: 244 IDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRF--DVVAYNALIKGLL 301

Query: 177 K--------------------EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +                    + K E+A  +L EM   GI PN +TY+ +I  LC  G V
Sbjct: 302 RLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAV 361

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +   L +M V    P   +   L+K Y    +  +   +  +++  G   ++  Y+TL
Sbjct: 362 EKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTL 421

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I   C  G   +A  V  +M +     ++ TY+ALI G+    ++  A + +++M  +G 
Sbjct: 422 ITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGI 481

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG----RVD 392
           +PN+                                    T+NT + GL   G     ++
Sbjct: 482 APNI-----------------------------------TTYNTLLGGLSNAGLMEEMME 506

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
              KL+ +M +   +PN  TY+ L+ G  RV   K+   L  E+   G    + TYN ++
Sbjct: 507 ETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLI 566

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
               ++G ++EA +LL  +L +G   ++ T++I+
Sbjct: 567 SDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 600



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 187/390 (47%), Gaps = 21/390 (5%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+  GI P+V+T S+I+   C  G +  +  +  +M+  G +PN  S+ +++      GR
Sbjct: 1   MIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGR 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA +L ++M+  G   ++V  +T++ GL   G   EA  V   + + +  PN  TYSA
Sbjct: 61  VMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSA 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+DG+ K G +  A  +  +M      PNV+ ++ ++    +  M  +A  ++ +M   N
Sbjct: 121 LLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRN 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PNT+ +   I G    G  D A     +MK      +   ++ LL+ L RV R+ EA 
Sbjct: 181 VMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEAR 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L+ ++   GI  +IV Y +++ G  + G  + A  ++ +M  +  + D + +N +I   
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGL 300

Query: 491 CKQGKVN--------------------NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
            + GK +                    +A+ +L+ ++  G   P+ ++Y  L+ G+C +G
Sbjct: 301 LRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYG-IMPNAVTYNILIGGLCKTG 359

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +++A   L +ML     P   T   LV++
Sbjct: 360 AVEKAESALDEMLVMEFVPTPITHKFLVKA 389



 Score = 42.0 bits (97), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 14/127 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G+  +   +  +++ Y RVG  ++ + +   +   G  PT+K YN ++    
Sbjct: 511 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 570

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILL-------------KALCKNNRVDGAYKLL 123
              +      + +++   G  PN FTY+IL              ++L ++  ++   KLL
Sbjct: 571 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEIE-VKKLL 629

Query: 124 VEMGNKG 130
           +EMG KG
Sbjct: 630 IEMGRKG 636


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/592 (25%), Positives = 279/592 (47%), Gaps = 43/592 (7%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            D    L   M   G S +    +  IN Y + G + +A++ +  ++  G+ P V   N 
Sbjct: 404 FDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANA 463

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L +L    R  M   ++  +K  G+ P+  TY +++K   K ++ D A     +M   G
Sbjct: 464 VLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETG 523

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
           C PD ++  +++ ++ K G+  EA +L      M+       YN L++GL +E K++E  
Sbjct: 524 CVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVM 583

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM      PN+ITY+T++  L   G V  ++G+L  M  +GC P++ S+ +++ G 
Sbjct: 584 HLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGL 643

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV-SVSYQMEENSCPPN 304
           +   R  EA  ++ +M ++   P+     T++     NG M EA+ +V   + +  C  +
Sbjct: 644 IKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTD 702

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
            +++ +L++G      +  + +    + S G   N      +++ LC++    +AH L  
Sbjct: 703 KSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFN 762

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           K         T ++N+ I+GL     +D A  L  +MK+  C P+  TYN +LD + +  
Sbjct: 763 KFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSM 822

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTI--------------------------------- 451
           R++E   +  E+ + G +   VTYNTI                                 
Sbjct: 823 RIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYG 882

Query: 452 --LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
             L G+ +AG +V+A  L  +ML  G K +   +NI++  +   G   N  Q+ +++   
Sbjct: 883 PLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQ 942

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G  NPDI SYT L+  +C +G + +   Y +++L  G+ P+   +N+L+  L
Sbjct: 943 G-INPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL 993



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 277/555 (49%), Gaps = 8/555 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  M+  G+S +   +  +I    + G   +A++++  + E G+ P+V+ Y+ ++ +   
Sbjct: 166 LPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGK 225

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +     +  + + M+  G++PNV++Y I ++ L +  R D AY++L +M + GC PD V+
Sbjct: 226 KRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVT 285

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
           +T ++  +C  G++ +A+++  +  +         Y  L++        +    +   MV
Sbjct: 286 HTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMV 345

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + N+++Y+ ++ +LC VG ++ +L +  +M  +G +P  +S+ SL+ G+L      
Sbjct: 346 ADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFD 405

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A +L+N M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 406 RALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVL 465

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
              A++G L  A +++  +   G SP+ + YT M+K   + +   +A +    M    C 
Sbjct: 466 SSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCV 525

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   G+ + A KL  Q+K+ +  P   TYN LL GL R  +VKE   L
Sbjct: 526 PDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHL 585

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+       N++TYNT+L  + + G V  A  +L  M  +G   D  ++N ++Y   K
Sbjct: 586 LEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIK 645

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNF 551
           + +   A ++  +++      PD  +  ++L     +G M+EA   +++ + +  C  + 
Sbjct: 646 EERFEEAFRMFCQMK--KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDK 703

Query: 552 ATWNVLVRSLFSNLG 566
           ++++ L+  + +  G
Sbjct: 704 SSFHSLMEGILNKAG 718



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/599 (25%), Positives = 267/599 (44%), Gaps = 67/599 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E +     +  +  +   M+ + V  + G F +V +     G    A      +RE G
Sbjct: 114 MLELMRAHGRVGDMAQVFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAG 173

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++  L+     +    +Y  M  DG+ P+V TY++L+ +  K   VD   
Sbjct: 174 MSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVL 233

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            LL EM  +G  P+  SYT  +     LGQ       A RF                   
Sbjct: 234 WLLNEMEARGVKPNVYSYTICIRV---LGQ-------AARF------------------- 264

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            +EA+ +L +M D G  P+V+T++ +I  LCD G +  +  +  +M      P+  ++ +
Sbjct: 265 -DEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYIT 323

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL      G +    ++WN M+ +G+  N+V+Y+ ++  LC  G +DEA++V  +M+E  
Sbjct: 324 LLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKG 383

Query: 301 CPPNVTTYSALIDGFAKA-----------------------------------GNLLGAS 325
             P   +Y++LI GF KA                                   G  L A 
Sbjct: 384 ISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 443

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           Q +  M S G  P+V A   ++  L ++     A  +  ++      P+T+T+   IK  
Sbjct: 444 QRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCC 503

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
               + D AM     M +  C+P++   N L+D L +  +  EA++L  ++++  I+   
Sbjct: 504 SKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTN 563

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TYNT+L G+ R G V E   LL +M       + IT+N ++    K G+VN AI +L  
Sbjct: 564 GTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYS 623

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +   G   PD+ SY ++++G+      +EAF    +M  + + P++AT   ++ S   N
Sbjct: 624 MTEKG-CTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKN 680



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/581 (24%), Positives = 254/581 (43%), Gaps = 69/581 (11%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I++  + G   +A K+F++++E  ++PT   YN +L  L  E +   +  +   M   
Sbjct: 533  SLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHS 592

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
               PN+ TYN +L  L KN  V+ A  +L  M  KGC PD                    
Sbjct: 593  IHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPD-------------------- 632

Query: 155  RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                      +S YN ++ GL KE + EEAF + C+M  + + P+  T  TI+ S    G
Sbjct: 633  ----------LSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKNG 681

Query: 215  NVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGG------------------------ 249
             ++ +L  + +  ++  CN +  SF SL++G L                           
Sbjct: 682  LMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFL 741

Query: 250  -----------RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                       +  EA  L+N+    G      +Y++LI GL     +D A  +  +M+ 
Sbjct: 742  CPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKR 801

Query: 299  NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
              C P+  TY+ ++D   K+  +    ++   M   G     V Y  ++  L ++    Q
Sbjct: 802  LGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQ 861

Query: 359  AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
            A  L   +  E   P   T+   + GL   G++  A  L ++M +Y C PN T YN LL+
Sbjct: 862  AIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLN 921

Query: 419  GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            G       +   ++  ++ + GI  +I +Y  ++  +C AG + +      ++L  G + 
Sbjct: 922  GHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEP 981

Query: 479  DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
            D I +N++I    K  ++  A+ L + ++  G   P++ +Y SL+  +  +G   EA   
Sbjct: 982  DLIIYNLLIDGLGKSERIEEAVCLFNEMKKKG-IVPNLYTYNSLILHLGKAGKASEAAQM 1040

Query: 539  LQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
             +++L +G  PN  T+N L+R  +S  G     Y   D +A
Sbjct: 1041 YEELLIKGWKPNVFTYNALIRG-YSVSGSTDNAYAAYDCVA 1080



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/557 (23%), Positives = 257/557 (46%), Gaps = 31/557 (5%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
            G+K ++D V +LL +M+  GV  +   +   I    +    ++A ++  ++ + G KP 
Sbjct: 223 FGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPD 282

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  +  ++  L    R S    ++  MK    +P+  TY  LL     +       ++  
Sbjct: 283 VVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWN 342

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEA 184
            M   G   + VSYT +V ++C++G+++EA          ++V++               
Sbjct: 343 AMVADGYNDNIVSYTAVVDALCQVGRLDEA----------LAVFD--------------- 377

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                EM ++GI P   +Y+++IS        + +L +   M   G +PN ++    +  
Sbjct: 378 -----EMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINY 432

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G++ +A   +  M  +G +P+V A + ++  L  +G +  A  V Y++++    P+
Sbjct: 433 YGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPD 492

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY+ +I   +KA     A   ++ M+  GC P+V+A   ++  L +    ++A  L  
Sbjct: 493 TITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFH 552

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           ++      P   T+NT + GL   G+V   M LL++M      PN+ TYN +LD L +  
Sbjct: 553 QLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNG 612

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            V  A  ++  + + G   ++ +YNT+++G+ +     EAF++  +M  +    D  T  
Sbjct: 613 EVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMK-KILAPDYATLC 671

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            I+ ++ K G +  A+  +       + N D  S+ SL+ GI N  G++++  + + + +
Sbjct: 672 TILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIAS 731

Query: 545 EGICPNFATWNVLVRSL 561
            GI  N      L+R L
Sbjct: 732 RGILLNDFFLCPLIRHL 748



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 253/577 (43%), Gaps = 72/577 (12%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG + ++  V +LL++M       +   + +V++   + G    A+ M Y + E G
Sbjct: 569  LLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKG 628

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P +  YN ++  L+ E RF     ++  MK+  + P+  T   +L +  KN  +  A 
Sbjct: 629  CTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEAL 687

Query: 121  KLLVEMGNKG-CAPDAVSYTTIVSSI---------------------------------- 145
              + E   K  C  D  S+ +++  I                                  
Sbjct: 688  HTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRH 747

Query: 146  -CKLGQVEEARELAMRF-GSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
             CK  +  EA +L  +F G GVS+    YN+LI GL  E+ I+ A  L  EM   G  P+
Sbjct: 748  LCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPD 807

Query: 200  VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
              TY+ I+ ++     +E  L +  +M  +G      ++ +++ G +   R  +A DL+ 
Sbjct: 808  EFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYY 867

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             ++ EGF P    Y  L+ GL   G M +A ++  +M E  C PN T Y+ L++G   AG
Sbjct: 868  NLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAG 927

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            N     QI+ +M+  G +P++ +YT ++  LC     +   S   ++      P+ + +N
Sbjct: 928  NTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYN 987

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I GL    R++ A+ L ++MK+   +PN+ TYN L+  L +  +  EA ++  E+   
Sbjct: 988  LLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIK 1047

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQ------------------------------LLG 469
            G + N+ TYN ++ G   +G    A+                               L  
Sbjct: 1048 GWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFA 1107

Query: 470  KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            +M   G   D  T+N+I+ A  K  ++   +++ + I
Sbjct: 1108 EMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEI 1144



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 207/406 (50%), Gaps = 12/406 (2%)

Query: 46   AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
            A +A ++F + +  G+      YN ++  L+ EN   +   +++ MKR G  P+ FTYN+
Sbjct: 754  ALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNL 813

Query: 106  LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMR 160
            +L A+ K+ R++   ++  EM  KG     V+Y TI+S + K  ++E+A +L     +  
Sbjct: 814  ILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 873

Query: 161  FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
            F      Y  L++GL K  K+ +A  L  EM++ G  PN   Y+ +++     GN E   
Sbjct: 874  FSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVC 933

Query: 221  GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
             I  +M  +G NP+I S+T L+      GR ++    + +++  G  P+++ Y+ LI GL
Sbjct: 934  QIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGL 993

Query: 281  CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              +  ++EAV +  +M++    PN+ TY++LI    KAG    A+Q++  ++  G  PNV
Sbjct: 994  GKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNV 1053

Query: 341  VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT-FIKGLCGCGRVDWAMKLLD 399
              Y  +++    +     A+      A  +C    V+  T  I GL     ++ A  L  
Sbjct: 1054 FTYNALIRGYSVSGSTDNAY------AAYDCVAVGVSLKTALISGLVDENLINIAEGLFA 1107

Query: 400  QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
            +MK+  C P+  TYN +LD + +  R++E  ++  EI +   QL +
Sbjct: 1108 EMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLNQLTL 1153



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/599 (22%), Positives = 270/599 (45%), Gaps = 43/599 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K G+  +   V  +   M  +G + +   + +V+++  +VG  ++AL +F  ++E G
Sbjct: 324 LLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKG 383

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN ++   L  + F     ++++M   G  PN +T+ + +    K+ +   A 
Sbjct: 384 ISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 443

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           +    M +KG  PD  +   ++SS+ + G++  A+ +       GVS     Y  +I   
Sbjct: 444 QRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCC 503

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K +EA     +MV+ G  P+V+  +++I +L   G    +  +  Q+      P  
Sbjct: 504 SKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTN 563

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL G    G+  E   L   M      PN++ Y+T++  L  NG ++ A+ + Y 
Sbjct: 564 GTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYS 623

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E  C P++++Y+ ++ G  K      A +++ +M     +P+      ++    +N +
Sbjct: 624 MTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGL 682

Query: 356 FHQA-HSLIEKMAFENCPPNTVTFNTFIKG------------------------------ 384
             +A H++ E +   +C  +  +F++ ++G                              
Sbjct: 683 MKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLC 742

Query: 385 -----LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
                LC   +   A +L ++ K         +YN L+ GL+  N +  A +L TE+++ 
Sbjct: 743 PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 802

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   +  TYN IL  + ++  + E  ++  +M  +G +   +T+N II    K  ++  A
Sbjct: 803 GCGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQA 862

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I L   +   G ++P   +Y  LL G+  +G M +A     +ML  G  PN   +N+L+
Sbjct: 863 IDLYYNLMSEG-FSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILL 920



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/601 (21%), Positives = 254/601 (42%), Gaps = 43/601 (7%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I  LG+    D    +L +M+  G          VI      G    A  +F++++    
Sbjct: 255 IRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQ 314

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP    Y  +LD          +  I++ M  DG   N+ +Y  ++ ALC+  R+D A  
Sbjct: 315 KPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALA 374

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------------------ 163
           +  EM  KG +P+  SY +++S   K    + A EL     +                  
Sbjct: 375 VFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 434

Query: 164 ----------------------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
                                  V+  NA+++ L +  ++  A  +  E+ D G+ P+ I
Sbjct: 435 KSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTI 494

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+ +I         + ++     M   GC P++ +  SL+     GG+ +EA  L++++
Sbjct: 495 TYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQL 554

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
                 P    Y+TL+ GL   G + E + +  +M  +  PPN+ TY+ ++D  +K G +
Sbjct: 555 KEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEV 614

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +   M   GC+P++ +Y  ++  L +   F +A  +  +M  +   P+  T  T 
Sbjct: 615 NCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMK-KILAPDYATLCTI 673

Query: 382 IKGLCGCGRVDWAMKLLDQ-MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
           +      G +  A+  + + + + +C  + ++++ L++G+L    V+++ E    I   G
Sbjct: 674 LPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRG 733

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I LN      ++  +C+    +EA QL  K    G  L   ++N +I     +  ++ A 
Sbjct: 734 ILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAE 793

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            L   ++  G   PD  +Y  +L  +  S  ++E      +M  +G    + T+N ++  
Sbjct: 794 DLFTEMKRLG-CGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISG 852

Query: 561 L 561
           L
Sbjct: 853 L 853


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 265/546 (48%), Gaps = 9/546 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + +++ M   GV      F  ++ SY R G    A+++   ++  G  P + I N  
Sbjct: 143 DPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVA 202

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L+   R          M+R G+EP+V TYN L+K LC   RV  A +++  M   GC
Sbjct: 203 VNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGC 262

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV----SVYNALINGLCKEHKIEEAF 185
            PD +SY T++S +CK  +V E R L   MR  +G+      YN LI+ L K    +EA 
Sbjct: 263 PPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEAL 322

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             L E   +    + + YS ++ S C  G +  +  I+G+M  + C+P++ ++++++ G+
Sbjct: 323 EFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGF 382

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   +A  +   M + G  PN+V ++ L++GLC  G   EA  +  +  E+   P+ 
Sbjct: 383 CRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSD 442

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TYS ++ GF + G L  +  +  +M+  G  P  V    ++  LC+     +A   +E+
Sbjct: 443 ITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQ 502

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              + C  N V F T I G    G ++ A+ LLD +      P++ TY  +++ L R  R
Sbjct: 503 CQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGR 562

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           +KEA  LV ++   G+   +VTY T++H  C  G V E   LL KML    +L ++ +N 
Sbjct: 563 LKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLAR-QELKSV-YNQ 620

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I   C  GK+N A  LL ++        D  +   L+    N G   +A+    +M   
Sbjct: 621 VIEKLCAFGKLNEAYGLLSKVLRTASQR-DAQTCHILMESFLNRGLTIQAYNVACRMFQR 679

Query: 546 GICPNF 551
            + P+ 
Sbjct: 680 NLIPDL 685



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 236/507 (46%), Gaps = 8/507 (1%)

Query: 44  GLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           G A  A + F +  R++  +   ++++ +L  L           +   M R G+      
Sbjct: 104 GDARAAFEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQ 163

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           +  L+ +  +  ++  A ++L  M   GCAPD       V+ +   G+V++A   A R  
Sbjct: 164 FAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMR 223

Query: 163 S-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                  V  YN LI GLC   ++ EA  ++  M+  G  P+ I+Y T++S LC    V 
Sbjct: 224 RVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVS 283

Query: 218 TSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
               +L  M    G   +  ++  L+      G   EA +       + F  + V YS +
Sbjct: 284 EVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAV 343

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +H  C NG M EA  +  +M    C P+V TYSA++DGF + G +  A ++   M  NGC
Sbjct: 344 VHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGC 403

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN+V +T ++  LC+     +A  L+ K   +   P+ +T++  + G    G++  +  
Sbjct: 404 KPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCD 463

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           ++ QM Q    P     N L+  L +  +  EA E + + +  G  +N+V + T++HG  
Sbjct: 464 VVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFS 523

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           R G +  A  LL  + +     D +T+ +++ A  ++G++  A  L++++   G   P +
Sbjct: 524 RQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRG-LVPTL 582

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKML 543
           ++Y +++   C  G ++E    L KML
Sbjct: 583 VTYRTVIHRYCEKGTVEELVDLLDKML 609



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 256/541 (47%), Gaps = 10/541 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  ++    R  L + A ++   +   G++   + + H++ +     +      +   M
Sbjct: 128 VFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLM 187

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + DG  P++   N+ +  L    RVD A      M   G  PD V+Y  ++  +C + +V
Sbjct: 188 QTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRV 247

Query: 152 EEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMV-DRGIDPNVITYST 205
            EA E+  +   +G       Y  +++ LCKE ++ E   LL  M  D G+  + +TY+ 
Sbjct: 248 VEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNM 307

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  L   G+ + +L  L +   +    +   +++++  + L GR  EA ++   MI + 
Sbjct: 308 LIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKE 367

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV YS ++ G C  G +D+A  +   M +N C PN+ T++AL++G  K G    A 
Sbjct: 368 CHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAW 427

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ N+   +  +P+ + Y+ ++    +     ++  ++ +M  +   P TV  N  I  L
Sbjct: 428 ELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHAL 487

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G+   A + ++Q +   C  N+  +  ++ G  R   ++ A  L+ ++       ++
Sbjct: 488 CKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDV 547

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           VTY  +++ + R G + EA  L+ KML  G     +T+  +I+ YC++G V   + LLD+
Sbjct: 548 VTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDK 607

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           +    E       Y  ++  +C  G + EA+  L K+L      +  T ++L+ S F N 
Sbjct: 608 MLARQELKS---VYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMES-FLNR 663

Query: 566 G 566
           G
Sbjct: 664 G 664



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 152/331 (45%), Gaps = 7/331 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EID  + +++ M   G   +     +++N   +VG + +A ++  +  E    P+   Y+
Sbjct: 387 EIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYS 446

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E +      + + M + G  P     N+L+ ALCK  +   A + + +  +K
Sbjct: 447 VVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSK 506

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEA 184
           GC  + V++TT++    + G +E A  L            V  Y  ++N L ++ +++EA
Sbjct: 507 GCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEA 566

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+ +M++RG+ P ++TY T+I   C+ G VE  + +L +M  R    ++  +  +++ 
Sbjct: 567 TGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLARQELKSV--YNQVIEK 624

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+ +EA  L ++++R     +      L+    + G   +A +V+ +M + +  P+
Sbjct: 625 LCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLIPD 684

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +     + D          A ++  + +  G
Sbjct: 685 LKLCQKVDDRLVLEERKQAAGKLIVKFVERG 715



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 3/173 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+V TY +++ AL +  R+  A  L+ +M N+G  P  V+Y T++   C+ G VEE  +L
Sbjct: 545 PDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDL 604

Query: 158 AMRFGSG---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             +  +     SVYN +I  LC   K+ EA+ LL +++      +  T   ++ S  + G
Sbjct: 605 LDKMLARQELKSVYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRG 664

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
               +  +  +MF R   P++     +    +L  R   A  L  + +  G L
Sbjct: 665 LTIQAYNVACRMFQRNLIPDLKLCQKVDDRLVLEERKQAAGKLIVKFVERGLL 717


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 267/559 (47%), Gaps = 7/559 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIRE-FGLKPTVKIYNHIL 72
           ++ LL+ MK + +  +      VI++Y   GL ++AL+++  + +     P V   N +L
Sbjct: 115 IENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLL 174

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           + L+   +  +   +Y  M     + + +T  I+ K LCK  +V+    L+ +   KGC 
Sbjct: 175 NLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCV 234

Query: 133 PDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWL 187
           P+ V Y T++   CK G +E A    +EL ++ F   V  Y A+IN  CK+ K E    L
Sbjct: 235 PNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKL 294

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L EM +RG+  ++  ++ II +    G    +   +  M   GC P++ ++ +L+ G   
Sbjct: 295 LVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCS 354

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G+  EA +L    IR G  PN  +Y+ LIH    NG    A  +  +M E     ++  
Sbjct: 355 KGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIA 414

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y AL+ G   AG +  A  + ++M+  G  P+   Y  ++  LC+   F  A  L+ +M 
Sbjct: 415 YGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEML 474

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +N  P+     T + G    G +D A KL     +     ++   N ++ G  +   + 
Sbjct: 475 DQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMN 534

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A      +       +  TY+TI+ G  +   +  A ++ G ML +  K + +TF  +I
Sbjct: 535 DALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLI 594

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             +C+ G +N A ++ + +R  G + P++++YT L+   C  G + +A  + ++ML    
Sbjct: 595 NGFCRNGDLNRAEKVFEEMRSFG-FEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKC 653

Query: 548 CPNFATWNVLVRSLFSNLG 566
            PN AT+N LV  L +N G
Sbjct: 654 IPNDATFNYLVNGLTNNNG 672



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/503 (26%), Positives = 238/503 (47%), Gaps = 29/503 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI    +K + + V  LL +MK  G++ S  +F  +I++  + G   +A      + E G
Sbjct: 278 MINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESG 337

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +  YN +++   ++ +      +  +  R G+ PN F+Y  L+ A  KN     A 
Sbjct: 338 CEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRAS 397

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGL 175
           +LL+EM  +G   D ++Y  +V  +   G+V+ A   R+  M  G     ++YN L++GL
Sbjct: 398 ELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGL 457

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+ +   A  LL EM+D+ + P+    +T++      GN++ +  +      RG + ++
Sbjct: 458 CKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSV 517

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
               +++KGY   G  ++A   + RM      P+   YST+I G      +  A+ +   
Sbjct: 518 VECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGL 577

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M + +C PNV T+++LI+GF + G+L  A +++  M S G  PNVV YT ++   C+   
Sbjct: 578 MLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGK 637

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A    E+M    C PN  TFN  + GL     +  + K  +        PN+T    
Sbjct: 638 LTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQ------PNLT---- 687

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
                          E    +   G    I  YN+IL  +C+  MV  A QL  KM+ +G
Sbjct: 688 --------------LEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKG 733

Query: 476 TKLDAITFNIIIYAYCKQGKVNN 498
              D ++F  +++  C +G++ +
Sbjct: 734 FPPDPVSFIALLHGLCLEGRLQD 756



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/521 (26%), Positives = 243/521 (46%), Gaps = 23/521 (4%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P +  YN ++D           N ++  +K  G  P V TY  ++ A CK  + +  
Sbjct: 232 GCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAV 291

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLG-QVEEARELAMRFGSG----VSVYNALING 174
            KLLVEM  +G A     +  I+ +  K G ++E A  +     SG    ++ YN LING
Sbjct: 292 DKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLING 351

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C + K+ EA  LL   + RG+ PN  +Y+ +I +    G    +  +L +M  RG   +
Sbjct: 352 SCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLD 411

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++ +L+ G ++ G    A  + ++M+  G LP+   Y+ L+ GLC  G    A  +  
Sbjct: 412 LIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLV 471

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M + +  P+    + L+DGF + GNL  A +++   I  G   +VV    M+K  C+  
Sbjct: 472 EMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYG 531

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M + A    ++M      P+  T++T I G      +  A+++   M +  C PN+ T+ 
Sbjct: 532 MMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFT 591

Query: 415 ELLDGLLR---VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            L++G  R   +NR ++ FE   E+   G + N+VTY  ++   C+ G + +A     +M
Sbjct: 592 SLINGFCRNGDLNRAEKVFE---EMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQM 648

Query: 472 LIEGTKLDAITFN-----------IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           LI     +  TFN           I I +     + N  ++    +   G W+  I +Y 
Sbjct: 649 LINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDG-WDWRIAAYN 707

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           S+L  +C    ++ A     KM+++G  P+  ++  L+  L
Sbjct: 708 SILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGL 748



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/291 (21%), Positives = 119/291 (40%), Gaps = 70/291 (24%)

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ-MK 402
           + ++K+L +  +F +  +L+E M  +   P     +  I    G G V  A++L +  + 
Sbjct: 100 SSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVID 159

Query: 403 QYECLPNI--------------------TTYNELLD---------------GLLRVNRVK 427
            + C+P++                      Y+E++D               GL +  +V+
Sbjct: 160 VHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVE 219

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           E   L+ +    G   NIV YNT++ G C+ G +  A  L  ++ ++G      T+  +I
Sbjct: 220 EGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMI 279

Query: 488 YAYCKQGKVNNAIQLL--------------------DRIRGGGE--------W------N 513
            A+CK+GK     +LL                     R + G E        W       
Sbjct: 280 NAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCE 339

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           PD+ +Y +L+ G C+ G ++EA   L+  +  G+ PN  ++  L+ +   N
Sbjct: 340 PDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKN 390


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 271/577 (46%), Gaps = 10/577 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSC---SEGVFISVINSYRRVGLAEQALKMFYRIR 57
           ++  L      D V   L+ M + G +    +     +++ +Y   G+  +A +M  R R
Sbjct: 156 LLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQRAR 215

Query: 58  EF-GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           E  G  P     N +L  L+   R+     +Y  M  +    + ++  ++++ LC    V
Sbjct: 216 EHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLV 275

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNAL 171
           +   KL+      GC P+AV Y  ++   C+ G V     L     A      V  Y  L
Sbjct: 276 EKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTL 335

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++ L ++  +E+   LL EM +R + PNV  Y+++I +LC   +   +L +L QMF  GC
Sbjct: 336 MSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGC 395

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
           +P+  +F++L+ G    GR  EA  L     R    PN+ +Y++LIHG C  G +  A +
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASN 455

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           +  +M E    P+V T+ ALI G   AG +  A  +  +M +    P+   Y  ++  LC
Sbjct: 456 LLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLC 515

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +  M   A +LIE+M  +N  P+   + T I G      +D A K+ + M+Q    P++ 
Sbjct: 516 KKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVV 575

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            YN ++ G  +   + EA E ++ + K G   +  TY T++ G  + G +  A  LL  M
Sbjct: 576 GYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDM 635

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           +    + + + ++ +I  YCK G  + A  L   +   G + P++I+YT L+  +     
Sbjct: 636 MKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLF-PNVITYTILIGSLFKKDK 694

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           +  A +Y + ML     PN  T + LV  L +++  +
Sbjct: 695 VVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASI 731



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/511 (29%), Positives = 247/511 (48%), Gaps = 30/511 (5%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  PN   YN+L+   C+   V     LL EM  KG  P  V+Y T++S + + G +E+ 
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKI 348

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L       R    V +YN++I+ LCK     +A  +L +M   G DP+ IT+ST+IS 
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISG 408

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G V+ +  +L +      NPN+ S+TSL+ G+ + G    AS+L   M+  G  P+
Sbjct: 409 LCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPD 468

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV +  LIHGL   G + EA+ V  +M      P+   Y+ LI G  K   L  A  +  
Sbjct: 469 VVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIE 528

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M+     P+   YT ++    +N    +A  + E M  +   P+ V +N  IKG C  G
Sbjct: 529 EMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFG 588

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            ++ A++ +  M++   +P+  TY  L+ G  +   +  A  L+ ++ K   Q N+V Y+
Sbjct: 589 MMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYS 648

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           ++++G C+ G    A  L G M  +G   + IT+ I+I +  K+ KV  A    + +   
Sbjct: 649 SLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYML-L 707

Query: 510 GEWNPDIISYTSLLWGICNS------------------GGMQEAFIYLQKMLNEGICPNF 551
            + +P+  +  SL+ G+CNS                  G + + F   + ++N+   P  
Sbjct: 708 NQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIF---RALVNDRCDPRN 764

Query: 552 ATWNVLVRSL-FSNLGHLGPVYILDDIMANK 581
           + +N ++ SL   N+  LG    L + MANK
Sbjct: 765 SAYNAIIFSLCIHNM--LGEALDLKNKMANK 793



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/535 (28%), Positives = 250/535 (46%), Gaps = 29/535 (5%)

Query: 25  GVSC-SEGVFISV-INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFS 82
           G  C    VF +V I+ Y R G   + + +   +   GL PTV  Y  ++  L  +    
Sbjct: 287 GAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLE 346

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
            I  + S M+   + PNV  YN ++ ALCK      A  +L +M   GC PDA++++T++
Sbjct: 347 KIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLI 406

Query: 143 SSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           S +C+ G+V+EA  L            +S Y +LI+G C   ++  A  LL EM++RG  
Sbjct: 407 SGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHT 466

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+V+T+  +I  L   G V  +L +  +M  R   P+ + +  L+ G         A +L
Sbjct: 467 PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNL 526

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              M+ +   P+   Y+TLI G   N S+DEA  +   ME+    P+V  Y+A+I G+ +
Sbjct: 527 IEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQ 586

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G +  A +  + M   G  P+   YT ++    +      A SL+  M    C PN V 
Sbjct: 587 FGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVA 646

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA---FELVT 434
           +++ I G C  G  D A  L   M+     PN+ TY  L+  L + ++V  A   FE + 
Sbjct: 647 YSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYML 706

Query: 435 EIEKCGIQLNIVTYNTILHGVCR--AGMVVEAFQLLGKMLIEGTKLDAI----------- 481
            + +C    N  T ++++ G+C   A ++         +  +G  LD             
Sbjct: 707 -LNQCSP--NDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPR 763

Query: 482 --TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
              +N II++ C    +  A+ L +++   G + PD  ++ SLL+G C+ G  +E
Sbjct: 764 NSAYNAIIFSLCIHNMLGEALDLKNKMANKG-YKPDSATFLSLLYGFCSVGKSRE 817



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 240/496 (48%), Gaps = 25/496 (5%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG K +++ +  LL +M+   +  +  ++ SVI++  +   A QAL +  ++   G  P 
Sbjct: 339 LGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPD 398

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
              ++ ++  L  E R      +     R  + PN+ +Y  L+   C    V  A  LLV
Sbjct: 399 AITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLV 458

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RE--LAMRFGSGVSVYNALINGLCKEH 179
           EM  +G  PD V++  ++  +   GQV EA   RE   A +     ++YN LI+GLCK+ 
Sbjct: 459 EMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKK 518

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            +  A  L+ EM+++ + P+   Y+T+I       +++ +  I   M  +G +P++  + 
Sbjct: 519 MLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN 578

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +++KGY   G  +EA +  + M + G +P+   Y+TLI G    G++  A+S+   M + 
Sbjct: 579 AMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKR 638

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C PNV  YS+LI+G+ K G+   A  ++  M S G  PNV+ YT ++  L + +   +A
Sbjct: 639 RCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRA 698

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
               E M    C PN  T ++ + GLC           +  +    C   +  + +    
Sbjct: 699 AMYFEYMLLNQCSPNDYTLHSLVTGLCNS---------MASIISSHCSSTVNLHGK--GA 747

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           LL + R      LV   ++C  + +   YN I+  +C   M+ EA  L  KM  +G K D
Sbjct: 748 LLDIFRA-----LVN--DRCDPRNS--AYNAIIFSLCIHNMLGEALDLKNKMANKGYKPD 798

Query: 480 AITFNIIIYAYCKQGK 495
           + TF  ++Y +C  GK
Sbjct: 799 SATFLSLLYGFCSVGK 814



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 223/501 (44%), Gaps = 12/501 (2%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           ++ +L  L    RF  ++    +M   G    V T    L AL       G      EM 
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPT-RACLGALVATYADAGMEAKAAEMC 211

Query: 128 NK-----GCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSVYNA--LINGLCK 177
            +     G  P A     ++  + +  + ++AR+L    +   SG   Y+   ++ GLC 
Sbjct: 212 QRAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCL 271

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           E  +E+   L+      G  PN + Y+ +I   C  G+V   + +LG+M  +G  P + +
Sbjct: 272 EGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVT 331

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +L+      G   + + L + M      PNV  Y+++I  LC   S  +A+ V  QM 
Sbjct: 332 YGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMF 391

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C P+  T+S LI G  + G +  A ++         +PN+ +YT ++   C      
Sbjct: 392 AGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVI 451

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A +L+ +M      P+ VTF   I GL   G+V  A+ + ++M   + LP+   YN L+
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLI 511

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
            GL +   +  A  L+ E+ +  +  +   Y T++ G  R   + EA ++   M  +G  
Sbjct: 512 SGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIH 571

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D + +N +I  YC+ G +N A++ +  +R  G   PD  +YT+L+ G    G +  A  
Sbjct: 572 PDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRI-PDEFTYTTLIGGYAKQGNISGALS 630

Query: 538 YLQKMLNEGICPNFATWNVLV 558
            L  M+     PN   ++ L+
Sbjct: 631 LLCDMMKRRCQPNVVAYSSLI 651



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 195/439 (44%), Gaps = 22/439 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++  +   + LL++     ++ +   + S+I+ +   G    A  +   + E G
Sbjct: 405 LISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERG 464

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  +  ++  L+   + S    +   M    + P+   YN+L+  LCK   +  A 
Sbjct: 465 HTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAAR 524

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            L+ EM  +   PD   YTT++    +   ++EAR++            V  YNA+I G 
Sbjct: 525 NLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGY 584

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   + EA   +  M   G  P+  TY+T+I      GN+  +L +L  M  R C PN+
Sbjct: 585 CQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNV 644

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++SL+ GY   G T  A  L+  M  +G  PNV+ Y+ LI  L     +  A      
Sbjct: 645 VAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEY 704

Query: 296 MEENSCPPNVTTYSALIDGF------------AKAGNLLGAS---QIWNRMISNGCSPNV 340
           M  N C PN  T  +L+ G             +   NL G      I+  ++++ C P  
Sbjct: 705 MLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRN 764

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV-DWAMKLLD 399
            AY  ++  LC +NM  +A  L  KMA +   P++ TF + + G C  G+  +W   L +
Sbjct: 765 SAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPN 824

Query: 400 QMKQYECLPNITTYNELLD 418
           + ++ E L   + Y  L D
Sbjct: 825 EFQRDE-LEVASRYKILFD 842


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 203/403 (50%), Gaps = 1/403 (0%)

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           + +  G   YN L+  L K  + +  +    +M+  G  PN  TY  ++ SLC     E 
Sbjct: 11  VHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  +   M  +GC+PN+ S++ L+ G   G +  EA++L N MI  G  PNVV Y +L+ 
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G + EAV +  +M    CPP+   Y+ LIDGF+K G++  A +++  M+  GC P
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            V  Y  ++    +   F +  SL + M  + C PN  TFN  + G C  G +  A +L 
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF 250

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M+   C P++ +YN L+ G+    +  EA  L+ E+ + G+  +IV+YN ++ G  ++
Sbjct: 251 LEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G +  A +L  ++   G + DA +++ II   C+ GKV  A  +   +   G   PD   
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA-PDAAV 369

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              L+ G+C    + E+    Q M+     P    +N+L+  L
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKL 412



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 223/426 (52%), Gaps = 14/426 (3%)

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-- 157
             +YN LL+ L K+ R D  Y    +M   GC P+  +Y  ++ S+C+  + EEAR +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 158 ---AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              A      V  Y+ LI GLC+  K++EA  LL EM+D G  PNV+TY +++S LC +G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ ++ +  +M  RGC P+   +  L+ G+   G   EA  L+  M+ +G +P V  Y+
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +L+ G    G      S+   M    C PN+ T++ L+DGF K G+++ A +++  M S 
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GC P+VV+Y  +++ +C     H+A  L+ +M      P+ V++N  I G    G +D A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +KL  ++ +    P+  +Y+ ++D L R  +V  AF +  ++   G   +      ++ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAIT----FNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +CR   + E+ +L   M+    K + +     +N+++Y  CK  + ++  ++   +   G
Sbjct: 377 LCRGERLTESCELFQAMV----KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 511 EWNPDI 516
            ++PD+
Sbjct: 433 -FSPDV 437



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 212/405 (52%), Gaps = 7/405 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P    Y ++L +L    RF     ++  M   G  PNVF+Y+IL+  LC+  +VD A
Sbjct: 47  GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALIN 173
            +LL EM + G  P+ V+Y +++S +CK+G+++EA +L  R         GV VYN LI+
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV-VYNVLID 165

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K+  + EA+ L  EM+++G  P V TY++++S     G       +   M  +GC P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           NI +F +LL G+   G   EA  L+  M   G  P+VV+Y+TL+ G+CS G   EA  + 
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLL 285

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M  +   P++ +Y+ LIDG++K+G L  A +++  +  +G  P+  +Y+ ++  LC+ 
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  + + M      P+       + GLC   R+  + +L   M ++EC+P I  Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           N L+  L +  R  +  E+  E+ + G   ++     IL  + R+
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRS 450



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 208/425 (48%), Gaps = 5/425 (1%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN++L+ L    R   +   Y++M   G  PN +TY  LL++LC+  R + A  +   M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIE 182
            +GC+P+  SY+ +++ +C+  +V+EA EL      G     V  Y +L++GLCK  K++
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  L   MV RG  P+ + Y+ +I      G++  +  +  +M  +GC P + ++ SLL
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+   G       L+  M+R+G +PN+  ++ L+ G C  G M EA  +  +M    CP
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V +Y+ L+ G    G    A ++   MI +G  P++V+Y  ++    ++     A  L
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
             ++      P+  +++T I  LC  G+V  A  +   M      P+      L+ GL R
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R+ E+ EL   + K      I  YN +++ +C+A    +  ++  ++   G   D   
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439

Query: 483 FNIII 487
             +I+
Sbjct: 440 SKVIL 444



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 5/309 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G      V+  +I+ + + G   +A ++F  + E G  PTV  YN +L    
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +  F  +  ++ +M R G  PN+FT+N LL   CK   +  A++L +EM + GC PD V
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEM 191
           SY T++  +C  G+  EA+ L    +R G G  +  YN LI+G  K   ++ A  L  E+
Sbjct: 264 SYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G++P+  +YSTII  LC  G V  +  +   M   G  P+      L+ G   G R 
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E+ +L+  M++   +P +  Y+ L++ LC     D+   + +++ E    P+V     +
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443

Query: 312 IDGFAKAGN 320
           ++   ++ +
Sbjct: 444 LETLRRSDD 452



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y+ L++  AK+G        +N M+  GC PN   Y  +++ LCQ   F +A S+   M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           A + C PN  +++  I GLC   +VD A +LL++M      PN+ TY  LL GL ++ ++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           KEA +L + +   G   + V YN ++ G  + G + EA++L  +ML +G      T+N +
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 487 IYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +  + ++G+      L  D +R G    P+I ++ +LL G C  G M EA     +M + 
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQG--CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 546 GICPNFATWNVLVRSLFSN 564
           G  P+  ++N L+R + S 
Sbjct: 257 GCPPDVVSYNTLMRGMCSK 275



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 5/336 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL +M   G   +   + S+++   ++G  ++A+ +F R+   G  P   +YN
Sbjct: 102 KVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYN 161

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D    +        ++  M   G  P VFTYN LL    +         L  +M  +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+  ++  ++   CK+G + EA  L +   S      V  YN L+ G+C + K  EA
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEA 281

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM+  G+ P++++Y+ +I      G ++ ++ +  ++   G  P+  S+++++  
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+   A  ++  MI  G  P+      L+ GLC    + E+  +   M +  C P 
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           +  Y+ L+    KA       +I++ +   G SP+V
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 5/241 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++     K E   VQ L + M  +G   +   F ++++ + ++G   +A ++F  +R  G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN ++  + ++ +      +   M R G+ P++ +YNIL+    K+  +D A 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           KL  E+   G  PDA SY+TI+  +C+ G+V  A       +A       +V   L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  ++ E+  L   MV     P +  Y+ ++  LC     +    I  ++  RG +P++
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 236 H 236
            
Sbjct: 438 E 438


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 153/629 (24%), Positives = 294/629 (46%), Gaps = 54/629 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG++        LL  ++ +GV      + S+I +Y   G   +A+ +F ++ E G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 61  LKPTVKIYNHILDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            +PT+  YN IL+        +S I  +  +MK  G+ P+++TYN L+ +  + +  + A
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
            ++  EM   G +PD V+Y  ++    K  +  EA E+     A  F   +  YN+LI+ 
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             ++  ++EA  L  +MV +GI P+V TY+T++S     G  + ++ +  +M V GC PN
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +F +L+K +   G   E   ++  +     +P++V ++TL+     NG   E   V  
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK 490

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P   T++ LI  +++ G    A  I+ RM+  G +P++  Y  ++  L +  
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ-------------- 400
           ++ Q+  ++ +M    C PN +T+ + +        V+    L ++              
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610

Query: 401 ---------------------MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
                                +++    P+ITT N ++    R   V +  E++  I+  
Sbjct: 611 TLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS 670

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   ++ TYN++++   R     ++  +L +++ +G K D I+FN +I+AYC+ G++  A
Sbjct: 671 GFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEA 730

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV- 558
            ++   ++  G   PD+I+Y + +    +     EA   ++ M+  G  PN  T+N L+ 
Sbjct: 731 SRIFAEMKDFG-LAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLID 789

Query: 559 -----------RSLFSNLGHLGPVYILDD 576
                       S  SNL +L P    D+
Sbjct: 790 WFCKLNRRDEASSFISNLRNLDPSVTKDE 818



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 256/597 (42%), Gaps = 80/597 (13%)

Query: 47  EQALKMFYRIR---EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           E AL +FY +R   +F    +  +   I+  L  E R S    +  +++ DG+  +++ Y
Sbjct: 164 ELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAY 223

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ--VEEARELAMRF 161
             L+ A   N R   A  +  ++  +GC P  ++Y  I++   K+G    + A  +    
Sbjct: 224 TSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMK 283

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            SGV+     YN LI+   +    EEA  +  EM   G  P+ +TY+ ++          
Sbjct: 284 SSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPR 343

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ +L +M   G  P+I ++ SL+  Y   G   EA +L ++M+++G  P+V  Y+TL+
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            G    G  D A+ V  +M    C PN+ T++ALI      GN +   +++  +    C 
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV 463

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM-- 395
           P++V +  ++ V  QN M  +   + ++M      P   TFNT I     CG  D AM  
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523

Query: 396 ---------------------------------KLLDQMKQYECLPNITTYNELLDG--- 419
                                            K+L +MK   C PN  TY  LL     
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583

Query: 420 ---LLRVNRVKEAF----------------------ELVTEIEKCGIQL-------NIVT 447
              + R++ + E                        +L+TE E+  ++L       +I T
Sbjct: 584 GKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
            N ++    R  MV +  ++L  +   G      T+N ++Y Y +      +  +L  I 
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREII 703

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G   PDIIS+ ++++  C +G M+EA     +M + G+ P+  T+N  + S  S+
Sbjct: 704 AKG-MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASD 759



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/448 (19%), Positives = 198/448 (44%), Gaps = 48/448 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L  QM  +G+      + ++++ + + G  + A+K+F  +R  G +P +  +N 
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNA 436

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMG 127
           ++        F  +  ++  +K     P++ T+N LL    +N   + V G +K   EM 
Sbjct: 437 LIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK---EMK 493

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGV----SVYNALINGLCKEHKIE 182
             G  P+  ++ T++S+  + G  ++A  +  R   +GV    S YNA++  L +    E
Sbjct: 494 RAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWE 553

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV-------------- 228
           ++  +L EM D    PN +TY +++ +  +   VE    +  +++               
Sbjct: 554 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLV 613

Query: 229 ---------------------RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
                                +G +P+I +  +++  Y       + +++ N +   GF 
Sbjct: 614 LVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFT 673

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P++  Y++L++        +++  +  ++      P++ +++ +I  + + G +  AS+I
Sbjct: 674 PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M   G +P+V+ Y   +     ++MF +A  +++ M    C PN  T+N+ I   C 
Sbjct: 734 FAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCK 793

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNE 415
             R D A   +  ++  +  P++T   E
Sbjct: 794 LNRRDEASSFISNLRNLD--PSVTKDEE 819


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 149/503 (29%), Positives = 254/503 (50%), Gaps = 34/503 (6%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +AL +F  + E    P++  +  +L+ +    +F ++  +  +++  G+  +++T N+L+
Sbjct: 55  EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV 167
              C++++   A   L +M   G  PD V++T+                           
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTS--------------------------- 147

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
              LING C  +++EEA  ++ +MV+ GI P+V+ Y+TII SLC  G+V  +L +  QM 
Sbjct: 148 ---LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P++  +TSL+ G    GR  +A  L   M +    P+V+ ++ LI      G   
Sbjct: 205 NYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFL 264

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A  +  +M   S  PN+ TY++LI+GF   G +  A Q++  M + GC P+VVAYT ++
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+      A  +  +M+ +    NT+T+ T I+G    G+ + A ++   M      
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384

Query: 408 PNITTYNELLDGLLRVNRVKEA---FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           PNI TYN LL  L    +VK+A   FE + + E  G+  NI TYN +LHG+C  G + +A
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +   M      +  IT+ III   CK GKV NA+ L   +   G   P++++YT+++ 
Sbjct: 445 LMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG-VKPNVVTYTTMIS 503

Query: 525 GICNSGGMQEAFIYLQKMLNEGI 547
           G+   G   EA +  +KM  +G+
Sbjct: 504 GLFREGLKHEAHVLFRKMKEDGV 526



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 232/452 (51%), Gaps = 9/452 (1%)

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALIN 173
           A  L   M      P  + +T +++ I K+ + +    L      M     +   N L+N
Sbjct: 56  ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
             C+  +   A   L +M+  G +P+++T++++I+  C    +E ++ ++ QM   G  P
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++  +T+++      G  + A  L+++M   G  P+VV Y++L++GLC++G   +A S+ 
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M +    P+V T++ALID F K G  L A +++N MI    +PN+  YT ++   C  
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  +   M  + C P+ V + + I G C C +VD AMK+  +M Q     N  TY
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA---FQLLGK 470
             L+ G  +V +   A E+ + +   G+  NI TYN +LH +C  G V +A   F+ + K
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
             ++G   +  T+N++++  C  GK+  A+ + + +R   E +  II+YT ++ G+C +G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR-KREMDIGIITYTIIIQGMCKAG 474

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++ A      + ++G+ PN  T+  ++  LF
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 185/358 (51%), Gaps = 8/358 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           ++ QM   G+     ++ ++I+S  + G    AL +F ++  +G++P V +Y  +++ L 
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+   + +   M +  ++P+V T+N L+ A  K  +   A +L  EM     AP+  
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF 283

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT++++  C  G V+EAR++     +      V  Y +LING CK  K+++A  +  EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+  N ITY+T+I     VG    +  +   M  RG  PNI ++  LL      G+ 
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKV 403

Query: 252 HEASDLWNRMIR---EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            +A  ++  M +   +G  PN+  Y+ L+HGLC NG +++A+ V   M +      + TY
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           + +I G  KAG +  A  ++  + S G  PNVV YT M+  L +  + H+AH L  KM
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 206/397 (51%), Gaps = 5/397 (1%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L NGL    +  EA  L   MV+    P++I ++ +++ +  +   +  + +   + + G
Sbjct: 44  LRNGL-HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG 102

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            + ++++   L+  +    + + AS    +M++ GF P++V +++LI+G C    M+EA+
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S+  QM E    P+V  Y+ +ID   K G++  A  ++++M + G  P+VV YT +V  L
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C +  +  A SL+  M      P+ +TFN  I      G+   A +L ++M +    PNI
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  L++G      V EA ++   +E  G   ++V Y ++++G C+   V +A ++  +
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M  +G   + IT+  +I  + + GK N A ++   +   G   P+I +Y  LL  +C +G
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG-VPPNIRTYNVLLHCLCYNG 401

Query: 531 GMQEA---FIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +++A   F  +QK   +G+ PN  T+NVL+  L  N
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++  +L+  L   + +EA DL+  M+    LP+++ ++ L++ +      D  +++   +
Sbjct: 39  NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +      ++ T + L++ F ++     AS    +M+  G  P++V +T ++   C  N  
Sbjct: 99  QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A S++ +M      P+ V + T I  LC  G V++A+ L DQM+ Y   P++  Y  L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           ++GL    R ++A  L+  + K  I+ +++T+N ++    + G  ++A +L  +M+    
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
             +  T+  +I  +C +G V+ A Q+   +   G + PD+++YTSL+ G C    + +A 
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF-PDVVAYTSLINGFCKCKKVDDAM 337

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
               +M  +G+  N  T+  L++      G +G   +  ++ ++
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQG----FGQVGKPNVAQEVFSH 377


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 203/403 (50%), Gaps = 1/403 (0%)

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           + +  G   YN L+  L K  + +  +    +M+  G  PN  TY  ++ SLC     E 
Sbjct: 11  VHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEE 70

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +  +   M  +GC+PN+ S++ L+ G   G +  EA++L N MI  G  PNVV Y +L+ 
Sbjct: 71  ARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLS 130

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC  G + EAV +  +M    CPP+   Y+ LIDGF+K G++  A +++  M+  GC P
Sbjct: 131 GLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP 190

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            V  Y  ++    +   F +  SL + M  + C PN  TFN  + G C  G +  A +L 
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF 250

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M+   C P++ +YN L+ G+    +  EA  L+ E+ + G+  +IV+YN ++ G  ++
Sbjct: 251 LEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G +  A +L  ++   G + DA +++ II   C+ GKV  A  +   +   G   PD   
Sbjct: 311 GALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA-PDAAV 369

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
              L+ G+C    + E+    Q M+     P    +N+L+  L
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKL 412



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 223/426 (52%), Gaps = 14/426 (3%)

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-- 157
             +YN LL+ L K+ R D  Y    +M   GC P+  +Y  ++ S+C+  + EEAR +  
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 158 ---AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
              A      V  Y+ LI GLC+  K++EA  LL EM+D G  PNV+TY +++S LC +G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ ++ +  +M  RGC P+   +  L+ G+   G   EA  L+  M+ +G +P V  Y+
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +L+ G    G      S+   M    C PN+ T++ L+DGF K G+++ A +++  M S 
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GC P+VV+Y  +++ +C     H+A  L+ +M      P+ V++N  I G    G +D A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +KL  ++ +    P+  +Y+ ++D L R  +V  AF +  ++   G   +      ++ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAIT----FNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +CR   + E+ +L   M+    K + +     +N+++Y  CK  + ++  ++   +   G
Sbjct: 377 LCRGERLTESCELFQAMV----KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 511 EWNPDI 516
            ++PD+
Sbjct: 433 -FSPDV 437



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 212/405 (52%), Gaps = 7/405 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P    Y ++L +L    RF     ++  M   G  PNVF+Y+IL+  LC+  +VD A
Sbjct: 47  GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALIN 173
            +LL EM + G  P+ V+Y +++S +CK+G+++EA +L  R         GV VYN LI+
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGV-VYNVLID 165

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G  K+  + EA+ L  EM+++G  P V TY++++S     G       +   M  +GC P
Sbjct: 166 GFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVP 225

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           NI +F +LL G+   G   EA  L+  M   G  P+VV+Y+TLI G+CS G   EA  + 
Sbjct: 226 NIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLL 285

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M  +   P++ +Y+ LIDG++K+G L  A +++  +  +G  P+  +Y+ ++  LC+ 
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  + + M      P+       + GLC   R+  + +L   M ++EC+P I  Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           N L+  L +  R  +  E+  E+ + G   ++     IL  + R+
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRS 450



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 5/425 (1%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN++L+ L    R   +   Y++M   G  PN +TY  LL++LC+  R + A  +   M 
Sbjct: 20  YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIE 182
            +GC+P+  SY+ +++ +C+  +V+EA EL      G     V  Y +L++GLCK  K++
Sbjct: 80  AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  L   MV RG  P+ + Y+ +I      G++  +  +  +M  +GC P + ++ SLL
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+   G       L+  M+R+G +PN+  ++ L+ G C  G M EA  +  +M    CP
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V +Y+ LI G    G    A ++   MI +G  P++V+Y  ++    ++     A  L
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
             ++      P+  +++T I  LC  G+V  A  +   M      P+      L+ GL R
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R+ E+ EL   + K      I  YN +++ +C+A    +  ++  ++   G   D   
Sbjct: 380 GERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEI 439

Query: 483 FNIII 487
             +I+
Sbjct: 440 SKVIL 444



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 5/309 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M   G      V+  +I+ + + G   +A ++F  + E G  PTV  YN +L    
Sbjct: 144 LFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS 203

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +  F  +  ++ +M R G  PN+FT+N LL   CK   +  A++L +EM + GC PD V
Sbjct: 204 RKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVV 263

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEM 191
           SY T++  +C  G+  EA+ L    +R G G  +  YN LI+G  K   ++ A  L  E+
Sbjct: 264 SYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEI 323

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G++P+  +YSTII  LC  G V  +  +   M   G  P+      L+ G   G R 
Sbjct: 324 PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERL 383

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E+ +L+  M++   +P +  Y+ L++ LC     D+   + +++ E    P+V     +
Sbjct: 384 TESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVI 443

Query: 312 IDGFAKAGN 320
           ++   ++ +
Sbjct: 444 LETLRRSDD 452



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 3/259 (1%)

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y+ L++  AK+G        +N M++ GC PN   Y  +++ LCQ   F +A S+   M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
           A + C PN  +++  I GLC   +VD A +LL++M      PN+ TY  LL GL ++ ++
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           KEA +L + +   G   + V YN ++ G  + G + EA++L  +ML +G      T+N +
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 487 IYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +  + ++G+      L  D +R G    P+I ++ +LL G C  G M EA     +M + 
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQG--CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 546 GICPNFATWNVLVRSLFSN 564
           G  P+  ++N L+R + S 
Sbjct: 257 GCPPDVVSYNTLIRGMCSK 275



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 5/336 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL +M   G   +   + S+++   ++G  ++A+ +F R+   G  P   +YN
Sbjct: 102 KVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYN 161

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D    +        ++  M   G  P VFTYN LL    +         L  +M  +
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+  ++  ++   CK+G + EA  L +   S      V  YN LI G+C + K  EA
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEA 281

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             LL EM+  G+ P++++Y+ +I      G ++ ++ +  ++   G  P+  S+++++  
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+   A  ++  MI  G  P+      L+ GLC    + E+  +   M +  C P 
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           +  Y+ L+    KA       +I++ +   G SP+V
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 114/241 (47%), Gaps = 5/241 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++     K E   VQ L + M  +G   +   F ++++ + ++G   +A ++F  +R  G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN ++  + ++ +      +   M R G+ P++ +YNIL+    K+  +D A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
           KL  E+   G  PDA SY+TI+  +C+ G+V  A       +A       +V   L+ GL
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  ++ E+  L   MV     P +  Y+ ++  LC     +    I  ++  RG +P++
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 236 H 236
            
Sbjct: 438 E 438


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 268/558 (48%), Gaps = 11/558 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF-GLKPTVKIYNHIL 72
           ++ +L+ MK + +  +   F ++I +Y   G  ++AL++F+ +RE     PT    N +L
Sbjct: 114 IELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLL 173

Query: 73  DALLAENRFSMINPIYSNMKR--DGMEPNV--FTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + L+   +  +   +Y  M +  DG    V  +T +I++K LC   +++   +L+     
Sbjct: 174 NGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWG 233

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEE 183
           K C P  V Y  I+   CK G ++ A     EL M+     V  Y ALING CK  + E 
Sbjct: 234 KCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEA 293

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              LL EM  RG++ NV  ++ +I +    G V  +  +L +M   GC P+I ++  ++ 
Sbjct: 294 VDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMIN 353

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
               GGR  EA +L  +    G LPN  +Y+ L+H  C  G   +A  + +++ E     
Sbjct: 354 FSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKS 413

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ +Y A I G   AG +  A  +  +M+  G  P+   Y  ++  LC+         L+
Sbjct: 414 DLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLL 473

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M   N  P+   F T I G    G +D A+K+   + +    P I  YN ++ G  + 
Sbjct: 474 SEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKF 533

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            ++ +A   + E+       +  TY+T++ G  +   +  A ++ G+M+    K + IT+
Sbjct: 534 GKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITY 593

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
             +I  +CK+  +  A ++   ++   +  P++++YT+L+ G   +G  + A    + ML
Sbjct: 594 TSLINGFCKKADMIRAEKVFSGMK-SFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652

Query: 544 NEGICPNFATWNVLVRSL 561
             G  PN AT++ L+  L
Sbjct: 653 MNGCLPNDATFHYLINGL 670



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 252/500 (50%), Gaps = 25/500 (5%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L ++K++GV  +   + ++IN + + G  E   ++   +   GL   VK++N+++D   A
Sbjct: 263 LNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVID---A 319

Query: 78  ENRFSMINPIYSNMKR---DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           E ++ ++      ++R    G  P++ TYNI++   CK  R++ A +LL +   +G  P+
Sbjct: 320 EYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPN 379

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLC 189
             SYT ++ + CK G   +A  +  R       S +  Y A I+G+    +I+ A  +  
Sbjct: 380 KFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVRE 439

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M+++G+ P+   Y+ ++S LC  G +     +L +M  R   P+++ F +L+ G++  G
Sbjct: 440 KMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNG 499

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              EA  ++  +IR+G  P +V Y+ +I G C  G M +A+S   +M      P+  TYS
Sbjct: 500 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYS 559

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            +IDG+ K  ++  A +++ +M+ +   PNV+ YT ++   C+     +A  +   M   
Sbjct: 560 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSF 619

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL-------- 421
           +  PN VT+ T + G    G+ + A  + + M    CLPN  T++ L++GL         
Sbjct: 620 DLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVL 679

Query: 422 ------RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
                 + N      +  T +   G    I  YN+++  +C+ G V  A  LL KML +G
Sbjct: 680 IEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKG 739

Query: 476 TKLDAITFNIIIYAYCKQGK 495
             +D++ F  +++  C +GK
Sbjct: 740 FLIDSVCFTALLHGLCHKGK 759



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 243/519 (46%), Gaps = 22/519 (4%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  YN I+D    +          + +K  G+ P V TY  L+   CK    +   +L
Sbjct: 238 PHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQL 297

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCK 177
           L EM  +G   +   +  ++ +  K G V EA E+  R      G  ++ YN +IN  CK
Sbjct: 298 LTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCK 357

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             +IEEA  LL +  +RG+ PN  +Y+ ++ + C  G+   + G+L ++   G   ++ S
Sbjct: 358 GGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVS 417

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + + + G ++ G    A  +  +M+ +G  P+   Y+ L+ GLC  G +     +  +M 
Sbjct: 418 YGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEML 477

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           + +  P+V  ++ LIDGF + G L  A +I+  +I  G  P +V Y  M+K  C+     
Sbjct: 478 DRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMT 537

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A S + +M   +  P+  T++T I G      +  A+K+  QM +++  PN+ TY  L+
Sbjct: 538 DALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLI 597

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G  +   +  A ++ + ++   +  N+VTY T++ G  +AG    A  +   ML+ G  
Sbjct: 598 NGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCL 657

Query: 478 LDAITFNIIIYAYC-----------KQGKVNNAIQLLD----RIRGGGEWNPDIISYTSL 522
            +  TF+ +I               K  K N    +LD     +  G  W+  I +Y S+
Sbjct: 658 PNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDG--WDQVIAAYNSV 715

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +  +C  G +  A + L KML +G   +   +  L+  L
Sbjct: 716 IVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGL 754



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 191/402 (47%), Gaps = 6/402 (1%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +++L+  L       E   +L  M  + + P    +S +I +  + G+++ +L +   + 
Sbjct: 98  HSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVR 157

Query: 228 -VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE----GFLPNVVAYSTLIHGLCS 282
            +  C P   +   LL G +  G+   A  L+++M++     G + +    S ++ GLC+
Sbjct: 158 EMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCN 217

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G ++E   +        C P+V  Y+ +IDG+ K G+L  A++  N +   G  P V  
Sbjct: 218 LGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVET 277

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+   F     L+ +MA      N   FN  I      G V  A ++L +M 
Sbjct: 278 YGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMA 337

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +  C P+ITTYN +++   +  R++EA EL+ + ++ G+  N  +Y  ++H  C+ G  V
Sbjct: 338 EMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYV 397

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A  +L ++   G K D +++   I+     G+++ A+ + +++   G + PD   Y  L
Sbjct: 398 KASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVF-PDAQIYNIL 456

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           + G+C  G +    + L +ML+  + P+   +  L+     N
Sbjct: 457 MSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRN 498



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 148/354 (41%), Gaps = 54/354 (15%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +K  I  ++ LL +M    V     VF ++I+ + R G  ++A+K+F  I   G
Sbjct: 456 LMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKG 515

Query: 61  LKPTVKIYNH-----------------------------------ILDALLAENRFSMIN 85
           + P +  YN                                    ++D  + ++  S   
Sbjct: 516 VDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSAL 575

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            ++  M +   +PNV TY  L+   CK   +  A K+   M +    P+ V+YTT+V   
Sbjct: 576 KMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGF 635

Query: 146 CKLGQVEEAR---ELAMRFG--SGVSVYNALINGLC-----------KEHKIEEAFWLL- 188
            K G+ E A    EL +  G     + ++ LINGL            K+ K  E   +L 
Sbjct: 636 FKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILD 695

Query: 189 --CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
               M+  G D  +  Y+++I  LC  G V+T+  +L +M  +G   +   FT+LL G  
Sbjct: 696 FFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLC 755

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
             G++ E  ++ +  + +  L   V YS  +      G + EA  +   + E+S
Sbjct: 756 HKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLVEDS 809


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 279/541 (51%), Gaps = 9/541 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL---AENRFSMIN 85
           S+ +  + I +Y ++     A ++F +++    +P +   N ++++L+   + +   +  
Sbjct: 139 SKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLAR 198

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +  +  + G+ PN  ++NIL+   C  ++V  A   + +M   GC PD VSY TI+ ++
Sbjct: 199 QVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDAL 258

Query: 146 CKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            K   ++EAR+L +   S G+S     YN L+ G C+   ++EA  ++  M    + P V
Sbjct: 259 LKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTV 318

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            TY+ +++  C+ G ++ +  I  +M      P++ ++ +L+ G      + E   L   
Sbjct: 319 WTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEE 378

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M ++G   N V Y+ ++  +C  G+M EA +   +MEEN   P+  TY+ LI  + KAG 
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A ++ + M S G   +      ++  LC      +A++L+   +      + V++  
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G     + D A+ L D+MK+ + +P+  TYN ++ GL +  +V +A + + E+ + G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  +  TYN I+HG C  G V +AFQ   +M+    K D  T NI++   C++G +  A+
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L + +   G+ + D+++Y +++  +C  G  + A+  L +M  + + P+  T+ V++ +
Sbjct: 619 KLFNTLVSKGK-DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677

Query: 561 L 561
           L
Sbjct: 678 L 678



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 251/564 (44%), Gaps = 27/564 (4%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           GV  +   F  +I  Y      + AL    ++ EFG  P    YN ILDALL        
Sbjct: 208 GVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEA 267

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +  +MK  G+ PN  TYN+L+   C+   +  A K++  M      P   +Y  +V+ 
Sbjct: 268 RDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNG 327

Query: 145 ICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
            C  G+++EA  +      M     V  YN LI+G  +     E + L+ EM  +G+  N
Sbjct: 328 FCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCN 387

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            +TY+ I+  +C  GN+  +   L +M   G +P+  ++ +L+  Y   G+  +A  + +
Sbjct: 388 AVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMD 447

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  +G   +    +T++H LC    +DEA ++     +     +  +Y  LI G+ K  
Sbjct: 448 EMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDE 507

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
               A  +W+ M      P+ + Y  ++  LCQ+    QA   + +M      P+  T+N
Sbjct: 508 KGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I G C  G V+ A +  ++M +    P++ T N LL GL R   +++A +L   +   
Sbjct: 568 IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK 627

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G  +++VTYNTI+  +C+ G    A+ LL +M  +    D  T+ +II A    G++  A
Sbjct: 628 GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEA 687

Query: 500 IQLLDRIRGGG----------------------EWNPDIISYTSLLWGICNSGGMQEAFI 537
            +   ++   G                       ++   I+Y+  +  +CN    ++A  
Sbjct: 688 EEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMH 747

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
              ++  EG+  N  T+  L+  L
Sbjct: 748 LFVEVTKEGVALNKYTYLNLMEGL 771



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 236/497 (47%), Gaps = 32/497 (6%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  MK +G+S ++  +  ++  Y R+GL ++A K+   +    L PTV  YN +++   
Sbjct: 270 LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC 329

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      I   M++  + P+V TYN L+    +       Y L+ EM  KG   +AV
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAV 389

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  I+  +CK G + EA     +   +G+S     YN LI   CK  K+ +AF ++ EM
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM 449

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G+  +  T +TI+  LC    ++ +  +L     RG   +  S+  L+ GY    + 
Sbjct: 450 TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKG 509

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +LW+ M     +P+ + Y+++I GLC +  +D+A+    +M EN   P+ TTY+ +
Sbjct: 510 DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNII 569

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC--MVKVLCQNNMFHQAHSLIEKMAFE 369
           I GF   GN+  A Q  N MI N   P+V  YTC  +++ LC+  M  +A  L   +  +
Sbjct: 570 IHGFCLEGNVEKAFQFHNEMIENLFKPDV--YTCNILLRGLCREGMLEKALKLFNTLVSK 627

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               + VT+NT I  LC  G+ + A  LL +M+  +  P+  TY  ++  L    R+KEA
Sbjct: 628 GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEA 687

Query: 430 FELVTEIEKCGI-----------------------QLNIVTYNTILHGVCRAGMVVEAFQ 466
            E   ++ + GI                           + Y+  ++ +C      +A  
Sbjct: 688 EEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMH 747

Query: 467 LLGKMLIEGTKLDAITF 483
           L  ++  EG  L+  T+
Sbjct: 748 LFVEVTKEGVALNKYTY 764



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 176/371 (47%), Gaps = 4/371 (1%)

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG---YLLGGRTHE 253
           +P+     T I +   +     +  I  +M      PN+ +  +L+     Y        
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  +    I+ G +PN  +++ LI+G C    + +A+    +M E  C P+  +Y+ ++D
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
              K   L  A  +   M S G SPN   Y  +V   C+  +  +A  +IE M   N  P
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
              T+N  + G C  G++D A ++ D+M++   LP++ TYN L+DG  +     E + L+
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E++K G++ N VTYN IL  +C+ G + EA   L KM   G   D +T+N +I AYCK 
Sbjct: 377 EEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKA 436

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
           GK+  A +++D +   G    D  +  ++L  +C    + EA+  L      G   +  +
Sbjct: 437 GKMGKAFRMMDEMTSKG-LKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVS 495

Query: 554 WNVLVRSLFSN 564
           + +L+   F +
Sbjct: 496 YGILILGYFKD 506



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 186/417 (44%), Gaps = 17/417 (4%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L+++M  +GV C+   +  ++    + G   +A     ++ E GL P    YN ++ 
Sbjct: 372 VYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIG 431

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           A     +      +   M   G++ + +T N +L  LC   ++D AY LL     +G   
Sbjct: 432 AYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYIL 491

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D VSY  ++    K  + + A  L       +       YN++I GLC+  K+++A   L
Sbjct: 492 DEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKL 551

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM++ G+ P+  TY+ II   C  GNVE +     +M      P++++   LL+G    
Sbjct: 552 NEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCRE 611

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A  L+N ++ +G   +VV Y+T+I  LC  G  + A  +  +ME     P+  TY
Sbjct: 612 GMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTY 671

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             +I     AG +  A +   +M+ +G             V  QN    +  +++     
Sbjct: 672 KVIIAALTDAGRIKEAEEFTLKMVESGI------------VHDQNLKLGKGQNVLTSEVS 719

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           E+    ++ ++  I  LC   +   AM L  ++ +     N  TY  L++GL++  +
Sbjct: 720 EHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 17/313 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D    LL      G    E  +  +I  Y +    ++AL ++  ++E  + P+   YN
Sbjct: 473 KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYN 532

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L    +        + M  +G+ P+  TYNI++   C    V+ A++   EM   
Sbjct: 533 SVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN 592

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
              PD  +   ++  +C+ G +E+A +L     S      V  YN +I+ LCKE K E A
Sbjct: 593 LFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENA 652

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           + LL EM  + + P+  TY  II++L D G ++ +     +M   G    +H      + 
Sbjct: 653 YDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI---VHD-----QN 704

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
             LG    +  ++    + E F    +AYS  I+ LC+     +A+ +  ++ +     N
Sbjct: 705 LKLG----KGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALN 760

Query: 305 VTTYSALIDGFAK 317
             TY  L++G  K
Sbjct: 761 KYTYLNLMEGLIK 773



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 39/240 (16%)

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           H+ H LI     +   P+    +T I       +   A ++ ++MK+    PN+ T N L
Sbjct: 122 HELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTL 181

Query: 417 LDGLLRV--------------------------------------NRVKEAFELVTEIEK 438
           ++ L+R                                       ++VK+A + V ++ +
Sbjct: 182 MNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSE 241

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G   + V+YNTIL  + +  ++ EA  LL  M  +G   +  T+N+++  YC+ G +  
Sbjct: 242 FGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKE 301

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A ++++ I       P + +Y  L+ G CN G + EAF    +M    + P+  T+N L+
Sbjct: 302 ATKVIE-IMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLI 360


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 234/434 (53%), Gaps = 5/434 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + +L +F+ + +    P++  ++ +L A+    ++ ++  ++  M+  G+  N+ T NIL
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           L   C+ +++  A   L +M   G  PD V++ ++++  C+  ++ +A     R + M +
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V +YN +I+GLCK  +++ A  LL  M   GI P+ +TY+++IS LC+ G  + +  
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++  M  R   P++ +F +L+   +  GR  EA +L+  MIR    P++V YS LI+GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +DEA  +   M    C P+V TYS LI+G+ K+  +    +++  M   G   N V
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT +++  C+    + A  + + M F   PPN +T+N  + GLC  G+++ A+ +L  M
Sbjct: 363 TYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           ++     +I TYN ++ G+ +   V +A++L   +   G+  +I TY  ++ G+ + G+ 
Sbjct: 423 QKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLR 482

Query: 462 VEAFQLLGKMLIEG 475
            EA  L  KM  +G
Sbjct: 483 GEADALFRKMKEDG 496



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 227/453 (50%), Gaps = 6/453 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           Y  +L+   +  ++D +  L   M      P    ++ ++S+I K+ + +    L     
Sbjct: 49  YREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +     +   N L+N  C+  ++  A   L +M+  G +P+++T+ ++++  C    + 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIY 168

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  +M   G  PN+  + +++ G     +   A DL NRM  +G  P+ V Y++LI
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLI 228

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLC++G  D+A  +   M +    P+V T++ALID   K G +  A +++  MI     
Sbjct: 229 SGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD 288

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P++V Y+ ++  LC  +   +A  +   M  + C P+ VT++  I G C   +V+  MKL
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M Q   + N  TY  L+ G  R  ++  A E+   +  CG+  NI+TYN +LHG+C 
Sbjct: 349 FCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCD 408

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + +A  +L  M   G   D +T+NIII   CK G+V +A  L   +   G   PDI 
Sbjct: 409 NGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG-LTPDIW 467

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           +YT+++ G+   G   EA    +KM  +GI PN
Sbjct: 468 TYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 215/400 (53%), Gaps = 1/400 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           ++ ++ L++ + K  K +   +L  +M   GI  N+ T + +++  C    +  +L  LG
Sbjct: 81  IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M   G  P+I +F SLL G+  G R ++A  +++RM+  G+ PNVV Y+T+I GLC + 
Sbjct: 141 KMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSK 200

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A+ +  +ME +   P+  TY++LI G   +G    A+++ + M      P+V  + 
Sbjct: 201 QVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFN 260

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++    +     +A  L E+M   +  P+ VT++  I GLC   R+D A ++   M   
Sbjct: 261 ALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK 320

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C P++ TY+ L++G  +  +V+   +L  E+ + G+  N VTY  ++ G CRAG +  A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVA 380

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            ++   M+  G   + IT+N++++  C  GK+  A+ +L  ++  G  + DI++Y  ++ 
Sbjct: 381 EEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSG-MDADIVTYNIIIR 439

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G+C +G + +A+     +  +G+ P+  T+  ++  L+  
Sbjct: 440 GMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK 479



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 183/348 (52%), Gaps = 5/348 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F S++N + R      AL MF R+ E G +P V IYN I+D L    +      + + M
Sbjct: 153 TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + DG+ P+  TYN L+  LC + R D A +++  M  +   PD  ++  ++ +  K G++
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRI 272

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA EL            +  Y+ LI GLC   +++EA  +   MV +G  P+V+TYS +
Sbjct: 273 SEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSIL 332

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C    VE  + +  +M  RG   N  ++T L++GY   G+ + A +++  M+  G 
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV 392

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN++ Y+ L+HGLC NG +++A+ +   M+++    ++ TY+ +I G  KAG +  A  
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           ++  +   G +P++  YT M+  L +  +  +A +L  KM  +   PN
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 5/403 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V YL +QM++ G+  +      ++N + R      AL    ++ + G +P +  +  +
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L+     +R      ++  M   G EPNV  YN ++  LCK+ +VD A  LL  M   G 
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217

Query: 132 APDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFW 186
            PDAV+Y +++S +C  G+ ++A  +            V  +NALI+   KE +I EA  
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEE 277

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  EM+ R +DP+++TYS +I  LC    ++ +  + G M  +GC P++ +++ L+ GY 
Sbjct: 278 LYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYC 337

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
              +      L+  M + G + N V Y+ LI G C  G ++ A  +   M     PPN+ 
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNII 397

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ L+ G    G +  A  I   M  +G   ++V Y  +++ +C+      A  L   +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL 457

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
             +   P+  T+   + GL   G    A  L  +MK+   LPN
Sbjct: 458 NLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 206/417 (49%), Gaps = 5/417 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++++  ++   +  + ++ +++  G+   +   N +L+     ++ S+       M 
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMM 143

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP++ T+  LL   C+ +R+  A  +   M   G  P+ V Y TI+  +CK  QV+
Sbjct: 144 KLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVD 203

Query: 153 EARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L  R    G+      YN+LI+GLC   + ++A  ++  M  R I P+V T++ +I
Sbjct: 204 NALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALI 263

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +    G +  +  +  +M  R  +P+I +++ L+ G  +  R  EA  ++  M+ +G  
Sbjct: 264 DACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCF 323

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+VV YS LI+G C +  ++  + +  +M +     N  TY+ LI G+ +AG L  A +I
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEI 383

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M+  G  PN++ Y  ++  LC N    +A  ++  M       + VT+N  I+G+C 
Sbjct: 384 FKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCK 443

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            G V  A  L   +      P+I TY  ++ GL +     EA  L  ++++ GI  N
Sbjct: 444 AGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 176/332 (53%), Gaps = 1/332 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F+ LL       +      LW +M   G   N+   + L++  C    +  A+S 
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P++ T+ +L++GF +   +  A  +++RM+  G  PNVV Y  ++  LC+
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +     A  L+ +M  +   P+ VT+N+ I GLC  GR D A +++  M + E  P++ T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +N L+D  ++  R+ EA EL  E+ +  +  +IVTY+ +++G+C    + EA Q+ G M+
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +T++I+I  YCK  KV + ++L   +   G    + ++YT L+ G C +G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYTVLIQGYCRAGKL 377

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             A    + M+  G+ PN  T+NVL+  L  N
Sbjct: 378 NVAEEIFKWMVFCGVPPNIITYNVLLHGLCDN 409



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 205/405 (50%), Gaps = 1/405 (0%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            + R  SG S Y  ++    +  K++++  L   MV     P++  +S ++S++  +   
Sbjct: 38  FSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +  + +  QM + G   N+ +   LL  +    +   A     +M++ G  P++V + +L
Sbjct: 98  DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSL 157

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++G C    + +A+ +  +M E    PNV  Y+ +IDG  K+  +  A  + NRM  +G 
Sbjct: 158 LNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGI 217

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+ V Y  ++  LC +  +  A  ++  M      P+  TFN  I      GR+  A +
Sbjct: 218 RPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEE 277

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L ++M +    P+I TY+ L+ GL   +R+ EA ++   +   G   ++VTY+ +++G C
Sbjct: 278 LYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYC 337

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           ++  V    +L  +M   G   + +T+ ++I  YC+ GK+N A ++   +   G   P+I
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV-PPNI 396

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I+Y  LL G+C++G +++A + L  M   G+  +  T+N+++R +
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGM 441



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 161/309 (52%), Gaps = 5/309 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D    LL +M+V+G+      + S+I+     G  + A +M   + +  
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKRE 251

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++DA + E R S    +Y  M R  ++P++ TY++L+  LC  +R+D A 
Sbjct: 252 IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           ++   M +KGC PD V+Y+ +++  CK  +VE   +L               Y  LI G 
Sbjct: 312 QMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGY 371

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  +   MV  G+ PN+ITY+ ++  LCD G +E +L IL  M   G + +I
Sbjct: 372 CRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADI 431

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  +++G    G   +A DL+  +  +G  P++  Y+ ++ GL   G   EA ++  +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRK 491

Query: 296 MEENSCPPN 304
           M+E+   PN
Sbjct: 492 MKEDGILPN 500


>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 281/586 (47%), Gaps = 43/586 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M + G + +   ++  IN Y + G + +A+K +  ++  G+ P V   N +L +L 
Sbjct: 413 LFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLA 472

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R  M   ++  +K  G+ P+  TY +++K   K +  D A K+  EM    C PD +
Sbjct: 473 KSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVL 532

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +  +++ ++ K G+  EA ++      M        YN L+ GL +E K++E   LL EM
Sbjct: 533 AVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEM 592

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 PN+ITY+T++  LC  G V  +LG+L  M ++GC P++ S+ + L G +   R 
Sbjct: 593 NSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRL 652

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTTYS 309
            EA  ++ +M ++   P+     T++     NG M+EA+     Y ++  S   + +++ 
Sbjct: 653 TEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGS-KADRSSFH 710

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +L++G  K   +  + +    +  +    +    + +++ LC++    +AH L++K    
Sbjct: 711 SLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESL 770

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
                T ++N  I GL     +D A  L  +MK+  C P+  TYN +LD + +  R+++ 
Sbjct: 771 GVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDM 830

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++  E+   G +   VTYNTI+ G+ ++ M+ EA  L  K++ EG      T+  ++  
Sbjct: 831 LKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDG 890

Query: 490 YCKQGKVNNAIQLLD---------------------RIRGGGEW-------------NPD 515
             K GK+ +A  L D                     R+ G  E              NPD
Sbjct: 891 LLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPD 950

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I SYT L+  +C +G + ++  Y +++   G+ P+  T+N+L+  L
Sbjct: 951 IKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGL 996



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 277/572 (48%), Gaps = 9/572 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +   LG +  +      L  MK  G+  +   +  +I    + G   +A++++  +   G
Sbjct: 153 IFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDG 212

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P+V+ Y+ ++ A   +     +  +   M+  G++PNV++Y I ++ L +  R + AY
Sbjct: 213 IVPSVRTYSVLMLAF-GKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAY 271

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGL 175
           K+L +M ++GC PD V+ T ++  +C  G+V +A+++  +  +         Y  L++  
Sbjct: 272 KILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKC 331

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
                      +   M   G + NV+ Y+ ++ +LC VG V+ +  +  QM  +G  P  
Sbjct: 332 GDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQ 391

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           +S+ SL+ G+L   R + A +L+N M   G  PN   Y   I+    +G   +A+     
Sbjct: 392 YSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYEL 451

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+     P+V   +A++   AK+G L  A ++++ + S G  P+ + YT M+K   + + 
Sbjct: 452 MKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASN 511

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  +  +M    C P+ +  N+ I  L   GR + A K+  ++K+    P   TYN 
Sbjct: 512 ADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNT 571

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           LL GL R  +VKE   L+ E+       N++TYNT+L  +C+ G V  A  +L  M ++G
Sbjct: 572 LLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKG 631

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D  ++N  ++   K+ ++  A ++  +++      PD  +  ++L     +G M EA
Sbjct: 632 CMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK--KVLAPDYTTLCTILPSFVKNGLMNEA 689

Query: 536 FIYLQK-MLNEGICPNFATWNVLVRSLFSNLG 566
              L++ +L  G   + ++++ L+  +    G
Sbjct: 690 LHTLKEYILQPGSKADRSSFHSLMEGILKRAG 721



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 269/570 (47%), Gaps = 10/570 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E +     +  +  +   M+ + V  + G F+++  S    G    A      ++E G
Sbjct: 118 MLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAG 177

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++  L+          +Y  M  DG+ P+V TY++L+ A  K + V+   
Sbjct: 178 IVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRD-VETVV 236

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL EM + G  P+  SYT  +  + + G+ EEA ++  +         V     LI  L
Sbjct: 237 WLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQIL 296

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ +A  +  +M      P+ +TY T++    D G+  + + I   M   G N N+
Sbjct: 297 CDAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNV 356

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+++      GR  EASD++++M ++G  P   +Y++LI G      ++ A+ +   
Sbjct: 357 VAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNH 416

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   PN  TY   I+ + K+G  L A + +  M S G  P+VVA   ++  L ++  
Sbjct: 417 MNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGR 476

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  +  ++      P+ +T+   IK        D AMK+  +M +  C+P++   N 
Sbjct: 477 LGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNS 536

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+D L +  R  EA+++  E+++  +     TYNT+L G+ R G V E   LL +M    
Sbjct: 537 LIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNS 596

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + IT+N ++   CK G+VN A+ +L  +   G   PD+ SY + L G+     + EA
Sbjct: 597 YPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKG-CMPDLSSYNTALHGLVKEDRLTEA 655

Query: 536 F-IYLQKMLNEGICPNFATWNVLVRSLFSN 564
           F I+ Q  + + + P++ T   ++ S   N
Sbjct: 656 FRIFCQ--MKKVLAPDYTTLCTILPSFVKN 683



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 141/560 (25%), Positives = 243/560 (43%), Gaps = 68/560 (12%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I++  + G   +A K+F+ ++E  L PT   YN +L  L  E +   +  +   M  +
Sbjct: 536  SLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSN 595

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
               PN+ TYN +L  LCKN  V+ A  +L  M  KGC PD                    
Sbjct: 596  SYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPD-------------------- 635

Query: 155  RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                      +S YN  ++GL KE ++ EAF + C+M  + + P+  T  TI+ S    G
Sbjct: 636  ----------LSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNG 684

Query: 215  NVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLL-------------------------- 247
             +  +L  L +  ++ G   +  SF SL++G L                           
Sbjct: 685  LMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFL 744

Query: 248  ---------GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                       +  EA +L  +    G      +Y+ LI GL     +D A  +  +M+ 
Sbjct: 745  SPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKR 804

Query: 299  NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
              C P+  TY+ ++D   K+  +    ++   M   G     V Y  ++  L ++ M ++
Sbjct: 805  LGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYE 864

Query: 359  AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
            A  L  K+  E   P   T+   + GL   G+++ A  L D+M  Y C PN   YN LL+
Sbjct: 865  AMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLN 924

Query: 419  GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            G       ++  EL   +   GI  +I +Y  ++  +C AG + ++     ++   G + 
Sbjct: 925  GYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEP 984

Query: 479  DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
            D IT+N++I+   + G++  A+ L + +   G   P++ +Y SL+  +   G   EA   
Sbjct: 985  DLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG-IAPNLYTYNSLILYLGKEGKAAEAGKM 1043

Query: 539  LQKMLNEGICPNFATWNVLV 558
             +++L  G  PN  T+N L+
Sbjct: 1044 YEELLKNGWKPNVFTYNALI 1063



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 243/528 (46%), Gaps = 8/528 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG + ++  V +LL++M       +   + +V++   + G    AL M Y +   G
Sbjct: 572  LLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKG 631

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P +  YN  L  L+ E+R +    I+  MK+  + P+  T   +L +  KN  ++ A 
Sbjct: 632  CMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKK-VLAPDYTTLCTILPSFVKNGLMNEAL 690

Query: 121  KLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-----ALING 174
              L E +   G   D  S+ +++  I K   +E++ E A        + +      LI  
Sbjct: 691  HTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRH 750

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            LCK  K  EA  L+ +    G+     +Y+ +I  L D   ++ + G+  +M   GC+P+
Sbjct: 751  LCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPD 810

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
              ++  +L       R  +   +   M  +G+    V Y+T+I GL  +  + EA+ + Y
Sbjct: 811  EFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYY 870

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            ++      P   TY  L+DG  K G +  A  +++ M+  GC PN   Y  ++       
Sbjct: 871  KLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAG 930

Query: 355  MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               +   L + M  +   P+  ++   I  LC  GR++ ++    Q+ +    P++ TYN
Sbjct: 931  NTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYN 990

Query: 415  ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             L+ GL R  R++EA  L  ++EK GI  N+ TYN+++  + + G   EA ++  ++L  
Sbjct: 991  LLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKN 1050

Query: 475  GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            G K +  T+N +I  Y   G  +NA     ++  GG   P+  +Y  L
Sbjct: 1051 GWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG-CPPNSSTYMQL 1097



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/570 (21%), Positives = 270/570 (47%), Gaps = 8/570 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K G+  +   V  +   MK +G + +   + +V+++  +VG  ++A  +F ++++ G
Sbjct: 327 LLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKG 386

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++   L  +R +    ++++M   G  PN +TY + +    K+     A 
Sbjct: 387 IEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAI 446

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGL 175
           K    M +KG  PD V+   ++ S+ K G++  A+ +     S GV      Y  +I   
Sbjct: 447 KRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCC 506

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K    +EA  +  EM++    P+V+  +++I +L   G    +  I  ++     +P  
Sbjct: 507 SKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTD 566

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL G    G+  E   L   M    + PN++ Y+T++  LC NG ++ A+ + Y 
Sbjct: 567 CTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYN 626

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M    C P++++Y+  + G  K   L  A +I+ +M     +P+      ++    +N +
Sbjct: 627 MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQM-KKVLAPDYTTLCTILPSFVKNGL 685

Query: 356 FHQA-HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
            ++A H+L E +       +  +F++ ++G+     ++ +++  + +     L +    +
Sbjct: 686 MNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLS 745

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+  L +  +  EA ELV + E  G+ L   +YN ++ G+    ++  A  L  +M   
Sbjct: 746 PLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRL 805

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D  T+N+I+ A  K  ++ + +++   +   G +    ++Y +++ G+  S  + E
Sbjct: 806 GCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKG-YESTYVTYNTIISGLVKSKMLYE 864

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           A     K+++EG  P   T+  L+  L  +
Sbjct: 865 AMDLYYKLMSEGFSPTPCTYGPLLDGLLKD 894



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 177/376 (47%), Gaps = 30/376 (7%)

Query: 46   AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
            A +A ++  +    G+      YN ++  L+ EN   +   ++S MKR G +P+ FTYN+
Sbjct: 757  ALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNL 816

Query: 106  LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
            +L A+ K+ R++   K+  EM  KG     V+Y TI+S                      
Sbjct: 817  ILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIIS---------------------- 854

Query: 166  SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
                    GL K   + EA  L  +++  G  P   TY  ++  L   G +E +  +  +
Sbjct: 855  --------GLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDE 906

Query: 226  MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
            M   GC PN   +  LL GY L G T +  +L+  M+ +G  P++ +Y+ LI  LC+ G 
Sbjct: 907  MLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGR 966

Query: 286  MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
            +++++S   Q+ E    P++ TY+ LI G  ++G L  A  ++N M  +G +PN+  Y  
Sbjct: 967  LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNS 1026

Query: 346  MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
            ++  L +     +A  + E++      PN  T+N  I G    G  D A     QM    
Sbjct: 1027 LILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG 1086

Query: 406  CLPNITTYNELLDGLL 421
            C PN +TY +L + LL
Sbjct: 1087 CPPNSSTYMQLPNQLL 1102



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 57/110 (51%)

Query: 36   VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            +I+   R G  E+A+ +F  + + G+ P +  YN ++  L  E + +    +Y  + ++G
Sbjct: 992  LIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNG 1051

Query: 96   MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
             +PNVFTYN L+     +   D A+    +M   GC P++ +Y  + + +
Sbjct: 1052 WKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQL 1101



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 34/202 (16%)

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVN-RVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           A++L   + Q   + + T     +  L+R + RV++  ++   +++  ++ N+ T+ TI 
Sbjct: 95  ALQLFKSVAQQPRIVHTTESCNYMLELMRAHGRVRDMAQVFDLMQRQIVKANVGTFLTIF 154

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-- 510
             +   G +  A   L  M   G  L++ T+N +IY   K G    A+++   +   G  
Sbjct: 155 RSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIV 214

Query: 511 ---------------------EW----------NPDIISYTSLLWGICNSGGMQEAFIYL 539
                                 W           P++ SYT  +  +  +G  +EA+  L
Sbjct: 215 PSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKIL 274

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
           QKM +EG  P+  T  VL++ L
Sbjct: 275 QKMEDEGCKPDVVTNTVLIQIL 296


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 218/401 (54%), Gaps = 4/401 (0%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R+   V   N L++ L KE++     ++  EM+ R I PN+IT++T+I+ LC VG +  +
Sbjct: 190 RYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKA 249

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT---HEASDLWNRMIREGFLPNVVAYSTL 276
             ++  M V G  PN+ ++ +L+ GY   GR    ++A  +   M+     PN V ++ L
Sbjct: 250 GDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVL 309

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C + ++  A+ V  +M+     P V TY++L++G    G L  A  + + M+S+  
Sbjct: 310 IDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNL 369

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV+ Y  ++   C+  +  +A  L + +  +   PN +TFNT + G C  G+++ A  
Sbjct: 370 KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFL 429

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L   M +   LPN +TYN L+ G  R  +++E   L+ E++  G++ + VTYN ++   C
Sbjct: 430 LQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWC 489

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
                 +A +L+ +ML +G K   +T+NI++  YC +G +  A+ L  ++   G W  ++
Sbjct: 490 EKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRW-ANV 548

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           ++Y  L+ G C  G +++A   L +ML +G+ PN  T+ ++
Sbjct: 549 VTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 220/421 (52%), Gaps = 8/421 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
            L+ F R  ++  K +V   N +L AL+ EN F  +  +Y  M R  + PN+ T+N ++ 
Sbjct: 179 GLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVIN 238

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRF 161
            LCK  +++ A  ++ +M   G  P+ V+Y T++   CK+G+V +        +E+    
Sbjct: 239 GLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK 298

Query: 162 GSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
            S  SV +N LI+G CK+  +  A  +  EM  +G+ P V+TY+++++ LC+ G +  + 
Sbjct: 299 VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAK 358

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L +M      PN+ ++ +L+ GY       EA +L++ + ++G  PNV+ ++TL+HG 
Sbjct: 359 VLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGY 418

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G M+EA  +   M E    PN +TY+ LI GF + G +     + N M   G   + 
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++   C+     +A  LI++M  +   P+ +T+N  + G C  G +  A+ L  Q
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M++     N+ TYN L+ G  R  ++++A  L+ E+ + G+  N  TY  I   +   G 
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGF 598

Query: 461 V 461
           +
Sbjct: 599 L 599



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 198/367 (53%), Gaps = 10/367 (2%)

Query: 199 NVITYSTIISSLC---DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           +V++ + ++S+L    + G VE    +  +M  R  +PN+ +F +++ G    G+ ++A 
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEF---VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNG---SMDEAVSVSYQMEENSCPPNVTTYSALI 312
           D+ + M   GF PNVV Y+TLI G C  G    M +A ++  +M EN   PN  T++ LI
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLI 310

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DGF K  NL  A +++  M S G  P VV Y  +V  LC     ++A  L+++M   N  
Sbjct: 311 DGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLK 370

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN +T+N  I G C    ++ A +L D + +    PN+ T+N LL G  +  +++EAF L
Sbjct: 371 PNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL 430

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + + G   N  TYN ++ G CR G + E   LL +M   G K D +T+NI+I A+C+
Sbjct: 431 QKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCE 490

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           + +   A +L+D +   G   P  ++Y  LL G C  G ++ A    ++M  EG   N  
Sbjct: 491 KKEPKKAARLIDEMLDKG-LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVV 549

Query: 553 TWNVLVR 559
           T+NVL++
Sbjct: 550 TYNVLIQ 556



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 190/386 (49%), Gaps = 8/386 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ E  GV+++ ++M    +S +   F +VIN   +VG   +A  +   ++ +G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260

Query: 61  LKPTVKIYNHILDALLAENRFSMI---NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             P V  YN ++D      R   +   + I   M  + + PN  T+N+L+   CK+  + 
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR-----ELAMRFGSGVSVYNALI 172
            A K+  EM ++G  P  V+Y ++V+ +C  G++ EA+      L+      V  YNALI
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           NG CK+  +EEA  L   +  +G+ PNVIT++T++   C  G +E +  +   M  +G  
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN  ++  L+ G+   G+  E  +L N M   G   + V Y+ LI   C      +A  +
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P+  TY+ L++G+   GNL  A  +  +M   G   NVV Y  +++  C+
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTF 378
                 A+ L+ +M  +   PN  T+
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTY 586



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 167/323 (51%), Gaps = 5/323 (1%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G   ++     +L++M    VS +   F  +I+ + +      ALK+F  ++  GLKP
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           TV  YN +++ L  E + +    +   M    ++PNV TYN L+   CK   ++ A +L 
Sbjct: 337 TVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELF 396

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKE 178
             +G +G  P+ +++ T++   CK G++EEA       L   F    S YN LI G C+E
Sbjct: 397 DNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCRE 456

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            K+EE   LL EM  RG+  + +TY+ +IS+ C+    + +  ++ +M  +G  P+  ++
Sbjct: 457 GKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTY 516

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             LL GY + G    A +L  +M +EG   NVV Y+ LI G C  G +++A  +  +M E
Sbjct: 517 NILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLE 576

Query: 299 NSCPPNVTTYSALIDGFAKAGNL 321
               PN TTY  + +   + G L
Sbjct: 577 KGLIPNRTTYEIIKEEMMEKGFL 599



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           +   A    Y++   SC P       L+    K     G   ++  MI    SPN++ + 
Sbjct: 182 AFKRAGDYRYKLSVLSCNP-------LLSALVKENEFGGVEFVYKEMIRRKISPNLITFN 234

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK---LLDQM 401
            ++  LC+    ++A  +++ M      PN VT+NT I G C  GRV    K   +L +M
Sbjct: 235 TVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEM 294

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            + +  PN  T+N L+DG  +   +  A ++  E++  G++  +VTYN++++G+C  G +
Sbjct: 295 VENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKL 354

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            EA  LL +ML    K + IT+N +I  YCK+  +  A +L D I   G   P++I++ +
Sbjct: 355 NEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG-LTPNVITFNT 413

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           LL G C  G M+EAF+  + ML +G  PN +T+N L+
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLI 450



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 162/323 (50%), Gaps = 4/323 (1%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  Y+   +T    + + R     +  +V++ + L+  L           V  +M    
Sbjct: 166 LVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRK 225

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM---FH 357
             PN+ T++ +I+G  K G L  A  + + M   G  PNVV Y  ++   C+       +
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A +++++M      PN+VTFN  I G C    +  A+K+ ++M+     P + TYN L+
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +GL    ++ EA  L+ E+    ++ N++TYN +++G C+  ++ EA +L   +  +G  
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + ITFN +++ YCK GK+  A  LL ++     + P+  +Y  L+ G C  G M+E   
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAF-LLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
            L +M   G+  +  T+N+L+ +
Sbjct: 465 LLNEMQCRGVKADTVTYNILISA 487



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 3/172 (1%)

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           ++ + N LL  L++ N       +  E+ +  I  N++T+NT+++G+C+ G + +A  ++
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE--WNPDIISYTSLLWGI 526
             M + G   + +T+N +I  YCK G+V    +    ++   E   +P+ +++  L+ G 
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           C    +  A    ++M ++G+ P   T+N LV  L  N G L    +L D M
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGL-CNEGKLNEAKVLLDEM 364


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/466 (27%), Positives = 247/466 (53%), Gaps = 7/466 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+V   N L++ LC+  R   A +++   G+   A  AV+Y+ +    C++G+++EAR +
Sbjct: 86  PDVALANRLVRDLCRRGRPADAARVVEACGS---AATAVTYSALADGYCRVGRLDEARRV 142

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              M        YN L++ LC   ++ +A  LL  M+ RG  P+V+TY+ ++ + C    
Sbjct: 143 VDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRG 202

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
              ++ ++  M V GC P   ++  ++ G    G    A +L N +   G  PN V Y+T
Sbjct: 203 YRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNT 262

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++ GL + G  ++   +  +M   +CPP+  T S +I    + G    A ++  +M  + 
Sbjct: 263 VLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD 322

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C+ N+V Y  +V  LC+      A  L+  M  + C PN  T+N  +KGLC   R + A 
Sbjct: 323 CTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAE 382

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L+ +M Q +CLP+I T+N ++  L +     +A E+  ++ + G   N VTY++++ G+
Sbjct: 383 DLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGL 442

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            + G + ++ +LL +M  +G   + I ++++     ++ K+  AIQ++ +++  G  +P 
Sbjct: 443 AKTGKMEQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTG-ISPQ 500

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            + Y ++L G+C +G   +A   L  M+++G  P+ +T+++L++ L
Sbjct: 501 AVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGL 546



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 216/417 (51%), Gaps = 8/417 (1%)

Query: 94  DGME--PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           DGM   P+ + YN L+ ALC   +V  A  LL  M  +GCAPD V+Y  ++ + CK    
Sbjct: 144 DGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGY 203

Query: 152 EEARELA--MRFGSGVSV---YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +A EL   MR          YN +++G+C+E  ++ A  LL  +   G  PN + Y+T+
Sbjct: 204 RQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTV 263

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +  L   G  E    ++ +MF   C P+  + + ++      G    A  L  +M +   
Sbjct: 264 LKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDC 323

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             N+V Y+ ++ GLC  G +D A+ +   M+ + C PN+ TY+ L+ G   A     A  
Sbjct: 324 TANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAED 383

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +  +M    C P+++ +  ++  LCQ  +  QA  + ++M  + C PN+VT+++ I+GL 
Sbjct: 384 LMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLA 443

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+++ +++LL++M      P I  Y+ L + L   +++ EA ++V +++  GI    V
Sbjct: 444 KTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAV 502

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            YNTIL G+CR G   +A  +L  M+ +G   D  T++I+I     +G +  A +LL
Sbjct: 503 LYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELL 559



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 219/452 (48%), Gaps = 44/452 (9%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G + +   + ++ + Y RVG  ++A ++   +    + P+   YN ++ AL    +    
Sbjct: 115 GSAATAVTYSALADGYCRVGRLDEARRV---VDGMPVLPSAYAYNPLMHALCVRGQVRDA 171

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
             +  NM   G  P+V TYNILL+A CK      A +L+  M  +GC P  V+Y  I+  
Sbjct: 172 LVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDG 231

Query: 145 ICKLGQVEEARELAMRFGS-----GVSVYNALING------------------------- 174
           +C+ G V+ AREL     S         YN ++ G                         
Sbjct: 232 MCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPS 291

Query: 175 ----------LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
                     LC+E   + A  LL +M       N++TY+ ++S LC+ G+V+ +L +L 
Sbjct: 292 EATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLS 351

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            M   GC PNI ++  L+KG     R  +A DL  +M +   LP+++ ++T+I  LC  G
Sbjct: 352 NMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKG 411

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
              +AV V  QM E  C PN  TYS++I+G AK G +  + ++ N M S G +P  + Y 
Sbjct: 412 LTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-INYH 470

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            + + L + +   +A  ++ K+      P  V +NT + GLC  G+ D A+ +L  M   
Sbjct: 471 LLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSD 530

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            C+P+ +TY+ L+ GL     +KEA EL++ +
Sbjct: 531 GCMPDESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 174/359 (48%), Gaps = 6/359 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  M+VEG + +   +  +++   R G  + A ++   +  +G  P    YN +L  L 
Sbjct: 209 LIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLR 268

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+  +  + + M  +   P+  T ++++ +LC+      A +LL +M    C  + V
Sbjct: 269 TAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIV 328

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +VS +C+ G V+ A  L     +      +  YN L+ GLC   + E+A  L+ +M
Sbjct: 329 TYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKM 388

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 P+++T++TII  LC  G    ++ +  QM  +GC PN  +++S+++G    G+ 
Sbjct: 389 SQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKM 448

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            ++ +L N M  +GF P  + Y  L   L     + EA+ + +++++    P    Y+ +
Sbjct: 449 EQSLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTI 507

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           + G  + G    A  I + M+S+GC P+   Y+ +++ L       +A  L+  ++  +
Sbjct: 508 LLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRD 566



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 157/329 (47%), Gaps = 6/329 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + LL  +   G + +   + +V+   R  G  E   ++   +      P+    +
Sbjct: 237 DVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLS 296

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ +L  E  F     +   M +     N+ TYN ++  LC+   VDGA  LL  M   
Sbjct: 297 VVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTD 356

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           GC P+  +Y  +V  +C   + E+A +L  +         +  +N +I  LC++    +A
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M ++G  PN +TYS++I  L   G +E SL +L +M  +G NP I+ +  L + 
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAEC 475

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  EA  + +++   G  P  V Y+T++ GLC NG  D+A+ +   M  + C P+
Sbjct: 476 LNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPD 535

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMIS 333
            +TYS LI G A  G +  A ++ + + S
Sbjct: 536 ESTYSILIQGLAHEGYMKEARELLSTLSS 564



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 16/308 (5%)

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           S+L+H     G +D A+ V   +E + CPP+V   + L+    + G    A+++     +
Sbjct: 64  SSLVH----RGELDAALRV---VESSLCPPDVALANRLVRDLCRRGRPADAARVVE---A 113

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G +   V Y+ +    C+     +A  +++ M      P+   +N  +  LC  G+V  
Sbjct: 114 CGSAATAVTYSALADGYCRVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCVRGQVRD 170

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ LLD M    C P++ TYN LL+   +    ++A EL+  +   G     VTYN I+ 
Sbjct: 171 ALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMD 230

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+CR G V  A +LL  +   G   + + +N ++      G+  +  +L+  +       
Sbjct: 231 GMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSEN-CP 289

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL-GPVY 572
           P   + + ++  +C  G  Q A   L+KM       N  T+N +V  L    GH+ G +Y
Sbjct: 290 PSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQ-GHVDGALY 348

Query: 573 ILDDIMAN 580
           +L ++  +
Sbjct: 349 LLSNMQTD 356



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 123/265 (46%), Gaps = 39/265 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L E+  +DG  YLL  M+ +G                                   
Sbjct: 333 VVSGLCEQGHVDGALYLLSNMQTDGC---------------------------------- 358

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP +  YN ++  L    R+     + + M +    P++ T+N ++  LC+      A 
Sbjct: 359 -KPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAV 417

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV---YNALINGLC 176
           ++  +M  KGC P++V+Y++++  + K G++E++ EL    GS G +    Y+ L   L 
Sbjct: 418 EVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECLN 477

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +E K+ EA  ++ ++ D GI P  + Y+TI+  LC  G  + ++ IL  M   GC P+  
Sbjct: 478 EEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDES 537

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRM 261
           +++ L++G    G   EA +L + +
Sbjct: 538 TYSILIQGLAHEGYMKEARELLSTL 562


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 218/422 (51%), Gaps = 2/422 (0%)

Query: 91  MKRDGM-EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           M  DG   P+V +YN ++  L K   VD AY    EM ++  +PDAV+Y +I++++ K  
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 150 QVEEARE-LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
            ++ A E L +        YN++++G C   + E+A  +  +M   GI+P+V+TY++++ 
Sbjct: 61  AMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            LC  G    +  I   M  RG  P+I ++ +LL GY   G   E  DL   M++ G   
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQL 180

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +   ++ LI        +DE V V  +M +    PN   Y  +IDG  K G L  A   +
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            +MI  G +PNVV YT ++  LC  + + +A  LI ++  +   PN V FNT +  LC  
Sbjct: 241 EQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKE 300

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           GRV  + KL D +      P++ TY+ L+DG     ++  A +L+T +   G++ + VTY
Sbjct: 301 GRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTY 360

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           +T+++G C+   + +A  L  +M   G   D IT+NII++   +  +   A +L  RI  
Sbjct: 361 STLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITE 420

Query: 509 GG 510
            G
Sbjct: 421 SG 422



 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 219/406 (53%), Gaps = 11/406 (2%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R    V  YN +I+GL KE  +++A+    EM+DR + P+ +TY++II++L     ++ +
Sbjct: 6   RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +L  M +    PN  ++ S++ GY   G++ +A  ++ +M  +G  P+VV Y++L+  
Sbjct: 66  MEVLTVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC NG   EA  +   M +    P++TTY  L+ G+A  G L+    +   M+ NG   +
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
              +  ++    +     +   +  KM  +   PN V + T I GLC  GR+D AM   +
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           QM      PN+  Y  L+  L   ++ ++A EL+ EI   GI  NIV +NTIL  +C+ G
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301

Query: 460 MVVEA---FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            V+E+   F LLG +   G   D IT++ +I  YC  GK++ A++LL  +   G   PD 
Sbjct: 302 RVIESKKLFDLLGHI---GVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG-LKPDS 357

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++Y++L+ G C    M++A    ++M + G+ P+  T+N+++  LF
Sbjct: 358 VTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLF 403



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 216/435 (49%), Gaps = 9/435 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  YN I+D L  E         Y  M    + P+  TYN ++ AL K   +D A ++
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCK 177
           L  M      P+  +Y +I+   C  GQ E+A  +  +  S      V  YN+L++ LCK
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
             K  EA  +   MV RG+ P++ TY T++      G +     +L  M   G   + H 
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           F  L+  Y    +  E   ++++M ++G  PN V Y T+I GLC  G +D+A+    QM 
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +    PNV  Y++LI           A ++   ++  G +PN+V +  ++  LC+     
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           ++  L + +      P+ +T++T I G C  G++D AMKLL  M      P+  TY+ L+
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLI 364

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +G  ++NR+++A  L  E+E  G+  +I+TYN ILHG+ R      A +L  ++   GT+
Sbjct: 365 NGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQ 424

Query: 478 LDAITFNIIIYAYCK 492
           L+  T+NII+  + K
Sbjct: 425 LELSTYNIILMDFAK 439



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 212/435 (48%), Gaps = 9/435 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ ++D       +M    VS     + S+I +  +    ++A+++   +    
Sbjct: 17  IIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVM---- 72

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN I+    +  +      I+  M  DG+EP+V TYN L+  LCKN +   A 
Sbjct: 73  VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEAR 132

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGL 175
           K+   M  +G  PD  +Y T++      G + E  + LA+   +G+     V+N LI   
Sbjct: 133 KIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAY 192

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K+ K++E   +  +M  +G+ PN + Y T+I  LC +G ++ ++    QM  +G  PN+
Sbjct: 193 TKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNV 252

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +TSL+       +  +A +L   ++ +G  PN+V ++T++  LC  G + E+  +   
Sbjct: 253 VVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDL 312

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P+V TYS LIDG+  AG + GA ++   M+S G  P+ V Y+ ++   C+ N 
Sbjct: 313 LGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINR 372

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A +L ++M      P+ +T+N  + GL    R   A +L  ++ +      ++TYN 
Sbjct: 373 MEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNI 432

Query: 416 LLDGLLRVNRVKEAF 430
           +L    + N +   F
Sbjct: 433 ILMDFAKTNSLMMHF 447



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 145/265 (54%), Gaps = 5/265 (1%)

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           ++  CPP+V +Y+ +IDG  K G++  A   ++ M+    SP+ V Y  ++  L +    
Sbjct: 3   DDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAM 62

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  ++  M   NC     T+N+ + G C  G+ + A+ +  +M      P++ TYN L
Sbjct: 63  DRAMEVLTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSL 118

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +D L +  +  EA ++   + K G++ +I TY T+LHG    G +VE   LL  M+  G 
Sbjct: 119 MDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGM 178

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           +LD   FNI+I AY KQ KV+  + +  ++R  G   P+ ++Y +++ G+C  G + +A 
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG-LTPNAVNYRTVIDGLCKLGRLDDAM 237

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
           +  ++M+++G+ PN   +  L+ +L
Sbjct: 238 LNFEQMIDKGLTPNVVVYTSLIHAL 262



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 113/226 (50%), Gaps = 5/226 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D      +QM  +G++ +  V+ S+I++       E+A ++ + I + G
Sbjct: 223 VIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQG 282

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  +N ILD+L  E R      ++  +   G+ P+V TY+ L+   C   ++DGA 
Sbjct: 283 INPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAM 342

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
           KLL  M + G  PD+V+Y+T+++  CK+ ++E+A  L     S      +  YN +++GL
Sbjct: 343 KLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
            +  +   A  L   + + G    + TY+ I+       ++    G
Sbjct: 403 FRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSLMMHFG 448



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 9/175 (5%)

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C P++ +YN ++DGL +   V +A+    E+    +  + VTYN+I+  + +A  +  A
Sbjct: 6   RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            ++L  M++     +  T+N I++ YC  G+   AI +  ++   G   PD+++Y SL+ 
Sbjct: 66  MEVLTVMVMP----NCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG-IEPDVVTYNSLMD 120

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
            +C +G   EA      M+  G+ P+  T+  L+    S     G +  + D++A
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASK----GALVEMHDLLA 171


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 242/463 (52%), Gaps = 10/463 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNV 100
           RV +  +AL +FY+++    +PT   YN ++  L+ E     ++ +Y+ M  +G   P+ 
Sbjct: 172 RVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDT 231

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RE 156
            TY+ L+ A  K NR D A +L  EM   G  P A  YTT++    KLG+VEEA     E
Sbjct: 232 VTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHE 291

Query: 157 LAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           + MR     V  Y  LI GL K  ++E+A+ +   M+  G  P+V+  + +I+ L     
Sbjct: 292 MRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDR 351

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           ++ ++ +  +M +  C PN+ ++ +++K  +       EAS    RM ++G +P+   YS
Sbjct: 352 LKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYS 411

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI G C    +++A+ +  +M+E   PP    Y +LI+   KA     A++++  +  N
Sbjct: 412 ILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKEN 471

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
             S +V  Y  M+K   +   F++A  L  +M    C P+   +N  I G+     +D A
Sbjct: 472 CGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEA 531

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             L   M++  C P+I ++N +L+GL R    K A E+  +++   I+ + V+YNT+L  
Sbjct: 532 FSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGC 591

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + RAG+  EA +L+ +M  +G + D IT++ I+ A    GKV+
Sbjct: 592 LSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAV---GKVD 631



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 228/463 (49%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           ++K L +   V+ A  +  ++  + C P A +Y +++  + + G  E+  EL     S  
Sbjct: 166 IVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEG 225

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+   K ++ + A  L  EM + G+ P    Y+T++     +G VE +
Sbjct: 226 HCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEA 285

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L ++ +M +R C P ++++T L++G    GR  +A  ++  M+++G  P+VV  + LI+ 
Sbjct: 286 LNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINI 345

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG-FAKAGNLLGASQIWNRMISNGCSP 338
           L  +  + EAV +  +M   +C PNV TY+ +I   F        AS    RM  +G  P
Sbjct: 346 LGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVP 405

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R + A +L 
Sbjct: 406 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELF 465

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     ++  Y  ++    +  R  EA  L  E++K G   ++  YN ++ G+ RA
Sbjct: 466 QELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRA 525

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            M+ EAF L   M   G   D  + NII+    + G    A+++  +++      PD +S
Sbjct: 526 DMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSST-IKPDAVS 584

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  +  +G  +EA   +++M ++G   +  T++ ++ ++
Sbjct: 585 YNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAV 627



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 223/475 (46%), Gaps = 10/475 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K+   E +  TY  L++ L +N  V   ++ + +M    CA      + IV  + ++  V
Sbjct: 117 KKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMV 176

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYST 205
            +A  +       +       YN++I  L +E   E+   L  EM   G   P+ +TYS 
Sbjct: 177 NKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSA 236

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS+   +   ++++ +  +M   G  P    +T+L+  Y   G+  EA +L + M    
Sbjct: 237 LISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRR 296

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            +P V  Y+ LI GL  +G +++A  V   M ++ C P+V   + LI+   ++  L  A 
Sbjct: 297 CVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAV 356

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMF-HQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           +++  M    C+PNVV Y  ++K L ++     +A S +E+M  +   P++ T++  I G
Sbjct: 357 ELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDG 416

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQL 443
            C   RV+ A+ LL++M +    P    Y  L++ L +  R + A EL  E+ E CG   
Sbjct: 417 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSS- 475

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++  Y  ++    + G   EA  L  +M   G   D   +N +I    +   ++ A  L 
Sbjct: 476 SVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLF 535

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             +   G  NPDI S+  +L G+  +GG + A     KM +  I P+  ++N ++
Sbjct: 536 RTMEENG-CNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVL 589



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 198/410 (48%), Gaps = 13/410 (3%)

Query: 28  CSEG-------VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           CSEG        + ++I+++ ++   + A+++F  ++E GL+PT KIY  ++       +
Sbjct: 222 CSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGK 281

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 +   M+     P V+TY  L++ L K+ RV+ AY +   M   GC PD V    
Sbjct: 282 VEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNN 341

Query: 141 IVSSICKLGQVEEAREL--AMRF---GSGVSVYNALINGLCKEH-KIEEAFWLLCEMVDR 194
           +++ + +  +++EA EL   MR       V  YN +I  L ++     EA   L  M   
Sbjct: 342 LINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKD 401

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G+ P+  TYS +I   C    VE +L +L +M  +G  P   ++ SL+       R   A
Sbjct: 402 GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAA 461

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
           ++L+  +       +V  Y+ +I      G  +EA+ +  +M++  C P+V  Y+ALI G
Sbjct: 462 NELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITG 521

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             +A  +  A  ++  M  NGC+P++ ++  ++  L +     +A  +  KM      P+
Sbjct: 522 MVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPD 581

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            V++NT +  L   G  + A KL+ +M       ++ TY+ +L+ + +V+
Sbjct: 582 AVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVD 631



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 37/303 (12%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           +  F  +   Y  LI  L  N  + E       M ++ C    +  S ++    +   + 
Sbjct: 118 KRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVN 177

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTF 381
            A  I+ ++    C P    Y  ++ +L Q     + H L  +M  E +C P+TVT++  
Sbjct: 178 KALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSAL 237

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I       R D A++L D+MK+    P    Y  L+    ++ +V+EA  LV E+     
Sbjct: 238 ISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRC 297

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
              + TY  ++ G+ ++G V +A+ +   ML +G K D +              +NN I 
Sbjct: 298 VPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVL-------------MNNLIN 344

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L R                       S  ++EA    ++M      PN  T+N +++SL
Sbjct: 345 ILGR-----------------------SDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSL 381

Query: 562 FSN 564
           F +
Sbjct: 382 FED 384


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/505 (27%), Positives = 251/505 (49%), Gaps = 37/505 (7%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
             A+ +F  + +    P++  +N +L A++   ++ ++  +   M+  G+  +++T+NI+
Sbjct: 67  HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +   C   +V  A  +L +M   G  PD V+                             
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTI---------------------------- 158

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
              +L+NG C+ +++ +A  L+ +MV+ G  P+++ Y+ II SLC    V  +L    ++
Sbjct: 159 --GSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI 216

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             +G  PN+ ++T+L+ G    GR ++A+ L   MI+    PNV+ YS L+     NG +
Sbjct: 217 GRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKV 276

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            EA  +  +M   S  P++ TYS+LI+G      +  A+Q+++ M+S GC P+VV+Y  +
Sbjct: 277 LEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTL 336

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C+         L  KM+      NTVT+NT I+G    G VD A +   QM  +  
Sbjct: 337 INGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGV 396

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I TYN LL GL     +++A  +  +++K  + L+IVTY T++ G+C+ G V +A+ 
Sbjct: 397 SPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWG 456

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L   + ++G K D +T+  ++   C +G  +    L  +++  G    D    + L  G 
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND----SMLCLG- 511

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNF 551
              G +  +   ++KML+ G  P+ 
Sbjct: 512 --DGDITISAELIKKMLSCGYAPSL 534



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 213/394 (54%), Gaps = 1/394 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N L++ + K  K +    L  +M   GI  ++ T++ +I+  C    V  +L +LG+M 
Sbjct: 88  FNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKML 147

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P+  +  SL+ G+    R  +A  L ++M+  G+ P++VAY+ +I  LC    ++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVN 207

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A+    ++      PNV TY+AL++G   +G    A+++   MI    +PNV+ Y+ ++
Sbjct: 208 DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALL 267

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
               +N    +A  + E+M   +  P+ VT+++ I GLC   R+D A ++ D M    C 
Sbjct: 268 DAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCF 327

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ +YN L++G  +  RV++  +L  ++ + G+  N VTYNT++ G  + G V +A + 
Sbjct: 328 PDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEF 387

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
             +M   G   D  T+NI++   C  G +  A+ + + ++   E + DI++YT+++ G+C
Sbjct: 388 FSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKS-EMDLDIVTYTTVIQGMC 446

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +G +++A+     +  +G+ P+  T+  ++  L
Sbjct: 447 KTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGL 480



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 207/433 (47%), Gaps = 30/433 (6%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V  L ++M+V G+      F  VIN +        AL +  ++ + G +P       +
Sbjct: 102 DVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSL 161

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++     NR S    +   M   G  P++  YN ++ +LCK  RV+ A     E+G KG 
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGI 221

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            P+ V+YT +V                              NGLC   +  +A  LL +M
Sbjct: 222 RPNVVTYTALV------------------------------NGLCNSGRWNDAARLLRDM 251

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + R I PNVITYS ++ +    G V  +  I  +M     +P+I +++SL+ G  L  R 
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA+ +++ M+ +G  P+VV+Y+TLI+G C    +++ + +  +M +     N  TY+ L
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTL 371

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF + G++  A + +++M S G SP++  Y  ++  LC N +  +A  + E M     
Sbjct: 372 IQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEM 431

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             + VT+ T I+G+C  G+V+ A  L   +      P+I TY  ++ GL       E   
Sbjct: 432 DLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEA 491

Query: 432 LVTEIEKCGIQLN 444
           L T++++ G+  N
Sbjct: 492 LYTKMKQEGLMKN 504



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 198/387 (51%), Gaps = 18/387 (4%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++N + R      A+ +  ++ E G +P +  YN I+D+L    R +     +  + R 
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRK 219

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ PNV TY  L+  LC + R + A +LL +M  +   P+ ++Y+ ++ +  K G+V EA
Sbjct: 220 GIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEA 279

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +E+      M     +  Y++LINGLC   +I+EA  +   MV +G  P+V++Y+T+I+ 
Sbjct: 280 KEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLING 339

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C    VE  + +  +M  RG   N  ++ +L++G+   G   +A + +++M   G  P+
Sbjct: 340 FCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +  Y+ L+ GLC NG +++A+ +   M+++    ++ TY+ +I G  K G +  A  ++ 
Sbjct: 400 IWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFC 459

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN---------TVTFNT 380
            +   G  P++V YT M+  LC   + H+  +L  KM  E    N          +T + 
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCLGDGDITISA 519

Query: 381 -FIKGLCGCGRVDWAMKLLDQMKQYEC 406
             IK +  CG   +A  LL  +K   C
Sbjct: 520 ELIKKMLSCG---YAPSLLGDIKPVGC 543



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 204/399 (51%), Gaps = 1/399 (0%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
           SG  +   L     ++ K+ +A  L  EMV     P+++ ++ ++S++  +   +  + +
Sbjct: 48  SGGDLRERLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISL 107

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
             +M V G   ++++F  ++  +    +   A  +  +M++ G+ P+ V   +L++G C 
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCR 167

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              + +AVS+  +M E    P++  Y+A+ID   K   +  A   +  +   G  PNVV 
Sbjct: 168 RNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVT 227

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT +V  LC +  ++ A  L+  M      PN +T++  +      G+V  A ++ ++M 
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P+I TY+ L++GL   +R+ EA ++   +   G   ++V+YNT+++G C+A  V 
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +  +L  KM   G   + +T+N +I  + + G V+ A +   ++   G  +PDI +Y  L
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFG-VSPDIWTYNIL 406

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L G+C++G +++A +  + M    +  +  T+  +++ +
Sbjct: 407 LGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 173/332 (52%), Gaps = 1/332 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F  LL   +   +      L  +M   G   ++  ++ +I+  C    +  A+SV
Sbjct: 83  PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P+  T  +L++GF +   +  A  + ++M+  G  P++VAY  ++  LC+
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCK 202

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               + A    +++  +   PN VT+   + GLC  GR + A +LL  M + +  PN+ T
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y+ LLD  ++  +V EA E+  E+ +  I  +IVTY+++++G+C    + EA Q+   M+
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +++N +I  +CK  +V + ++L  ++   G  N + ++Y +L+ G    G +
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVN-NTVTYNTLIQGFFQVGDV 381

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +A  +  +M + G+ P+  T+N+L+  L  N
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN 413



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 160/322 (49%), Gaps = 1/322 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L K  L   + H+A +L+  M++    P++V ++ L+  +      D  +S+  +ME   
Sbjct: 56  LSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG 115

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ T++ +I+ F     +  A  +  +M+  G  P+ V    +V   C+ N    A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL++KM      P+ V +N  I  LC   RV+ A+    ++ +    PN+ TY  L++GL
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
               R  +A  L+ ++ K  I  N++TY+ +L    + G V+EA ++  +M+      D 
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T++ +I   C   +++ A Q+ D +   G + PD++SY +L+ G C +  +++     +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCF-PDVVSYNTLINGFCKAKRVEDGMKLFR 354

Query: 541 KMLNEGICPNFATWNVLVRSLF 562
           KM   G+  N  T+N L++  F
Sbjct: 355 KMSQRGLVNNTVTYNTLIQGFF 376



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 180/347 (51%), Gaps = 11/347 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   ++      +++  +G+  +   + +++N     G    A ++   + +  
Sbjct: 196 IIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRK 255

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ +LDA +   +      I+  M R  ++P++ TY+ L+  LC ++R+D A 
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++   M +KGC PD VSY T+++  CK  +VE+     R+++ R   +    YN LI G 
Sbjct: 316 QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGF 375

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +   +++A     +M   G+ P++ TY+ ++  LCD G +E +L I   M     + +I
Sbjct: 376 FQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T++++G    G+  +A  L+  +  +G  P++V Y+T++ GLC+ G   E  ++  +
Sbjct: 436 VTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTK 495

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           M++     N    S L  G    G++  ++++  +M+S G +P+++ 
Sbjct: 496 MKQEGLMKN---DSMLCLG---DGDITISAELIKKMLSCGYAPSLLG 536



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 1/209 (0%)

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            H A +L  +M      P+ V FN  +  +    + D  + L  +M+      ++ T+N 
Sbjct: 66  LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           +++      +V  A  ++ ++ K G + + VT  ++++G CR   V +A  L+ KM+  G
Sbjct: 126 VINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + D + +N II + CK  +VN+A+     I G     P++++YT+L+ G+CNSG   +A
Sbjct: 186 YRPDIVAYNAIIDSLCKTRRVNDALDFFKEI-GRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              L+ M+   I PN  T++ L+ +   N
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKN 273


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 246/501 (49%), Gaps = 9/501 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  + +++ M   G+      F  ++ SY R G    A+++   +++ G  P + I N  
Sbjct: 143 DPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMA 202

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           ++ L+   R          M+R G++P+V TYN L+K LC   R+  A +++  M   GC
Sbjct: 203 VNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGC 262

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFG-SGV----SVYNALINGLCKEHKIEEAFW 186
            PD +SY T++S +CK  +V + + L  R   +G+      YN LI+GL K    +EA  
Sbjct: 263 LPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALS 322

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L E   +    + + YS  + S C  G +  +  I+G+M  +GC P++ ++++++ G+ 
Sbjct: 323 FLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFC 382

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G   +A  +   M + G  PN V ++ L++GLC  G   EA  +  + EE    P+  
Sbjct: 383 RIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAI 442

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TYS ++ GF + G L  +  +  +M+  G  P  V    ++  LC       A   +E+ 
Sbjct: 443 TYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQC 502

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             + C  N V F T I G    G ++ A+ LLD M      P++ TY  ++D L R  ++
Sbjct: 503 QSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKM 562

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI-EGTKLDAITFNI 485
           KEA  LV ++   G+    VTY T++H  C  G V +   LL KML  EG    +  +N 
Sbjct: 563 KEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGF---SSAYNQ 619

Query: 486 IIYAYCKQGKVNNAIQLLDRI 506
           +I   C  GK++ A  LL ++
Sbjct: 620 VIEKLCAFGKLSEANNLLSKV 640



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 238/501 (47%), Gaps = 14/501 (2%)

Query: 53  FYR--IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK---RDGMEPNVFTYNILL 107
           F+R   R++  +   ++++ +L  LL+  R    +P    M+   R GM      +  L+
Sbjct: 112 FFRWADRQWKYRHAPEVFDEML-VLLSRTRLH--DPARRVMRLMIRRGMPRGTRQFAHLM 168

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----G 162
            +  +  ++  A ++L  M   GCAPD       V+ +   G++++A E A R       
Sbjct: 169 LSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVD 228

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             V  YN LI GLC   +I +A  ++  M+  G  P+ I+Y T++S LC    V     +
Sbjct: 229 PDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNL 288

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M   G  P+  ++  L+ G    G   EA         + F  + V YS  +H  C 
Sbjct: 289 LERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCL 348

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
           NG M EA  +  +M    C P+V TYSA++DGF + G L  A ++   M  NGC PN V 
Sbjct: 349 NGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVT 408

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +T ++  LC+     +A  L+ K   E   P+ +T++  + G    G++  +  ++ QM 
Sbjct: 409 HTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQML 468

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           Q    P     N L+  L    +  +A + + + +  G  +N+V + T++HG  R G + 
Sbjct: 469 QKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLE 528

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            A  LL  M +     D +T+ +++ A  ++GK+  A  L++++   G  +P  ++Y ++
Sbjct: 529 SALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRG-LHPTPVTYRTV 587

Query: 523 LWGICNSGGMQEAFIYLQKML 543
           +   C  G +++    L KML
Sbjct: 588 IHRYCEKGAVEDLLNLLDKML 608



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 170/353 (48%), Gaps = 11/353 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +    D     L++ + +     E  + + ++S+   G   +A ++   +   G
Sbjct: 307 LIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKG 366

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  Y+ ++D             +  +M ++G +PN  T+  LL  LCK  +   A+
Sbjct: 367 CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAW 426

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALING 174
           +LL +   +   P A++Y+ ++    + G+++E+ ++ M+      F + V + N LI+ 
Sbjct: 427 ELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEI-NLLIHA 485

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC E K  +A   + +   +G   NV+ ++T+I      G++E++L +L  M++   +P+
Sbjct: 486 LCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPD 545

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T ++      G+  EA+ L  +M+  G  P  V Y T+IH  C  G++++ +++  
Sbjct: 546 VVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLD 605

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +M         + Y+ +I+     G L  A+ + ++++      +  A TC +
Sbjct: 606 KMLAKE--GFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRD--AQTCHI 654



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/411 (21%), Positives = 173/411 (42%), Gaps = 87/411 (21%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-------YRIREFGLK 62
            +  VQ LL++M   G+   +  +  +I+   + G A++AL          +R+ E G  
Sbjct: 281 RVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYS 340

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
            TV  ++  L+  +AE +      I   M   G  P+V TY+ ++   C+   +D A K+
Sbjct: 341 ATV--HSFCLNGRMAEAK-----EIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKM 393

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCK 177
           +  M   GC P+ V++T +++ +CK+G+  EA EL  +     +      Y+ +++G  +
Sbjct: 394 MKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRR 453

Query: 178 EHKIEEAFWLLCEMVDRGIDP-----------------------------------NVIT 202
           E K++E+  ++ +M+ +G  P                                   NV+ 
Sbjct: 454 EGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVN 513

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           ++T+I      G++E++L +L  M++   +P++ ++T ++      G+  EA+ L  +M+
Sbjct: 514 FTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKML 573

Query: 263 REGFLPNVVAYSTLI---------------------------------HGLCSNGSMDEA 289
             G  P  V Y T+I                                   LC+ G + EA
Sbjct: 574 NRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSSAYNQVIEKLCAFGKLSEA 633

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
            ++  ++   +   +  T   L+D F   G  L +  +  RM      P++
Sbjct: 634 NNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDL 684



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/331 (20%), Positives = 151/331 (45%), Gaps = 7/331 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+D  + +++ M   G   +     +++N   +VG + +A ++  +  E    P+   Y+
Sbjct: 386 ELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYS 445

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     E +      +   M + G  P     N+L+ ALC   +   A   + +  +K
Sbjct: 446 VVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSK 505

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           GC  + V++TT++    + G +E A  L            V  Y  +++ L ++ K++EA
Sbjct: 506 GCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEA 565

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+ +M++RG+ P  +TY T+I   C+ G VE  L +L +M  +    +  ++  +++ 
Sbjct: 566 TSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS--AYNQVIEK 623

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               G+  EA++L ++++R     +      L+    + G   ++ +V+ +M + +  P+
Sbjct: 624 LCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPD 683

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +     +    A AG    A ++  + +  G
Sbjct: 684 LKLCQKVDSQLALAGEKQAAGKLIIKFVERG 714


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 277/585 (47%), Gaps = 65/585 (11%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+NS    G   +A  M  +++   L P    YN IL+  + + R      I  +M+++G
Sbjct: 236 VLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNG 294

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           +E +++TYNI++  LCK  R   AY LL  M      PD  SY T++      G++  A 
Sbjct: 295 IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAI 354

Query: 155 ----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM------------------- 191
               + L       V+ Y ALI+G C+  + +EA  +L EM                   
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKC 414

Query: 192 -VDRGIDPNVITYST-------------------------------IISSLCDVGNVETS 219
            +  GIDP+VITYS                                II S C  GNV  +
Sbjct: 415 MLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEA 474

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +   M   G  P+I ++ SLL+G   GG   +A +    ++ +    +    +TL+ G
Sbjct: 475 FSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVG 534

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           +C +G++DEA+ +  +M   +  P+  TY+ L+DGF K G ++ A  +   M+  G  P+
Sbjct: 535 ICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPD 594

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEK-MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            +AYTC++  L        A  + ++ +  E    + + +N+ + G    G+++   +L+
Sbjct: 595 TIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLM 654

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M + E  P+  +YN L+ G ++  ++     L  ++ K GI+ + VTY  ++ G+C  
Sbjct: 655 RNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEY 714

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW---NPD 515
           G++  A + L KM++EG   D + F+I+I A+ ++ K++NA+QL   ++    W   +P 
Sbjct: 715 GLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK----WLHMSPS 770

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
             +Y +++ G+     +Q+++  L  M+  G+ P    +  L+ +
Sbjct: 771 SKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINA 815



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 145/610 (23%), Positives = 285/610 (46%), Gaps = 66/610 (10%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT-VKIYNHILDA 74
           Y+  QM  + +  S   + ++I+ Y R G  ++A ++ Y ++  G++P  V     IL  
Sbjct: 355 YIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKC 414

Query: 75  LLAENRFSMINP---IYSNMKRDGM----------------EPNVFTYNILLKALCKNNR 115
           +LA+     I+P    YS +  +GM                  +V ++N ++ + C+   
Sbjct: 415 MLADG----IDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 470

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNA 170
           V  A+ +   M   G  PD  +Y +++  +C+ G + +A+E  +              N 
Sbjct: 471 VLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNT 530

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L+ G+CK   ++EA  L  +MV R I P+  TY+ ++   C  G V  +L +L  M  +G
Sbjct: 531 LLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKG 590

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEA 289
             P+  ++T LL G +  G+   AS ++  +I +EG   + +AY+++++G    G ++E 
Sbjct: 591 LVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEI 650

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +   M EN   P+  +Y+ L+ G+ K G L     ++  M+  G  P+ V Y  ++  
Sbjct: 651 ERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFG 710

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC+  +   A   +EKM  E   P+ + F+  IK      ++  A++L   MK     P+
Sbjct: 711 LCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWLHMSPS 770

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY--------------------- 448
             TY  +++GL+R N +++++E++ ++ + G+Q     Y                     
Sbjct: 771 SKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDIDGAFELKE 830

Query: 449 --------------NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
                         ++I+ G+C+ G V EA  +   ++  G      TF  +++  CK+ 
Sbjct: 831 DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 890

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K+++A  L   +   G    D+++Y  L+ G+CN   + +A    ++M ++G+ PN  T+
Sbjct: 891 KIDDAFHLKQLMESCG-LKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTY 949

Query: 555 NVLVRSLFSN 564
             L  ++++ 
Sbjct: 950 ITLTGAMYAT 959



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/583 (24%), Positives = 270/583 (46%), Gaps = 46/583 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+   + +L+ M  +G+      + ++IN     G+  +A +    +    +   V  +N
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINE----GMIAEAEQFKQYMSRMKISFDVASFN 459

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+D+            +Y NM R G  P++ TY  LL+ LC+   +  A + +V +  K
Sbjct: 460 CIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK 519

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
            CA D  +  T++  ICK G ++EA +L  +  +         Y  L++G CK  K+  A
Sbjct: 520 ACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPA 579

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLK 243
             LL  M+++G+ P+ I Y+ +++ L + G V+ +  +  ++  + G   +  ++ S++ 
Sbjct: 580 LILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMN 639

Query: 244 GYLLGGRTHEASDL-----------------------------------WNRMIREGFLP 268
           GYL GG+ +E   L                                   +  M++EG  P
Sbjct: 640 GYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKP 699

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           + V Y  LI GLC  G ++ AV    +M      P+   +  LI  F++   +  A Q++
Sbjct: 700 DNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLF 759

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + M     SP+   Y  MV  L + N   Q++ ++  M      P    +   I   C  
Sbjct: 760 SYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRV 819

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G +D A +L + MK    +P+    + ++ GL +  +V+EA  + + I + G+   I T+
Sbjct: 820 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 879

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
            T++HG+C+   + +AF L   M   G K+D +T+N++I   C +  + +A+ L + ++ 
Sbjct: 880 TTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKS 939

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
            G   P+I +Y +L   +  +G MQ+    L+ + + GI P++
Sbjct: 940 KGLL-PNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSY 981



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/622 (25%), Positives = 292/622 (46%), Gaps = 82/622 (13%)

Query: 17  LLQQMKVEGVSCSEGVFISV------------------INSYRRVGLAEQALKMFYRIRE 58
           +L+ + + G SCS  +F S+                  +N+Y + G    A    + + E
Sbjct: 130 VLRHLALTGFSCS-AIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDE 188

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G K ++   N+IL+AL+  N+   +              +V T NI+L +LC   ++  
Sbjct: 189 CGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSK 248

Query: 119 AYKLLVEMGNKGCA-PDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALI 172
           A  +L +M N  C  P+AV+Y TI++   K G+ + A R L     +G+      YN +I
Sbjct: 249 AESMLQKMKN--CRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI 306

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           + LCK  +   A+ LL  M +  + P+  +Y+T+I      G +  ++ I  QM  +   
Sbjct: 307 DKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLK 366

Query: 233 PNIHSFTSLLKGYLLGGRTHE--------------------ASDLWNRMIREGFLPNVVA 272
           P++ ++T+L+ GY   GRT E                    A  +   M+ +G  P+V+ 
Sbjct: 367 PSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVIT 426

Query: 273 YSTLIH-------------------------------GLCSNGSMDEAVSVSYQMEENSC 301
           YS LI+                                 C  G++ EA SV   M  +  
Sbjct: 427 YSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGW 486

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           PP++ TY +L+ G  + G+L+ A +    ++   C+ +      ++  +C++    +A  
Sbjct: 487 PPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALD 546

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L EKM   N  P+T T+   + G C  G+V  A+ LL  M +   +P+   Y  LL+GL+
Sbjct: 547 LCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLV 606

Query: 422 RVNRVKEAFELVTEIE-KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
              +VK A  +  EI  K G+  + + YN++++G  + G + E  +L+  M        +
Sbjct: 607 NEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSS 666

Query: 481 ITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            ++NI+++ Y K+G+++  + L  D ++ G    PD ++Y  L++G+C  G ++ A  +L
Sbjct: 667 ASYNILMHGYIKKGQLSRTLYLYRDMVKEG--IKPDNVTYRLLIFGLCEYGLIEIAVKFL 724

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
           +KM+ EG+ P+   +++L+++ 
Sbjct: 725 EKMVLEGVFPDNLAFDILIKAF 746



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/485 (24%), Positives = 228/485 (47%), Gaps = 26/485 (5%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           N+F+ ++L+ A  K  +V  A   +  M   G      S   I++++  + + E      
Sbjct: 159 NLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFL 218

Query: 155 -RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              L  +F   V+  N ++N LC + K+ +A  +L +M +  + PN +TY+TI++     
Sbjct: 219 KESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKK 277

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G  +++L IL  M   G   +++++  ++       R+  A  L  RM      P+  +Y
Sbjct: 278 GRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSY 337

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLIHG    G ++ A+ +  QM   S  P+V TY+ALIDG+ + G    A ++   M  
Sbjct: 338 NTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  P  V+               +A  +++ M  +   P+ +T++  I      G +  
Sbjct: 398 TGVRPREVS---------------KAKQILKCMLADGIDPDVITYSALINE----GMIAE 438

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A +    M + +   ++ ++N ++D   +   V EAF +   + + G   +I TY ++L 
Sbjct: 439 AEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLR 498

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C+ G +V+A + +  +L +   +D  T N ++   CK G ++ A+ L +++       
Sbjct: 499 GLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL- 557

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           PD  +YT LL G C  G +  A I LQ ML +G+ P+   +  L+  L +        Y+
Sbjct: 558 PDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 617

Query: 574 LDDIM 578
             +I+
Sbjct: 618 FQEII 622


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 236/496 (47%), Gaps = 32/496 (6%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +  K++ V C+      +I+        ++A+   +R+R     P V  Y  +L   L +
Sbjct: 270 EDFKLDTVLCTH-----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 324

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      I + M  +G  PN   +N L+ + C       AYKLL  M   GC P  V Y
Sbjct: 325 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 384

Query: 139 TTIVSSICKLGQVEEAR--ELAMRFGSGVSVYNALING---------LCKEHKIEEAFWL 187
              + SIC   ++      +LA +    +   N ++N          LC   K ++AF L
Sbjct: 385 NIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQL 444

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           + EM+ +G  P+  TYS +I+ LC    VE +  +  +M + G  P+++++T L+  +  
Sbjct: 445 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 504

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   +A  L+  M   G  P VV Y+ LIH       + +A  + ++M +  C PN  T
Sbjct: 505 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVT 564

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCS----------------PNVVAYTCMVKVLC 351
           Y AL+DG  KAGN+  A +++ ++I    S                PNVV Y  +V  LC
Sbjct: 565 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 624

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           + +    AH L++ M    C PN + ++  I G C  G++D A ++  QM +   LP++ 
Sbjct: 625 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 684

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY  L+D + +  R+  A ++++++ K     N+VTY  ++ G+CR G   +A +LL  M
Sbjct: 685 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 744

Query: 472 LIEGTKLDAITFNIII 487
             +G   + +T+  +I
Sbjct: 745 EEKGCSPNVVTYTALI 760



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 151/582 (25%), Positives = 260/582 (44%), Gaps = 66/582 (11%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G+  +AL+   R+++FG +P+   YN ++  L +  +  +   +   M   G   + F
Sbjct: 186 RGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRF 245

Query: 102 TYNILLKALCKNNR--------------------------------VDGAYKLLVEMGNK 129
           T      ALCK  R                                 D A   L  M   
Sbjct: 246 TVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN 305

Query: 130 GCAPDAVSYTTIVSSICK---LGQVEEARELAMRFG--SGVSVYNALINGLCKEHKIEEA 184
            C P+ V+Y T++S   K   LG  +    + M  G     S++N+L++  C E     A
Sbjct: 306 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA 365

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET------SLGILGQMFVRGC---NPNI 235
           + LL  M   G  P  + Y+  I S+C    + +      +  I G+M    C     N+
Sbjct: 366 YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNV 425

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F   L G    G+  +A  L   M+R+GF+P+   YS +I  LC    +++A  +  +
Sbjct: 426 ANFARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE 482

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+     P+V TY+ LID F KAG +  A  ++  M S GCSP VV YT ++    +   
Sbjct: 483 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 542

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-------------- 401
             QA+ +  +M    C PN VT+   + GLC  G +  A ++  ++              
Sbjct: 543 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 602

Query: 402 --KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
              ++   PN+ TY  L+DGL + ++V  A EL+  +   G + N + Y+ ++ G C+AG
Sbjct: 603 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 662

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A ++  +M   G      T+  +I    K G+++ A+++L ++       P++++Y
Sbjct: 663 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS-CTPNVVTY 721

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           T+++ G+C  G  ++A   L  M  +G  PN  T+  L+  L
Sbjct: 722 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 208/441 (47%), Gaps = 27/441 (6%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K ++   + ++  M  EG + +  +F S+++SY        A K+  R+   G  P   
Sbjct: 323 KKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 382

Query: 67  IYNHILDALLAENRF------SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +YN  + ++  + +        +   IY  M       N        + LC   + D A+
Sbjct: 383 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 442

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAM-RFGSGVSVYNALINGL 175
           +L+ EM  KG  PD  +Y+ +++ +C   +VE+A    +E+ M      V  Y  LI+  
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   IE+A WL  EM   G  P V+TY+ +I +      V  +  I  +M   GC PN 
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI----------------REGFLPNVVAYSTLIHG 279
            ++ +L+ G    G   +A +++ ++I                R    PNVV Y  L+ G
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 622

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC    +D A  +   M  + C PN   Y ALIDGF KAG +  A +++ +M   G  P+
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 682

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++  + ++     A  ++ +M  ++C PN VT+   I GLC  G  + A+KLL 
Sbjct: 683 VHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLS 742

Query: 400 QMKQYECLPNITTYNELLDGL 420
            M++  C PN+ TY  L+DGL
Sbjct: 743 LMEEKGCSPNVVTYTALIDGL 763



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 174/332 (52%), Gaps = 21/332 (6%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           VG  ++A ++   +   G  P    Y+ ++  L    +      ++  MK  G+ P+V+T
Sbjct: 435 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 494

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF- 161
           Y IL+ + CK   ++ A  L  EM + GC+P  V+YT ++ +  K  QV +A ++  R  
Sbjct: 495 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 554

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMV---------------DR-GIDPNVI 201
            +G       Y AL++GLCK   I +AF +  +++               DR  + PNV+
Sbjct: 555 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 614

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY  ++  LC    V+ +  +L  M   GC PN   + +L+ G+   G+   A +++ +M
Sbjct: 615 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 674

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            + G+LP+V  Y++LI  +  +G +D A+ V  QM ++SC PNV TY+A+IDG  + G  
Sbjct: 675 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 734

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             A ++ + M   GCSPNVV YT ++  L Q+
Sbjct: 735 EKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 155/302 (51%), Gaps = 14/302 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+MK+ GV+     +  +I+S+ + GL EQA  +F  +R  G  PTV  Y  ++ A L
Sbjct: 479 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 538

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +    N I+  M   G  PN  TY  L+  LCK   +  A+++  ++     + D+ 
Sbjct: 539 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 598

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
            Y             E+   LA      V  Y AL++GLCK HK++ A  LL  M+  G 
Sbjct: 599 FYFP----------CEDRHTLA----PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGC 644

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           +PN I Y  +I   C  G ++++  +  QM   G  P++H++TSL+      GR   A  
Sbjct: 645 EPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 704

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           + ++M+++   PNVV Y+ +I GLC  G  ++A+ +   MEE  C PNV TY+ALIDG  
Sbjct: 705 VLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 764

Query: 317 KA 318
           ++
Sbjct: 765 QS 766



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/561 (22%), Positives = 244/561 (43%), Gaps = 40/561 (7%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPI 87
           ++ V ++V+ + R     E   + F +  R+ G   T   Y+ + DAL  + R      +
Sbjct: 104 TDSVVVAVLGAVRDA--PELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERL 161

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
              +  +  E      N+L++  C+    + A + L  + + G  P  V+Y  +V  +  
Sbjct: 162 LREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSS 221

Query: 148 LGQVEEARELAMRFGSGVS---------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            GQV+    L  R    +S               + LCKE +  +A  ++ E  D  +D 
Sbjct: 222 AGQVD----LGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMI-EREDFKLDT 276

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
            + T+  +IS L +    + ++  L +M    C PN+ ++ +LL G+L   +      + 
Sbjct: 277 VLCTH--MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 334

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           N M+ EG  PN   +++L+H  C+      A  +  +M    CPP    Y+  I      
Sbjct: 335 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQ 394

Query: 319 GNLLG------ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
             L        A +I+  M++  C  N V      + LC    F +A  LI++M  +   
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 454

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+T T++  I  LC   +V+ A  L  +MK     P++ TY  L+D   +   +++A  L
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             E+   G    +VTY  ++H   +A  V +A  +  +M+  G + + +T+  ++   CK
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574

Query: 493 QGKVNNAIQLLDRIRGGGE---------------WNPDIISYTSLLWGICNSGGMQEAFI 537
            G ++ A ++  ++ G  +                 P++++Y +L+ G+C +  +  A  
Sbjct: 575 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634

Query: 538 YLQKMLNEGICPNFATWNVLV 558
            L  ML+ G  PN   ++ L+
Sbjct: 635 LLDAMLSSGCEPNHIVYDALI 655


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 233/457 (50%), Gaps = 10/457 (2%)

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS 163
           L  LCK  +   A   L +M  +G  PD +  T ++  +    + E+A    E+  ++G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143

Query: 164 GVS-VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             S  YNA+I+G C+  + + A  ++  M  RG  P+V+TY+ +I SLC  G ++ +L +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           + Q+    CNP + ++T L++  ++ G   +A  L + M+  G  P++  Y+ ++ G+C 
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +D A      +      P++  Y+ L+ G    G      ++ + MI  GC PN+V 
Sbjct: 264 RGLVDRAFEFVSNLNTT---PSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVT 320

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y+ ++  LC++    +A  ++  M  +   P+   ++  I   C  G+VD A+  +D M 
Sbjct: 321 YSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMI 380

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               LP+I  YN ++  L +  R  EA  +  ++E+ G   N  +YNT+   +  +G  +
Sbjct: 381 SAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKI 440

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTS 521
            A  ++ +ML  G   D IT+N +I + C+ G V+ AI LL D  R   EW P +ISY  
Sbjct: 441 RALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERT--EWQPTVISYNI 498

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +L G+C +  + +A   L  M++ G  PN  T+ +LV
Sbjct: 499 VLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLV 535



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 237/474 (50%), Gaps = 9/474 (1%)

Query: 34  ISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           +  +N   + G   +AL    ++ + G KP V +   ++  L    R      +   +++
Sbjct: 81  MKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQ 140

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            G +P+ F YN ++   C+++R D A ++++ M  +G +PD V+Y  ++ S+C  G+++ 
Sbjct: 141 YG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDL 199

Query: 154 ARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A ++  +         V  Y  LI        I++A  LL EM+ RG+ P++ TY+ I+ 
Sbjct: 200 ALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVR 259

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            +C  G V+ +   +  +      P+++ +  LLKG L  GR      L + MI +G  P
Sbjct: 260 GMCKRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEP 316

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           N+V YS LI  LC +G   EAV V   M+E    P+   Y  LI  F K G +  A    
Sbjct: 317 NIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFV 376

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + MIS G  P++V Y  ++  LC+     +A ++ +K+    CPPN  ++NT    L   
Sbjct: 377 DDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSS 436

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G    A+ ++ +M      P+  TYN L+  L R   V EA  L+ ++E+   Q  +++Y
Sbjct: 437 GDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISY 496

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           N +L G+C+A  +V+A ++L  M+  G + +  T+ +++      G  + A++L
Sbjct: 497 NIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVEL 550



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 215/442 (48%), Gaps = 38/442 (8%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           Y L+QM   G      +   +I         E+A+++   + ++G  P    YN ++   
Sbjct: 98  YFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAYNAVISGF 156

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              +RF   N +   MK  G  P+V TYNIL+ +LC   ++D A K++ ++    C P  
Sbjct: 157 CRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTV 216

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF----- 185
           ++YT ++ +    G +++A  L     S      +  YN ++ G+CK   ++ AF     
Sbjct: 217 ITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSN 276

Query: 186 ----------------------W-----LLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                                 W     L+ +M+ +G +PN++TYS +ISSLC  G    
Sbjct: 277 LNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGE 336

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           ++ +L  M  +G NP+ + +  L+  +   G+   A    + MI  G+LP++V Y+T++ 
Sbjct: 337 AVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMG 396

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            LC  G  DEA+++  ++EE  CPPN ++Y+ +      +G+ + A  +   M+SNG  P
Sbjct: 397 SLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDP 456

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           + + Y  ++  LC++ M  +A  L+  M      P  +++N  + GLC   R+  A+++L
Sbjct: 457 DRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVL 516

Query: 399 DQMKQYECLPNITTYNELLDGL 420
             M    C PN TTY  L++G+
Sbjct: 517 AVMVDNGCQPNETTYTLLVEGV 538



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 195/374 (52%), Gaps = 5/374 (1%)

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++ LC  G    +L  L QM  RG  P++   T L+KG     RT +A  +   + + G 
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+  AY+ +I G C +   D A  V  +M+     P+V TY+ LI      G L  A +
Sbjct: 144 -PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           + ++++ + C+P V+ YT +++    +     A  L+++M      P+  T+N  ++G+C
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G VD A + +  +      P++  YN LL GLL   R +    L++++   G + NIV
Sbjct: 263 KRGLVDRAFEFVSNLNT---TPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY+ ++  +CR G   EA  +L  M  +G   DA  ++ +I A+CK+GKV+ AI  +D +
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM 379

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
              G W PDI++Y +++  +C  G   EA    +K+   G  PN +++N +  +L+S+  
Sbjct: 380 ISAG-WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGD 438

Query: 567 HLGPVYILDDIMAN 580
            +  + ++ ++++N
Sbjct: 439 KIRALTMILEMLSN 452



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 179/376 (47%), Gaps = 37/376 (9%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             D    ++ +MK  G S     +  +I S    G  + ALK+  ++ E    PTV  Y 
Sbjct: 161 RFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYT 220

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY--------- 120
            +++A +          +   M   G++P+++TYN++++ +CK   VD A+         
Sbjct: 221 ILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTT 280

Query: 121 -----------------------KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
                                  +L+ +M  KGC P+ V+Y+ ++SS+C+ G+  EA ++
Sbjct: 281 PSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDV 340

Query: 158 --AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
              M+          Y+ LI+  CKE K++ A   + +M+  G  P+++ Y+TI+ SLC 
Sbjct: 341 LRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCK 400

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  + +L I  ++   GC PN  S+ ++       G    A  +   M+  G  P+ + 
Sbjct: 401 KGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRIT 460

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y++LI  LC +G +DEA+ +   ME     P V +Y+ ++ G  KA  ++ A ++   M+
Sbjct: 461 YNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMV 520

Query: 333 SNGCSPNVVAYTCMVK 348
            NGC PN   YT +V+
Sbjct: 521 DNGCQPNETTYTLLVE 536



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 67/322 (20%)

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV------------------------ 341
           T +   ++   K G    A     +M+  G  P+V+                        
Sbjct: 78  THHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEI 137

Query: 342 ----------AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
                     AY  ++   C+++ F  A+ +I +M +    P+ VT+N  I  LC  G++
Sbjct: 138 LEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKL 197

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A+K++DQ+ +  C P + TY  L++  +    + +A  L+ E+   G+Q ++ TYN I
Sbjct: 198 DLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVI 257

Query: 452 LHGVCRAGMVVEAFQ--------------------------------LLGKMLIEGTKLD 479
           + G+C+ G+V  AF+                                L+  M+++G + +
Sbjct: 258 VRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPN 317

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +T++++I + C+ GK   A+ +L  ++  G  NPD   Y  L+   C  G +  A  ++
Sbjct: 318 IVTYSVLISSLCRDGKAGEAVDVLRVMKEKG-LNPDAYCYDPLISAFCKEGKVDLAIGFV 376

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
             M++ G  P+   +N ++ SL
Sbjct: 377 DDMISAGWLPDIVNYNTIMGSL 398



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 40/279 (14%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G +P +  Y+ ++ +L  + +      +   MK  G+ P+ + Y+ L+ A CK  +VD A
Sbjct: 313 GCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLA 372

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALING 174
              + +M + G  PD V+Y TI+ S+CK G+ +EA  +  +          S YN +   
Sbjct: 373 IGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGA 432

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L        A  ++ EM+  G+DP+ ITY+++ISSLC  G V+ ++G+L  M        
Sbjct: 433 LWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDME------- 485

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
                                       R  + P V++Y+ ++ GLC    + +A+ V  
Sbjct: 486 ----------------------------RTEWQPTVISYNIVLLGLCKAHRIVDAIEVLA 517

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
            M +N C PN TTY+ L++G   AG    A ++   ++S
Sbjct: 518 VMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVS 556



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 9/255 (3%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           + L+  M V+G   +   +  +I+S  R G A +A+ +   ++E GL P    Y+ ++ A
Sbjct: 303 ERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISA 362

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
              E +  +      +M   G  P++  YN ++ +LCK  R D A  +  ++   GC P+
Sbjct: 363 FCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPN 422

Query: 135 AVSYTTIVSSICKLGQVEEARELAM---RFGSGVS----VYNALINGLCKEHKIEEAFWL 187
           A SY T+  ++   G  ++ R L M      +GV      YN+LI+ LC++  ++EA  L
Sbjct: 423 ASSYNTMFGALWSSG--DKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGL 480

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L +M      P VI+Y+ ++  LC    +  ++ +L  M   GC PN  ++T L++G   
Sbjct: 481 LVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGY 540

Query: 248 GGRTHEASDLWNRMI 262
            G    A +L   ++
Sbjct: 541 AGWRSYAVELAKSLV 555



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 35/180 (19%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE----NRFSMI------ 84
           +++ S  + G A++AL +F ++ E G  P    YN +  AL +        +MI      
Sbjct: 393 TIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSN 452

Query: 85  ---------NPIYSNMKRDGM----------------EPNVFTYNILLKALCKNNRVDGA 119
                    N + S++ RDGM                +P V +YNI+L  LCK +R+  A
Sbjct: 453 GVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDA 512

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
            ++L  M + GC P+  +YT +V  +   G    A ELA    S  ++   L   L K++
Sbjct: 513 IEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMNAISQDLFRRLQKQN 572


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 228/453 (50%), Gaps = 6/453 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           Y  +L+   +  ++D +  L   M      P    ++ ++S+I K+ + +    L     
Sbjct: 49  YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            +     +   N L+N  C+  ++  A   L +M+  G +P+++T+ ++++  C    V 
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  QM   G  PN+  + +++ G     +   A DL NRM ++G  P+VV Y++LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            GLCS+G   +A  +   M +    P+V T++ALID   K G +  A + +  MI     
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P++V Y+ ++  LC  +   +A  +   M  + C P+ VT++  I G C   +V+  MKL
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             +M Q   + N  TY  L+ G  R  ++  A E+   +  CG+  NI+TYN +LHG+C 
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + +A  +L  M   G   D +T+NIII   CK G+V +A  +   +   G   PDI 
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG-LMPDIW 467

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           +YT+++ G+   G  +EA    +KM  +GI PN
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 231/434 (53%), Gaps = 5/434 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + +L +F+ + +    P++  ++ +L A+    ++ ++  ++  M+  G+  N+ T NIL
Sbjct: 63  DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           L   C+ +++  A   L +M   G  P  V++ ++++  C+  +V +A     + + M +
Sbjct: 123 LNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY 182

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V +YN +I+GLCK  +++ A  LL  M   GI P+V+TY+++IS LC  G    +  
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           ++  M  R   P++ +F +L+   +  GR  EA + +  MIR    P++V YS LI+GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
               +DEA  +   M    C P+V TYS LI+G+ K+  +    +++  M   G   N V
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT +++  C+    + A  +  +M F    PN +T+N  + GLC  G+++ A+ +L  M
Sbjct: 363 TYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           ++     +I TYN ++ G+ +   V +A+++   +   G+  +I TY T++ G+ + G+ 
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482

Query: 462 VEAFQLLGKMLIEG 475
            EA  L  KM  +G
Sbjct: 483 READALFRKMKEDG 496



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 217/400 (54%), Gaps = 1/400 (0%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           ++ ++ L++ + K  K +   +L  +M   GI  N+ T + +++  C    +  +L  LG
Sbjct: 81  IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M   G  P+I +F SLL G+  G R ++A  ++++M+  G+ PNVV Y+T+I GLC + 
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            +D A+ +  +ME++   P+V TY++LI G   +G    A+++ + M      P+V  + 
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFN 260

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++    +     +A    E+M   +  P+ VT++  I GLC   R+D A ++   M   
Sbjct: 261 ALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C P++ TY+ L++G  +  +V+   +L  E+ + G+  N VTY  ++ G CRAG +  A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            ++  +M+  G   + IT+N++++  C  GK+  A+ +L  ++  G  + DI++Y  ++ 
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNG-MDADIVTYNIIIR 439

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G+C +G + +A+     +  +G+ P+  T+  ++  L+  
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 183/348 (52%), Gaps = 5/348 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F S++N + R      AL MF ++   G KP V IYN I+D L    +      + + M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           ++DG+ P+V TYN L+  LC + R   A +++  M  +   PD  ++  ++ +  K G+V
Sbjct: 213 EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRV 272

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA E     +       +  Y+ LI GLC   +++EA  +   MV +G  P+V+TYS +
Sbjct: 273 SEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+  C    VE  + +  +M  RG   N  ++T L++GY   G+ + A +++ RM+  G 
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV 392

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN++ Y+ L+HGLC NG +++A+ +   M++N    ++ TY+ +I G  KAG +  A  
Sbjct: 393 HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           I+  +   G  P++  YT M+  L +  +  +A +L  KM  +   PN
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 209/417 (50%), Gaps = 5/417 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++++  ++   +  + ++ +++  G+   +   N +L+     ++ S+       M 
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP++ T+  LL   C+ +RV  A  +  +M   G  P+ V Y TI+  +CK  QV+
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A +L  R      G  V  YN+LI+GLC   +  +A  ++  M  R I P+V T++ +I
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
            +    G V  +     +M  R  +P+I +++ L+ G  +  R  EA +++  M+ +G  
Sbjct: 264 DACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF 323

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+VV YS LI+G C +  ++  + +  +M +     N  TY+ LI G+ +AG L  A +I
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           + RM+  G  PN++ Y  ++  LC N    +A  ++  M       + VT+N  I+G+C 
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            G V  A  +   +     +P+I TY  ++ GL +    +EA  L  ++++ GI  N
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 205/401 (51%), Gaps = 2/401 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           + +G      L NG+ +  K++++  L   MV     P++  +S ++S++  +   +  +
Sbjct: 43  YSNGSDYREMLRNGI-RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVI 101

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM + G   N+ +   LL  +    +   A     +MI+ G  P++V + +L++G 
Sbjct: 102 YLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    + +A+ +  QM      PNV  Y+ +IDG  K+  +  A  + NRM  +G  P+V
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++  LC +  +  A  ++  M      P+  TFN  I      GRV  A +  ++
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +    P+I TY+ L+ GL   +R+ EA E+   +   G   ++VTY+ +++G C++  
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           V    +L  +M   G   + +T+ I+I  YC+ GK+N A ++  R+   G  +P+II+Y 
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG-VHPNIITYN 400

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            LL G+C++G +++A + L  M   G+  +  T+N+++R +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 181/348 (52%), Gaps = 1/348 (0%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+I  F+ LL       +      LW +M   G   N+   + L++  C    +  A+S 
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +    P++ T+ +L++GF +   +  A  ++++M+  G  PNVV Y  ++  LC+
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           +     A  L+ +M  +   P+ VT+N+ I GLC  GR   A +++  M + E  P++ T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +N L+D  ++  RV EA E   E+ +  +  +IVTY+ +++G+C    + EA ++ G M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G   D +T++I+I  YCK  KV + ++L   +   G    + ++YT L+ G C +G +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYTILIQGYCRAGKL 377

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
             A    ++M+  G+ PN  T+NVL+  L  N      + IL D+  N
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 163/332 (49%), Gaps = 11/332 (3%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           Y+  QM   G   +  ++ ++I+   +    + AL +  R+ + G+ P V  YN ++  L
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
            +  R+S    + S M +  + P+VFT+N L+ A  K  RV  A +   EM  +   PD 
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWL 187
           V+Y+ ++  +C   +++EA E+   FG  VS         Y+ LING CK  K+E    L
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEM---FGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
            CEM  RG+  N +TY+ +I   C  G +  +  I  +M   G +PNI ++  LL G   
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G+  +A  +   M + G   ++V Y+ +I G+C  G + +A  +   +      P++ T
Sbjct: 409 NGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWT 468

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           Y+ ++ G  K G    A  ++ +M  +G  PN
Sbjct: 469 YTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 160/309 (51%), Gaps = 5/309 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D    LL +M+ +G+      + S+I+     G    A +M   + +  
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++DA + E R S     Y  M R  ++P++ TY++L+  LC  +R+D A 
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           ++   M +KGC PD V+Y+ +++  CK  +VE   +L               Y  LI G 
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGY 371

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  +   MV  G+ PN+ITY+ ++  LCD G +E +L IL  M   G + +I
Sbjct: 372 CRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADI 431

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  +++G    G   +A D++  +  +G +P++  Y+T++ GL   G   EA ++  +
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491

Query: 296 MEENSCPPN 304
           M+E+   PN
Sbjct: 492 MKEDGILPN 500



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 94/175 (53%), Gaps = 1/175 (0%)

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++D ++ L   M Q   LP+I  ++ LL  + ++ +      L  +++  GI  N+ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +L+  CR   +  A   LGKM+  G +   +TF  ++  +C+  +V +A+ + D++ G 
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G + P+++ Y +++ G+C S  +  A   L +M  +GI P+  T+N L+  L S+
Sbjct: 181 G-YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 270/561 (48%), Gaps = 13/561 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+     L++M+  G   +   + S++ S+ + G   +A+ +F  +   G +P +  +N 
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L    +      ++ +M   G +P+V TYN ++  LCK  ++D A  LL  M  + 
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED 179

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEAF 185
            +P  V+YTT++  +CK  ++++A E+  +   G        Y+ L N L +  K+ EA 
Sbjct: 180 VSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEAS 239

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLC--DVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
            +  +M  + +     TYS ++  L   D GNVE +  ++ +M  +   P+ ++++ L+ 
Sbjct: 240 RVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAA-KLVTEMMGKKIAPDFYAYSILIN 298

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G     R  EA +++  M   G  P VV Y+TL+ GL S   + +A+ ++Y M +    P
Sbjct: 299 GLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLP 358

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  +Y+ +I GF   G+   A  ++  MI +G   N   Y  M+    ++  +  A  L 
Sbjct: 359 DTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLF 418

Query: 364 EKMAF---ENCP-PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           ++M     +  P PN  T+   I  LC   +V+ A KLL  M+    +P++  +  LL  
Sbjct: 419 KRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSR 478

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L R  R+ +AFEL  E+ +   Q  + + N +L G+ R G V EA   L +M   G   D
Sbjct: 479 LARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPD 538

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T++ ++   C QGK + A +L++ +   G+  P+      LL  +C  G  Q A+ + 
Sbjct: 539 KFTYDKLVVGLCWQGKADQARKLVEELVRDGK-RPENQGLRQLLGALCAQGDFQGAYEFY 597

Query: 540 QKMLNEGICPNFATWNVLVRS 560
             + + G+       N LV S
Sbjct: 598 CWLPSVGVEVTLGMHNTLVTS 618



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/492 (28%), Positives = 227/492 (46%), Gaps = 44/492 (8%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF----GSGVSVYNALINGLCKEHKI 181
           M   G  P+A+ Y  ++S +CK G + EA     R        V  YN +I+G CK   I
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNI 60

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           E+A   L EM + G  P    YS+I+ S C  GNV  ++ +  +M  +GC P+I +F  L
Sbjct: 61  EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 120

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L G     + HEA +L+  M   G  P+VV Y+T+I GLC    +DEAV +  +M++   
Sbjct: 121 LSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 180

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT----------------- 344
            P   TY+ LID   K   L  A +++ +M    C+    AY+                 
Sbjct: 181 SPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASR 240

Query: 345 -----CMVKVLCQNNMFH--------------QAHSLIEKMAFENCPPNTVTFNTFIKGL 385
                C   V   +N +               +A  L+ +M  +   P+   ++  I GL
Sbjct: 241 VYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGL 300

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C   R   A ++  +M+     P + TYN LL+GLL   ++++A EL   +   G   + 
Sbjct: 301 CKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDT 360

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            +YN ++ G C  G   EA+ L   M+ +G  L+  T+N +I  + K    ++A  L  R
Sbjct: 361 CSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKR 420

Query: 506 IRGGGEWN---PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           ++ G       P++ +Y  L+  +C +  ++EAF  L  M ++G  P+   W VL+ S  
Sbjct: 421 MQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLL-SRL 479

Query: 563 SNLGHLGPVYIL 574
           +  G L   + L
Sbjct: 480 ARAGRLDDAFEL 491



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 221/472 (46%), Gaps = 18/472 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L +  ++D   +LL++MK E VS +   + ++I+   +    +QA ++F ++ E  
Sbjct: 155 MIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGP 214

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG-- 118
              T   Y+ + + L    +    + +YS+M R  +     TY++++  L K   +DG  
Sbjct: 215 CACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSK---MDGGN 271

Query: 119 --AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS----VYNA 170
             A KL+ EM  K  APD  +Y+ +++ +CK  +  EA+E+   MR G G+S     YN 
Sbjct: 272 VEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMR-GRGISPTVVTYNT 330

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L+ GL    K+++A  L   M+D+G  P+  +Y+ +I   C  G+   +  +   M   G
Sbjct: 331 LLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDG 390

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR----EGFLPNVVAYSTLIHGLCSNGSM 286
              N  ++  ++ G++       A  L+ RM      +   PN+  Y  LI  LC    +
Sbjct: 391 IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQV 450

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +EA  +   M +    P++  +  L+   A+AG L  A +++  M    C   V +   +
Sbjct: 451 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNIL 510

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  + +     +A   +++M      P+  T++  + GLC  G+ D A KL++++ +   
Sbjct: 511 LDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGK 570

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            P      +LL  L      + A+E    +   G+++ +  +NT++   C A
Sbjct: 571 RPENQGLRQLLGALCAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLA 622


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 149/550 (27%), Positives = 267/550 (48%), Gaps = 43/550 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F S   S+  + L   + ++  R+R++GL P+ +  N +L  L  +   ++        
Sbjct: 195 AFSSDPASFDLLLLCLPSAELLRRLRQYGLSPSPESCNAVLSRLPLDEAIALF------- 247

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R+  + NV ++NILLKAL    R+  A +   EM +    PD V+Y T+V   C  G+ 
Sbjct: 248 -RELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGE- 302

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                                        +E A  LL EM  +G++ N   Y+++I+ LC
Sbjct: 303 -----------------------------LENAVKLLDEMAAKGLESNATVYTSVIALLC 333

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           + G V  +L +L  M + G   +   FT+++ G+   G    A  L+  M + G   + V
Sbjct: 334 NKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRV 393

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            ++ LI+GLC  G + EA  V  +M +     +V TY+ LIDG+ K GN++ A ++ N M
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +    +PNVV YT +   LC+      A+ L+ +M  +    N  T+N+ I GLC  G +
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL 513

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           + AM+++ +M+      ++ TY  L+D L +      A  ++ E+   GI+ +I TYN +
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           ++G C +G V    +LL  ML +  + + +T+N ++  YC    + +  ++   +    E
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMH-SQE 632

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
             P+  +Y  L+ G C +  M+EA  + Q+M+ +G+    ++++ L+R L +        
Sbjct: 633 VAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIR-LLNKKKKFSEA 691

Query: 572 YILDDIMANK 581
            +  D M N+
Sbjct: 692 RVFFDKMRNE 701



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 152/509 (29%), Positives = 260/509 (51%), Gaps = 17/509 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++++  G+S S     +V++   R+ L ++A+ +F   RE   K  V  +N +L ALL
Sbjct: 215 LLRRLRQYGLSPSPESCNAVLS---RLPL-DEAIALF---RELPDK-NVCSHNILLKALL 266

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R       +  M      P+V TY  ++   C    ++ A KLL EM  KG   +A 
Sbjct: 267 SAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNAT 323

Query: 137 SYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
            YT++++ +C  GQV +A R L      GV+    V+  +I+G C +  +  A  L  EM
Sbjct: 324 VYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEM 383

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+  + +T++ +I+ LC  G ++ +  +L +M  +G + ++ ++T L+ GY   G  
Sbjct: 384 QKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM 443

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  + N M+     PNVV Y+ L  GLC  G +  A  + ++M       NV TY++L
Sbjct: 444 VEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSL 503

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G  K GNL  A +I   M + G   +V  YT ++  LC++  F +AH+++++M  +  
Sbjct: 504 INGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGI 563

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  T+N  + G C  GRV+   KLL+ M +    PN+ TYN L+        +K   E
Sbjct: 564 KPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTE 623

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +   +    +  N  TYN ++ G C+A  + EA     +M+ +G +L A +++ +I    
Sbjct: 624 IYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLN 683

Query: 492 KQGKVNNAIQLLDRIRGGG-EWNPDIISY 519
           K+ K + A    D++R  G    PD+ S+
Sbjct: 684 KKKKFSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 234/504 (46%), Gaps = 12/504 (2%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +  +D    L +++  + V CS  + +  + S  R+  A Q         E    P V  
Sbjct: 237 RLPLDEAIALFRELPDKNV-CSHNILLKALLSAGRLKDACQHFD------EMSSPPDVVT 289

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++              +   M   G+E N   Y  ++  LC   +V  A ++L +M 
Sbjct: 290 YGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMT 349

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGLCKEHKIE 182
             G A DAV +TT++S  C  G +  AR    E+  R   +    + ALINGLC+  +++
Sbjct: 350 MHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELK 409

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +L EMVD+G+D +V+TY+ +I   C  GN+  +  +  +M  R   PN+ ++T+L 
Sbjct: 410 EADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALS 469

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    G    A++L + M  +G   NV  Y++LI+GLC  G++++A+ +  +ME     
Sbjct: 470 DGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHR 529

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +V TY+ LID   K+G    A  +   M+  G  P++  Y  ++   C +        L
Sbjct: 530 TDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL 589

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +E M  +N  PN VT+N+ +K  C    +    ++   M   E  PN  TYN L+ G  +
Sbjct: 590 LEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCK 649

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
              +KEA     E+ + G++L   +Y+ ++  + +     EA     KM  EG   +   
Sbjct: 650 ARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDV 709

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRI 506
           ++  +     +  + + I L D +
Sbjct: 710 YSFYMDISFNEDNLESTITLCDEL 733



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 183/385 (47%), Gaps = 7/385 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K ++     +L+ M + GV+    VF +VI+ +   G    A ++F  +++ G
Sbjct: 328 VIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRG 387

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      +  +++ L         + +   M   G++ +V TY +L+   CK   +  A+
Sbjct: 388 LAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAF 447

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           ++  EM  +  AP+ V+YT +   +CK G V  A EL     +      V  YN+LINGL
Sbjct: 448 RVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGL 507

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +E+A  ++ EM   G   +V TY+T+I +LC  G  + +  +L +M  +G  P+I
Sbjct: 508 CKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSI 567

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ G+ + GR      L   M+ +   PNVV Y++L+   C + +M     +   
Sbjct: 568 ATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKG 627

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ LI G  KA N+  A      MI  G      +Y+ ++++L +   
Sbjct: 628 MHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKK 687

Query: 356 FHQAHSLIEKMAFE--NCPPNTVTF 378
           F +A    +KM  E     P+  +F
Sbjct: 688 FSEARVFFDKMRNEGLTAEPDVYSF 712



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 143/315 (45%), Gaps = 8/315 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           + GE  E D V   LQ+M  +G+      +  +I+ Y + G   +A ++   +    + P
Sbjct: 404 RAGELKEADRV---LQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAP 460

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  Y  + D L  +      N +   M   G+E NV+TYN L+  LCK   ++ A +++
Sbjct: 461 NVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIM 520

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKE 178
            EM   G   D  +YTT++ ++CK G+ + A  +            ++ YN L+NG C  
Sbjct: 521 TEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMS 580

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            ++E    LL  M+++ + PNV+TY++++   C   N++++  I   M  +   PN +++
Sbjct: 581 GRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTY 640

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
             L+KG+       EA      MI +G      +YS LI  L       EA     +M  
Sbjct: 641 NILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRN 700

Query: 299 NSCPPNVTTYSALID 313
                    YS  +D
Sbjct: 701 EGLTAEPDVYSFYMD 715


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 255/531 (48%), Gaps = 35/531 (6%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL--AENRFSMINPIYSNMKR 93
           VI   RR+G  + A     R+   GL+             L  A  R   ++ +   M  
Sbjct: 105 VIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLRRMPE 164

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN-KG-CAPDAVSYTTIVSSICKLGQV 151
            G +P++F+Y ILLK LC +     A  LL  M + KG C  D V+YTT+          
Sbjct: 165 LGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV---------- 214

Query: 152 EEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
                               INGL +E ++++A+ L   M+DRG  P+V+TYS+IIS+L 
Sbjct: 215 --------------------INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALS 254

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
               ++ +  +  +M   G  P+   +TSL+ GY   G+  EA  ++ +M R G  P+VV
Sbjct: 255 KTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVV 314

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ L+  LC NG   EA  +   + +    P+ TTY  L+ G+A  G L+    + + M
Sbjct: 315 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 374

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +  G       +  ++    ++N   +A  +   M  +   P+ V + T +  LC  GRV
Sbjct: 375 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 434

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D A+   + +K     PNI  +  L+ GL   ++  +  EL  E+   GI L+ + +N I
Sbjct: 435 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAI 494

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +  +C+ G V+EA  L   M+  G + +  T+N +I  YC  GK++ A++LL  +   G 
Sbjct: 495 MGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG- 553

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             P  ++Y +++ G   +G +++    L++M  +G+ P   T+ +L++ LF
Sbjct: 554 VKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLF 604



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 254/531 (47%), Gaps = 18/531 (3%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM---EPNVFTYN 104
            A ++F R+ + G + ++   N  L  +   +    I+ +++ M R G     PN+ TY 
Sbjct: 45  DAHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAIS-LFNRMPRAGATSAAPNIATYG 103

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGC--APDAVSYTTIVSSICKLGQVEEARELAMRF- 161
           I++    +  R+D A+  +  +   G    P+ +  ++    +C  G      ++ +R  
Sbjct: 104 IVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSS-QGPLCTAGGRAMRMDIVLRRM 162

Query: 162 -----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVD-RGIDP-NVITYSTIISSLCDVG 214
                   +  Y  L+ GLC +   ++A  LL  M D +G  P +V+ Y+T+I+ L   G
Sbjct: 163 PELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREG 222

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ +  +   M  RG +P++ +++S++          +A+ ++ RM++ G +P+ + Y+
Sbjct: 223 QLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYT 282

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +L+HG CS+G   EA+ +  +M  +   P+V TY+AL+D   K G    A +I++ ++  
Sbjct: 283 SLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKR 342

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P+   Y  ++          + H L++ M  +        FN  +       +VD A
Sbjct: 343 GHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEA 402

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           + +   M+Q    P+I  Y  +LD L    RV +A      ++  G+  NIV + T++HG
Sbjct: 403 LLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHG 462

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD-RIRGGGEWN 513
           +C      +  +L  +M+  G  LD I FN I+   CK+G+V  A  L D  +R G E  
Sbjct: 463 LCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIE-- 520

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           P+  +Y +L+ G C  G M EA   L  M+  G+ P+  T+N ++     N
Sbjct: 521 PNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQN 571



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 211/434 (48%), Gaps = 7/434 (1%)

Query: 46  AEQALKMFYRIREF-GLKP-TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           ++QAL + + + +  G  P  V  Y  +++ LL E +      ++  M   G  P+V TY
Sbjct: 187 SQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTY 246

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---R 160
           + ++ AL K   +D A ++   M   G  PD + YT++V   C  G+ +EA  +     R
Sbjct: 247 SSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCR 306

Query: 161 FG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G    V  Y AL++ LCK  K  EA  +   +V RG  P+  TY T++      G +  
Sbjct: 307 HGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVE 366

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
              +L  M  +G     H F  ++  Y    +  EA  +++ M ++G  P++V Y T++ 
Sbjct: 367 MHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLD 426

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            LC+ G +D+A+S    ++     PN+  ++ LI G           ++   MI  G   
Sbjct: 427 ILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICL 486

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           + + +  ++  LC+     +A +L + M      PNT T+NT I G C  G++D AMKLL
Sbjct: 487 DTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLL 546

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M      P+  TYN +++G  +  R+++   L+ E++  G+   IVTY  +L G+ +A
Sbjct: 547 GVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQA 606

Query: 459 GMVVEAFQLLGKML 472
           G  V A +L  +M+
Sbjct: 607 GRTVAAKELYLRMI 620



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 195/409 (47%), Gaps = 11/409 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + +VIN   R G  ++A  +F  + + G  P V  Y+ I+ AL           +++ M
Sbjct: 210 AYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRM 269

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            ++G+ P+   Y  L+   C + +   A  +  +M   G  PD V+YT ++  +CK G+ 
Sbjct: 270 VKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKS 329

Query: 152 EEARELAMRFGSGV--------SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
            EAR++   F S V        + Y  L++G   E  + E   LL  M+ +G+      +
Sbjct: 330 TEARKI---FDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 386

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + I+ +      V+ +L +   M  +G NP+I ++ ++L      GR  +A   +N +  
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 446

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           EG  PN+V ++TLIHGLC+    D+   ++++M +     +   ++A++    K G ++ 
Sbjct: 447 EGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 506

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  +++ M+  G  PN   Y  ++   C +    +A  L+  M F    P+ VT+NT I 
Sbjct: 507 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 566

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           G    GR++  + LL +M      P I TY  LL GL +  R   A EL
Sbjct: 567 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 196/412 (47%), Gaps = 5/412 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + ++D    L   M   G S     + S+I++  +    ++A ++F R+ + G
Sbjct: 214 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 273

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P   +Y  ++    +  +      I+  M R G+EP+V TY  L+  LCKN +   A 
Sbjct: 274 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 333

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS--GVSVYNALINGL 175
           K+   +  +G  PD+ +Y T++      G + E  +L    M+ G   G  ++N ++   
Sbjct: 334 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 393

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K +K++EA  +   M  +G++P+++ Y T++  LC  G V+ +L     +   G  PNI
Sbjct: 394 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 453

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             FT+L+ G     +  +  +L   MI  G   + + ++ ++  LC  G + EA ++   
Sbjct: 454 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 513

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ LIDG+   G +  A ++   M+ NG  P+ V Y  ++    QN  
Sbjct: 514 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 573

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
                +L+ +M  +   P  VT+   ++GL   GR   A +L  +M +++ +
Sbjct: 574 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIKWDTV 625


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 282/602 (46%), Gaps = 82/602 (13%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + +++  Y R G    A ++   + +    P     + +L  L +   +     + S M
Sbjct: 173 TYNTLVAGYCREGRLNDARRL---VADMPFAPNSYTNSTLLKGLCSNKEWDDAEELLSEM 229

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G  PN  T+ +++ +LC+N   D A  +L +M    C    + Y  I+S + +LG+V
Sbjct: 230 IRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRV 289

Query: 152 EEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           EEA  L   M     +  YN ++ GLC++ + E+A  L+  MV +   P+ +T++T+IS 
Sbjct: 290 EEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISY 349

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSL---------------------------- 241
           LC  G V+ ++ ++ QM   GC P+  ++++L                            
Sbjct: 350 LCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWKPNTVC 409

Query: 242 ----LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
               LKG     R  +   L   MIR     + V +  +I  LC  G +D    V  +M 
Sbjct: 410 YRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMT 469

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +  C P++  Y++LI+GF++ G++  A +++  M    C  NVV Y  M+K LC+   + 
Sbjct: 470 KFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWE 526

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  L+ +M  + C PN VTF+T I  LC  G V+ A+++ ++M +Y C+PN+  Y+ L+
Sbjct: 527 DAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLI 586

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +GL     V +A +L+ ++     + + + Y+  L G+CRA    +A +L+ +M+ +   
Sbjct: 587 NGLSDQECVDDALKLLNDMP---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCL 643

Query: 478 LDAITFNIIIYAYCKQG-----------------------------------KVNNAIQL 502
            D +TF+I+I   C +G                                   +  +A+QL
Sbjct: 644 PDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQL 703

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           L  +       PD I Y++ L G+C +   ++A   + +M  +    + AT+++L+ SL 
Sbjct: 704 LRNM----PCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLC 759

Query: 563 SN 564
            N
Sbjct: 760 QN 761



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/570 (25%), Positives = 272/570 (47%), Gaps = 54/570 (9%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           D    +L QM      C+ GV +   +I+    +G  E+AL +F    +   KP +  YN
Sbjct: 255 DRAMGVLDQMS--KCRCTRGVIVYNEIISCLAELGRVEEALHLF---DQMPCKPDIFSYN 309

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  + R+     + + M R    P+  T+N ++  LC    VD A +++ +M   
Sbjct: 310 TVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKY 369

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
           GC PD  +Y+ +V+++ + G V++A EL   + +      Y +++ GLC+  + ++   L
Sbjct: 370 GCKPDNFTYSALVNALSERGCVDDALELLRTIPWKPNTVCYRSVLKGLCRADRWDDVGKL 429

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           + EM+   ++ + +T+  II  LC  G V+    +L +M   GC+P+I  + SL+ G+  
Sbjct: 430 VAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSE 489

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   +A +L+  M       NVV Y+ ++ GLC     ++A  +  +M ++ C PN  T
Sbjct: 490 NGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVT 546

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           +S LI    + G +  A +++ +M    C PNV+ Y+ ++  L        A  L+  M 
Sbjct: 547 FSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMP 606

Query: 368 FENCPPNTVTFNTFIKGLCGCGR-----------------------------------VD 392
              C P+T+ ++  +KGLC   R                                   ++
Sbjct: 607 ---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLE 663

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A ++ + M +YEC+PN+  Y+ L++G     R ++A +L+  +     + + + Y+  L
Sbjct: 664 SATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP---CEPDTICYSAAL 720

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+CRA    +A +L+ +M  +   LD  TF+++I + C+ G V+ A ++ +++   G  
Sbjct: 721 KGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYG-C 779

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +P+   ++SL+ G      + E    L  M
Sbjct: 780 SPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 242/459 (52%), Gaps = 24/459 (5%)

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV-YNALINGLCKEH-KIEEAFWL 187
           P AV  T ++  +C  G++++A  +   + R G+  +V  N L+ G C+   ++ +A  +
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERM 159

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           L  +   G   +V+TY+T+++  C  G +  +  ++  M      PN ++ ++LLKG   
Sbjct: 160 LASLALSG-SADVVTYNTLVAGYCREGRLNDARRLVADMPF---APNSYTNSTLLKGLCS 215

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                +A +L + MIR G  PN + +  +IH LC NG  D A+ V  QM +  C   V  
Sbjct: 216 NKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIV 275

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ +I   A+ G +  A  ++++M    C P++ +Y  ++K LC++  +  A +LI  M 
Sbjct: 276 YNEIISCLAELGRVEEALHLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMV 332

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            ++CPP+ VTFNT I  LC  G VD AM++++QM +Y C P+  TY+ L++ L     V 
Sbjct: 333 RKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVD 392

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A EL+  I     + N V Y ++L G+CRA    +  +L+ +M+     LD +TF +II
Sbjct: 393 DALELLRTIP---WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLII 449

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              C++G V+   ++L  +   G  +PDII Y SL+ G   +G + +A    + M  +  
Sbjct: 450 DCLCQKGLVDYGAEVLREMTKFG-CSPDIIIYNSLINGFSENGSVDDALELFKNMSCKR- 507

Query: 548 CPNFATWNVLVRSL-----FSNLGHLGPVYILDDIMANK 581
             N  T+N +++ L     + + G L    + D+ + N+
Sbjct: 508 --NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNE 544



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/574 (27%), Positives = 267/574 (46%), Gaps = 78/574 (13%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK-NNRVDGAY 120
           +P       ++  L A  R      +    +R G   +  T N L+   C+   R+  A 
Sbjct: 99  RPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTA-DAVTRNTLVAGYCRAGGRLADAE 157

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA--MRFGSGVSVYNALINGLCKE 178
           ++L  +   G A D V+Y T+V+  C+ G++ +AR L   M F       + L+ GLC  
Sbjct: 158 RMLASLALSGSA-DVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKGLCSN 216

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF----VRG---- 230
            + ++A  LL EM+  G  PN +T+  II SLC  G  + ++G+L QM      RG    
Sbjct: 217 KEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVY 276

Query: 231 ------------------------CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
                                   C P+I S+ +++KG    GR  +A  L   M+R+  
Sbjct: 277 NEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDC 336

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+ V ++T+I  LC  G +D A+ V  QM +  C P+  TYSAL++  ++ G +  A +
Sbjct: 337 PPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALE 396

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +  R I     PN V Y  ++K LC+ + +     L+ +M       + VTF   I  LC
Sbjct: 397 LL-RTIP--WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLC 453

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G VD+  ++L +M ++ C P+I  YN L++G      V +A EL   +     + N+V
Sbjct: 454 QKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVV 510

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR- 505
           TYN +L G+CRA    +A +L+ +M+ +    + +TF+ +I   C++G V  AI++ ++ 
Sbjct: 511 TYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKM 570

Query: 506 ---------------IRGGGEW---------------NPDIISYTSLLWGICNSGGMQEA 535
                          I G  +                 PD I Y++ L G+C +   ++A
Sbjct: 571 PKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDA 630

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
              + +M+ +   P+  T+++L+    +NL H G
Sbjct: 631 GELILEMIRKNCLPDEVTFSILI----NNLCHKG 660



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 150/540 (27%), Positives = 255/540 (47%), Gaps = 84/540 (15%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA-------------------- 132
           RD   P      +L+K LC   R+D A ++L      G A                    
Sbjct: 95  RDPERPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLA 154

Query: 133 --------------PDAVSYTTIVSSICKLGQVEEARELA--MRFGSGVSVYNALINGLC 176
                          D V+Y T+V+  C+ G++ +AR L   M F       + L+ GLC
Sbjct: 155 DAERMLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKGLC 214

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF----VRG-- 230
              + ++A  LL EM+  G  PN +T+  II SLC  G  + ++G+L QM      RG  
Sbjct: 215 SNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVI 274

Query: 231 --------------------------CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
                                     C P+I S+ +++KG    GR  +A  L   M+R+
Sbjct: 275 VYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRK 334

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
              P+ V ++T+I  LC  G +D A+ V  QM +  C P+  TYSAL++  ++ G +  A
Sbjct: 335 DCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDA 394

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++  R I     PN V Y  ++K LC+ + +     L+ +M       + VTF   I  
Sbjct: 395 LELL-RTIP--WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDC 451

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC  G VD+  ++L +M ++ C P+I  YN L++G      V +A EL   +     + N
Sbjct: 452 LCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRN 508

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +VTYN +L G+CRA    +A +L+ +M+ +    + +TF+ +I   C++G V  AI++ +
Sbjct: 509 VVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFE 568

Query: 505 RIRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
           ++    ++N  P++I Y++L+ G+ +   + +A     K+LN+  C P+   ++  ++ L
Sbjct: 569 KM---PKYNCMPNVIIYSTLINGLSDQECVDDAL----KLLNDMPCKPDTICYSAALKGL 621



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 226/463 (48%), Gaps = 11/463 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +++QM   G       + +++N+    G  + AL++   +R    KP    Y  
Sbjct: 356 VDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALEL---LRTIPWKPNTVCYRS 412

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L   +R+  +  + + M R+ +  +  T+ +++  LC+   VD   ++L EM   G
Sbjct: 413 VLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFG 472

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           C+PD + Y ++++   + G V++A EL   M     V  YN ++ GLC+  + E+A  L+
Sbjct: 473 CSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLV 532

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EMV     PN +T+ST+IS LC  G VE ++ +  +M    C PN+  +++L+ G    
Sbjct: 533 AEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQ 592

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               +A  L N M  +   P+ + YS  + GLC     ++A  +  +M   +C P+  T+
Sbjct: 593 ECVDDALKLLNDMPCK---PDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTF 649

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S LI+     G L  A+++   M+   C PNV  Y+ ++    +      A  L+  M  
Sbjct: 650 SILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMP- 708

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
             C P+T+ ++  +KGLC   R + A +L+ +M + +C  +  T++ L+  L +   V  
Sbjct: 709 --CEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIGSLCQNGLVDM 766

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           A E+  ++   G   N   ++++++G      V E  +LL  M
Sbjct: 767 ATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 149/313 (47%), Gaps = 37/313 (11%)

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +R+   P  V  + LI  LC+ G +D+A  V     E +   +  T + L+ G+ +AG  
Sbjct: 94  MRDPERPAAVPCTLLIKKLCAAGRLDDAERV-LGASERAGTADAVTRNTLVAGYCRAGGR 152

Query: 322 LGASQ---------------IWNRMISNGC-----------------SPNVVAYTCMVKV 349
           L  ++                +N +++  C                 +PN    + ++K 
Sbjct: 153 LADAERMLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKG 212

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC N  +  A  L+ +M    CPPN +TF   I  LC  G  D AM +LDQM +  C   
Sbjct: 213 LCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRG 272

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +  YNE++  L  + RV+EA  L  ++     + +I +YNT++ G+CR G   +A  L+ 
Sbjct: 273 VIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIA 329

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M+ +    D +TFN +I   C +G V+ A+++++++   G   PD  +Y++L+  +   
Sbjct: 330 GMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYG-CKPDNFTYSALVNALSER 388

Query: 530 GGMQEAFIYLQKM 542
           G + +A   L+ +
Sbjct: 389 GCVDDALELLRTI 401


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/516 (28%), Positives = 265/516 (51%), Gaps = 29/516 (5%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F+R+ +    P++  +  IL  +     ++    +Y+ M+  G+ P   T+NIL
Sbjct: 36  DDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNIL 95

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRF 161
           +   C   ++D A+ ++ ++   GC P+ V++TT++   C   ++ +A       +A R 
Sbjct: 96  INCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRI 155

Query: 162 GSGVSVYNALINGLCKEH--KIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVET 218
                +Y  LINGLCK    K   A  LL +M +R  + PN+I Y+T++  LC  GN+  
Sbjct: 156 RFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINE 215

Query: 219 SLGILGQMFVRGCNPNIHSF----------------TSLLKGYLLGGRTHEASDLWNRMI 262
           +  +  +M V+G  P+I ++                TSLL G+ L  +  EA +L+N MI
Sbjct: 216 ARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMI 275

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             G   +++ Y+ L++G C N  + EA  + + M E    P+  TY+ L+ G+     + 
Sbjct: 276 ERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVD 335

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  +++ MI  G  P+V +Y  ++K  C+     +A +L+E M  +N  PN +T+N+ +
Sbjct: 336 EARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVV 395

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECL--PNITTYNELLDGLLRVNRVKEAFELVTE-IEKC 439
            GLC  G +  A KL+D+M  Y C   P++TTYN LL+ L R+  V++A       I + 
Sbjct: 396 DGLCKSGGILDAWKLVDEM-HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFER 454

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
               N+ +YN ++ G C+   + EA  L   M  +    D +T+NI++ A     +++ A
Sbjct: 455 SFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKA 514

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           I LL +I   G  +P++ +Y  L+ G+   G  + A
Sbjct: 515 IALLVQIVDQG-ISPNLRTYNILINGLHKGGRPKTA 549



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 253/532 (47%), Gaps = 48/532 (9%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           RR+ L  Q L           + T K ++ I DA+   +R   ++P+          P++
Sbjct: 15  RRIHLHSQPLPS---------QSTCK-FDSIDDAVALFHRMVDMHPL----------PSI 54

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-- 158
             +  +L  + K      A  L   M  KG  P  V++  +++  C +GQ++ A  +   
Sbjct: 55  VEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGK 114

Query: 159 -MRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD--V 213
            +++G    V  +  L+ G C   K+ +A ++  EMV R I  + + Y T+I+ LC   +
Sbjct: 115 ILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKI 174

Query: 214 GNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           G    ++ +L +M  R    PN+  + +++ G    G  +EA  L ++MI +G  P++  
Sbjct: 175 GKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFT 234

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS+LI+GLC  G   E  S                   L++GF     +  A +++N MI
Sbjct: 235 YSSLIYGLCRAGQRKEVTS-------------------LLNGFCLNNKVDEARELFNVMI 275

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   +++ Y  ++   C NN   +A  L   M      P+T+T+   + G C   +VD
Sbjct: 276 ERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVD 335

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  L   M +   +P++ +YN L+ G  +  RV EA  L+ ++    +  NI+TYN+++
Sbjct: 336 EARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVV 395

Query: 453 HGVCRAGMVVEAFQLLGKM-LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
            G+C++G +++A++L+ +M        D  T+NI++ + C+   V  AI     +     
Sbjct: 396 DGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERS 455

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + P++ SY  L+ G C +  + EA      M  + + P+  T+N+L+ +LF+
Sbjct: 456 FAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFN 507



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 243/502 (48%), Gaps = 32/502 (6%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M+ +GV      F  +IN +  +G  + A  +  +I ++G +P V  +  ++      ++
Sbjct: 80  MEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDK 139

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN--RVDGAYKLLVEMGNKG-CAPDAVS 137
                 IY  M    +  +   Y  L+  LCK+   +   A +LL +M  +    P+ + 
Sbjct: 140 MLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIM 199

Query: 138 YTTIVSSICKLGQVEEARELAMR----------FGSGVSVY-----------NALINGLC 176
           Y T+V  +CK G + EAR L  +          F     +Y            +L+NG C
Sbjct: 200 YNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFC 259

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
             +K++EA  L   M++RG   ++I Y+ +++  C    V  +  +   M  RG  P+  
Sbjct: 260 LNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTI 319

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++T L+ GY L  +  EA +L++ MI  G +P+V +Y+ LI G C    + EA+++   M
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC---SPNVVAYTCMVKVLCQN 353
              +  PN+ TY++++DG  K+G +L A ++ + M  + C    P+V  Y  +++ LC+ 
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEM--HYCCQPPPDVTTYNILLESLCRI 437

Query: 354 NMFHQAHSLIEKMAFENC-PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               +A +  + + FE    PN  ++N  I G C   R+D A+ L + M     +P+I T
Sbjct: 438 ECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVT 497

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN LLD L    ++ +A  L+ +I   GI  N+ TYN +++G+ + G    A ++   + 
Sbjct: 498 YNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLS 557

Query: 473 IEGTKLDAITFNIIIYAYCKQG 494
           I G   D  T+  II   CK G
Sbjct: 558 IRGYHPDVKTY--IINELCKGG 577



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 190/390 (48%), Gaps = 22/390 (5%)

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE-ASDLWNRMIREGF 266
            S C   +++ ++ +  +M      P+I  FT +L G +   R +  A DL+  M  +G 
Sbjct: 27  QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKIL-GTIAKMRYYATAIDLYTLMEYKGV 85

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P  V ++ LI+  C  G MD A SV  ++ +  C PNV T++ L+ GF     +L A  
Sbjct: 86  VPFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALY 145

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNM--FHQAHSLIEKMAFEN-CPPNTVTFNTFIK 383
           I++ M++     + V Y  ++  LC++ +     A  L++KM       PN + +NT + 
Sbjct: 146 IYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVH 205

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV----------------NRVK 427
           GLC  G ++ A  L  +M      P+I TY+ L+ GL R                 N+V 
Sbjct: 206 GLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVD 265

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA EL   + + G Q +I+ YN +++G C    V EA +L   M+  G + D IT+ I++
Sbjct: 266 EARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILM 325

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
           + YC   KV+ A  L   +   G   PD+ SY  L+ G C    + EA   L+ M  + +
Sbjct: 326 HGYCLIDKVDEARNLFHGMIERG-LVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNL 384

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
            PN  T+N +V  L  + G L    ++D++
Sbjct: 385 VPNIITYNSVVDGLCKSGGILDAWKLVDEM 414



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 11/276 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M   G       +  +++ Y  +   ++A  +F+ + E GL P V  YN ++    
Sbjct: 305 LFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYC 364

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC--APD 134
              R      +  +M    + PN+ TYN ++  LCK+  +  A+KL+ EM +  C   PD
Sbjct: 365 KFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEM-HYCCQPPPD 423

Query: 135 AVSYTTIVSSICKLGQVEEA----RELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLL 188
             +Y  ++ S+C++  VE+A    + L     F   V  YN LI+G CK  +++EA  L 
Sbjct: 424 VTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLF 483

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M  + + P+++TY+ ++ +L +   ++ ++ +L Q+  +G +PN+ ++  L+ G   G
Sbjct: 484 NHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKG 543

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           GR   A  +   +   G+ P+V  Y  +I+ LC  G
Sbjct: 544 GRPKTAQKISLYLSIRGYHPDVKTY--IINELCKGG 577



 Score = 40.4 bits (93), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
              C+   + +A  L  +M+        + F  I+    K      AI L   +   G  
Sbjct: 27  QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVV 86

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P  +++  L+   C+ G M  AF  + K+L  G  PN  T+  L++    N   L  +Y
Sbjct: 87  -PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALY 145

Query: 573 ILDDIMANK 581
           I D+++A +
Sbjct: 146 IYDEMVARR 154


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/553 (26%), Positives = 264/553 (47%), Gaps = 10/553 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  M+  G+S     + +++N++ R G+  +A  +  R++  G+ PT   YN ++ A   
Sbjct: 231 LSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFAR 290

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA-PDAV 136
                    +  +M   G EP++ TYN+L   LC+  +VD A++L  EM   G A PD V
Sbjct: 291 LGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVV 350

Query: 137 SYTTIVSSICK-------LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +Y T+V +  K       L  +EE R+  ++    +  +N ++  LCKE K+EEA   L 
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDKGVK--PTLVTHNIVVKSLCKEGKLEEALGKLE 408

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           ++ + G+ P+VITY+T+I + C  GNV  +  ++ +M  +G   +  +  ++L       
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK 468

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A +L +   + GF+P+ V+Y T++       + + A+ +  QM E    P+++TY+
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYN 528

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI G  +   L  A    N  +  G  P+   Y  ++   C+      A     KM   
Sbjct: 529 TLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN 588

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           +  P+ VT NT + GLC  G++D A+KL +   +     ++ TYN L+  + +V  V  A
Sbjct: 589 SFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTA 648

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                ++E  G+Q +  TYN +L  +  AG   EA  +L K+   G    +    ++  +
Sbjct: 649 LHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPS 708

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
              +  V       +        +  + +Y   L G+C  G ++EA   L +M+ +G+  
Sbjct: 709 SADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPV 768

Query: 550 NFATWNVLVRSLF 562
           + +T+  L+  L 
Sbjct: 769 DCSTYITLMEGLI 781



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/521 (24%), Positives = 237/521 (45%), Gaps = 77/521 (14%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL +MK +G++ ++  + ++++++ R+G  +QA K+   +  +G +P ++ YN +  
Sbjct: 262 ARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAM 321

Query: 74  ALLAENRFSMINPIYSNMKRDGME-PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
            L    +      +   M+R G   P+V TYN L+ A  K      A +LL EM +KG  
Sbjct: 322 GLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVK 381

Query: 133 PDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWL 187
           P  V++  +V S+CK G++EEA     ++A       V  YN LI+  CK   + +AF L
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVG--------------------------------- 214
           + EMV +G+  +  T +T++ +LC +                                  
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501

Query: 215 --NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
             N E +L +  QM  R   P+I ++ +L+KG     R  EA D  N  + +G +P+   
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETT 561

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ +IH  C  G ++ A     +M ENS  P+V T + L++G    G L  A +++   +
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   +V+ Y  +++ +C+      A    + M  +   P+  T+N  +  L   GR +
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681

Query: 393 WAMKLLDQM-------------------------KQYECLPN-----------ITTYNEL 416
            A  +L ++                         K++E  P            + TY E 
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           L+GL    ++KEA  ++ E+ + G+ ++  TY T++ G+ +
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 202/424 (47%), Gaps = 7/424 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +C  D ++ LL++M+ +GV  +      V+ S  + G  E+AL    +I E GL P V  
Sbjct: 363 RCSSDALR-LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVIT 421

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++DA       +    +   M   G++ + FT N +L  LCK  R + A +LL    
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
            +G  PD VSY T++++  K    E A  L       +    +S YN LI GLC+  +++
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA   L E V++G+ P+  TY+ II + C  G++E +     +M      P++ +  +L+
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G  L G+  +A  L+   + +G   +V+ Y+TLI  +C  G +D A+     ME     
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  TY+ ++   ++AG    A  + +++  +G      A   +           +    
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGK 721

Query: 363 IEKMAFENCPPNTV-TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            E  + E    N + T+   + GLC  G++  A  +LD+M Q     + +TY  L++GL+
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLI 781

Query: 422 RVNR 425
           +  +
Sbjct: 782 KRQK 785



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 198/395 (50%), Gaps = 4/395 (1%)

Query: 169 NALINGLCKEHKI--EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           NA+++ L +      + +  +   +++  + PN  T++ ++ + C  G +  +L  L  M
Sbjct: 175 NAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTM 234

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              G +P+  ++ +LL  +   G   EA  L  RM R+G  P    Y+TL+      G +
Sbjct: 235 QGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWI 294

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS-PNVVAYTC 345
            +A  V   M      P++ TY+ L  G  +AG +  A ++ + M   G + P+VV Y  
Sbjct: 295 KQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNT 354

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V    +      A  L+E+M  +   P  VT N  +K LC  G+++ A+  L+++ +  
Sbjct: 355 LVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG 414

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P++ TYN L+D   +   V +AF L+ E+   G++++  T NT+L+ +C+     +A 
Sbjct: 415 LAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAE 474

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +LL      G   D +++  ++ AY K+     A++L D++    +  P I +Y +L+ G
Sbjct: 475 ELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMI-ERKLIPSISTYNTLIKG 533

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +C    ++EA   L + + +G+ P+  T+N+++ +
Sbjct: 534 LCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 171/356 (48%), Gaps = 4/356 (1%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRT-HEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
           RG  P++ +  ++L        T  +AS D++  +I     PN   ++ L+H  CS G++
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            +A++    M+     P+  TY+ L++   + G L  A  +  RM  +G +P    Y  +
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY-E 405
           V    +     QA  ++E M      P+  T+N    GLC  G+VD A +L D+M++   
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGT 344

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            LP++ TYN L+D   +     +A  L+ E+   G++  +VT+N ++  +C+ G + EA 
Sbjct: 345 ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
             L K+  EG   D IT+N +I AYCK G V  A  L+D + G G    D  +  ++L+ 
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG-LKMDTFTLNTVLYN 463

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +C     ++A   L      G  P+  ++  ++ + F        + + D ++  K
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 161/314 (51%), Gaps = 5/314 (1%)

Query: 252 HEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSM--DEAVSVSYQMEENSCPPNVTTY 308
           H A+ L + + R  G  P++ A + ++  L  + S     ++ V   + E    PN  T+
Sbjct: 152 HLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTF 211

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + L+      G L  A    + M   G SP+ V Y  ++   C+  M  +A +L+ +M  
Sbjct: 212 NLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKR 271

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P   T+NT +      G +  A K+++ M  Y   P++ TYN L  GL +  +V E
Sbjct: 272 DGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDE 331

Query: 429 AFELVTEIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           AF L  E+E+ G  L ++VTYNT++    +     +A +LL +M  +G K   +T NI++
Sbjct: 332 AFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVV 391

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            + CK+GK+  A+  L++I   G   PD+I+Y +L+   C +G + +AF  + +M+ +G+
Sbjct: 392 KSLCKEGKLEEALGKLEKIAEEG-LAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450

Query: 548 CPNFATWNVLVRSL 561
             +  T N ++ +L
Sbjct: 451 KMDTFTLNTVLYNL 464


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 210/395 (53%), Gaps = 5/395 (1%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  +N LINGLC E ++ EA  L+ +MV +G+  +V+TY TI++ +C +G+ +++L +L 
Sbjct: 10  VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 69

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M      P++  +++++      G   +A  L++ M+ +G  PNV  Y+ +I G CS G
Sbjct: 70  KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 129

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
              +A  +   M E    P+V T++ALI    K G L  A ++ + M+     P+ V Y 
Sbjct: 130 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 189

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            M+   C++N F  A  + + MA     P+ VTFNT I   C   RVD  M+LL ++ + 
Sbjct: 190 SMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 245

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             + N TTYN L+ G   V+ +  A +L  E+   G+  + +T N +L+G C    + EA
Sbjct: 246 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 305

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +L   + +    LD + +NIII+  CK  KV+ A  L   +   G   PD+ +Y  ++ 
Sbjct: 306 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHG-VEPDVQTYNVMIS 364

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           G C    + +A +   KM + G  P+ +T+N L+R
Sbjct: 365 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 399



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 216/421 (51%), Gaps = 9/421 (2%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P V T+N L+  LC   RV  A  L+ +M  KG   D V+Y TIV+ +CK+G  + A
Sbjct: 5   GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64

Query: 155 RELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L  +         V +Y+A+I+ LCK+    +A +L  EM+++GI PNV TY+ +I  
Sbjct: 65  LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  G    +  +L  M  R  NP++ +F +L+   +  G+  EA  L + M+     P+
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            V Y+++I+G C +   D+A      M +    P+V T++ +ID + +A  +    Q+  
Sbjct: 185 TVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLR 240

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            +   G   N   Y  ++   C+ +  + A  L ++M      P+T+T N  + G C   
Sbjct: 241 EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENE 300

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           +++ A++L + ++  +   +   YN ++ G+ + ++V EA++L   +   G++ ++ TYN
Sbjct: 301 KLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 360

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++ G C    + +A  L  KM   G + D  T+N +I    K G+++ +I+L+  +R  
Sbjct: 361 VMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN 420

Query: 510 G 510
           G
Sbjct: 421 G 421



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 194/368 (52%), Gaps = 5/368 (1%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV+ G+ P VIT++T+I+ LC  G V  +  ++ +M  +G + ++ ++ +++ G    G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
           T  A +L ++M      P+VV YS +I  LC +G   +A  +  +M E    PNV TY+ 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF   G    A ++   MI    +P+V+ +  ++    +     +A  L ++M    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+TVT+N+ I G C   R D A  + D M      P++ T+N ++D   R  RV E  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L+ EI + G+  N  TYNT++HG C    +  A  L  +M+  G   D IT NI++Y +
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C+  K+  A++L + I+   + + D ++Y  ++ G+C    + EA+     +   G+ P+
Sbjct: 297 CENEKLEEALELFEVIQ-MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 355

Query: 551 FATWNVLV 558
             T+NV++
Sbjct: 356 VQTYNVMI 363



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 196/393 (49%), Gaps = 11/393 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M  +G+      + +++N   ++G  + AL +  ++ E  +KP V IY+ I+D L 
Sbjct: 32  LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   S    ++S M   G+ PNVFTYN ++   C   R   A +LL +M  +   PD +
Sbjct: 92  KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 151

Query: 137 SYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++  ++S+  K G++ EA +L         F   V+ YN++I G CK ++ ++A      
Sbjct: 152 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDAK----H 206

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M D    P+V+T++TII   C    V+  + +L ++  RG   N  ++ +L+ G+     
Sbjct: 207 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 266

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            + A DL+  MI  G  P+ +  + L++G C N  ++EA+ +   ++ +    +   Y+ 
Sbjct: 267 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 326

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I G  K   +  A  ++  +  +G  P+V  Y  M+   C  +    A+ L  KM    
Sbjct: 327 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 386

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             P+  T+NT I+G    G +D +++L+ +M+ 
Sbjct: 387 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 419



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 192/425 (45%), Gaps = 9/425 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F ++IN     G   +A  +  ++   GL   V  Y  I++ +           + S M
Sbjct: 12  TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 71

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           +   ++P+V  Y+ ++  LCK+     A  L  EM  KG AP+  +Y  ++   C  G+ 
Sbjct: 72  EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 131

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +A+ L            V  +NALI+   KE K+ EA  L  EM+ R I P+ +TY+++
Sbjct: 132 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 191

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C     + +      MF    +P++ +F +++  Y    R  E   L   + R G 
Sbjct: 192 IYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 247

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           + N   Y+TLIHG C   +++ A  +  +M  +   P+  T + L+ GF +   L  A +
Sbjct: 248 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 307

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  +  +    + VAY  ++  +C+ +   +A  L   +      P+  T+N  I G C
Sbjct: 308 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 367

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
           G   +  A  L  +MK     P+ +TYN L+ G L+   + ++ EL++E+   G   +  
Sbjct: 368 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 427

Query: 447 TYNTI 451
           T   +
Sbjct: 428 TIKMV 432



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 153/304 (50%), Gaps = 5/304 (1%)

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+  G  P V+ ++TLI+GLC  G + EA ++  +M       +V TY  +++G  K G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A  + ++M      P+VV Y+ ++  LC++     A  L  +M  +   PN  T+N 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G C  GR   A +LL  M + E  P++ T+N L+   ++  ++ EA +L  E+    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I  + VTYN++++G C+     +A  +   M       D +TFN II  YC+  +V+  +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGM 236

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           QLL  I   G    +  +Y +L+ G C    +  A    Q+M++ G+CP+  T N+L+  
Sbjct: 237 QLLREISRRG-LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295

Query: 561 LFSN 564
              N
Sbjct: 296 FCEN 299



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 169/342 (49%), Gaps = 9/342 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +       QYL  +M  +G++ +   +  +I+ +   G    A ++   + E  
Sbjct: 86  IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 145

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +N ++ A + E +      +   M    + P+  TYN ++   CK+NR D A 
Sbjct: 146 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 205

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +   M     +PD V++ TI+   C+  +V+E     RE++ R   +  + YN LI+G 
Sbjct: 206 HMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 261

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+   +  A  L  EM+  G+ P+ IT + ++   C+   +E +L +   + +   + + 
Sbjct: 262 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 321

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G   G +  EA DL+  +   G  P+V  Y+ +I G C   ++ +A  + ++
Sbjct: 322 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 381

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           M++N   P+ +TY+ LI G  KAG +  + ++ + M SNG S
Sbjct: 382 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 423



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 18/319 (5%)

Query: 9   CEIDG---------VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           C IDG          Q LL+ M    ++     F ++I++  + G   +A K+   +   
Sbjct: 120 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            + P    YN ++      NRF     ++  M      P+V T+N ++   C+  RVD  
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 235

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALING 174
            +LL E+  +G   +  +Y T++   C++  +  A++L     S GV       N L+ G
Sbjct: 236 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 295

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+  K+EEA  L   +    ID + + Y+ II  +C    V+ +  +   + + G  P+
Sbjct: 296 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 355

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++  ++ G+       +A+ L+++M   G  P+   Y+TLI G    G +D+++ +  
Sbjct: 356 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 415

Query: 295 QMEENSCPPNVTTYSALID 313
           +M  N    +  T   + D
Sbjct: 416 EMRSNGFSGDAFTIKMVAD 434



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 6/143 (4%)

Query: 3   EKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLK 62
           EKL E  E      L + +++  +      +  +I+   +    ++A  +F  +   G++
Sbjct: 300 EKLEEALE------LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE 353

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V+ YN ++     ++  S  N ++  MK +G EP+  TYN L++   K   +D + +L
Sbjct: 354 PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIEL 413

Query: 123 LVEMGNKGCAPDAVSYTTIVSSI 145
           + EM + G + DA +   +   I
Sbjct: 414 ISEMRSNGFSGDAFTIKMVADLI 436



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           ITFN +I   C +G+V  A  L++++ G G  + D+++Y +++ G+C  G  + A   L 
Sbjct: 11  ITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLS 69

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           KM    I P+   ++ ++  L  +  H    Y+  +++
Sbjct: 70  KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 107


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/571 (25%), Positives = 277/571 (48%), Gaps = 17/571 (2%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
           E V  S  V   +I  +    +   A  +F + ++ G++  +   N +L  L   ++   
Sbjct: 109 ECVGRSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEA 168

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCK-----NNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +  ++ ++K  G  PNV+TY I++   CK     N  ++ A  +L EM  KG  P  V+Y
Sbjct: 169 VRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTY 228

Query: 139 TTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVD 193
              +  +C++G +E+A        S      +  YNALI G C++ + +EA  LL EM D
Sbjct: 229 GVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKD 288

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN--PNIHSFTSLLKGYLLGGRT 251
            GI P++ +YS ++++ C  G++E+ + ++ +M    CN  P +   TS+L G    G  
Sbjct: 289 EGISPDIYSYSILVNAFCTEGDIESGMNLIQEM--EHCNKKPPLVCCTSVLMGLRTKGLV 346

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++  + ++ +  +G+  ++++YSTLIHG     ++  A ++ ++M +N   P+   Y +L
Sbjct: 347 NDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISL 406

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I  + + G L  A + +  M+ +G  P+++    +V   C    F +A   I +M  +N 
Sbjct: 407 IREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNI 466

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR-VNRVKEAF 430
            PN+ T++  I  LC    V+ A ++L  M +    P++  Y  ++DG  +      +A+
Sbjct: 467 LPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAW 526

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  ++ K G + + VT   ++    + G + +A  L  +M  EG   D   F  II  Y
Sbjct: 527 KLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGY 586

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           C+ G V  A  +  +++      P++ +YT L+ G C    +  A + +  M    + P+
Sbjct: 587 CRVGNVKRAWSMYKKMKRNN-VTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPD 645

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             T+  L+   +  + ++   Y + D M  K
Sbjct: 646 VKTYTALIAG-YQRIENIDRAYEVFDEMKKK 675



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 242/528 (45%), Gaps = 52/528 (9%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY--RRVGL---AEQALKMFYRIREF 59
           L E  +++ V+ L   +K  G S +   +  +IN Y   R G     EQA  +   + E 
Sbjct: 160 LAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEK 219

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMK--RDGMEP-NVFTYNILLKALCKNNRV 116
           G  PTV  Y   +  L    R   I   ++ ++  R   +P N++ YN L++  C+  R 
Sbjct: 220 GENPTVVTYGVYIHGLC---RVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRP 276

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL------------------- 157
           D A KLL EM ++G +PD  SY+ +V++ C  G +E    L                   
Sbjct: 277 DEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSV 336

Query: 158 ---------------------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
                                A  +   +  Y+ LI+G  K H ++ A  L+ EM   G+
Sbjct: 337 LMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGL 396

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+ I Y ++I   C  G ++ +L     M   G  P+I +   ++  Y   G+  EA  
Sbjct: 397 VPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALI 456

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
             N+M  +  LPN   YS +I+ LC   ++++A  V   M +++  P+V  Y+ ++DG+A
Sbjct: 457 YINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYA 516

Query: 317 KA-GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
           K   N + A +++ +M   GC P+ V  T +V +  +     +A +L ++MA E    + 
Sbjct: 517 KQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDE 576

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
             F   I G C  G V  A  +  +MK+    PN+ TY  L+DG  ++ R+  A  L+ +
Sbjct: 577 FAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDD 636

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           +++  +  ++ TY  ++ G  R   +  A+++  +M  +GT  D I +
Sbjct: 637 MKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAY 684



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 75/141 (53%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++   ++ ++     L ++M  EG+S  E  F ++I+ Y RVG  ++A  M+ +++   
Sbjct: 547 LVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNN 606

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P VK Y  ++D      R  M   +  +MKR+ + P+V TY  L+    +   +D AY
Sbjct: 607 VTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAY 666

Query: 121 KLLVEMGNKGCAPDAVSYTTI 141
           ++  EM  KG  PD ++Y T+
Sbjct: 667 EVFDEMKKKGTLPDHIAYLTL 687


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 250/531 (47%), Gaps = 8/531 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP-NVF 101
           +G      + F  +   G +P    +N  + A +A         +   M RDG  P N F
Sbjct: 5   LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
           +YN+++  + +  R   A ++  EM  +   P+ ++Y T++    K G +E    L  + 
Sbjct: 65  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124

Query: 161 ----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      YN L++GLC+  ++ E   LL EM  + + P+  TYS +   L   G+ 
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +  L + G+    G     ++ + LL G    G+   A ++   ++  G +P  V Y+TL
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+G C  G ++ A S   QM+     P+  TY+ALI+G  KA  +  A  +   M  NG 
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 304

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P V  +  ++    +     +   ++ +M      PN V++ + +   C  G++  A+ 
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 364

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +LD M   + LPN   YN ++D  +      +AF LV +++  GI  +IVTYN ++ G+C
Sbjct: 365 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 424

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
               + EA +++  +       DA+++N +I A C +G ++ A+ L  R+   G     +
Sbjct: 425 NQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG-IKSTV 483

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
            +Y  L+ G+  +G + E     QKM+   + P+ A  N++V + +S  G+
Sbjct: 484 RTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA-YSKYGN 533



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 229/497 (46%), Gaps = 41/497 (8%)

Query: 17  LLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L++M  +G        +  VI    R G    A+++F  + E  + P    YN ++D  
Sbjct: 49  MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 108

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +          +   M   G++PN  TYN+LL  LC+  R+     LL EM ++   PD 
Sbjct: 109 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 168

Query: 136 VSYTTI-----------------------------------VSSICKLGQVEEARELAMR 160
            +Y+ +                                   ++ +CK G+V  A E+   
Sbjct: 169 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 228

Query: 161 F-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              +G+     +YN LING C+  ++E AF    +M  R I P+ ITY+ +I+ LC    
Sbjct: 229 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 288

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  +  +L +M   G NP + +F +L+  Y   G+  +   + + M   G  PNVV+Y +
Sbjct: 289 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 348

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++  C NG + EAV++   M      PN   Y+A+ID + + G    A  +  +M SNG
Sbjct: 349 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 408

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            SP++V Y  ++K LC  +   +A  +I  ++     P+ V++NT I   C  G +D A+
Sbjct: 409 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 468

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L  +M +Y     + TY++L+ GL    R+ E   L  ++ +  +  +   +N ++   
Sbjct: 469 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 528

Query: 456 CRAGMVVEAFQLLGKML 472
            + G  ++A  L  +ML
Sbjct: 529 SKYGNEIKAEDLRKEML 545



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 181/370 (48%), Gaps = 5/370 (1%)

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           SL    +V  + GIL      G  P+  ++   ++  +  G   EA  +  RM R+G  P
Sbjct: 4   SLGRHADVRRAFGILASA---GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60

Query: 269 -NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            N  +Y+ +I G+   G   +AV V  +M E +  PN  TY+ +IDG  K G+L    ++
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            ++M+ +G  PN + Y  ++  LC+     +  +L+++MA +   P+  T++    GL  
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G     + L  +  +        T + LL+GL +  +V  A E++  +   G+    V 
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YNT+++G C+ G +  AF   G+M     K D IT+N +I   CK  ++ NA  LL  ++
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
             G  NP + ++ +L+     +G +++ FI L +M   G+ PN  ++  +V +   N   
Sbjct: 301 DNG-VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 568 LGPVYILDDI 577
              V ILDD+
Sbjct: 360 PEAVAILDDM 369



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 179/392 (45%), Gaps = 5/392 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M  + +      +  + +   R G ++  L +F +  + G+       + +L+ L 
Sbjct: 155 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 214

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + + S+   +  ++   G+ P    YN L+   C+   ++GA+    +M ++   PD +
Sbjct: 215 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 274

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +CK  ++  A++L M          V  +N LI+   +  ++E+ F +L EM
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G+ PNV++Y +I+++ C  G +  ++ IL  MF +   PN   + +++  Y+  G  
Sbjct: 335 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 394

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L  +M   G  P++V Y+ LI GLC+   + EA  +   +  +   P+  +Y+ L
Sbjct: 395 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 454

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I      GN+  A  +  RM   G    V  Y  ++  L      ++   L +KM   N 
Sbjct: 455 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 514

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            P+    N  ++     G    A  L  +M Q
Sbjct: 515 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 147/292 (50%), Gaps = 5/292 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++G      QMK   +      + ++IN   +      A  +   +++ G+ PTV+ +N
Sbjct: 253 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 312

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA     +      + S M+ +G++PNV +Y  ++ A CKN ++  A  +L +M +K
Sbjct: 313 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 372

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
              P+A  Y  I+ +  + G  ++A  L  +  S G+S     YN LI GLC + +I EA
Sbjct: 373 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 432

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             ++  + +  + P+ ++Y+T+IS+ C  GN++ +L +  +M   G    + ++  L+ G
Sbjct: 433 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 492

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
               GR +E   L+ +M++   +P+   ++ ++      G+  +A  +  +M
Sbjct: 493 LGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 5/269 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   I   Q LL +M+  GV+ +   F ++I++Y R G  E+   +   ++E G
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 338

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y  I++A     +      I  +M    + PN   YN ++ A  ++   D A+
Sbjct: 339 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
            L+ +M + G +P  V+Y  ++  +C   Q+ EA E+       R       YN LI+  
Sbjct: 399 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 458

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I++A  L   M   GI   V TY  +IS L   G +     +  +M      P+ 
Sbjct: 459 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN 518

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
                +++ Y   G   +A DL   M+++
Sbjct: 519 AIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/573 (25%), Positives = 267/573 (46%), Gaps = 61/573 (10%)

Query: 49  ALKMFYRIREFG-LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +L  F  +R  G   P   +YN +L A L E+R  ++  +Y ++   G  P+VFT N LL
Sbjct: 91  SLSAFRSLRALGGAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALL 150

Query: 108 KALCKNNRVDGAYKLLVEMGNK---------------GCAPDAVSY------------TT 140
           +AL    R+D A ++   M  +               G + DA++              T
Sbjct: 151 EALSAAGRMDLARRVFDAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNT 210

Query: 141 IVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD-- 193
           +V+  C+ G+V+EA  L  R         V  +N  I+ LCK  ++ EA+ +  +M +  
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAW 270

Query: 194 -RGID-PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +G+  P+ +T+  ++S  CD G V+ +  ++  M   G    + S+   L G +  GR 
Sbjct: 271 EQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRV 330

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +L + M  EG  PN   Y+ ++ GLC  G   +   V   +      P+V TY++L
Sbjct: 331 GEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSL 390

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +  +   GN   A++I + M   GC+PN+  Y  +++ L +     +   L+E+M+ +  
Sbjct: 391 LHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGY 450

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-----------------------KQYECLP 408
             +T + N  I GLC   +++ AM ++D M                           CLP
Sbjct: 451 SLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLP 510

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +  TY+ L++ L +  R  EA + + E+    I  + V Y+T +HG C  G    A ++L
Sbjct: 511 DRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVL 570

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M          ++N++I+ + ++ K +  ++L+  ++  G  + ++++Y SL+   C 
Sbjct: 571 RDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKG-ISSNVMTYNSLIKSFCG 629

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G + +A   L +ML   I PN  ++ +L+++ 
Sbjct: 630 RGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAF 662



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 238/499 (47%), Gaps = 40/499 (8%)

Query: 40  YRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN 99
           Y R G +  AL +   + E  L     + N ++     E R      +   M+  G+ PN
Sbjct: 184 YCRAGRSADALAVLDAMPEMNLV----VCNTVVAGFCREGRVDEAERLVDRMRAQGLAPN 239

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGN---KGCA-PDAVSYTTIVSSICKLGQVEEAR 155
           V T+N  + ALCK  RV  AY++  +M     +G   PD V++  ++S  C  G V+EA 
Sbjct: 240 VVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEAT 299

Query: 156 ELA--MRFG---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L   MR G     V  YN  ++GL K  ++ EA  LL EM   G+ PN  TY+ I+  L
Sbjct: 300 VLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGL 359

Query: 211 CDVGNVETSLGILGQMFVRG--CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           C  G       +  + FVR     P++ ++TSLL  Y   G T  A+ + + M ++G  P
Sbjct: 360 CKEGKAFDVRRV--EDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAP 417

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI- 327
           N+  Y+ L+  L   G   E   +  +M E     +  + + +IDG  +   L  A  I 
Sbjct: 418 NLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIV 477

Query: 328 ---WNR-------------------MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
              WN                     IS  C P+ + Y+ ++  LC+   F +A   + +
Sbjct: 478 DGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVE 537

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  ++  P++V ++TFI G C  G+   A+K+L  M++  C P+  +YN L+ G     +
Sbjct: 538 MIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQK 597

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             E  +L++E+++ GI  N++TYN+++   C  GMV +A  LL +ML      +  +F +
Sbjct: 598 SDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGL 657

Query: 486 IIYAYCKQGKVNNAIQLLD 504
           +I A+CK    + A ++ D
Sbjct: 658 LIKAFCKTADFSAAQRVFD 676



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/512 (25%), Positives = 218/512 (42%), Gaps = 47/512 (9%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  +++ +   G+ ++A  +   +R  G    V+ YN  L  L+   R      + S M
Sbjct: 281 TFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEM 340

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             +G++PN +TYNI++  LCK  +     ++   + +    PD V+YT+++ + C  G  
Sbjct: 341 AHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNT 400

Query: 152 EEAR----ELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A     E+A +     +  YN L+  L K  +  E   LL  M ++G   +  + + I
Sbjct: 401 TAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNII 460

Query: 207 ISSLCDVGNVETSLGI--------------LGQMFV---------RGCNPNIHSFTSLLK 243
           I  LC    +E ++ I              LG  FV         + C P+  ++++L+ 
Sbjct: 461 IDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMN 520

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                GR  EA      MI +   P+ V Y T IHG C +G    A+ V   ME+ SC P
Sbjct: 521 ALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNP 580

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  +Y+ LI GF +        ++ + M   G S NV+ Y  ++K  C   M ++A  L+
Sbjct: 581 STRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLL 640

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD-------QMKQYECL--PNITTYN 414
           ++M      PN  +F   IK  C       A ++ D       Q +   CL    ++TY 
Sbjct: 641 DEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTELSTYA 700

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             ++        K   E   E+    I +    Y  I+ G+C       A  LL   + +
Sbjct: 701 RWIEA-------KNILETALEMR---ISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAK 750

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           G   D  TF  +I A  + GK ++A  L +++
Sbjct: 751 GYSFDPATFMPVIDALSESGKKHDADMLSEKM 782



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 202/459 (44%), Gaps = 36/459 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            Q LL +M  EGV  +   +  +++   + G A    ++   +R   + P V  Y  +L 
Sbjct: 333 AQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLH 392

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           A  ++   +  N I   M + G  PN+FTYN+LL++L K  R     +LL  M  KG + 
Sbjct: 393 AYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSL 452

Query: 134 DAVSYTTIVSSICKLGQVEEA---------------RELAMRFGSGVS------------ 166
           D  S   I+  +C+  ++E A               R L   F S VS            
Sbjct: 453 DTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDR 512

Query: 167 -VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             Y+ L+N LCKE + +EA   L EM+ + I P+ + Y T I   C  G    ++ +L  
Sbjct: 513 ITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRD 572

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  R CNP+  S+  L+ G+    ++ E   L + M  +G   NV+ Y++LI   C  G 
Sbjct: 573 MEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGM 632

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +++A+ +  +M +N   PNVT++  LI  F K  +   A ++++  +S  C    V Y  
Sbjct: 633 VNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALST-CGQKEVLYCL 691

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQ 403
           M   L     + +A +++E          +  +   I GLC     D A  LL     K 
Sbjct: 692 MCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKG 751

Query: 404 YECLPNITTYNELLDGLLRVNRVKEA---FELVTEIEKC 439
           Y   P   T+  ++D L    +  +A    E + EI  C
Sbjct: 752 YSFDP--ATFMPVIDALSESGKKHDADMLSEKMMEIADC 788



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 4/266 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++   D  +  L +M  + +S    ++ + I+ Y   G    A+K+   + +  
Sbjct: 518 LMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRS 577

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+ + YN ++     + +   I  + S MK  G+  NV TYN L+K+ C    V+ A 
Sbjct: 578 CNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAM 637

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR---ELAMRF-GSGVSVYNALINGLC 176
            LL EM      P+  S+  ++ + CK      A+   ++A+   G    +Y  +   L 
Sbjct: 638 PLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTELS 697

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              +  EA  +L   ++  I      Y  II+ LCDV   + +  +L     +G + +  
Sbjct: 698 TYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPA 757

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMI 262
           +F  ++      G+ H+A  L  +M+
Sbjct: 758 TFMPVIDALSESGKKHDADMLSEKMM 783


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 233/464 (50%), Gaps = 41/464 (8%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK---LGQVEEAR 155
           N    ++L+ A  KN  +D A +     G+ G    A+S   ++ S+ K   +G VE   
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 156 E--LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           +  +  R G  V  ++ +INGLCK  K ++A  ++ +M   G  P+VITY+TII   C  
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +  +L +M  +  +PN  +F  L+ G+        A  ++  M R+G  PNVV Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++LI+GLCSNG +DEA+ +  +M      PNV TY+ALI+GF K   L  A ++ + +  
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G +PNV                                   +TFNT I      GR+D 
Sbjct: 398 RGLAPNV-----------------------------------ITFNTLIDAYGKAGRMDD 422

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A  L   M      PN++TYN L+ G  R   VKEA +L  E+E  G++ ++VTYN ++ 
Sbjct: 423 AFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVD 482

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +C+ G   +A +LL +M   G     +T+N +I  Y ++G    A+ +   +   G   
Sbjct: 483 ALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR-R 541

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            +I++Y  L+ G CN G ++EA   L +ML +G+ PN  T+++L
Sbjct: 542 ANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 229/465 (49%), Gaps = 41/465 (8%)

Query: 28  CSEGVFIS-VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           C+  + +  ++ +Y + G  + AL+ F R  ++G + +    N +L +L+ E R  ++  
Sbjct: 156 CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVES 215

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +Y  M R  +  NV T+++                                   +++ +C
Sbjct: 216 VYKEMIRRRIGVNVVTFDV-----------------------------------VINGLC 240

Query: 147 KLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K+G+ ++A ++     A  F   V  YN +I+G CK  K+ +A  LL EMV + I PN I
Sbjct: 241 KVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           T++ +I   C   NV  +  +  +M  +G  PN+ ++ SL+ G    G+  EA  L ++M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              G  PNVV Y+ LI+G C    + EA  +   + +    PNV T++ LID + KAG +
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  + + M+  G  PNV  Y C++   C+     +A  L ++M       + VT+N  
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           +  LC  G    A++LLD+M +    P+  TYN L+DG  R      A  + T +EK G 
Sbjct: 481 VDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR 540

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           + NIVTYN ++ G C  G + EA +LL +ML +G   +  T++I+
Sbjct: 541 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/470 (30%), Positives = 226/470 (48%), Gaps = 45/470 (9%)

Query: 106 LLKALCKNNRVDGA--YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE---EARELAMR 160
           LL +  KN     +  +  L  +G+ GCA +++    +V +  K G+++   E  + A  
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 161 FGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           +G  +S    N ++  L KE +I     +  EM+ R I  NV+T+  +I+ LC V     
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKV----- 242

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
                                         G+  +A D+   M   GF P+V+ Y+T+I 
Sbjct: 243 ------------------------------GKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C  G M +A ++  +M      PN  T++ LIDGF +  N+  A +++  M   G  P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           NVV Y  ++  LC N    +A  L +KM+     PN VT+N  I G C    +  A ++L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D + +    PN+ T+N L+D   +  R+ +AF L + +   G+  N+ TYN ++ G CR 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G V EA +L  +M   G K D +T+NI++ A CK+G+   A++LLD +   G  NP  ++
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG-LNPSHLT 511

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           Y +L+ G    G    A      M  +G   N  T+NVL++  F N G L
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG-FCNKGKL 560



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 191/384 (49%), Gaps = 5/384 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L ++  I  V+ + ++M    +  +   F  VIN   +VG  ++A  +   ++ +G
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+V  YN I+D      +    + +   M    + PN  T+NIL+   C++  V  A 
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           K+  EM  +G  P+ V+Y ++++ +C  G+++EA  L      M     V  YNALING 
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+  ++EA  +L ++  RG+ PNVIT++T+I +    G ++ +  +   M   G  PN+
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ G+   G   EA  L   M   G   ++V Y+ L+  LC  G   +AV +  +
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P+  TY+ALIDG+ + GN   A  +   M   G   N+V Y  ++K  C    
Sbjct: 500 MFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGK 559

Query: 356 FHQAHSLIEKMAFENCPPNTVTFN 379
             +A+ L+ +M  +   PN  T++
Sbjct: 560 LEEANRLLNEMLEKGLIPNRTTYD 583



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 5/360 (1%)

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           SL +LG     GC  +I     L+  Y+  G    A + ++R    GF  + ++ + ++ 
Sbjct: 147 SLSVLGSW---GCANSI-IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLV 202

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            L   G +    SV  +M       NV T+  +I+G  K G    A  +   M + G SP
Sbjct: 203 SLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSP 262

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V+ Y  ++   C+     +A +L+++M  +   PN +TFN  I G C    V  A K+ 
Sbjct: 263 SVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVF 322

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           ++M++    PN+ TYN L++GL    ++ EA  L  ++   G++ N+VTYN +++G C+ 
Sbjct: 323 EEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK 382

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            M+ EA ++L  +   G   + ITFN +I AY K G++++A  L   +   G   P++ +
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC-PNVST 441

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           Y  L+ G C  G ++EA    ++M   G+  +  T+N+LV +L         V +LD++ 
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMF 501



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 144/279 (51%), Gaps = 5/279 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +   + + ++M+ +G+  +   + S+IN     G  ++AL +  ++   GLKP V  YN 
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++    +        +  ++ + G+ PNV T+N L+ A  K  R+D A+ L   M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAF 185
             P+  +Y  ++   C+ G V+EAR+LA    G+G+      YN L++ LCK+ +  +A 
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL EM + G++P+ +TY+ +I      GN   +L +   M  +G   NI ++  L+KG+
Sbjct: 495 RLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGF 554

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
              G+  EA+ L N M+ +G +PN   Y  L   +   G
Sbjct: 555 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 17/320 (5%)

Query: 260 RMIREGFLPNV-VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           R + + F  N   + ST+ H L   GS   A S+   M   +   N     AL +GF +A
Sbjct: 127 RALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLAL-EGFDRA 185

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+         R+ +  C+P +V+       L +        S+ ++M       N VTF
Sbjct: 186 GDY------GFRLSALSCNPMLVS-------LVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           +  I GLC  G+   A  +++ MK +   P++ TYN ++DG  +  ++ +A  L+ E+  
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             I  N +T+N ++ G CR   V  A ++  +M  +G + + +T+N +I   C  GK++ 
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ L D++ G G   P++++Y +L+ G C    ++EA   L  +   G+ PN  T+N L+
Sbjct: 353 ALGLQDKMSGMG-LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 559 RSLFSNLGHLGPVYILDDIM 578
            + +   G +   ++L  +M
Sbjct: 412 DA-YGKAGRMDDAFLLRSMM 430



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 30/214 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G+   +D    L   M   GV  +   +  +I  + R G  ++A K+   +   G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LK  +  YN ++DAL  +        +   M   G+ P+  TYN L+    +      A 
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +   M  KG   + V+Y  ++   C  G++EEA                          
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANR------------------------ 565

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                 LL EM+++G+ PN  TY  +   + + G
Sbjct: 566 ------LLNEMLEKGLIPNRTTYDILRDEMMEKG 593


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/590 (27%), Positives = 278/590 (47%), Gaps = 46/590 (7%)

Query: 9   CE-IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFY-RIREFGLKPTVK 66
           CE + G    L  M   GV     ++ S+I+ +   GL    + + Y ++   G+ P V 
Sbjct: 71  CERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF 130

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
             N ++ +     R S      S ++   +  +  TYN ++  LC++   D AY+ L EM
Sbjct: 131 ALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAF 185
              G  PD VSY T++   CK+G    A+ L        +  +  L++     H IEEA+
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +MV  G DP+V+T+S+II+ LC  G V     +L +M      PN  ++T+L+   
Sbjct: 248 R---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 304

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                   A  L+++M+  G   ++V Y+ L+ GL   G + EA      + E++  PNV
Sbjct: 305 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+AL+DG  KAG+L  A  I  +M+     PNVV Y+ M+    +  M  +A SL+ K
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  +N  PN  T+ T I GL   G+ + A++L  +M+      N    + L++ L R+ R
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484

Query: 426 VKEAFELVTEIEKCGIQL-----------------------------------NIVTYNT 450
           +KE   LV ++   G+ L                                   ++V+YN 
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 544

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G+ + G V   +   G M  +G + D  TFNI++ +  KQG     ++L D+++  G
Sbjct: 545 LISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 603

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
              P ++S   ++  +C +G M+EA   L +M+   I PN  T+ + + +
Sbjct: 604 -IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 261/558 (46%), Gaps = 10/558 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+   V  +   + ++++S  +  +   AL ++ ++   G+   + +Y  ++D L 
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  +  D   PNV TY  L+  LCK   +  A  ++ +M  K   P+ V
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +Y+++++   K G +EEA  L  +      V     Y  +I+GL K  K E A  L  EM
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G++ N      +++ L  +G ++   G++  M  +G   +  ++TSL+  +  GG  
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPPNVTTYSA 310
             A      M   G   +VV+Y+ LI G+   G +      +Y+ M E    P++ T++ 
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFNI 578

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +++   K G+  G  ++W++M S G  P++++   +V +LC+N    +A  ++ +M    
Sbjct: 579 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 638

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+  F+       R D   K  + +  Y    +   YN L+  L ++   K+A 
Sbjct: 639 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 698

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++ ++E  G   + VT+N+++HG      V +A      M+  G   +  T+N II   
Sbjct: 699 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 758

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G +    + L  ++  G   PD  +Y +L+ G    G M+ +     +M+ +G+ P 
Sbjct: 759 SDAGLIKEVDKWLSEMKSRG-MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPK 817

Query: 551 FATWNVLVRSLFSNLGHL 568
            +T+NVL+ S F+N+G +
Sbjct: 818 TSTYNVLI-SEFANVGKM 834



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 250/553 (45%), Gaps = 44/553 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM V G+     V+  +++   + G   +A K F  + E    P V  Y  ++D L 
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S    I + M    + PNV TY+ ++    K   ++ A  LL +M ++   P+  
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435

Query: 137 SYTTIVSSICKLGQVEEARELA--MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           +Y T++  + K G+ E A EL+  MR   GV     + +AL+N L +  +I+E   L+ +
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRL-IGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494

Query: 191 MV-----------------------------------DRGIDPNVITYSTIISSLCDVGN 215
           MV                                   +RG+  +V++Y+ +IS +   G 
Sbjct: 495 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 554

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V       G M  +G  P+I +F  ++      G +     LW++M   G  P++++ + 
Sbjct: 555 VGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 613

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++  LC NG M+EA+ +  QM      PN+TTY   +D  +K        +    ++S G
Sbjct: 614 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 673

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
              +   Y  ++  LC+  M  +A  ++  M      P+TVTFN+ + G      V  A+
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                M +    PN+ TYN ++ GL     +KE  + ++E++  G++ +  TYN ++ G 
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 793

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            + G +  +  +  +M+ +G      T+N++I  +   GK+  A +LL  + G    +P+
Sbjct: 794 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM-GKRGVSPN 852

Query: 516 IISYTSLLWGICN 528
             +Y +++ G+C 
Sbjct: 853 TSTYCTMISGLCK 865



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 202/407 (49%), Gaps = 16/407 (3%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           ++++G   E+ G   L++ M  +GV+  +  + S+I+ + + G  E AL     ++E G+
Sbjct: 479 LKRIGRIKEVKG---LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535

Query: 62  KPTVKIYNHILDALLAENRFSMINP--IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
              V  YN ++  +L   +F  +     Y  M+  G+EP++ T+NI++ +  K    +G 
Sbjct: 536 PWDVVSYNVLISGML---KFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 592

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALING 174
            KL  +M + G  P  +S   +V  +C+ G++EEA     + + M     ++ Y   ++ 
Sbjct: 593 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 652

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             K  + +  F     ++  GI  +   Y+T+I++LC +G  + +  ++G M  RG  P+
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +F SL+ GY +G    +A   ++ M+  G  PNV  Y+T+I GL   G + E      
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P+  TY+ALI G AK GN+ G+  I+  MI++G  P    Y  ++       
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 832

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG-CGR--VDWAMKLL 398
              QA  L+++M      PNT T+ T I GLC  C    V+W  K +
Sbjct: 833 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAM 879



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 224/499 (44%), Gaps = 45/499 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   ++++ QM  + V  +   + S+IN Y + G+ E+A+ +  ++ +  
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  ++D L    +  M   +   M+  G+E N +  + L+  L +  R+    
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALIN 173
            L+ +M +KG   D ++YT+++    K G  E A       +E  M +   V  YN LI+
Sbjct: 490 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD--VVSYNVLIS 547

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS------------------------ 209
           G+ K  K+  A W    M ++GI+P++ T++ +++S                        
Sbjct: 548 GMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 606

Query: 210 -----------LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
                      LC+ G +E ++ IL QM +   +PN+ ++   L       R        
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 666

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             ++  G   +   Y+TLI  LC  G   +A  V   ME     P+  T+++L+ G+   
Sbjct: 667 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 726

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
            ++  A   ++ M+  G SPNV  Y  +++ L    +  +    + +M      P+  T+
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTY 786

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G    G +  +M +  +M     +P  +TYN L+     V ++ +A EL+ E+ K
Sbjct: 787 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846

Query: 439 CGIQLNIVTYNTILHGVCR 457
            G+  N  TY T++ G+C+
Sbjct: 847 RGVSPNTSTYCTMISGLCK 865



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 12/259 (4%)

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI- 363
           V+ +  L   +     L GA++  + M + G  P+   +  ++     N + H   SLI 
Sbjct: 58  VSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIY 117

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            KM      P+    N  I   C  GR+ +A+ LL   +      +  TYN ++ GL   
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEH 174

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
               EA++ ++E+ K GI  + V+YNT++ G C+ G  V A  L+ ++    ++L+ IT 
Sbjct: 175 GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLITH 230

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            I++ +Y     +  A +  D +  G  ++PD+++++S++  +C  G + E  + L++M 
Sbjct: 231 TILLSSYYNLHAIEEAYR--DMVMSG--FDPDVVTFSSIINRLCKGGKVLEGGLLLREME 286

Query: 544 NEGICPNFATWNVLVRSLF 562
              + PN  T+  LV SLF
Sbjct: 287 EMSVYPNHVTYTTLVDSLF 305


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 237/461 (51%), Gaps = 10/461 (2%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTY 103
           +  +A+ +FY+I+    +PT + YN ++  L+ E ++  ++ +Y+ M  +G   P+  TY
Sbjct: 174 MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTY 233

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF 161
           + L+ A CK  R D A +LL EM   G  P    YT +++   KL  V  A  L   MR 
Sbjct: 234 SALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRH 293

Query: 162 G---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                 V  Y  LI GL K  +I+EA+    EM   G  P+ +  + +I+ L   G ++ 
Sbjct: 294 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDD 353

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
           ++ +  +M    C P++ ++ +++K  +    R  E    + RM   G  P+   YS LI
Sbjct: 354 AMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILI 413

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            G C    M++A+ +  +M+E   PP    Y +LID   KA     A +++  +  N  S
Sbjct: 414 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 473

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
            +   Y  M+K L +      A ++ ++M    C P+   +N  + GL   G +D A+  
Sbjct: 474 SSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 533

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           + +M+++ C+P+I +YN +L+GL +      A E+++ +++  ++ ++V+YNT+L  +  
Sbjct: 534 MRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSH 593

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
           AGM  EA +L+ +M   G + D IT++ I+ A    GKV++
Sbjct: 594 AGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI---GKVDH 631



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 224/463 (48%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +++ L     V  A  +  ++  + C P A +Y +++  +   GQ  +  EL     +  
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEG 224

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+  CK  + + A  LL EM + G+ P    Y+ +I+    + +V  +
Sbjct: 225 HCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGA 284

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L +  +M  + C P++ ++T L++G    GR  EA   +  M REG  P+ V  + +I+ 
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINF 344

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +D+A+ +  +M    C P+V TY+ +I    ++ +       W  RM  +G SP
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R D A +L 
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++  L +  R+ +A  +  E+ K G   ++  YN ++ G+ R 
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 524

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           GM+ EA   + +M   G   D  ++NII+    K G  + A+++L  ++      PD++S
Sbjct: 525 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST-VRPDVVS 583

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  + ++G  +EA   +++M   G   +  T++ ++ ++
Sbjct: 584 YNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 209/432 (48%), Gaps = 9/432 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L  + +   V  L  +M  EG    + + + ++I+++ ++G  + A ++   ++E 
Sbjct: 200 MIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKEN 259

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++PT KIY  ++      +       ++  M+     P+VFTY  L++ L K  R+D A
Sbjct: 260 GMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEA 319

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALING 174
           Y    EM  +GC PD V    +++ + K G++++A +L    G+      V  YN +I  
Sbjct: 320 YHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKA 379

Query: 175 L--CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           L   K    E   W    M + GI P+  TYS +I   C    +E ++ +L +M  +G  
Sbjct: 380 LFESKSRASEVPSWFE-RMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 438

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P   ++ SL+       R   A +L+  +       +   Y+ +I  L   G +D+A+++
Sbjct: 439 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 498

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +  C P+V  Y+AL+ G A+ G L  A     RM  +GC P++ +Y  ++  L +
Sbjct: 499 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 558

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               H+A  ++  M      P+ V++NT +  L   G  + A KL+++M       ++ T
Sbjct: 559 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLIT 618

Query: 413 YNELLDGLLRVN 424
           Y+ +L+ + +V+
Sbjct: 619 YSSILEAIGKVD 630



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 220/479 (45%), Gaps = 11/479 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQ 150
           KR   E +  TY  L++ L    +    +K++ EM  N  C       + +V  +     
Sbjct: 115 KRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKM 174

Query: 151 VEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYS 204
           V +A  +  +  +         YN++I  L  E +  +   L  EM   G   P+ +TYS
Sbjct: 175 VSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYS 234

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +IS+ C +G  +++  +L +M   G  P    +T L+  +      H A  L+  M  +
Sbjct: 235 ALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQ 294

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
              P+V  Y+ LI GL   G +DEA    Y+M+   C P+    + +I+   KAG L  A
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDA 354

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQN-NMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
            +++  M +  C P+VV Y  ++K L ++ +   +  S  E+M      P++ T++  I 
Sbjct: 355 MKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 414

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQ 442
           G C   R++ AM LL++M +    P    Y  L+D L +  R   A EL  E+ E CG  
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
              V Y  ++  + +AG + +A  +  +M   G   D   +N ++    + G ++ A+  
Sbjct: 475 SARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 533

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + R++  G   PDI SY  +L G+  +GG   A   L  M    + P+  ++N ++ +L
Sbjct: 534 MRRMQEHG-CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 591



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 7/251 (2%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K     V    ++MK  G+S S   +  +I+ + +    E+A+ +   + E G  P    
Sbjct: 384 KSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 443

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++DAL    R+ +   ++  +K +    +   Y +++K L K  R+D A  +  EM 
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 503

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIE 182
             GCAPD  +Y  ++S + + G ++EA     R         ++ YN ++NGL K     
Sbjct: 504 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 563

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  +L  M    + P+V++Y+T++ +L   G  E +  ++ +M   G   ++ +++S+L
Sbjct: 564 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSIL 623

Query: 243 KGYLLGGRTHE 253
           +   +G   HE
Sbjct: 624 EA--IGKVDHE 632



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 10/242 (4%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           +   Y  +++ L     + +   +I++M     C       +  ++ L     V  A+ +
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAI 181

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILHGVC 456
             Q+K  +C P    YN ++  L+   +  +  EL  E+   G    + +TY+ ++   C
Sbjct: 182 FYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFC 241

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G    A QLL +M   G +     + ++I  + K   V+ A+ L + +R      PD+
Sbjct: 242 KLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQ-YCRPDV 300

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +YT L+ G+  +G + EA+ +  +M  EG  P+     V++ ++ + LG  G    LDD
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD----TVVMNNMINFLGKAGR---LDD 353

Query: 577 IM 578
            M
Sbjct: 354 AM 355



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           + +TY ALI             ++   M+ N  C       + +V++L    M  +A ++
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAI 181

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLL 421
             ++    C P    +N+ I  L   G+     +L ++M  +  C P+  TY+ L+    
Sbjct: 182 FYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFC 241

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           ++ R   A +L+ E+++ G+Q     Y  ++    +   V  A  L  +M  +  + D  
Sbjct: 242 KLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVF 301

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+  +I    K G+++ A      ++  G   PD +   +++  +  +G + +A    Q+
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREG-CRPDTVVMNNMINFLGKAGRLDDAMKLFQE 360

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           M      P+  T+N ++++LF +
Sbjct: 361 MGTLRCIPSVVTYNTIIKALFES 383


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/590 (27%), Positives = 278/590 (47%), Gaps = 46/590 (7%)

Query: 9   CE-IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFY-RIREFGLKPTVK 66
           CE + G    L  M   GV     ++ S+I+ +   GL    + + Y ++   G+ P V 
Sbjct: 73  CERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF 132

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
             N ++ +     R S      S ++   +  +  TYN ++  LC++   D AY+ L EM
Sbjct: 133 ALNVLIHSFCKVGRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 189

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSVYNALINGLCKEHKIEEAF 185
              G  PD VSY T++   CK+G    A+ L        +  +  L++     H IEEA+
Sbjct: 190 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 249

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
               +MV  G DP+V+T+S+II+ LC  G V     +L +M      PN  ++T+L+   
Sbjct: 250 R---DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSL 306

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                   A  L+++M+  G   ++V Y+ L+ GL   G + EA      + E++  PNV
Sbjct: 307 FKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 366

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+AL+DG  KAG+L  A  I  +M+     PNVV Y+ M+    +  M  +A SL+ K
Sbjct: 367 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 426

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  +N  PN  T+ T I GL   G+ + A++L  +M+      N    + L++ L R+ R
Sbjct: 427 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 486

Query: 426 VKEAFELVTEIEKCGIQL-----------------------------------NIVTYNT 450
           +KE   LV ++   G+ L                                   ++V+YN 
Sbjct: 487 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNV 546

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G+ + G V   +   G M  +G + D  TFNI++ +  KQG     ++L D+++  G
Sbjct: 547 LISGMLKFGKVGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCG 605

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
              P ++S   ++  +C +G M+EA   L +M+   I PN  T+ + + +
Sbjct: 606 -IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 654



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/558 (24%), Positives = 261/558 (46%), Gaps = 10/558 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+   V  +   + ++++S  +  +   AL ++ ++   G+   + +Y  ++D L 
Sbjct: 283 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 342

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      +  +  D   PNV TY  L+  LCK   +  A  ++ +M  K   P+ V
Sbjct: 343 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 402

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEM 191
           +Y+++++   K G +EEA  L  +      V     Y  +I+GL K  K E A  L  EM
Sbjct: 403 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 462

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G++ N      +++ L  +G ++   G++  M  +G   +  ++TSL+  +  GG  
Sbjct: 463 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 522

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPPNVTTYSA 310
             A      M   G   +VV+Y+ LI G+   G +      +Y+ M E    P++ T++ 
Sbjct: 523 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV--GADWAYKGMREKGIEPDIATFNI 580

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +++   K G+  G  ++W++M S G  P++++   +V +LC+N    +A  ++ +M    
Sbjct: 581 MMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME 640

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+  F+       R D   K  + +  Y    +   YN L+  L ++   K+A 
Sbjct: 641 IHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAA 700

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++ ++E  G   + VT+N+++HG      V +A      M+  G   +  T+N II   
Sbjct: 701 MVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL 760

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
              G +    + L  ++  G   PD  +Y +L+ G    G M+ +     +M+ +G+ P 
Sbjct: 761 SDAGLIKEVDKWLSEMKSRG-MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPK 819

Query: 551 FATWNVLVRSLFSNLGHL 568
            +T+NVL+ S F+N+G +
Sbjct: 820 TSTYNVLI-SEFANVGKM 836



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 250/553 (45%), Gaps = 44/553 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM V G+     V+  +++   + G   +A K F  + E    P V  Y  ++D L 
Sbjct: 318 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 377

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S    I + M    + PNV TY+ ++    K   ++ A  LL +M ++   P+  
Sbjct: 378 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 437

Query: 137 SYTTIVSSICKLGQVEEARELA--MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           +Y T++  + K G+ E A EL+  MR   GV     + +AL+N L +  +I+E   L+ +
Sbjct: 438 TYGTVIDGLFKAGKEEMAIELSKEMRL-IGVEENNYILDALVNHLKRIGRIKEVKGLVKD 496

Query: 191 MV-----------------------------------DRGIDPNVITYSTIISSLCDVGN 215
           MV                                   +RG+  +V++Y+ +IS +   G 
Sbjct: 497 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 556

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V       G M  +G  P+I +F  ++      G +     LW++M   G  P++++ + 
Sbjct: 557 VGADWAYKG-MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNI 615

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++  LC NG M+EA+ +  QM      PN+TTY   +D  +K        +    ++S G
Sbjct: 616 VVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYG 675

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
              +   Y  ++  LC+  M  +A  ++  M      P+TVTFN+ + G      V  A+
Sbjct: 676 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 735

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                M +    PN+ TYN ++ GL     +KE  + ++E++  G++ +  TYN ++ G 
Sbjct: 736 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 795

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            + G +  +  +  +M+ +G      T+N++I  +   GK+  A +LL  + G    +P+
Sbjct: 796 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM-GKRGVSPN 854

Query: 516 IISYTSLLWGICN 528
             +Y +++ G+C 
Sbjct: 855 TSTYCTMISGLCK 867



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 202/407 (49%), Gaps = 16/407 (3%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           ++++G   E+ G   L++ M  +GV+  +  + S+I+ + + G  E AL     ++E G+
Sbjct: 481 LKRIGRIKEVKG---LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 537

Query: 62  KPTVKIYNHILDALLAENRFSMINP--IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
              V  YN ++  +L   +F  +     Y  M+  G+EP++ T+NI++ +  K    +G 
Sbjct: 538 PWDVVSYNVLISGML---KFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGI 594

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALING 174
            KL  +M + G  P  +S   +V  +C+ G++EEA     + + M     ++ Y   ++ 
Sbjct: 595 LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDT 654

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             K  + +  F     ++  GI  +   Y+T+I++LC +G  + +  ++G M  RG  P+
Sbjct: 655 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 714

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +F SL+ GY +G    +A   ++ M+  G  PNV  Y+T+I GL   G + E      
Sbjct: 715 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 774

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P+  TY+ALI G AK GN+ G+  I+  MI++G  P    Y  ++       
Sbjct: 775 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVG 834

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG-CGR--VDWAMKLL 398
              QA  L+++M      PNT T+ T I GLC  C    V+W  K +
Sbjct: 835 KMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAM 881



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 224/499 (44%), Gaps = 45/499 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   ++++ QM  + V  +   + S+IN Y + G+ E+A+ +  ++ +  
Sbjct: 372 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 431

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  ++D L    +  M   +   M+  G+E N +  + L+  L +  R+    
Sbjct: 432 VVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 491

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALIN 173
            L+ +M +KG   D ++YT+++    K G  E A       +E  M +   V  YN LI+
Sbjct: 492 GLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD--VVSYNVLIS 549

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS------------------------ 209
           G+ K  K+  A W    M ++GI+P++ T++ +++S                        
Sbjct: 550 GMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 608

Query: 210 -----------LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
                      LC+ G +E ++ IL QM +   +PN+ ++   L       R        
Sbjct: 609 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 668

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             ++  G   +   Y+TLI  LC  G   +A  V   ME     P+  T+++L+ G+   
Sbjct: 669 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 728

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
            ++  A   ++ M+  G SPNV  Y  +++ L    +  +    + +M      P+  T+
Sbjct: 729 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTY 788

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           N  I G    G +  +M +  +M     +P  +TYN L+     V ++ +A EL+ E+ K
Sbjct: 789 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 848

Query: 439 CGIQLNIVTYNTILHGVCR 457
            G+  N  TY T++ G+C+
Sbjct: 849 RGVSPNTSTYCTMISGLCK 867



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 144/303 (47%), Gaps = 18/303 (5%)

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP-----NVTTYSALIDGFAKAGN 320
           FL N  ++S++        S + ++S++ +  +    P      V+ +  L   +     
Sbjct: 17  FLSNCRSFSSIKRPQIPE-SEETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCER 75

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI-EKMAFENCPPNTVTFN 379
           L GA++  + M + G  P+   +  ++     N + H   SLI  KM      P+    N
Sbjct: 76  LYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALN 135

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I   C  GR+ +A+ LL   +      +  TYN ++ GL       EA++ ++E+ K 
Sbjct: 136 VLIHSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKM 192

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  + V+YNT++ G C+ G  V A  L+     E ++L+ IT  I++ +Y     +  A
Sbjct: 193 GILPDTVSYNTLIDGFCKVGNFVRAKALVD----EISELNLITHTILLSSYYNLHAIEEA 248

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +  D +  G  ++PD+++++S++  +C  G + E  + L++M    + PN  T+  LV 
Sbjct: 249 YR--DMVMSG--FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 304

Query: 560 SLF 562
           SLF
Sbjct: 305 SLF 307


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 245/472 (51%), Gaps = 14/472 (2%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV--SYTTIVSSICKLGQVEEAR 155
           P+V   N L++ LC+  R   A +++     + C P+A   +Y  +V   C+ G +E+AR
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVV-----EACGPEATAATYGALVDGYCRAGLLEDAR 148

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            +     A    S    +N LI+ LC+  ++ +A  +L  M+ RG  P+V+TY+ ++ + 
Sbjct: 149 RVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAA 208

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C       +L ++  M   GC PN  ++  ++      G   +A +L N +   G  PN 
Sbjct: 209 CKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNT 268

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y+T++ G CS     +A  +  +M   +CPPN  T + +I+   + G L   +    +
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEK 328

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  +GC+ NVV Y  ++  +C+      A  L+  M    C P+ VT+NT +KGLC   R
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            + A +L+ +M Q + LP+ +T+N ++    +   + +AFE+  ++ + G   N  TY+T
Sbjct: 389 WEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYST 448

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           I+ G+ +AG + +A +LL +M  +G   D + + ++  +  K+ K+   +Q++ +++  G
Sbjct: 449 IIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSG 507

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             +P  + Y ++L G+C +G    A   L  M++ G  P+ +T+ +L+  LF
Sbjct: 508 -ISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLF 558



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 202/382 (52%), Gaps = 6/382 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P V  YN +L A      +     +   M+ +G EPN  TYN+++ A+C+   VD A
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQA 252

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALING 174
            +LL  + ++GC P+ V+Y T++   C + +  +A E+             +  N +IN 
Sbjct: 253 RELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINT 312

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC++  +++    L +M   G   NV+TY+ +IS +C+ GNV+++L +L  M   GC P+
Sbjct: 313 LCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPD 372

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I ++ ++LKG     R  +A +L  +M +   LP+   ++T+I   C  G + +A  V  
Sbjct: 373 IVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFK 432

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           QM E  C PN TTYS +I G  KAG +  A ++ N M + G + + + Y  + + L + +
Sbjct: 433 QMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKED 491

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +   ++ K+      P TV +NT + GLC  G+ D+A+ +L  M    C+P+ +TY 
Sbjct: 492 KIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYI 551

Query: 415 ELLDGLLRVNRVKEAFELVTEI 436
            L++GL      KEA EL++ +
Sbjct: 552 ILIEGLFYEGYSKEARELLSRL 573



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 216/481 (44%), Gaps = 64/481 (13%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G + T   Y  ++D             +   M       + + +N L+ ALC+  RV  A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
             +L  M  +GCAPD V+Y                              N L+   CK  
Sbjct: 183 LVVLDGMLCRGCAPDVVTY------------------------------NILLQAACKGR 212

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
              +A  L+  M   G +PN +TY+ II ++C  G+V+ +  +L  +  RGC PN  ++ 
Sbjct: 213 GYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYN 272

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           ++LKG+    R  +A ++ + M+RE   PN    + +I+ LC  G + +      +M ++
Sbjct: 273 TVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKH 332

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C  NV TY+A+I G  + GN+  A ++ + M S GC P++V Y  ++K LC  + +  A
Sbjct: 333 GCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDA 392

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L+ KM+  +  P+  TFNT I   C  G +  A ++  QM +  C PN TTY+ ++ G
Sbjct: 393 EELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGG 452

Query: 420 LLRVNRVKEAFELVTE----------------------------------IEKCGIQLNI 445
           L +  ++++A EL+ E                                  ++  GI    
Sbjct: 453 LTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQT 512

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V YNT+L G+CR G    A  +L  M+  G   D  T+ I+I     +G    A +LL R
Sbjct: 513 VLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSR 572

Query: 506 I 506
           +
Sbjct: 573 L 573



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 174/368 (47%), Gaps = 6/368 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  M+ EG   +   +  +I++  R G  +QA ++   +   G KP    YN +L    
Sbjct: 220 LIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFC 279

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R+   + I   M R+   PN  T N+++  LC+   +      L +M   GC  + V
Sbjct: 280 SIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVV 339

Query: 137 SYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++S +C+ G V+ A EL      FG    +  YN ++ GLC   + E+A  L+ +M
Sbjct: 340 TYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM 399

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 P+  T++TIIS  C  G +  +  +  QM  +GCNPN  ++++++ G    G+ 
Sbjct: 400 SQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKM 459

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L N M  +GF  + + Y  L   L     ++E V V ++++++   P    Y+ +
Sbjct: 460 EQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTV 518

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  + G    A  +   M+S GC P+   Y  +++ L       +A  L+ ++   + 
Sbjct: 519 LLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDV 578

Query: 372 PPNTVTFN 379
             N++  N
Sbjct: 579 LSNSLIKN 586



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 149/298 (50%), Gaps = 8/298 (2%)

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT--TYSALIDGFAKAGNLLGAS 325
           P+V   + L+  LC  G   +A  V       +C P  T  TY AL+DG+ +AG L  A 
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVV-----EACGPEATAATYGALVDGYCRAGLLEDAR 148

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   M ++  + +  A+  ++  LC+      A  +++ M    C P+ VT+N  ++  
Sbjct: 149 RVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAA 208

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C       A++L+D M+   C PN  TYN ++D + R   V +A EL+  +   G + N 
Sbjct: 209 CKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNT 268

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V YNT+L G C     V+A ++L +M+ E    +  T N+II   C++G +      L++
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEK 328

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           +   G    ++++Y +++ G+C  G +  A   L  M + G  P+  T+N +++ L S
Sbjct: 329 MSKHG-CTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCS 385



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 139/273 (50%), Gaps = 4/273 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K  +  V   L++M   G + +   + +VI+     G  + AL++   ++ FG
Sbjct: 309 IINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP +  YN +L  L + +R+     +   M ++   P+  T+N ++   C+   +  A+
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAF 428

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----AMRFGSGVSVYNALINGLC 176
           ++  +M  KGC P++ +Y+TI+  + K G++E+A EL    A +  +   +Y  L   L 
Sbjct: 429 EVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLN 488

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE KIEE   ++ ++ D GI P  + Y+T++  LC  G  + ++ +L  M   GC P+  
Sbjct: 489 KEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDES 548

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           ++  L++G    G + EA +L +R+     L N
Sbjct: 549 TYIILIEGLFYEGYSKEARELLSRLCSRDVLSN 581



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 10/139 (7%)

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++   N ++  +CR G   +A +++     E T   A T+  ++  YC+ G + +A    
Sbjct: 95  DVPLANRLVRDLCRRGRPADAARVVEACGPEAT---AATYGALVDGYCRAGLLEDA---- 147

Query: 504 DRIRGGGEWNPDIIS---YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            R+ GG   +    S   +  L+  +C  G + +A + L  ML  G  P+  T+N+L+++
Sbjct: 148 RRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQA 207

Query: 561 LFSNLGHLGPVYILDDIMA 579
                G+   + ++D + A
Sbjct: 208 ACKGRGYRQALELIDFMRA 226


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/629 (24%), Positives = 293/629 (46%), Gaps = 54/629 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG++        LL  ++ +GV      + S+I +Y   G   +A+ +F ++ E G
Sbjct: 191 IISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEEG 250

Query: 61  LKPTVKIYNHILDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            +PT+  YN IL+        +S I  +  +MK  G+ P+++TYN L+ +  + +  + A
Sbjct: 251 CRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEEA 310

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
            ++  EM   G +PD V+Y  ++    K  +  EA E+     A  F   +  YN+LI+ 
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             ++  ++EA  L  +MV +GI P+V TY+T++S     G  + ++ +  +M V GC PN
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPN 430

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +F +L+K +   G   E   ++  +     +P++V ++TL+     NG   E   V  
Sbjct: 431 ICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK 490

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P   T++ LI  +++ G    A  I+ RM+  G +P++  Y  ++  L +  
Sbjct: 491 EMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGG 550

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ-------------- 400
           ++ Q+  ++ +M    C PN +T+ + +        V+    L ++              
Sbjct: 551 LWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLK 610

Query: 401 ---------------------MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
                                +++    P+ITT N ++    R   V +  E++  I+  
Sbjct: 611 TLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS 670

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   ++ TYN++++   R     ++  +L +++ +G K D I+FN +I+AYC+ G++  A
Sbjct: 671 GFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEA 730

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV- 558
            ++   ++  G   PD+I+Y + +    +     EA   ++ M+     PN  T+N L+ 
Sbjct: 731 SRIFAEMKDFG-LAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLID 789

Query: 559 -----------RSLFSNLGHLGPVYILDD 576
                       S  SNL +L P    D+
Sbjct: 790 WFCKLNRRDEANSFISNLRNLDPSVTKDE 818



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 256/597 (42%), Gaps = 80/597 (13%)

Query: 47  EQALKMFYRIR---EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           E AL +FY +R   +F    +  +   I+  L  E R S    +  +++ DG+  +++ Y
Sbjct: 164 ELALCVFYFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAY 223

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ--VEEARELAMRF 161
             L+ A   N R   A  +  ++  +GC P  ++Y  I++   K+G    + A  +    
Sbjct: 224 TSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMK 283

Query: 162 GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            SGV+     YN LI+   +    EEA  +  EM   G  P+ +TY+ ++          
Sbjct: 284 SSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPR 343

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ +L +M   G  P+I ++ SL+  Y   G   EA +L ++M+++G  P+V  Y+TL+
Sbjct: 344 EAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLL 403

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            G    G  D A+ V  +M    C PN+ T++ALI      GN +   +++  +    C 
Sbjct: 404 SGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECV 463

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM-- 395
           P++V +  ++ V  QN M  +   + ++M      P   TFNT I     CG  D AM  
Sbjct: 464 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAI 523

Query: 396 ---------------------------------KLLDQMKQYECLPNITTYNELLDG--- 419
                                            K+L +MK   C PN  TY  LL     
Sbjct: 524 YRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583

Query: 420 ---LLRVNRVKEAF----------------------ELVTEIEKCGIQL-------NIVT 447
              + R++ + E                        +L+TE E+  ++L       +I T
Sbjct: 584 GKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITT 643

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
            N ++    R  MV +  ++L  +   G      T+N ++Y Y +      +  +L  I 
Sbjct: 644 LNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREII 703

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G   PDIIS+ ++++  C +G M+EA     +M + G+ P+  T+N  + S  S+
Sbjct: 704 AKG-MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASD 759



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/448 (19%), Positives = 198/448 (44%), Gaps = 48/448 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L  QM  +G+      + ++++ + + G  + A+K+F  +R  G +P +  +N 
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNA 436

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMG 127
           ++        F  +  ++  +K     P++ T+N LL    +N   + V G +K   EM 
Sbjct: 437 LIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFK---EMK 493

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGV----SVYNALINGLCKEHKIE 182
             G  P+  ++ T++S+  + G  ++A  +  R   +GV    S YNA++  L +    E
Sbjct: 494 RAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWE 553

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV-------------- 228
           ++  +L EM D    PN +TY +++ +  +   VE    +  +++               
Sbjct: 554 QSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLV 613

Query: 229 ---------------------RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
                                +G +P+I +  +++  Y       + +++ N +   GF 
Sbjct: 614 LVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFT 673

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P++  Y++L++        +++  +  ++      P++ +++ +I  + + G +  AS+I
Sbjct: 674 PSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRI 733

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +  M   G +P+V+ Y   +     ++MF +A  +++ M    C PN  T+N+ I   C 
Sbjct: 734 FAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCK 793

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNE 415
             R D A   +  ++  +  P++T   E
Sbjct: 794 LNRRDEANSFISNLRNLD--PSVTKDEE 819


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 221/447 (49%), Gaps = 5/447 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+QM  +GV+ S       IN Y  +G    A  +   + + G +P       ++  L 
Sbjct: 106 LLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLC 165

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                      + N+   GM  +   Y  L+  LCK  R   A++LL EM  +   P+ V
Sbjct: 166 INGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIV 225

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I+ S CK     +AR+L ++         +  Y +LI G C+  +  E   L+CEM
Sbjct: 226 IYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEM 285

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           V++ I+PNV T++ +I + C  G +  + G+   M  RG  P+I +F +L+ G+ L G  
Sbjct: 286 VNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNV 345

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L++ +   G LP+V +Y+ LI G C    +DEAVS+  +M   +   ++  YS+L
Sbjct: 346 LEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSL 405

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K+G +  A ++++ + ++G  PNV+ Y  ++   C+         L + M  +  
Sbjct: 406 IDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGL 465

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P  +T+N  I G C   R+  AM LL  M+     P+  TYN L DGL +  R+ +A+E
Sbjct: 466 TPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWE 525

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRA 458
           L   +   G  +++ TYN +L   C+A
Sbjct: 526 LFKVMHVGGPPVDVATYNVLLDAFCKA 552



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 245/492 (49%), Gaps = 14/492 (2%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + A+ +F  +      P+V  +N I+ +++      +   +   M   G+ P++FT +I 
Sbjct: 66  DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +   C    +  A+ +L  +  +G  P+ ++ TT++  +C  G+V++    AM F   V+
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQK----AMDFHDNVA 181

Query: 167 V---------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                     Y  LINGLCK  +  +AF LL EM  + + PN++ Y+ II S C      
Sbjct: 182 AQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTC 241

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +  +  ++   G +P+I ++TSL++G+   G+  E   L   M+ +   PNV  ++ LI
Sbjct: 242 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 301

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
              C  G M EA  +   M +    P++ T++ LI G    GN+L A ++++ +   G  
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGIL 361

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+V +YT ++   C+     +A SL  +M  +N   + V +++ I GLC  GR+ +A +L
Sbjct: 362 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
              +      PN+ TYN L+D   ++  +    EL   +   G+   ++TYN +++G C+
Sbjct: 422 FSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCK 481

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           +  + EA  LL  M  +    D+IT+N +    CK G++++A +L   +  GG    D+ 
Sbjct: 482 SKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGP-PVDVA 540

Query: 518 SYTSLLWGICNS 529
           +Y  LL   C +
Sbjct: 541 TYNVLLDAFCKA 552



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 215/409 (52%), Gaps = 5/409 (1%)

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G +PN  T   ++K LC N  V  A      +  +G   D V Y T+++ +CK+G+  
Sbjct: 147 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206

Query: 153 EARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A +L            + +YN +I+  CK+    +A  L  ++VD GIDP+++TY+++I
Sbjct: 207 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 266

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C  G       ++ +M  +  NPN+++F  L+  +   G+  EA  ++N M++ G  
Sbjct: 267 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 326

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P++V ++TLI G C +G++ EA  +   + E    P+V +Y+ LI G+ K   +  A  +
Sbjct: 327 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSL 386

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           +N M       ++V Y+ ++  LC++     A  L   +  +  PPN +T+N  I   C 
Sbjct: 387 FNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCK 446

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
              +D  ++L   M      P + TYN L++G  +  R++EA  L++ ++   +  + +T
Sbjct: 447 IQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSIT 506

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           YN++  G+C++G + +A++L   M + G  +D  T+N+++ A+CK   V
Sbjct: 507 YNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 214/439 (48%), Gaps = 40/439 (9%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N +I  + K      A  LL +MV +G+ P++ T S  I+  C +G +  +  +LG + 
Sbjct: 87  FNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVL 146

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            RG  PN  + T+++KG  + G   +A D  + +  +G L + V Y TLI+GLC  G   
Sbjct: 147 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +A  +  +ME     PN+  Y+ +ID F K      A  ++ +++  G  P+++ YT ++
Sbjct: 207 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 266

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNT-------------------------------- 375
           +  C+   + +   L+ +M  +N  PN                                 
Sbjct: 267 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 326

Query: 376 ---VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
              VTFNT I G C  G V  A KL D + +   LP++ +Y  L+ G  +  R+ EA  L
Sbjct: 327 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSL 386

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             E+    + L+IV Y++++ G+C++G +  A++L   +  +G   + IT+NI+I A+CK
Sbjct: 387 FNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCK 446

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
              ++  I+L   + G G   P +++Y  L+ G C S  ++EA   L  M ++ + P+  
Sbjct: 447 IQDIDMGIELFKLMCGKG-LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSI 505

Query: 553 TWNVLVRSLFSNLGHLGPV 571
           T+N    SLF  L   G +
Sbjct: 506 TYN----SLFDGLCKSGRI 520



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 5/274 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V+ L+ +M  + ++ +   F  +I+++ R G   +A  MF  + + G +P +  +N ++ 
Sbjct: 278 VKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLIS 337

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                        ++  +   G+ P+V++Y IL+   CK  R+D A  L  EM  K    
Sbjct: 338 GHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVL 397

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           D V Y++++  +CK G++  A EL     +      V  YN LI+  CK   I+    L 
Sbjct: 398 DIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELF 457

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M  +G+ P V+TY+ +I+  C    +  ++ +L  M  +   P+  ++ SL  G    
Sbjct: 458 KLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKS 517

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           GR  +A +L+  M   G   +V  Y+ L+   C 
Sbjct: 518 GRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 5/250 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+    K ++   Q +   M   G       F ++I+ +   G   +A K+F  + E G
Sbjct: 300 LIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG 359

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  ++       R      +++ M+   M  ++  Y+ L+  LCK+ R+  A+
Sbjct: 360 ILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAW 419

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGVS----VYNALINGL 175
           +L   + N G  P+ ++Y  ++ + CK+  ++   EL  +  G G++     YN LING 
Sbjct: 420 ELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 479

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +I EA  LL  M  + + P+ ITY+++   LC  G +  +  +   M V G   ++
Sbjct: 480 CKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDV 539

Query: 236 HSFTSLLKGY 245
            ++  LL  +
Sbjct: 540 ATYNVLLDAF 549



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I  Y +    ++A+ +F  +R   +   + +Y+ ++D L    R S    ++S +  DG
Sbjct: 370 LIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDG 429

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             PNV TYNIL+ A CK   +D   +L   M  KG  P  ++Y  +++  CK  ++ EA 
Sbjct: 430 PPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAM 489

Query: 156 EL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L     +         YN+L +GLCK  +I +A+ L   M   G   +V TY+ ++ + 
Sbjct: 490 NLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAF 549

Query: 211 CDVGNV 216
           C   +V
Sbjct: 550 CKAQDV 555



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 6/180 (3%)

Query: 8   KCE-IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           KC+ ID    L  +M+ + +     ++ S+I+   + G    A ++F  I   G  P V 
Sbjct: 376 KCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVI 435

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN ++DA        M   ++  M   G+ P V TYNIL+   CK+ R+  A  LL  M
Sbjct: 436 TYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVM 495

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS---GVSVYNALINGLCKEHKI 181
            +K  APD+++Y ++   +CK G++ +A EL   M  G     V+ YN L++  CK   +
Sbjct: 496 QSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 7/194 (3%)

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
           F +CP       +   G      +D A+ L + +   + LP++  +N ++  ++++    
Sbjct: 48  FSHCPKQNAKILSSFNG------IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCP 101

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A  L+ ++   G+  +I T +  ++  C  G +  AF +LG +L  G + + IT   ++
Sbjct: 102 VAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVM 161

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              C  G+V  A+   D +   G    D + Y +L+ G+C  G   +AF  LQ+M  + +
Sbjct: 162 KGLCINGEVQKAMDFHDNVAAQGML-LDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVV 220

Query: 548 CPNFATWNVLVRSL 561
            PN   +N+++ S 
Sbjct: 221 KPNIVIYNMIIDSF 234


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 274/556 (49%), Gaps = 9/556 (1%)

Query: 1   MIEKLGEKCEI-DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I  L E+ ++ D + +L    KV G S       ++++ + +VGL + A   F  + + 
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKVVGPSIVS--INTIMSKFCKVGLIDVARSXFCLMVKN 300

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           GL      YN +L  L              +M++ G+EP+V TYN L K       + GA
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALING 174
            K++ +M  +G  PD V+YTT++   C++G +EEA +L        F   V  YN L++ 
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +IEEA  L  EM    ++P+ I YS +I  LC  G V+ +  +  QM ++   P+
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +  ++L G    G   EA + ++   R   + +VV Y+ +I G      + EA+ + Y
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYY 540

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M E    P+V T++ LI+GF + G+L+ A ++   +   G  P+VV YT ++   C+  
Sbjct: 541 KMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +    + +M      P  VT+   IKGLC   ++  +++LL+ M     LP+  TYN
Sbjct: 601 NMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++    +   + +A +L   +         VTY  +++ +C  G + +  +++  +   
Sbjct: 661 TIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDR 720

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
              L   T+  II A+C +G+V+ A+   +++   G +   I  Y++++  +C  G + E
Sbjct: 721 NITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKG-FVISIRDYSAVINRLCKRGLITE 779

Query: 535 AFIYLQKMLNEGICPN 550
           A  +   ML+EG+ P+
Sbjct: 780 AKYFFVMMLSEGVTPD 795



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 262/528 (49%), Gaps = 10/528 (1%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           +Y R  +   AL +  ++++   + +V  YN +L  +       ++  +Y+ +K  G   
Sbjct: 179 AYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQ 235

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-- 156
           +  T +IL+  LC+ ++++ A   L +  NK   P  VS  TI+S  CK+G ++ AR   
Sbjct: 236 SECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXF 294

Query: 157 -LAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            L ++ G       YN L++GLC    ++EA     +M   G++P+V+TY+T+      +
Sbjct: 295 CLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLL 354

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +  ++ +M ++G NP++ ++T+L+ G+   G   EA  L    +  GF  NV+ Y
Sbjct: 355 GLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + L+  LC  G ++EA+++  +ME     P+   YS LI G  K G +  A Q++ +M  
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               P+  A   ++  L +N    +A +  +     +   + V +N  I G      +  
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM+L  +M +    P++ T+N L++G  R   + EA +++  I   G+  ++VTY T+++
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             C  G + E F  L +M         +T+ ++I   C+Q K++ ++QLL+ +   G   
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL- 653

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PD ++Y +++   C    + +A      ML     P   T+ VL+ +L
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 254/555 (45%), Gaps = 22/555 (3%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           + SE V   V++  R +         ++ I E+G + ++     +   L  + RF  ++ 
Sbjct: 79  TLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDS 138

Query: 87  IYSNMKRD------------------GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           +  N+  D                    + N   +++L  A  ++  +  A  ++ +M +
Sbjct: 139 VIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKD 198

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKEHKIEEAFW 186
                   +Y +++ ++     + +        G+  S    + LI+GLC++ K+E+A  
Sbjct: 199 LNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAIS 258

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L +  ++ + P++++ +TI+S  C VG ++ +      M   G   +  S+  LL G  
Sbjct: 259 FLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLC 317

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           + G   EA    + M + G  P+VV Y+TL  G    G M  A  V  +M      P++ 
Sbjct: 318 VAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLV 377

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ LI G  + GN+  A ++    +S G   NV+ Y  ++  LC+     +A +L ++M
Sbjct: 378 TYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEM 437

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 P+ + ++  I GLC  G V  A +L +QM+     P+      +L GL +   +
Sbjct: 438 ETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNI 497

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA        +  +  ++V YN ++ G  R   + EA QL  KM+  G     +TFN +
Sbjct: 498 SEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTL 557

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I  +C++G +  A ++L+ IR  G   P +++YT+L+   C  G MQE F +L +M    
Sbjct: 558 INGFCRRGDLMEARKMLEVIRLKG-LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 547 ICPNFATWNVLVRSL 561
           + P   T+ VL++ L
Sbjct: 617 VVPTHVTYTVLIKGL 631



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 154/315 (48%), Gaps = 9/315 (2%)

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H+A  +  +M    F  +V  Y++L+H +     M +   V  +++ +  P +  T S L
Sbjct: 187 HDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWD---VYNEIKVSGAPQSECTTSIL 243

Query: 312 IDGFAKAGNLLGASQIWNRMISNGC-SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           I G  +   L  A    +   SN    P++V+   ++   C+  +   A S    M    
Sbjct: 244 IHGLCEQSKLEDAISFLHD--SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNG 301

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              ++ ++N  + GLC  G +D A+   D M+++   P++ TYN L  G L +  +  A 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++V ++   G+  ++VTY T++ G C+ G + EA +L  + L  G KL+ I +N+++   
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF-IYLQKMLNEGICP 549
           CK G++  A+ L D +       PD I Y+ L+ G+C  G +Q A+ +Y Q  L      
Sbjct: 422 CKVGRIEEALTLFDEMETL-RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 550 NFATWNVLVRSLFSN 564
           +FA   VL+  LF N
Sbjct: 481 HFAQRAVLL-GLFKN 494



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 132/284 (46%), Gaps = 8/284 (2%)

Query: 10  EIDGVQYLLQ---QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            +DG+   +Q   +M   G++ S   F ++IN + R G   +A KM   IR  GL P+V 
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  +++A         +      M+ + + P   TY +L+K LC+ N++  + +LL  M
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKI 181
             KG  PD+V+Y TI+   CK  ++ +A +L               Y  LIN LC    +
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           ++   ++  + DR I     TY TII + C  G V  +LG   QM  +G   +I  ++++
Sbjct: 708 KDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           +      G   EA   +  M+ EG  P+     T+++     G+
Sbjct: 768 INRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGN 811


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 236/463 (50%), Gaps = 14/463 (3%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTY 103
           +  QA+ +FY+I+    +P  + YN ++  L+ E ++  ++ +Y+ M  +G   P+  TY
Sbjct: 141 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTY 200

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK-------LGQVEEARE 156
           + L+ A CK  R D A +LL EM   G  P    YT +++   K       L   EE R 
Sbjct: 201 SALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH 260

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              R    V  Y  LI GL K  +I+EA+   CEM   G  P+ +  + +I+ L   G +
Sbjct: 261 QYCR--PDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRL 318

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           + ++ +  +M    C P++ ++ +++K  +    R  E    + RM   G  P+   YS 
Sbjct: 319 DDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 378

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI G C    M++A+ +  +M+E   PP    Y +LID   KA     A +++  +  N 
Sbjct: 379 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 438

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            S +   Y  M+K L +      A ++ ++M    C P+   +N  + GL   G +D A+
Sbjct: 439 GSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL 498

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
             + +M+++ C+P+I +YN +L+GL +      A E+++ +++  ++ ++V+YNT+L  +
Sbjct: 499 STMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 558

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             AGM  EA +L+ +M   G + D IT++ I+ A    GKV++
Sbjct: 559 SHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI---GKVDH 598



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 224/463 (48%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +++ L     V  A  +  ++  + C P A +Y +++  +   GQ E+  +L     +  
Sbjct: 132 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 191

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+  CK  + + A  LL EM + G+ P    Y+ +I+      +   +
Sbjct: 192 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 251

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L +  +M  + C P++ ++T L++G    GR  EA   +  M REG  P+ V  + +I+ 
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +D+A+ +  +ME   C P+V TY+ +I    ++ +       W  RM  +G SP
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R D A +L 
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 431

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++  L +  R+ +A  +  E+ K G   ++  YN ++ G+ R 
Sbjct: 432 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 491

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           GM+ EA   + +M   G   D  ++NII+    K G  + A+++L  ++      PD++S
Sbjct: 492 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST-VRPDVVS 550

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  + ++G  +EA   +++M   G   +  T++ ++ ++
Sbjct: 551 YNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 593



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 215/450 (47%), Gaps = 14/450 (3%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSI 145
           I+  +K    +P    YN ++  L    + +  ++L  EM  +G C PD V+Y+ ++S+ 
Sbjct: 148 IFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAF 207

Query: 146 CKLGQ-------VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           CKLG+       + E +E+ M+      +Y  LI    K +    A  L  EM  +   P
Sbjct: 208 CKLGRRDSAIQLLNEMKEIGMQ--PTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRP 265

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +V TY+ +I  L   G ++ +     +M   GC P+     +++      GR  +A  L+
Sbjct: 266 DVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLF 325

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPPNVTTYSALIDGFAK 317
             M     +P+VV Y+T+I  L  + S    V   ++ M+E+   P+  TYS LIDGF K
Sbjct: 326 QEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCK 385

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV- 376
              +  A  +   M   G  P   AY  ++  L +   +  A  L +++  ENC  ++  
Sbjct: 386 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK-ENCGSSSAR 444

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            +   IK L   GR+D A+ + D+M +  C P++  YN L+ GL R   + EA   +  +
Sbjct: 445 VYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM 504

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           ++ G   +I +YN IL+G+ + G    A ++L  M     + D +++N ++ A    G  
Sbjct: 505 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMF 564

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
             A +L+  +   G +  D+I+Y+S+L  I
Sbjct: 565 EEASKLMKEMNTLG-FEYDLITYSSILEAI 593



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 210/432 (48%), Gaps = 9/432 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L  + + + V  L  +M  EG    + V + ++I+++ ++G  + A+++   ++E 
Sbjct: 167 MIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEI 226

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++PT KIY  ++      N       ++  M+     P+VFTY  L++ L K  R+D A
Sbjct: 227 GMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEA 286

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
           Y    EM  +GC PD V    +++ + K G++++A +L      +R    V  YN +I  
Sbjct: 287 YHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKA 346

Query: 175 L--CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           L   K    E   W    M + GI P+  TYS +I   C    +E ++ +L +M  +G  
Sbjct: 347 LFESKSRASEVPSWFE-RMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 405

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P   ++ SL+       R   A +L+  +       +   Y+ +I  L   G +D+A+++
Sbjct: 406 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 465

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M +  C P+V  Y+AL+ G A+ G L  A     RM  +GC P++ +Y  ++  L +
Sbjct: 466 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 525

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
               H+A  ++  M      P+ V++NT +  L   G  + A KL+ +M       ++ T
Sbjct: 526 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLIT 585

Query: 413 YNELLDGLLRVN 424
           Y+ +L+ + +V+
Sbjct: 586 YSSILEAIGKVD 597



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 220/479 (45%), Gaps = 11/479 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQ 150
           KR   E +  TY  L+  L    +    +K++ EM  N  C       + +V  +     
Sbjct: 82  KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKM 141

Query: 151 VEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYS 204
           V +A  +  +  +         YN++I  L  E + E+   L  EM   G   P+ +TYS
Sbjct: 142 VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 201

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +IS+ C +G  ++++ +L +M   G  P    +T L+  +      H A  L+  M  +
Sbjct: 202 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 261

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
              P+V  Y+ LI GL   G +DEA     +M+   C P+    + +I+   KAG L  A
Sbjct: 262 YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDA 321

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQN-NMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
            +++  M +  C P+VV Y  ++K L ++ +   +  S  E+M      P++ T++  I 
Sbjct: 322 MKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILID 381

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQ 442
           G C   R++ AM LL++M +    P    Y  L+D L +  R   A EL  E+ E CG  
Sbjct: 382 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 441

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
              V Y  ++  + +AG + +A  +  +M   G   D   +N ++    + G ++ A+  
Sbjct: 442 SARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 500

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + R++  G   PDI SY  +L G+  +GG   A   L  M    + P+  ++N ++ +L
Sbjct: 501 MRRMQEHG-CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGAL 558



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 40/254 (15%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K     V    ++MK  G+S S   +  +I+ + +    E+A+ +   + E G  P    
Sbjct: 351 KSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 410

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++DAL    R+ +   ++  +K +    +   Y +++K L K  R+D A  +  EM 
Sbjct: 411 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 470

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCK---EH 179
             GCAPD  +Y  ++S + + G ++EA     R         ++ YN ++NGL K    H
Sbjct: 471 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 530

Query: 180 K--------------------------------IEEAFWLLCEMVDRGIDPNVITYSTII 207
           +                                 EEA  L+ EM   G + ++ITYS+I+
Sbjct: 531 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSIL 590

Query: 208 SSLCDVGNVETSLG 221
            ++  V +  T  G
Sbjct: 591 EAIGKVDHEYTDQG 604



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           + +TY ALI             ++   M+ N  C       + +V++L    M  QA ++
Sbjct: 89  DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITI 148

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLL 421
             ++    C P    +N+ I  L   G+ +   +L ++M  +  C P+  TY+ L+    
Sbjct: 149 FYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFC 208

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           ++ R   A +L+ E+++ G+Q     Y  ++    +      A  L  +M  +  + D  
Sbjct: 209 KLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVF 268

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+  +I    K G+++ A      ++  G   PD +   +++  +  +G + +A    Q+
Sbjct: 269 TYTELIRGLGKAGRIDEAYHFFCEMQREG-CRPDTVFMNNMINFLGKAGRLDDAMKLFQE 327

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           M      P+  T+N ++++LF +
Sbjct: 328 METLRCIPSVVTYNTIIKALFES 350



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 9/209 (4%)

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C       +  ++ L     V  A+ +  Q+K  +C P    YN ++  L+   + ++  
Sbjct: 122 CVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVH 181

Query: 431 ELVTEIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           +L  E+   G    + VTY+ ++   C+ G    A QLL +M   G +     + ++I  
Sbjct: 182 QLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIAL 241

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           + K    + A+ L + +R      PD+ +YT L+ G+  +G + EA+ +  +M  EG  P
Sbjct: 242 FFKFNDAHGALSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRP 300

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           +     V + ++ + LG  G    LDD M
Sbjct: 301 D----TVFMNNMINFLGKAGR---LDDAM 322



 Score = 45.4 bits (106), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 13/175 (7%)

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           WA K     + YE   + +TY  L+  L  V +  E ++++ E+ +  I    V   T L
Sbjct: 79  WAAK----RRNYE--HDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPI---CVVTPTEL 129

Query: 453 HGVCR----AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             V R    A MV +A  +  ++     +  A  +N +I     +G+     QL + +  
Sbjct: 130 SDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST 189

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            G   PD ++Y++L+   C  G    A   L +M   G+ P    + +L+   F 
Sbjct: 190 EGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFK 244


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 244/516 (47%), Gaps = 7/516 (1%)

Query: 51  KMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP-NVFTYNILLKA 109
           + F  +   G +P    +N  + A +A         +   M RDG  P N F+YN+++  
Sbjct: 150 RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 209

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSG 164
           + +  R   A ++  EM  +   P+ ++Y T++    K G +E    L  +         
Sbjct: 210 MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPN 269

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN L++GLC+  ++ E   LL EM  + + P+  TYS +   L   G+ +  L + G
Sbjct: 270 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 329

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +    G     ++ + LL G    G+   A ++   ++  G +P  V Y+TLI+G C  G
Sbjct: 330 KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 389

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            ++ A S   QM+     P+  TY+ALI+G  KA  +  A  +   M  NG +P V  + 
Sbjct: 390 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 449

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++    +     +   ++ +M      PN V++ + +   C  G++  A+ +LD M   
Sbjct: 450 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 509

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           + LPN   YN ++D  +      +AF LV +++  GI  +IVTYN ++ G+C    + EA
Sbjct: 510 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +++  +       DA+++N +I A C +G ++ A+ L  R+   G     + +Y  L+ 
Sbjct: 570 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG-IKSTVRTYHQLIS 628

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           G+  +G + E     QKM+   + P+ A  N++V +
Sbjct: 629 GLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 664



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 229/469 (48%), Gaps = 7/469 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P++ + N+LL+AL    R     +    + + G  PD  ++   V +    G + EA  +
Sbjct: 127 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 186

Query: 158 AMRFGSGVS------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             R G   +       YN +I G+ +  +  +A  +  EM +R + PN ITY+T+I    
Sbjct: 187 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 246

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G++E    +  QM   G  PN  ++  LL G    GR  E S L + M  +  +P+  
Sbjct: 247 KGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 306

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            YS L  GL  NG     +S+  +  +N       T S L++G  K G +  A ++   +
Sbjct: 307 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 366

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           ++ G  P  V Y  ++   CQ      A S   +M   +  P+ +T+N  I GLC   R+
Sbjct: 367 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 426

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  LL +M+     P + T+N L+D   R  ++++ F +++E+++ G++ N+V+Y +I
Sbjct: 427 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 486

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           ++  C+ G + EA  +L  M  +    +A  +N II AY + G  + A  L+++++  G 
Sbjct: 487 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG- 545

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +P I++Y  L+ G+CN   + EA   +  + N  + P+  ++N L+ +
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 594



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 41/497 (8%)

Query: 17  LLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L++M  +G        +  VI    R G    A+++F  + E  + P    YN ++D  
Sbjct: 186 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 245

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +          +   M   G++PN  TYN+LL  LC+  R+     LL EM ++   PD 
Sbjct: 246 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 305

Query: 136 VSYTTI-----------------------------------VSSICKLGQVEEARE-LAM 159
            +Y+ +                                   ++ +CK G+V  A E L  
Sbjct: 306 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365

Query: 160 RFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              +G+     +YN LING C+  ++E AF    +M  R I P+ ITY+ +I+ LC    
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  +  +L +M   G NP + +F +L+  Y   G+  +   + + M   G  PNVV+Y +
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++  C NG + EAV++   M      PN   Y+A+ID + + G    A  +  +M SNG
Sbjct: 486 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            SP++V Y  ++K LC  +   +A  +I  ++     P+ V++NT I   C  G +D A+
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L  +M +Y     + TY++L+ GL    R+ E   L  ++ +  +  +   +N ++   
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665

Query: 456 CRAGMVVEAFQLLGKML 472
            + G  ++A  L  +ML
Sbjct: 666 SKYGNEIKAEDLRKEML 682



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 179/365 (49%), Gaps = 5/365 (1%)

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP-NVVA 272
            +V  + GIL      G  P+  ++   ++  +  G   EA  +  RM R+G  P N  +
Sbjct: 146 ADVRRAFGILASA---GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ +I G+   G   +AV V  +M E +  PN  TY+ +IDG  K G+L    ++ ++M+
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G  PN + Y  ++  LC+     +  +L+++MA +   P+  T++    GL   G   
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             + L  +  +        T + LL+GL +  +V  A E++  +   G+    V YNT++
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G C+ G +  AF   G+M     K D IT+N +I   CK  ++ NA  LL  ++  G  
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG-V 441

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
           NP + ++ +L+     +G +++ FI L +M   G+ PN  ++  +V +   N      V 
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 501

Query: 573 ILDDI 577
           ILDD+
Sbjct: 502 ILDDM 506



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 179/392 (45%), Gaps = 5/392 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M  + +      +  + +   R G ++  L +F +  + G+       + +L+ L 
Sbjct: 292 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 351

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + + S+   +  ++   G+ P    YN L+   C+   ++GA+    +M ++   PD +
Sbjct: 352 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 411

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +CK  ++  A++L M          V  +N LI+   +  ++E+ F +L EM
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G+ PNV++Y +I+++ C  G +  ++ IL  MF +   PN   + +++  Y+  G  
Sbjct: 472 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 531

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L  +M   G  P++V Y+ LI GLC+   + EA  +   +  +   P+  +Y+ L
Sbjct: 532 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 591

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I      GN+  A  +  RM   G    V  Y  ++  L      ++   L +KM   N 
Sbjct: 592 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 651

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            P+    N  ++     G    A  L  +M Q
Sbjct: 652 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 147/292 (50%), Gaps = 5/292 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++G      QMK   +      + ++IN   +      A  +   +++ G+ PTV+ +N
Sbjct: 390 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 449

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA     +      + S M+ +G++PNV +Y  ++ A CKN ++  A  +L +M +K
Sbjct: 450 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 509

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
              P+A  Y  I+ +  + G  ++A  L  +  S G+S     YN LI GLC + +I EA
Sbjct: 510 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             ++  + +  + P+ ++Y+T+IS+ C  GN++ +L +  +M   G    + ++  L+ G
Sbjct: 570 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 629

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
               GR +E   L+ +M++   +P+   ++ ++      G+  +A  +  +M
Sbjct: 630 LGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 5/269 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   I   Q LL +M+  GV+ +   F ++I++Y R G  E+   +   ++E G
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 475

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y  I++A     +      I  +M    + PN   YN ++ A  ++   D A+
Sbjct: 476 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 535

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
            L+ +M + G +P  V+Y  ++  +C   Q+ EA E+       R       YN LI+  
Sbjct: 536 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 595

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I++A  L   M   GI   V TY  +IS L   G +     +  +M      P+ 
Sbjct: 596 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN 655

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
                +++ Y   G   +A DL   M+++
Sbjct: 656 AIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684


>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 794

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/619 (24%), Positives = 291/619 (47%), Gaps = 54/619 (8%)

Query: 5   LGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT 64
           LG+   +     LL  ++ +G       + S+I +Y        ALK+F +++E G +PT
Sbjct: 154 LGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPT 213

Query: 65  VKIYNHILDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           +  YN IL+        ++ I  +  +MK  G+ P++ TYN L+      +  + A  L 
Sbjct: 214 LITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLF 273

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKE 178
            E+   G  PDAV+Y  ++    K  + +EA E+  +     F   V  YN+L++   + 
Sbjct: 274 EEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRG 333

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             +E+A  L  +MVD+GI P+V TY+T++S   + G  E ++ +  +M   GC PNI +F
Sbjct: 334 GLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTF 393

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+K Y   G+  E   ++  +      P++V ++TL+     NG   E   V  +M+ 
Sbjct: 394 NALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKR 453

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P   T++ LI  + + G+   A   + RM+  G SP++  Y  ++  L +  ++ Q
Sbjct: 454 SRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQ 513

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ-----MKQYECL------ 407
           +  ++ +M    C PN VT+++ +        V+    L ++     +K +  L      
Sbjct: 514 SEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVL 573

Query: 408 ------------------------PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
                                   P++TT N +L    R   V +A E++  + + G+ L
Sbjct: 574 VNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTL 633

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++ +YN++++   R     ++ Q+  ++L +G + D I++NI+IYAYC+   ++ A +++
Sbjct: 634 SLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRII 693

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR---- 559
           + ++      PD+++Y + +          EA   ++ M+ +G  PN  T+N +V     
Sbjct: 694 EEMKVPAPV-PDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCK 752

Query: 560 --------SLFSNLGHLGP 570
                   S   NLG L P
Sbjct: 753 LKLRDEACSFVQNLGDLDP 771



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/531 (24%), Positives = 239/531 (45%), Gaps = 46/531 (8%)

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           I+  L    R S    +  N++ DG E +V+ Y  L+ A   N +   A K+  +M   G
Sbjct: 150 IVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVG 209

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAM-------RFGSGVSVYNALINGLCKEHKIEE 183
           C P  ++Y  I++   K+G +  A+ +A+            +  YN LI+        EE
Sbjct: 210 CEPTLITYNAILNVYGKMG-MPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEE 268

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  L  E+   G  P+ +TY+ ++         + ++ +L QM      P++ ++ SL+ 
Sbjct: 269 ALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVS 328

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            Y+ GG   +A  L  +M+ +G  P+V  Y+TL+ G  + G  + A+ V  +M +  C P
Sbjct: 329 AYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKP 388

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N+ T++ALI  +   G      +++  +    CSP++V +  ++ V  QN M  +   + 
Sbjct: 389 NICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVF 448

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           E+M      P   TFNT I     CG  D AM    +M +    P+++TYN +L  L R 
Sbjct: 449 EEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARG 508

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT------- 476
              +++ +++ E++  G + N VTY+++LH     G  VE    L + +  GT       
Sbjct: 509 GLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAYAN-GREVERMNALAEEIYSGTIKTHAVL 567

Query: 477 -----------------------------KLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
                                          D  T N ++  Y ++  V  A ++L+ + 
Sbjct: 568 LKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMY 627

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             G     + SY SL++    +    ++    +++L++GI P+  ++N+++
Sbjct: 628 ESG-LTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVI 677



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 196/397 (49%), Gaps = 4/397 (1%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           SV   +++ L K  ++  A  LL  +   G + +V  Y+++I++  +      +L + G+
Sbjct: 145 SVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGK 204

Query: 226 MFVRGCNPNIHSFTSLLKGY-LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           M   GC P + ++ ++L  Y  +G    +   L   M   G  P++  Y+TLI   C  G
Sbjct: 205 MKEVGCEPTLITYNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLI-SCCRAG 263

Query: 285 SM-DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           S+ +EA+ +  +++     P+  TY+AL+D + K+     A ++  +M SN   P+VV Y
Sbjct: 264 SLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTY 323

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             +V    +  +   A  L  KM  +   P+  T+ T + G    G+ + AM++ ++M++
Sbjct: 324 NSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRK 383

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
             C PNI T+N L+       + +E  ++  EI+ C    +IVT+NT+L    + GM  E
Sbjct: 384 VGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSE 443

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
              +  +M       +  TFN +I AY + G  + A+    R+   G  +PD+ +Y ++L
Sbjct: 444 VSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAG-VSPDLSTYNAVL 502

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
             +   G  +++   L +M + G  PN  T++ L+ +
Sbjct: 503 ATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHA 539



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/373 (23%), Positives = 173/373 (46%), Gaps = 9/373 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIRE 58
           +I+  G++ + + +  + +++KV    CS  +    +++  + + G+  +   +F  ++ 
Sbjct: 396 LIKMYGDRGKFEEMVKVFKEIKV--CKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKR 453

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
               P    +N ++ A      F      Y  M   G+ P++ TYN +L  L +    + 
Sbjct: 454 SRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQ 513

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-VSVYNALINGL-- 175
           + K+L EM + GC P+ V+Y++++ +     +VE    LA    SG +  +  L+  L  
Sbjct: 514 SEKVLAEMKDGGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVL 573

Query: 176 --CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
              K   + E      E   RGI P+V T + ++S       V  +  IL  M+  G   
Sbjct: 574 VNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTL 633

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ S+ SL+  Y      H++  ++  ++ +G  P+V++Y+ +I+  C N  MDEA  + 
Sbjct: 634 SLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRII 693

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+  +  P+V TY+  I  +A     + A  +   MI  GC PN   Y  +V   C+ 
Sbjct: 694 EEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKL 753

Query: 354 NMFHQAHSLIEKM 366
            +  +A S ++ +
Sbjct: 754 KLRDEACSFVQNL 766



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 7/289 (2%)

Query: 276 LIHGLCSNGSMDEAVSV-SYQMEENSCPP--NVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           +I GL  N   D A+S+  +    N      N +  + ++    K G +  A+ + + + 
Sbjct: 112 IIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLE 171

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           ++G   +V  YT ++     N  +  A  +  KM    C P  +T+N  +      G + 
Sbjct: 172 ADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMG-MP 230

Query: 393 WA--MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           WA  + L+  MK +   P++ TYN L+      +  +EA +L  EI+  G + + VTYN 
Sbjct: 231 WAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNA 290

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L    ++    EA ++L +M     +   +T+N ++ AY + G + +A+ L  ++   G
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG 350

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
              PD+ +YT+LL G  N+G  + A    ++M   G  PN  T+N L++
Sbjct: 351 -IKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIK 398


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 217/401 (54%), Gaps = 14/401 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++MK E    +E +F+S+   Y RV     A+++F+++  F L+PT K Y  ILD L+
Sbjct: 72  MLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILV 131

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR-VDGAYKLLVEMGNKGCAPDA 135
            EN        Y  M+  G+  +V + NIL+KALCKN   VD A ++  EM N+GC PD+
Sbjct: 132 EENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDS 191

Query: 136 VSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            +Y T+++ +C+LG + EA+EL        F + V  Y +LI+GLC+ + ++EA  LL E
Sbjct: 192 YTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEE 251

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M    I+PNV TYS+++  LC  G+   ++ +L  M  +   PN+ ++++L+ G     +
Sbjct: 252 MKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERK 311

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS- 309
             EA ++ +RM  +G  PN   Y  +I GLC+ GS  EA +   +M      PN  ++S 
Sbjct: 312 LREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSL 371

Query: 310 ------ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
                  ++ G     +   A Q++  M +   S  +  + C+VK  C+    H+A  ++
Sbjct: 372 HVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARIL 431

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM-KLLDQMKQ 403
           E+M  + C P+   +N  I GL    +V  A  +LL +++Q
Sbjct: 432 EEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQ 472



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 214/448 (47%), Gaps = 25/448 (5%)

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           D   A N F      Y N  R   E    T+ +++  L   N+   A  +L  M  + C 
Sbjct: 27  DVHKAVNMFDSATAEYGNGFRHDHE----TFGLIISRLVTVNQFRPAEGMLERMKQEKC- 81

Query: 133 PDAVSYTTIVSSICK-LGQVEEARELAMRFGS--------GVSVYNALINGLCKEHKIEE 183
              +    I  SIC+  G+V    +    F              Y  +++ L +E+ ++ 
Sbjct: 82  ---MVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKR 138

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           A     EM + GI  +V++ + +I +LC +   V+++L I  +M  RGC P+ +++ +L+
Sbjct: 139 AIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLI 198

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    G   EA +L+  M ++GF  +VV Y++LIHGLC + ++DEA+ +  +M+ N   
Sbjct: 199 NGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIE 258

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PNV TYS+L+DG  K G+   A Q+   M      PN+V Y+ ++  LC+     +A  +
Sbjct: 259 PNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEI 318

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN-------ITTYNE 415
           +++M  +   PN   +   I GLC  G    A   +D+M      PN       +  +N 
Sbjct: 319 LDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNM 378

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++ GL        AF+L   +    I + I T++ ++   C+ G + +A ++L +M+++G
Sbjct: 379 VVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDG 438

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLL 503
              D   +N++I     + KV  A + L
Sbjct: 439 CIPDEGVWNVVIGGLWDRKKVREATEQL 466



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 191/408 (46%), Gaps = 50/408 (12%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL---- 257
           T+  IIS L  V     + G+L +M    C      F S+ +GY   GR H   D     
Sbjct: 52  TFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGY---GRVHRPLDAIRVF 108

Query: 258 ---------------------------------WNRMIREGFLPN-VVAYSTLIHGLCSN 283
                                            + R +RE  +P+ VV+ + LI  LC N
Sbjct: 109 HKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKN 168

Query: 284 G-SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
             ++D A+ +  +M    C P+  TY  LI+G  + GN+  A +++  M   G S +VV 
Sbjct: 169 KETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVT 228

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           YT ++  LCQ+N   +A  L+E+M   +  PN  T+++ + GLC  G    AM+LL+ M 
Sbjct: 229 YTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMD 288

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +   LPN+ TY+ L++GL +  +++EA E++  +   G++ N   Y  I+ G+C AG   
Sbjct: 289 KKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQ 348

Query: 463 EAFQLLGKMLIEGTKLDAITF-------NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           EA   + +M++ G   +  ++       N+++   C       A QL   +R     + +
Sbjct: 349 EAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRC-ISVE 407

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           I ++  L+   C  G + +A   L++M+ +G  P+   WNV++  L+ 
Sbjct: 408 IDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWD 455



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 212/455 (46%), Gaps = 19/455 (4%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLL----VEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           P   T +++++ +     V  A  +      E GN G   D  ++  I+S +  + Q   
Sbjct: 10  PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGN-GFRHDHETFGLIISRLVTVNQFRP 68

Query: 154 ARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A  +  R           ++ ++  G  + H+  +A  +  +M    + P    Y TI+ 
Sbjct: 69  AEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILD 128

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS-DLWNRMIREGFL 267
            L +  +V+ ++G   +M   G   ++ S   L+K       T +++  ++  M   G  
Sbjct: 129 ILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQ 188

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+   Y TLI+GLC  G++ EA  +  +ME+     +V TY++LI G  ++ NL  A  +
Sbjct: 189 PDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGL 248

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
              M  N   PNV  Y+ ++  LC+     QA  L+E M  ++  PN VT++T I GLC 
Sbjct: 249 LEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCK 308

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ----- 442
             ++  A+++LD+M+     PN   Y +++ GL      +EA   + E+   GI      
Sbjct: 309 ERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRAS 368

Query: 443 --LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             L++  +N ++ G+C       AFQL   M      ++  TF+ ++  +CK+G ++ A 
Sbjct: 369 WSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAA 428

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
           ++L+ +   G   PD   +  ++ G+ +   ++EA
Sbjct: 429 RILEEMVLDG-CIPDEGVWNVVIGGLWDRKKVREA 462



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 157/314 (50%), Gaps = 5/314 (1%)

Query: 252 HEASDLWNRMIRE---GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           H+A ++++    E   GF  +   +  +I  L +      A  +  +M++  C      +
Sbjct: 29  HKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIF 88

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
            ++  G+ +    L A +++++M      P   AY  ++ +L + N   +A     +M  
Sbjct: 89  LSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRE 148

Query: 369 ENCPPNTVTFNTFIKGLCGCGR-VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
              P + V+ N  IK LC     VD A+++  +M    C P+  TY  L++GL R+  + 
Sbjct: 149 LGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNIS 208

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA EL  E+E+ G   ++VTY +++HG+C++  + EA  LL +M     + +  T++ ++
Sbjct: 209 EAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLM 268

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              CK G  + A+QLL+ +       P++++Y++L+ G+C    ++EA   L +M  +G+
Sbjct: 269 DGLCKGGHSSQAMQLLE-VMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGL 327

Query: 548 CPNFATWNVLVRSL 561
            PN   +  ++  L
Sbjct: 328 KPNAGLYGKIISGL 341



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 12/296 (4%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K  +D    + Q+M   G       + ++IN   R+G   +A ++F  + + G   +V  
Sbjct: 169 KETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVT 228

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++  L   N       +   MKR+ +EPNVFTY+ L+  LCK      A +LL  M 
Sbjct: 229 YTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMD 288

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIE 182
            K   P+ V+Y+T+++ +CK  ++ EA E+  R           +Y  +I+GLC     +
Sbjct: 289 KKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQ 348

Query: 183 EAFWLLCEMVDRGIDPNVITYS-------TIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           EA   + EMV  GI PN  ++S        ++  LC+  +   +  +   M  R  +  I
Sbjct: 349 EAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEI 408

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            +F  L+K +   G  H+A+ +   M+ +G +P+   ++ +I GL     + EA  
Sbjct: 409 DTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATE 464



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 9/252 (3%)

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           NG   +   +  ++  L   N F  A  ++E+M  E C    VT + F+    G GRV  
Sbjct: 44  NGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKC---MVTEDIFLSICRGYGRVHR 100

Query: 394 ---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              A+++  +M+ ++  P    Y  +LD L+  N VK A     E+ + GI  ++V+ N 
Sbjct: 101 PLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNI 160

Query: 451 ILHGVCRAGMVVE-AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           ++  +C+    V+ A ++  +M   G + D+ T+  +I   C+ G ++ A +L   +   
Sbjct: 161 LIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQK 220

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           G ++  +++YTSL+ G+C S  + EA   L++M    I PN  T++ L+  L    GH  
Sbjct: 221 G-FSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKG-GHSS 278

Query: 570 PVYILDDIMANK 581
               L ++M  K
Sbjct: 279 QAMQLLEVMDKK 290



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 23/256 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   +D    LL++MK   +  +   + S+++   + G + QA+++   + +  
Sbjct: 232 LIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKH 291

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  Y+ +++ L  E +      I   M+  G++PN   Y  ++  LC       A 
Sbjct: 292 HLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAA 351

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
             + EM   G +P+  S++                         V ++N ++ GLC    
Sbjct: 352 NFIDEMVLGGISPNRASWSL-----------------------HVRMHNMVVQGLCNNVD 388

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
              AF L   M  R I   + T+  ++   C  G++  +  IL +M + GC P+   +  
Sbjct: 389 PPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNV 448

Query: 241 LLKGYLLGGRTHEASD 256
           ++ G     +  EA++
Sbjct: 449 VIGGLWDRKKVREATE 464


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 245/513 (47%), Gaps = 41/513 (7%)

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
            G+KP   I N ++++L      +    +   M + G+EP+V T+ IL+  LC    V  
Sbjct: 105 LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGR 164

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALIN 173
           A +L+  +   G   D  +Y  +++ +CK+G+  EA    R++  R +   V VY+ +++
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           GLCK+  + EA  L  EM  +GI PN++TY+ +I  LC+ G  + +  +L +M   G  P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ S   L+      G+  +A  +   MI  G +P+V  Y++LI   C    MDEA  V 
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
             M    C P++  Y++LI G+ K  N+  A  + + MI  G +P+VV +T         
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWT--------- 395

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                                     T I G C  GR   A +L   M +Y  +PN+ T 
Sbjct: 396 --------------------------TLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTC 429

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
             +LDGL +   + EA  L   +EK  + LNIV Y+ IL G+C AG +  A +L   +  
Sbjct: 430 AIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPA 489

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           +G +++   + I+I  + KQG ++ A  LL  +   G   PD  +Y   + G+     + 
Sbjct: 490 KGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENG-CMPDSCTYNVFVQGLVAEREIA 548

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
            +  YL  M ++G   +  T  +++  L +N G
Sbjct: 549 RSIKYLTMMRDKGFSVDATTTEMIINYLSTNQG 581



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 227/482 (47%), Gaps = 7/482 (1%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSIC 146
           +  M +    P+V  + +LL  + K      A  L+ EM +  G  PD      +++S+C
Sbjct: 63  FHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLC 122

Query: 147 KLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
            L  V          L +     V  +  LINGLC +  +  A  L+  +   G   +V 
Sbjct: 123 HLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVK 182

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY  +I+ LC +G    ++G L +M  R  NPN+  +++++ G    G   EA  L   M
Sbjct: 183 TYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEM 242

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G  PN+V Y+ LI GLC+ G   EA S+  +M +    P++ + + L+D   K G +
Sbjct: 243 SGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKI 302

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
           + A  +   MI  G  P+V  Y  ++   C  N   +A  + E M    C P+ V + + 
Sbjct: 303 MQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSL 362

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I G C    ++ AM LLD+M +    P++ T+  L+ G  +V R   A EL   + K G 
Sbjct: 363 IHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQ 422

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             N+ T   IL G+C++ ++ EA  L   M      L+ + ++II+   C  GK+N A++
Sbjct: 423 VPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALE 482

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L   +   G    ++ +YT ++ G    G + +A   L  M   G  P+  T+NV V+ L
Sbjct: 483 LFSCLPAKG-LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGL 541

Query: 562 FS 563
            +
Sbjct: 542 VA 543



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 239/471 (50%), Gaps = 18/471 (3%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VINS   + L      +   + + GL+P+V  +  +++ L  +        +  ++++ G
Sbjct: 117 VINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTG 176

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
              +V TY +L+  LCK  +   A   L +M  +   P+ V Y+T++  +CK G V EA 
Sbjct: 177 YRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEAL 236

Query: 156 ELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L +   G G+      Y  LI GLC   + +EA  LL EM+  G+ P++ + + ++  L
Sbjct: 237 GLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVL 296

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G +  +  ++G M + G  P++ ++ SL+  Y L  +  EA+ ++  M+  G LP++
Sbjct: 297 CKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDI 356

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           VAY++LIHG C   ++++A+ +  +M +    P+V T++ LI GF + G  L A +++  
Sbjct: 357 VAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLN 416

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G  PN+     ++  LC++ +  +A SL   M   N   N V ++  + G+C  G+
Sbjct: 417 MHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476

Query: 391 VDWAMKLLDQMKQYECLP------NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           ++ A++L      + CLP      N+  Y  +++G  +   + +A +L++ +E+ G   +
Sbjct: 477 LNTALEL------FSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPD 530

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII-YAYCKQG 494
             TYN  + G+     +  + + L  M  +G  +DA T  +II Y    QG
Sbjct: 531 SCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQG 581



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 209/408 (51%), Gaps = 5/408 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K ++     L+  ++  G       +  +IN   ++G   +A+    ++ E  
Sbjct: 152 LINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERN 211

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V +Y+ ++D L  +   S    +   M   G++PN+ TY  L++ LC   R   A 
Sbjct: 212 WNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAG 271

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGS--GVSVYNALINGL 175
            LL EM   G  PD  S   +V  +CK G++ +A+ +    +  G    V  YN+LI+  
Sbjct: 272 SLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 331

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C +++++EA  +   MV RG  P+++ Y+++I   C + N+  ++ +L +M   G  P++
Sbjct: 332 CLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDV 391

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+L+ G+   GR   A +L+  M + G +PN+   + ++ GLC +  + EA+S+ + 
Sbjct: 392 VTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHA 451

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ME+++   N+  YS ++DG   AG L  A ++++ + + G   NV AYT M+    +  +
Sbjct: 452 MEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGL 511

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             +A  L+  M    C P++ T+N F++GL     +  ++K L  M+ 
Sbjct: 512 LDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRD 559



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 208/434 (47%), Gaps = 5/434 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G+  S   F  +IN     G   +A+++   + + G +  VK Y  +++ L    + S  
Sbjct: 141 GLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEA 200

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS 144
                 M+     PNV  Y+ ++  LCK+  V  A  L +EM  KG  P+ V+YT ++  
Sbjct: 201 VGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQG 260

Query: 145 ICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           +C  G+ +EA  L    M+ G    +   N L++ LCKE KI +A  ++  M+  G  P+
Sbjct: 261 LCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V TY+++I   C    ++ +  +   M  RGC P+I ++TSL+ G+      ++A  L +
Sbjct: 321 VFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLD 380

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MI+ GF P+VV ++TLI G C  G    A  +   M +    PN+ T + ++DG  K+ 
Sbjct: 381 EMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQ 440

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L  A  +++ M  +    N+V Y+ ++  +C     + A  L   +  +    N   + 
Sbjct: 441 LLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYT 500

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I G    G +D A  LL  M++  C+P+  TYN  + GL+    +  + + +T +   
Sbjct: 501 IMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDK 560

Query: 440 GIQLNIVTYNTILH 453
           G  ++  T   I++
Sbjct: 561 GFSVDATTTEMIIN 574



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 42/270 (15%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P V  YN ++D    +N+      ++  M   G  P++  Y  L+   CK   ++ A
Sbjct: 316 GEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKA 375

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM---RFGS------------- 163
             LL EM   G  PD V++TT++   C++G+   A+EL +   ++G              
Sbjct: 376 MHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDG 435

Query: 164 ------------------------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                                    + +Y+ +++G+C   K+  A  L   +  +G+  N
Sbjct: 436 LCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQIN 495

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V  Y+ +I+     G ++ +  +L  M   GC P+  ++   ++G L+  R    S  + 
Sbjct: 496 VYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG-LVAEREIARSIKYL 554

Query: 260 RMIRE-GFLPNVVAYSTLIHGLCSNGSMDE 288
            M+R+ GF  +      +I+ L +N   +E
Sbjct: 555 TMMRDKGFSVDATTTEMIINYLSTNQGDNE 584



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 61/141 (43%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M+   +  +  ++  +++     G    AL++F  +   GL+  V  Y  +++   
Sbjct: 448 LFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFA 507

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +        + SNM+ +G  P+  TYN+ ++ L     +  + K L  M +KG + DA 
Sbjct: 508 KQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDAT 567

Query: 137 SYTTIVSSICKLGQVEEAREL 157
           +   I++ +       E RE 
Sbjct: 568 TTEMIINYLSTNQGDNELREF 588


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 264/553 (47%), Gaps = 10/553 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  M+  G+S     + +++N++ R G+  +A  +  R++  G+ PT   YN ++ A   
Sbjct: 231 LSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFAR 290

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA-PDAV 136
                    +  +M   G EP++ TYN+L   LC+  +VD A++L  EM     A PD V
Sbjct: 291 LGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVV 350

Query: 137 SYTTIVSSICK-------LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +Y T+V +  K       L  +EE R+  ++    +  +N ++  LCKE K+EEA   L 
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDKGVK--PTLVTHNIVVKSLCKEGKLEEALGKLE 408

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           ++ + G+ P+VITY+T+I + C  GNV  +  ++ +M  +G   +  +  ++L       
Sbjct: 409 KIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMK 468

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  +A +L +   + GF+P+ V+Y T++       + + A+ +  QM E    P+++TY+
Sbjct: 469 RYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYN 528

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI G  +   L  A    N ++  G  P+   Y  ++   C+      A     KM   
Sbjct: 529 TLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVEN 588

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           +  P+ VT NT + GLC  G++D A+KL +   +     ++ TYN L+  + +V  V  A
Sbjct: 589 SFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTA 648

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                ++E  G+Q +  TYN +L  +  AG   EA  +L K+   G    +    ++  +
Sbjct: 649 LHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPS 708

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
              +  V       +        +  + +Y   L G+C  G ++EA   L +M+ +G+  
Sbjct: 709 SADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPV 768

Query: 550 NFATWNVLVRSLF 562
           + +T+  L+  L 
Sbjct: 769 DSSTYITLMEGLI 781



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 251/524 (47%), Gaps = 42/524 (8%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL +MK +G++ ++  + ++++++ R+G  +QA K+   +  +G +P ++ YN +  
Sbjct: 262 ARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAV 321

Query: 74  ALLAENRFSMINPIYSNMKRDGME-PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
            L    +      +   M+R     P+V TYN L+ A  K      A +LL EM +KG  
Sbjct: 322 GLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVK 381

Query: 133 PDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWL 187
           P  V++  +V S+CK G++EEA     ++A       V  YN LI+  CK   + +AF L
Sbjct: 382 PTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTL 441

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           + EMV +G+  +  T +T++ +LC +   E +  +L     RG  P+  S+ +++  Y  
Sbjct: 442 MDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFK 501

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
                 A  LW++MI    +P++  Y+TLI GLC    + EA+    ++ E    P+ TT
Sbjct: 502 EYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETT 561

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+ +I  + K G+L  A +  N+M+ N   P+VV    ++  LC +    +A  L E   
Sbjct: 562 YNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWV 621

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +    + +T+NT I+ +C  G VD A+   D M+     P+  TYN +L  L    R +
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681

Query: 428 EAFELVTEIEKCG-----------------------------------IQLNIV-TYNTI 451
           EA  ++ ++   G                                    Q N + TY   
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           L+G+C  G + EA  +L +M+ +G  +D+ T+  ++    K+ K
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 203/424 (47%), Gaps = 7/424 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +C  D ++ LL++M+ +GV  +      V+ S  + G  E+AL    +I E GL P V  
Sbjct: 363 RCSSDALR-LLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVIT 421

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++DA       +    +   M   G++ + FT N +L  LCK  R + A +LL    
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
            +G  PD VSY T++++  K    E A  L       +    +S YN LI GLC+  +++
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA   L E+V++G+ P+  TY+ II + C  G++E +     +M      P++ +  +L+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G  L G+  +A  L+   + +G   +V+ Y+TLI  +C  G +D A+     ME     
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  TY+ ++   ++AG    A  + +++  +G      A   +           +    
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGK 721

Query: 363 IEKMAFENCPPNTV-TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            E  + E    N + T+   + GLC  G++  A  +LD+M Q     + +TY  L++GL+
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLI 781

Query: 422 RVNR 425
           +  +
Sbjct: 782 KRQK 785



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 188/371 (50%), Gaps = 4/371 (1%)

Query: 194 RGIDPNVITYSTIISSLCDVGNV--ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           RG+ P++   + ++S+L    +   + SL +   +     +PN ++F  L+  +   G  
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A    + M   G  P+ V Y+TL++  C  G + EA ++  +M+ +   P   TY+ L
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA-FEN 370
           +  FA+ G +  A+++   M + G  P++  Y  +   LCQ     +A  L ++M     
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLST 344

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+ VT+NT +           A++LL++M+     P + T+N ++  L +  +++EA 
Sbjct: 345 ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
             + +I + G+  +++TYNT++   C+AG V +AF L+ +M+ +G K+D  T N ++Y  
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNL 464

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK  +  +A +LL      G + PD +SY +++         + A     +M+   + P+
Sbjct: 465 CKMKRYEDAEELLHSPPQRG-FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523

Query: 551 FATWNVLVRSL 561
            +T+N L++ L
Sbjct: 524 ISTYNTLIKGL 534



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 171/356 (48%), Gaps = 4/356 (1%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRT-HEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
           RG  P++ +  ++L        T  +AS D++  +I     PN   ++ L+H  CS G++
Sbjct: 165 RGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTL 224

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            +A++    M+     P+  TY+ L++   + G L  A  +  RM  +G +P    Y  +
Sbjct: 225 ADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTL 284

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE- 405
           V    +     QA  ++E M      P+  T+N    GLC  G+VD A +L D+M++   
Sbjct: 285 VSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLST 344

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            LP++ TYN L+D   +     +A  L+ E+   G++  +VT+N ++  +C+ G + EA 
Sbjct: 345 ALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEAL 404

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
             L K+  EG   D IT+N +I AYCK G V  A  L+D + G G    D  +  ++L+ 
Sbjct: 405 GKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG-LKMDTFTLNTVLYN 463

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +C     ++A   L      G  P+  ++  ++ + F        + + D ++  K
Sbjct: 464 LCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 5/314 (1%)

Query: 252 HEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSM--DEAVSVSYQMEENSCPPNVTTY 308
           H A+ L + + R  G  P++ A + ++  L  + S     ++ V   + E    PN  T+
Sbjct: 152 HLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTF 211

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + L+      G L  A    + M   G SP+ V Y  ++   C+  M  +A +L+ +M  
Sbjct: 212 NLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKR 271

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P   T+NT +      G +  A K+++ M  Y   P++ TYN L  GL +  +V E
Sbjct: 272 DGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDE 331

Query: 429 AFELVTEIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           AF L  E+E+    L ++VTYNT++    +     +A +LL +M  +G K   +T NI++
Sbjct: 332 AFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVV 391

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
            + CK+GK+  A+  L++I   G   PD+I+Y +L+   C +G + +AF  + +M+ +G+
Sbjct: 392 KSLCKEGKLEEALGKLEKIAEEG-LAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450

Query: 548 CPNFATWNVLVRSL 561
             +  T N ++ +L
Sbjct: 451 KMDTFTLNTVLYNL 464


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 269/555 (48%), Gaps = 42/555 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G    A  +F  +   G +P++  +N +L          + + +   M + G+ P+V 
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +YNIL+K  C       A+K+   M   GC P  V+Y  +V  +C  G++ EAR L    
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314

Query: 162 GS-GVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI---------- 206
              G+ V    +N LI+G  K  ++++A     EM  RG+ P+  T++ I          
Sbjct: 315 AQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYA 374

Query: 207 ----------------------ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                                 +  LC    ++ +  +L     +G    +  F +L+  
Sbjct: 375 AQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAA 434

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA-VSVSYQMEENSCPP 303
           Y   G   EAS+L+  M + G  P+   ++ LI GLC+ G +DEA + + + + +  C  
Sbjct: 435 YSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS 494

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
             T+++  +D + + GN +GA + W+ M + G   + +A++  +  LC+ +  ++A+   
Sbjct: 495 --TSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAF 552

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M      PN +T+N+ I  LC  G +  A+KL+  M+Q   +P+I T N L+DGL R 
Sbjct: 553 AEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCRE 612

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            ++K    L+ ++   G+  + VTYNTI++  CRA  +  A   + KML+ G + D  T+
Sbjct: 613 GKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTY 672

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           NI +++ C+   +N A +LLD +    + +P+ ++Y +L+ GIC S  +  A I   +++
Sbjct: 673 NIWMHSLCRNHMLNQAGKLLDELV-AVDCSPNSVTYNTLMDGIC-SDVLDRAMILTGRLI 730

Query: 544 NEGICPNFATWNVLV 558
                PN  T NV +
Sbjct: 731 KMAFKPNTITLNVFL 745



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/529 (26%), Positives = 242/529 (45%), Gaps = 41/529 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G++     +  +I  +   G +  A KMF  +   G +PTV  YN ++D L 
Sbjct: 240 LLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLC 299

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E R      ++  M + G++ N  T+N+L+    K+ ++D A     EM  +G  PD+ 
Sbjct: 300 HEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSC 359

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDR 194
           ++  I +   K G   +       F S +S    + L+  LC +H++++A+ LL   +++
Sbjct: 360 TFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQ 419

Query: 195 GID-----------------------------------PNVITYSTIISSLCDVGNVETS 219
           G+                                    P+  T++ +I  LC+ G ++ +
Sbjct: 420 GVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEA 479

Query: 220 LGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
             +L  M  +G C     SFT  L  Y   G    A   W+ M   G   + +A+S  I+
Sbjct: 480 QLLLEHMVSKGYCLST--SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYIN 537

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GLC    ++EA     +M      PN  TY+++I    KAGN+  A ++   M  +G  P
Sbjct: 538 GLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVP 597

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           ++     ++  LC+        +L+  M      P+TVT+NT I   C    ++ AM  +
Sbjct: 598 DIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFM 657

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           ++M    C P+I TYN  +  L R + + +A +L+ E+       N VTYNT++ G+C +
Sbjct: 658 NKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC-S 716

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
            ++  A  L G+++    K + IT N+ +  +CKQG  N A+   +++R
Sbjct: 717 DVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMWAEKLR 765



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 214/506 (42%), Gaps = 106/506 (20%)

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           +  ++  A+ +  EM   G  P++ T++ ++   C  G V  + G+LG M   G  P++ 
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+  L+KG+ + G + +A  ++  M R G  P VV Y+ L+  LC  G M EA  +  +M
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-----CSPNVVAYTC------ 345
            +     N  T++ LIDG+AK+G +  AS  +  M + G     C+ N++A         
Sbjct: 315 AQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYA 374

Query: 346 ---------------------MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK- 383
                                +V  LC ++    A  L+     +  P     FN  I  
Sbjct: 375 AQLVHDHDMFSSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAA 434

Query: 384 ----------------------------------GLCGCGRVDWAMKLLDQM-------- 401
                                             GLC  GR+D A  LL+ M        
Sbjct: 435 YSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS 494

Query: 402 --------------------KQYECLPNI------TTYNELLDGLLRVNRVKEAFELVTE 435
                               K ++ + NI        ++  ++GL R++ V EA++   E
Sbjct: 495 TSFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAE 554

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   GI  N +TYN+I+  +C+AG + EA +L+  M   G   D  T NI+I   C++GK
Sbjct: 555 MTSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGK 614

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           +     LL  +   G   PD ++Y +++   C +  M  A  ++ KML  G  P+  T+N
Sbjct: 615 LKMVDNLLLDMCSNG-LTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYN 673

Query: 556 VLVRSLFSN--LGHLGPVYILDDIMA 579
           + + SL  N  L   G   +LD+++A
Sbjct: 674 IWMHSLCRNHMLNQAGK--LLDELVA 697



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 175/365 (47%), Gaps = 5/365 (1%)

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G    +L +L ++   G  P++ + ++LL+     G    A +++  M  EG  P++  
Sbjct: 161 AGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGPRPSLAT 220

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           ++ ++ G C  G +  A  +   M ++   P+V +Y+ LI G    G    A +++  M 
Sbjct: 221 FNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMH 280

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +GC P VV Y  +V VLC      +A  L ++MA      NT+TFN  I G    G++D
Sbjct: 281 RSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMD 340

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A     +M+    +P+  T+N +     R ++   A +LV + +     ++    + ++
Sbjct: 341 QASAAYREMQARGLVPDSCTFNII---AARAHKFGYAAQLVHDHDMFSSHMSADGLDMLV 397

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C    + +A++LL   + +G  L    FN +I AY K+G    A +L  RI      
Sbjct: 398 CRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELY-RIMNKLGL 456

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P   ++  L+ G+CN G + EA + L+ M+++G C +  ++ + + + F +   +G + 
Sbjct: 457 APSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS-TSFTICLDAYFRDGNAVGALK 515

Query: 573 ILDDI 577
             DD+
Sbjct: 516 CWDDM 520



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 179/411 (43%), Gaps = 34/411 (8%)

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  +L  +   G  P++   S ++  L   G V  +  +  +M   G  P++ +F ++L
Sbjct: 166 EALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGPRPSLATFNAML 225

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G+   G    AS L   M + G  P+V +Y+ LI G C  G   +A  +   M  + C 
Sbjct: 226 LGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEGMHRSGCE 285

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P V TY+ L+D     G +  A ++++ M   G   N + +  ++    ++    QA + 
Sbjct: 286 PTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQMDQASAA 345

Query: 363 IEKMAFENCPPNTVTFN--------------------------------TFIKGLCGCGR 390
             +M      P++ TFN                                  +  LC   R
Sbjct: 346 YREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVCRLCWDHR 405

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A +LL    +      +T +N L+    +    +EA EL   + K G+  +  T+N 
Sbjct: 406 LDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNY 465

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G+C  G + EA  LL  M+ +G  L + +F I + AY + G    A++  D + G  
Sbjct: 466 LIMGLCNQGRLDEAQLLLEHMVSKGYCL-STSFTICLDAYFRDGNAVGALKCWDDM-GNI 523

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               D I++++ + G+C    + EA+    +M + GI PN  T+N ++ +L
Sbjct: 524 GLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISAL 574



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 162/364 (44%), Gaps = 73/364 (20%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            +D    LL     +GV      F ++I +Y + GL E+A +++  + + GL P+   +N
Sbjct: 405 RLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAPSSSTFN 464

Query: 70  HILDALLAENRFS--------MINPIY--------------------------SNMKRDG 95
           +++  L  + R          M++  Y                           +M   G
Sbjct: 465 YLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWDDMGNIG 524

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++ +   ++  +  LC+ + V+ AY+   EM ++G  P+ ++Y +I+S++CK G + EA 
Sbjct: 525 LQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAGNMTEAL 584

Query: 156 ELA--MR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +L   MR       +   N LI+GLC+E K++    LL +M   G+ P+ +TY+TII++ 
Sbjct: 585 KLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAY 644

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFT----SLLKGYLL--GGRT------------- 251
           C   ++ +++  + +M V GC P+I ++     SL + ++L   G+              
Sbjct: 645 CRAQDMNSAMNFMNKMLVAGCEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNS 704

Query: 252 ---------------HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
                            A  L  R+I+  F PN +  +  +   C  G  + A+  + ++
Sbjct: 705 VTYNTLMDGICSDVLDRAMILTGRLIKMAFKPNTITLNVFLSHFCKQGFGNRALMWAEKL 764

Query: 297 EENS 300
            E+S
Sbjct: 765 REDS 768



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 143/336 (42%), Gaps = 32/336 (9%)

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +H   + G   EA+ V  ++  +   P+++  SAL+    ++G +  A  ++  M + G 
Sbjct: 155 LHAFLAAGMAAEALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGP 214

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++  +  M+   C   M   A  L+  M      P+  ++N  IKG C  G    A K
Sbjct: 215 RPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFK 274

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + + M +  C P + TYN L+D L    R+ EA  L  E+ + GIQ+N +T+N ++ G  
Sbjct: 275 MFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYA 334

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE----- 511
           ++G + +A     +M   G   D+ TFNII     K G     +   D            
Sbjct: 335 KSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLD 394

Query: 512 -------WNPDIISYTSLLWGICNSG------------------GMQEAFIYLQKMLNE- 545
                  W+  +     LL G    G                  G+ E    L +++N+ 
Sbjct: 395 MLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKL 454

Query: 546 GICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           G+ P+ +T+N L+  L  N G L    +L + M +K
Sbjct: 455 GLAPSSSTFNYLIMGL-CNQGRLDEAQLLLEHMVSK 489



 Score = 43.5 bits (101), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 1/149 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L  + ++  V  LL  M   G++     + ++IN+Y R      A+    ++   G
Sbjct: 605 LIDGLCREGKLKMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAG 664

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P +  YN  + +L   +  +    +   +      PN  TYN L+  +C ++ +D A 
Sbjct: 665 CEPDIFTYNIWMHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGIC-SDVLDRAM 723

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            L   +      P+ ++    +S  CK G
Sbjct: 724 ILTGRLIKMAFKPNTITLNVFLSHFCKQG 752


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 210/412 (50%), Gaps = 6/412 (1%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           +P+VF YN ++   CK NR++ A  +L  M  KG +PD V++  ++ + C  G+++ A +
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 157 LAMRF------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +             +  Y  LI     E  I+EA  LL EM+ RG++P+  TY+ I   L
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G V+ +   +  +  RGC P++ ++  LL+  L  G+  E     + +   G  PNV
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V YS LI  LC +G ++E+V++   M+E    P+   Y  LI  F + G L  A +  + 
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           MI +G  P++V Y  ++  LC+N     A  +  K+    CPPN  ++NT +  L   G 
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
              A+ ++ QM      P++ TYN L+  L R   V EA  L+ ++     Q NIV+Y T
Sbjct: 341 RYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKT 400

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +L G+C+A  + +A ++L  M+  G + +  T+ ++I      G    A++L
Sbjct: 401 VLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 221/441 (50%), Gaps = 6/441 (1%)

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARE----LAMRFGSGVSVYNALINGLCKEHKI 181
           M  K   PD +  T ++        +++A      L       V  YNA+I+G CK ++I
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV-RGCNPNIHSFTS 240
           E A  +L  M  +G  P+V+T++ +I + C  G ++ +L +  ++     C P + ++T 
Sbjct: 61  ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L++ Y+L G   EA  L + M+  G  P+   Y+ +  GLC  G +D A      +    
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C P+V TY+ L+      G      +  + + S GC PNVV Y+ ++  LC++    ++ 
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +L++ M  +   P+   ++  I   C  G++D A++ LD M     LP+I  YN ++  L
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAAL 300

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +      A E+  ++++ G   N+ +YNT+L  +  +G    A  ++ +ML +G   D 
Sbjct: 301 CKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDV 360

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           IT+N +I   C+ G V+ AI LL  +   G + P+I+SY ++L G+C +  + +A   L 
Sbjct: 361 ITYNSLISCLCRDGMVDEAIGLLADML-SGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419

Query: 541 KMLNEGICPNFATWNVLVRSL 561
            M+  G  PN  T+ +L+  +
Sbjct: 420 AMIENGCQPNETTYTLLIEGI 440



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 208/417 (49%), Gaps = 43/417 (10%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP V  YN ++      NR      +   MKR G  P+V T+NI++   C   ++D A K
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 122 LLVEM-GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +  E+  +  C P  ++YT ++ +    G ++EA +L     S         YN +  GL
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 176 CKEHKIEEAF------------------------------------WLLCEMVDRGIDPN 199
           CKE K++ AF                                    W + E+  RG +PN
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKW-MSEIFSRGCEPN 219

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V+TYS +ISSLC  G +E S+ ++  M  +G  P+ + +  L+  +   G+   A +  +
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MI +GFLP++V Y+T++  LC NG+ D AV +  +++E  CPPNV++Y+ ++     +G
Sbjct: 280 CMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSG 339

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +   A  + ++M+S G  P+V+ Y  ++  LC++ M  +A  L+  M      PN V++ 
Sbjct: 340 DRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYK 399

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T + GLC   R+D A+++L  M +  C PN TTY  L++G+       +A EL   +
Sbjct: 400 TVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 179/340 (52%), Gaps = 5/340 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I +Y   G  ++ALK+   +   GL+P    YN I   L  E +          +   G
Sbjct: 121 LIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRG 180

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +P+V TYNILL+AL    + D   K + E+ ++GC P+ V+Y+ ++SS+C+ G++EE+ 
Sbjct: 181 CKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESV 240

Query: 156 ELA--MR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L   M+          Y+ LI   C+E K++ A   L  M+  G  P+++ Y+TI+++L
Sbjct: 241 NLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAAL 300

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  GN + ++ I G++   GC PN+ S+ ++L      G  + A  + ++M+ +G  P+V
Sbjct: 301 CKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDV 360

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           + Y++LI  LC +G +DEA+ +   M      PN+ +Y  ++ G  KA  +  A ++   
Sbjct: 361 ITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAA 420

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           MI NGC PN   YT +++ +  +    QA  L   +   N
Sbjct: 421 MIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMN 460



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 181/340 (53%), Gaps = 3/340 (0%)

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  +   P++   T L+KG+       +A+ +   + + G  P+V AY+ +I G C    
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYT 344
           ++ A +V  +M+     P+V T++ +I  F   G +  A +++  ++  N C P ++ YT
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            +++         +A  L+++M      P+T T+N   +GLC  G+VD A + +  +   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
            C P++ TYN LL  LL   +  E  + ++EI   G + N+VTY+ ++  +CR G + E+
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             L+  M  +G   DA  ++ +I A+C++GK++ AI+ LD +   G + PDI++Y +++ 
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG-FLPDIVNYNTIMA 298

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +C +G    A     K+   G  PN +++N ++ +L+S+
Sbjct: 299 ALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSS 338



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 170/326 (52%), Gaps = 5/326 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    LL +M   G+      +  +     + G  ++A +    +   G KP V  YN 
Sbjct: 131 IDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L ALL + ++       S +   G EPNV TY+IL+ +LC++ +++ +  L+  M  KG
Sbjct: 191 LLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             PDA  Y  ++++ C+ G+++ A E     +   F   +  YN ++  LCK    + A 
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAV 310

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +  ++ + G  PNV +Y+T++S+L   G+   +LG++ QM  +G +P++ ++ SL+   
Sbjct: 311 EIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCL 370

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   EA  L   M+   F PN+V+Y T++ GLC    +D+A+ V   M EN C PN 
Sbjct: 371 CRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNE 430

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRM 331
           TTY+ LI+G   +G+   A ++ N +
Sbjct: 431 TTYTLLIEGIGFSGSRTQAMELANSL 456



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 116/233 (49%), Gaps = 5/233 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    +I+    L++ MK +G++     +  +I ++ R G  + A++    +   G
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN I+ AL           I+  +   G  PNV +YN +L AL  +     A 
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRAL 345

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE-----ARELAMRFGSGVSVYNALINGL 175
            ++ +M +KG  PD ++Y +++S +C+ G V+E     A  L+ RF   +  Y  ++ GL
Sbjct: 346 GMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGL 405

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           CK H+I++A  +L  M++ G  PN  TY+ +I  +   G+   ++ +   +++
Sbjct: 406 CKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYI 458


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 247/516 (47%), Gaps = 6/516 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           +A  +F+ +R  G+ P+      +LD L+   +F +   ++ N+      P+ F Y   +
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFG 162
           +A  K + V    +L   M +    P    Y  ++  +CK  ++ +A +L     A R  
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +  YN LI+G CK    E++F +   M    I+P++IT++T++  L   G VE +  +
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M   G  P+  +F+ L  GY    +   A  ++   +  G   N    S L++ LC 
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +++A  +  +       PN   Y+ +IDG+ + G+L+GA      M   G  P+ +A
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y C+++  C+      A   + KM  +   P+  T+N  I G       D    +L +M+
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
               +PN+ +Y  L++ L + +++ EA  +  ++E  G+   +  YN ++ G C  G + 
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +AF+   +ML +G +L+ +T+N +I      GK++ A  LL  I   G   PD+ +Y SL
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG-LKPDVFTYNSL 605

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + G   +G +Q      ++M   GI P   T+++L+
Sbjct: 606 ISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 247/516 (47%), Gaps = 10/516 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           + L++F R++   + P+V IYN ++D L    R +    ++  M    + P++ TYN L+
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFG 162
              CK    + ++K+   M      P  +++ T++  + K G VE+A  +      + F 
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                ++ L +G     K E A  +    VD G+  N  T S ++++LC  G +E +  I
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           LG+   +G  PN   + +++ GY   G    A      M ++G  P+ +AY+ LI   C 
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G M+ A     +M+     P+V TY+ LI G+ +         I   M  NG  PNVV+
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++  LC+ +   +A  +   M      P    +N  I G C  G+++ A +   +M 
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +     N+ TYN L+DGL    ++ EA +L+ EI + G++ ++ TYN+++ G   AG V 
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
               L  +M   G K    T++++I    K+G     I+L +R+ G     PD++ Y  +
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-----IELTERLFGEMSLKPDLLVYNGV 671

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           L      G M++AF   ++M+ + I  +  T+N L+
Sbjct: 672 LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 230/503 (45%), Gaps = 9/503 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++  + +L++MK  G       F  + + Y     AE AL ++    + G+K      + 
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+AL  E +      I       G+ PN   YN ++   C+   + GA   +  M  +G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
             PD ++Y  ++   C+LG++E A +   +         V  YN LI G  ++++ ++ F
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L EM D G  PNV++Y T+I+ LC    +  +  +   M  RG +P +  +  L+ G 
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+  +A      M+++G   N+V Y+TLI GL   G + EA  +  ++      P+V
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY++LI G+  AGN+     ++  M  +G  P +  Y  ++  LC          L  +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGE 658

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M+ +   P+ + +N  +      G ++ A  L  QM +     + TTYN L+ G L+V +
Sbjct: 659 MSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + E   L+ E+    ++    TYN I+ G C     + A+    +M  +G  LD    N 
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775

Query: 486 IIYAYCKQGKVNNAIQLLDRIRG 508
           ++    ++ +   A  ++  + G
Sbjct: 776 LVSGLKEEWRSKEAEIVISEMNG 798



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 214/442 (48%), Gaps = 11/442 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L ++ +I+  + +L +   +G+  +E ++ ++I+ Y R G    A      + + G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP    YN ++                + MK  G+ P+V TYNIL+    +    D  +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            +L EM + G  P+ VSY T+++ +CK  ++ EA    R++  R     V +YN LI+G 
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C + KIE+AF    EM+ +GI+ N++TY+T+I  L   G +  +  +L ++  +G  P++
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ SL+ GY   G       L+  M R G  P +  Y  LI  LC+     E + ++ +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTK----EGIELTER 654

Query: 296 M-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +  E S  P++  Y+ ++  +A  G++  A  +  +MI      +   Y  ++    +  
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +  SLI++M      P   T+N  +KG C       A     +M++   L ++   N
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGN 774

Query: 415 ELLDGLLRVNRVKEAFELVTEI 436
           EL+ GL    R KEA  +++E+
Sbjct: 775 ELVSGLKEEWRSKEAEIVISEM 796


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 267/580 (46%), Gaps = 46/580 (7%)

Query: 26  VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           V  S  VF  +I  +    + E A  +F R ++ G++  +   N +L  L+ +NR   + 
Sbjct: 132 VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVR 191

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCK----NNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
            ++  + + G  PN+ TY I++   C+    +  +  A ++L ++   G  P+ V+Y T 
Sbjct: 192 LLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTY 251

Query: 142 VSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +  +CK+G    A  L               +NA+I GLC+   ++EA  +  EM + GI
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+V +YS +I   C  G V+ +  +  +M   G  PNI+S++ L+ G+   GR  +A +
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           ++  M   G LP+V +YS LI G C  G MD A+    +M  N+  P+   Y +LI G+ 
Sbjct: 372 VFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYY 431

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K+     A + +  M   G  P+ +A   ++ + C+   F++A +L EK        N  
Sbjct: 432 KSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY 491

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           ++N FI  +C     + A++LL  M +   LP++  Y+ L+    +    ++A  L  ++
Sbjct: 492 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551

Query: 437 EKCGIQLNIVTYNTILH-----------------------------------GVCRAGMV 461
            K GI  N+ TY  +++                                   G C  G +
Sbjct: 552 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEM 611

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
             A  L  +M  EG   + +T+   I  Y K  K N A +L ++++  G + PD I YT 
Sbjct: 612 TRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVY-PDQILYTM 670

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRS 560
           L+   CN+G M  A     +M  EG C PN   +  L+ S
Sbjct: 671 LIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINS 710



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 248/533 (46%), Gaps = 11/533 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY-RRVGLA---EQALKMFYRI 56
           +++ L E   +DGV+ L + +   G   +   +  ++N + R VG +    +A ++  +I
Sbjct: 177 LLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKI 236

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
              G  P V  Y   +  L     F +   +  N+ R     N   +N ++  LC+   +
Sbjct: 237 YMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGIL 296

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV----SVYNA 170
           D A ++  EM N G  PD  SY+ ++   C+ G+V++A E+   MR  SG+      Y+ 
Sbjct: 297 DEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR-NSGILPNIYSYSI 355

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI+G CKE ++++A  +  EM + GI P+V +YS +I   C  G++++++    +M    
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            +P+  ++ SL+KGY    +   A   +  M + G  P+ +A + ++   C     ++A+
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           ++S + +EN    N  +Y+  I    +      A Q+   M+     P+VV Y+ ++   
Sbjct: 476 ALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCF 535

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +     +A  L  KM       N  T+   I       ++D A +L   MK+    P+ 
Sbjct: 536 AKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ 595

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
             Y  L+ G      +  A  L  E+ + G   N+VTY   ++   +     +A +L  K
Sbjct: 596 IAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEK 655

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           M   G   D I + ++I A+C  G++N A  L D ++  G   P+++ YT L+
Sbjct: 656 MKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLI 708



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/535 (24%), Positives = 241/535 (45%), Gaps = 8/535 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+Q +  +    +   F +VI    + G+ ++A ++F  ++  G+ P V  Y+ ++D   
Sbjct: 267 LIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFC 326

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + R    + ++  M+  G+ PN+++Y+IL+   CK  RVD A ++  EM N G  PD  
Sbjct: 327 RKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVY 386

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY+ ++   C+ G ++ A +      +  F      Y +LI G  K  +   A      M
Sbjct: 387 SYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G+ P+ I  + I+S  C   +   +L +  +    G + N +S+   +     G   
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L   M++   LP+VV YSTLI       + ++AV +  +M +     NV TY+ L
Sbjct: 507 EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTIL 566

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+ F     +  A +++  M  +   P+ +AYT +V   C      +A +L ++M+ E C
Sbjct: 567 INLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGC 626

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+  FI       + + A KL ++MK+    P+   Y  L+        +  A  
Sbjct: 627 SPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEA 686

Query: 432 LVTEIEKCG-IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           L  E+++ G    N+V Y  +++   +     +A +L  +M  +G      +   +  ++
Sbjct: 687 LFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESW 746

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           C + +V    +L  R + G +W    + YT LL   C     Q    Y +  + E
Sbjct: 747 CCRHQVLKTGKLGGRAKQGLDWRFQ-VKYT-LLPDSCGCAHAQIHDFYTRPFMQE 799



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 184/432 (42%), Gaps = 76/432 (17%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    + ++MK  G+      +  +I+ + R G  +QA ++F  +R  G+ P +  Y+ 
Sbjct: 296 LDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSI 355

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D    E R      ++  MK  G+ P+V++Y+IL+   C+   +D A K   EM +  
Sbjct: 356 LIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNN 415

Query: 131 CAPDAVSYTT-----------------------------------IVSSICKLGQVEEAR 155
            +P A +Y +                                   I+S  C+     +A 
Sbjct: 416 FSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475

Query: 156 ELAMRFG-SGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L+ +F  +GV      YN  I+ +C+    E+A  LL  M+ R + P+V+ YST+IS  
Sbjct: 476 ALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCF 535

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
               N E ++ +  +M   G   N+ ++T L+  ++   +   A  L+  M      P+ 
Sbjct: 536 AKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQ 595

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA-------------------- 310
           +AY++L+ G C+ G M  A ++  +M    C PNV TY+                     
Sbjct: 596 IAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEK 655

Query: 311 ---------------LIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNN 354
                          LI  F   G +  A  +++ M   G C+PNVV YTC++    + N
Sbjct: 656 MKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLN 715

Query: 355 MFHQAHSLIEKM 366
              QA  L E+M
Sbjct: 716 KRDQAEKLYEEM 727


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/551 (25%), Positives = 278/551 (50%), Gaps = 13/551 (2%)

Query: 17  LLQQMKVEG-VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL++M+ +G V  S+  + SVI +  + G  E+A+K+   +  FG+  +V     ++   
Sbjct: 296 LLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGF 355

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              N        ++ M+ +G+ P+   ++++++  CKN  ++ A ++   M + G AP +
Sbjct: 356 CNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSS 415

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSVY-------NALINGLCKEHKIEEAFWLL 188
           V    ++    K    E A E+   F      +       N +   LCK+ K++ A   L
Sbjct: 416 VLVHKMIQGCLKAESPEAALEI---FNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFL 472

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M ++GI+PNV+ Y+ ++ + C + N++ +  I  +M  +G  PN  +++ L+ G+   
Sbjct: 473 RMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKN 532

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTT 307
                A ++ N+MI   F  N V Y+T+I+GLC  G   +A  +   + +E       T+
Sbjct: 533 QDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTS 592

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+++IDGF K G+   A + +  M  NG SPNVV +T ++   C++N    A  +I +M 
Sbjct: 593 YNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMK 652

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            ++   +   +   I G C    +  A  L  ++ +   +PN++ YN L+ G   + ++ 
Sbjct: 653 SKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMD 712

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A +L  ++   GI  ++ TY T++ G+ + G ++ A  L  ++L  G   D I + +++
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLV 772

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
               K+G+   A ++L+ ++   +  P+++ Y++++ G    G + EAF    +ML +G+
Sbjct: 773 NGLSKKGQFVRASKMLEEMKKK-DATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGL 831

Query: 548 CPNFATWNVLV 558
             +   +N+LV
Sbjct: 832 VHDDTIFNLLV 842



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/592 (24%), Positives = 261/592 (44%), Gaps = 42/592 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L+   K      S   F  ++N+Y R    + A+  F  + +  + P V   N++L 
Sbjct: 153 VNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLS 212

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           +L+  N       IY+ M   G+  +  T  +L++A  +  + + A K+   + ++G  P
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEP 272

Query: 134 DAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV----SVYNALINGLCKEHKIEEAFWL 187
           D + ++  V + CK+  +  A +L   MR   GV      Y ++I    KE  +EEA  +
Sbjct: 273 DGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKV 332

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EMV  GI  +VI  +++I+  C+   +  +L    +M   G  P+   F+ +++ +  
Sbjct: 333 KDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCK 392

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHG---------------------------- 279
                +A +++ RM   G  P+ V    +I G                            
Sbjct: 393 NMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMC 452

Query: 280 ------LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
                 LC  G +D A S    ME     PNV  Y+ ++    +  N+  A  I++ M+ 
Sbjct: 453 NKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  PN   Y+ ++    +N     A  +I +M   N   N V +NT I GLC  G+   
Sbjct: 513 KGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSK 572

Query: 394 AMKLLDQM-KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           A ++L  + K+       T+YN ++DG  +      A E   E+ + GI  N+VT+ +++
Sbjct: 573 AKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLI 632

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G C++  +  A +++ +M  +  KLD   +  +I  +CK+  +  A  L   +   G  
Sbjct: 633 NGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELG-L 691

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            P++  Y +L+ G  N G M  A    +KM+N+GI  +  T+  ++  L  +
Sbjct: 692 MPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 207/394 (52%), Gaps = 8/394 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G  + A      +   G++P V  YN+++ A        +   I+S M   G++PN F
Sbjct: 461 KQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNF 520

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
           TY+IL+    KN     A++++ +M       + V Y TI++ +CK+GQ  +A+E+    
Sbjct: 521 TYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
               R+  G + YN++I+G  KE   + A     EM + GI PNV+T++++I+  C    
Sbjct: 581 IKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNR 640

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ +L ++ +M  +    ++ ++ +L+ G+        A  L++ ++  G +PNV  Y+ 
Sbjct: 641 MDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNN 700

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI G  + G MD A+ +  +M  +    ++ TY+ +IDG  K GNL+ AS +++ +++ G
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALG 760

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+ + Y  +V  L +   F +A  ++E+M  ++  PN + ++T I G    G ++ A 
Sbjct: 761 IVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAF 820

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           ++ D+M +   + + T +N L+ G  RV +   A
Sbjct: 821 RVHDEMLEKGLVHDDTIFNLLVSG--RVEKPPAA 852



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 219/460 (47%), Gaps = 7/460 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIE   +  E++    + ++MK  G++ S  +   +I    +    E AL++F    E  
Sbjct: 386 MIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETW 445

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +     + N I   L  + +          M+  G+EPNV  YN ++ A C+   +D A 
Sbjct: 446 IAHGF-MCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLAR 504

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
            +  EM  KG  P+  +Y+ ++    K    + A E     +A  F +   +YN +INGL
Sbjct: 505 SIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGL 564

Query: 176 CKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           CK  +  +A  +L  ++ ++       +Y++II      G+ ++++    +M   G +PN
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPN 624

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +FTSL+ G+    R   A ++ + M  +    +V AY  LI G C    M  A ++  
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFS 684

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ++ E    PNV+ Y+ LI GF   G +  A  ++ +M+++G S ++  YT M+  L ++ 
Sbjct: 685 ELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
               A  L  ++      P+ + +   + GL   G+   A K+L++MK+ +  PN+  Y+
Sbjct: 745 NLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYS 804

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            ++ G  R   + EAF +  E+ + G+  +   +N ++ G
Sbjct: 805 TVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 228/484 (47%), Gaps = 9/484 (1%)

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
           +M+N +  + KR   E +   +N LL A  +N R+D A      M ++   P       +
Sbjct: 151 AMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNV 210

Query: 142 VSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +SS+ +   ++EA+E+  +       G  V+    L+    +E K EEA  +   ++ RG
Sbjct: 211 LSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTT-QLLMRASLRERKPEEAMKIFRRVMSRG 269

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP-NIHSFTSLLKGYLLGGRTHEA 254
            +P+ + +S  + + C + ++  +L +L +M  +G  P +  ++TS++   +  G   EA
Sbjct: 270 AEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEA 329

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             + + M+  G   +V+A ++LI G C+   + +A+    +MEE    P+   +S +I+ 
Sbjct: 330 VKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEW 389

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           F K   +  A +I+ RM S G +P+ V    M++  C      +A   I   +FE    +
Sbjct: 390 FCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQG-CLKAESPEAALEIFNDSFETWIAH 448

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
               N     LC  G+VD A   L  M+     PN+  YN ++    R+  +  A  + +
Sbjct: 449 GFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ + G+Q N  TY+ ++ G  +      A++++ +M+    + + + +N II   CK G
Sbjct: 509 EMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVG 568

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           + + A ++L  +     ++    SY S++ G    G    A    ++M   GI PN  T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTF 628

Query: 555 NVLV 558
             L+
Sbjct: 629 TSLI 632


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 216/410 (52%), Gaps = 4/410 (0%)

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
            F    ++YN LI GLCK  K   A  LL  M   G D +V+TY+T+I  LC  G+++ +
Sbjct: 5   HFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAA 64

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +L +M   GC PN+ ++T+L+ G     R H+A     RM+R G  P++V Y++LIHG
Sbjct: 65  QALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHG 124

Query: 280 LCSNGSMDEAVSVSYQ-MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           LC    MD+A  V  + M E+   P+V TY+  I G  KAG L    ++   M   G SP
Sbjct: 125 LCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISP 184

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +VV +  ++  LC+ N    A  + + M    C P+++T++  +  L    R+D   ++L
Sbjct: 185 DVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVL 244

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           + M +        TY  L+  L+R   ++ A     +  + G  + + T+N  +  +CR+
Sbjct: 245 EHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRS 304

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G    A  +L  M+  G+  + +++N +I   CK G V++A +L  ++   G   PD+I 
Sbjct: 305 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 364

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLV--RSLFSNL 565
           + +L+ G C +G + +A   L++M  + IC P+  T+N ++  +S F +L
Sbjct: 365 FNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSL 414



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 217/416 (52%), Gaps = 7/416 (1%)

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           DA  Y T+++ +CK  +   A EL     A  + + V  Y  LI+GLCK   ++ A  LL
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M D G  PNV+TY+ +I  LC       ++  + +M   GC P++ ++ SL+ G  + 
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 249 GRTHEAS-DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            R  +A   L   MI  G +P+VV Y+T I GLC  G +D+ + +  +M+     P+V T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           + ++I G  KA  +  A Q++  M+  GC P+ + Y+ M+  L + N       ++E M 
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                  + T+   I  L   G ++ A    +Q  +  C+  + T+N  +  L R  +  
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT-KLDAITFNII 486
            A  ++  + + G   N+++YN ++ G+C++G V +A++L  KML  G  K D I FN +
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 368

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           I  +CK G+++ A QLL  ++      PD+++Y +++ G    G +++A + L++M
Sbjct: 369 ISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 194/402 (48%), Gaps = 8/402 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
             AL++ + +   G   +V  Y  ++D L           +   M   G  PNV TY  L
Sbjct: 27  RHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTAL 86

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFG 162
           +  LCK  R   A + +  M   GC PD V+Y +++  +C   ++++A    +EL +  G
Sbjct: 87  IDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESG 146

Query: 163 --SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
               V  YN  I+GLCK  K+++   +L EM   GI P+V+T+ +IIS LC    ++ + 
Sbjct: 147 RIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAF 206

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +   M  RGC P+  +++ +L       R     ++   M++ G       Y+ LIH L
Sbjct: 207 QVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHAL 266

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
              G ++ A     Q  E  C   V T++A I    ++G    A  I   MI +G  PN+
Sbjct: 267 IRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNL 326

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           ++Y  ++  LC++     A  L  KM     C P+ + FNT I G C  GR+  A +LL 
Sbjct: 327 LSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLK 386

Query: 400 QMKQYE-CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
           +MK    C+P++ TYN ++DG  +   +K+A  L+ E++  G
Sbjct: 387 EMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 208/416 (50%), Gaps = 8/416 (1%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           YN L+  LCK  +   A +LL  M   G     V+YTT++  +CK G ++ A+ L  +  
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 163 SG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                  V  Y ALI+GLCK  +  +A   +  M+  G +P+++TY+++I  LC    ++
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 218 TSLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            +  +L ++ +  G  P++ ++ + + G    G+  +  ++   M R G  P+VV + ++
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLC    +D+A  V   M E  C P+  TYS ++D  ++A  L    ++   M+ +G 
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGH 252

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
                 Y  ++  L +      A    E+     C     T N FI  LC  G+   A  
Sbjct: 253 YALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKN 312

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG-IQLNIVTYNTILHGV 455
           +L  M +   LPN+ +YN ++DGL +   V +A++L  ++   G  + +++ +NT++ G 
Sbjct: 313 ILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGF 372

Query: 456 CRAGMVVEAFQLLGKMLIEGTKL-DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           C+AG + +A QLL +M  +   + D +T+N +I    K G +  A  LL+ ++  G
Sbjct: 373 CKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 198/394 (50%), Gaps = 8/394 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M   G   S   + ++I+   + G  + A  +  ++ + G  P V  Y  ++D L 
Sbjct: 32  LLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLC 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDA 135
              R          M R G EP++ TYN L+  LC  NR+D A  +L E M   G  PD 
Sbjct: 92  KARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDV 151

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCE 190
           V+Y T +S +CK G++++  E+      G     V  + ++I+GLCK ++I++AF +   
Sbjct: 152 VTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKG 211

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M++RG  P+ +TYS ++ +L     ++T   +L  M   G      ++  L+   +  G 
Sbjct: 212 MLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGD 271

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              AS  + + +  G +  V  ++  I  LC +G    A ++   M E+   PN+ +Y+ 
Sbjct: 272 IESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNF 331

Query: 311 LIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +IDG  K+GN+  A ++  +M+ +G C P+V+ +  ++   C+     QA  L+++M  +
Sbjct: 332 VIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAK 391

Query: 370 N-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           N C P+ VT+NT I G    G +  A  LL++M+
Sbjct: 392 NICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 186/380 (48%), Gaps = 4/380 (1%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M  R    +   Y+T+I+ LC       +L +L  M   G + ++ ++T+L+ G    G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A  L  +M   G  PNVV Y+ LI GLC      +A+    +M  + C P++ TY++
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 311 LIDGFAKAGNLLGASQIWNR-MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           LI G   A  +  A  +    MI +G  P+VV Y   +  LC+     +   ++E+M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VTF + I GLC   R+D A ++   M +  C+P+  TY+ +LD L R NR+   
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            E++  + K G      TY  ++H + RAG +  A     + +  G  ++  T N  I A
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGA 300

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC- 548
            C+ GK   A  +L  +   G   P+++SY  ++ G+C SG + +A+   +KML+ G C 
Sbjct: 301 LCRSGKFPLAKNILLGMIESGSL-PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 359

Query: 549 PNFATWNVLVRSLFSNLGHL 568
           P+   +N L+ S F   G L
Sbjct: 360 PDVIFFNTLI-SGFCKAGRL 378



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 188/374 (50%), Gaps = 8/374 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  ++D  Q LLQ+M   G + +   + ++I+   +      A++   R+   G
Sbjct: 51  LIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG 110

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSN-MKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            +P +  YN ++  L   NR      +    M   G  P+V TYN  +  LCK  ++D  
Sbjct: 111 CEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKG 170

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALING 174
            ++L EM   G +PD V++ +I+S +CK  ++++A ++    +  G       Y+ +++ 
Sbjct: 171 LEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDN 230

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L + ++++    +L  MV  G      TY+ +I +L   G++E++     Q    GC   
Sbjct: 231 LSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVME 290

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +++  + +      G+   A ++   MI  G LPN+++Y+ +I GLC +G++D+A  +S 
Sbjct: 291 VYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSR 350

Query: 295 QM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM-ISNGCSPNVVAYTCMVKVLCQ 352
           +M +   C P+V  ++ LI GF KAG L  A Q+   M   N C P+VV Y  M+    +
Sbjct: 351 KMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSK 410

Query: 353 NNMFHQAHSLIEKM 366
                QA  L+E+M
Sbjct: 411 FGSLKQAKLLLEEM 424


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 256/543 (47%), Gaps = 6/543 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L +M+ +GV      + S I +       E+A+++   +   G  P V  Y+  + A  
Sbjct: 173 VLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACA 232

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R+     +  +MK  G++PNV  Y+  + A  K  + + A  LL EM   G APD +
Sbjct: 233 KVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVI 292

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+T++ +  K GQ E A  L M   +      +  Y+ +I    K  + EEA  LL EM
Sbjct: 293 TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREM 352

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G+ P+VITYS+ IS+    G  E ++G+L +M + G  PN  S+  ++      GR 
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRW 412

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA DL   M   G  P+V+ YS  I         ++A+ +  +M      PNV +Y++ 
Sbjct: 413 REAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSA 472

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           ID  AK G    A ++   M ++G +P+V+ Y+ ++        + +A  L  +M  +  
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGI 532

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ V+ NT I      G  + A+ +L +M     +P+  +Y   +D   + +R KE  +
Sbjct: 533 TPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIID 592

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ E+   G+  + ++Y   +      G+  EA  LL  ML  G   D +T+N  I A  
Sbjct: 593 LLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACA 652

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G+   A  LL ++   G   PD+ S+ + +    N      A   L +M   G+ PN 
Sbjct: 653 KGGRWKEATVLLRQMPTFGL-APDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNE 711

Query: 552 ATW 554
           AT+
Sbjct: 712 ATY 714



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 251/531 (47%), Gaps = 10/531 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           + +   ++ G   +AL +  R++E G+KP  + Y+  + A     ++     + ++M   
Sbjct: 156 ATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAAR 215

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G  P+V TY+  + A  K +R   A  LL  M  +G  P+ + Y+  +S+  K GQ E A
Sbjct: 216 GTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETA 275

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +L     A+     V  Y+ +I+   K  + E AF LL EM  +G+  N+ITYS +I +
Sbjct: 276 VDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGA 335

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
               G  E ++ +L +M   G  P++ +++S +      G+  EA  L   M  EG  PN
Sbjct: 336 CAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPN 395

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            ++Y  +I      G   EA+ +  +M+ +  PP+V  YSA ID  A+A     A  +  
Sbjct: 396 AISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLR 455

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M + G +PNV++Y   +    +      A  L+ +M      P+ +T++  I   C  G
Sbjct: 456 EMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS-CAMG 514

Query: 390 RVDW--AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
           R  W  A+ L  +M++    P++ + N  ++   +    +EA +++ E+   G+  + ++
Sbjct: 515 R-QWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAIS 573

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y T +    +     E   LL +M   G   DAI++   + A    G    A+ LL  + 
Sbjct: 574 YRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDML 633

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             G  +PD+++Y S +      G  +EA + L++M   G+ P+  ++N  +
Sbjct: 634 AVGL-SPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAI 683



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 225/483 (46%), Gaps = 40/483 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ MK +GV  +  V+ + I++ R+ G  E A+ +   +   GL P V  Y+ ++DA  
Sbjct: 243 LLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACA 302

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              ++     +   M   G+  N+ TY+I++ A  K  + + A  LL EM   G APD +
Sbjct: 303 KRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVI 362

Query: 137 SYTTIVSSICKLGQVEEA----RELAM---------------------RFGSGVSV---- 167
           +Y++ +S+  K GQ EEA    RE+ M                     R+   + +    
Sbjct: 363 TYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEM 422

Query: 168 -----------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                      Y+A I+   +  + E+A WLL EM   G+ PNVI+Y++ I +    G  
Sbjct: 423 QAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRS 482

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + ++ +L +M   G  P++ ++++++    +G +  EA DL+  M R+G  P+VV+ +T 
Sbjct: 483 KIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTA 542

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I+     G  +EA+ V  +M      P+  +Y   ID  AK         +   M + G 
Sbjct: 543 INACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGL 602

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P+ ++Y   +     + ++ +A  L+  M      P+ VT+N+ I      GR   A  
Sbjct: 603 TPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATV 662

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL QM  +   P++ ++N  +D     ++   A E++ E+   G+  N  TY T ++   
Sbjct: 663 LLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACK 722

Query: 457 RAG 459
           R G
Sbjct: 723 RCG 725



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 179/401 (44%), Gaps = 12/401 (2%)

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV---GNVETS 219
           SGV    A  + L ++ +  +A        D+G     +  S + ++L +    G+   +
Sbjct: 119 SGVRAGGAGSSALPRQQRKSKA--------DKGGRQAGMPMSHLKATLREAKQYGDWRKA 170

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L +L +M  +G  P+  +++S +       +   A +L   M   G  P+V+ YS+ I  
Sbjct: 171 LDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAA 230

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
                   EAV +   M+     PNV  YSA I    K G    A  +   M + G +P+
Sbjct: 231 CAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPD 290

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V+ Y+ ++    +   +  A  L+ +M  +    N +T++  I      G+ + A+ LL 
Sbjct: 291 VITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLR 350

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M++    P++ TY+  +    +  + +EA  L+ E+   G+  N ++Y  ++    + G
Sbjct: 351 EMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRG 410

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
              EA  LL +M   G   D I ++  I A  +  +   A+ LL  +   G   P++ISY
Sbjct: 411 RWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGL-TPNVISY 469

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            S +     +G  + A   L++M   G+ P+  T++ ++ S
Sbjct: 470 NSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIAS 510



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 130/294 (44%), Gaps = 32/294 (10%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL++M   G++ +   + S I++  + G ++ A+++   +   GL P V  Y+ ++ + 
Sbjct: 452 WLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASC 511

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
               ++     ++  M+R G+ P+V + N  + A  +    + A  +L EM   G  PDA
Sbjct: 512 AMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDA 571

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +SY T                               I+   K  + +E   LL EM   G
Sbjct: 572 ISYRTA------------------------------IDACAKGDRWKEIIDLLREMSTVG 601

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+ I+Y   +S+    G  + +L +L  M   G +P++ ++ S +     GGR  EA+
Sbjct: 602 LTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEAT 661

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSM-DEAVSVSYQMEENSCPPNVTTY 308
            L  +M   G  P+V +++  I   C NG     AV V ++M      PN  TY
Sbjct: 662 VLLRQMPTFGLAPDVNSFNAAIDA-CGNGDQWGTAVEVLFEMRALGVSPNEATY 714


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 230/457 (50%), Gaps = 14/457 (3%)

Query: 115 RVDGAY-KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSG----VSVY 168
           R  G Y ++LV  G      D  S   +V  +C  G+VEE R L   R+G G       Y
Sbjct: 64  RARGLYGEMLVREG----GADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFY 119

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N LI+G C+   I     LL EM  +GI P V+TY  II  L   G++     +LG+M  
Sbjct: 120 NVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRA 179

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG +PN+  + +++          +ASD+ N+M++  F P+VV ++T+I G C  G + E
Sbjct: 180 RGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVRE 239

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ +  +       PN  +Y+ LI GF   G  + AS +   M+  G +P+++    ++ 
Sbjct: 240 ALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIH 299

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            L  +   + A  + EKMA     P+   +N  I GLC    +  A  LL++M + +  P
Sbjct: 300 GLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQP 359

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           +   Y  L+DG +R +++ +A ++   +E+     +IV YN ++ G C+ GM+ EA   +
Sbjct: 360 DKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCM 418

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLWGIC 527
             M   G   D  T+  ++  Y K+G ++ +++LL D ++      P+I +Y SL+ G C
Sbjct: 419 SSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMK--RRCKPNIFTYASLICGYC 476

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           N G    A     KM +EG+ PN   + VL+ SLF  
Sbjct: 477 NIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKK 513



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/529 (26%), Positives = 248/529 (46%), Gaps = 21/529 (3%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  P    YN ++D             +   M+  G+ P V TY  ++  L +   +   
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKV 170

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
             LL EM  +G +P+   Y T+++++CK     +A ++       RF   V  +N +I G
Sbjct: 171 ESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAG 230

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C+E  + EA  LL E + RG++PN ++Y+ +I   C  G    +  +L +M  RG  P+
Sbjct: 231 FCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPD 290

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + +  +L+ G ++ G+ ++A  +  +M     +P+   Y+ LI GLC    +  A ++  
Sbjct: 291 MITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLE 350

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M E    P+   Y+ LIDGF ++  L  A +I+  M    C P++VAY  M+K  C+  
Sbjct: 351 EMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFG 409

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
           M  +A + +  M    C P+  T+ T + G    G +  +++LL  M +  C PNI TY 
Sbjct: 410 MMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYA 469

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G   +     A +L  +++  G+  N+V Y  ++  + +   V++A      ML+ 
Sbjct: 470 SLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLN 529

Query: 475 GTKLDAITFNIIIYAY--CKQGKVNN----------AIQLLDRIRG--GGEWNPDIISYT 520
               +  T + ++     C+ G VN+             LLD  RG      +P I +Y 
Sbjct: 530 HCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYN 589

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           ++++ +C    + +A     KM N+G  P+  T+  L+   FS+ G  G
Sbjct: 590 AIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYG-FSSAGESG 637



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 137/499 (27%), Positives = 237/499 (47%), Gaps = 21/499 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M+ +G+  +   + ++I+   R G   +   +   +R  GL P V+IYN +++AL 
Sbjct: 138 LLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALC 197

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S  + + + M +    P+V T+N ++   C+   V  A KLL E   +G  P+ +
Sbjct: 198 KCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQL 257

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           SYT ++   C  G+   A +L +   G G +       ALI+GL    ++ +A  +  +M
Sbjct: 258 SYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKM 317

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +R + P+   Y+ +IS LC    +  +  +L +M  +   P+   +T+L+ G++   + 
Sbjct: 318 AERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKL 377

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  ++  M  E   P++VAY+ +I G C  G M EAV+    M +  C P+  TY+ L
Sbjct: 378 SDARKIFEFM-EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTL 436

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +DG+AK G++  + ++   M+   C PN+  Y  ++   C     + A  L  KM  E  
Sbjct: 437 VDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGL 496

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV-------N 424
            PN V +   I  L    +V  A    + M    C PN  T + L++GL+         N
Sbjct: 497 FPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSN 556

Query: 425 R--VKEAFELVTEIE------KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           R   K+A E    ++        G+   I  YN I+  +CR  M+ +A  L  KM  +G 
Sbjct: 557 RSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGC 616

Query: 477 KLDAITFNIIIYAYCKQGK 495
             D ITF  ++Y +   G+
Sbjct: 617 LPDPITFLSLLYGFSSAGE 635



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 221/466 (47%), Gaps = 7/466 (1%)

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
           ++  ++++ LC   RV+    L+     +GC P AV Y  ++   C+ G +     L   
Sbjct: 82  YSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGE 141

Query: 161 FGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
             +      V  Y A+I+ L ++  + +   LL EM  RG+ PNV  Y+T+I++LC   +
Sbjct: 142 METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRS 201

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
              +  +L QM     NP++ +F +++ G+   G   EA  L    IR G  PN ++Y+ 
Sbjct: 202 ASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTP 261

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LIHG C  G    A  +  +M      P++ T  ALI G   +G +  A  +  +M    
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+   Y  ++  LC+  M   A +L+E+M  +   P+   + T I G     ++  A 
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDAR 381

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           K+ + M++  C P+I  YN ++ G  +   +KEA   ++ + K G   +  TY T++ G 
Sbjct: 382 KIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGY 440

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            + G +  + +LL  M+    K +  T+  +I  YC  G   +A  L  +++  G + P+
Sbjct: 441 AKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLF-PN 499

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           ++ YT L+  +     + +A  Y + ML     PN AT + LV  L
Sbjct: 500 VVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGL 545



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 21/422 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++    G+  ++  +  +I+ +   G A  A  +   +   G  P +     ++  L+
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    +   M    + P+   YN+L+  LCK   +  A  LL EM  +   PD  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 137 SYTTIVSSICKLGQVEEARE----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            YTT++    +  ++ +AR+    +  +    +  YN +I G CK   ++EA   +  M 
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMR 422

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G  P+  TY+T++      G++  SL +L  M  R C PNI ++ SL+ GY   G T+
Sbjct: 423 KAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTY 482

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A DL+ +M  EG  PNVV Y+ LI  L     + +A +    M  N CPPN  T   L+
Sbjct: 483 SAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLV 542

Query: 313 DGFA---------------KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           +G                 +A        ++  +IS+G  P + AY  ++  LC++NM  
Sbjct: 543 NGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLG 602

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV-DWAMKLLDQMKQYECLPNITTYNEL 416
           +A  L +KM+ + C P+ +TF + + G    G    W   L ++ +Q E    IT Y  L
Sbjct: 603 KAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDE-FEIITKYMAL 661

Query: 417 LD 418
            +
Sbjct: 662 FN 663



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 1/228 (0%)

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G  P+     C++++L +   + +A  L  +M       +  +    ++GLC  GRV+ 
Sbjct: 40  HGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEE 99

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
              L++      C+P    YN L+DG  R   +     L+ E+E  GI   +VTY  I+H
Sbjct: 100 GRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIH 159

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            + R G + +   LLG+M   G   +   +N +I A CK    + A  +L+++     +N
Sbjct: 160 WLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMV-KSRFN 218

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PD++++ +++ G C  G ++EA   L++ +  G+ PN  ++  L+   
Sbjct: 219 PDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGF 266


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 218/440 (49%), Gaps = 6/440 (1%)

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S++ R G+ P+   Y   +   C+      A +L + M  +GCA    +Y  ++  +C  
Sbjct: 98  SSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGA 157

Query: 149 GQVEEAREL-AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G V EA  + A  +  G +    VY+ +++GLC   +  EA  LL + + +G  PNV  Y
Sbjct: 158 GMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVY 217

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + +I   C  G++E ++ I   M  +GC PN+ ++T L+ G+   G+   A  L++RMI 
Sbjct: 218 NALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIE 277

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G  PNVV Y+TLI G CS G ++ A  + + ME     PN  T   LID   K G +  
Sbjct: 278 AGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEE 337

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A Q    ++  G   N V YT M+  LC++  F  AH+L++K+  E   P+   +++ I 
Sbjct: 338 AQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLID 397

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC   ++  A+ LL+ M +     N   +  L+D  LR  R      +   +   G++ 
Sbjct: 398 GLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKP 457

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           ++VTY   +   C+ G + +A  ++ +M+  G + +  T+N +I  Y   G V+ A   L
Sbjct: 458 DVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSL 517

Query: 504 DRIRGGGEWNPDIISYTSLL 523
             +   G   P+  SYT LL
Sbjct: 518 KNMIDNG-CKPNDESYTVLL 536



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 220/469 (46%), Gaps = 36/469 (7%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           P      T++ ++ + G + +   LA R     +  Y  LIN  C    +  A   L  +
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSL 100

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +  G+ P+   Y++ +   C  G    +  +   M  RGC     ++ +LL+G    G  
Sbjct: 101 LRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMV 160

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  ++  M  +G  P+   YS ++HGLC  G   EAV++          PNV  Y+AL
Sbjct: 161 REAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNAL 220

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG+   G+L  A  I+  M S GC PNV  YT ++   C++    +A  L  +M     
Sbjct: 221 IDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGL 280

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN VT+ T I+G C  G ++ A +LL  M+     PN  T   L+D L +  R++EA +
Sbjct: 281 APNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQ 340

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
            +  + + GI++N V Y +++  +C++G    A  L+ K++ EG   DA  ++ +I   C
Sbjct: 341 FLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLC 400

Query: 492 KQGKVNNAIQLL-DRIRGGGEWN---------------------------------PDII 517
           ++ K+  AI LL D I  G + N                                 PD++
Sbjct: 401 RENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVV 460

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           +YT  +   C  G M++A   + +M++ G+ PN  T+N L++  ++NLG
Sbjct: 461 TYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG-YANLG 508



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 231/494 (46%), Gaps = 21/494 (4%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
            V+ ++I+ Y   G  E A+ +F  ++  G  P V+ Y  ++       +      +YS 
Sbjct: 215 AVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSR 274

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ PNV TY  L++  C    ++ A++LL  M   G AP+  +   ++ ++CK G+
Sbjct: 275 MIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGR 334

Query: 151 VEEARE-LAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +EEA++ L      G+ V    Y ++I+ LCK  K + A  L+ +++  G  P+   YS+
Sbjct: 335 IEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSS 394

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I  LC    +  ++ +L  M   G   N   FT L+  +L   R+     + +RM   G
Sbjct: 395 LIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAG 454

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV Y+  I   C +G M++A S+  QM ++   PN+TTY+ LI G+A  G +  A 
Sbjct: 455 VKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAF 514

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ----------------AHSLIEKMAFE 369
                MI NGC PN  +YT ++ +L + N +H                    L+E++   
Sbjct: 515 SSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKL 574

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            C   +  ++ FI+ L    R++ A   L  M+     P+   Y  +++   R+  +KEA
Sbjct: 575 QCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEA 634

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
              +  + K      + +Y  I+  +C  G    A  + G +L +    D I + I+I  
Sbjct: 635 LRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDG 694

Query: 490 YCKQGKVNNAIQLL 503
             ++G   +  +LL
Sbjct: 695 LLQKGNTADCSRLL 708



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 150/594 (25%), Positives = 244/594 (41%), Gaps = 57/594 (9%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M   G + +   + +++      G+  +A+ +F  +   G  P   +Y+ ++  L    R
Sbjct: 135 MPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 + ++    G  PNV  YN L+   C    ++ A  +   M +KGC P+  +YT 
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254

Query: 141 IVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++   CK G+VE A  L  R         V  Y  LI G C E  +E AF LL  M   G
Sbjct: 255 LICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG 314

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PN  T   +I +LC  G +E +   LG +  +G   N   +TS++      G+   A 
Sbjct: 315 LAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAH 374

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L  ++I EGF+P+   YS+LI GLC    + EA+S+   M E+    N   ++ LID  
Sbjct: 375 NLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKH 434

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            +         I +RM + G  P+VV YT  ++  CQ+     A S++ +M      PN 
Sbjct: 435 LREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNL 494

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL-------------- 421
            T+NT IKG    G V  A   L  M    C PN  +Y  LL  LL              
Sbjct: 495 TTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSIS 554

Query: 422 -------------------------------------RVNRVKEAFELVTEIEKCGIQLN 444
                                                +V+R++EA   +  ++   +  +
Sbjct: 555 LWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPS 614

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
              Y  ++    R  ++ EA + L  M+         ++  II A C++G  + A  +  
Sbjct: 615 EDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFG 674

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            I    E+N D I++  L+ G+   G   +    L  M  +   P  A ++ L 
Sbjct: 675 DIL-SKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLT 727



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 255/593 (43%), Gaps = 22/593 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++   +  L  +   G++     + S +  Y R GL   A ++F  + + G   T   Y 
Sbjct: 89  DLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYA 148

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  L           +++ M  DG  P+   Y+I++  LC   R   A  LL +   K
Sbjct: 149 ALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGK 208

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G  P+   Y  ++   C  G +E A ++     S      V  Y  LI G CK  K+E A
Sbjct: 209 GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERA 268

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M++ G+ PNV+TY+T+I   C  G++E +  +L  M   G  PN  +   L+  
Sbjct: 269 MVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDA 328

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  EA      ++++G   N V Y+++I  LC +G  D A ++  ++      P+
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              YS+LIDG  +   LL A  + N MI +G   N V +T ++    +         + +
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISD 448

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +MA     P+ VT+  FI+  C  GR++ A  ++ QM  +   PN+TTYN L+ G   + 
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG----MVVEAFQL--------LGKML 472
            V +AF  +  +   G + N  +Y  +L  + +      +V ++  L        L ++L
Sbjct: 509 LVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELL 568

Query: 473 IEGTKLD----AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            E  KL     +  ++  I    K  ++  A   L  ++      P    YT ++     
Sbjct: 569 EEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSAN-LTPSEDVYTCMIECCYR 627

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
              ++EA  +L  M+     P   ++  ++ +L           I  DI++ +
Sbjct: 628 MKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKE 680



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 214/474 (45%), Gaps = 5/474 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++IN+Y   G    A +    +   GL P    Y   +        F+    ++  M
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            + G     FTY  LL+ LC    V  A  +   M   GCAPD+  Y+ +V  +C  G+ 
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 152 EEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            EA  L        F   V+VYNALI+G C    +E A  +   M  +G  PNV TY+ +
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C  G VE ++ +  +M   G  PN+ ++T+L++G    G    A  L + M   G 
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN      LI  LC +G ++EA      + +     N   Y+++ID   K+G   GA  
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +  ++I+ G  P+   Y+ ++  LC+ N   +A SL+  M       N V F   I    
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHL 435

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              R D    + D+M      P++ TY   +    +  R+++A  ++ ++   G++ N+ 
Sbjct: 436 REFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT 495

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           TYNT++ G    G+V +AF  L  M+  G K +  ++ +++    K+   ++ +
Sbjct: 496 TYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLV 549



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 190/411 (46%), Gaps = 5/411 (1%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+  L +   + +   L   M  R    N+ TY+T+I++ C  G++  +   L  +  
Sbjct: 47  NTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKRHLSSLLR 102

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  P+ H++TS + GY   G    A  L+  M + G       Y+ L+ GLC  G + E
Sbjct: 103 AGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVRE 162

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A++V   M  + C P+   YS ++ G   AG    A  +    +  G  PNV  Y  ++ 
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C       A  + + M  + C PN  T+   I G C  G+V+ AM L  +M +    P
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ TY  L+ G      ++ AF L+  +E CG+  N  T   ++  +C+ G + EA Q L
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
           G ++ +G K++ + +  +I A CK GK + A  L+ +I   G + PD   Y+SL+ G+C 
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG-FVPDAHMYSSLIDGLCR 401

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
              + EA   L  M+  G+  N   + +L+           P  I D + A
Sbjct: 402 ENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAA 452



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 185/381 (48%), Gaps = 5/381 (1%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P +   +T++ +L   G +     +  +M VR    N+H++T+L+  Y   G    A   
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKRH 96

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + ++R G  P+  AY++ + G C  G    A  +   M +  C     TY+AL+ G   
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           AG +  A  ++  M  +GC+P+   Y+ MV  LC      +A +L+     +   PN   
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  I G C  G ++ A+ +   M+   CLPN+ TY +L+ G  +  +V+ A  L + + 
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G+  N+VTY T++ G C  G +  AF+LL  M   G   +  T  ++I A CK G++ 
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A Q L  +   G     +I YTS++  +C SG    A   +QK++ EG  P+   ++ L
Sbjct: 337 EAQQFLGSLVQKGIKVNQVI-YTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSL 395

Query: 558 VRSLFSNLGHLGPVYILDDIM 578
           +  L      L  + +L+D++
Sbjct: 396 IDGLCRENKLLEAISLLNDMI 416



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 213/509 (41%), Gaps = 94/509 (18%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           + + M+ +G   +   +  +I  + + G  E+A+ ++ R+ E GL P V  Y  ++    
Sbjct: 236 IFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQC 295

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +E        +  +M+  G+ PN +T  +L+ ALCK+ R++ A + L  +  KG   + V
Sbjct: 296 SEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQV 355

Query: 137 SYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            YT+++ ++CK G+ + A  L  +     F     +Y++LI+GLC+E+K+ EA  LL +M
Sbjct: 356 IYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415

Query: 192 V-------------------------------DR----GIDPNVITYSTIISSLCDVGNV 216
           +                               DR    G+ P+V+TY+  I S C  G +
Sbjct: 416 IESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRM 475

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +  ++ QM   G  PN+ ++ +L+KGY   G   +A      MI  G  PN  +Y+ L
Sbjct: 476 EDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535

Query: 277 I---------HGL---------------------------CSNGS--------------- 285
           +         H L                           CS+ S               
Sbjct: 536 LGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDR 595

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           ++EA S    M+  +  P+   Y+ +I+   +   L  A +  + M+     P + +Y  
Sbjct: 596 LEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRF 655

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++  LC+   FH A S+   +  +    + + +   I GL   G      +LL  M++  
Sbjct: 656 IICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQN 715

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVT 434
           C P    Y+ L      +    EA E+ T
Sbjct: 716 CRPGSAIYSRLTG---EITVTSEAQEIAT 741



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/365 (22%), Positives = 152/365 (41%), Gaps = 21/365 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +  + DG   L+Q++  EG      ++ S+I+   R     +A+ +   + E G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++     +  ++D  L E R      I   M   G++P+V TY + +++ C++ R++ A 
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVS----VYNALINGL 175
            ++++M + G  P+  +Y T++     LG V +A   L     +G       Y  L+  L
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLL 539

Query: 176 CKEHKIEE------AFW----------LLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
            K++   +      + W          LL E++          Y   I  L  V  +E +
Sbjct: 540 LKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEA 599

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
              L  M      P+   +T +++         EA    + M++  +LP + +Y  +I  
Sbjct: 600 KSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICA 659

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           LC  GS   A S+   +       +   +  LIDG  + GN    S++ + M    C P 
Sbjct: 660 LCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPG 719

Query: 340 VVAYT 344
              Y+
Sbjct: 720 SAIYS 724


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 249/509 (48%), Gaps = 29/509 (5%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           + +L+   K+  +S S     S   ++      + A+ +F R+      P    +N IL 
Sbjct: 40  ISFLILLTKINFISYS-----STSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILG 94

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN----RVDGAYKLLVEMGNK 129
           +L+    +  +  +   M+  G++PN+F  NIL+   C+      ++  A+    ++   
Sbjct: 95  SLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVAL 154

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEA 184
           G   D VSY T++  +CK+G+   A +L  R    +      +YN +I G+CK+  + +A
Sbjct: 155 GFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDA 214

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F L  EMV +GI PNV+TYS +IS    VG ++ ++ +  ++ +    P+ ++F  L+ G
Sbjct: 215 FDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDG 274

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +    +  E   ++  M+++G +P+VV Y++L+ G C    ++ A S+   M +    P+
Sbjct: 275 FCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPD 334

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + +Y+ LI+GF K   +  A  ++N M      PNVV Y  ++  L ++     A  L++
Sbjct: 335 IRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVD 394

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M     PPN +T+N+ I  L    +VD A+ L+ + K     P++ TY  L+DGL +V 
Sbjct: 395 QMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVE 454

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
                          G  + + TYN ++HG C+ G+  EA  LL KM       +A+T+ 
Sbjct: 455 ---------------GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYE 499

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           I I +     + + A +L   +   G  N
Sbjct: 500 ITIRSLLDNNENDKAEKLFREMITRGLLN 528



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 211/458 (46%), Gaps = 30/458 (6%)

Query: 136 VSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           +SY++  ++      V++A  L  R            +N ++  L K         L  +
Sbjct: 52  ISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQK 111

Query: 191 MVDRGIDPNVITYSTIISSLCDVG----NVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           M  RGI PN+   + +I   C +G     +  +     ++   G + +  S+ +L+ G  
Sbjct: 112 MEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLC 171

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G T  A DL  R+  +    N V Y+T+I+G+C +  +++A  +  +M      PNV 
Sbjct: 172 KVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVV 231

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TYSALI GF   G L  A  ++N++I     P+   +  +V   C++    +  ++   M
Sbjct: 232 TYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMM 291

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   P+ VT+N+ + G C    V+ A  + + M Q    P+I +YN L++G  ++ +V
Sbjct: 292 MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKV 351

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A  L  E+    I  N+VTYN+++ G+ ++G +  A QL+ +M   G   + +T+N I
Sbjct: 352 DKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSI 411

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL--------------------LWGI 526
           I A  K  +V+ AI L+ + +  G   P + +YT L                    + G 
Sbjct: 412 IDALFKTHQVDKAIALITKFKDQG-IQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGF 470

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           C  G   EA   L KM +    PN  T+ + +RSL  N
Sbjct: 471 CKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDN 508



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 175/360 (48%), Gaps = 26/360 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+S +   + ++I+ +  VG  + A+ +F +I    +KP    +N ++D   
Sbjct: 217 LYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFC 276

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + +      +++ M + G+ P+V TYN L+   C    V+ A  +   M   G  PD  
Sbjct: 277 KDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR 336

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY  +++  CK+ +V++A  L            V  YN+LI+GL K  +I  A  L+ +M
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 396

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            DRG+ PN++TY++II +L     V+ ++ ++ +   +G  P+++++T L+ G       
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK---- 452

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
                       EG+   V  Y+ +IHG C  G  DEA+S+  +M+++SC PN  TY   
Sbjct: 453 -----------VEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEIT 501

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I           A +++  MI+ G      +Y       C +   HQ+ ++++    ++C
Sbjct: 502 IRSLLDNNENDKAEKLFREMITRGLLNRSASYP------CSSMKIHQSLTMVQHTWCDSC 555



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 125/259 (48%), Gaps = 5/259 (1%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  +YS+    F    ++  A  ++NR++    +P    +  ++  L ++  +H   SL 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCG----RVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           +KM F    PN    N  I   C  G    ++  A    D++       +  +Y  L+ G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L +V   + A +L+  ++   +QLN V YNT+++G+C+   V +AF L  +M+ +G   +
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +T++ +I  +   GK+ +AI L ++I       PD  ++  L+ G C    M+E     
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILEN-IKPDGYTFNILVDGFCKDRKMKEGKTVF 288

Query: 540 QKMLNEGICPNFATWNVLV 558
             M+ +GI P+  T+N L+
Sbjct: 289 AMMMKQGIIPDVVTYNSLM 307



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 108/221 (48%), Gaps = 10/221 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++  + +   M   GV+     +  +IN + ++   ++A+ +F  +    + P V  YN
Sbjct: 315 EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYN 374

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    R S    +   M   G+ PN+ TYN ++ AL K ++VD A  L+ +  ++
Sbjct: 375 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 434

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           G  P   +YT ++  +CK+    E  ++       V+ YN +I+G CK+   +EA  LL 
Sbjct: 435 GIQPSMYTYTILIDGLCKV----EGYDIT------VNTYNVMIHGFCKKGLFDEALSLLS 484

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +M D    PN +TY   I SL D    + +  +  +M  RG
Sbjct: 485 KMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRG 525


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 131/522 (25%), Positives = 253/522 (48%), Gaps = 5/522 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    ++ E+D    L + M+  G+      + ++I+ Y + G+     K+F +    G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  V +++  +D  +     +  + +Y  M   G+ PNV TY IL+K LC++ R+  A+
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            +  ++  +G  P  V+Y++++   CK G +     L      M +   V +Y  L++GL
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K+  +  A     +M+ + I  NV+ ++++I   C +   + +L +   M + G  P++
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT++++  ++ GR  EA  L+ RM + G  P+ +AY TLI   C +      + +   
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+ N    ++   + +I    K   +  AS+ +N +I     P++V Y  M+   C    
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  + E +      PNTVT    I  LC    +D A+++   M +    PN  TY  
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+D   +   ++ +F+L  E+++ GI  +IV+Y+ I+ G+C+ G V EA  +  + +   
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
              D + + I+I  YCK G++  A  L + +   G    D++
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 813



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/547 (28%), Positives = 262/547 (47%), Gaps = 11/547 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLK-PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN- 99
           R G+ ++AL++F    + G+  P   +Y  +L++L+  +R  +I   +  + R G+EP+ 
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVY-RMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELA 158
           V  +  +L AL     V  A      +  +G     VS   ++  +  + Q+E A R L+
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLS 275

Query: 159 MRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +    G    V  +  LING CK  +++ AF L   M  RGI+P++I YST+I      G
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +     +  Q   +G   ++  F+S +  Y+  G    AS ++ RM+ +G  PNVV Y+
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI GLC +G + EA  +  Q+ +    P++ TYS+LIDGF K GNL     ++  MI  
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P+VV Y  +V  L +  +   A     KM  ++   N V FN+ I G C   R D A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +K+   M  Y   P++ T+  ++   +   R++EA  L   + K G++ + + Y T++  
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+        QL   M       D    N++I+   K  ++ +A +  + +   G+  P
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEP 634

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           DI++Y +++ G C+   + EA    + +      PN  T  +L+  L  N    G + + 
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694

Query: 575 DDIMANK 581
             IMA K
Sbjct: 695 -SIMAEK 700



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 135/555 (24%), Positives = 258/555 (46%), Gaps = 40/555 (7%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   +AL     + E G +  +   N +L  L + ++  + + + S +   G  PNV T+
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTF 289

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMR 160
             L+   CK   +D A+ L   M  +G  PD ++Y+T++    K G +    +L   A+ 
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349

Query: 161 FGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G    V V+++ I+   K   +  A  +   M+ +GI PNV+TY+ +I  LC  G +  
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           + G+ GQ+  RG  P+I +++SL+ G+   G       L+  MI+ G+ P+VV Y  L+ 
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GL   G M  A+  S +M   S   NV  +++LIDG+ +      A +++  M   G  P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V  +T +++V        +A  L  +M      P+ + + T I   C   +    ++L 
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D M++ +   +I   N ++  L + +R+++A +    + +  ++ +IVTYNT++ G C  
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-------- 510
             + EA ++   + +     + +T  I+I+  CK   ++ AI++   +   G        
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709

Query: 511 ----EW----------------------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
               +W                      +P I+SY+ ++ G+C  G + EA     + ++
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 769

Query: 545 EGICPNFATWNVLVR 559
             + P+   + +L+R
Sbjct: 770 AKLLPDVVAYAILIR 784



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 5/307 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             D    + + M + G+      F +V+      G  E+AL +F+R+ + GL+P    Y 
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA     + ++   ++  M+R+ +  ++   N+++  L K +R++ A K    +   
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
              PD V+Y T++   C L +++EA  +        FG        LI+ LCK + ++ A
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +   M ++G  PN +TY  ++       ++E S  +  +M  +G +P+I S++ ++ G
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  EA++++++ I    LP+VVAY+ LI G C  G + EA  +   M  N   P+
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810

Query: 305 VTTYSAL 311
                AL
Sbjct: 811 DLLQRAL 817


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 257/531 (48%), Gaps = 13/531 (2%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILD-ALLAENRFSMINPIYSNMKR--DGMEPN 99
            G   +A  M   +R  GL   V+  N +L   L     F+     +  M R   G+ P+
Sbjct: 121 AGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPD 180

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
             ++  L+   C+  R + A  LL  M  +G   D+ + T +V + C+ G+     +L  
Sbjct: 181 HRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFR 240

Query: 160 RFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R         +  Y+A I+GLC+   +++AF +L EMV +G+ PNV T++++I  LC +G
Sbjct: 241 RMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300

Query: 215 NVETSLGILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
            +E +  +  ++       PN+H++T ++ GY   G+   A  L  RM+ +G  PN   Y
Sbjct: 301 WMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLIHG C  GS D A  +  +M+     PN+ TY+A+I GF K G +  A ++     S
Sbjct: 361 TTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATS 420

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G   + V YT ++   C+      A  L ++MA ++C P+  T+ T I   C   +++ 
Sbjct: 421 QGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQ 480

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           + +L D+      +P   TY  ++ G  R+ ++  A ++   + + G   + +TY  ++ 
Sbjct: 481 SQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALIS 540

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +C+   + EA  L   ML +      +T   + Y YC++ K+  A+  LDR+    + +
Sbjct: 541 SLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQAH 600

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
               +  +L+  +   G +  A ++L+ +L++    + AT+   + S + +
Sbjct: 601 ----TADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYES 647



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 199/463 (42%), Gaps = 44/463 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G          V+ ++ R G       +F R+ E G  P +  Y+  +D L 
Sbjct: 203 LLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE----------- 125
                     +   M   G++PNV+T+  L+  LCK   ++ A++L ++           
Sbjct: 263 ERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNV 322

Query: 126 -------------------------MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
                                    M  +G AP+  +YTT++   CK G  + A EL  +
Sbjct: 323 HTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNK 382

Query: 161 -----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                F   +  YNA+I G CK+ KI+EA+ +L     +G+  + +TY+ +I+  C  G+
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGH 442

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  +L +  QM  + C+P+IH++T+++  Y    +  ++  L+++ +  G +P    Y++
Sbjct: 443 ITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +I G C  G +  A+ V  +M ++ C P+  TY ALI    K   L  A  ++  M+   
Sbjct: 503 MIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKH 562

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P  V    +    C+ +    A S ++++          T +  ++ L   G +D A 
Sbjct: 563 LVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---QAHTADALVRKLSTVGNLDAAS 619

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
             L  +       +  TY   ++     NR   A E+  +I K
Sbjct: 620 LFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISK 662



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 152/362 (41%), Gaps = 49/362 (13%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL +M  +G++ +   + ++I+ + + G  ++A ++  +++  G  P +  YN I+ 
Sbjct: 341 AEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIG 400

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               + +      +       G+  +  TY IL+   CK   +  A  L  +M  K C P
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHP 460

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV--------YNALINGLCKEHKIEEAF 185
           D  +YTTI++  C+  Q+E++++L   F   +S+        Y ++I G C+  K+  A 
Sbjct: 461 DIHTYTTIIAMYCQQRQMEQSQQL---FDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSAL 517

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +   MV  G  P+ ITY  +ISSLC    +E                            
Sbjct: 518 KVFERMVQHGCLPDSITYGALISSLCKESRLE---------------------------- 549

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
                  EA  L+  M+ +  +P  V   TL +  C    +  AVS   ++++       
Sbjct: 550 -------EARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQ---QA 599

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T  AL+   +  GNL  AS     ++    + +   YT  +    ++N +  A  + EK
Sbjct: 600 HTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEK 659

Query: 366 MA 367
           ++
Sbjct: 660 IS 661



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 14/266 (5%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K +I     +L+    +G+   +  +  +I  + + G    AL +F ++ E    P + 
Sbjct: 404 KKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIH 463

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  I+     + +      ++      G+ P   TY  ++   C+  ++  A K+   M
Sbjct: 464 TYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERM 523

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVY--------NALINGLCKE 178
              GC PD+++Y  ++SS+CK  ++EEAR L   F + +  +          L    C+ 
Sbjct: 524 VQHGCLPDSITYGALISSLCKESRLEEARAL---FETMLDKHLVPCDVTRVTLAYEYCRR 580

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            KI  A   L  +  R       T   ++  L  VGN++ +   L  +  +    +  ++
Sbjct: 581 DKITIAVSFLDRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATY 637

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIRE 264
           TS +       R   AS++  ++ + 
Sbjct: 638 TSFINSCYESNRYALASEISEKISKR 663


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 253/506 (50%), Gaps = 18/506 (3%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P ++  N +L AL     F  +  + S M       N+ TY  L+ A C    +  A + 
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCK 177
           L  + + G APD+ +YT+ V   C+ G +  A R   +    G       Y AL++GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
              + EA  +   M      P+   Y+T++  LC+ G  E +  +L +    G  PNI  
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +L+ GY   G    A  ++  M      PNV  Y+ LIHGLC +G ++ A+ +  +M 
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PNV TY+ALI G    G+L  A ++ + M +NG  PN   ++ ++  LC+     
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A   +  +  +    N V + + I GLC  G++D A +L+ +M     +P+  +Y+ L+
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL R  ++ +A  ++ ++ + GIQ + VTY  I+  + R        ++  KM+  G  
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 478 LDAITFNIIIYAYCKQGKVNNA----IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            D +T+ + + +YC++G++ +A    +Q++DR    G + P++++Y +L+ G  N G + 
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR----GVF-PNLVTYNTLIRGYANLGLVS 509

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVR 559
           +AF   + M+ +G  PN  ++ VL+R
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLR 535



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 231/477 (48%), Gaps = 36/477 (7%)

Query: 140 TIVSSICKLGQVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           T++ ++ +     +   LA R     +  Y  LIN  C    I  A   L  ++  G+ P
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAP 105

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +   Y++ +   C  G +  +  +   M +RGC     ++T+LL G L  G   EA  ++
Sbjct: 106 DSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVF 165

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +   P+   Y+T++HGLC  G  +EA  +  +   N   PN+  Y+ALIDG+  A
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A +++  M  N CSPNV  YT ++  LC++    +A  L  +M      PN VT+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I+G C  G +  A +LL  M+    +PN  T++ L+D L +  +V+EA   +  + K
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+++N V Y +++ G+C+ G +  A +L+ KM+ EG   DA +++ +I   C+Q K++ 
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 499 AIQLLDRIRGGG----------------------------------EWNPDIISYTSLLW 524
           A  +L+ +   G                                    NPDI++YT  + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             C  G M++A   + +M++ G+ PN  T+N L+R  ++NLG +   +   ++M  K
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG-YANLGLVSQAFSTFEVMVGK 521



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 231/509 (45%), Gaps = 8/509 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   +  L  +   G++     + S +  Y R G+   A ++F  +   G   T   Y 
Sbjct: 87  DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYT 146

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  LL          ++  M+ D   P+   Y  ++  LC+  R + A  LL E  + 
Sbjct: 147 ALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSN 206

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y  ++   C  G++E A ++       R    V  Y  LI+GLCK  K+E A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   MV+ G++PNV+TY+ +I   C+ G+++ +  +L  M   G  PN  +F+ L+  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  EA      ++++G   N V Y++LI GLC  G +D A  +  +M      P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +YS+LIDG  +   L  A+ +   M+  G   + V YT ++  L +         + +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM      P+ VT+  F++  C  GR++ A  ++ QM      PN+ TYN L+ G   + 
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM---VVEAFQLLGKMLIEGTKLDAI 481
            V +AF     +   G + N  +Y  +L  V +       V+ +++     ++ +  D I
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEI 566

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
            + I+IY   ++G V     LL  ++  G
Sbjct: 567 VWKILIYGLLQKGSVAEFSSLLSVMKEHG 595



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 199/406 (49%), Gaps = 10/406 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ ++I+ Y   G  E ALK+F  +      P V+ Y  ++  L    +      ++S M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+EPNV TY  L++  C    +  A++LL  M   G  P+  +++ ++ ++CK  +V
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 152 EEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA+  L      GV     VY +LI+GLCK  KI+ A  L+ +M+  G  P+  +YS++
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC    +  +  +L  M  +G   +  ++T ++   +    +     ++++MI  G 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++V Y+  +   C  G M++A S+  QM +    PN+ TY+ LI G+A  G +  A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL--IEKMA-FENCPPNTVTFNTFIK 383
            +  M+  G  PN  +YT +++++ + +    +  +  I  M   +    + + +   I 
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIY 573

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV-NRVKE 428
           GL   G V     LL  MK++   P+  T N ++ G + V N V+E
Sbjct: 574 GLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITGEITVTNEVQE 618


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 253/524 (48%), Gaps = 15/524 (2%)

Query: 45  LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           +  +AL+   R+R+    P     N  +  L+  N   +     + +   G  P+  ++N
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFG 162
            ++  +CK  +V  A  ++  M   GC PD +SY +++   C+ G +  A  +  ++R  
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120

Query: 163 SG------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            G      +  +N+L NG  K   ++E F  +  M+ +   PNV+TYST I + C  G +
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDTFCKSGEL 179

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +L     M     +PN+ +FT L+ GY   G    A  L+  M R     NVV Y+ L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G M  A  +  +M E+   PN   Y+ +IDGF + G+   A +   +M++ G 
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             ++ AY  ++  LC N    +A  ++E M   +  P+ V F T +      GR+  A+ 
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +  ++ +    P++   + ++DG+ +  ++ EA      +  C  + N V Y  ++  +C
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-----VYFCIEKANDVMYTVLIDALC 414

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G  +E  +L  K+   G   D   +   I   CKQG + +A +L  R+   G    D+
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL-LDL 473

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           ++YT+L++G+ + G M EA     +MLN GI P+ A +++L+R+
Sbjct: 474 LAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 245/484 (50%), Gaps = 15/484 (3%)

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
           S +++    P+ FT N  +  L  +N    + K L  + ++G  P   S+ ++VS +CKL
Sbjct: 10  SRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKL 69

Query: 149 GQVEEARELAM---RFGSGVSV--YNALINGLCKEHKIEEAFWLLCEM-VDRGI--DPNV 200
           GQV+ A ++     RFG    V  YN+LI+G C+   I  A  +L  +    G    P++
Sbjct: 70  GQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDI 129

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ++++++ +    +  ++     +G M ++ C+PN+ ++++ +  +   G    A   ++ 
Sbjct: 130 VSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHS 188

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M R+   PNVV ++ LI G C  G ++ AVS+  +M       NV TY+ALIDGF K G 
Sbjct: 189 MKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGE 248

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A ++++RM+ +   PN + YT ++    Q      A   + KM  +    +   +  
Sbjct: 249 MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GLCG G++  A ++++ M++ + +P++  +  +++   +  R+K A  +  ++ + G
Sbjct: 309 IISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
            + ++V  +T++ G+ + G + EA        IE  K + + + ++I A CK+G      
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAIVYF---CIE--KANDVMYTVLIDALCKEGDFIEVE 423

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L  +I   G   PD   YTS + G+C  G + +AF    +M+ EG+  +   +  L+  
Sbjct: 424 RLFSKISEAG-LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYG 482

Query: 561 LFSN 564
           L S 
Sbjct: 483 LASK 486



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 248/499 (49%), Gaps = 23/499 (4%)

Query: 24  EGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSM 83
            G +     F SV++   ++G  + A  + + +  FG +P V  YN ++D          
Sbjct: 50  RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109

Query: 84  INPIYSNMKRDG---MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN--KGCAPDAVSY 138
            + +  +++       +P++ ++N L     K   +D   ++ V MG   K C+P+ V+Y
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD---EVFVYMGVMLKCCSPNVVTY 166

Query: 139 TTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +T + + CK G+++ A +   +M+       V  +  LI+G CK   +E A  L  EM  
Sbjct: 167 STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR 226

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
             +  NV+TY+ +I   C  G ++ +  +  +M      PN   +T+++ G+   G +  
Sbjct: 227 VRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDN 286

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A     +M+ +G   ++ AY  +I GLC NG + EA  +   ME++   P++  ++ +++
Sbjct: 287 AMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMN 346

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA--HSLIEKMAFENC 371
            + K+G +  A  +++++I  G  P+VVA + M+  + +N   H+A  +  IEK      
Sbjct: 347 AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK------ 400

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             N V +   I  LC  G      +L  ++ +   +P+   Y   + GL +   + +AF+
Sbjct: 401 -ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L T + + G+ L+++ Y T+++G+   G++VEA Q+  +ML  G   D+  F+++I AY 
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519

Query: 492 KQGKVNNAIQ-LLDRIRGG 509
           K+G +  A   LLD  R G
Sbjct: 520 KEGNMAAASDLLLDMQRRG 538



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 185/387 (47%), Gaps = 5/387 (1%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           + EA   L  +      P+  T +  I  L +      SL  L  +  RG  P+  SF S
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++      G+   A D+ + M R G  P+V++Y++LI G C NG +  A  V   +  + 
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121

Query: 301 ---CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
              C P++ ++++L +GF+K   +L    ++  ++   CSPNVV Y+  +   C++    
Sbjct: 122 GFICKPDIVSFNSLFNGFSKM-KMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A      M  +   PN VTF   I G C  G ++ A+ L  +M++     N+ TY  L+
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DG  +   ++ A E+ + + +  ++ N + Y TI+ G  + G    A + L KML +G +
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
           LD   + +II   C  GK+  A ++++ +    +  PD++ +T+++     SG M+ A  
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDME-KSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSN 564
              K++  G  P+    + ++  +  N
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKN 386



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 141/298 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +K E+   + +  +M  + V  +  V+ ++I+ + + G ++ A+K   ++   G
Sbjct: 239 LIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++  +  Y  I+  L    +      I  +M++  + P++  +  ++ A  K+ R+  A 
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  ++  +G  PD V+ +T++  I K GQ+ EA        +   +Y  LI+ LCKE  
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGD 418

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             E   L  ++ + G+ P+   Y++ I+ LC  GN+  +  +  +M   G   ++ ++T+
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           L+ G    G   EA  +++ M+  G  P+   +  LI      G+M  A  +   M+ 
Sbjct: 479 LIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 229/464 (49%), Gaps = 21/464 (4%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           ++ L E+AL M++++   G   T++  N +L  L+   RF ++  IY  M  +G+ P+V 
Sbjct: 127 KMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVI 183

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
           T+  L+   C+   +  A ++  EM  KG  P  + YT ++  +C   ++EEA  +  AM
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243

Query: 160 R---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           R       V  YN L++G CK    ++A  L  +M+  G+ P+V+T+  +I  LC  G +
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +   M      PNI  + SL+  Y   G   EA  L+  + R    P+V  YS L
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLCS    +EA ++  +M +     N  TY++LIDG  K G +  A +I ++M  NG 
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV+ ++ ++   C+      A  +  +M  ++  P+ VT+   I G C  G +  A+K
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE-----IEKCGIQ--------L 443
           L   M      PN  T + LLDGL +  ++ +A EL TE       +C +          
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT 543

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           N V Y  ++HG+C+ G   +A +L   M   G + D + + +++
Sbjct: 544 NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVML 587



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 235/476 (49%), Gaps = 20/476 (4%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           + G  E   +++  +   GL P+V  +  ++D    +        ++  M+  G+ P V 
Sbjct: 159 KTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVI 218

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
            Y IL++ LC +N+++ A  +   M   G  P+  +Y T++   CKL   ++A  L    
Sbjct: 219 VYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDM 278

Query: 161 FGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            G G    V  +  LI+GLCK  +++ A  L   M+   + PN+  Y+++I + C VG+V
Sbjct: 279 LGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDV 338

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             ++ +  ++     +P++ +++ L++G     RT EA +++ +M +EG L N V Y++L
Sbjct: 339 SEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSL 398

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G MD+A+ +  QM EN   PNV T+S LIDG+ K  NL  A  I++ M+    
Sbjct: 399 IDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSL 458

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           SP+VV YT M+   C+     +A  L   M      PN  T +  + GLC  G++  A++
Sbjct: 459 SPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALE 518

Query: 397 LLDQMKQYEC-------------LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           L  +  +++              L N   Y  L+ GL +  +  +A +L +++ + G+Q 
Sbjct: 519 LFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQP 578

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           + V Y  +L G+ +   ++    L   ML  G   ++    I+   Y + G + +A
Sbjct: 579 DEVIYVVMLRGLFQVKYIL--MMLHADMLKFGVIPNSAVHVILCECYQESGFLKSA 632



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 257/541 (47%), Gaps = 49/541 (9%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +++ S++     + A     R++     P V  Y  ++  L    +  ++    S   + 
Sbjct: 87  NLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLC---KMELVEEALSMYHKV 141

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G    +   N+LL  L K  R +  +++  EM + G +P  +++ T              
Sbjct: 142 GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGT-------------- 187

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                           LI+G C++  +  A  +  EM  +GI P VI Y+ +I  LC   
Sbjct: 188 ----------------LIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDN 231

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +E +  +   M   G  PN++++ +L+ GY       +A  L+  M+ EG +P+VV + 
Sbjct: 232 KIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFG 291

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI GLC  G M  A ++   M + S  PN+  Y++LID + K G++  A  ++  +   
Sbjct: 292 ILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERF 351

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
             SP+V  Y+ +++ LC  +   +A ++ EKM  E    N+VT+N+ I G C  G++D A
Sbjct: 352 EVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKA 411

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +++  QM +    PN+ T++ L+DG  ++  ++ A  + +E+    +  ++VTY  ++ G
Sbjct: 412 LEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR--------- 505
            C+ G + EA +L   ML  G   +  T + ++   CK GK+++A++L            
Sbjct: 472 HCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRC 531

Query: 506 -IRGGGEWNPDI---ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +  GG   P +   ++YT+L+ G+C  G   +A      M   G+ P+   + V++R L
Sbjct: 532 NVDAGGS-KPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590

Query: 562 F 562
           F
Sbjct: 591 F 591



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 220/426 (51%), Gaps = 18/426 (4%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M   G+S S   F ++I+   R G   +A +MF  +R  G+ PTV +Y  ++  L ++
Sbjct: 171 EEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSD 230

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           N+      ++  M+  G+ PNV+TYN L+   CK      A +L  +M  +G  PD V++
Sbjct: 231 NKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290

Query: 139 TTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
             ++  +CK G+++ AR L    ++F     ++VYN+LI+  CK   + EA  L  E+  
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
             + P+V TYS +I  LC V   E +  I  +M   G   N  ++ SL+ G    G+  +
Sbjct: 351 FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDK 410

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A ++ ++M   G  PNV+ +STLI G C   ++  A+ +  +M   S  P+V TY+A+ID
Sbjct: 411 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 470

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI-EKMAFEN-- 370
           G  K G++  A ++++ M+ NG +PN    +C++  LC++     A  L  EK+ F+   
Sbjct: 471 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPR 530

Query: 371 -------CPP---NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
                    P   N V +   I GLC  G+   A+KL   M++Y   P+   Y  +L GL
Sbjct: 531 CNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590

Query: 421 LRVNRV 426
            +V  +
Sbjct: 591 FQVKYI 596



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 199/414 (48%), Gaps = 22/414 (5%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q +  +M+V+G+  +  V+  +I         E+A  M   +RE G+ P V  YN ++D 
Sbjct: 202 QEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDG 261

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
                       +Y +M  +G+ P+V T+ IL+  LCK   +  A  L V M      P+
Sbjct: 262 YCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPN 321

Query: 135 AVSYTTIVSSICKLGQVEEARELAM---RF--GSGVSVYNALINGLCKEHKIEEAFWLLC 189
              Y +++ + CK+G V EA  L +   RF     V  Y+ LI GLC   + EEA  +  
Sbjct: 322 IAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFE 381

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           +M   GI  N +TY+++I   C  G ++ +L I  QM   G  PN+ +F++L+ GY    
Sbjct: 382 KMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIR 441

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
               A  +++ M+ +   P+VV Y+ +I G C  GSM EA+ +   M +N   PN  T S
Sbjct: 442 NLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTIS 501

Query: 310 ALIDGFAKAGNLLGASQIWNRMI----------SNGCSP---NVVAYTCMVKVLCQNNMF 356
            L+DG  K G +  A +++   I          + G  P   N VAYT ++  LCQ+  F
Sbjct: 502 CLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQF 561

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD-QMKQYECLPN 409
            +A  L   M      P+ V +   ++GL    +V + + +L   M ++  +PN
Sbjct: 562 SKAVKLFSDMRRYGLQPDEVIYVVMLRGLF---QVKYILMMLHADMLKFGVIPN 612



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 192/370 (51%), Gaps = 18/370 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    +I+  + + + M+  GV  +   + ++++ Y ++  A+QAL+++  +   G
Sbjct: 223 LIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG 282

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  +  ++D L           ++ NM +  + PN+  YN L+ A CK   V  A 
Sbjct: 283 LVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAM 342

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
            L +E+     +PD  +Y+ ++  +C + + EEA  +  +       +    YN+LI+G 
Sbjct: 343 ALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGC 402

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE K+++A  +  +M + G++PNVIT+ST+I   C + N++ ++GI  +M ++  +P++
Sbjct: 403 CKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDV 462

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T+++ G+   G   EA  L++ M+  G  PN    S L+ GLC +G + +A+ +  +
Sbjct: 463 VTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522

Query: 296 MEENSCP----------PNVT---TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
             E   P          P++T    Y+ALI G  + G    A ++++ M   G  P+ V 
Sbjct: 523 KIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVI 582

Query: 343 YTCMVKVLCQ 352
           Y  M++ L Q
Sbjct: 583 YVVMLRGLFQ 592



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 155/350 (44%), Gaps = 51/350 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  E+   + L   M    V+ +  V+ S+I++Y +VG   +A+ +F  +  F 
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFE 352

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ ++  L + +R      I+  M ++G+  N  TYN L+   CK  ++D A 
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++  +M   G  P+ ++++T++   CK+  ++ A     E+ ++     V  Y A+I+G 
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 472

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-------- 227
           CK   ++EA  L  +M+D GI PN  T S ++  LC  G +  +L +  +          
Sbjct: 473 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCN 532

Query: 228 --VRGCNPNIH---SFTSLLKGYLLGGRTHEASDLWNRMIREGF---------------- 266
               G  P++    ++T+L+ G    G+  +A  L++ M R G                 
Sbjct: 533 VDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQ 592

Query: 267 -----------------LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
                            +PN   +  L      +G +  A + S  +EEN
Sbjct: 593 VKYILMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEEN 642



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 8/276 (2%)

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A S   +++ +   PNV  Y  LI    K   +  A  +++++   G +  + A   ++ 
Sbjct: 101 AFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLY 155

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
           VL +   F     + E+M      P+ +TF T I G C  G +  A ++ D+M+    +P
Sbjct: 156 VLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            +  Y  L+ GL   N+++EA  +   + + G+  N+ TYNT++ G C+     +A +L 
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY 275

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL-LDRIRGGGEWNPDIISYTSLLWGIC 527
             ML EG   D +TF I+I   CK G++  A  L ++ I+      P+I  Y SL+   C
Sbjct: 276 QDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFS--VTPNIAVYNSLIDAYC 333

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             G + EA     ++    + P+  T+++L+R L S
Sbjct: 334 KVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCS 369



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 414 NELLDGLLRVNR----VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           N+L+  L++ ++     + AF  ++ ++      N+  Y  ++  +C+  +V EA  +  
Sbjct: 82  NDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYH 139

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           K+   G  L     N+++Y   K G+     ++ + +   G  +P +I++ +L+ G C  
Sbjct: 140 KV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNG-LSPSVITFGTLIDGCCRQ 195

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G +  A     +M  +GI P    + +L+R L S+
Sbjct: 196 GDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSD 230


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 262/550 (47%), Gaps = 5/550 (0%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++MK  G    +  + ++++   + G  E+AL++   +R+ G K  V +   ++    
Sbjct: 249 MLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYC 308

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     ++    +DG+ P    Y +L++   +      AY+L  +M  +G  P   
Sbjct: 309 LRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTF 368

Query: 137 SYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
             + ++  +    + ++A     E+A      V  YN LI+  C+ HK+ EA  L   M 
Sbjct: 369 ELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMK 428

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G+ P++ TY++++   C  G ++ ++ +  +M + G  PN+ ++ +L++GY+      
Sbjct: 429 KAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFD 488

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A  L + M + G   N   Y+ LI+G+C    + E   +          P + TY+++I
Sbjct: 489 NAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSII 548

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           +GF KAG +  A  ++ +M   G  PN++ YT  +   C+      A  ++  +      
Sbjct: 549 NGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQ 608

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ V +N  I G C  G +  A++LL  + +    PN   YN L+ G   +N +KE  + 
Sbjct: 609 PDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKF 668

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + K GI  +  TY T++ G  + G V  A +L  +M+ +G   DA TF  + +  C+
Sbjct: 669 YESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCR 728

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
            G ++ A +LL+ +R   +  P++  Y  L+ G      +QEAF    +MLN GI P+  
Sbjct: 729 SGDIDGAKKLLEEMR-RLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDT 787

Query: 553 TWNVLVRSLF 562
           T+++LV   F
Sbjct: 788 TYDILVSKKF 797



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 257/529 (48%), Gaps = 8/529 (1%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A+ AL +F  +R  G +    +++ ++ A L E        ++  M    ++P+   Y +
Sbjct: 173 AKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYAL 232

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGS 163
            + ALCK      A ++L EM   G      +Y T+V  + K G++EEA  +   MR   
Sbjct: 233 AITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAG 292

Query: 164 ---GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
               V V   L+ G C   ++  A  L  E +  GI P  + Y  +I     VG  + + 
Sbjct: 293 KKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAY 352

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM  +G  P+    + +LKG L   R  +A  L+  M   G LP+V  Y+ LIH  
Sbjct: 353 ELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-LPDVFTYNNLIHWH 411

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C    + EA+++  +M++    P++ TY++L+ G+ K G +  A ++++ M   G  PNV
Sbjct: 412 CQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNV 471

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  +++       F  A++L+++M       N  T+N  I G+C   RV     +L  
Sbjct: 472 VTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKS 531

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
                 +P + TYN +++G ++   +  AF +  ++ + G+  NI+TY + + G CR G 
Sbjct: 532 FMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGC 591

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
              A ++L  +   G + D + +N +I  +C++G +++A+QLL  +   G   P+ + Y 
Sbjct: 592 SDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG-LAPNTVVYN 650

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
           SL+ G  N   M+E   + + M+  GI  + +T+  L+   FS  G++ 
Sbjct: 651 SLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG-FSKDGNVA 698



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 237/483 (49%), Gaps = 6/483 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E+     L ++   +G+  ++ ++  +I    +VG+ ++A ++  ++   GL P+    +
Sbjct: 312 EVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELS 371

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  LL + R+     ++  M   G+ P+VFTYN L+   C+ +++  A  L   M   
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKA 430

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEA 184
           G  P   +Y +++   CK G ++EA     E+ M  F   V  Y  L+ G   +   + A
Sbjct: 431 GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNA 490

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           + LL EM   G+  N  TY+ +I+ +C V  V    G+L      G  P + ++ S++ G
Sbjct: 491 YALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING 550

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           ++  G    A  ++ +M  +G  PN++ Y++ I G C  G  D A+ +   +      P+
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPD 610

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           +  Y+ALI+GF + GN+  A Q+   ++ +G +PN V Y  ++      NM  +     E
Sbjct: 611 IVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYE 670

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M       +T T+ T I G    G V +A++L  +M     +P+  T+  L  GL R  
Sbjct: 671 SMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSG 730

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +  A +L+ E+ +  ++ N+  YN +++G  R   + EAF+L  +ML  G + D  T++
Sbjct: 731 DIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYD 790

Query: 485 III 487
           I++
Sbjct: 791 ILV 793



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 233/516 (45%), Gaps = 40/516 (7%)

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
           S     Y++M   G+ P++ +   LL    + +    A  L +EM  +G   DA  +  +
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198

Query: 142 VSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +S+  K G  E+A  L              VY   I  LCK      A  +L EM + G 
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGF 258

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           D    TY T++  L   G +E +L +  +M   G   ++   T+L++GY L      A +
Sbjct: 259 DTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALN 318

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-------------------- 296
           L+   +++G +P  V Y  LI G    G   +A  +  QM                    
Sbjct: 319 LFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLL 378

Query: 297 ------------EE--NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
                       EE  +S  P+V TY+ LI    +A  L  A  +++RM   G  P++  
Sbjct: 379 NDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+     +A  L  +M  E   PN VT+ T ++G       D A  LLD+MK
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           Q     N  TYN L++G+  V+RV E   ++      G    ++TYN+I++G  +AGM+ 
Sbjct: 499 QNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMG 558

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            AF +  +M  +G   + IT+   I  YC+ G  + A+++L+ +R  G   PDI++Y +L
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG-LQPDIVAYNAL 617

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           + G C  G M  A   L  +L +G+ PN   +N L+
Sbjct: 618 INGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLI 653



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 193/428 (45%), Gaps = 38/428 (8%)

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             MV RG+ P++ + + ++       + + +L +  +M  RG   +   F +L+   L  
Sbjct: 146 AHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKE 205

Query: 249 GRTHEASDLWN-------------------------------RMIRE----GFLPNVVAY 273
           G   +A  L++                               RM+RE    GF      Y
Sbjct: 206 GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
            T++  L   G M+EA+ V+ +M +     +V   + L+ G+     +  A  ++   + 
Sbjct: 266 RTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLK 325

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G  P  V Y  +++   Q  M  +A+ L  +M  +   P+T   +  +KGL    R   
Sbjct: 326 DGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKD 385

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ L ++M     LP++ TYN L+    + ++++EA  L   ++K G++ +I TYN++L 
Sbjct: 386 AVCLFEEMAD-SGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLM 444

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G C+ G + EA +L  +M +EG K + +T+  ++  Y  +   +NA  LLD ++  G   
Sbjct: 445 GYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSC 504

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
            D  +Y  L+ GIC    + E    L+  ++EG  P   T+N ++   F   G +G  + 
Sbjct: 505 ND-YTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING-FVKAGMMGSAFT 562

Query: 574 LDDIMANK 581
           +   M  K
Sbjct: 563 VYQQMREK 570



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 145/319 (45%), Gaps = 6/319 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K + D    LL +MK  GVSC++  +  +IN    V    +   M       G  PT+  
Sbjct: 484 KKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMT 543

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN I++  +          +Y  M+  G+ PN+ TY   +   C+    D A K+L ++ 
Sbjct: 544 YNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLCKEHKIE 182
            +G  PD V+Y  +++  C+ G +  A + L +    G++    VYN+LI G    + ++
Sbjct: 604 RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMK 663

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           E       M+  GI  +  TY+T+I      GNV  +L +  +M  +G  P+  +FT+L 
Sbjct: 664 EVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALT 723

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    G    A  L   M R    PNV  Y+ LI+G   +  + EA  +  +M      
Sbjct: 724 HGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQ 783

Query: 303 PNVTTYSALID-GFAKAGN 320
           P+ TTY  L+   F +A N
Sbjct: 784 PDDTTYDILVSKKFLEADN 802


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 253/506 (50%), Gaps = 18/506 (3%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P ++  N +L AL     F  +  + S M       N+ TY  L+ A C    +  A + 
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCK 177
           L  + + G APD+ +YT+ V   C+ G +  A R   +    G       Y AL++GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
              + EA  +   M      P+   Y+T++  LC+ G  E +  +L +    G  PNI  
Sbjct: 155 AGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +L+ GY   G    A  ++  M      PNV  Y+ LIHGLC +G ++ A+ +  +M 
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PNV TY+ALI G    G+L  A ++ + M +NG  PN   ++ ++  LC+     
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A   +  +  +    N V + + I GLC  G++D A +L+ +M     +P+  +Y+ L+
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL R  ++ +A  ++ ++ + GIQ + VTY  I+  + R        ++  KM+  G  
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 478 LDAITFNIIIYAYCKQGKVNNA----IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            D +T+ + + +YC++G++ +A    +Q++DR    G + P++++Y +L+ G  N G + 
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR----GVF-PNLVTYNTLIRGYANLGLVS 509

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVR 559
           +AF   + M+ +G  PN  ++ VL+R
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLR 535



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 231/477 (48%), Gaps = 36/477 (7%)

Query: 140 TIVSSICKLGQVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           T++ ++ +     +   LA R     +  Y  LIN  C    I  A   L  ++  G+ P
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAP 105

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +   Y++ +   C  G +  +  +   M +RGC     ++T+LL G L  G   EA  ++
Sbjct: 106 DSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVF 165

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +   P+   Y+T++HGLC  G  +EA  +  +   N   PN+  Y+ALIDG+  A
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A +++  M  N CSPNV  YT ++  LC++    +A  L  +M      PN VT+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I+G C  G +  A +LL  M+    +PN  T++ L+D L +  +V+EA   +  + K
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+++N V Y +++ G+C+ G +  A +L+ KM+ EG   DA +++ +I   C+Q K++ 
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 499 AIQLLDRIRGGG----------------------------------EWNPDIISYTSLLW 524
           A  +L+ +   G                                    NPDI++YT  + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             C  G M++A   + +M++ G+ PN  T+N L+R  ++NLG +   +   ++M  K
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG-YANLGLVSQAFSTFEVMVGK 521



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 5/412 (1%)

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L+  L +     +   L   M  R    N+ TY+T+I++ C  G++  +   L  +  
Sbjct: 45  NTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQHLTSLLH 100

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
            G  P+ +++TS + GY   G    A  ++  M   G L     Y+ L+HGL   G + E
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVRE 160

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A++V   M  +SC P+   Y+ ++ G  +AG    A  +    +SNG  PN+V Y  ++ 
Sbjct: 161 AMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALID 220

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
             C       A  + E M    C PN  T+   I GLC  G+V+ AM L  +M +    P
Sbjct: 221 GYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEP 280

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N+ TY  L+ G      ++ AF L+  +E  G+  N  T++ ++  +C+   V EA   L
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
           G ++ +G K++ + +  +I   CK GK++ A +L+ ++   G + PD  SY+SL+ G+C 
Sbjct: 341 GSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEG-FVPDAHSYSSLIDGLCR 399

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
              + +A + L+ M+ +GI  +  T+ +++  L   +G  GP  I D ++A 
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT 451



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 235/496 (47%), Gaps = 17/496 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ ++I+ Y   G  E ALK+F  +      P V+ Y  ++  L    +      ++S M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+EPNV TY  L++  C    +  A++LL  M   G  P+  +++ ++ ++CK  +V
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 152 EEARE-LAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA+  L      GV     VY +LI+GLCK  KI+ A  L+ +M+  G  P+  +YS++
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC    +  +  +L  M  +G   +  ++T ++   +    +     ++++MI  G 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++V Y+  +   C  G M++A S+  QM +    PN+ TY+ LI G+A  G +  A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNM------------FHQAHSLIEKMAFENCPPN 374
            +  M+  G  PN  +YT +++++ + +                   L+E +     P  
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
              ++ FI+ LC   R++ A      M+     P+   Y  ++D   R+  + +A  L+ 
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLD 633

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            + K G   ++ +Y  I+  +C  G    A ++ G +L++ +  D I + I+IY   ++G
Sbjct: 634 SMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKG 693

Query: 495 KVNNAIQLLDRIRGGG 510
            V     LL  ++  G
Sbjct: 694 SVAEFSSLLSVMKEHG 709



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/607 (24%), Positives = 255/607 (42%), Gaps = 53/607 (8%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   +  L  +   G++     + S +  Y R G+   A ++F  +   G   T   Y 
Sbjct: 87  DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYT 146

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  LL          ++  M+ D   P+   Y  ++  LC+  R + A  LL E  + 
Sbjct: 147 ALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSN 206

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y  ++   C  G++E A ++       R    V  Y  LI+GLCK  K+E A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF------ 238
             L   MV+ G++PNV+TY+ +I   C+ G+++ +  +L  M   G  PN  +F      
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 239 -----------------------------TSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                                        TSL+ G    G+   A +L  +MI EGF+P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
             +YS+LI GLC    + +A  +   M E     +  TY+ +ID   +     G  +I++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +MI+ G +P++V YT  V+  C+      A S+I +M      PN VT+NT I+G    G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLD------------GLLRVNRVKEAFELVTEIE 437
            V  A    + M      PN  +Y  LL              + ++  +K+   L+ +I 
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDIT 566

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           +  + L    Y+  +  +CR   + EA      M           +  II   C+   + 
Sbjct: 567 ERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILT 626

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           +A+ LLD +   G + P + SY  ++  +C  G  + A      +L +    +   W +L
Sbjct: 627 DALTLLDSMTKSG-YLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKIL 685

Query: 558 VRSLFSN 564
           +  L   
Sbjct: 686 IYGLLQK 692



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 210/474 (44%), Gaps = 54/474 (11%)

Query: 23  VEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           ++G  CS  V  +  +I+   + G  E+A+ +F R+ E GL+P V  Y  ++     E  
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 +   M+ +G+ PN +T+++L+ ALCK  +V+ A   L  +  KG   + V YT+
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 141 IVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++  +CK G+++ A EL  +     F      Y++LI+GLC++ K+ +A  +L +M+++G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I  + +TY+ II  L      E    I  +M   G NP+I ++T  ++ Y   GR  +A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            +  +M+  G  PN+V Y+TLI G  + G + +A S    M      PN  +Y+ L+   
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLV 537

Query: 316 AKAGNLLGASQIWN---------------------------------------------- 329
            K  +   +  IW                                               
Sbjct: 538 VKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFF 597

Query: 330 -RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M +   +P+   YT ++   C+  +   A +L++ M      P+  ++   I  LC  
Sbjct: 598 MGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEG 657

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           G    A ++   +   E   +   +  L+ GLL+   V E   L++ +++ G Q
Sbjct: 658 GNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQ 711



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 156/366 (42%), Gaps = 53/366 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +ID    L+Q+M  EG       + S+I+   R     QA  M   + E G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ +   Y  I+D L+ E        I+  M   G+ P++ TY + +++ C+  R++ A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLG------------------------------- 149
            ++V+M ++G  P+ V+Y T++     LG                               
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLV 537

Query: 150 -------------QVEEARELAM--------RFGSGVSVYNALINGLCKEHKIEEAFWLL 188
                        ++ + ++L +        +      +Y+  I  LC+  ++EEA    
Sbjct: 538 VKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFF 597

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M +  + P+   Y++II   C +  +  +L +L  M   G  P++ S+  ++     G
Sbjct: 598 MGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEG 657

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G    A +++  ++ +    + + +  LI+GL   GS+ E  S+   M+E+   P+  T 
Sbjct: 658 GNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTI 716

Query: 309 SALIDG 314
           +A+I G
Sbjct: 717 NAMITG 722


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 278/586 (47%), Gaps = 43/586 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M   G S +    +  IN Y + G + +A++ +  ++  G+ P V   N +L +L 
Sbjct: 403 LFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLA 462

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R  M   ++  +K  G+ P+  TY +++K   K ++ D A     +M   GC PD +
Sbjct: 463 GSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVL 522

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +  +++ ++ K G+  EA +L      M+       YN L++GL +E K++E   LL EM
Sbjct: 523 ALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEM 582

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 PN+ITY+T++  L   G V  ++ +L  M  +GC P++ S+ +++ G +   R 
Sbjct: 583 TRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERL 642

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV-SVSYQMEENSCPPNVTTYSA 310
            EA  ++ +M ++   P+     T++     NG M EA+ +V   + +  C  + +++ +
Sbjct: 643 EEAFRMFCQM-KKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHS 701

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L++G  K   +  + +    + S G   N      +++ LC++    +AH L  K     
Sbjct: 702 LMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG 761

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
               T ++N+ I+GL     +D A  L  +MK+  C P+  TYN +LD + +  RV+E  
Sbjct: 762 VSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEML 821

Query: 431 ELVTEIEKCGIQLNIVTYNTI-----------------------------------LHGV 455
           ++  E+ + G +   VTYNTI                                   L G+
Sbjct: 822 KVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGL 881

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            ++G +V+A  L  +ML  G + +   +NI++  +   G   N  QL +++   G  NPD
Sbjct: 882 LKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQG-INPD 940

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I SYT L+  +C +G + +   Y +++   G+ P+   +N+L+  L
Sbjct: 941 IKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 277/555 (49%), Gaps = 8/555 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  M+  G+S +   +  +I    + G   +A++++  + E G+ P+V+ Y+ ++ A   
Sbjct: 159 LPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGK 218

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +     +  + + M+  G++PNV++Y I ++ L +  R D AY +L +M + GC PD V+
Sbjct: 219 KRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVT 278

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
           +T I+  +C  G++ +A+ +  +  +         Y  L++        +    +   MV
Sbjct: 279 HTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMV 338

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + N+++Y+ ++ +LC VG V+ +L +  +M  +G +P  +S+ SL+ G+L      
Sbjct: 339 ADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFD 398

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A +L+N M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 399 RALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVL 458

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
              A +G L  A +++  + + G SP+ + YT M+K   + +   +A +    M    C 
Sbjct: 459 YSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVESGCV 518

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   G+ + A +L  ++K+ +  P   TYN LL GL R  +VKE  +L
Sbjct: 519 PDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQL 578

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + E+ +     N++TYNT+L  + + G V  A  +L  M  +G   D  ++N ++Y   K
Sbjct: 579 LEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIK 638

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK-MLNEGICPNF 551
           + ++  A ++  +++      PD  +  ++L     +G M+EA   +++ +L  G   + 
Sbjct: 639 EERLEEAFRMFCQMK--KILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDK 696

Query: 552 ATWNVLVRSLFSNLG 566
           ++++ L+  +    G
Sbjct: 697 SSFHSLMEGILKKAG 711



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 156/599 (26%), Positives = 267/599 (44%), Gaps = 67/599 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E +     +  +  +   M+ + V  + G F ++       G    A      +RE G
Sbjct: 107 MLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAG 166

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++  L+     +    +Y  M  DG+ P+V TY++L+ A  K   VD   
Sbjct: 167 MSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVL 226

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            LL EM  +G  P+  SYT  +     LGQ       A RF                   
Sbjct: 227 WLLNEMEARGVKPNVYSYTICIRV---LGQ-------AARF------------------- 257

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            +EA+ +L +M D G  P+V+T++ II  LCD G +  +  +  +M      P+  ++ +
Sbjct: 258 -DEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYIT 316

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           LL      G +    ++WN M+ +G+  N+V+Y+ ++  LC  G +DEA++V  +M+E  
Sbjct: 317 LLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKG 376

Query: 301 CPPNVTTYSALIDGFAKA-----------------------------------GNLLGAS 325
             P   +Y++LI GF KA                                   G  L A 
Sbjct: 377 MSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 436

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           Q +  M S G  P+V A   ++  L  +     A  +  ++      P+T+T+   IK  
Sbjct: 437 QRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCC 496

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
               + D AM     M +  C+P++   N L+D L +  +  EA++L  ++++  I+   
Sbjct: 497 SKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTN 556

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TYNT+L G+ R G V E  QLL +M       + IT+N ++    K G+VN AI +L  
Sbjct: 557 GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYS 616

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +   G   PD+ SY ++++G+     ++EAF    +M  + + P++AT   ++ S   N
Sbjct: 617 MTEKG-CAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKN 673



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/567 (23%), Positives = 251/567 (44%), Gaps = 41/567 (7%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I++  + G   +A ++F++++E  ++PT   YN +L  L  E +   +  +   M R 
Sbjct: 526  SLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRT 585

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
               PN+ TYN +L  L KN  V+ A  +L  M  KGCAPD  SY T++  + K  ++EEA
Sbjct: 586  IYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEA 645

Query: 155  --------------------------------------RELAMRFGSGV--SVYNALING 174
                                                  +E  ++ G  V  S +++L+ G
Sbjct: 646  FRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEG 705

Query: 175  LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            + K+  +E++      +  RGI  N      +I  LC       +  +  +    G +  
Sbjct: 706  ILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLK 765

Query: 235  IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
              S+ SL++G +       A DL+  M R G  P+   Y+ ++  +  +  ++E + V  
Sbjct: 766  TGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQK 825

Query: 295  QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            +M          TY+ +I G  K+  L  A  ++  ++S G SP    Y  ++  L ++ 
Sbjct: 826  EMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSG 885

Query: 355  MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
                A +L  +M    C PN   +N  + G    G  +   +L ++M +    P+I +Y 
Sbjct: 886  KMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYT 945

Query: 415  ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
             L+D L    R+ +      ++ + G++ +++ YN ++ G+ ++  + EA  L  +M  +
Sbjct: 946  ILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKK 1005

Query: 475  GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
            G   +  T+N +I    K GK   A Q+ + +   G W P + +Y +L+ G   SG    
Sbjct: 1006 GIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKG-WKPSVFTYNALIRGYSVSGSTDN 1064

Query: 535  AFIYLQKMLNEGICPNFATWNVLVRSL 561
            A+    +M+  G  PN +T+  L   L
Sbjct: 1065 AYAAYGQMIVGGCQPNSSTYMQLPNQL 1091



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 244/524 (46%), Gaps = 42/524 (8%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            ++  LG + ++  V  LL++M       +   + +V++   + G    A+ M Y + E G
Sbjct: 562  LLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKG 621

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P +  YN ++  L+ E R      ++  MK+  + P+  T   +L +  KN  +  A 
Sbjct: 622  CAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEAL 680

Query: 121  KLLVE-MGNKGCAPDAVSYTTIVSSICKLGQVE--------------------------- 152
              + E +   GC  D  S+ +++  I K   VE                           
Sbjct: 681  HTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRH 740

Query: 153  --------EARELAMRF-GSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
                    EA +L  +F G GVS+    YN+LI GL  E+ I+ A  L  EM   G  P+
Sbjct: 741  LCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPD 800

Query: 200  VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
              TY+ I+ ++     VE  L +  +M  +G      ++ +++ G +   R  +A DL+ 
Sbjct: 801  EFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYY 860

Query: 260  RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
             ++ EGF P    Y  L+ GL  +G M +A ++  +M E  C PN T Y+ L++G   AG
Sbjct: 861  NLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAG 920

Query: 320  NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            N     Q++ +M+  G +P++ +YT ++  LC     +       ++      P+ + +N
Sbjct: 921  NTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYN 980

Query: 380  TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
              I GL    R++ A+ L ++MK+   +PN+ TYN L+  L +  +  EA ++  E+ + 
Sbjct: 981  LLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRK 1040

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            G + ++ TYN ++ G   +G    A+   G+M++ G + ++ T+
Sbjct: 1041 GWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTY 1084



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/566 (23%), Positives = 257/566 (45%), Gaps = 8/566 (1%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I  LG+    D   ++L +M+  G          +I      G    A  +F++++    
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP    Y  +LD          +  +++ M  DG   N+ +Y  ++ ALC+  RVD A  
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALA 367

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSVYNAL--INGLC 176
           +  EM  KG +P+  SY +++S   K    + A EL       G   + Y  +  IN   
Sbjct: 368 VFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 427

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  +  +A      M  +GI P+V   + ++ SL   G +  +  +  ++   G +P+  
Sbjct: 428 KSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTI 487

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++T ++K      +  EA + ++ M+  G +P+V+A ++LI  L   G  +EA  + +++
Sbjct: 488 TYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKL 547

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +E    P   TY+ L+ G  + G +    Q+   M      PN++ Y  ++  L +N   
Sbjct: 548 KEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEV 607

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           + A  ++  M  + C P+  ++NT + GL    R++ A ++  QMK+    P+  T   +
Sbjct: 608 NCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTI 666

Query: 417 LDGLLRVNRVKEAFELVTE-IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L   ++   +KEA   V E I K G  ++  ++++++ G+ +   V ++ +    +   G
Sbjct: 667 LPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRG 726

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
             L+      +I   CK  K   A QL ++ +G G  +    SY SL+ G+ +   +  A
Sbjct: 727 ILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLG-VSLKTGSYNSLIRGLVDENLIDIA 785

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
                +M   G  P+  T+N+++ ++
Sbjct: 786 EDLFTEMKRLGCGPDEFTYNLILDAM 811



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 140/599 (23%), Positives = 269/599 (44%), Gaps = 43/599 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K G+  +   V  +   M  +G + +   + +V+++  +VG  ++AL +F  ++E G
Sbjct: 317 LLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKG 376

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN ++   L  + F     ++++M   G  PN +T+ + +    K+ +   A 
Sbjct: 377 MSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 436

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +    M +KG  PD  +   ++ S+   G++  A+ +     AM        Y  +I   
Sbjct: 437 QRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCC 496

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K +EA     +MV+ G  P+V+  +++I +L   G    +  +  ++      P  
Sbjct: 497 SKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTN 556

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL G    G+  E   L   M R  + PN++ Y+T++  L  NG ++ A+ + Y 
Sbjct: 557 GTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYS 616

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E  C P++++Y+ ++ G  K   L  A +++ +M     +P+      ++    +N +
Sbjct: 617 MTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQM-KKILAPDYATLCTILPSFVKNGL 675

Query: 356 FHQA--------------------HSLIE----------KMAF-ENCPPNTVTFNTF--- 381
             +A                    HSL+E           + F EN     +  N F   
Sbjct: 676 MKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLC 735

Query: 382 --IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I+ LC   +   A +L ++ K         +YN L+ GL+  N +  A +L TE+++ 
Sbjct: 736 PLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRL 795

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   +  TYN IL  + ++  V E  ++  +M  +G +   +T+N II    K  ++  A
Sbjct: 796 GCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQA 855

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I L   +   G ++P   +Y  LL G+  SG M +A     +ML  G  PN   +N+L+
Sbjct: 856 IDLYYNLMSEG-FSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILL 913



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 166/359 (46%), Gaps = 9/359 (2%)

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           VG++     ++ +  V+    N+ +F ++  G  + G    A      M   G   N   
Sbjct: 117 VGDMAQVFDLMQKQVVK---TNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYT 173

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ L  +G   EA+ V   M E+   P+V TYS L+  F K  ++     + N M 
Sbjct: 174 YNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEME 233

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           + G  PNV +YT  ++VL Q   F +A+ ++ KM    C P+ VT    I+ LC  GR+ 
Sbjct: 234 ARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLS 293

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  +  +MK  +  P+  TY  LLD        +   E+   +   G   NIV+Y  ++
Sbjct: 294 DAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVV 353

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             +C+ G V EA  +  +M  +G   +  ++N +I  + K    + A++L + +   G  
Sbjct: 354 DALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACG-- 411

Query: 513 NPDIISYTSLLW--GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
            P    YT +L+      SG   +A    + M ++GI P+ A  N ++ SL  + G LG
Sbjct: 412 -PSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGS-GRLG 468



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 142/285 (49%), Gaps = 5/285 (1%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +++ +G+   ++ +  + ++M  +G   +   + ++I+   +    EQA+ ++Y +   G
Sbjct: 807  ILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 866

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              PT   Y  +LD LL   +      +++ M   G EPN   YNILL         +   
Sbjct: 867  FSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVC 926

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVYNALINGL 175
            +L  +M  +G  PD  SYT ++ ++C  G++ +     R+L  +     + VYN LI+GL
Sbjct: 927  QLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             K  +IEEA  L  EM  +GI PN+ TY+++I  L   G    +  +  ++  +G  P++
Sbjct: 987  GKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSV 1046

Query: 236  HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
             ++ +L++GY + G T  A   + +MI  G  PN   Y  L + L
Sbjct: 1047 FTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNSSTYMQLPNQL 1091


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 273/561 (48%), Gaps = 49/561 (8%)

Query: 49  ALKMFYRIREFGLK----PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           A+++F R+  +       PT+  YN ++D     +R  +   I   + ++G+ P+ F+Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GS 163
            L+    K+  VD A+ L +EM  +G  P  +   +I+  +CK+ ++++A  +  +   S
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 164 GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G++     Y+ +I+GLCK   +++A  +L +MV+ G  PN ITY+++I      G    S
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +  QM   G  P + +  S +      GRT+EA  +++ M+ +G  P++++YST++HG
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394

Query: 280 LCSN-------------------------------------GSMDEAVSVSYQMEENSCP 302
             +                                      G MD+A+ +   M+     
Sbjct: 395 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 454

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  T++ +I    + G L  A   +N M+  G  P+   Y C+++  C +    +A  L
Sbjct: 455 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 514

Query: 363 IEKMAFENCPPNTVT-FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           I +M  ++ PP  V  F++ I  LC  GRV     ++D M Q    PN+ T+N L++G  
Sbjct: 515 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 574

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
            V  ++EAF L+  +   GI+ N   Y T++ G C+ G + +A  +   ML +G K  ++
Sbjct: 575 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 634

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            ++II++   +  +   A ++   +   G     I +Y  +L G+C +    EA + L+K
Sbjct: 635 LYSIILHGLFQARRTTAAKKMFHEMIESGT-TVSIHTYGVVLGGLCRNNCTDEANMLLEK 693

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           +    +  +  T+N+++ ++F
Sbjct: 694 LFAMNVKFDIITFNIVISAMF 714



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/546 (27%), Positives = 262/546 (47%), Gaps = 43/546 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM   G   +   + S+I+ Y   G+  +++++F ++   G
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY----------------- 103
           + PTV   N  + AL    R +    I+ +M   G +P++ +Y                 
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 405

Query: 104 --------------------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                               NIL+ A  +   +D A  +  +M NKG  PD V++ T++S
Sbjct: 406 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 465

Query: 144 SICKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S+C++G++++A  +       GV    +VY  LI G C   ++ +A  L+ EM+++ I P
Sbjct: 466 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 525

Query: 199 NVITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
             + Y S+II++LC  G V     I+  M   G  PN+ +F SL++GY L G   EA  L
Sbjct: 526 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 585

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + M   G  PN   Y TL+ G C NG +D+A++V   M      P    YS ++ G  +
Sbjct: 586 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 645

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A     A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +T
Sbjct: 646 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 705

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           FN  I  +   GR   A +L D +  Y  +PNI TY+ ++  L++    +EA  L   +E
Sbjct: 706 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 765

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K G   +    N I+  +     V +A   L  +      L+A T +++   + ++GK  
Sbjct: 766 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 825

Query: 498 NAIQLL 503
             I+LL
Sbjct: 826 EHIKLL 831



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 258/541 (47%), Gaps = 21/541 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+I  + + G  ++A  +F  + E G+ P + I N I+  L           I   M   
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P++FTY++++  LCK+  +D A ++L +M   G  P++++Y +++      G   E+
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII-- 207
             +  +  S      V   N+ I+ L K  +  EA  +   MV +G  P++I+YST++  
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394

Query: 208 ------SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
                 S L DV N      I   M  +G  PN H F  L+  Y   G   +A  ++  M
Sbjct: 395 YATATDSCLADVHN------IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 448

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G +P+ V ++T+I  LC  G +D+A+     M +   PP+   Y  LI G    G L
Sbjct: 449 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 508

Query: 322 LGASQIWNRMISNGCSPNVVAY-TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           + A ++ + M++    P  V Y + ++  LC+     +   +++ M      PN VTFN+
Sbjct: 509 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 568

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            ++G C  G ++ A  LLD M      PN   Y  L+DG  +  R+ +A  +  ++   G
Sbjct: 569 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 628

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++   V Y+ ILHG+ +A     A ++  +M+  GT +   T+ +++   C+    + A 
Sbjct: 629 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 688

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            LL+++        DII++  ++  +   G  QEA      +   G+ PN  T+++++ +
Sbjct: 689 MLLEKLF-AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 747

Query: 561 L 561
           L
Sbjct: 748 L 748



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 170/400 (42%), Gaps = 6/400 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    + + M+ +G+      F +VI+S  R+G  + AL  F  + + G+ P+  +Y  
Sbjct: 438 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 497

Query: 71  ILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           ++              + S M  +D   P V  ++ ++  LCK  RV     ++  M   
Sbjct: 498 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 557

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
           G  P+ V++ +++   C +G +EEA  L     S G+     +Y  L++G CK  +I++A
Sbjct: 558 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 617

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M+ +G+ P  + YS I+  L        +  +  +M   G   +IH++  +L G
Sbjct: 618 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 677

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                 T EA+ L  ++       +++ ++ +I  +   G   EA  +   +      PN
Sbjct: 678 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 737

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TYS +I    K  +   A  ++  +  +G + +      +V++L       +A + + 
Sbjct: 738 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 797

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            +   N      T +         G+    +KLL    Q+
Sbjct: 798 IIGENNLTLEASTISLLASLFSREGKYREHIKLLPAKYQF 837


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/632 (25%), Positives = 303/632 (47%), Gaps = 60/632 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG+   +     LL  +  +G       + S+I ++   G   +A+ +F ++ E G
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230

Query: 61  LKPTVKIYNHILDAL----LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
            KPT+  YN IL+      +  N+  M+  +   MK  G+ P+ +TYN L+    + N  
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNK--MVG-LVDRMKSAGIAPDSYTYNTLISCCRRGNLY 287

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNAL 171
           + A  +L EM   G +PD V+Y  ++    K  + +EA E+     G+G    +  YN+L
Sbjct: 288 EEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSL 347

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I+   ++  +E+A  L  +MV++GI P+V TY+T++S     G  + ++ I  +M   GC
Sbjct: 348 ISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGC 407

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            PNI +F +L+K +   G+  E   ++  +      P++V ++TL+     NG   E   
Sbjct: 408 KPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSG 467

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           V  +M+     P   T++ LI  +++ G+   A  ++ RM+  G +P++ +Y  ++  L 
Sbjct: 468 VFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALA 527

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTF---------IKGLCG--------------- 387
           +  ++ Q+  ++ +M    C PN +T+ +          I+ +C                
Sbjct: 528 RGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAV 587

Query: 388 -----------CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
                      C  +    +   +++Q    P+ITT N ++    R   V +A E++  +
Sbjct: 588 LLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCM 647

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           ++ G   ++ TYN++++   R+     + ++L ++L +G + D I++N +IYAYC+ G++
Sbjct: 648 KRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRM 707

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
            +A ++L  +R  G   PDII+Y + +          EA   +  M+  G  PN +T+N 
Sbjct: 708 RDASRVLSEMRESGP-APDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNS 766

Query: 557 LVR-----------SLF-SNLGHLGPVYILDD 576
           +V            S+F +NL  L P   +D+
Sbjct: 767 IVDWYCKLNRRDEASMFVNNLRKLDPHISMDE 798



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/589 (24%), Positives = 267/589 (45%), Gaps = 48/589 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQ---ALKMFYRIR---EFGLKPTVKIYNH 70
           L +Q   E     E + + V+   + +G  ++   AL++F  +R   E  L     I   
Sbjct: 111 LFEQQPGESDFSVESLSLDVLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAV 170

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           I+  L    R S    +  N+ +DG + +V+ Y  ++ A   N R   A  +  +M   G
Sbjct: 171 IISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVG 230

Query: 131 CAPDAVSYTTIVSSICKLGQV-EEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
           C P  ++Y  I++   K+G    +   L  R  S G++     YN LI+   + +  EEA
Sbjct: 231 CKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEA 290

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +L EM   G  P+ +TY+ ++         + ++ +L +M   GC P+I ++ SL+  
Sbjct: 291 AGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISA 350

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y   G   +A +L N+M+ +G  P+V  Y+TL+ G    G    AV +  +M    C PN
Sbjct: 351 YARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPN 410

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + T++ALI      G      +++  + +  CSP++V +  ++ V  QN M  +   + +
Sbjct: 411 ICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFK 470

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      P   TFNT I     CG  D AM +  +M +    P++++YN +L  L R  
Sbjct: 471 EMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGG 530

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA--------------GMVVEAFQLLGK 470
             K++ +++ E++    + N +TY ++LH                     ++E   +L K
Sbjct: 531 LWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLK 590

Query: 471 MLI---------------------EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            L+                      G   D  T N ++  Y ++  V  A ++LD ++ G
Sbjct: 591 TLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRG 650

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G + P + +Y SL++    S   + +   L+++L +GI P+  ++N ++
Sbjct: 651 G-FTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVI 698



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/444 (20%), Positives = 205/444 (46%), Gaps = 52/444 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM  +G+      + ++++ + + G  + A+++F  +R  G KP +  +N ++    
Sbjct: 363 LKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHG 422

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMGNKGCAP 133
              +F+ +  ++ ++K     P++ T+N LL    +N   + V G +K   EM   G  P
Sbjct: 423 NRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFK---EMKRAGFVP 479

Query: 134 DAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           +  ++ T++SS  + G  ++A     R L       +S YNA++  L +    +++  +L
Sbjct: 480 ERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVL 539

Query: 189 CEMVDRGIDPNVITYSTI-------------------------------------ISSLC 211
            EM D    PN +TY ++                                     ++S C
Sbjct: 540 AEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKC 599

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           D+  +ET    L ++  RG +P+I +  +++  Y       +A+++ + M R GF P++ 
Sbjct: 600 DLL-METERAFL-ELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLT 657

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y++L++    + + + +  +  ++      P++ +Y+ +I  + + G +  AS++ + M
Sbjct: 658 TYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEM 717

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
             +G +P+++ Y   +     ++MF +A  ++  M    C PN  T+N+ +   C   R 
Sbjct: 718 RESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRR 777

Query: 392 DWAMKLLDQMKQYECLPNITTYNE 415
           D A   ++ +++ +  P+I+   E
Sbjct: 778 DEASMFVNNLRKLD--PHISMDEE 799


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 253/509 (49%), Gaps = 12/509 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  ++A+ M   ++  GL P+ +  N +LD  +      +   ++  M + G+ P+  ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELA 158
            +++ A C   RV  A + L  M  +G   D  + T I+ + C+ G V        + + 
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           M     V  + ALINGLCK+  I++AF LL EMV RG  PNV T++T+I  LC  G  E 
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 219 SLGILGQMFVR--GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +  +  ++ VR  G  PN+H++T+++ GY    + + A  L +RM  +G +PN   Y+TL
Sbjct: 348 AFRLFLKL-VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G+   A  +   M +    PN+ TY+A+IDG  K G+L  A ++ N++  +G 
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             + V YT ++ V C+    +++     KM      P+  ++ T I   C   ++  + +
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESER 526

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L ++      +P   TY  ++ G  R      A +L   +   G   + +TY  ++ G+C
Sbjct: 527 LFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLC 586

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +   + +A  L   M+ +G     +T   + Y YCK+   + AI +LDR+    +W   I
Sbjct: 587 KESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE-KRQW---I 642

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
            +  +L+  +C+ G +  A ++  K+L++
Sbjct: 643 RTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/460 (28%), Positives = 217/460 (47%), Gaps = 32/460 (6%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+  G+ P+  T N +L        V+ A  + VEM  +G +PD VS+  +V + C +G+
Sbjct: 180 MQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           V EA                               WL   MV+RG   +  T + II + 
Sbjct: 240 VLEAER-----------------------------WL-NAMVERGFIVDNATCTLIIDAF 269

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G V   +G   +M   G  PN+ +FT+L+ G    G   +A +L   M+R G+ PNV
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNV 329

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
             ++TLI GLC  G  ++A  +  ++   +   PNV TY+A+I+G+ K   L  A  + +
Sbjct: 330 YTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLS 389

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM   G  PN   YT ++   C+   F +A+ L++ M  E   PN  T+N  I GLC  G
Sbjct: 390 RMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG 449

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +D A +LL+++  +    +  TY  L+    R      +     ++ K G   +I +Y 
Sbjct: 450 SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYT 509

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T++   CR   + E+ +L  + +  G      T+  +I  YC+ G  + A++L  R+   
Sbjct: 510 TLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNH 569

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           G   PD I+Y +L+ G+C    + +A      M+++G+ P
Sbjct: 570 G-CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 203/393 (51%), Gaps = 2/393 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           V   ++    +  K++EA  ++ EM ++G+ P+  T + ++     +G VE +  +  +M
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG +P+  SF  ++      GR  EA    N M+  GF+ +    + +I   C  G +
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYV 275

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +  V   ++M E    PNV  ++ALI+G  K G++  A ++   M+  G  PNV  +T +
Sbjct: 276 NRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTL 335

Query: 347 VKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +  LC+     +A  L  K+   +   PN  T+   I G C   +++ A  LL +M++  
Sbjct: 336 IDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +PN  TY  L+DG  +V     A+EL+  + K G   NI TYN I+ G+C+ G + EA+
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +LL K+ + G + D +T+ I++  +C+Q   N ++   +++   G + PDI SYT+L+  
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG-FTPDIHSYTTLIST 514

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            C    M+E+    ++ ++ G+ P   T+  ++
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 211/451 (46%), Gaps = 32/451 (7%)

Query: 112 KNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNAL 171
           +N ++  A  ++VEM N+G  P   +   ++     +G VE A  +              
Sbjct: 166 ENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENM-------------- 211

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
                             EM  RG+ P+ +++  ++ + C++G V  +   L  M  RG 
Sbjct: 212 ----------------FVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGF 255

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
             +  + T ++  +   G  +     + +M+  G  PNV+ ++ LI+GLC  GS+ +A  
Sbjct: 256 IVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFE 315

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYTCMVKVL 350
           +  +M      PNV T++ LIDG  K G    A +++ +++ S+G  PNV  YT M+   
Sbjct: 316 LLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGY 375

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+ +  ++A  L+ +M  +   PNT T+ T I G C  G    A +L+D M +    PNI
Sbjct: 376 CKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNI 435

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN ++DGL +   + EA+ L+ ++   G+Q + VTY  ++   CR      +     K
Sbjct: 436 YTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNK 495

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           ML  G   D  ++  +I  +C+Q ++  + +L +     G   P   +YTS++ G C  G
Sbjct: 496 MLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLG-LIPTKKTYTSMICGYCRYG 554

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               A    Q+M N G  P+  T+  L+  L
Sbjct: 555 NTSLAVKLFQRMSNHGCAPDSITYGALISGL 585



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 187/378 (49%), Gaps = 13/378 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++IN   + G  +QA ++   +   G KP V  +  ++D L  +        ++  + 
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356

Query: 93  R-DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           R DG +PNV TY  ++   CK ++++ A  LL  M  +G  P+  +YTT++   CK+G  
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A EL        F   +  YNA+I+GLCK+  ++EA+ LL ++   G+  + +TY+ +
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +S  C   +   SL    +M   G  P+IHS+T+L+  +    +  E+  L+   +  G 
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGL 536

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P    Y+++I G C  G+   AV +  +M  + C P+  TY ALI G  K   L  A  
Sbjct: 537 IPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARN 596

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +++ M+  G SP  V    +    C+ +    A ++++++          T NT ++ LC
Sbjct: 597 LYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLC 653

Query: 387 GCGRVDWAM----KLLDQ 400
             G++D A     KLLD+
Sbjct: 654 SEGKLDMAALFFHKLLDK 671



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 200/414 (48%), Gaps = 23/414 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+++ + G   + +  F+++ E GL P V  +  +++ L  +        +   M R G
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            +PNV+T+  L+  LCK    + A++L +++  + G  P+  +YT +++  CK  ++  A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L  R          + Y  LI+G CK      A+ L+  M   G  PN+ TY+ II  
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDG 444

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G+++ +  +L ++ V G   +  ++T L+  +     T+ +   +N+M++ GF P+
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPD 504

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           + +Y+TLI   C    M E+  +  +       P   TY+++I G+ + GN   A +++ 
Sbjct: 505 IHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM ++GC+P+ + Y  ++  LC+ +    A +L + M  +   P  VT  T     C   
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 390 RVDWAMKLLDQMKQYECLPNITT-----------------YNELLDGLLRVNRV 426
               A+ +LD++++ + +  + T                 +++LLD    VNRV
Sbjct: 625 DSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRV 678



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 157/333 (47%), Gaps = 10/333 (3%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
             +  L+ ++ +G   +   + ++IN Y +     +A  +  R++E GL P    Y  ++
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           D       F     +   M ++G  PN++TYN ++  LCK   +D AY+LL ++   G  
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 133 PDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
            D V+YT ++S  C+      +     + L + F   +  Y  LI+  C++ +++E+  L
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERL 527

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             E V  G+ P   TY+++I   C  GN   ++ +  +M   GC P+  ++ +L+ G   
Sbjct: 528 FEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK 587

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             +  +A +L++ M+ +G  P  V   TL +  C       A++V  ++E+      + T
Sbjct: 588 ESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRT 644

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
            + L+      G L  A+  +++++     PNV
Sbjct: 645 VNTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 145/300 (48%), Gaps = 3/300 (1%)

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++     NG + EAV++  +M+     P+  T + ++D     G +  A  ++  M   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            SP+ V++  MV   C      +A   +  M       +  T    I   C  G V+  +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
               +M +    PN+  +  L++GL +   +K+AFEL+ E+ + G + N+ T+ T++ G+
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 456 CRAGMVVEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           C+ G   +AF+L  K++  +G K +  T+  +I  YCK+ K+N A  LL R++  G   P
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG-LVP 398

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +  +YT+L+ G C  G    A+  +  M  EG  PN  T+N ++  L    G L   Y L
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKK-GSLDEAYRL 457



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 130/274 (47%), Gaps = 7/274 (2%)

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++  FA+ G L  A  +   M + G  P+     C++ V     +   A ++  +M    
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR---VNRVK 427
             P+ V+F   +   C  GRV  A + L+ M +   + +  T   ++D   +   VNRV 
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
             F  + E+   G+  N++ +  +++G+C+ G + +AF+LL +M+  G K +  T   +I
Sbjct: 280 GYFWKMVEM---GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLI 336

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              CK+G    A +L  ++     + P++ +YT+++ G C    +  A + L +M  +G+
Sbjct: 337 DGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL 396

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            PN  T+  L+      +G+    Y L D+M  +
Sbjct: 397 VPNTNTYTTLIDG-HCKVGNFVRAYELMDLMGKE 429



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 117/270 (43%), Gaps = 35/270 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +K  +D    LL ++ V G+      +  +++ + R     ++L  F ++ + G
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  Y  ++     + +      ++      G+ P   TY  ++   C+      A 
Sbjct: 501 FTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL   M N GCAPD+++Y  ++S +CK  ++++AR L          Y+A          
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL----------YDA---------- 600

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                     M+D+G+ P  +T  T+    C   +  T++ +L ++  R     I +  +
Sbjct: 601 ----------MMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNT 647

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           L++     G+   A+  +++++ +   PNV
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLLDKE--PNV 675


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 237/460 (51%), Gaps = 14/460 (3%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNIL 106
           +A+ +FY+I+    +PT + YN ++  L+ E ++  ++ +Y+ M  +G   P+  TY+ L
Sbjct: 173 KAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSAL 232

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV-------EEARELAM 159
           + A CK  R D A +LL EM + G  P A  YT +++   KL  V       EE R    
Sbjct: 233 ISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYC 292

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R    V  Y  LI GL K  + +EA+    EM   G  P+ +  + +I+ L   G ++ +
Sbjct: 293 R--PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDA 350

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           + +  +M    C P++ ++ +++K  +    R  E S  + RM   G  P+   YS LI 
Sbjct: 351 VKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILID 410

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C     ++A+ +  +M+E   PP    Y +LID   KA     A +++  +  N  S 
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSS 470

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y  M+K L +      A +L ++M    C PN   +N  + GL   G +D A+  +
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTM 530

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M+++ C+P+I +YN +L+GL +      A E+++ +++  I+ + V+YNT+L  +  A
Sbjct: 531 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHA 590

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
           G+  EA +L+ +M + G + D IT++ I+ A    GKV++
Sbjct: 591 GLFEEAAKLMKEMNVLGFEYDLITYSSILEAI---GKVDH 627



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 229/463 (49%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +++ L     +  A  +  ++  + C P A +Y +++  +   GQ E+  EL     +  
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+  CK  + + A  LL EM D G+ P    Y+ +I+    + NV  +
Sbjct: 221 HCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           LG+  +M  + C P++ ++T L++G    GR  EA + ++ M REG  P+ V  + +I+ 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINF 340

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +D+AV +  +M    C P+V TY+ +I    ++ + +     W  RM  +G SP
Sbjct: 341 LGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISP 400

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R D A +L 
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELF 460

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++  L +  R+ +A  L  E+ K G   N+  YN ++ G+ RA
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARA 520

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           GM+ EA   + +M   G   D  ++NII+    K G  + A+++L  ++      PD +S
Sbjct: 521 GMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSA-IKPDAVS 579

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  + ++G  +EA   +++M   G   +  T++ ++ ++
Sbjct: 580 YNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 210/431 (48%), Gaps = 7/431 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L  + + + V  L  +M  EG    + V + ++I+++ ++G  + A+++   +++ 
Sbjct: 196 MIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDN 255

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++PT KIY  ++      N       ++  M+     P+VFTY  L++ L K  R D A
Sbjct: 256 GMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEA 315

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALING 174
           Y    EM  +GC PD V    +++ + K G++++A +L    G+      V  YN +I  
Sbjct: 316 YNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKA 375

Query: 175 LCK-EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           L + + +I E       M   GI P+  TYS +I   C     E ++ +L +M  +G  P
Sbjct: 376 LFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPP 435

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL+       R   A +L+  +       +   Y+ +I  L   G +D+AV++ 
Sbjct: 436 CPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLF 495

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M +  C PNV  Y+AL+ G A+AG L  A     RM  +GC P++ +Y  ++  L + 
Sbjct: 496 DEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKT 555

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              H+A  ++  M      P+ V++NT +  +   G  + A KL+ +M       ++ TY
Sbjct: 556 GGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITY 615

Query: 414 NELLDGLLRVN 424
           + +L+ + +V+
Sbjct: 616 SSILEAIGKVD 626



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 220/479 (45%), Gaps = 11/479 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQ 150
           K+   E +  TY  L++ L    +    +K++ EM  N  C    +  + I+  +     
Sbjct: 111 KKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKM 170

Query: 151 VEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYS 204
           + +A  +  +            YN++I  L  E + E+   L  EM + G   P+ +TYS
Sbjct: 171 ISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYS 230

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +IS+ C +G  ++++ +L +M   G  P    +T L+  +      H A  L+  M  +
Sbjct: 231 ALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQ 290

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
              P+V  Y+ LI GL   G  DEA +  ++M    C P+    + +I+   KAG L  A
Sbjct: 291 YCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDA 350

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQN-NMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
            +++  M +  C P+VV Y  ++K L ++ +   +  S  E+M      P+  T++  I 
Sbjct: 351 VKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILID 410

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQ 442
           G C   R + AM LL++M +    P    Y  L+D L +  R   A EL  E+ E CG  
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSS 470

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
              V Y  ++  + +AG + +A  L  +M   G   +   +N ++    + G ++ A+  
Sbjct: 471 SARV-YAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTT 529

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + R++  G   PDI SY  +L G+  +GG   A   L  M    I P+  ++N ++ ++
Sbjct: 530 MRRMQEHG-CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAM 587



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 110/240 (45%), Gaps = 10/240 (4%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           +   Y  +++ L     + +   +I++M     C    +  +  I+ L     +  A+ +
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILHGVC 456
             Q+K  +C P    YN ++  L+   + ++  EL  E+   G    + VTY+ ++   C
Sbjct: 178 FYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFC 237

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G    A +LL +M   G +  A  + ++I  + K   V+ A+ L + +R      PD+
Sbjct: 238 KLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQ-YCRPDV 296

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +YT L+ G+  +G   EA+ +  +M  EG  P+     V++ ++ + LG  G    LDD
Sbjct: 297 FTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPD----TVVINNMINFLGKAGR---LDD 349



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/270 (19%), Positives = 116/270 (42%), Gaps = 3/270 (1%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           + +TY ALI             ++   M+ N  C    +  + ++++L    M  +A ++
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLL 421
             ++    C P    +N+ I  L   G+ +   +L ++M  +  C P+  TY+ L+    
Sbjct: 178 FYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFC 237

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           ++ R   A  L+ E++  G+Q     Y  ++    +   V  A  L  +M  +  + D  
Sbjct: 238 KLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVF 297

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+  +I    K G+ + A      +R  G   PD +   +++  +  +G + +A    ++
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEMRREG-CRPDTVVINNMINFLGKAGRLDDAVKLFEE 356

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           M      P+  T+N ++++LF +   +  +
Sbjct: 357 MGTLQCIPSVVTYNTIIKALFESKSRISEI 386



 Score = 45.8 bits (107), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 7/172 (4%)

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI-QLNIVTYNTI 451
           WA K     + YE   + +TY  L+  L  V +  E ++++ E+ +  +  +  +  + I
Sbjct: 108 WAAK----KRNYE--HDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDI 161

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           +  +  A M+ +A  +  ++ +   +  A  +N +I     +G+     +L + +   G 
Sbjct: 162 IRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGH 221

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
             PD ++Y++L+   C  G    A   L +M + G+ P    + +L+   F 
Sbjct: 222 CFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFK 273


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 244/516 (47%), Gaps = 7/516 (1%)

Query: 51  KMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP-NVFTYNILLKA 109
           + F  +   G +P    +N  + A +A         +   M RDG  P N F+YN+++  
Sbjct: 146 RAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAG 205

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSG 164
           + +  R   A ++  EM  +   P+ ++Y T++    K G +E    L  +         
Sbjct: 206 MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPN 265

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
              YN L++GLC+  ++ E   LL EM  + + P+  TYS +   L   G+ +  L + G
Sbjct: 266 AITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFG 325

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +    G     ++ + LL G    G+   A ++   ++  G +P  V Y+TLI+G C  G
Sbjct: 326 KSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTG 385

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            ++ A S   QM+     P+  TY+ALI+G  KA  +  A  +   M  NG +P V  + 
Sbjct: 386 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 445

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++    +     +   ++ +M      PN V++ + +   C  G++  A+ +LD M   
Sbjct: 446 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 505

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           + LPN   YN ++D  +      +AF LV +++  GI  +IVTYN ++ G+C    + EA
Sbjct: 506 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            +++  +       DA+++N +I A C +G ++ A+ L  R+   G     + +Y  L+ 
Sbjct: 566 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG-IKSTVRTYHQLIS 624

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           G+  +G + E     QKM+   + P+ A  N++V +
Sbjct: 625 GLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEA 660



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 229/469 (48%), Gaps = 7/469 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P++ + N+LL+AL    R     +    + + G  PD  ++   V +    G + EA  +
Sbjct: 123 PSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGM 182

Query: 158 AMRFGSGVS------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
             R G   +       YN +I G+ +  +  +A  +  EM +R + PN ITY+T+I    
Sbjct: 183 LRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHI 242

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
             G++E    +  QM   G  PN  ++  LL G    GR  E S L + M  +  +P+  
Sbjct: 243 KGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGF 302

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            YS L  GL  NG     +S+  +  +N       T S L++G  K G +  A ++   +
Sbjct: 303 TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSL 362

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           ++ G  P  V Y  ++   CQ      A S   +M   +  P+ +T+N  I GLC   R+
Sbjct: 363 VNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERI 422

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  LL +M+     P + T+N L+D   R  ++++ F +++E+++ G++ N+V+Y +I
Sbjct: 423 TNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSI 482

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           ++  C+ G + EA  +L  M  +    +A  +N II AY + G  + A  L+++++  G 
Sbjct: 483 VNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG- 541

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +P I++Y  L+ G+CN   + EA   +  + N  + P+  ++N L+ +
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 590



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 229/497 (46%), Gaps = 41/497 (8%)

Query: 17  LLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L++M  +G        +  VI    R G    A+++F  + E  + P    YN ++D  
Sbjct: 182 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 241

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +          +   M   G++PN  TYN+LL  LC+  R+     LL EM ++   PD 
Sbjct: 242 IKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 301

Query: 136 VSYTTI-----------------------------------VSSICKLGQVEEARELAMR 160
            +Y+ +                                   ++ +CK G+V  A E+   
Sbjct: 302 FTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361

Query: 161 F-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              +G+     +YN LING C+  ++E AF    +M  R I P+ ITY+ +I+ LC    
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  +  +L +M   G NP + +F +L+  Y   G+  +   + + M   G  PNVV+Y +
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++  C NG + EAV++   M      PN   Y+A+ID + + G    A  +  +M SNG
Sbjct: 482 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            SP++V Y  ++K LC  +   +A  +I  ++     P+ V++NT I   C  G +D A+
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 601

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L  +M +Y     + TY++L+ GL    R+ E   L  ++ +  +  +   +N ++   
Sbjct: 602 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAY 661

Query: 456 CRAGMVVEAFQLLGKML 472
            + G  ++A  L  +ML
Sbjct: 662 SKYGNEIKAEDLRKEML 678



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 178/365 (48%), Gaps = 5/365 (1%)

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP-NVVA 272
            +V  + GIL      G  P+  ++   ++  +  G   EA  +  RM R+G  P N  +
Sbjct: 142 ADVRRAFGILASA---GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ +I G+   G   +AV V  +M E +  PN  TY+ +IDG  K G+L     + ++M+
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G  PN + Y  ++  LC+     +  +L+++MA +   P+  T++    GL   G   
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             + L  +  +        T + LL+GL +  +V  A E++  +   G+    V YNT++
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G C+ G +  AF   G+M     K D IT+N +I   CK  ++ NA  LL  ++  G  
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG-V 437

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
           NP + ++ +L+     +G +++ FI L +M   G+ PN  ++  +V +   N      V 
Sbjct: 438 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 497

Query: 573 ILDDI 577
           ILDD+
Sbjct: 498 ILDDM 502



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 178/392 (45%), Gaps = 5/392 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M  + +      +  + +   R G ++  L +F +  + G+       + +L+ L 
Sbjct: 288 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLC 347

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + + S+   +  ++   G+ P    YN L+   C+   ++GA+    +M ++   PD +
Sbjct: 348 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 407

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +CK  ++  A++L M          V  +N LI+   +  ++E+ F +L EM
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G+ PNV++Y +I+++ C  G +  ++ IL  MF +   PN   + +++  Y+  G  
Sbjct: 468 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 527

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L  +M   G  P++V Y+ LI GLC+   + EA  +   +  +   P+  +Y+ L
Sbjct: 528 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 587

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I      GN+  A  +  RM   G    V  Y  ++  L       +   L +KM   N 
Sbjct: 588 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNV 647

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            P+    N  ++     G    A  L  +M Q
Sbjct: 648 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 146/292 (50%), Gaps = 5/292 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++G      QMK   +      + ++IN   +      A  +   +++ G+ PTV+ +N
Sbjct: 386 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 445

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA     +      + S M+ +G++PNV +Y  ++ A CKN ++  A  +L +M +K
Sbjct: 446 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 505

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
              P+A  Y  I+ +  + G  ++A  L  +  S G+S     YN LI GLC + +I EA
Sbjct: 506 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             ++  + +  + P+ ++Y+T+IS+ C  GN++ +L +  +M   G    + ++  L+ G
Sbjct: 566 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 625

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
               GR  E   L+ +M++   +P+   ++ ++      G+  +A  +  +M
Sbjct: 626 LGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 162/399 (40%), Gaps = 76/399 (19%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG-------------- 279
           ++H   SLL      GR H + DL   ++     P       L H               
Sbjct: 23  HLHELASLLAA----GRFHASVDLAKSLLLTAQPPAASVVPDLYHALAAAASASASASPG 78

Query: 280 --------LCSNGSM-----------DEAVS-VSYQMEENSCP-PNVTTYSALIDGFAKA 318
                   LC   S            D A+  +S   +E   P P++++ + L++     
Sbjct: 79  DPHPASSFLCDAASALVVASARLRLPDGALRLLSDLADEARAPLPSLSSCNLLLEALLSL 138

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC-PPNTVT 377
           G      + +  + S G  P+  A+   V+         +A  ++ +M  +   PPN  +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  I G+   GR   A+++ D+M +   LPN  TYN ++DG ++   ++  F L  ++ 
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 438 KCGIQLNIVTYNTILHGVCRAG----------------MVVEAF---------------- 465
             G++ N +TYN +L G+CRAG                MV + F                
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 466 ---QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
               L GK L  G  +   T +I++   CK GKV+ A ++L  +   G   P  + Y +L
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG-LVPTRVIYNTL 377

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + G C +G ++ AF    +M +  I P+  T+N L+  L
Sbjct: 378 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGL 416



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 5/269 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   I   Q LL +M+  GV+ +   F ++I++Y R G  E+   +   ++E G
Sbjct: 412 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 471

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y  I++A     +      I  +M    + PN   YN ++ A  ++   D A+
Sbjct: 472 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 531

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
            L+ +M + G +P  V+Y  ++  +C   Q+ EA E+       R       YN LI+  
Sbjct: 532 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 591

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I++A  L   M   GI   V TY  +IS L   G +     +  +M      P+ 
Sbjct: 592 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSN 651

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
                +++ Y   G   +A DL   M+++
Sbjct: 652 AIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 164/587 (27%), Positives = 266/587 (45%), Gaps = 44/587 (7%)

Query: 1   MIEKLGEKCEI-DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I  L E+ ++ D + +L    KV G S       ++++ + +VGL + A   F  + + 
Sbjct: 243 LIHGLCEQSKLEDAISFLHDSNKVVGPSIVS--INTIMSKFCKVGLIDVARSFFCLMVKN 300

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           GL      YN +L  L              +M++ G+EP+V TYN L K       + GA
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALING 174
            K++ +M  +G  PD V+YTT++   C++G +EEA +L        F   V  YN L++ 
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +IEEA  L  EM    ++P+ I YS +I  LC  G V+ +  +  QM ++   P+
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 235 IHSFTSLLKGYLLGGRTHEAS---DLWNR------------------------------- 260
             +  ++L G    G   EA    D W R                               
Sbjct: 481 HFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYY 540

Query: 261 -MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            MI  G  P+VV ++TLI+G C  G + EA  +   +      P+V TY+ L++ + + G
Sbjct: 541 KMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVG 600

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           N+       + M +N   P  V YT ++K LC+ N  H++  L+E M  +   P++VT+N
Sbjct: 601 NMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYN 660

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T I+  C    +  A++L + M  + C P   TY  L++ L     +K+   +V  IE  
Sbjct: 661 TIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDR 720

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
            I L  VTY TI+   C  G V +A     +ML +G  +    ++ +I   CK+G +  A
Sbjct: 721 NITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA 780

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
                 +   G   PD     ++L      G     F +L  ++  G
Sbjct: 781 KYFFVMMLSEG-VTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 262/528 (49%), Gaps = 10/528 (1%)

Query: 39  SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEP 98
           +Y R  +   AL +  ++++   + +V  YN +L  +       ++  +Y+ +K  G   
Sbjct: 179 AYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM---RHTDIMWDVYNEIKVSGAPQ 235

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-- 156
           +  T +IL+  LC+ ++++ A   L +  NK   P  VS  TI+S  CK+G ++ AR   
Sbjct: 236 SECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFF 294

Query: 157 -LAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            L ++ G       YN L++GLC    ++EA     +M   G++P+V+TY+T+      +
Sbjct: 295 CLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLL 354

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +  ++ +M ++G NP++ ++T+L+ G+   G   EA  L    +  GF  NV+ Y
Sbjct: 355 GLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFY 414

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + L+  LC  G ++EA+++  +ME     P+   YS LI G  K G +  A Q++ +M  
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               P+  A   ++  L +N    +A +  +     +   + V +N  I G      +  
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM+L  +M +    P++ T+N L++G  R   + EA +++  I   G+  ++VTY T+++
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             C  G + E F  L +M         +T+ ++I   C+Q K++ ++QLL+ +   G   
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL- 653

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           PD ++Y +++   C    + +A      ML     P   T+ VL+ +L
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINAL 701



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/555 (24%), Positives = 254/555 (45%), Gaps = 22/555 (3%)

Query: 27  SCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           + SE V   V++  R +         ++ I E+G + ++     +   L  + RF  ++ 
Sbjct: 79  TLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDS 138

Query: 87  IYSNMKRD------------------GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           +  N+  D                    + N   +++L  A  ++  +  A  ++ +M +
Sbjct: 139 VIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKD 198

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--VYNALINGLCKEHKIEEAFW 186
                   +Y +++ ++     + +        G+  S    + LI+GLC++ K+E+A  
Sbjct: 199 LNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAIS 258

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L +  ++ + P++++ +TI+S  C VG ++ +      M   G   +  S+  LL G  
Sbjct: 259 FLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLC 317

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           + G   EA    + M + G  P+VV Y+TL  G    G M  A  V  +M      P++ 
Sbjct: 318 VAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLV 377

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+ LI G  + GN+  A ++    +S G   NV+ Y  ++  LC+     +A +L ++M
Sbjct: 378 TYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEM 437

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 P+ + ++  I GLC  G V  A +L +QM+     P+      +L GL +   +
Sbjct: 438 ETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNI 497

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            EA        +  +  ++V YN ++ G  R   + EA QL  KM+  G     +TFN +
Sbjct: 498 SEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTL 557

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I  +C++G +  A ++L+ IR  G   P +++YT+L+   C  G MQE F +L +M    
Sbjct: 558 INGFCRRGDLMEARKMLEVIRLKG-LVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 547 ICPNFATWNVLVRSL 561
           + P   T+ VL++ L
Sbjct: 617 VVPTHVTYTVLIKGL 631



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 154/315 (48%), Gaps = 9/315 (2%)

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           H+A  +  +M    F  +V  Y++L+H +     M +   V  +++ +  P +  T S L
Sbjct: 187 HDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWD---VYNEIKVSGAPQSECTTSIL 243

Query: 312 IDGFAKAGNLLGASQIWNRMISNGC-SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           I G  +   L  A    +   SN    P++V+   ++   C+  +   A S    M    
Sbjct: 244 IHGLCEQSKLEDAISFLHD--SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNG 301

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              ++ ++N  + GLC  G +D A+   D M+++   P++ TYN L  G L +  +  A 
Sbjct: 302 LLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGAR 361

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ++V ++   G+  ++VTY T++ G C+ G + EA +L  + L  G KL+ I +N+++   
Sbjct: 362 KVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCL 421

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF-IYLQKMLNEGICP 549
           CK G++  A+ L D +       PD I Y+ L+ G+C  G +Q A+ +Y Q  L      
Sbjct: 422 CKVGRIEEALTLFDEMETL-RLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH 480

Query: 550 NFATWNVLVRSLFSN 564
           +FA   VL+  LF N
Sbjct: 481 HFAQRAVLL-GLFKN 494



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 43/303 (14%)

Query: 10  EIDGVQYLLQ---QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
            +DG+   +Q   +M   G++ S   F ++IN + R G   +A KM   IR  GL P+V 
Sbjct: 528 RLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVV 587

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  +++A         +      M+ + + P   TY +L+K LC+ N++  + +LL  M
Sbjct: 588 TYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYM 647

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLC----- 176
             KG  PD+V+Y TI+   CK  ++ +A +L               Y  LIN LC     
Sbjct: 648 YAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDL 707

Query: 177 --------------------------KEH----KIEEAFWLLCEMVDRGIDPNVITYSTI 206
                                     K H    ++ +A     +M+ +G   ++  YS +
Sbjct: 708 KDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAV 767

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+ LC  G +  +      M   G  P+     ++L  +   G      +    +++ GF
Sbjct: 768 INRLCKRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGF 827

Query: 267 LPN 269
           + +
Sbjct: 828 ISH 830


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 248/504 (49%), Gaps = 10/504 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   +D +   +Q M     S     +  ++    +  +  +AL +FY+I+   
Sbjct: 130 LIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRK 189

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG-MEPNVFTYNILLKALCKNNRVDGA 119
             PT  +YN ++  L+ E     I+ +Y+ +  +G   P+  TY+ L+ A  K  R D A
Sbjct: 190 CNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFA 249

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALING 174
           ++L  EM   G  P    YTTI++   KL +VE A  L     G G    V  Y  LI G
Sbjct: 250 FRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKG 309

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K  ++++A+ L   M+  G  P+V+  + +I+ L   G +E +L + G+M    C PN
Sbjct: 310 LGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPN 369

Query: 235 IHSFTSLLKGYLLGGRTHEASDLW-NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           + ++ +++K           + LW  +M   G  P+   Y+ LI G C    +++A+ + 
Sbjct: 370 VVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLL 429

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+E   PP    Y +LID   +A     A++++  +  N    +   Y  M+K     
Sbjct: 430 EEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNC 489

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  L  +M    C P+  T+N  + G+   G +D A  L+  M++  C P+I ++
Sbjct: 490 GRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSH 549

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N +L+GL +    K A E+ T++++  I  + V+YNTIL  + RAGM   A +L+ +M +
Sbjct: 550 NIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKL 609

Query: 474 EGTKLDAITFNIIIYAYCKQGKVN 497
           +G + D+IT++ I+ A    GKV+
Sbjct: 610 KGFEYDSITYSSILEAV---GKVD 630



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 230/463 (49%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +LK L K   V+ A  +  ++  + C P A  Y T++  +   G  E+  EL     S  
Sbjct: 165 ILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG 224

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+   K  + + AF L  EM + G+ P    Y+TI++    +  VE +
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L ++ +M  +GC P + ++T L+KG    GR  +A  L+  M+++G  P+VV  + LI+ 
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +++A+ +  +M+   C PNV TY+ +I    ++      + +W  +M +NG +P
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y  ++   C+ N   +A  L+E+M  +  PP    + + I  L    R + A +L 
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++       R+ +A +L  E++K G   ++ TYN ++ G+ RA
Sbjct: 465 QELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRA 524

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           GM+ EA  L+  M   G   D  + NII+    K G    AI++  +++   E  PD +S
Sbjct: 525 GMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES-EIMPDAVS 583

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  +  +G  + A   +++M  +G   +  T++ ++ ++
Sbjct: 584 YNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/478 (27%), Positives = 223/478 (46%), Gaps = 10/478 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           KR   + +  TY  L++ L ++  VD  ++ + +M    C+     ++ I+  + K   V
Sbjct: 116 KRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMV 175

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYST 205
            +A  +       +     +VYN LI  L  E   E+   L  E+   G   P+ ITYS 
Sbjct: 176 NKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSA 235

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS+   +   + +  +  +M   G +P    +T++L  Y    +   A  L   M  +G
Sbjct: 236 LISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKG 295

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P V  Y+ LI GL   G +D+A S+ + M ++ C P+V   + LI+   +AG L  A 
Sbjct: 296 CAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDAL 355

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL-IEKMAFENCPPNTVTFNTFIKG 384
           +++ +M S  C+PNVV Y  ++K + ++       +L  EKM      P++ T+   I G
Sbjct: 356 KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDG 415

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQL 443
            C   RV+ A+ LL++M +    P    Y  L+D L R  R + A EL  E+ E CG + 
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCG-RS 474

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   Y  ++      G + +A  L  +M   G   D  T+N ++    + G ++ A  L+
Sbjct: 475 SARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLM 534

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +R  G   PDI S+  +L G+  +GG + A     KM    I P+  ++N ++  L
Sbjct: 535 RNMRENG-CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCL 591



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 37/303 (12%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R+ F  +   Y  LI  L  +G +DE       M  + C      +S ++    KA  + 
Sbjct: 117 RQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVN 176

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTF 381
            A  ++ ++    C+P    Y  ++ +L       + H L  ++  E NC P+T+T++  
Sbjct: 177 KALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSAL 236

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I       R D+A +L D+MK+    P    Y  +L    ++N+V+ A  LV E++  G 
Sbjct: 237 ISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGC 296

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
              + TY  ++ G+ + G V +A+ L   ML +G K D +              +NN I 
Sbjct: 297 APTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVL-------------INNLIN 343

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L R                       +G +++A     KM +    PN  T+N +++++
Sbjct: 344 ILGR-----------------------AGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAI 380

Query: 562 FSN 564
           F +
Sbjct: 381 FES 383



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 3/153 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+  G    +     L  +MK  G S     + ++++   R G+ ++A  +   +RE G
Sbjct: 482 MIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENG 541

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +K +N IL+ L           +++ MK   + P+  +YN +L  L +    + A 
Sbjct: 542 CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAA 601

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           KL+ EM  KG   D+++Y++I+ ++   G+V+E
Sbjct: 602 KLMREMKLKGFEYDSITYSSILEAV---GKVDE 631


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 250/524 (47%), Gaps = 3/524 (0%)

Query: 33  FISVINSYRRVGLAEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           F S++  + R  L    L++F  + R     PT   YN ++ AL             S M
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            R G  P+ FT+N L+   C+  +++ A+ L  +M  +G + DAVSY  ++   C+ G++
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 152 EEARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           +EA EL        +  + AL+ GLC   + EE   +L +M + G  P    Y+ ++   
Sbjct: 216 DEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLW 275

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C     E +  IL +MF  G  P + + T ++  Y   GR   A  ++  M  +G  PNV
Sbjct: 276 CREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNV 335

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+ ++ G C+ G + +A+++  QM E    P+V TY+ LI G    G++  A ++   
Sbjct: 336 WTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRL 395

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M  NG + +   Y  ++  LC+     +A SL + + +    PN+VTFNT I GLC  G+
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGK 455

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            D A   L+ M      P+  TY+  ++ L +    +E    + E+ +  ++ + V Y  
Sbjct: 456 FDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTI 515

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++ +        A ++ G+M+ +G   D +T+   + AYC +G+++ A  ++  ++   
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
               D ++Y +L+ G  + G    A   L+ M      PN  T+
Sbjct: 576 TIV-DAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 204/399 (51%), Gaps = 5/399 (1%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
           + YNALI  LC+   +  A   L  MV  G  P+  T++++I   C    +E +  +  +
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCK 189

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  RG + +  S+ +L++G+   GR  EA +L+  M +    P++  ++ L+ GLC  G 
Sbjct: 190 MPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGR 245

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
            +E + +  +M+E    P    Y+AL+D + +      A +I N M  +G  P VV  T 
Sbjct: 246 GEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTI 305

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V   C+      A  + E M F+ C PN  T+N  ++G C  G+V  AM LLDQM++  
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P++ TYN L+ G      +  AF L+  +E  G+  +  TYN ++  +C+ G V EA 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
            L   +   G + +++TFN +I   CK GK + A   L+ +   G + PD  +Y+  +  
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG-YAPDTYTYSPFIEN 484

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +C + G QE   ++ +ML + + P+   + +++  LF+ 
Sbjct: 485 LCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNE 523



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 228/503 (45%), Gaps = 38/503 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N+Y R G    A+++F  +R  G +P V  YN I+       +      +   M+  G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +EP+V TYN+L++  C +  +  A++LL  M   G A D  +Y  ++ ++CK G+V+EA 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 156 EL-------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
            L        +R  S    +N +INGLCK  K + A   L  M+  G  P+  TYS  I 
Sbjct: 426 SLFDGLEYRGIRPNS--VTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIE 483

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           +LC     +  L  + +M  +   P+  ++T ++           A+ +W +M+ +G  P
Sbjct: 484 NLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +VV Y+T +   C+ G +DEA +V  +M++     +   Y+ LIDG    G    A  I 
Sbjct: 544 DVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTIL 603

Query: 329 NRMISNGCSPNVVAY--------------------TCMVKVLCQNNMFHQAHSLIEKMAF 368
             M      PN   +                    T + K +   ++F     L E M  
Sbjct: 604 KHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFE----LFELMKK 659

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP-NITTYNELLDGLLRVNRVK 427
            + P +  T+ + ++G     R+D    L+  MK+ E LP N   YN L++   ++    
Sbjct: 660 NSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKE-ENLPLNEDIYNALVNCFCKLRMYS 718

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A+ L+  +   G   N++ Y  +L G+   G    A ++      +    D I + +II
Sbjct: 719 DAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVII 778

Query: 488 YAYCKQGKVN---NAIQLLDRIR 507
             + ++G  +   + I +L++++
Sbjct: 779 DGFIRKGHADMCHDMISMLEQMK 801



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/495 (21%), Positives = 218/495 (44%), Gaps = 56/495 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            + G   + + M+ +G   +   + +++  +   G   +A+ +  ++RE G++P V  YN
Sbjct: 315 RMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYN 374

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     +        +   M+ +G+  + +TYN+L+ ALCK  +VD A  L   +  +
Sbjct: 375 LLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P++V++ T+++ +CK G+ + A       ++  +      Y+  I  LCK    +E 
Sbjct: 435 GIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEG 494

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
            + + EM+ + + P+ + Y+ +I+ L +  N   +  I GQM  +GC+P++ ++T+ ++ 
Sbjct: 495 LFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRA 554

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD----------------- 287
           Y   GR  EA ++   M +   + + +AY+TLI G  S G  D                 
Sbjct: 555 YCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPN 614

Query: 288 ----------------------EAVSVSYQ------------MEENSCPPNVTTYSALID 313
                                 +A SV               M++NS P +  TY ++++
Sbjct: 615 HFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILE 674

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           GF++   L   + + + M       N   Y  +V   C+  M+  A +L+  M      P
Sbjct: 675 GFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLP 734

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N + +   + GL   G+ D A ++    +  E   +   +  ++DG +R        +++
Sbjct: 735 NLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMI 794

Query: 434 TEIEKCGIQLNIVTY 448
           + +E+   + +  TY
Sbjct: 795 SMLEQMKCKPSDETY 809


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 246/478 (51%), Gaps = 11/478 (2%)

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           P+   +++ G+ P+  + N +L  L     +D A +L  E+  K    +  SY  ++ ++
Sbjct: 212 PLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKAL 263

Query: 146 CKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           C  G++++A +L   M     V  Y  +++G C   ++E A  LL EM  RG++ N + Y
Sbjct: 264 CTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAY 323

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +++I+ LCD G V  ++ ++  M + G   +   FT+++ G+   G    A + ++ M +
Sbjct: 324 TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK 383

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G   + V Y+ LI+GLC  G + EA  V  +ME+     +  TY+ LIDG+ K G +  
Sbjct: 384 RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  + N+M+    +PNVV YT +   LC+      A+ L+ +M  +    N  T+N+ I 
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G ++ AM+ +  M +    P++ TY  ++  L +   +  A  L+ E+   GI+ 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            IVTYN +++G C +G V    +LL  ML +    +  T+N ++  YC +  + +  ++ 
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +    E  P+  +Y  L+ G C +  M+EA  +  +M+ +G     +++N L+R L
Sbjct: 624 KGML-SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 253/483 (52%), Gaps = 21/483 (4%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+++F  + E   K T   YN +L AL    R    + ++  M      P+V TY I+
Sbjct: 239 DEAVQLFQELPE---KNTCS-YNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIM 291

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGV 165
           +   C  + ++ A KLL EM  +G   + V+YT++++ +C  GQV +A R +      GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 166 ----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
               +V+  +++G C++  +  A     EM  RG+  + +TY+ +I+ LC  G ++ +  
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M  +G + +  ++T L+ GY   G+  EA  + N+M+++   PNVV Y+ L  GLC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +  A  + ++M       N+ TY++LI+G  KAGNL  A +    M   G  P+V 
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVY 531

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++  LCQ+    +AHSL+++M  +   P  VT+N  + G C  GRV+   +LL+ M
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM 591

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV----TYNTILHGVCR 457
            +    PN TTYN L+        +++  +  TEI K  +   +V    TYN ++ G C+
Sbjct: 592 LEKNIHPNTTTYNSLMKQYC----IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-EWNPDI 516
           A  + EA     +M+ +G +L A ++N +I    K+ K   A +L +++R       PD+
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 517 ISY 519
            ++
Sbjct: 708 YNF 710



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 236/505 (46%), Gaps = 14/505 (2%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +  +D    L Q++  E  +CS  + +  + +  R+  A Q         E    P V  
Sbjct: 235 RLPLDEAVQLFQELP-EKNTCSYNILLKALCTAGRIKDAHQLFD------EMASPPDVVT 287

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++      +       + S M   G+E N   Y  ++  LC   +V  A +++ +M 
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR--FGSGVSVYNALINGLCKEHKI 181
             G   DA  +TT++S  C+ G +  AR    E+  R     GV+ Y ALINGLC+  ++
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT-YTALINGLCRAGEL 406

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +EA  +L EM D+G+D + +TY+ +I   C VG +  +  +  +M  +   PN+ ++T+L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
             G    G    A++L + M  +G   N+  Y++LI+GLC  G++++A+     M+E   
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+V TY+ +I    ++  L  A  +   M+  G  P +V Y  ++   C +        
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+E M  +N  PNT T+N+ +K  C    +    ++   M   E +PN  TYN L+ G  
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC 646

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +KEA    +E+ + G +L   +YN ++  + +     EA +L  KM  E    +  
Sbjct: 647 KARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRI 506
            +N  I     +  + + + L D +
Sbjct: 707 VYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 192/420 (45%), Gaps = 5/420 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ ++     +++ M + GV     VF +V++ + R G    A   F  +++ G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      Y  +++ L           +   M+  G++ +  TY +L+   CK  ++  A+
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +  +M  K   P+ V+YT +   +CK G V  A EL     S      +  YN+LINGL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +E+A   + +M + G+ P+V TY+TII +LC    ++ +  +L +M  +G  P I
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ G+ + GR      L   M+ +   PN   Y++L+   C   +M     +   
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ LI G  KA N+  A    + MI  G      +Y  ++++L +   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A  L EKM  E        +N +I        ++  + L D++ +   + +I   ++
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDD 745



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+  + + GI  +  + N +L   CR  +  EA QL  ++  + T     ++NI++ A C
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLPLD-EAVQLFQELPEKNT----CSYNILLKALC 264

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             G++ +A QL D +       PD+++Y  ++ G C    ++ A   L +M   G+  N 
Sbjct: 265 TAGRIKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 552 ATWNVLVRSLFSNLGHLG-PVYILDDIM 578
             +  ++ +L  + G +   V +++D++
Sbjct: 321 VAYTSVI-ALLCDEGQVSDAVRVVEDMV 347


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 246/478 (51%), Gaps = 11/478 (2%)

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           P+   +++ G+ P+  + N +L  L     +D A +L  E+  K    +  SY  ++ ++
Sbjct: 212 PLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKAL 263

Query: 146 CKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           C  G++++A +L   M     V  Y  +++G C   ++E A  LL EM  RG++ N + Y
Sbjct: 264 CTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAY 323

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +++I+ LCD G V  ++ ++  M + G   +   FT+++ G+   G    A + ++ M +
Sbjct: 324 TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK 383

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G   + V Y+ LI+GLC  G + EA  V  +ME+     +  TY+ LIDG+ K G +  
Sbjct: 384 RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  + N+M+    +PNVV YT +   LC+      A+ L+ +M  +    N  T+N+ I 
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G ++ AM+ +  M +    P++ TY  ++  L +   +  A  L+ E+   GI+ 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            IVTYN +++G C +G V    +LL  ML +    +  T+N ++  YC +  + +  ++ 
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +    E  P+  +Y  L+ G C +  M+EA  +  +M+ +G     +++N L+R L
Sbjct: 624 KGML-SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 253/483 (52%), Gaps = 21/483 (4%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+++F  + E   K T   YN +L AL    R    + ++  M      P+V TY I+
Sbjct: 239 DEAVQLFQELPE---KNTCS-YNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIM 291

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGV 165
           +   C  + ++ A KLL EM  +G   + V+YT++++ +C  GQV +A R +      GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 166 ----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
               +V+  +++G C++  +  A     EM  RG+  + +TY+ +I+ LC  G ++ +  
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M  +G + +  ++T L+ GY   G+  EA  + N+M+++   PNVV Y+ L  GLC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +  A  + ++M       N+ TY++LI+G  KAGNL  A +    M   G  P+V 
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVY 531

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++  LCQ+    +AHSL+++M  +   P  VT+N  + G C  GRV+   +LL+ M
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM 591

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV----TYNTILHGVCR 457
            +    PN TTYN L+        +++  +  TEI K  +   +V    TYN ++ G C+
Sbjct: 592 LEKNIHPNTTTYNSLMKQYC----IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-EWNPDI 516
           A  + EA     +M+ +G +L A ++N +I    K+ K   A +L +++R       PD+
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDV 707

Query: 517 ISY 519
            ++
Sbjct: 708 YNF 710



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 132/505 (26%), Positives = 236/505 (46%), Gaps = 14/505 (2%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +  +D    L Q++  E  +CS  + +  + +  R+  A Q         E    P V  
Sbjct: 235 RLPLDEAVQLFQELP-EKNTCSYNILLKALCTAGRIKDAHQLFD------EMASPPDVVT 287

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++      +       + S M   G+E N   Y  ++  LC   +V  A +++ +M 
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR--FGSGVSVYNALINGLCKEHKI 181
             G   DA  +TT++S  C+ G +  AR    E+  R     GV+ Y ALINGLC+  ++
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT-YTALINGLCRAGEL 406

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +EA  +L EM D+G+D + +TY+ +I   C VG +  +  +  +M  +   PN+ ++T+L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
             G    G    A++L + M  +G   N+  Y++LI+GLC  G++++A+     M+E   
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+V TY+ +I    ++  L  A  +   M+  G  P +V Y  ++   C +        
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+E M  +N  PNT T+N+ +K  C    +    ++   M   E +PN  TYN L+ G  
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC 646

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +KEA    +E+ + G +L   +YN ++  + +     EA +L  KM  +    +  
Sbjct: 647 KARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPD 706

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRI 506
            +N  I     +  + + + L D +
Sbjct: 707 VYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 179/387 (46%), Gaps = 5/387 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ ++     +++ M + GV     VF +V++ + R G    A   F  +++ G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      Y  +++ L           +   M+  G++ +  TY +L+   CK  ++  A+
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +  +M  K   P+ V+YT +   +CK G V  A EL     S      +  YN+LINGL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +E+A   + +M + G+ P+V TY+TII +LC    ++ +  +L +M  +G  P I
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ G+ + GR      L   M+ +   PN   Y++L+   C   +M     +   
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ LI G  KA N+  A    + MI  G      +Y  ++++L +   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFI 382
           F +A  L EKM  +        +N +I
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYI 712



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+  + + GI  +  + N +L   CR  +  EA QL  ++  + T     ++NI++ A C
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLPLD-EAVQLFQELPEKNT----CSYNILLKALC 264

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             G++ +A QL D +       PD+++Y  ++ G C    ++ A   L +M   G+  N 
Sbjct: 265 TAGRIKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 552 ATWNVLVRSLFSNLGHLG-PVYILDDIM 578
             +  ++ +L  + G +   V +++D++
Sbjct: 321 VAYTSVI-ALLCDEGQVSDAVRVVEDMV 347


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 253/506 (50%), Gaps = 18/506 (3%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P ++  N +L AL     F  +  + S M       N+ TY  L+ A C    +  A + 
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPAR----NLRTYTTLINAYCLAGDIPAAKQH 94

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCK 177
           L  + + G APD+ +YT+ V   C+ G +  A R   +    G       Y AL++GL  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
              + EA  +   M      P+   Y+T++  LC+ G  E +  +L +    G  PNI  
Sbjct: 155 AGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVV 214

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +L+ GY   G    A  ++  M      PNV  Y+ LIHGLC +G ++ A+ +  +M 
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E    PNV TY+ALI G    G+L  A ++ + M +NG  PN   ++ ++  LC+     
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A   +  +  +    N V + + I GLC  G++D A +L+ +M     +P+  +Y+ L+
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL R  ++ +A  ++ ++ + GIQ + VTY  I+  + R        ++  KM+  G  
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454

Query: 478 LDAITFNIIIYAYCKQGKVNNA----IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            D +T+ + + +YC++G++ +A    +Q++DR    G + P++++Y +L+ G  N G + 
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDR----GVF-PNLVTYNTLIRGYANLGLVS 509

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVR 559
           +AF   + M+ +G  PN  ++ VL+R
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLR 535



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 231/477 (48%), Gaps = 36/477 (7%)

Query: 140 TIVSSICKLGQVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           T++ ++ +     +   LA R     +  Y  LIN  C    I  A   L  ++  G+ P
Sbjct: 46  TLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAP 105

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           +   Y++ +   C  G +  +  +   M +RGC     ++T+LL G L  G   EA  ++
Sbjct: 106 DSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVF 165

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
             M  +   P+   Y+T++HGLC  G  +EA  +  +   N   PN+  Y+ALIDG+  A
Sbjct: 166 VGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A +++  M  N CSPNV  YT ++  LC++    +A  L  +M      PN VT+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTY 285

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I+G C  G +  A +LL  M+    +PN  T++ L+D L +  +V+EA   +  + K
Sbjct: 286 TALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVK 345

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+++N V Y +++ G+C+ G +  A +L+ KM+ EG   DA +++ +I   C+Q K++ 
Sbjct: 346 KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQ 405

Query: 499 AIQLLDRIRGGG----------------------------------EWNPDIISYTSLLW 524
           A  +L+ +   G                                    NPDI++YT  + 
Sbjct: 406 ATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVR 465

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             C  G M++A   + +M++ G+ PN  T+N L+R  ++NLG +   +   ++M  K
Sbjct: 466 SYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG-YANLGLVSQAFSTFEVMVGK 521



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/545 (25%), Positives = 238/545 (43%), Gaps = 20/545 (3%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            + ++IN+Y   G    A +    +   GL P    Y   +         +    ++  M
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLM 133

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G     FTY  LL  L     V  A  + V M    CAPD   Y T+V  +C+ G+ 
Sbjct: 134 PLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRT 193

Query: 152 EEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA       ++  F   + VYNALI+G C   ++E A  +   M      PNV TY+ +
Sbjct: 194 EEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL 253

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC  G VE ++ +  +M   G  PN+ ++T+L++G    G    A  L + M   G 
Sbjct: 254 IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGL 313

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +PN   +S LI  LC    ++EA      + +     N   Y++LIDG  K G +  A +
Sbjct: 314 VPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADE 373

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +  +MIS G  P+  +Y+ ++  LC+     QA  ++E M  +    + VT+   I  L 
Sbjct: 374 LMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELV 433

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
                +   K+ D+M      P+I TY   +       R+++A  ++ ++   G+  N+V
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ----- 501
           TYNT++ G    G+V +AF     M+ +G K +  ++ +++    K+   +N++      
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553

Query: 502 --------LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
                   L D          DI  Y+  +  +C    ++EA  +   M N  + P+   
Sbjct: 554 DMKDLQVLLEDITERQLPLAADI--YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611

Query: 554 WNVLV 558
           +  ++
Sbjct: 612 YTSII 616



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 207/453 (45%), Gaps = 5/453 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I   +  L  +   G++     + S +  Y R G+   A ++F  +   G   T   Y 
Sbjct: 87  DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYT 146

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +L  LL          ++  M+ D   P+   Y  ++  LC+  R + A  LL E  + 
Sbjct: 147 ALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSN 206

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+ V Y  ++   C  G++E A ++       R    V  Y  LI+GLCK  K+E A
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   MV+ G++PNV+TY+ +I   C+ G+++ +  +L  M   G  PN  +F+ L+  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                +  EA      ++++G   N V Y++LI GLC  G +D A  +  +M      P+
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             +YS+LIDG  +   L  A+ +   M+  G   + V YT ++  L +         + +
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           KM      P+ VT+  F++  C  GR++ A  ++ QM      PN+ TYN L+ G   + 
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            V +AF     +   G + N  +Y  +L  V +
Sbjct: 507 LVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 191/404 (47%), Gaps = 17/404 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ ++I+ Y   G  E ALK+F  +      P V+ Y  ++  L    +      ++S M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+EPNV TY  L++  C    +  A++LL  M   G  P+  +++ ++ ++CK  +V
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 152 EEARE-LAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA+  L      GV V    Y +LI+GLCK  KI+ A  L+ +M+  G  P+  +YS++
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC    +  +  +L  M  +G   +  ++T ++   +    +     ++++MI  G 
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++V Y+  +   C  G M++A S+  QM +    PN+ TY+ LI G+A  G +  A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNM------------FHQAHSLIEKMAFENCPPN 374
            +  M+  G  PN  +YT +++++ + +                   L+E +     P  
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
              ++ FI+ LC   R++ A      M+     P+   Y  ++D
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/264 (20%), Positives = 106/264 (40%), Gaps = 52/264 (19%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +ID    L+Q+M  EG       + S+I+   R     QA  M   + E G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++ +   Y  I+D L+ E        I+  M   G+ P++ TY + +++ C+  R++ A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLG------------------------------- 149
            ++V+M ++G  P+ V+Y T++     LG                               
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLV 537

Query: 150 -------------QVEEARELAM--------RFGSGVSVYNALINGLCKEHKIEEAFWLL 188
                        ++ + ++L +        +      +Y+  I  LC+  ++EEA    
Sbjct: 538 VKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFF 597

Query: 189 CEMVDRGIDPNVITYSTIISSLCD 212
             M +  + P+   Y++II    D
Sbjct: 598 MGMQNANLTPSEDVYTSIIDCCAD 621


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 246/478 (51%), Gaps = 11/478 (2%)

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
           P+   +++ G+ P+  + N +L  L     +D A +L  E+  K    +  SY  ++ ++
Sbjct: 212 PLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLKAL 263

Query: 146 CKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           C  G++++A +L   M     V  Y  +++G C   ++E A  LL EM  RG++ N + Y
Sbjct: 264 CTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAY 323

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +++I+ LCD G V  ++ ++  M + G   +   FT+++ G+   G    A + ++ M +
Sbjct: 324 TSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK 383

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
            G   + V Y+ LI+GLC  G + EA  V  +ME+     +  TY+ LIDG+ K G +  
Sbjct: 384 RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTE 443

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  + N+M+    +PNVV YT +   LC+      A+ L+ +M  +    N  T+N+ I 
Sbjct: 444 AFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLIN 503

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           GLC  G ++ AM+ +  M +    P++ TY  ++  L +   +  A  L+ E+   GI+ 
Sbjct: 504 GLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKP 563

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            IVTYN +++G C +G V    +LL  ML +    +  T+N ++  YC +  + +  ++ 
Sbjct: 564 TIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIY 623

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +    E  P+  +Y  L+ G C +  M+EA  +  +M+ +G     +++N L+R L
Sbjct: 624 KGML-SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLL 680



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 253/483 (52%), Gaps = 21/483 (4%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           ++A+++F  + E   K T   YN +L AL    R    + ++  M      P+V TY I+
Sbjct: 239 DEAVQLFQELPE---KNTCS-YNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIM 291

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGV 165
           +   C  + ++ A KLL EM  +G   + V+YT++++ +C  GQV +A R +      GV
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 166 ----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
               +V+  +++G C++  +  A     EM  RG+  + +TY+ +I+ LC  G ++ +  
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M  +G + +  ++T L+ GY   G+  EA  + N+M+++   PNVV Y+ L  GLC
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +  A  + ++M       N+ TY++LI+G  KAGNL  A +    M   G  P+V 
Sbjct: 472 KQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVY 531

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++  LCQ+    +AHSL+++M  +   P  VT+N  + G C  GRV+   +LL+ M
Sbjct: 532 TYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM 591

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV----TYNTILHGVCR 457
            +    PN TTYN L+        +++  +  TEI K  +   +V    TYN ++ G C+
Sbjct: 592 LEKNIHPNTTTYNSLMKQYC----IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCK 647

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-EWNPDI 516
           A  + EA     +M+ +G +L A ++N +I    K+ K   A +L +++R       PD+
Sbjct: 648 ARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV 707

Query: 517 ISY 519
            ++
Sbjct: 708 YNF 710



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 236/505 (46%), Gaps = 14/505 (2%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           +  +D    L Q++  E  +CS  + +  + +  R+  A Q         E    P V  
Sbjct: 235 RLPLDEAVQLFQELP-EKNTCSYNILLKALCTAGRIKDAHQLFD------EMASPPDVVT 287

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  ++      +       + S M   G+E N   Y  ++  LC   +V  A +++ +M 
Sbjct: 288 YGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMV 347

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR--FGSGVSVYNALINGLCKEHKI 181
             G   DA  +TT++S  C+ G +  AR    E+  R     GV+ Y ALINGLC+  ++
Sbjct: 348 MHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT-YTALINGLCRAGEL 406

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +EA  +L EM D+G+D + +TY+ +I   C VG +  +  +  +M  +   PN+ ++T+L
Sbjct: 407 KEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTAL 466

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
             G    G    A++L + M  +G   N+  Y++LI+GLC  G++++A+     M+E   
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGL 526

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+V TY+ +I    ++  L  A  +   M+  G  P +V Y  ++   C +        
Sbjct: 527 KPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKR 586

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+E M  +N  PNT T+N+ +K  C    +    ++   M   E +PN  TYN L+ G  
Sbjct: 587 LLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC 646

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   +KEA    +E+ + G +L   +YN ++  + +     EA +L  KM  E    +  
Sbjct: 647 KARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRI 506
            +N  I     +  + + + L D +
Sbjct: 707 VYNFYIDLSFNEDNLESTLALCDEL 731



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 192/420 (45%), Gaps = 5/420 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ ++     +++ M + GV     VF +V++ + R G    A   F  +++ G
Sbjct: 326 VIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRG 385

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      Y  +++ L           +   M+  G++ +  TY +L+   CK  ++  A+
Sbjct: 386 LAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAF 445

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            +  +M  K   P+ V+YT +   +CK G V  A EL     S      +  YN+LINGL
Sbjct: 446 LVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGL 505

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   +E+A   + +M + G+ P+V TY+TII +LC    ++ +  +L +M  +G  P I
Sbjct: 506 CKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTI 565

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ G+ + GR      L   M+ +   PN   Y++L+   C   +M     +   
Sbjct: 566 VTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKG 625

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      PN  TY+ LI G  KA N+  A    + MI  G      +Y  ++++L +   
Sbjct: 626 MLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A  L EKM  E        +N +I        ++  + L D++ +   + +I   ++
Sbjct: 686 FTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLVKSIADTDD 745



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+  + + GI  +  + N +L   CR  +  EA QL  ++  + T     ++NI++ A C
Sbjct: 213 LLLRLRQYGISPSPESCNAVL---CRLPLD-EAVQLFQELPEKNT----CSYNILLKALC 264

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
             G++ +A QL D +       PD+++Y  ++ G C    ++ A   L +M   G+  N 
Sbjct: 265 TAGRIKDAHQLFDEMASP----PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNP 320

Query: 552 ATWNVLVRSLFSNLGHLG-PVYILDDIM 578
             +  ++ +L  + G +   V +++D++
Sbjct: 321 VAYTSVI-ALLCDEGQVSDAVRVVEDMV 347


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 247/517 (47%), Gaps = 6/517 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           ++D    +L++M  +G        +  VI    + G    A+K+F  + E  + P    Y
Sbjct: 167 DLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITY 226

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N ++D  + +        ++S M R G++PNV TYN+LL  LC+  R+     +L EM +
Sbjct: 227 NTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMAS 286

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSVY--NALINGLCKEHKIEE 183
           +   PD  +Y+ +     + G  +    L   +++ G  +  Y  + L+NGLCK+ KI +
Sbjct: 287 RKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISK 346

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  +L  +V+ G+    + Y+T+I+  C +G++E +  I  QM  R   P+  ++ +L+ 
Sbjct: 347 AEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALIN 406

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G     R  EA DL   M + G  P+V  ++TLI      G +++   +   M+E    P
Sbjct: 407 GLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKP 466

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           NV +Y ++++ F K G +L A  I + M      P    Y  ++    +     QA  L 
Sbjct: 467 NVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLA 526

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           EKM     PP+ VT+N  IKGLC   ++  A +LLD ++ Y   P++ +YN L+      
Sbjct: 527 EKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYR 586

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           +    A EL  E+ KCGI+ +  TY  +   +  AG V E   L  +ML +     +  +
Sbjct: 587 SNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIY 646

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           NI++ AY K G+ +    L   +   G    D  S T
Sbjct: 647 NIMVDAYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 246/526 (46%), Gaps = 8/526 (1%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGME-PNVFTYNILLKALCKNNRVDGAY 120
           +P    +N  + A +          +   M  DG   PN F+YN+++  L K      A 
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGL 175
           KL  EM  K   P+ ++Y T++    K G +E    L    +R G    V  YN L++GL
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  ++ E   +L EM  R + P+  TYS +       G+ +T L +  +   +G     
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++ + LL G    G+  +A ++   ++  G L   V Y+TLI+G C  G ++ A S+  Q
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+     P+  TY+ALI+G  K   +  A  +   M  NG +P+V  +  ++    +   
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +   ++  M  +   PN V++ + +   C  G++  A+ +LD M   + LP    YN 
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNA 508

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++D  +      +AF L  +++  G+  +IVTYN ++ G+C+   + EA +LL  +   G
Sbjct: 509 IIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D I++N +I A C +   + A++L   +   G   P   +Y  L   +  +G + E 
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCG-IKPSPRTYRMLFSSLGGAGRVHEM 627

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
               Q+ML++ + P    +N++V + ++  G    V  L   M++K
Sbjct: 628 ENLYQQMLDKDVVPCSGIYNIMVDA-YAKCGEESKVEALRKEMSDK 672



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 209/412 (50%), Gaps = 14/412 (3%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM-VDRGIDPNVITYSTIISSLCDVGN 215
           +A R       +N  +        ++EA  +L  M  D    PN  +Y+ +I+ L   G 
Sbjct: 144 VAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGT 203

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
              ++ +  +M  +   PN  ++ +++ G++  G       LW++M+R G  PNV+ Y+ 
Sbjct: 204 DCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNV 263

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           L+ GLC  G M E  +V  +M      P+  TYS L DG ++ G+      ++   +  G
Sbjct: 264 LLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKG 323

Query: 336 CSPNVVAYTCMVKV--LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               + AYTC + +  LC++    +A  +++ +        TV +NT I G C  G ++ 
Sbjct: 324 V--KIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEG 381

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A  +  QMK     P+  TYN L++GL +V R+ EA +LV E+EK G+  ++ T+NT++ 
Sbjct: 382 AFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLID 441

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
              RAG + + F +L  M  +G K + +++  I+ A+CK GK+  A+ +LD +     + 
Sbjct: 442 AYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDM-----FI 496

Query: 514 PDIIS----YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            D++     Y +++      G   +AF+  +KM + G+ P+  T+N+L++ L
Sbjct: 497 KDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 217/487 (44%), Gaps = 43/487 (8%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K G  C  D V+ L  +M  + V  +   + ++I+ + + G  E   +++ ++   GLKP
Sbjct: 200 KAGTDC--DAVK-LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKP 256

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL----------------- 106
            V  YN +L  L    R      +   M    M P+ FTY+IL                 
Sbjct: 257 NVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLF 316

Query: 107 ------------------LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
                             L  LCK+ ++  A ++L  + N G     V Y T+++  C++
Sbjct: 317 EESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQI 376

Query: 149 GQVEEARELAMRFGSGV-----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G +E A  +  +  S +       YNALINGL K  +I EA  L+ EM   G++P+V T+
Sbjct: 377 GDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETF 436

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           +T+I +    G +E    IL  M  +G  PN+ S+ S++  +   G+  EA  + + M  
Sbjct: 437 NTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFI 496

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +  LP    Y+ +I      GS D+A  ++ +M+ +  PP++ TY+ LI G  K   +  
Sbjct: 497 KDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISE 556

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A ++ + + + G +P+V++Y  ++   C  +   +A  L ++M      P+  T+     
Sbjct: 557 AEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFS 616

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
            L G GRV     L  QM   + +P    YN ++D   +     +   L  E+   GI +
Sbjct: 617 SLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAV 676

Query: 444 NIVTYNT 450
              T  T
Sbjct: 677 GDYTSMT 683



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 131/299 (43%), Gaps = 30/299 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG+   I     L+ +M+  GV+ S   F ++I++Y R G  E+   +   ++E G
Sbjct: 404 LINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKG 463

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y  I++A     +      I  +M    + P    YN ++ A  +    D A+
Sbjct: 464 LKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAF 523

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +M + G  P  V+Y  ++  +CK  Q+ EA E                        
Sbjct: 524 MLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE------------------------ 559

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 LL  + + G+ P+VI+Y+T+IS+ C   N + +L +  +M+  G  P+  ++  
Sbjct: 560 ------LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRM 613

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           L       GR HE  +L+ +M+ +  +P    Y+ ++      G   +  ++  +M + 
Sbjct: 614 LFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDK 672


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 273/561 (48%), Gaps = 49/561 (8%)

Query: 49  ALKMFYRIREFGLK----PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           A+++F R+  +       PT+  YN ++D     +R  +   I   + ++G+ P+ F+Y+
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 195

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GS 163
            L+    K+  VD A+ L +EM  +G  P  +   +I+  +CK+ ++++A  +  +   S
Sbjct: 196 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 164 GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G++     Y+ +I+GLCK   +++A  +L +MV+ G  PN ITY+++I      G    S
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           + +  QM   G  P + +  S +      GRT+EA  +++ M+ +G  P++++YST++HG
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374

Query: 280 LCSN-------------------------------------GSMDEAVSVSYQMEENSCP 302
             +                                      G MD+A+ +   M+     
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 434

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+  T++ +I    + G L  A   +N M+  G  P+   Y C+++  C +    +A  L
Sbjct: 435 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 494

Query: 363 IEKMAFENCPPNTVT-FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           I +M  ++ PP  V  F++ I  LC  GRV     ++D M Q    PN+ T+N L++G  
Sbjct: 495 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 554

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
            V  ++EAF L+  +   GI+ N   Y T++ G C+ G + +A  +   ML +G K  ++
Sbjct: 555 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 614

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            ++II++   +  +   A ++   +   G     I +Y  +L G+C +    EA + L+K
Sbjct: 615 LYSIILHGLFQARRTTAAKKMFHEMIESGT-TVSIHTYGVVLGGLCRNNCTDEANMLLEK 673

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           +    +  +  T+N+++ ++F
Sbjct: 674 LFAMNVKFDIITFNIVISAMF 694



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 258/541 (47%), Gaps = 21/541 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+I  + + G  ++A  +F  + E G+ P + I N I+  L           I   M   
Sbjct: 195 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P++FTY++++  LCK+  +D A ++L +M   G  P++++Y +++      G   E+
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII-- 207
             +  +  S      V   N+ I+ L K  +  EA  +   MV +G  P++I+YST++  
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374

Query: 208 ------SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
                 S L DV N      I   M  +G  PN H F  L+  Y   G   +A  ++  M
Sbjct: 375 YATATDSCLADVHN------IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 428

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G +P+ V ++T+I  LC  G +D+A+     M +   PP+   Y  LI G    G L
Sbjct: 429 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 488

Query: 322 LGASQIWNRMISNGCSPNVVAY-TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           + A ++ + M++    P  V Y + ++  LC+     +   +++ M      PN VTFN+
Sbjct: 489 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 548

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            ++G C  G ++ A  LLD M      PN   Y  L+DG  +  R+ +A  +  ++   G
Sbjct: 549 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 608

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++   V Y+ ILHG+ +A     A ++  +M+  GT +   T+ +++   C+    + A 
Sbjct: 609 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 668

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            LL+++        DII++  ++  +   G  QEA      +   G+ PN  T+++++ +
Sbjct: 669 MLLEKLF-AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 727

Query: 561 L 561
           L
Sbjct: 728 L 728



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 258/539 (47%), Gaps = 43/539 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM   G   +   + S+I+ Y   G+  +++++F ++   G
Sbjct: 266 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY----------------- 103
           + PTV   N  + AL    R +    I+ +M   G +P++ +Y                 
Sbjct: 326 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 385

Query: 104 --------------------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
                               NIL+ A  +   +D A  +  +M NKG  PD V++ T++S
Sbjct: 386 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 445

Query: 144 SICKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S+C++G++++A  +       GV    +VY  LI G C   ++ +A  L+ EM+++ I P
Sbjct: 446 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 505

Query: 199 NVITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
             + Y S+II++LC  G V     I+  M   G  PN+ +F SL++GY L G   EA  L
Sbjct: 506 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 565

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + M   G  PN   Y TL+ G C NG +D+A++V   M      P    YS ++ G  +
Sbjct: 566 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 625

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A     A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +T
Sbjct: 626 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 685

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           FN  I  +   GR   A +L D +  Y  +PNI TY+ ++  L++    +EA  L   +E
Sbjct: 686 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           K G   +    N I+  +     V +A   L  +      L+A T +++   + ++G +
Sbjct: 746 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 804



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 265/574 (46%), Gaps = 10/574 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +  E+D  + ++Q+M   G++     +  +I+   +    ++A ++  ++ E G
Sbjct: 231 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 290

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN ++        ++    ++  M   G+ P V   N  + AL K+ R + A 
Sbjct: 291 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 350

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICK-----LGQVEEARELAMRFG--SGVSVYNALIN 173
            +   M  KG  PD +SY+T++          L  V     L +  G      V+N LIN
Sbjct: 351 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 410

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
              +   +++A  +  +M ++G+ P+ +T++T+ISSLC +G ++ +L     M   G  P
Sbjct: 411 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 470

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY-STLIHGLCSNGSMDEAVSV 292
           +   +  L++G    G   +A +L + M+ +   P  V Y S++I+ LC  G + E   +
Sbjct: 471 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 530

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M +    PNV T+++L++G+   GN+  A  + + M S G  PN   Y  +V   C+
Sbjct: 531 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 590

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           N     A ++   M  +   P +V ++  + GL    R   A K+  +M +     +I T
Sbjct: 591 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 650

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  +L GL R N   EA  L+ ++    ++ +I+T+N ++  + + G   EA +L   + 
Sbjct: 651 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 710

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   +  T++++I    K+     A  L   +   G  + D      ++  + N   +
Sbjct: 711 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS-DSRLLNHIVRMLLNKAEV 769

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
            +A  YL  +    +    +T ++L  SLFS  G
Sbjct: 770 AKASNYLSIIGENNLTLEASTISLLA-SLFSREG 802


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 268/586 (45%), Gaps = 47/586 (8%)

Query: 14   VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            ++ LLQQ ++E    + GV  S++ S      + + L   + +    LK        +L 
Sbjct: 435  LRVLLQQNRIE---TARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYL--LLS 489

Query: 74   ALLAENRF-SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
             LL E++  S    ++  ++ +G+ P+  +  +LL  L K  +      + + +      
Sbjct: 490  VLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFR 549

Query: 133  PDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
            P    Y   + +  KL  V +  EL       R    V +YN LI+GLCK  ++++A  L
Sbjct: 550  PSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQL 609

Query: 188  LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
              EM+ R + P++ITY+T+I   C  GN E S  +  +M      P++ +F +LLKG   
Sbjct: 610  FDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFK 669

Query: 248  GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV-------SYQMEENS 300
             G   +A ++   M  +GF+P+   +S L  G  SN   D A+ V         +M   +
Sbjct: 670  AGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYT 729

Query: 301  CP----------------------------PNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            C                             PN   Y+ +IDG+++ G+L+GA    + M 
Sbjct: 730  CSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAME 789

Query: 333  SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
              G  P+ +AY C+++  C+      A   + KM  +   P+  T+N  I G       D
Sbjct: 790  KQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFD 849

Query: 393  WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                LL +M+    +PN+ +Y  L++ L + +++ EA  +  ++E  G+  N+  YN ++
Sbjct: 850  KCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLI 909

Query: 453  HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
             G C  G + +AF+   +M  +G +L+ +T+N +I      GK+  A  +L  I   G  
Sbjct: 910  DGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG-L 968

Query: 513  NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             PD+ +Y SL+ G   +G +Q      ++M   GI P   T+++L+
Sbjct: 969  KPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI 1014



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/570 (25%), Positives = 278/570 (48%), Gaps = 18/570 (3%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I+ L +  ++   + L  +M    +  S   + ++I+ Y + G  E++ K+  R++   
Sbjct: 593  LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADN 652

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            ++P++  +N +L  L           + + MK  G  P+ FT++IL      N++ D A 
Sbjct: 653  IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
             +     + G   +A + + +++++CK GQ+E+A     RE+A        +YN +I+G 
Sbjct: 713  GVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGY 772

Query: 176  CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             ++  +  A   +  M  +G+ P+ + Y+ +I + C++G++E +   + +M ++G +P++
Sbjct: 773  SRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSV 832

Query: 236  HSFTSLLKGYLLGGRTHEAS---DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
             ++  L+ GY   GR +E     DL   M   G +PNVV+Y TLI+ LC    + EA  V
Sbjct: 833  ETYNILIGGY---GRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 889

Query: 293  SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
               ME+    PNV  Y+ LIDG    G +  A +    M   G   N+V Y  ++  L  
Sbjct: 890  KRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSM 949

Query: 353  NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
            N    +A  ++ +++ +   P+  T+N+ I G    G V   + L ++MK     P + T
Sbjct: 950  NGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKT 1009

Query: 413  YNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            Y+ L+         KE  EL  +I  +  +Q +++ YN +LH     G + +AF L  +M
Sbjct: 1010 YHLLISLC-----TKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQM 1064

Query: 472  LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
            + +   LD  T+N +I    K GK+     L+D ++   E  P+  +Y  ++ G C    
Sbjct: 1065 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMK-AREMEPEADTYDIIVKGHCEMKD 1123

Query: 532  MQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               A+++ ++M  +G+  +    + LV  L
Sbjct: 1124 YMGAYVWYREMQEKGLLLDVCIGDELVSGL 1153



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/581 (24%), Positives = 260/581 (44%), Gaps = 70/581 (12%)

Query: 48   QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
            +A  +F+ +R  G+ P+      +LD L+   +F +   ++ N+      P+ F Y   +
Sbjct: 500  EAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 559

Query: 108  KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFG 162
            +A  K + V    +L   M +   +P    Y  ++  +CK+ Q+++A +L     A R  
Sbjct: 560  QAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLL 619

Query: 163  SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
              +  YN LI+G CK+   E++F +   M    I+P++IT++T++  L   G VE +  +
Sbjct: 620  PSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENV 679

Query: 223  LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
            L +M  +G  P+  +F+ L  GY    +   A  ++   +  G   N    S L++ LC 
Sbjct: 680  LTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCK 739

Query: 283  NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
             G +++A  +  +       PN   Y+ +IDG+++ G+L+GA    + M   G  P+ +A
Sbjct: 740  EGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLA 799

Query: 343  YTCMVKVLCQ-----------NNM------------------------FHQAHSLIEKMA 367
            Y C+++  C+           N M                        F +   L+++M 
Sbjct: 800  YNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEME 859

Query: 368  FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                 PN V++ T I  LC   ++  A  +   M+     PN+  YN L+DG     +++
Sbjct: 860  DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919

Query: 428  EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            +AF    E+ K GI+LN+VTYNT++ G+   G + EA  +L ++  +G K D  T+N +I
Sbjct: 920  DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979

Query: 488  YAYCKQGKVNNAIQLLDRIRGGG------------------------------EWNPDII 517
              Y   G V   I L + ++  G                                 PD++
Sbjct: 980  SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLL 1039

Query: 518  SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             Y  +L      G M +AF   ++M+ + I  +  T+N L+
Sbjct: 1040 VYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLI 1080



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 232/503 (46%), Gaps = 9/503 (1%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            ++  + +L +MK +G       F  + + Y     A+ AL ++    + GLK      + 
Sbjct: 673  VEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSI 732

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            +L+AL  E +      I       G+ PN   YN ++    +   + GA   +  M  +G
Sbjct: 733  LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792

Query: 131  CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
              PD ++Y  ++ + C+LG +E A +   +         V  YN LI G  ++++ ++ F
Sbjct: 793  MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852

Query: 186  WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
             LL EM D G  PNV++Y T+I+ LC    +  +  +   M  RG +PN+  +  L+ G 
Sbjct: 853  DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGC 912

Query: 246  LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               G+  +A      M ++G   N+V Y+TLI GL  NG + EA  +  ++      P+V
Sbjct: 913  CSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDV 972

Query: 306  TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             TY++LI G+  AGN+     ++  M ++G  P +  Y  ++  LC          +  +
Sbjct: 973  FTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS-LCTKEGIELTKKIFGE 1031

Query: 366  MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
            M+ +   P+ + +N  +      G +D A  L  QM +     + TTYN L+ G L+V +
Sbjct: 1032 MSLQ---PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 1088

Query: 426  VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            + E   L+ E++   ++    TY+ I+ G C     + A+    +M  +G  LD    + 
Sbjct: 1089 LCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDE 1148

Query: 486  IIYAYCKQGKVNNAIQLLDRIRG 508
            ++    ++ +   A  ++  + G
Sbjct: 1149 LVSGLKEEWRSKEAENVISEMNG 1171



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 227/491 (46%), Gaps = 19/491 (3%)

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
           FS+ +P   ++K D      F+Y +L   L ++  +  A  L   + N+G  P + S T 
Sbjct: 472 FSLSSP---SLKHD------FSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTL 522

Query: 141 IVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++  + K  Q           L   F     +Y   I    K   + +   L   M    
Sbjct: 523 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 582

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I P V  Y+ +I  LC V  ++ +  +  +M  R   P++ ++ +L+ GY   G   ++ 
Sbjct: 583 ISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSF 642

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            +  RM  +   P+++ ++TL+ GL   G +++A +V  +M++    P+  T+S L DG+
Sbjct: 643 KVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGY 702

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTC--MVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           +       A  ++   + +G   N  AYTC  ++  LC+     +A  ++ +   +   P
Sbjct: 703 SSNDKADAALGVYETAVDSGLKMN--AYTCSILLNALCKEGQIEKAEEILGREMAKGLVP 760

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N V +NT I G    G +  A   +D M++    P+   YN L+     +  ++ A + V
Sbjct: 761 NEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEV 820

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            +++  G+  ++ TYN ++ G  R     + F LL +M   GT  + +++  +I   CK 
Sbjct: 821 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKG 880

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            K+  A Q++ R       +P++  Y  L+ G C+ G +++AF + ++M  +GI  N  T
Sbjct: 881 SKLLEA-QIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVT 939

Query: 554 WNVLVRSLFSN 564
           +N L+  L  N
Sbjct: 940 YNTLIDGLSMN 950



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 177/402 (44%), Gaps = 36/402 (8%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            +I    E  +++  +  + +MK++GVS S   +  +I  Y R    ++   +   + + G
Sbjct: 803  LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862

Query: 61   LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              P V  Y  +++ L   ++      +  +M+  G+ PNV  YN+L+   C   +++ A+
Sbjct: 863  TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAF 922

Query: 121  KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +   EM  KG   + V+Y                              N LI+GL    K
Sbjct: 923  RFSEEMFKKGIELNLVTY------------------------------NTLIDGLSMNGK 952

Query: 181  IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            + EA  +L E+  +G+ P+V TY+++IS     GNV+  + +  +M   G  P + ++  
Sbjct: 953  LAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH- 1011

Query: 241  LLKGYLLGGRTHEASDLWNRMIREGFL-PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
                 L+   T E  +L  ++  E  L P+++ Y+ ++H    +G MD+A ++  QM E 
Sbjct: 1012 ----LLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEK 1067

Query: 300  SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            S   + TTY++LI G  K G L     + + M +    P    Y  +VK  C+   +  A
Sbjct: 1068 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGA 1127

Query: 360  HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +    +M  +    +    +  + GL    R   A  ++ +M
Sbjct: 1128 YVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 244/463 (52%), Gaps = 5/463 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  ++++Y +    ++AL+    ++E  + P  +  N +L  LL  N+  M   +Y  M
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            +  ++ ++ T+NI++  LC+  +   A   +  M   G  P+ V+Y T+++  C  G+ 
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268

Query: 152 EEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E A ++   M+          YN+ I+ LCKE +IEEA  +LC++++ G+ PN +TY+ +
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNAL 328

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C+ G+++ +     +M  RG   ++ ++  L+    L  R  EA D+   M  +G 
Sbjct: 329 IDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P+VV Y+  I+G C  G+  +A+S+  +M E +  P V TY++LID F K   +  A +
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
            + + I  G  P+++ +  ++   C N    +A  L+++M      P+ VTFNT ++G C
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYC 508

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
              +V+ A KLLD+MK+    P+  +YN L+ G  +   +K+A E+  E+   G    ++
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLL 568

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           TYN ++ G  + G    A +LL +M  +G   D  T+  +I A
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 203/386 (52%), Gaps = 2/386 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I+ A+++  EMV   I  +++T++ +I+ LC  G  + +   +G M V G  PN+ ++ +
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++ GY L G+   AS ++  M  +   P+   Y++ I  LC    ++EA  V  ++ E+ 
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PN  TY+ALIDG    G+L  A    + M++ G   +V  Y  ++  L       +A 
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            +I++M  +   P+ VT+N  I G C CG    A+ L D+M +    P + TY  L+D  
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            + NR+ EA E   +  K G+  +I+ +N ++ G C  G +  AFQLL +M       D 
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +TFN ++  YC++ KV  A +LLD ++  G   PD ISY +L+ G    G M++A     
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERG-IKPDHISYNTLISGYSKRGDMKDALEVFD 556

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLG 566
           +ML+ G  P   T+N L++  +S +G
Sbjct: 557 EMLSLGFDPTLLTYNALIQG-YSKIG 581



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 208/403 (51%), Gaps = 5/403 (1%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           ++ ++M    +  S   F  +IN   R G  ++A      +  +G+KP V  YN +++  
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
               +F   + I+  MK   ++P+ +TYN  +  LCK  R++ A  +L ++   G  P+A
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322

Query: 136 VSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCE 190
           V+Y  ++   C  G +++A   R+  M  G  + V  YN LI+ L  E +IEEA  ++ E
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M ++G++P+V+TY+  I+  C  GN + +L +  +M  +   P + ++TSL+  +    R
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA + + + I+EG LP+++ ++ LI G C NG++D A  +  +M+     P+  T++ 
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+ G+ +   +  A ++ + M   G  P+ ++Y  ++    +      A  + ++M    
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLG 562

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
             P  +T+N  I+G    G  D A +LL +M+     P+ +TY
Sbjct: 563 FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 202/411 (49%), Gaps = 5/411 (1%)

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           +  +K ++  +N +++ L  E ++        +M+  G++PNV TYN ++   C   + +
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALI 172
            A K+   M +K   PD  +Y + +S +CK  ++EEA     + L          YNALI
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G C +  +++AF    EM++RGI  +V TY+ +I +L     +E +  ++ +M  +G  
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ ++   + GY   G   +A  L++ M+ +   P V  Y++LI        M EA   
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK 449

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             +  +    P++  ++ALIDG    GN+  A Q+   M +    P+ V +  +++  C+
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR 509

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +A  L+++M      P+ +++NT I G    G +  A+++ D+M      P + T
Sbjct: 510 ERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLT 569

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
           YN L+ G  ++     A EL+ E++  GI  +  TY  ++  +     +VE
Sbjct: 570 YNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 169/375 (45%), Gaps = 40/375 (10%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
            M+V GV  +   + +VIN Y   G  E A K+F  +++  LKP    YN  +  L  E 
Sbjct: 242 HMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKER 301

Query: 80  RFSMINPIYSNMKRDGMEPN-----------------------------------VFTYN 104
           R    + +   +   G+ PN                                   VFTYN
Sbjct: 302 RIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYN 361

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AM 159
           +L+ AL    R++ A  ++ EM  KG  PD V+Y   ++  C+ G  ++A  L       
Sbjct: 362 LLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEK 421

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                V  Y +LI+   K +++ EA     + +  G+ P++I ++ +I   C  GN++ +
Sbjct: 422 NIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRA 481

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +L +M      P+  +F +L++GY    +  EA  L + M   G  P+ ++Y+TLI G
Sbjct: 482 FQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISG 541

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G M +A+ V  +M      P + TY+ALI G++K G    A ++   M S G +P+
Sbjct: 542 YSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPD 601

Query: 340 VVAYTCMVKVLCQNN 354
              Y  +++ +  N+
Sbjct: 602 DSTYLYVIEAMKTND 616



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 30/288 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  +  I+  + ++++M+ +GV      +   IN Y R G A++AL +F  + E  
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PTV+ Y  ++D     NR S     +    ++GM P++  +N L+   C N  +D A+
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +LL EM N    PD V++                              N L+ G C+E K
Sbjct: 483 QLLKEMDNAKVVPDEVTF------------------------------NTLMQGYCRERK 512

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +EEA  LL EM +RGI P+ I+Y+T+IS     G+++ +L +  +M   G +P + ++ +
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           L++GY   G    A +L   M  +G  P+   Y  +I  + +N  + E
Sbjct: 573 LIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVE 620



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 110/207 (53%), Gaps = 2/207 (0%)

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T+ F+  +   C   + D A++ L+ MK+ E +P   T N LL  LL++N++K A+ +  
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+ K  I+ +IVT+N +++ +CR G   +A   +G M + G K + +T+N +I  YC +G
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           K   A ++   ++      PD  +Y S +  +C    ++EA   L K+L  G+ PN  T+
Sbjct: 267 KFEAASKIFKTMKDKN-LKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 555 NVLVRSLFSNLGHLGPVYILDDIMANK 581
           N L+     N G L   +   D M N+
Sbjct: 326 NALIDGC-CNKGDLDKAFAYRDEMMNR 351


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/490 (29%), Positives = 245/490 (50%), Gaps = 13/490 (2%)

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
           S+I   YS     G++P+V T  I++  LC        + +L  M   G  P  V++ T+
Sbjct: 28  SLIKHTYSL----GVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATL 83

Query: 142 VSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLL--CEMVDR 194
           ++ +C  G V  A   A     M + S    +  +INGLCK      A   L   E  +R
Sbjct: 84  INGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNR 143

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           G D  +I YSTI+ SLC  G +  +L     M  +G  P++ ++ SL+ G    GR +EA
Sbjct: 144 GFDL-LIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEA 202

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
           + L   M+R+G +PNV  ++ L+   C  G +  A ++   M      P+V TY+++I G
Sbjct: 203 TTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISG 262

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
                 +  A +++  MI  G  PNVV Y+ ++   C+    ++A  ++++M       +
Sbjct: 263 HCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLD 322

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            VT++T I G C  GR + A++L   M ++  LPN+ T   +LDGL +     EA  L  
Sbjct: 323 VVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFR 382

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++EK  ++LNIVTYN +L G+C  G   +A +L   +  +G ++D + +  +I   CK+G
Sbjct: 383 KMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEG 442

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            +++A  LL ++   G   P+  +Y  L+ G+     +  +  YL  M  +G+  +  T 
Sbjct: 443 LLDDAEDLLMKMEENG-CPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTT 501

Query: 555 NVLVRSLFSN 564
            +L+    +N
Sbjct: 502 ELLISYFSAN 511



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 226/468 (48%), Gaps = 6/468 (1%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           A+ +       G+KP V     +++ L           +   M + G+EP V T+  L+ 
Sbjct: 26  AISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLIN 85

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE------EARELAMRFG 162
            LC    V  A +    + + G   ++ ++ TI++ +CK+G         E  E   R  
Sbjct: 86  GLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGF 145

Query: 163 SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +  Y+ +++ LCK+  +  A      M  +GI P+++ Y+++I  LC  G    +  +
Sbjct: 146 DLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTL 205

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           LG M  +G  PN+ +F  L+  +   G+   A  +   M+  G  P+VV Y+++I G C 
Sbjct: 206 LGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCL 265

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
              M++AV V   M      PNV TYS+LI G+ K  N+  A  + + M++NG + +VV 
Sbjct: 266 LSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVT 325

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           ++ ++   C+      A  L   M   +  PN  T    + GL  C     A+ L  +M+
Sbjct: 326 WSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKME 385

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +     NI TYN +LDG+    +  +A EL + +   GIQ+++V Y T++ G+C+ G++ 
Sbjct: 386 KMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLD 445

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +A  LL KM   G   +  T+N+++    ++  ++ + + L  ++G G
Sbjct: 446 DAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKG 493



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 166/325 (51%), Gaps = 5/325 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + ++++S  + G+   AL  F  +   G++P +  YN ++  L +  R++    +  NM 
Sbjct: 151 YSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMM 210

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G+ PNV T+N+L+   CK  ++  A  ++  M + G  PD V+Y +++S  C L Q+ 
Sbjct: 211 RKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMN 270

Query: 153 EAR---ELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +A    EL +  G    V  Y++LI+G CK   I +A ++L EMV+ G++ +V+T+ST+I
Sbjct: 271 DAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLI 330

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
              C  G  E ++ +   M      PN+ +   +L G        EA  L+ +M +    
Sbjct: 331 GGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLE 390

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
            N+V Y+ ++ G+CS G  ++A  +   +       +V  Y+ +I G  K G L  A  +
Sbjct: 391 LNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDL 450

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQ 352
             +M  NGC PN   Y  +V+ L Q
Sbjct: 451 LMKMEENGCPPNEFTYNVLVRGLLQ 475



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 190/397 (47%), Gaps = 2/397 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +  L   + K      A  L+      G+ P+V T + +I+ LC + +      +LG MF
Sbjct: 10  FATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMF 69

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G  P + +F +L+ G    G    A+   + +   G+  N   + T+I+GLC  G   
Sbjct: 70  KIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTA 129

Query: 288 EAVSVSYQME-ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            A+S   ++E  N     +  YS ++D   K G L  A   ++ M   G  P++VAY  +
Sbjct: 130 GAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSL 189

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC    +++A +L+  M  +   PN  TFN  +   C  G++  A  ++  M     
Sbjct: 190 IHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGV 249

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P++ TYN ++ G   ++++ +A ++   +   G+  N+VTY++++HG C+   + +A  
Sbjct: 250 EPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIF 309

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L +M+  G  LD +T++ +I  +CK G+   AI+L   +    +  P++ +   +L G+
Sbjct: 310 VLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQL-PNLQTCAIILDGL 368

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
                  EA    +KM    +  N  T+N+++  + S
Sbjct: 369 FKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCS 405



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 160/338 (47%), Gaps = 5/338 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M  +G+      + S+I+     G   +A  +   +   G+ P V+ +N ++D    E +
Sbjct: 174 MTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGK 233

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
            S    I   M   G+EP+V TYN ++   C  ++++ A K+   M +KG  P+ V+Y++
Sbjct: 234 ISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSS 293

Query: 141 IVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++   CK   + +A       +       V  ++ LI G CK  + E A  L C M +  
Sbjct: 294 LIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHH 353

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             PN+ T + I+  L        ++ +  +M       NI ++  +L G    G+ ++A 
Sbjct: 354 QLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDAR 413

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L++ +  +G   +VVAY+T+I GLC  G +D+A  +  +MEEN CPPN  TY+ L+ G 
Sbjct: 414 ELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +  ++  +++    M   G S +      ++     N
Sbjct: 474 LQRYDISRSTKYLMLMKGKGLSADATTTELLISYFSAN 511



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 150/318 (47%), Gaps = 8/318 (2%)

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP    ++TL   +        A+S+          P+V T + +I+      + +    
Sbjct: 4   LPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFS 63

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL---IEKMAFENCPPNTVTFNTFIK 383
           +   M   G  P VV +  ++  LC       A      +E M +E+   N+ T  T I 
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYES---NSYTHGTIIN 120

Query: 384 GLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           GLC  G    A+  L++++ +      +  Y+ ++D L +   +  A    + +   GIQ
Sbjct: 121 GLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQ 180

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            ++V YN+++HG+C  G   EA  LLG M+ +G   +  TFN+++  +CK+GK++ A  +
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +  +   G   PD+++Y S++ G C    M +A    + M+++G+ PN  T++ L+    
Sbjct: 241 MCFMVHVG-VEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWC 299

Query: 563 SNLGHLGPVYILDDIMAN 580
                   +++LD+++ N
Sbjct: 300 KTRNINKAIFVLDEMVNN 317



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 139/305 (45%), Gaps = 5/305 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  +G+  +   F  +++++ + G   +A  +   +   G++P V  YN ++    
Sbjct: 205 LLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHC 264

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             ++ +    ++  M   G+ PNV TY+ L+   CK   ++ A  +L EM N G   D V
Sbjct: 265 LLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVV 324

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEM 191
           +++T++   CK G+ E A EL         + N      +++GL K     EA  L  +M
Sbjct: 325 TWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKM 384

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
               ++ N++TY+ ++  +C  G    +  +   +  +G   ++ ++T+++KG    G  
Sbjct: 385 EKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLL 444

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A DL  +M   G  PN   Y+ L+ GL     +  +      M+      + TT   L
Sbjct: 445 DDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELL 504

Query: 312 IDGFA 316
           I  F+
Sbjct: 505 ISYFS 509



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 106/223 (47%), Gaps = 6/223 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+   ++L +M   G++     + ++I  + + G  E A+++F  + E    P ++    
Sbjct: 304 INKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAI 363

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ILD L      S    ++  M++  +E N+ TYNI+L  +C   + + A +L   + +KG
Sbjct: 364 ILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKG 423

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
              D V+YTT++  +CK G +++A +L M+            YN L+ GL + + I  + 
Sbjct: 424 IQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRST 483

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
             L  M  +G+  +  T   +IS         ++L +  Q FV
Sbjct: 484 KYLMLMKGKGLSADATTTELLISYF-SANKENSALQVFLQKFV 525



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 112/251 (44%), Gaps = 5/251 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++   ++ +I   + ++  M   GV      + SVI+ +  +     A+K+F  +   G
Sbjct: 224 LVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKG 283

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P V  Y+ ++         +    +   M  +G+  +V T++ L+   CK  R + A 
Sbjct: 284 LLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAI 343

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           +L   M      P+  +   I+  + K     EA  L      M     +  YN +++G+
Sbjct: 344 ELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGM 403

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   K  +A  L   +  +GI  +V+ Y+T+I  LC  G ++ +  +L +M   GC PN 
Sbjct: 404 CSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNE 463

Query: 236 HSFTSLLKGYL 246
            ++  L++G L
Sbjct: 464 FTYNVLVRGLL 474


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/597 (24%), Positives = 287/597 (48%), Gaps = 58/597 (9%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN---HILDALLAENRFSMINPI 87
           G + ++++++ R G    A+ +F R+ + G++P +  YN   H+   +     +  +  +
Sbjct: 173 GAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVP--WKEVVEL 230

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
            ++MK  G+ P+ +TYN L+    +      A ++  EM   G  PD V++ +++    K
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290

Query: 148 LGQVEEARELAM---RFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
             + +EA E+     R G   SV  YN+LI+   K+  +E+A  L  EM  +GI P+V+T
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVT 350

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+T+IS L   G ++ ++    +M   GC PN+ ++ +L+K + + G+  E   +++ + 
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELR 410

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             GF+P++V ++TL+     NG   E   V  +M++    P   TY +LI  +++ G   
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A QI+ RM+  G  P+V  Y  ++  L +   + QA  L  +M   +C P+  ++++ +
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530

Query: 383 KGLCGCGRVD------------------WAMKLLD-----------------QMKQYECL 407
                  R+D                  W +K L                  +++Q  C 
Sbjct: 531 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 590

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            +I   N ++    +   V++  ++++ +++  I L+  TYN+++H   R G   +   +
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L ++   G + D  ++N +IYAY ++G++  A +L   ++  G   PD+++Y   +    
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG-LKPDVVTYNIFVKSYV 709

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLV------------RSLFSNLGHLGPVY 572
           ++   +EA   ++ M+ +G  PN  T+N +V            +   SNL  L P Y
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGY 766



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 253/532 (47%), Gaps = 8/532 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  MK  GV+     + ++I+  RR  L ++A ++F  ++  G +P    +N +LD   
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   M+R G  P+V TYN L+ +  K+  ++ A  L  EM  KG  PD V
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349

Query: 137 SYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT++S + + G+++ A    +  +R G    +  YNALI       K  E   +  E+
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P+++T++T+++     G      G+  +M   G  P   ++ SL+  Y   G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ RM+  G  P+V  Y+ ++  L   G  ++A  +  +MEE  C P+  +YS+L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +  +A A  L     + + + S    P+      +V V  + N   +A     ++  + C
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589

Query: 372 PPNTVTFNTFIKGLCGCGR-VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             +    N  +  + G  R V    K+L  MK+     +  TYN L+    R+   ++  
Sbjct: 590 SLDINVLNAMV-SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++TEI+  G++ +  +YNT+++   R G + EA +L  +M   G K D +T+NI + +Y
Sbjct: 649 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSY 708

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
                   AI+L+  +   G   P+  +Y S++ G C +G + +A I++  +
Sbjct: 709 VSNSMFEEAIELVRYMVTQG-CKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 221/499 (44%), Gaps = 30/499 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++  G+    D    ++Q+M+  G   S   + S+I+SY + GL EQA+ +   +   G
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  Y  ++  L    +       Y  M R+G +PN+ TYN L+K      +     
Sbjct: 344 IKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  E+ + G  PD V++ T+++                 FG          NGL     
Sbjct: 404 AVFDELRSAGFVPDIVTWNTLLAV----------------FGQ---------NGLD---- 434

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             E   +  EM   G  P   TY ++ISS    G  + ++ I  +M   G  P++ ++ +
Sbjct: 435 -SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 493

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L     GGR  +A  L+  M      P+  +YS+L+H   +   +D+  ++S  +    
Sbjct: 494 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+      L+   +K  NL  A + +  +    CS ++     MV +  +N M  +  
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE 613

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++  M       +  T+N+ +      G  +    +L ++K     P+  +YN ++   
Sbjct: 614 KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY 673

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R  ++KEA  L +E++  G++ ++VTYN  +       M  EA +L+  M+ +G K + 
Sbjct: 674 GRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNE 733

Query: 481 ITFNIIIYAYCKQGKVNNA 499
            T+N I+  YC+ GK+ +A
Sbjct: 734 RTYNSIVEGYCRNGKLTDA 752



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 197/439 (44%), Gaps = 5/439 (1%)

Query: 139 TTIVSSICKLGQVEEAREL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
            T +  + + G++ EA  L     G     Y AL++   +  +  +A  +   MVD G+ 
Sbjct: 145 ATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQ 204

Query: 198 PNVITYSTIISSLCDVG-NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           P ++TY+ ++     +    +  + ++  M   G  P+ +++ +L+          EA+ 
Sbjct: 205 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 264

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +++ M   GF P+ V +++L+         DEA+ V  +ME   CPP+V TY++LI  + 
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G L  A  +   M   G  P+VV YT ++  L +      A    ++M    C PN  
Sbjct: 325 KDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+N  IK     G+    M + D+++    +P+I T+N LL    +     E   +  E+
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 444

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +K G      TY +++    R G+   A Q+  +M+  G   D  T+N ++ A  + G+ 
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 504

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN--FATW 554
             A +L   +    +  PD  SY+SLL    N+  + +       + +E I P+      
Sbjct: 505 EQAEKLFAEME-ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563

Query: 555 NVLVRSLFSNLGHLGPVYI 573
            VLV S  +NL      ++
Sbjct: 564 LVLVNSKVNNLAEAEKAFL 582



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 195/430 (45%), Gaps = 46/430 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+M+V+G+      + ++I+   R G  + A+  +  +   G KP +  YN ++    
Sbjct: 335 LKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHG 394

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMGNKGCAP 133
              +F  +  ++  ++  G  P++ T+N LL    +N   + V G +K   EM   G  P
Sbjct: 395 VRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFK---EMKKAGYIP 451

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLL 188
           +  +Y +++SS  + G  + A ++  R         VS YNA+++ L +  + E+A  L 
Sbjct: 452 ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 511

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN-------------I 235
            EM +R   P+  +YS+++ +  +   ++    +   ++     P+             +
Sbjct: 512 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKV 571

Query: 236 HSFTSLLKGYLLGGRTHEASDL-----------WNRMIR--EGFLP---------NVVAY 273
           ++     K +L   +   + D+            NRM+R  E  L          +   Y
Sbjct: 572 NNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATY 631

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++L+H     G  ++  ++  +++ +   P+  +Y+ +I  + + G +  AS++++ M  
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G  P+VV Y   VK    N+MF +A  L+  M  + C PN  T+N+ ++G C  G++  
Sbjct: 692 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 751

Query: 394 AMKLLDQMKQ 403
           A   +  + Q
Sbjct: 752 AKIFVSNLPQ 761



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 144/297 (48%), Gaps = 8/297 (2%)

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTYSALIDGFAKAGNLL 322
           EG L +    +T I  +   G + EA ++      ++ P P+   Y+AL+  F++AG   
Sbjct: 135 EGVLHHPRVLATAIRVMARAGRLAEASALL-----DAAPGPDAGAYTALVSAFSRAGRFR 189

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM-FHQAHSLIEKMAFENCPPNTVTFNTF 381
            A  ++ RM+ +G  P +V Y  ++ V  +  + + +   L+  M      P+  T+NT 
Sbjct: 190 DAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTL 249

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I           A ++ D+MK     P+  T+N LLD   +  R  EA E++ E+E+ G 
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++VTYN+++    + G++ +A  L  +M ++G K D +T+  +I    + GK++ AI 
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIV 369

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             D +   G   P++ +Y +L+      G   E      ++ + G  P+  TWN L+
Sbjct: 370 EYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLL 425



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 84/155 (54%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+   G+   +  V+ +L  MK   ++ S   + S+++ Y R+G  E+   +   I+  G
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 658

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++ A   + +    + ++S MK  G++P+V TYNI +K+   N+  + A 
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 718

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +L+  M  +GC P+  +Y +IV   C+ G++ +A+
Sbjct: 719 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 250/525 (47%), Gaps = 14/525 (2%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILD-ALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
            +A  M   +R  GL   V+  N +L   L   + F+     +  M   G+ P+  ++  
Sbjct: 130 REATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGM---GVRPDARSFRA 186

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE-----ARELAMR 160
           L+   C+  R + A  LL  M  +G + D+ + T +V + C+ G+  +      R + M 
Sbjct: 187 LVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMG 246

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
               V  Y A ++GLCK   +++AF +L EMV +G+ PNV T++++I  LC +G  E + 
Sbjct: 247 NPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAF 306

Query: 221 GILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
            +  ++       PN+H++T ++ GY   G+   A  L  RM+ +G  PN   Y+TLI G
Sbjct: 307 RLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDG 366

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C  GS D A  +  +M+     PN+ TY+A+I GF K G +  A ++     S G  P+
Sbjct: 367 HCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPD 426

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            V YT ++   C+      A  L  +MA  +C P+  T+ T I   C   +++ + +L D
Sbjct: 427 KVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFD 486

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +      +P   TY  ++ G  RV +   A ++   + + G   + +TY  ++ G+C+  
Sbjct: 487 KCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKES 546

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            + EA  L   ML +      +T   + Y YC++ K   A+  LD    G +      + 
Sbjct: 547 RLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLD----GLDKRQQAHAA 602

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +L+  +     +  A ++L+ +L++    + AT+   + S + +
Sbjct: 603 DALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYES 647



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 180/395 (45%), Gaps = 6/395 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL  M  EG S        V+ ++ R G       +F R+ E G  P V  Y   +D L 
Sbjct: 203 LLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLC 262

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDA 135
                     +   M   G++PNV+T+  L+  LCK    + A++L +++  +    P+ 
Sbjct: 263 KRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNV 322

Query: 136 VSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
            +YT ++   CK G++  A  L  R          + Y  LI+G C+    + AF L+ +
Sbjct: 323 HTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNK 382

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M   G  PN+ TY+ II   C  G ++ +  +L     +G  P+  ++T L+  +   G 
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGH 442

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              A DL+N+M      P++  Y+T+I   C    M+++  +  +       P   TY++
Sbjct: 443 ITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +I G+ + G    A +++ RM+ +GC P+ + Y  ++  LC+ +   +A +L E M  ++
Sbjct: 503 MIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKH 562

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
             P  VT  T     C   +   A+  LD + + +
Sbjct: 563 MVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQ 597



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 171/400 (42%), Gaps = 79/400 (19%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALL----AENRFSMINPIYSNMKRDGMEPN 99
           G  +QA  +   +   GLKP V  +  ++D L      E  F +   +   +K    +PN
Sbjct: 265 GYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKL---VKSSSYKPN 321

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM 159
           V TY +++   CK  ++  A  LL  M  +G AP+  +YTT++   C+ G  + A EL  
Sbjct: 322 VHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMN 381

Query: 160 R-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +     F   +  YNA+I G CK+ KI++A+ +L     +G+ P+ +TY+ +I+  C  G
Sbjct: 382 KMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQG 441

Query: 215 NVETSLGILGQMFVRGCNPNI-----------------------------------HSFT 239
           ++  +L +  QM    C+P+I                                    ++T
Sbjct: 442 HITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYT 501

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EE 298
           S++ GY   G++  A  ++ RM++ G LP+ + Y  LI GLC    ++EA ++   M ++
Sbjct: 502 SMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDK 561

Query: 299 NSCPPNVT-------------------------------TYSALIDGFAKAGNLLGASQI 327
           +  P +VT                                  AL+   +   NL  AS  
Sbjct: 562 HMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADALVRKLSAVDNLDAASLF 621

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
              ++    + +   YT  +    ++N +  A  + EK++
Sbjct: 622 LKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKIS 661



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 67/151 (44%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K +I     +L+    +G+   +  +  +I  + + G    AL +F ++ E    P + 
Sbjct: 404 KKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDID 463

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  I+     + +      ++      G+ P   TY  ++   C+  +   A K+   M
Sbjct: 464 TYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERM 523

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
              GC PD ++Y  ++S +CK  ++EEAR L
Sbjct: 524 VQHGCLPDPITYGALISGLCKESRLEEARAL 554



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G+  ++  + S+I  Y RVG +  ALK+F R+ + G  P    Y  ++  L  E+R    
Sbjct: 492 GLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEA 551

Query: 85  NPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL--VEMGNKGCAPDAV 136
             ++  M    M P   T   L    C+ ++   A   L  ++   +  A DA+
Sbjct: 552 RALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDKRQQAHAADAL 605


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 241/480 (50%), Gaps = 8/480 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++ SY R G    A+++   +++ G  P + I N  ++ L+   R          M+
Sbjct: 166 FAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMR 225

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R G++P+V TYN L+K LC   R+  A +++  M   GC PD +SY T++S +CK  +V 
Sbjct: 226 RVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVA 285

Query: 153 EAREL--AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E   L   MR  +G+      YN LI+GL K    +EA   L E   +    + + YS I
Sbjct: 286 EVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAI 345

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           + S C  G +  +  I+G+M  +GC P++ ++++++ G+   G   +A  +   M + G 
Sbjct: 346 VHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGC 405

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN V ++ L++GLC  G   EA  +  + EE    P+  TYS ++ GF + G L+ +  
Sbjct: 406 KPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCD 465

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +  +M+  G  P  V    ++  LC+     +A   +E+   + C  N V F T I G  
Sbjct: 466 VVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFS 525

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G ++ A+ LLD M      P++ TY  ++D L R  ++KEA  LV ++   G+    V
Sbjct: 526 RQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPV 585

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY T++H  C  G V +   LL KML +     A  +N +I   C  GK++ A  LL ++
Sbjct: 586 TYRTVIHRYCEKGAVEDLLNLLDKMLTKQGFSSA--YNQVIEKLCAFGKLSEAYNLLSKV 643



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 250/558 (44%), Gaps = 49/558 (8%)

Query: 53  FYRI--REFGLKPTVKIYNHILDALLAENRF-SMINPIYSNMKRDGMEPNVFTYNILLKA 109
           F+R   R++  +   ++++ +L ALL+  R       +   M R G+      +  L+ +
Sbjct: 114 FFRWADRQWKYRHAPEVFDEML-ALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLMLS 172

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSG 164
             +  ++  A ++L  M   GCAPD       V+ +   G+V++A E A R         
Sbjct: 173 YSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPD 232

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V  YN LI GLC   +I EA  ++  M+  G  P+ I+Y T++S LC    V     +L 
Sbjct: 233 VVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLE 292

Query: 225 QMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
           +M    G  P+  ++  L+ G    G   EA         + F  + V YS ++H  C N
Sbjct: 293 RMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLN 352

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G M EA  +  +M    C P+V TYSA++DGF + G L  A ++   M  NGC PN V +
Sbjct: 353 GRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTH 412

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           T ++  LC+     +A  L+ K   E   P+ +T++  + G    G++  +  ++ QM Q
Sbjct: 413 TALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQ 472

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC------- 456
               P     N L+  L +  +   A + + + +  G  +N+V + T++HG         
Sbjct: 473 KGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLES 532

Query: 457 ----------------------------RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
                                       R G + EA  L+ KML  G     +T+  +I+
Sbjct: 533 ALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIH 592

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            YC++G V + + LLD++     ++    +Y  ++  +C  G + EA+  L K+L     
Sbjct: 593 RYCEKGAVEDLLNLLDKMLTKQGFSS---AYNQVIEKLCAFGKLSEAYNLLSKVLRSASK 649

Query: 549 PNFATWNVLVRSLFSNLG 566
            +  T ++L+ S F N G
Sbjct: 650 RDAQTCHILMDS-FLNRG 666



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 230/497 (46%), Gaps = 43/497 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +LQ M+ +G +    +    +N     G  ++AL+   R+R  G+ P V  YN ++  L 
Sbjct: 185 VLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTYNCLIKGLC 244

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDA 135
              R      +  +M ++G  P+  +Y  ++  LCK  RV   + LL  M N  G  PD 
Sbjct: 245 GARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQ 304

Query: 136 VSYTTIVSSICKLGQVEEA----REL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++Y  ++  + K G  +EA    RE    RF      Y+A+++  C   ++ EA  ++ E
Sbjct: 305 ITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGE 364

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+ +G  P+V+TYS ++   C +G ++ +  ++  M+  GC PN  + T+LL G    G+
Sbjct: 365 MISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGK 424

Query: 251 THEASDLWNR-----------------------------------MIREGFLPNVVAYST 275
           + EA +L N+                                   M+++GF P  V  + 
Sbjct: 425 SSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINL 484

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LIH LC       A     Q +   C  NV  ++ +I GF++ G+L  A  + + M    
Sbjct: 485 LIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTN 544

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P+VV YT +V  L +     +A +L+EKM      P  VT+ T I   C  G V+  +
Sbjct: 545 RHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLL 604

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            LLD+M   +     + YN++++ L    ++ EA+ L++++ +   + +  T + ++   
Sbjct: 605 NLLDKMLTKQGFS--SAYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDSF 662

Query: 456 CRAGMVVEAFQLLGKML 472
              G+ ++++ +  +M 
Sbjct: 663 LNRGLPLQSYNVACRMF 679



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/379 (21%), Positives = 166/379 (43%), Gaps = 40/379 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +    D     L++ + +     +  + ++++S+   G   +A ++   +   G
Sbjct: 310 LIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKG 369

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  Y+ ++D             +  +M ++G +PN  T+  LL  LCK  +   A+
Sbjct: 370 CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAW 429

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR------FGSGVSVYNALING 174
           +LL +   +   P  ++Y+ I+    + G++ E+ ++ M+      F + V + N LI+ 
Sbjct: 430 ELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEI-NLLIHA 488

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCKE K   A   + +   +G   NV+ ++T+I      G++E++L +L  M++   +P+
Sbjct: 489 LCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPD 548

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI----------------- 277
           + ++T ++      G+  EA+ L  +M+  G LP  V Y T+I                 
Sbjct: 549 VVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLD 608

Query: 278 ----------------HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
                             LC+ G + EA ++  ++  ++   +  T   L+D F   G  
Sbjct: 609 KMLTKQGFSSAYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDSFLNRGLP 668

Query: 322 LGASQIWNRMISNGCSPNV 340
           L +  +  RM      P++
Sbjct: 669 LQSYNVACRMFQRNLIPDL 687


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/557 (28%), Positives = 267/557 (47%), Gaps = 8/557 (1%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           GVF ++ + +  +G+ E+A + F R+  F + P  +  N  L  L    +  + N  + +
Sbjct: 183 GVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRD 242

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+  +VFTYNI++  +CK   +  A  L  +M   G  PD V+Y +++    KLG 
Sbjct: 243 MVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGL 302

Query: 151 VEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           ++E+  L            V  YNALIN  CK  ++ +AF  L EM + G+ PNV+TYST
Sbjct: 303 LDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYST 362

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I +LC    ++ ++  L  M   G +PN  ++TSL+      G   +A  L + M++  
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              NVV Y+TL+ GLC  G M EA  +   M +    PN+ TY+AL+ G  K   +  A 
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENAL 482

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++   +      P+++ Y  ++  LC  N   +   ++ +M       N+V +   +   
Sbjct: 483 ELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAY 542

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+   A+ LL +M        I T+  L+DGL +   V+EA +    +    +Q N 
Sbjct: 543 FKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNN 602

Query: 446 VTYNT-ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           V   T ++ G+C+   +  A +L  +M  +    D I +  +I    K      A+ +  
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           R+   G    D+ +YTSL+WG+     +Q+A ++L +M+ +GI P+      L+R  +  
Sbjct: 663 RMSELG-MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYE- 720

Query: 565 LGHLGPVYILDDIMANK 581
           LG +     L D +  K
Sbjct: 721 LGSIDEAIELHDELLKK 737



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/535 (24%), Positives = 236/535 (44%), Gaps = 34/535 (6%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F+  + S RR+       ++ +  R   + P   +++ +    +           +S M 
Sbjct: 151 FLKELISSRRILPGFDVFEVLWSTRNVCV-PGFGVFDALFSVFIELGMLEEAGQCFSRMT 209

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           R  + P   + N  L  L K  + D + K   +M   G A                    
Sbjct: 210 RFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIA-------------------- 249

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                       V  YN +I  +CKE  +  A  L  +M   G+ P+++TY+++I     
Sbjct: 250 ----------QSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGK 299

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           +G ++ S  +  +M   GC P++ ++ +L+  +    +  +A    + M   G  PNVV 
Sbjct: 300 LGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVT 359

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YSTLI  LC    + +A+     M      PN  TY++LID   KAG L  A ++ + M+
Sbjct: 360 YSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                 NVV YT ++  LC+     +A  L   M      PN  T+   + G     RV+
Sbjct: 420 QVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVE 479

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A++LL ++K+ +  P++  Y  ++ GL   N+++E   +++E++ CGI+ N V Y   +
Sbjct: 480 NALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRM 539

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
               + G  VEA  LL +M   G ++  +TF ++I   CK+G V  AI    R+      
Sbjct: 540 DAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQ 599

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
             ++   T+L+ G+C +  ++ A     +M ++ + P+   +  L+     NL H
Sbjct: 600 PNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALID---GNLKH 651



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 221/479 (46%), Gaps = 41/479 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  + ++ ++   + L  QMK  G++     + S+I+ Y ++GL +++  +F  +++ G
Sbjct: 258 MIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVG 317

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P V  YN +++      +          MK  G++PNV TY+ L+ ALCK + +  A 
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
           K L++M   G +P+  +YT+++ + CK G + +A +LA     ++ G  V  Y  L++GL
Sbjct: 378 KFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGL 437

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYS------------------------------- 204
           CKE ++ EA  L   M+  G+ PN+ TY+                               
Sbjct: 438 CKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDL 497

Query: 205 ----TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
               TII  LC    +E    ++ +M   G   N   +T  +  Y   G+T EA +L   
Sbjct: 498 LLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQE 557

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAG 319
           M   G    +V +  LI GLC  G ++EA+    +M + N  P NV   +ALIDG  K  
Sbjct: 558 MCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNN 617

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            +  A ++++ M      P+ +AYT ++    ++  F +A ++  +M+      +   + 
Sbjct: 618 YIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYT 677

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           + + GL     V  A   L++M     +P+      LL     +  + EA EL  E+ K
Sbjct: 678 SLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLK 736


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/590 (26%), Positives = 274/590 (46%), Gaps = 44/590 (7%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V+ L  +M   GV   E V+   I+   ++  A++AL++  ++RE G +P    Y+ +
Sbjct: 203 DAVR-LFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSV 261

Query: 72  LDALLAENRFSMINPIYSNMK-RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +D L+   R      +   M    G + +V    +L+   C N  V  A  L  E+ + G
Sbjct: 262 VDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDG 321

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSVY--NALINGLCKEHKIEEAF 185
             P  V+Y  ++      G  +E  +L  +    G   S Y  N +I GL ++ + ++A 
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAI 381

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL  +VD G+ P+V TY  +I  LC    +  ++ +  +M   G  P+I ++ SLL GY
Sbjct: 382 GLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGY 440

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCP- 302
              GR  EA  L++ M  +GF PN V Y+TL+ G     + D A ++  +M +N  SC  
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500

Query: 303 --------------------------------PNVTTYSALIDGFAKAGNLLGASQIWNR 330
                                           P   TY+++I+GF KAG +  A  ++ +
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQ 560

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G +PN+V YT  +   C+ N    A  L+  +  +   P+   +N FI   C  G 
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A+  L  + +    P++T YN  + G   +  + EA +    + K  +  +   Y T
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTT 680

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G  + G V  A +L  +M+      D  TF  + +  C+ G ++ A +LLD +R   
Sbjct: 681 LIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMR-RL 739

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           + +P+I++Y  L+      G +QEAF    +ML+ G+ P+  T+++L R+
Sbjct: 740 DVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/603 (25%), Positives = 266/603 (44%), Gaps = 44/603 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M+ +G      ++  VI +  R G+   A+++F  +   G+KP  ++Y   +  L 
Sbjct: 172 LFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLC 231

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDA 135
                     +   M+  G EP   TY+ ++  L K  R+D A +L  +M    G   D 
Sbjct: 232 KLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDV 291

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCE 190
           V  T ++   C  G+V +A +L     S GV+     Y  LI G   E   +E + L  +
Sbjct: 292 VLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQ 351

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+++G+ P+   ++ +I  L      + ++G+L ++ V    P++ ++  L+       +
Sbjct: 352 MIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVDTGVPDVFTYGCLIHWLCKHQK 410

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            HEA +LW++M   G  P++V Y +L+ G C  G MDEA+ +  +M +   PPN  TY+ 
Sbjct: 411 LHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTT 470

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L+ G+ K      A  + N M  NG S     Y  ++  L   N   +   ++++   E 
Sbjct: 471 LMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEG 530

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P T+T+N+ I G    G +  A  +  QM++    PNI TY   +DG  R N    A 
Sbjct: 531 FVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAV 590

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG--------------------- 469
           +L+  + + GIQ +I  YN  +   C+ G +  A   L                      
Sbjct: 591 KLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGY 650

Query: 470 ---KMLIEGTKL-----------DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
              KM+ E +K            D   +  +I  + K G V  A++L   +       PD
Sbjct: 651 KNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMM-ANHVIPD 709

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
             ++T+L  G+C SG +  A   L  M    + PN  T+N+L+ +   + G L   + L 
Sbjct: 710 DKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRD-GKLQEAFQLH 768

Query: 576 DIM 578
           D M
Sbjct: 769 DEM 771



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 183/374 (48%), Gaps = 3/374 (0%)

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV RG+ P+  + + ++ +     +   +L +  +M  +GC  +   +  +++  + GG
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGG 199

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +A  L++ M   G  P+   Y+  I GLC     D A+ V  +M E    P   TYS
Sbjct: 200 MHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYS 259

Query: 310 ALIDGFAKAGNLLGASQIWNRM-ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           +++D   K   +  A ++ ++M ++ G   +VV  T ++   C N    +A  L +++  
Sbjct: 260 SVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVS 319

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P  VT+   IKG    G  D   KL  QM +   LP+   +N ++ GLLR  R K+
Sbjct: 320 DGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKD 379

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  L+  +   G+  ++ TY  ++H +C+   + EA  L  KM   G K   +T++ ++ 
Sbjct: 380 AIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLL 438

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            YC++G+++ A++L   +   G + P+ ++YT+L+ G         A+  L +M   G+ 
Sbjct: 439 GYCEKGRMDEALKLYSEMPDKG-FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497

Query: 549 PNFATWNVLVRSLF 562
               T+N+L+  L+
Sbjct: 498 CGDYTYNILINGLY 511



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 5/310 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K   D    LL +M+  GVSC +  +  +IN    V    +  +M  R    G  PT  
Sbjct: 477 KKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN I++  +          +Y  M++ G+ PN+ TY   +   C+ N  D A KLL+ +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYV 596

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARE---LAMRFG--SGVSVYNALINGLCKEHKI 181
              G  PD  +Y   + + CK G +  A     L ++ G    V+VYN+ + G      +
Sbjct: 597 RRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMM 656

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA      M+ + +  +   Y+T+I     VGNV  +L +  +M      P+  +FT+L
Sbjct: 657 AEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
             G    G    A  L + M R    PN+V Y+ LI+    +G + EA  +  +M  +  
Sbjct: 717 THGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGV 776

Query: 302 PPNVTTYSAL 311
            P+ TTY  L
Sbjct: 777 VPDDTTYDIL 786



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 206/455 (45%), Gaps = 46/455 (10%)

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSG----VSVYNALINGLCKE 178
            M  +G  PDA S T ++ +        +A  L   MR G G      +Y+ +I    + 
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMR-GKGCYADAKMYDVVIRACVRG 198

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
               +A  L  EM   G+ P+   Y+  IS LC + + + +L +LG+M            
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKM------------ 246

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                         EA          GF P  + YS+++  L     MDEA+ +  QM  
Sbjct: 247 -------------REA----------GFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLL 283

Query: 299 NSCPP-NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
            +    +V   + L+ G+   G +  A  +++ ++S+G +P  V Y  ++K      M  
Sbjct: 284 ATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTD 343

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           + + L  +M  +   P+T  FN  IKGL    R   A+ LL ++     +P++ TY  L+
Sbjct: 344 ETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVDTGVPDVFTYGCLI 402

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             L +  ++ EA  L  ++++ G++ +IVTY+++L G C  G + EA +L  +M  +G  
Sbjct: 403 HWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFP 462

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T+  ++  Y K+   +NA  LL+ +R  G    D  +Y  L+ G+     + E   
Sbjct: 463 PNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD-YTYNILINGLYMVNRVCEVDE 521

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            L++ L+EG  P   T+N ++   F   G +G  +
Sbjct: 522 MLKRFLSEGFVPTTMTYNSIING-FVKAGMMGSAF 555



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 162/373 (43%), Gaps = 30/373 (8%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           EK  +D    L  +M  +G   +E  + +++  Y +    + A  +   +R+ G+     
Sbjct: 442 EKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDY 501

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN +++ L   NR   ++ +      +G  P   TYN ++    K   +  A+ +  +M
Sbjct: 502 TYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQM 561

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
             KG  P+ V+YT+                               I+G C+ +  + A  
Sbjct: 562 RKKGITPNIVTYTS------------------------------FIDGYCRTNCCDLAVK 591

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           LL  +   GI P++  Y+  I + C  GN+  +L  L  +   G  P++  + S + GY 
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYK 651

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                 EAS  +  MI++  + +   Y+TLI G    G++  A+ +  +M  N   P+  
Sbjct: 652 NLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDK 711

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T++AL  G  ++G++ GA ++ + M     SPN+V Y  ++    ++    +A  L ++M
Sbjct: 712 TFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771

Query: 367 AFENCPPNTVTFN 379
                 P+  T++
Sbjct: 772 LSSGVVPDDTTYD 784



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 146/342 (42%), Gaps = 46/342 (13%)

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           ++RM+  G +P+  + + L+       S  +A+++  +M    C  +   Y  +I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G    A ++++ M   G  P+   Y   +  LC+     +A  ++ KM      P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQM------KQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           +++ +  L    R+D A++L DQM      K    L  +  +   L+G      V +A +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNG-----EVGKALD 312

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG---------------- 475
           L  E+   G+    VTY  ++ G    GM  E ++L  +M+ +G                
Sbjct: 313 LFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLL 372

Query: 476 -----------TKL-------DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
                       KL       D  T+  +I+  CK  K++ A+ L D+++  G   P I+
Sbjct: 373 RDKRWKDAIGLLKLVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG-VKPSIV 431

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           +Y SLL G C  G M EA     +M ++G  PN  T+  L++
Sbjct: 432 TYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMK 473



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 120/239 (50%), Gaps = 4/239 (1%)

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++RM++ G  P+  + T ++           A +L ++M  + C  +   ++  I+    
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G    A++L D+M      P+   Y   + GL ++     A +++ ++ + G +   +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           Y++++  + +   + EA +L  +ML+  G K+D +   ++++ YC  G+V  A+ L D +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGM-QEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              G   P  ++Y  L+ G C++ GM  E +   ++M+ +G+ P+   +N++++ L  +
Sbjct: 318 VSDG-VTPTNVTYGVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRD 374


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 265/543 (48%), Gaps = 45/543 (8%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PT+  YN ++D     +R  +   I   + ++G+ P+ F+Y+ L+    K+  VD A+ L
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCK 177
            +EM  +G  P  +   +I+  +CK+ ++++A  +  +   SG++     Y+ +I+GLCK
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
              +++A  +L +MV+ G  PN ITY+++I      G    S+ +  QM   G  P + +
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN-------------- 283
             S +      GRT+EA  +++ M+ +G  P++++YST++HG  +               
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250

Query: 284 -----------------------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
                                  G MD+A+ +   M+     P+  T++ +I    + G 
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 310

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT-FN 379
           L  A   +N M+  G  P+   Y C+++  C +    +A  LI +M  ++ PP  V  F+
Sbjct: 311 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 370

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + I  LC  GRV     ++D M Q    PN+ T+N L++G   V  ++EAF L+  +   
Sbjct: 371 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 430

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI+ N   Y T++ G C+ G + +A  +   ML +G K  ++ ++II++   +  +   A
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            ++   +   G     I +Y  +L G+C +    EA + L+K+    +  +  T+N+++ 
Sbjct: 491 KKMFHEMIESGT-TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 549

Query: 560 SLF 562
           ++F
Sbjct: 550 AMF 552



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/546 (27%), Positives = 262/546 (47%), Gaps = 43/546 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM   G   +   + S+I+ Y   G+  +++++F ++   G
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 183

Query: 61  LKPTVKIYNHILDALLAENR-------------------------------------FSM 83
           + PTV   N  + AL    R                                      + 
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           ++ I++ M   G+ PN   +NIL+ A  +   +D A  +  +M NKG  PD V++ T++S
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 303

Query: 144 SICKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S+C++G++++A  +       GV    +VY  LI G C   ++ +A  L+ EM+++ I P
Sbjct: 304 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 363

Query: 199 NVITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
             + Y S+II++LC  G V     I+  M   G  PN+ +F SL++GY L G   EA  L
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 423

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + M   G  PN   Y TL+ G C NG +D+A++V   M      P    YS ++ G  +
Sbjct: 424 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 483

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A     A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +T
Sbjct: 484 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 543

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           FN  I  +   GR   A +L D +  Y  +PNI TY+ ++  L++    +EA  L   +E
Sbjct: 544 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           K G   +    N I+  +     V +A   L  +      L+A T +++   + ++GK  
Sbjct: 604 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 663

Query: 498 NAIQLL 503
             I+LL
Sbjct: 664 EHIKLL 669



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 258/541 (47%), Gaps = 21/541 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+I  + + G  ++A  +F  + E G+ P + I N I+  L           I   M   
Sbjct: 53  SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 112

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P++FTY++++  LCK+  +D A ++L +M   G  P++++Y +++      G   E+
Sbjct: 113 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 172

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII-- 207
             +  +  S      V   N+ I+ L K  +  EA  +   MV +G  P++I+YST++  
Sbjct: 173 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 232

Query: 208 ------SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
                 S L DV N      I   M  +G  PN H F  L+  Y   G   +A  ++  M
Sbjct: 233 YATATDSCLADVHN------IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 286

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G +P+ V ++T+I  LC  G +D+A+     M +   PP+   Y  LI G    G L
Sbjct: 287 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 346

Query: 322 LGASQIWNRMISNGCSPNVVAY-TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           + A ++ + M++    P  V Y + ++  LC+     +   +++ M      PN VTFN+
Sbjct: 347 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 406

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            ++G C  G ++ A  LLD M      PN   Y  L+DG  +  R+ +A  +  ++   G
Sbjct: 407 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 466

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++   V Y+ ILHG+ +A     A ++  +M+  GT +   T+ +++   C+    + A 
Sbjct: 467 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 526

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            LL+++        DII++  ++  +   G  QEA      +   G+ PN  T+++++ +
Sbjct: 527 MLLEKLFAMN-VKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 585

Query: 561 L 561
           L
Sbjct: 586 L 586



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 141/282 (50%), Gaps = 5/282 (1%)

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           PP + TY+ LID + +         I  R++ NG  P+  +Y+ ++    ++    +AH 
Sbjct: 11  PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHC 69

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M  +   P  +  N+ IK LC    +D A  ++ +M      P++ TY+ ++DGL 
Sbjct: 70  LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 129

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   + +A  ++ ++ + G + N +TYN+++HG   +GM  E+ ++  +M   G      
Sbjct: 130 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 189

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY--L 539
             N  I+A  K G+ N A  + D +   G   PDIISY+++L G   +     A ++   
Sbjct: 190 NCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHNIF 248

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             ML +GI PN   +N+L+ + ++  G +    ++ + M NK
Sbjct: 249 NLMLTKGIAPNKHVFNILINA-YARCGMMDKAMLIFEDMQNK 289


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 222/418 (53%), Gaps = 5/418 (1%)

Query: 98   PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
            P++  +  +L A+ K N+ D    L  +M N G + D  S+T ++   C+  +   A   
Sbjct: 613  PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 155  --RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
              + + + F   +    +L+NG C+ ++ +EA  L+  M + G++PNV+ Y+T+I+ LC 
Sbjct: 673  LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 213  VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              ++  +L I   M  +G   +  ++ +L+ G    GR  +A+ L   M++    PNV+ 
Sbjct: 733  NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792

Query: 273  YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            ++ LI      G++ EA ++  +M   S  PN+ TY++LI+GF   G L  A  +++ M+
Sbjct: 793  FTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMV 852

Query: 333  SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            S GC P+VV Y  ++   C++        L  +M  +    +  T+NT I G C  G+++
Sbjct: 853  SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLN 912

Query: 393  WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             A K+ ++M      P+I TYN LLD L    ++++A  +V +++K  + ++I+TYN I+
Sbjct: 913  VAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972

Query: 453  HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
             G+CR   V EA+ L   +  +G KLDAI +  +I   C+ G    A +L  R++  G
Sbjct: 973  QGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 225/465 (48%), Gaps = 31/465 (6%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E AL +F  + +    P+V  +  +L A+    R+  +      M+  G+  +++++ IL
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +   C+ +R+  A  +L +M   G  P  V+                       FGS   
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVT-----------------------FGS--- 140

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
               L++G C  ++I +AF L+  MV  G +PNV+ Y+T+I  LC  G+V  +L +L +M
Sbjct: 141 ----LLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM 196

Query: 227 FVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
             +G    ++ ++ +LL G    G   +A+ +   M +    P+V  ++ LI      G+
Sbjct: 197 EKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGN 256

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +DEA  +  QM ++S  PN  TY++LI+G    G L  A + ++ M S GC PNVV Y  
Sbjct: 257 LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNT 316

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           ++   C++        L ++M  E    +T T+NT I G C  G++  A  +   M    
Sbjct: 317 LINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
             P+I T+  LL GL     +  A     ++      L IV YN ++HG+C+A  V EA+
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAW 436

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L  ++ +EG K DA T+ I+I   CK G    A +L  R++  G
Sbjct: 437 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 229/465 (49%), Gaps = 36/465 (7%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
           R + A  L +EM      P  V +T ++++I  L                          
Sbjct: 45  RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANL-------------------------- 78

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
                + E   +   +M   GI  ++ +++ +I   C    +  +L ILG+M   G +P+
Sbjct: 79  ----RRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPS 134

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +F SLL G+ L  R H+A  L   M++ G+ PNVV Y+TLI  LC NG ++ A+ +  
Sbjct: 135 IVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLN 194

Query: 295 QMEEN-SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           +ME+      ++ TY+ L+ G   +G    A++I   M     +P+V  +T ++    + 
Sbjct: 195 EMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQ 254

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  L ++M   +  PNTVT+N+ I GLC  GR+  A K  D M    C PN+ TY
Sbjct: 255 GNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTY 314

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N L++G  +  RV++  +L   + + G+  +  TYNT++HG C+ G +  A  +   M+ 
Sbjct: 315 NTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVS 374

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
            G   D IT  I+++  C  G++ +A+   + +R G ++   I++Y  ++ G+C +  ++
Sbjct: 375 CGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKY-LGIVAYNIMIHGLCKADKVE 433

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           EA+    ++  EG+ P+  T+ +++  L  N    GP    D++ 
Sbjct: 434 EAWELFCRLPVEGVKPDARTYTIMILGLCKN----GPRREADELF 474



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 223/466 (47%), Gaps = 65/466 (13%)

Query: 10   EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            + D V YL  +M+  G+S     F  +I+ + R      AL +  ++ + G +P++    
Sbjct: 630  KFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLG 689

Query: 70   HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
             +L+     NRF     +  +M   G+EPNV  YN ++  LCKN  ++ A ++   M  K
Sbjct: 690  SLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK 749

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            G   DAV+Y                              N LI+GLC   +  +A  LL 
Sbjct: 750  GIVADAVTY------------------------------NTLISGLCNSGRWTDAARLLR 779

Query: 190  EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            +MV R IDPNVI ++ +I +    GN+  +  +  +M  R  +PNI ++ SL+ G+ + G
Sbjct: 780  DMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQG 839

Query: 250  RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
            R  +A  +++ M+ +G  P+VV Y+TLI G C +  +++ + +  +M       +  TY+
Sbjct: 840  RLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYN 899

Query: 310  ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
             LI G+ +AG L  A +++NRM+  G  P++V Y  ++  LC N    +A  ++E +   
Sbjct: 900  TLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKN 959

Query: 370  NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
                + +T+N  I+G+C                                   R ++VKEA
Sbjct: 960  QMDVDIITYNIIIQGMC-----------------------------------RNDKVKEA 984

Query: 430  FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            + L   + + G++L+ + Y T++ G+CR G+  EA +L  +M  +G
Sbjct: 985  WCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 226/456 (49%), Gaps = 6/456 (1%)

Query: 115  RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYN 169
            + D A+ L  EM      P  V +T ++++I K+ + +    L  +  + G+S     + 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 170  ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
             LI+  C+  +   A  LL +M+  G  P+++T  ++++  C     + ++ ++  M   
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 230  GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
            G  PN+  + +++ G       + A +++  M ++G + + V Y+TLI GLC++G   +A
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 290  VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
              +   M +    PNV  ++ALID F K GNLL A  ++  MI     PN++ Y  ++  
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 350  LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
             C       A  + + M  + C P+ VT+NT I G C   RV+  MKL  +M     + +
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 410  ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              TYN L+ G  +  ++  A ++   +  CG+  +IVTYN +L  +C  G + +A  ++ 
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 470  KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
             +      +D IT+NIII   C+  KV  A  L   +   G    D I+Y +++ G+C +
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG-VKLDAIAYITMISGLCRN 1013

Query: 530  GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
            G  +EA     +M  +G  P+   ++  +R  +++L
Sbjct: 1014 GLRREADKLCTRMKEDGFMPSERIYDETLRDHYTSL 1049



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 194/398 (48%), Gaps = 6/398 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + V Y  QQM++ G+S     F  +I+ + R      AL +  ++ + G  P++  +  +
Sbjct: 82  ETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSL 141

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG- 130
           L      NR      + ++M + G EPNV  YN L+  LCKN  V+ A +LL EM  KG 
Sbjct: 142 LHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGR 201

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAF 185
            A D V+Y T+++ +C  G+  +A  +       R    V  + ALI+   K+  ++EA 
Sbjct: 202 LAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQ 261

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L  +M+   I PN +TY+++I+ LC  G +  +      M  +GC PN+ ++ +L+ G+
Sbjct: 262 ELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGF 321

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
               R  +   L+ RM REG + +   Y+TLIHG C  G +  A  +   M      P++
Sbjct: 322 CKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDI 381

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T+  L+ G    G +  A   +N M S      +VAY  M+  LC+ +   +A  L  +
Sbjct: 382 ITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCR 441

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           +  E   P+  T+   I GLC  G    A +L  +MK+
Sbjct: 442 LPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 137/577 (23%), Positives = 270/577 (46%), Gaps = 33/577 (5%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           DG++ L Q+M  EG+      + ++I+ Y +VG    A  +F  +   G+ P +  +  +
Sbjct: 329 DGMK-LFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L  L            +++M+       +  YNI++  LCK ++V+ A++L   +  +G 
Sbjct: 388 LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGV 447

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH----KIEEAFWL 187
            PDA +YT ++  +CK G   EA EL  R      +  A  +G   EH    ++     +
Sbjct: 448 KPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE-DGHLGEHGTNNQVSLGTII 506

Query: 188 LCEMVDRGIDPNVITY-----STIISSLCDVGNVETSLGILG------QMFVRGCNPNIH 236
           +C    R I  +   Y     +T+ SSL  +  + +S  + G       +  RG NP   
Sbjct: 507 ICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESR 566

Query: 237 SFTSL---------------LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           SF+                 L+  L   +  +A  L+  M++   +P++V ++ ++  + 
Sbjct: 567 SFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIA 626

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
                D  + + ++ME      ++ +++ LI  F +      A  +  +M+  G  P++V
Sbjct: 627 KMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIV 686

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
               ++   CQ N F +A SL++ MA     PN V +NT I GLC    ++ A+++   M
Sbjct: 687 TLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGM 746

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           ++   + +  TYN L+ GL    R  +A  L+ ++ K  I  N++ +  ++    + G +
Sbjct: 747 EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 806

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
           +EA  L  +M+      + +T+N +I  +C QG++ +A  + D +   G + PD+++Y +
Sbjct: 807 LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCF-PDVVTYNT 865

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           L+ G C S  +++      +M ++G+  +  T+N L+
Sbjct: 866 LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLI 902



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/599 (22%), Positives = 270/599 (45%), Gaps = 39/599 (6%)

Query: 17  LLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL +M+ +G   ++ V + +++      G   QA ++   + +  + P V  +  ++DA 
Sbjct: 192 LLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAF 251

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           + +        +Y  M +  + PN  TYN L+  LC + R+  A K    M +KGC P+ 
Sbjct: 252 VKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNV 311

Query: 136 VSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           V+Y T+++  CK  +VE+  +L  R +  G+      YN LI+G C+  K+  A  +   
Sbjct: 312 VTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSW 371

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV  G+ P++IT+  ++  LC  G + +++     M        I ++  ++ G     +
Sbjct: 372 MVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADK 431

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPP----- 303
             EA +L+ R+  EG  P+   Y+ +I GLC NG   EA  +  +M+E+   C       
Sbjct: 432 VEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHL 491

Query: 304 ------NVTTYSALI------DGFAKAGNL---LGASQIWNRMISNGCSPNVVAYTCMVK 348
                 N  +   +I          ++G+L      + +W+ ++  G  P  +A +  VK
Sbjct: 492 GEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLV--GLIP--IASSSSVK 547

Query: 349 VLCQNN-MFHQAHSLIEKMAFENCP-----PNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
              + + +  +  +  E  +F          +   +   ++    C + D A  L  +M 
Sbjct: 548 GFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEML 607

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           Q   +P+I  +  +L  + ++N+      L  ++E  GI  ++ ++  ++H  CR     
Sbjct: 608 QSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFS 667

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            A  LLGKM+  G +   +T   ++  +C+  +   A+ L+D +   G   P+++ Y ++
Sbjct: 668 LALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG-LEPNVVIYNTV 726

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + G+C +  +  A      M  +GI  +  T+N L+  L ++        +L D++  K
Sbjct: 727 INGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/553 (22%), Positives = 247/553 (44%), Gaps = 50/553 (9%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++  L   ++      ++  +  +G++P+  TY I++  LCKN     A +L   M 
Sbjct: 419 YNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK 478

Query: 128 NKGCAPDA-------------VSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALI-- 172
             G    A             VS  TI+    +   + E+ +L   + S  +++++L+  
Sbjct: 479 EDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYY-SDTTLWSSLVGL 537

Query: 173 ---------NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI---------------IS 208
                     G  + H +         +++RG +P   ++S                 + 
Sbjct: 538 IPIASSSSVKGFVRRHLL---------LLERGNNPESRSFSGASHHHHHHHHHHYRERLR 588

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           S       + + G+  +M      P+I  FT +L       +      L+++M   G   
Sbjct: 589 SELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISH 648

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           ++ +++ LIH  C       A+++  +M +    P++ T  +L++GF +      A  + 
Sbjct: 649 DLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLV 708

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + M   G  PNVV Y  ++  LC+N   + A  +   M  +    + VT+NT I GLC  
Sbjct: 709 DSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS 768

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           GR   A +LL  M + +  PN+  +  L+D  ++   + EA  L  E+ +  +  NI+TY
Sbjct: 769 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N++++G C  G + +A  +   M+ +G   D +T+N +I  +CK  +V + ++L   +  
Sbjct: 829 NSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTH 888

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            G    D  +Y +L+ G C +G +  A     +M++ G+ P+  T+N+L+  L +N    
Sbjct: 889 QGLVG-DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIE 947

Query: 569 GPVYILDDIMANK 581
             + +++D+  N+
Sbjct: 948 KALVMVEDLQKNQ 960



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 162/319 (50%), Gaps = 2/319 (0%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L  G+L   R  +A DL+  M++   LP+VV ++ L+  + +    +  +  S QME   
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              ++ +++ LI  F +   L  A  I  +M+  G  P++V +  ++   C  N  H A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLDG 419
           SL+  M      PN V +NT I  LC  G V+ A++LL++M K+     ++ TYN LL G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L      ++A  ++ ++ K  I  ++ T+  ++    + G + EA +L  +ML      +
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +T+N +I   C  G++ +A +  D +   G + P++++Y +L+ G C S  +++     
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCF-PNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 540 QKMLNEGICPNFATWNVLV 558
           Q+M  EG+  +  T+N L+
Sbjct: 335 QRMYREGLVGDTFTYNTLI 353



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 143/294 (48%), Gaps = 5/294 (1%)

Query: 21   MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
            M+ +G+      + ++I+     G    A ++   + +  + P V  +  ++D  + E  
Sbjct: 746  MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 805

Query: 81   FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                  +Y  M R  + PN+ TYN L+   C   R+  A  +   M +KGC PD V+Y T
Sbjct: 806  LLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNT 865

Query: 141  IVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
            +++  CK  +VE+  +L               YN LI+G C+  K+  A  +   MVD G
Sbjct: 866  LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925

Query: 196  IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
            + P+++TY+ ++  LC+ G +E +L ++  +     + +I ++  +++G     +  EA 
Sbjct: 926  VPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAW 985

Query: 256  DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
             L+  + R+G   + +AY T+I GLC NG   EA  +  +M+E+   P+   Y 
Sbjct: 986  CLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/619 (24%), Positives = 294/619 (47%), Gaps = 43/619 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ +I G   +  +M +  +S +   +  +I+ +   G  EQAL++   +   G
Sbjct: 86  LINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKG 145

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+P    Y  +L  L    +F +   +   ++  GM      Y  ++  LCK+  +D + 
Sbjct: 146 LRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESL 205

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
           +LL  M   G +PD ++++ +++  CK G+++ A+E+  + F +G++    +Y  LI   
Sbjct: 206 QLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNS 265

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+  I EAF     M   G D +    + +ISSLC  G V  +   +  M      PN 
Sbjct: 266 CKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNS 325

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F  ++ GY + G   +A  +++ MI+ G  P+   Y +L+ GLC  G++ EA  + Y+
Sbjct: 326 ITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYK 385

Query: 296 MEE---------------NSCP--------------------PNVTTYSALIDGFAKAGN 320
           +                  +C                     P+  TY+ ++ G ++ G 
Sbjct: 386 LHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGK 445

Query: 321 LLGASQIWNRMISNGC-SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           ++ A   + + ++ G  SPN V YT +   L +    + A  + E+M  +   P+T+  N
Sbjct: 446 MVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAIN 505

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             + G    G+++   KL  +M+     P++ TYN LL G  +   + +  +    + + 
Sbjct: 506 AVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRM 565

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI  + +T ++I+ G+C++GM+   F++L KM++E T +D +T N++I   C+  K+  A
Sbjct: 566 GISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKA 625

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
             LL+ I+      PD+ +Y ++  G+  +  ++E+ + L  ML  GI P    +  L+ 
Sbjct: 626 FDLLN-IKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLIN 684

Query: 560 SLFSNLGHLGPVYILDDIM 578
            +   +G +   + L D M
Sbjct: 685 GM-CRMGDIQGAFRLKDEM 702



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 231/480 (48%), Gaps = 11/480 (2%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+  G  P + TYN +L   CK  R   A  L+  M +KG   D  +Y  ++  +CK  +
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 151 VEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +   L   MR          YN LINGL KE KI  A  +  EM+   + PN +TY+ 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I   CD GN E +L +L  M  +G  P+  ++ +LL G     +   A  L  R+   G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
            +    AY+ +I GLC +G +DE++ +   M ++   P++ T+S LI+GF KAG +  A 
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++  +M   G +PN V Y  ++   C+     +A      M       +    N  I  L
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSL 300

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  GRV  A   +  M   +  PN  T++ +++G   +    +AF +  E+ K G   + 
Sbjct: 301 CRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSH 360

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
            TY ++L G+C+ G + EA +LL K+      +D   +N I+   CK+GK+++A+ L   
Sbjct: 361 FTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGE 420

Query: 506 IRGGGEWN--PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG-ICPNFATWNVLVRSLF 562
           +    ++N  PD  +Y  +L G+   G M  A ++ +K L  G + PN   +  L   LF
Sbjct: 421 MV---QFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLF 477



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 248/517 (47%), Gaps = 6/517 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G  PT+  YN IL+    + R+   + +   M+  G+E +V TYN+L+  LCKNNR    
Sbjct: 5   GYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKG 64

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALING 174
           Y LL +M  +  AP+  +Y T+++ + K  ++  A       L +        YN LI+G
Sbjct: 65  YLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDG 124

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            C     E+A  LL  M  +G+ P+ + Y  ++S L  +   + +  ++ ++ + G    
Sbjct: 125 HCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVG 184

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++T+++ G    G   E+  L + M ++G  P+++ +S LI+G C  G +  A  V  
Sbjct: 185 YRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVIC 244

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M +    PN   Y+ LI    K G++  A + +  M   G   +      ++  LC+  
Sbjct: 245 KMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAG 304

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A   +  M+  +  PN++TF+  I G    G    A  + D+M +    P+  TY 
Sbjct: 305 RVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYG 364

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            LL GL +   ++EA +L+ ++      ++   YNTIL   C+ G + +A  L G+M+  
Sbjct: 365 SLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQF 424

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
               D+ T+ II+    ++GK+  A+   ++    G  +P+ + YTSL  G+   G    
Sbjct: 425 NVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNA 484

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           A    ++M ++GI P+    N ++   +S +G +  V
Sbjct: 485 ASYIYEEMEHKGINPDTIAINAVLDG-YSRMGKMEKV 520



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 259/583 (44%), Gaps = 42/583 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M+ +G+      +  +I+   +   + +   +  ++R+  + P    YN +++ L+
Sbjct: 32  LIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNEFTYNTLINGLM 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E +      +++ M    + PN  TYNIL+   C     + A +LL  M  KG  PD V
Sbjct: 92  KERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVMEAKGLRPDEV 151

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++S + KL + + A+ L  R        G   Y A+I+GLCK   ++E+  LL  M
Sbjct: 152 NYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMM 211

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P++IT+S +I+  C  G ++ +  ++ +MF  G  PN   + +L+      G  
Sbjct: 212 FKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDI 271

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA   +  M R G   +    + LI  LC  G + EA      M      PN  T+  +
Sbjct: 272 TEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCI 331

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+G+   G+ L A  +++ MI  G  P+   Y  ++K LC+     +A  L+ K+     
Sbjct: 332 INGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPA 391

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT------------------- 412
             +T  +NT +   C  G++  A+ L  +M Q+  LP+  T                   
Sbjct: 392 AVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALL 451

Query: 413 -----------------YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                            Y  L DGL +V +   A  +  E+E  GI  + +  N +L G 
Sbjct: 452 FFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGY 511

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            R G + +  +L  KM          T+NI+++ Y K+  +    +  + +   G  +PD
Sbjct: 512 SRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMG-ISPD 570

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            ++  S++ G+C SG +   F  L+KM+ E    +  T N+L+
Sbjct: 571 KLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLI 613



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/644 (23%), Positives = 290/644 (45%), Gaps = 77/644 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L +   +D    LL  M  +G S     F  +IN + + G  + A ++  ++ + G
Sbjct: 191 MIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAG 250

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD--- 117
           L P   IY  ++     +   +     Y+ M R G + + F  N+L+ +LC+  RV    
Sbjct: 251 LAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAE 310

Query: 118 --------------------------------GAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                                            A+ +  EM   G  P   +Y +++  +
Sbjct: 311 DFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGL 370

Query: 146 CKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CK G + EA++L  +          ++YN +++  CK  K+ +A  L  EMV   + P+ 
Sbjct: 371 CKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDS 430

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWN 259
            TY+ I++ L   G +  +L    +   RG  +PN   +TSL  G    G+++ AS ++ 
Sbjct: 431 HTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYE 490

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M  +G  P+ +A + ++ G    G M++   +  +M+  S  P++ TY+ L+ G++K  
Sbjct: 491 EMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKK 550

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
           +LL  S+ +N M   G SP+ +    ++  LC++ M      +++KM  E+   + +T N
Sbjct: 551 DLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLN 610

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I   C   ++  A  LL+       +P++ TYN +  GL R + ++E+  L+ ++ + 
Sbjct: 611 MLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLER 670

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK---------------------- 477
           GI      Y ++++G+CR G +  AF+L  +M   G                        
Sbjct: 671 GITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEA 730

Query: 478 ---LDAI----------TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
              LD +          TF  +++  CK+ K++ A++L  ++   G    D+++Y  L+ 
Sbjct: 731 MLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYG-VKLDVVAYNVLIS 789

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
           G+C  G    AF   ++M   G+ PN  T+  L+ ++ +N G +
Sbjct: 790 GLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEV 833



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 1/145 (0%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I G   L  +M+  GVS  +    +++    + G  E+A+ +   + +  L PTV  + 
Sbjct: 691 DIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFT 750

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  L  + + S    +   M   G++ +V  YN+L+  LC +     A+ L  EM  +
Sbjct: 751 TLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKER 810

Query: 130 GCAPDAVSYTTIVSSI-CKLGQVEE 153
           G  P+  +Y T++ +I    G+VEE
Sbjct: 811 GLWPNTTTYCTLIDAISTNEGEVEE 835



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N I+   CK+G+   A  L+DR+   G    D+ +Y  L+  +C +    + ++ L+
Sbjct: 11  VTYNTILNWCCKKGRYKAASDLIDRMESKG-IEADVCTYNMLIDDLCKNNRSAKGYLLLK 69

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           KM    I PN  T+N L+  L       G   + ++++
Sbjct: 70  KMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEML 107


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 274/546 (50%), Gaps = 12/546 (2%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA-ENRFSMINP- 86
           S+ +F   +++Y   G    AL++F ++    LKP +   N +L  L+   + FS+ +  
Sbjct: 130 SKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAR 189

Query: 87  -IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSS 144
            ++ +M + G+  +V T+N+L+   C   +++ A  +L  M ++    PD V+Y TI+ +
Sbjct: 190 EVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKA 249

Query: 145 ICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           + K G++ + ++L +       V     YN L+ G CK   ++EAF ++  M    I P+
Sbjct: 250 MSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPD 309

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           + TY+ +I+ +C+ G++   L ++  M      P++ ++ +L+ G    G + EA  L  
Sbjct: 310 LCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLME 369

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAV-SVSYQMEENSCPPNVTTYSALIDGFAKA 318
           +M  +G  PN V ++  +  LC     +E    V   +E +   P++ TY  LI  + K 
Sbjct: 370 QMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKV 429

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+L GA ++   M   G   N +    ++  LC+     +AH+L++         + VT+
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTY 489

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            T I G     +V+ A ++ D+MK+ +  P +TT+N L+ GL    + + A E   E+ +
Sbjct: 490 GTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAE 549

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  +  T+N+I+ G C+ G V +AF+   + +    K D  T NI++   CK+G    
Sbjct: 550 SGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+   + +    E   D ++Y +++   C    ++EA+  L +M  + + P+  T+N ++
Sbjct: 610 ALNFFNTLI--TEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSII 667

Query: 559 RSLFSN 564
            SL  +
Sbjct: 668 TSLMED 673



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 148/544 (27%), Positives = 261/544 (47%), Gaps = 40/544 (7%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFGLKPTVKIYNHILDALLAENRFSM 83
           GVS     F  ++N Y   G  E AL M  R + EF + P    YN IL A+  + R S 
Sbjct: 199 GVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSD 258

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           +  +  +MKR+G+ PN  TYN L+   CK   +  A++++  M      PD  +Y  +++
Sbjct: 259 VKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILIN 318

Query: 144 SICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE-EAFWLLCEMVDRGID 197
            +C  G + E  EL     +++    V  YN LI+G C E  +  EA  L+ +M + G+ 
Sbjct: 319 GVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDG-CFELGLSLEAKKLMEQMENDGVK 377

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           PN +T++  +  LC     E     + ++  + G +P+I ++ +L+K YL  G    A +
Sbjct: 378 PNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +   M ++G   N +  +T++  LC    +DEA ++     +     +  TY  LI G+ 
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYF 497

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           +   +  A ++W+ M     +P V  +  ++  LC +     A    +++A     P+  
Sbjct: 498 REEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDC 557

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE----L 432
           TFN+ I G C  GRV+ A +  ++  ++   P+  T N LL+GL +    ++A      L
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           +TE E     ++ VTYNT++   C+   + EA+ LL +M  +  + D  T+N II +  +
Sbjct: 618 ITERE-----VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLME 672

Query: 493 QGKVNNAIQLLDRIRGG-----------GEWNP-----------DIISYTSLLWGICNSG 530
            GK++ A +LL +  G             E NP           + I+Y+ ++  +C+ G
Sbjct: 673 DGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRG 732

Query: 531 GMQE 534
            ++E
Sbjct: 733 RLKE 736



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 173/342 (50%), Gaps = 12/342 (3%)

Query: 232 NPNIHS--------FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC-- 281
           +PN+H         F   L  YL  G+ H A  ++ +MIR    PN++  +TL+ GL   
Sbjct: 120 HPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRY 179

Query: 282 -SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN-GCSPN 339
            S+ S+  A  V   M +     +V T++ L++G+   G L  A  +  RM+S    +P+
Sbjct: 180 PSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPD 239

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            V Y  ++K + +         L+  M      PN VT+N  + G C  G +  A ++++
Sbjct: 240 NVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            MKQ   LP++ TYN L++G+     ++E  EL+  ++   +Q ++VTYNT++ G    G
Sbjct: 300 LMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELG 359

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
           + +EA +L+ +M  +G K + +T NI +   CK+ K     + +  +     ++PDI++Y
Sbjct: 360 LSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTY 419

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +L+      G +  A   +++M  +GI  N  T N ++ +L
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 139/315 (44%), Gaps = 41/315 (13%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           +++ G S     + ++I +Y +VG    AL+M   + + G+K      N ILDA      
Sbjct: 407 VEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDA------ 460

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                                        LCK  +VD A+ LL     +G   D V+Y T
Sbjct: 461 -----------------------------LCKERKVDEAHNLLDSAHKRGYIVDEVTYGT 491

Query: 141 IVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           ++    +  +VE+A E+      ++    V+ +N+LI GLC   K E A     E+ + G
Sbjct: 492 LIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESG 551

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+  T+++II   C  G VE +     +       P+ ++   LL G    G T +A 
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           + +N +I E  + + V Y+T+I   C +  + EA  +  +MEE    P+  TY+++I   
Sbjct: 612 NFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSL 670

Query: 316 AKAGNLLGASQIWNR 330
            + G L  A ++  +
Sbjct: 671 MEDGKLSEADELLKK 685



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 17/298 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++ ++D    LL      G    E  + ++I  Y R    E+A +M+  ++   
Sbjct: 457 ILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIK 516

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV  +N ++  L    +  +    +  +   G+ P+  T+N ++   CK  RV+ A+
Sbjct: 517 ITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAF 576

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
           +   E       PD  +   +++ +CK G  E+A      L          YN +I+  C
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMISAFC 636

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K+ K++EA+ LL EM ++ ++P+  TY++II+SL + G +  +  +L +   +       
Sbjct: 637 KDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGK------- 689

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            F S+ +   L    + A+       +E      +AYS +I+ LCS G + E  S SY
Sbjct: 690 -FGSMKRNLHLETEKNPATS----ESKEELKTEAIAYSDVINELCSRGRLKEH-STSY 741


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 155/528 (29%), Positives = 257/528 (48%), Gaps = 9/528 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQM-KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I KL        VQ+LL +M K  G+   E +F+++I    R  +    +K+   +  +
Sbjct: 54  LIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRY 113

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIY-SNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           G  P++KI+N ILD L+ E+   +    Y   M   G++ + +TY IL+K LC  NR+  
Sbjct: 114 GKNPSLKIFNSILDVLVKED-IDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGE 172

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-YNALINGLCK 177
            +KLL  + ++G  P+ V Y T++ ++C  G+V  AR L         V +N LI G CK
Sbjct: 173 GFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCK 232

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           E    +A  LL +    G  P+V+T + ++  LC+VG V  ++ IL ++  +G   ++ +
Sbjct: 233 EDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVA 292

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
             +L+KG+   G+      L   M R+G LPN   Y+ LI G C +G ++ A+ +   M+
Sbjct: 293 HNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMK 352

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM--ISNGCSPNVVAYTCMVKVLCQNNM 355
            +    N  T+  LI G    G      +I   M      C  ++  Y  ++  L + NM
Sbjct: 353 TDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNM 412

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
            ++A   + KM  EN  P  V  +  I G C  G +  A ++ DQM     +P+   Y+ 
Sbjct: 413 LNEALEFLMKM--ENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDC 470

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  +   V+EA EL+ E+   G      T+N ++ G CR G    A +LL  M+  G
Sbjct: 471 LIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLLEDMVGRG 530

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
              D  +++ +I A C++     A  LL ++   G   PD + + SL 
Sbjct: 531 CVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENG-ITPDYLIWNSLF 577



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 263/563 (46%), Gaps = 57/563 (10%)

Query: 46  AEQALKMF-YRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD-GMEPNVFTY 103
           A QAL+ F +  +      +   Y  ++  LL   RF  +  +   M +  G+ P+   +
Sbjct: 28  APQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIF 87

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-- 161
             +++ L +   +    K+L  +   G  P    + +I+  +     V+E  +LA +F  
Sbjct: 88  LTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVL-----VKEDIDLARKFYR 142

Query: 162 ----GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
               G+G+      Y  L+ GLC  ++I E F LL  +  RG+ PNV+ Y+T++ +LC+ 
Sbjct: 143 KKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNN 202

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G V  +  ++ ++      PN  +F  L+ GY       +A  L  +    GF+P+VV  
Sbjct: 203 GKVGRARSLMNEI----KEPNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTV 258

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + ++  LC+ G + EAV +  ++E      +V  ++ LI GF K G +     +   M  
Sbjct: 259 TKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMER 318

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            GC PN   Y  ++   C++ M   A  +   M  +    N VTF+T IKGL   GR + 
Sbjct: 319 KGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTED 378

Query: 394 AMKLLDQMKQYE--CLPNITTYNELLDGLLRVNRVKEAFELVTEIE-------------- 437
             K+L+ M++    C  +I+ YN +L GL R N + EA E + ++E              
Sbjct: 379 GFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRIL 438

Query: 438 ------------KCGIQLN-------IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
                       +   Q+N        + Y+ ++HG C+ G V EA +L+ +M+  G   
Sbjct: 439 GFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFP 498

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
            A TFN +I  +C+ GK  +A++LL+ + G G   PD  SY+ L+  +C     Q+A   
Sbjct: 499 VASTFNALISGFCRLGKDGSALKLLEDMVGRG-CVPDTGSYSPLIDALCRKKSFQKAASL 557

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
           L +M+  GI P++  WN L   L
Sbjct: 558 LLQMVENGITPDYLIWNSLFHCL 580



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 154/328 (46%), Gaps = 6/328 (1%)

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           ++ +L+   L   R H    L + M +  G  P+   + T+I GL     + + + V   
Sbjct: 50  TYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDL 109

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P++  +++++D   K    L       +M+  G   +   Y  ++K LC  N 
Sbjct: 110 VTRYGKNPSLKIFNSILDVLVKEDIDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNR 169

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +   L++ +      PN V +NT +  LC  G+V  A  L++++K+    PN  T+N 
Sbjct: 170 IGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE----PNDVTFNV 225

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  + +   +A  L+ +    G   ++VT   ++  +C  G V EA ++L ++  +G
Sbjct: 226 LICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKG 285

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
             +D +  N +I  +CK GKV     LL  +   G   P+  +Y +L+ G C SG ++ A
Sbjct: 286 GVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCL-PNADTYNALISGFCESGMLESA 344

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFS 563
                 M  +GI  NF T++ L++ LFS
Sbjct: 345 LDMFNDMKTDGINCNFVTFDTLIKGLFS 372



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 143/319 (44%), Gaps = 9/319 (2%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           VG   +A+++  R+   G    V  +N ++       +  + + +   M+R G  PN  T
Sbjct: 268 VGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADT 327

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-------R 155
           YN L+   C++  ++ A  +  +M   G   + V++ T++  +   G+ E+         
Sbjct: 328 YNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELME 387

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           E     G  +S YN+++ GL +++ + EA   L +M    + P  +  S  I   C+ G 
Sbjct: 388 ETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKM--ENLFPRAVDRSLRILGFCEEGA 445

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ +  +  QM   G  P+   +  L+ G+   G   EA +L N M+  G+ P    ++ 
Sbjct: 446 IQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNA 505

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI G C  G    A+ +   M    C P+  +YS LID   +  +   A+ +  +M+ NG
Sbjct: 506 LISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENG 565

Query: 336 CSPNVVAYTCMVKVLCQNN 354
            +P+ + +  +   L Q  
Sbjct: 566 ITPDYLIWNSLFHCLSQQT 584



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 16/178 (8%)

Query: 392 DWAMKLLDQMKQYECLPNIT----TYNELLDGLLRVNRVKEAFELVTEIEKC-GIQLNIV 446
           +WA KL          PN T    TY  L+  LL   R      L+ E+ K  G+  +  
Sbjct: 36  EWASKL----------PNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDES 85

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            + TI+ G+ RA M+ +  ++L  +   G       FN I+    K+  ++ A +   + 
Sbjct: 86  IFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKE-DIDLARKFYRKK 144

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
             G     D  +Y  L+ G+C +  + E F  LQ + + G+ PN   +N L+ +L +N
Sbjct: 145 MMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNN 202


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 235/461 (50%), Gaps = 10/461 (2%)

Query: 45   LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTY 103
            +  QA+ +FY+I+    +P  + YN ++  L+ E ++  ++ +Y+ M  +G   P+  TY
Sbjct: 1164 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTY 1223

Query: 104  NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRF 161
            + L+ A CK  R D A +LL EM   G  P    YT +++   K      A  L   MR 
Sbjct: 1224 SALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH 1283

Query: 162  G---SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                  V  Y  LI GL K  +I+EA+   CEM   G  P+ +  + +I+ L   G ++ 
Sbjct: 1284 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDD 1343

Query: 219  SLGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            ++ +  +M    C P++ ++ +++K  +    R  E    + RM   G  P+   YS LI
Sbjct: 1344 AMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILI 1403

Query: 278  HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             G C    M++A+ +  +M+E   PP    Y +LID   KA     A +++  +  N  S
Sbjct: 1404 DGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGS 1463

Query: 338  PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
             +   Y  M+K L +      A ++ ++M    C P+   +N  + GL   G +D A+  
Sbjct: 1464 SSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALST 1523

Query: 398  LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            + +M+++ C+P+I +YN +L+GL +      A E+++ +++  ++ ++V+YNT+L  +  
Sbjct: 1524 MRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSH 1583

Query: 458  AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            AGM  EA +L+ +M   G + D IT++ I+ A    GKV++
Sbjct: 1584 AGMFEEASKLMKEMNTLGFEYDLITYSSILEAI---GKVDH 1621



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 224/463 (48%), Gaps = 8/463 (1%)

Query: 106  LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
            +++ L     V  A  +  ++  + C P A +Y +++  +   GQ E+  +L     +  
Sbjct: 1155 VVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 1214

Query: 164  ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                    Y+ALI+  CK  + + A  LL EM + G+ P    Y+ +I+      +   +
Sbjct: 1215 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 1274

Query: 220  LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
            L +  +M  + C P++ ++T L++G    GR  EA   +  M REG  P+ V  + +I+ 
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334

Query: 280  LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
            L   G +D+A+ +  +ME   C P+V TY+ +I    ++ +       W  RM  +G SP
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394

Query: 339  NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R D A +L 
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454

Query: 399  DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             ++K+     +   Y  ++  L +  R+ +A  +  E+ K G   ++  YN ++ G+ R 
Sbjct: 1455 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 1514

Query: 459  GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            GM+ EA   + +M   G   D  ++NII+    K G  + A+++L  ++      PD++S
Sbjct: 1515 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS-TVRPDVVS 1573

Query: 519  YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            Y ++L  + ++G  +EA   +++M   G   +  T++ ++ ++
Sbjct: 1574 YNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 1616



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 215/450 (47%), Gaps = 14/450 (3%)

Query: 87   IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSI 145
            I+  +K    +P    YN ++  L    + +  ++L  EM  +G C PD V+Y+ ++S+ 
Sbjct: 1171 IFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAF 1230

Query: 146  CKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
            CKLG+ + A       +E+ M+      +Y  LI    K +    A  L  EM  +   P
Sbjct: 1231 CKLGRRDSAIQLLNEMKEIGMQ--PTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRP 1288

Query: 199  NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
            +V TY+ +I  L   G ++ +     +M   GC P+     +++      GR  +A  L+
Sbjct: 1289 DVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLF 1348

Query: 259  NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPPNVTTYSALIDGFAK 317
              M     +P+VV Y+T+I  L  + S    V   ++ M+E+   P+  TYS LIDGF K
Sbjct: 1349 QEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCK 1408

Query: 318  AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV- 376
               +  A  +   M   G  P   AY  ++  L +   +  A  L +++  ENC  ++  
Sbjct: 1409 TNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK-ENCGSSSAR 1467

Query: 377  TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
             +   IK L   GR+D A+ + D+M +  C P++  YN L+ GL R   + EA   +  +
Sbjct: 1468 VYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRM 1527

Query: 437  EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            ++ G   +I +YN IL+G+ + G    A ++L  M     + D +++N ++ A    G  
Sbjct: 1528 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMF 1587

Query: 497  NNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
              A +L+  +   G +  D+I+Y+S+L  I
Sbjct: 1588 EEASKLMKEMNTLG-FEYDLITYSSILEAI 1616



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 210/432 (48%), Gaps = 9/432 (2%)

Query: 1    MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
            MI  L  + + + V  L  +M  EG    + V + ++I+++ ++G  + A+++   ++E 
Sbjct: 1190 MIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEI 1249

Query: 60   GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            G++PT KIY  ++      N       ++  M+     P+VFTY  L++ L K  R+D A
Sbjct: 1250 GMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEA 1309

Query: 120  YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
            Y    EM  +GC PD V    +++ + K G++++A +L      +R    V  YN +I  
Sbjct: 1310 YHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKA 1369

Query: 175  L--CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            L   K    E   W    M + GI P+  TYS +I   C    +E ++ +L +M  +G  
Sbjct: 1370 LFESKSRASEVPSWFE-RMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 1428

Query: 233  PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            P   ++ SL+       R   A +L+  +       +   Y+ +I  L   G +D+A+++
Sbjct: 1429 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 1488

Query: 293  SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              +M +  C P+V  Y+AL+ G A+ G L  A     RM  +GC P++ +Y  ++  L +
Sbjct: 1489 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 1548

Query: 353  NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                H+A  ++  M      P+ V++NT +  L   G  + A KL+ +M       ++ T
Sbjct: 1549 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLIT 1608

Query: 413  YNELLDGLLRVN 424
            Y+ +L+ + +V+
Sbjct: 1609 YSSILEAIGKVD 1620



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 221/482 (45%), Gaps = 17/482 (3%)

Query: 92   KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQ 150
            KR   E +  TY  L+  L    +    +K++ EM  N  C    V+ T +   +  LG 
Sbjct: 1105 KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICV---VTPTELSDVVRMLGN 1161

Query: 151  VEEARELAMRF--------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVI 201
             +  R+    F              YN++I  L  E + E+   L  EM   G   P+ +
Sbjct: 1162 AKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTV 1221

Query: 202  TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
            TYS +IS+ C +G  ++++ +L +M   G  P    +T L+  +      H A  L+  M
Sbjct: 1222 TYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEM 1281

Query: 262  IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              +   P+V  Y+ LI GL   G +DEA     +M+   C P+    + +I+   KAG L
Sbjct: 1282 RHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRL 1341

Query: 322  LGASQIWNRMISNGCSPNVVAYTCMVKVLCQN-NMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A +++  M +  C P+VV Y  ++K L ++ +   +  S  E+M      P++ T++ 
Sbjct: 1342 DDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSI 1401

Query: 381  FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKC 439
             I G C   R++ AM LL++M +    P    Y  L+D L +  R   A EL  E+ E C
Sbjct: 1402 LIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 1461

Query: 440  GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
            G     V Y  ++  + +AG + +A  +  +M   G   D   +N ++    + G ++ A
Sbjct: 1462 GSSSARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEA 1520

Query: 500  IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            +  + R++  G   PDI SY  +L G+  +GG   A   L  M    + P+  ++N ++ 
Sbjct: 1521 LSTMRRMQEHG-CIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLG 1579

Query: 560  SL 561
            +L
Sbjct: 1580 AL 1581



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 40/254 (15%)

Query: 8    KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
            K     V    ++MK  G+S S   +  +I+ + +    E+A+ +   + E G  P    
Sbjct: 1374 KSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAA 1433

Query: 68   YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
            Y  ++DAL    R+ +   ++  +K +    +   Y +++K L K  R+D A  +  EM 
Sbjct: 1434 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMN 1493

Query: 128  NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCK---EH 179
              GCAPD  +Y  ++S + + G ++EA     R         ++ YN ++NGL K    H
Sbjct: 1494 KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPH 1553

Query: 180  K--------------------------------IEEAFWLLCEMVDRGIDPNVITYSTII 207
            +                                 EEA  L+ EM   G + ++ITYS+I+
Sbjct: 1554 RAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSIL 1613

Query: 208  SSLCDVGNVETSLG 221
             ++  V +  T  G
Sbjct: 1614 EAIGKVDHEYTDQG 1627



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/263 (20%), Positives = 115/263 (43%), Gaps = 3/263 (1%)

Query: 304  NVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            + +TY ALI             ++   M+ N  C       + +V++L    M  QA ++
Sbjct: 1112 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITI 1171

Query: 363  IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLL 421
              ++    C P    +N+ I  L   G+ +   +L ++M  +  C P+  TY+ L+    
Sbjct: 1172 FYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFC 1231

Query: 422  RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
            ++ R   A +L+ E+++ G+Q     Y  ++    +      A  L  +M  +  + D  
Sbjct: 1232 KLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVF 1291

Query: 482  TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
            T+  +I    K G+++ A      ++  G   PD +   +++  +  +G + +A    Q+
Sbjct: 1292 TYTELIRGLGKAGRIDEAYHFFCEMQREG-CRPDTVFMNNMINFLGKAGRLDDAMKLFQE 1350

Query: 542  MLNEGICPNFATWNVLVRSLFSN 564
            M      P+  T+N ++++LF +
Sbjct: 1351 METLRCIPSVVTYNTIIKALFES 1373



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 9/189 (4%)

Query: 391  VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYN 449
            V  A+ +  Q+K  +C P    YN ++  L+   + ++  +L  E+   G    + VTY+
Sbjct: 1165 VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 1224

Query: 450  TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
             ++   C+ G    A QLL +M   G +     + ++I  + K    + A+ L + +R  
Sbjct: 1225 ALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQ 1284

Query: 510  GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLG 569
                PD+ +YT L+ G+  +G + EA+ +  +M  EG  P+     V + ++ + LG  G
Sbjct: 1285 -YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPD----TVFMNNMINFLGKAG 1339

Query: 570  PVYILDDIM 578
                LDD M
Sbjct: 1340 ---RLDDAM 1345



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 13/174 (7%)

Query: 393  WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            WA K     + YE   + +TY  L+  L  V +  E ++++ E+ +  I    V   T L
Sbjct: 1102 WAAK----RRNYEH--DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPI---CVVTPTEL 1152

Query: 453  HGVCR----AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
              V R    A MV +A  +  ++     +  A  +N +I     +G+     QL + +  
Sbjct: 1153 SDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMST 1212

Query: 509  GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
             G   PD ++Y++L+   C  G    A   L +M   G+ P    + +L+   F
Sbjct: 1213 EGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFF 1266


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/482 (30%), Positives = 233/482 (48%), Gaps = 7/482 (1%)

Query: 50  LKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           L  F  +   G+ P VK  N +L  L    R+  ++ +++ M + G+EP++ TYN LL +
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 110 LCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSICKLG--QVEEARELAMRFGSGV 165
             K  R D    LL EM  +G  C P+ V+Y  +++ + + G  +        MR     
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKA 300

Query: 166 S--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
           S   YN LI GL     +++   L  EM + GI P V+TY+ +I  L   G +E +    
Sbjct: 301 SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M   G  P++ ++ SLL GY   G   EA  L+  + R G  P V+ Y+ LI G C  
Sbjct: 361 VEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 420

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++EA  +  +M E  C P+V TY+ L+ G     +L    + ++ M+S G  P+  AY
Sbjct: 421 GDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAY 480

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
              +          ++  L E +  E    +TVT+N  I GLC  G +  A +L+ QM  
Sbjct: 481 NTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMIS 540

Query: 404 YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
               P+  TY  L+        ++EA +   ++   G+  + VTY  I+H  CR G +  
Sbjct: 541 NGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYS 600

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A+    KML EG + + IT+N++I+A C+ G+   A +    +   G   P+  +YT L+
Sbjct: 601 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERG-LVPNKYTYTLLI 659

Query: 524 WG 525
            G
Sbjct: 660 DG 661



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 224/446 (50%), Gaps = 13/446 (2%)

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEE-----ARELAMRFGSGVSVYNALINGLCKEH 179
           EM + G APD      ++  +    + ++     A  L +     +  YN L++   KE 
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 180 KIEEAFWLLCEMVDRGID--PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           + ++   LL EM  RG    PN +TY+ +I+ L   G +E +  ++ +M +   +    S
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRL---SKKASS 302

Query: 238 FT--SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           FT   L+ G L  G   +  DL   M  EG +P VV Y+ +IHGL  +G ++ A +   +
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+V TY++L++G+ KAGN   A  ++  +   G +P V+ Y  ++   C+   
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L E+M  + C P+  T+   +KG      +    +  D+M      P+   YN 
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNT 482

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            +   + +  + ++F+L   I   GI  + VTYN ++ G+C+ G + +A +L+ +M+  G
Sbjct: 483 RICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNG 542

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
            + D IT+  +I+A+C++G +  A +  + +   G   P  ++YT ++   C  G +  A
Sbjct: 543 LQPDCITYTCLIHAHCERGFLREARKFFNDMISDG-LPPSAVTYTVIIHAYCRRGNLYSA 601

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSL 561
           + + +KML EG+ PN  T+NVL+ +L
Sbjct: 602 YGWFRKMLEEGVEPNEITYNVLIHAL 627



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 214/428 (50%), Gaps = 8/428 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSC--SEGVFISVINSYRRVGLAEQALKMFYRIRE 58
           +++   ++   D +  LL++M+  G SC  ++  +  VI    R G  E+A ++   +R 
Sbjct: 237 LLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMR- 295

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
              K +   YN ++  LLA      ++ +   M+ +G+ P V TYN ++  L ++ +++ 
Sbjct: 296 LSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEA 355

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALIN 173
           A    VEM   G  PD ++Y ++++  CK G  +EA  L     R G   +V  YN LI+
Sbjct: 356 AQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILID 415

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           G C+   +EEA  L  EMV++G  P+V TY+ ++    +V ++  +     +M  +G  P
Sbjct: 416 GYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRP 475

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           +  ++ + +   +  G   ++  L   ++ EG   + V Y+ LI GLC  G++ +A  + 
Sbjct: 476 DCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELM 535

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            QM  N   P+  TY+ LI    + G L  A + +N MIS+G  P+ V YT ++   C+ 
Sbjct: 536 MQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRR 595

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              + A+    KM  E   PN +T+N  I  LC  GR   A +   +M +   +PN  TY
Sbjct: 596 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTY 655

Query: 414 NELLDGLL 421
             L+DG L
Sbjct: 656 TLLIDGKL 663



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 83/167 (49%), Gaps = 4/167 (2%)

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +M  +   P++   N++L  L    R  +   +  E+ + GI+ +IVTYNT+L    + G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 460 MVVEAFQLLGKMLIEGTKL--DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
              +   LL +M   G+    + +T+N++I    ++G +  A +L++ +R   + +    
Sbjct: 246 RKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSKKASS--F 303

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           +Y  L+ G+   G +++      +M NEGI P   T+N ++  L  +
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQS 350


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/468 (29%), Positives = 235/468 (50%), Gaps = 12/468 (2%)

Query: 49  ALKMFYRIREFGLKPTVKIYN----HI---LDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           A K+F ++  +GL  +V   N    H+   LD +    +   +  +   M+  G++PN +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
           TYN ++  LCK  +V  A ++L EM ++G APD V YTT++   CKLG V  A  L    
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 158 -AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              +       Y A+I GLC+  ++ EA  L  EMV + ++P+ +TY+ +I   C  G +
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +  +  QM   G  PNI ++T+L  G    G    A++L + M R+G   N+  Y++L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           ++GLC  G++D+AV +   ME     P+  TY+ L+D + K+  ++ A ++  +M+    
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P VV +  ++   C + M      L++ M  +   PN  T+N+ IK  C    +    +
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +   M     +P+  TYN L+ G  +   +KEA+ L  ++   G  L + +YN ++ G  
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +    +EA +L  +M  EG   D   +NI       +GK+   ++L D
Sbjct: 585 KRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCD 632



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 203/392 (51%), Gaps = 1/392 (0%)

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           ++G+    K E    L+ EM  +G+ PN  TY+ +I  LC  G V  +  +L +M   G 
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 254

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS 291
            P+   +T+L+ G+   G    A  L++ M +    P+ + Y+ +I GLC  G + EA  
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 314

Query: 292 VSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLC 351
           + ++M      P+  TY+ALIDG+ K G +  A  + N+M+  G +PN+V YT +   LC
Sbjct: 315 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 374

Query: 352 QNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
           +      A+ L+ +M  +    N  T+N+ + GLC  G +D A+KL+  M+     P+  
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           TY  L+D   +   +  A EL+ ++    +Q  +VT+N +++G C +GM+ +  +LL  M
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494

Query: 472 LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG 531
           L +G   +A T+N +I  YC +  +    ++   +   G   PD  +Y  L+ G C +  
Sbjct: 495 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV-PDGNTYNILIKGHCKARN 553

Query: 532 MQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           M+EA+   + M+ +G     +++N L++  + 
Sbjct: 554 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYK 585



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 194/392 (49%), Gaps = 1/392 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN +I  LCK  K+ EA  +L EM+  GI P+ + Y+T+I   C +GNV ++  +  +M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             R  +P+  ++T+++ G    GR  EA  L++ M+ +   P+ V Y+ LI G C  G M
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            EA S+  QM +    PN+ TY+AL DG  K G +  A+++ + M   G   N+  Y  +
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           V  LC+     QA  L++ M      P+ VT+ T +   C    +  A +LL QM   E 
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P + T+N L++G      +++  +L+  + + GI  N  TYN+++   C    +    +
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +   M  +G   D  T+NI+I  +CK   +  A   L R   G  +N  + SY +L+ G 
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA-WFLHRDMVGKGFNLTVSSYNALIKGF 583

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
                  EA    ++M  EG+  +   +N+  
Sbjct: 584 YKRKKFLEARELFEQMRREGLVADREIYNIFA 615



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 175/333 (52%), Gaps = 1/333 (0%)

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           V  CN  I   +  L G  +  +      L   M  +G  PN   Y+ +I  LC  G + 
Sbjct: 181 VDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVA 240

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA  V  +M      P+   Y+ LIDGF K GN+  A ++++ M     SP+ + YT ++
Sbjct: 241 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 300

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LCQ     +A  L  +M  +   P+ VT+   I G C  G++  A  L +QM Q    
Sbjct: 301 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 360

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PNI TY  L DGL +   V  A EL+ E+ + G++LNI TYN++++G+C+AG + +A +L
Sbjct: 361 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 420

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           +  M + G   DA+T+  ++ AYCK  ++  A +LL R     E  P ++++  L+ G C
Sbjct: 421 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL-RQMLDRELQPTVVTFNVLMNGFC 479

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            SG +++    L+ ML +GI PN  T+N L++ 
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 512



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 217/440 (49%), Gaps = 7/440 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+++M+++G+  +   +  VI    + G   +A ++   +   G+ P   IY  ++D   
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S    ++  M++  + P+  TY  ++  LC+  RV  A KL  EM  K   PD V
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 137 SYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++   CK G+++EA     + L M     +  Y AL +GLCK  +++ A  LL EM
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +G++ N+ TY+++++ LC  GN++ ++ ++  M V G +P+  ++T+L+  Y      
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A +L  +M+     P VV ++ L++G C +G +++   +   M E    PN TTY++L
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I  +    N+   ++I+  M + G  P+   Y  ++K  C+     +A  L   M  +  
Sbjct: 510 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 569

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
                ++N  IKG     +   A +L +QM++   + +   YN   D      +++   E
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLE 629

Query: 432 LVTE-IEKCGIQLNIVTYNT 450
           L  E IEKC +  +I T NT
Sbjct: 630 LCDEAIEKCLVG-DIQTKNT 648



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 41/286 (14%)

Query: 8   KC-EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           KC E+D    LL +M  +G+  +   + S++N   + G  +QA+K+   +   G  P   
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  ++DA          + +   M    ++P V T+N+L+   C +  ++   KLL  M
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGLCKEHKI 181
             KG  P+A +Y +++   C    +    E+       GV    + YN LI G CK   +
Sbjct: 495 LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNM 554

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           +EA++L  +MV +G                                    N  + S+ +L
Sbjct: 555 KEAWFLHRDMVGKGF-----------------------------------NLTVSSYNAL 579

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           +KG+    +  EA +L+ +M REG + +   Y+         G M+
Sbjct: 580 IKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 625



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 5/217 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L++ M+V G       + +++++Y +     +A ++  ++ +  L+PTV  +N 
Sbjct: 414 IDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNV 473

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++             +   M   G+ PN  TYN L+K  C  N +    ++   M  KG
Sbjct: 474 LMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 533

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF 185
             PD  +Y  ++   CK   ++EA    R++  + F   VS YNALI G  K  K  EA 
Sbjct: 534 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 593

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
            L  +M   G+  +   Y+       D G +E +L +
Sbjct: 594 ELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 265/543 (48%), Gaps = 45/543 (8%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           PT+  YN ++D     +R  +   I   + ++G+ P+ F+Y+ L+    K+  VD A+ L
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCK 177
            +EM  +G  P  +   +I+  +CK+ ++++A  +  +   SG++     Y+ +I+GLCK
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
              +++A  +L +MV+ G  PN ITY+++I      G    S+ +  QM   G  P + +
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN-------------- 283
             S +      GRT+EA  +++ M+ +G  P++++YST++HG  +               
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336

Query: 284 -----------------------GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
                                  G MD+A+ +   M+     P+  T++ +I    + G 
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGR 396

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT-FN 379
           L  A   +N M+  G  P+   Y C+++  C +    +A  LI +M  ++ PP  V  F+
Sbjct: 397 LDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 456

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
           + I  LC  GRV     ++D M Q    PN+ T+N L++G   V  ++EAF L+  +   
Sbjct: 457 SIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASI 516

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           GI+ N   Y T++ G C+ G + +A  +   ML +G K  ++ ++II++   +  +   A
Sbjct: 517 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
            ++   +   G     I +Y  +L G+C +    EA + L+K+    +  +  T+N+++ 
Sbjct: 577 KKMFHEMIESGT-TVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVIS 635

Query: 560 SLF 562
           ++F
Sbjct: 636 AMF 638



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 258/541 (47%), Gaps = 21/541 (3%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+I  + + G  ++A  +F  + E G+ P + I N I+  L           I   M   
Sbjct: 139 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 198

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P++FTY++++  LCK+  +D A ++L +M   G  P++++Y +++      G   E+
Sbjct: 199 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 258

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII-- 207
             +  +  S      V   N+ I+ L K  +  EA  +   MV +G  P++I+YST++  
Sbjct: 259 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 318

Query: 208 ------SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
                 S L DV N      I   M  +G  PN H F  L+  Y   G   +A  ++  M
Sbjct: 319 YATATDSCLADVHN------IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDM 372

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
             +G +P+ V ++T+I  LC  G +D+A+     M +   PP+   Y  LI G    G L
Sbjct: 373 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGEL 432

Query: 322 LGASQIWNRMISNGCSPNVVAY-TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           + A ++ + M++    P  V Y + ++  LC+     +   +++ M      PN VTFN+
Sbjct: 433 VKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNS 492

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            ++G C  G ++ A  LLD M      PN   Y  L+DG  +  R+ +A  +  ++   G
Sbjct: 493 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKG 552

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           ++   V Y+ ILHG+ +A     A ++  +M+  GT +   T+ +++   C+    + A 
Sbjct: 553 VKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEAN 612

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            LL+++        DII++  ++  +   G  QEA      +   G+ PN  T+++++ +
Sbjct: 613 MLLEKLF-AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITN 671

Query: 561 L 561
           L
Sbjct: 672 L 672



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 258/539 (47%), Gaps = 43/539 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM   G   +   + S+I+ Y   G+  +++++F ++   G
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 269

Query: 61  LKPTVKIYNHILDALLAENR-------------------------------------FSM 83
           + PTV   N  + AL    R                                      + 
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329

Query: 84  INPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
           ++ I++ M   G+ PN   +NIL+ A  +   +D A  +  +M NKG  PD V++ T++S
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 389

Query: 144 SICKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
           S+C++G++++A  +       GV    +VY  LI G C   ++ +A  L+ EM+++ I P
Sbjct: 390 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 449

Query: 199 NVITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
             + Y S+II++LC  G V     I+  M   G  PN+ +F SL++GY L G   EA  L
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFAL 509

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + M   G  PN   Y TL+ G C NG +D+A++V   M      P    YS ++ G  +
Sbjct: 510 LDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQ 569

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A     A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +T
Sbjct: 570 ARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIIT 629

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           FN  I  +   GR   A +L D +  Y  +PNI TY+ ++  L++    +EA  L   +E
Sbjct: 630 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           K G   +    N I+  +     V +A   L  +      L+A T +++   + ++G +
Sbjct: 690 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 138/574 (24%), Positives = 265/574 (46%), Gaps = 10/574 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I++L +  E+D  + ++Q+M   G++     +  +I+   +    ++A ++  ++ E G
Sbjct: 175 IIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG 234

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN ++        ++    ++  M   G+ P V   N  + AL K+ R + A 
Sbjct: 235 TRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAK 294

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICK-----LGQVEEARELAMRFG--SGVSVYNALIN 173
            +   M  KG  PD +SY+T++          L  V     L +  G      V+N LIN
Sbjct: 295 CIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILIN 354

Query: 174 GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
              +   +++A  +  +M ++G+ P+ +T++T+ISSLC +G ++ +L     M   G  P
Sbjct: 355 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 414

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY-STLIHGLCSNGSMDEAVSV 292
           +   +  L++G    G   +A +L + M+ +   P  V Y S++I+ LC  G + E   +
Sbjct: 415 SEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI 474

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M +    PNV T+++L++G+   GN+  A  + + M S G  PN   Y  +V   C+
Sbjct: 475 MDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 534

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
           N     A ++   M  +   P +V ++  + GL    R   A K+  +M +     +I T
Sbjct: 535 NGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHT 594

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           Y  +L GL R N   EA  L+ ++    ++ +I+T+N ++  + + G   EA +L   + 
Sbjct: 595 YGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAIS 654

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G   +  T++++I    K+     A  L   +   G  + D      ++  + N   +
Sbjct: 655 TYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHAS-DSRLLNHIVRMLLNKAEV 713

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
            +A  YL  +    +    +T ++L  SLFS  G
Sbjct: 714 AKASNYLSIIGENNLTLEASTISLLA-SLFSREG 746



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 141/282 (50%), Gaps = 5/282 (1%)

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           PP + TY+ LID + +         I  R++ NG  P+  +Y+ ++    ++    +AH 
Sbjct: 97  PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHC 155

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M  +   P  +  N+ IK LC    +D A  ++ +M      P++ TY+ ++DGL 
Sbjct: 156 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 215

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   + +A  ++ ++ + G + N +TYN+++HG   +GM  E+ ++  +M   G      
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY--L 539
             N  I+A  K G+ N A  + D +   G   PDIISY+++L G   +     A ++   
Sbjct: 276 NCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHNIF 334

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             ML +GI PN   +N+L+ + ++  G +    ++ + M NK
Sbjct: 335 NLMLTKGIAPNKHVFNILINA-YARCGMMDKAMLIFEDMQNK 375


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/546 (25%), Positives = 272/546 (49%), Gaps = 19/546 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F S+++SY ++G  + A   F  + + GL P+V  +N +++ L      +    + S+M 
Sbjct: 244 FNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 303

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G+EP+  TYNIL+K       + GA +++ +M +KG +PD ++YT ++   C+LG ++
Sbjct: 304 KHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNID 363

Query: 153 EA----RELAMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
                 +++  R     S+  Y+ +++GLCK  +++EA  L  ++   G+ P+++ YS +
Sbjct: 364 MGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIV 423

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC +G  + ++ +  +M  +   PN  +  +++ G    G   EA  L + +I  G 
Sbjct: 424 IHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGD 483

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             +++ Y+ +I G   +G ++EA+ +     E+   PNV T+++LI G+ K  N+  A +
Sbjct: 484 TLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARK 543

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I + +   G  P+VV+YT ++              L  +M  E  PP  VT++   KGLC
Sbjct: 544 ILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLC 603

Query: 387 ------GCGRV------DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
                  C +V      +    +L  M+     P+  TYN ++  L RV  +  AFEL  
Sbjct: 604 RGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFK 663

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           +++   +     TYN ++  +C  G + +A + L  +      L    +  +I A+C +G
Sbjct: 664 KMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKG 723

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
               A+ L +++   G +N  I  Y++++  +C      E+  +   ML+ GI P+    
Sbjct: 724 DPEMAVILFNQLLDRG-FNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDIC 782

Query: 555 NVLVRS 560
            V+++S
Sbjct: 783 EVMIKS 788



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 265/538 (49%), Gaps = 26/538 (4%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R+ + +++L +  ++++  L  + + YN +L      ++   +  +Y  +K    + N  
Sbjct: 155 RLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDK---MWDVYKEIK----DKNEH 207

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---A 158
           TY+ ++  LC+  +++ A   L     K   P  VS+ +I+SS CKLG V+ A+      
Sbjct: 208 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTV 267

Query: 159 MRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           ++ G   SVY  N LINGLC    I EA  L  +M   G++P+ +TY+ ++     +G +
Sbjct: 268 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMI 327

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYST 275
             +  ++  M  +G +P++ ++T LL G    G       L   M+  GF L +++ YS 
Sbjct: 328 SGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSV 387

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++ GLC  G +DEA+S+ Y +E     P++  YS +I G  K G    A ++++ M    
Sbjct: 388 MLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKR 447

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN      ++  LCQ  M  +A SL++ +       + + +N  I G    G ++ A+
Sbjct: 448 ILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEAL 507

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +L     +    PN+ T+N L+ G  +   + EA +++  I+  G+  ++V+Y T++   
Sbjct: 508 ELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAY 567

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN-- 513
              G +    +L  +M  EG     +T+++I    C+  K+ N  Q+L R R   ++N  
Sbjct: 568 ANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVL-RERILEKFNHV 626

Query: 514 ----------PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
                     PD I+Y +++  +C    +  AF   +KM ++ + P  AT+N+L+ SL
Sbjct: 627 LRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSL 684



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 263/552 (47%), Gaps = 29/552 (5%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D   Y+L++MK   ++ S   + SV+ ++R         KM+   +E   K     Y+ 
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLYNFRETD------KMWDVYKEIKDKNE-HTYST 211

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L  + +           +   + P+V ++N ++ + CK   VD A      +   G
Sbjct: 212 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCG 271

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAF 185
             P   S+  +++ +C +G + EA ELA      GV      YN L+ G      I  A 
Sbjct: 272 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAG 331

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN-PNIHSFTSLLKG 244
            ++ +M+D+G+ P+VITY+ ++   C +GN++  L +L  M  RG    +I  ++ +L G
Sbjct: 332 EVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSG 391

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  EA  L+  +   G  P++VAYS +IHGLC  G  D AV V  +M      PN
Sbjct: 392 LCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPN 451

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             T  A++ G  + G LL A  + + +IS+G + +++ Y  ++    ++    +A  L +
Sbjct: 452 SRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFK 511

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
                   PN  TFN+ I G C    +  A K+LD +K Y  +P++ +Y  L+D      
Sbjct: 512 VAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCG 571

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA-----------GMVVEAF-QLLGKML 472
            +K   EL  E++  GI    VTY+ I  G+CR              ++E F  +L  M 
Sbjct: 572 SIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDME 631

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            EG   D IT+N II   C+   ++ A +L  +++     +P   +Y  L+  +C  G +
Sbjct: 632 SEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQN-LDPTSATYNILIDSLCIYGCI 690

Query: 533 QEA--FIY-LQK 541
           ++A  F+Y LQK
Sbjct: 691 RKADRFLYSLQK 702


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 265/563 (47%), Gaps = 44/563 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF 59
           +I KL      + V+ +L +M    G    E +F++++    R  +  Q +K+   I +F
Sbjct: 133 LIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKF 192

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIY-SNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
           G  P++KI+N ILD L+ E+   +    Y   M  +G+  + +T+ IL+K LC  NR+  
Sbjct: 193 GENPSLKIFNSILDVLVKED-IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGD 251

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-YNALINGLCK 177
           A+KLL  M ++G  P+ V Y T++ ++CK G+V  AR L         V +N LI+  C+
Sbjct: 252 AFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQ 311

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           E  + +A  LL +    G  P+V+T + ++  LC  G V   + +L ++   G   ++ +
Sbjct: 312 EENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVA 371

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + +L+KG+ + G+      +   M  +G LPNV  Y+ L  G C +G +D A+ +   M+
Sbjct: 372 YNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMK 431

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN--GCSPNVVAYTCMVKVLCQNNM 355
            +    N  TY  LI G    G +    +I   M  +  G    +  Y  ++  L + N 
Sbjct: 432 TDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQ 491

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
           F +A   + KM  E   P  V  +  I G C  G +  A ++ DQM +   +P++  Y  
Sbjct: 492 FEEALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVC 549

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ G  +   V+EAFEL+ E+   G      T+N ++   C  G V  A +L+  M+  G
Sbjct: 550 LIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRG 609

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              D  +++ ++ A C +G    A++L                                 
Sbjct: 610 CLPDMGSYSPMVDALCNKGDFQKAVRL--------------------------------- 636

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
             +LQ M+ + I P+++TWN ++
Sbjct: 637 --FLQ-MVEKDILPDYSTWNSML 656



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 227/487 (46%), Gaps = 49/487 (10%)

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGV------SVYNALINGLCKEHKIEEAFWLLCE 190
           +Y  ++  +C   + E  +E+     S +      S++  ++ GL +   + +   +L  
Sbjct: 129 TYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDL 188

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +   G +P++  +++I+  L              +M + G + + ++F  L+KG  L  R
Sbjct: 189 ITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNR 248

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A  L   M   G  PN V Y+T+IH LC NG +  A S+  +M E    P+  T++ 
Sbjct: 249 IGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE----PSDVTFNV 304

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI  + +  NL+ A  +  +  S G  P+VV  T +V +LC+     +   ++E++    
Sbjct: 305 LISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMG 364

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + V +NT IKG C  G+     ++L  M+   CLPN+ TYN L  G      +  A 
Sbjct: 365 GVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAI 424

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM----------------LIE 474
           +L  +++  GI  N +TY+T++ G+C  G + + F++L  M                +I 
Sbjct: 425 DLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIY 484

Query: 475 G--------------TKLD-----AITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNP 514
           G              TK++     A+  ++ I  +C +G + +A ++ D+ I+ GG   P
Sbjct: 485 GLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGV--P 542

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
            ++ Y  L+ G C  G ++EAF  + +M++ G  P   T+N L+ S F   G +G    L
Sbjct: 543 SVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALI-SAFCGQGKVGSALKL 601

Query: 575 DDIMANK 581
            + M  +
Sbjct: 602 MEDMVGR 608



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 6/293 (2%)

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTYSALIDGFAKAGNLLGA 324
           F+ N   Y  LIH LCS    +    V  +M  +   PP+ + +  ++ G  +A  +   
Sbjct: 123 FIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQM 182

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++ + +   G +P++  +  ++ VL + ++        +KM       +  TF   +KG
Sbjct: 183 IKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFGILMKG 242

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   R+  A KLL  MK     PN   YN ++  L +  +V  A  L+ E+    ++ +
Sbjct: 243 LCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPS 298

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            VT+N ++   C+   +V+A  LL K    G   D +T   ++   CK G+V   +++L+
Sbjct: 299 DVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLE 358

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           R+   G    D+++Y +L+ G C  G  +     L+ M  +G  PN  T+N+L
Sbjct: 359 RVESMGGV-VDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNIL 410



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 41/268 (15%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N++ Y+ LI  F    N+ G S + N       +  V  +  +  ++ +     QA    
Sbjct: 57  NISKYAKLI-MFCNVSNI-GRSSVVNLQSKPISTTPVPTHQHIAHLILEQKSASQALQTF 114

Query: 364 EKMA-FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM-KQYECLPNITTYNELLDGLL 421
              +   N   N  T+   I  LC   R +   ++LD+M       P+ + +  ++ GL 
Sbjct: 115 RWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLG 174

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R   V++  +++  I K G   ++  +N+IL  + +  + +       KM++ G   D  
Sbjct: 175 RARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDY 234

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           TF I                                    L+ G+C +  + +AF  LQ 
Sbjct: 235 TFGI------------------------------------LMKGLCLTNRIGDAFKLLQV 258

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLG 569
           M + G  PN   +N ++ +L  N G +G
Sbjct: 259 MKSRGKTPNTVIYNTMIHALCKN-GKVG 285


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 262/547 (47%), Gaps = 44/547 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D  + +L+QM   G   +   + S+I+ Y   G+  +++++F ++   G
Sbjct: 286 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 345

Query: 61  LKPTVKIYNHILDALLAENR--------------------------------------FS 82
           + PTV   N  + AL    R                                      + 
Sbjct: 346 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWV 405

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
           M + I++ M   G+ PN   +NIL+ A  +   +D A  +  +M NKG  PD V++ T++
Sbjct: 406 MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 465

Query: 143 SSICKLGQVEEA-RELAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
           SS+C++G++++A  +       GV    +VY  LI G C   ++ +A  L+ EM+++ I 
Sbjct: 466 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 525

Query: 198 PNVITY-STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           P  + Y S+II++LC  G V     I+  M   G  PN+ +F SL++GY L G   EA  
Sbjct: 526 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 585

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L + M   G  PN   Y TL+ G C NG +D+A++V   M      P    YS ++ G  
Sbjct: 586 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 645

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           +A     A ++++ MI +G + ++  Y  ++  LC+NN   +A+ L+EK+   N   + +
Sbjct: 646 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII 705

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           TFN  I  +   GR   A +L D +  Y  +PNI TY+ ++  L++    +EA  L   +
Sbjct: 706 TFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISV 765

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           EK G   +    N I+  +     V +A   L  +      L+A T +++   + ++GK 
Sbjct: 766 EKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKY 825

Query: 497 NNAIQLL 503
              I+LL
Sbjct: 826 REHIKLL 832



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 272/562 (48%), Gaps = 50/562 (8%)

Query: 49  ALKMFYRIREFGLK----PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           A+++F R+  +       PT+  YN ++D     +R  +   I   + ++G+ P+ F+Y+
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS 215

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GS 163
            L+    K+  VD A+ L +EM  +G  P  +   +I+  +CK+ ++++A  +  +   S
Sbjct: 216 -LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 164 GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           G++     Y+ +I+GLCK   +++A  +L +MV+ G  PN ITY+++I      G    S
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST---- 275
           + +  QM   G  P + +  S +      GRT+EA  +++ M+ +G  P++++YST    
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASW 394

Query: 276 --------------------LIHGLCSN--------------GSMDEAVSVSYQMEENSC 301
                               L  G+  N              G MD+A+ +   M+    
Sbjct: 395 VCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 454

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P+  T++ +I    + G L  A   +N M+  G  P+   Y C+++  C +    +A  
Sbjct: 455 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 514

Query: 362 LIEKMAFENCPPNTVT-FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           LI +M  ++ PP  V  F++ I  LC  GRV     ++D M Q    PN+ T+N L++G 
Sbjct: 515 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 574

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             V  ++EAF L+  +   GI+ N   Y T++ G C+ G + +A  +   ML +G K  +
Sbjct: 575 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 634

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           + ++II++   +  +   A ++   +   G     I +Y  +L G+C +    EA + L+
Sbjct: 635 VLYSIILHGLFQARRTTAAKKMFHEMIESGT-TVSIHTYGVVLGGLCRNNCTDEANMLLE 693

Query: 541 KMLNEGICPNFATWNVLVRSLF 562
           K+    +  +  T+N+++ ++F
Sbjct: 694 KLFAMNVKFDIITFNIVISAMF 715



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 255/536 (47%), Gaps = 10/536 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+I  + + G  ++A  +F  + E G+ P + I N I+  L           I   M   
Sbjct: 215 SLIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P++FTY++++  LCK+  +D A ++L +M   G  P++++Y +++      G   E+
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             +  +  S      V   N+ I+ L K  +  EA  +   MV +G  P++I+YST  S 
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASW 394

Query: 210 LCDVGNVETSL---GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +C        +    I   M  +G  PN H F  L+  Y   G   +A  ++  M  +G 
Sbjct: 395 VCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 454

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P+ V ++T+I  LC  G +D+A+     M +   PP+   Y  LI G    G L+ A +
Sbjct: 455 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKE 514

Query: 327 IWNRMISNGCSPNVVAY-TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           + + M++    P  V Y + ++  LC+     +   +++ M      PN VTFN+ ++G 
Sbjct: 515 LISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGY 574

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G ++ A  LLD M      PN   Y  L+DG  +  R+ +A  +  ++   G++   
Sbjct: 575 CLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTS 634

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V Y+ ILHG+ +A     A ++  +M+  GT +   T+ +++   C+    + A  LL++
Sbjct: 635 VLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEK 694

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +        DII++  ++  +   G  QEA      +   G+ PN  T+++++ +L
Sbjct: 695 LF-AMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNL 749



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 170/400 (42%), Gaps = 6/400 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    + + M+ +G+      F +VI+S  R+G  + AL  F  + + G+ P+  +Y  
Sbjct: 439 MDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGC 498

Query: 71  ILDALLAENRFSMINPIYSNM-KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           ++              + S M  +D   P V  ++ ++  LCK  RV     ++  M   
Sbjct: 499 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 558

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
           G  P+ V++ +++   C +G +EEA  L     S G+     +Y  L++G CK  +I++A
Sbjct: 559 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 618

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  +M+ +G+ P  + YS I+  L        +  +  +M   G   +IH++  +L G
Sbjct: 619 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 678

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
                 T EA+ L  ++       +++ ++ +I  +   G   EA  +   +      PN
Sbjct: 679 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 738

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           + TYS +I    K  +   A  ++  +  +G + +      +V++L       +A + + 
Sbjct: 739 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 798

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            +   N      T +         G+    +KLL    Q+
Sbjct: 799 IIGENNLTLEASTISLLASLFSREGKYREHIKLLPAKYQF 838


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 265/565 (46%), Gaps = 46/565 (8%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++N+  + G  E AL+ F ++      P    +  ++D L    R       +  MK   
Sbjct: 166 LLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDGLFRAIRVDEACYYFEEMKHTA 222

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + PN +TY +++  L K  +V  A ++L EM      P   +YT+++   CK G + +A 
Sbjct: 223 I-PNNWTYTVVINGLVKAGKVAEAERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAY 277

Query: 156 EL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L   M+   +      YN LI+G C+  +I+ A+ LL EM      P++ TY  +I+ L
Sbjct: 278 HLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGL 337

Query: 211 CDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           C    +  +  +LG +     C PN+ S+ +L+ G+    R ++A  L+  M+  G  P+
Sbjct: 338 CRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPD 397

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV YSTLI GLC+ G   EA S   +M      P V  YS++I G  +AG L  AS +++
Sbjct: 398 VVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFD 457

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M++NGC PN+  Y  ++  LC+      A   +++M    C P+ VT+ T I GLC   
Sbjct: 458 SMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWS 517

Query: 390 RVDWAMKL----LDQ------------MKQYECL----------------PNITTYNELL 417
           R D A  L    L+Q            +    CL                P    Y  ++
Sbjct: 518 RTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVI 577

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           + L + N + EA +L+ ++   GI+ +  T + ++  +CR    V A   L +M+  G+K
Sbjct: 578 ESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSK 637

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
               T++ ++ A  K GK + A  +L R+       PD + Y  L+    N   ++EA  
Sbjct: 638 PSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARN 697

Query: 538 YLQKMLNEGICPNFATWNVLVRSLF 562
            LQ++ ++    +   +N L++ LF
Sbjct: 698 VLQELKSKWGIQSIVAYNTLLKGLF 722



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 260/558 (46%), Gaps = 45/558 (8%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G  E+A ++F       L P    Y  ++  L    +  +   +Y  M   G+ P V 
Sbjct: 102 RTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVL 161

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
           T   LL ALCK+  ++ A +   +M +  CA    ++T ++  + +  +V+EA     E+
Sbjct: 162 TCKFLLNALCKSGNLELALRYFEKMSSIPCA---ATWTILIDGLFRAIRVDEACYYFEEM 218

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                     Y  +INGL K  K+ EA  +L EM      P +  Y+++I   C  G++ 
Sbjct: 219 KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLANYTSVIGGHCKAGDMG 274

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +  +L  M  +G   +  ++ +L+ G+        A +L   M    F+P++  Y  LI
Sbjct: 275 KAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILI 334

Query: 278 HGLCSNGSMDEAVSVSYQME-ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
            GLC    + EA  +   +  E+ C PNV +Y+ LIDGF+KA  +  A Q++  M++ G 
Sbjct: 335 AGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQ 394

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV Y+ +++ LC      +AHS +E+M  +   P    +++ I GLC  G +D A  
Sbjct: 395 HPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAAST 454

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           + D M    C PN+  YN L+ GL +  R+ +A   V E+ + G   + VTY T++ G+C
Sbjct: 455 VFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLC 514

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIII---------------------------YA 489
           R     EA  L  + L +G ++   + N++I                           YA
Sbjct: 515 RWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYA 574

Query: 490 -----YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
                 CK+  +  A QLL+ + G G   PD  +  +L+  +C       A  +L++M+ 
Sbjct: 575 TVIESLCKENNLAEARQLLEDMIGAG-IKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVR 633

Query: 545 EGICPNFATWNVLVRSLF 562
            G  P+  T++ L+ +LF
Sbjct: 634 LGSKPSVGTYSTLLNALF 651



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 274/575 (47%), Gaps = 19/575 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L     +D   Y  ++MK   +  +   +  VIN   + G   +A ++   ++E  
Sbjct: 198 LIDGLFRAIRVDEACYYFEEMKHTAIP-NNWTYTVVINGLVKAGKVAEAERV---LQEMP 253

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PT+  Y  ++              +  +MKR G + +  TYN L+   C+   +D AY
Sbjct: 254 V-PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAY 312

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------GVSVYNALING 174
           +LL EM +    PD  +Y  +++ +C+  ++ EAR+L     +       V  YN LI+G
Sbjct: 313 ELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDG 372

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             K  ++ +A+ L  EMV  G  P+V+TYST+I  LC+ G    +   L +M  +   P 
Sbjct: 373 FSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPK 432

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           +  ++S++ G    G    AS +++ M+  G  PN+  Y++LI+GLC  G + +A     
Sbjct: 433 VPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVK 492

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M E  C P+  TY  LI G  +      A  ++ R +  G    +   +C V V+    
Sbjct: 493 EMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGI--EISETSCNV-VIASLR 549

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              QA  ++  +      P    + T I+ LC    +  A +LL+ M      P+ +T +
Sbjct: 550 CLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVD 609

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+  + R ++   A   + E+ + G + ++ TY+T+L+ + +AG   EA  +L +++  
Sbjct: 610 ALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISH 669

Query: 475 GTKL-DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN-PDIISYTSLLWGICNSGGM 532
            +   D + +  +I AY  Q +V  A  +L  ++   +W    I++Y +LL G+  +  +
Sbjct: 670 TSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKS--KWGIQSIVAYNTLLKGLFRTRNL 727

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
           Q  +  L++M       N AT+N+L++  F  LG 
Sbjct: 728 QMVYELLREMKRNEFVVNEATFNILIQG-FCRLGQ 761



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 229/495 (46%), Gaps = 39/495 (7%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +LL+ MK +G       + ++I+ + R+   ++A ++   ++     P +  Y+ ++  L
Sbjct: 278 HLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGL 337

Query: 76  LAENRFSMINPIYSNMK-RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
               R S    +   ++  D   PNV +YN L+    K  RV+ AY+L +EM   G  PD
Sbjct: 338 CRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPD 397

Query: 135 AVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V+Y+T++  +C  G+  EA       +  +    V VY+++I+GLC+  +++ A  +  
Sbjct: 398 VVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFD 457

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            MV  G  PN+  Y+++I  LC  G +  +   + +M  RGC+P+  ++ +L+ G     
Sbjct: 458 SMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWS 517

Query: 250 RTHEASDLWNRMIREGF--------------------------------LPNVVAYSTLI 277
           RT EA DL+ R + +G                                  P    Y+T+I
Sbjct: 518 RTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVI 577

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC   ++ EA  +   M      P+ +T  AL+    +    + A      M+  G  
Sbjct: 578 ESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSK 637

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKM-AFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           P+V  Y+ ++  L +     +AH ++ ++ +  +C P+ + +   I       +V+ A  
Sbjct: 638 PSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARN 697

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +L ++K    + +I  YN LL GL R   ++  +EL+ E+++    +N  T+N ++ G C
Sbjct: 698 VLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFC 757

Query: 457 RAGMVVEAFQLLGKM 471
           R G    A ++L +M
Sbjct: 758 RLGQTDRAVRVLSEM 772



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 198/402 (49%), Gaps = 10/402 (2%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F   V  YN     L +  + EEA+ L  E   + + P+ ITY  +I  LC+ G ++ + 
Sbjct: 86  FRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLAC 145

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  +M  RG  P + +   LL      G    A   + +M     +P    ++ LI GL
Sbjct: 146 SLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM---SSIPCAATWTILIDGL 202

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
                +DEA     +M+  + P N  TY+ +I+G  KAG +  A ++   M      P +
Sbjct: 203 FRAIRVDEACYYFEEMKHTAIPNN-WTYTVVINGLVKAGKVAEAERVLQEMP----VPTL 257

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
             YT ++   C+     +A+ L+E M  +    + +T+NT I G C    +D A +LL++
Sbjct: 258 ANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEE 317

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQLNIVTYNTILHGVCRAG 459
           MK  + +P+I TY+ L+ GL R  R+ EA +L+  +  +     N+V+YNT++ G  +A 
Sbjct: 318 MKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            V +A+QL  +M+  G   D +T++ +I   C  G+ + A   L+ +  G +  P +  Y
Sbjct: 378 RVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEM-VGKKILPKVPVY 436

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +S++ G+C +G +  A      M+  G  PN A +N L+  L
Sbjct: 437 SSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGL 478



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 197/436 (45%), Gaps = 4/436 (0%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +   ++    L  +M   G       + ++I      G A +A      +    
Sbjct: 369 LIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKK 428

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V +Y+ ++  L         + ++ +M  +G +PN+  YN L+  LCK  R+  A 
Sbjct: 429 ILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK 488

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVSVYNALINGLCKEH 179
             + EM  +GC+PD V+Y T++  +C+  + +EA +L +R    G+ +     N +    
Sbjct: 489 LRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL 548

Query: 180 K-IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
           + +E+A  +L  ++  G  P    Y+T+I SLC   N+  +  +L  M   G  P+  + 
Sbjct: 549 RCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTV 608

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA-VSVSYQME 297
            +L+       +   A      M+R G  P+V  YSTL++ L   G   EA V +   + 
Sbjct: 609 DALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLIS 668

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
             SC P+   Y  LI  ++    +  A  +   + S     ++VAY  ++K L +     
Sbjct: 669 HTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQ 728

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
             + L+ +M       N  TFN  I+G C  G+ D A+++L +MK+    P+      L+
Sbjct: 729 MVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMKKV-LTPSAAIIKFLV 787

Query: 418 DGLLRVNRVKEAFELV 433
           D L R  R +E+ +LV
Sbjct: 788 DELARAEREQESKDLV 803



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 11/313 (3%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R+ F   V  Y+     L   G  +EA  +  +       P+  TY  LI G    G L 
Sbjct: 83  RQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLK 142

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  ++  M+  G  P V+    ++  LC++     A    EKM+     P   T+   I
Sbjct: 143 LACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMS---SIPCAATWTILI 199

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GL    RVD A    ++MK +  +PN  TY  +++GL++  +V EA  ++ E+      
Sbjct: 200 DGLFRAIRVDEACYYFEEMK-HTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVP--- 255

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
             +  Y +++ G C+AG + +A+ LL  M  +G + D +T+N +I+ +C+  +++ A +L
Sbjct: 256 -TLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYEL 314

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLVRSL 561
           L+ ++   ++ PDI +Y  L+ G+C +  + EA   L  + NE  C PN  ++N L+   
Sbjct: 315 LEEMK-SNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDG- 372

Query: 562 FSNLGHLGPVYIL 574
           FS    +   Y L
Sbjct: 373 FSKAARVNDAYQL 385


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 249/506 (49%), Gaps = 8/506 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD--GMEPNVFTYNILLKALCKNNRVD 117
           G +P    +N ++ A +A     +   +   M R      P+ F+YN+++  L ++ +  
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS--GVSVYNALI 172
            A K+  EM + G  P+ ++Y T++    K G +E     R+  +  G    +  YN L+
Sbjct: 212 DALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLL 271

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +GLC+  +++E   L+ EM    + P+  TYS +   L   G   T L +  +   +G  
Sbjct: 272 SGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
              ++ + LL G    G+  +A  +   ++  G +P  V Y+TLI+G C    +  A  +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QM+     P+  TY+ALI+G  K   +  A  +   M  +G  P+V  +  ++     
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +  +++  M  +    + ++F + +K  C  G++  A+ +LD M   +  PN   
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN ++D  +     ++AF LV +++  G+  +IVTYN +L G+CR+  + EA +L+  + 
Sbjct: 512 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G + D +++N II A C +G  + A++LL  +   G   P + +Y +L+  + ++G +
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG-IRPTLRTYHTLVSALASAGRV 630

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
            +     Q+ML++ + P+ + + ++V
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMV 656



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 247/511 (48%), Gaps = 14/511 (2%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++   N +L++LL   R + +   +  +   G  P+ F +N +++A      +D A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 123 LVEMGNKGCAP--DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV--------YNALI 172
           +  MG    AP  DA SY  +++ + + G+  +A ++   F   V +        YN +I
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKV---FDEMVDMGVVPNWITYNTMI 236

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +G  K   +E  F L  +M+  G  PN++TY+ ++S LC  G ++ +  ++ +M      
Sbjct: 237 DGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMF 296

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  +++ L  G    G +     L+   +++G +      S L++GLC +G + +A  V
Sbjct: 297 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQV 356

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              +      P    Y+ LI+G+ +  +L GA  I+ +M S    P+ + Y  ++  LC+
Sbjct: 357 LEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCK 416

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
             M  +A  L+ +M      P+  TFNT I      G+++    +L  M+Q     ++ +
Sbjct: 417 LEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           +  ++    +  ++ EA  ++ ++    +  N   YN+I+     +G   +AF L+ KM 
Sbjct: 477 FGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMK 536

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
             G     +T+N+++   C+  +++ A +L+  +R  G   PD++SY +++   CN G  
Sbjct: 537 NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDT 595

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            +A   LQ+M   GI P   T++ LV +L S
Sbjct: 596 DKALELLQEMNKYGIRPTLRTYHTLVSALAS 626



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 226/462 (48%), Gaps = 5/462 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VI    R G    ALK+F  + + G+ P    YN ++D  +          +   M  DG
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +PN+ TYN+LL  LC+  R+D    L+ EM +    PD  +Y+ +   + + G+     
Sbjct: 260 PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 319

Query: 156 EL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L   +++ G  +  Y  + L+NGLCK+ K+ +A  +L  +V  G+ P  + Y+T+I+  
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 379

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C V ++  +  I  QM  R   P+  ++ +L+ G        +A DL   M + G  P+V
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 439

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             ++TLI    + G +++  +V   M++     +V ++ +++  F K G +  A  I + 
Sbjct: 440 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 499

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           MI    +PN   Y  ++    ++    QA  L+EKM       + VT+N  +KGLC   +
Sbjct: 500 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 559

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A +L+  ++     P++ +YN ++          +A EL+ E+ K GI+  + TY+T
Sbjct: 560 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHT 619

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           ++  +  AG V +   L  +ML +  +  +  + I++ AY +
Sbjct: 620 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 661



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 199/450 (44%), Gaps = 40/450 (8%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+ + + G  E   ++  ++   G KP +  YN +L  L    R      +   M   
Sbjct: 234 TMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH 293

Query: 95  GMEPNVFTYNIL-----------------------------------LKALCKNNRVDGA 119
            M P+ FTY+IL                                   L  LCK+ +V  A
Sbjct: 294 SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKA 353

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALING 174
            ++L  + + G  P  V Y T+++  C++  +  A     ++  R      + YNALING
Sbjct: 354 EQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK   + +A  L+ EM   G+DP+V T++T+I +    G +E    +L  M  +G   +
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + SF S++K +   G+  EA  + + MI +   PN   Y+++I     +G  ++A  +  
Sbjct: 474 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVE 533

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+ +    ++ TY+ L+ G  ++  +  A ++   + + G  P+VV+Y  ++   C   
Sbjct: 534 KMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 593

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A  L+++M      P   T++T +  L   GRV     L  QM      P+ + Y 
Sbjct: 594 DTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYG 653

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            ++D  +R     +   L  E+ + GI  +
Sbjct: 654 IMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 172/383 (44%), Gaps = 38/383 (9%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ S   LL+  L  GR  +    +  ++  G  P+  A++ ++    + G +D A+++
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 293 SYQM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
             +M   E + PP+  +Y+ +I G  ++G    A ++++ M+  G  PN + Y  M+   
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +         L ++M  +   PN VT+N  + GLC  GR+D    L+D+M  +   P+ 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY+ L DGL R    +    L  E  K G+ L   T + +L+G+C+ G V +A Q+L  
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEM 359

Query: 471 MLIEG-----------------------------------TKLDAITFNIIIYAYCKQGK 495
           ++  G                                    + D IT+N +I   CK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V  A  L+  +   G  +P + ++ +L+     +G +++ F  L  M  +GI  +  ++ 
Sbjct: 420 VTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 556 VLVRSLFSNLGHLGPVYILDDIM 578
            +V++   N      V ILDD++
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMI 501



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G   +++    +L  M+ +G+      F SV+ ++ + G   +A+ +   +    
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 504

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P  ++YN I+DA +          +   MK  G+  ++ TYN+LLK LC+++++D A 
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L+  + N+G  PD VSY TI+S+ C  G  ++A E                        
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE------------------------ 600

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 LL EM   GI P + TY T++S+L   G V     +  QM  +   P+   +  
Sbjct: 601 ------LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGF 266
           ++  Y+      + + L   M  +G 
Sbjct: 655 MVDAYVRCENDSKVASLKKEMSEKGI 680



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 67/134 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L    +ID  + L+  ++ +G+      + ++I++    G  ++AL++   + ++G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PT++ Y+ ++ AL +  R   +  +Y  M    +EP+   Y I++ A  +        
Sbjct: 610 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 121 KLLVEMGNKGCAPD 134
            L  EM  KG A D
Sbjct: 670 SLKKEMSEKGIAFD 683


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 253/522 (48%), Gaps = 12/522 (2%)

Query: 65  VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLV 124
           V  YN ++  L    RFS    +   M+  G++ +  T+ I+LKALC+   VD A     
Sbjct: 4   VASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYFH 63

Query: 125 EMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG----VSVYNALINGLCKEHK 180
            +  +    D VSYTT++  +   G+++ A EL     S     V  Y A+IN L K H+
Sbjct: 64  SVSPRS-DLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVAYTAIINALFKAHR 122

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
            ++A      MV R  DP++ T++ +I+ LC  G +  +  +  +M  +G  P+I  +TS
Sbjct: 123 PDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTS 182

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+ G        EA  L   ++  G  P  V Y++ I GLC NG ++EA  +  +M +  
Sbjct: 183 LVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGK-M 241

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C   V     +  G+   G +  A  + + M+  G + +V  YT ++  L       +A 
Sbjct: 242 CAAEV--LHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQ 299

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            + E M  + C P+T T+   +   C  G++  A K+++ M       N   YN L+DG 
Sbjct: 300 EMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGF 359

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLD 479
           L VNR +EA  + + + +  ++ +IVTYN ++ G+C+ G   +A  +L +M   +G    
Sbjct: 360 LGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPT 419

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +++  +I+   K G+ + AI +   +   G   PD  S TSL+  +  +  M EA   L
Sbjct: 420 IVSYRTLIHGLGKAGRADEAIDVFTEMVDNG-VVPDCPSCTSLIQALAMADRMDEATQLL 478

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY-ILDDIMAN 580
           + M   GI P+   +N LV+ L      +GP + +L ++M N
Sbjct: 479 RDMPRMGITPDALAYNALVKVLCGG-AKVGPAWDVLVEMMDN 519



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 209/454 (46%), Gaps = 39/454 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   ID    L ++M   G  C    + ++IN+  +    +QA+  F R+    
Sbjct: 79  LIMGLADSGRIDVACELFEEMSSSGSQCVVA-YTAIINALFKAHRPDQAIACFERMVARK 137

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P ++ +  ++  L    + +    ++  M R G +P++  Y  L+  L K + +D A 
Sbjct: 138 CDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEAR 197

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS--GVSVYNALINGLCKE 178
           KLL E+ ++G  P  V+YT+ +S +CK G+VEEA +L    G      V + +  G   E
Sbjct: 198 KLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLE 257

Query: 179 HKIEEAFWLLCEMVDRGID-----------------------------------PNVITY 203
            KIEEA  L  EMV +G+                                    P+  TY
Sbjct: 258 GKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTY 317

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
             I+S  C  G ++ +  ++  M   G   N H + SL+ G+L   R  EA ++++ M+R
Sbjct: 318 GMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLR 377

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTYSALIDGFAKAGNLL 322
           +   P++V Y+ L+ GLC  G   +A  V  +M E +   P + +Y  LI G  KAG   
Sbjct: 378 KMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRAD 437

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A  ++  M+ NG  P+  + T +++ L   +   +A  L+  M      P+ + +N  +
Sbjct: 438 EAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALV 497

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           K LCG  +V  A  +L +M    C+P+ +T+  +
Sbjct: 498 KVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAM 531



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 235/496 (47%), Gaps = 17/496 (3%)

Query: 17  LLQQMKVEGVSCSE---GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           LL++M+  G+  S+   G+ +  +   + V   +QAL  F+ +        V  Y  ++ 
Sbjct: 26  LLKEMEALGIKKSQVTHGIILKALCERKEV---DQALSYFHSVSPRSDLDVVS-YTTLIM 81

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    R  +   ++  M   G +  V  Y  ++ AL K +R D A      M  + C P
Sbjct: 82  GLADSGRIDVACELFEEMSSSGSQ-CVVAYTAIINALFKAHRPDQAIACFERMVARKCDP 140

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D  ++T +++ +CK G++  A E+        +   + VY +L++GL K   ++EA  LL
Sbjct: 141 DLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLL 200

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            E+V RG+ P  +TY++ IS LC  G VE +  ++ +M        +H    +  GY+L 
Sbjct: 201 QEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHC---IFGGYVLE 257

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  EA  L + M+++G   +V  Y+ LIHGL      DEA  +   M    C P+  TY
Sbjct: 258 GKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTY 317

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
             ++  F K G +  A ++   M + G   N   Y  ++      N   +A ++   M  
Sbjct: 318 GMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLR 377

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE-CLPNITTYNELLDGLLRVNRVK 427
           +   P+ VT+N  + GLC  G+   A  +L +M++ +  +P I +Y  L+ GL +  R  
Sbjct: 378 KMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRAD 437

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA ++ TE+   G+  +  +  +++  +  A  + EA QLL  M   G   DA+ +N ++
Sbjct: 438 EAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALV 497

Query: 488 YAYCKQGKVNNAIQLL 503
              C   KV  A  +L
Sbjct: 498 KVLCGGAKVGPAWDVL 513



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 228/467 (48%), Gaps = 8/467 (1%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           +V +YNI+++ LC   R   AY+LL EM   G     V++  I+ ++C+  +V++A    
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             ++ R    V  Y  LI GL    +I+ A  L  EM   G    V+ Y+ II++L    
Sbjct: 63  HSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAH 121

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
             + ++    +M  R C+P++ +FT ++ G    G+ + A +++  M R+G+ P+++ Y+
Sbjct: 122 RPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYT 181

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           +L+ GL     MDEA  +  ++      P   TY++ I G  K G +  A ++   M   
Sbjct: 182 SLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM-GK 240

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
            C+  V+   C+           +A +L ++M  +    +   +   I GL    R D A
Sbjct: 241 MCAAEVL--HCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEA 298

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
            ++ + M +  C+P+  TY  ++    +  +++ A ++V  ++  G++ N   YN+++ G
Sbjct: 299 QEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDG 358

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
                   EA  +   ML +  K   +T+NI++   CK G+  +A  +L  +R      P
Sbjct: 359 FLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVP 418

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            I+SY +L+ G+  +G   EA     +M++ G+ P+  +   L+++L
Sbjct: 419 TIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQAL 465



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 157/356 (44%), Gaps = 44/356 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D  + LLQ++   G+  +E  + S I+   + G  E+A K+   +RE G
Sbjct: 183 LVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKL---VREMG 239

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                ++ + I    + E +      +   M + G+  +V  Y  L+  L    R D A 
Sbjct: 240 KMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQ 299

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQ------------------------------ 150
           ++   M  +GC PD  +Y  IVS  CK G+                              
Sbjct: 300 EMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGF 359

Query: 151 --VEEARE--------LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPN 199
             V  ARE        L       +  YN L+ GLCK  +  +A  +L EM +R GI P 
Sbjct: 360 LGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPT 419

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           +++Y T+I  L   G  + ++ +  +M   G  P+  S TSL++   +  R  EA+ L  
Sbjct: 420 IVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLR 479

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            M R G  P+ +AY+ L+  LC    +  A  V  +M +NSC P+ +T+ A+  GF
Sbjct: 480 DMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 3/226 (1%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V +Y  +++ LC    F +A+ L+++M       + VT    +K LC    VD A+   
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             +     L ++ +Y  L+ GL    R+  A EL  E+   G Q  +V Y  I++ + +A
Sbjct: 63  HSVSPRSDL-DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALFKA 120

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
               +A     +M+      D  TF ++I   CK GK+N A ++   +   G W PDII 
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKG-WKPDIIV 179

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           YTSL+ G+  +  M EA   LQ++++ G+ P   T+   +  L  N
Sbjct: 180 YTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKN 225



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 65/120 (54%), Gaps = 3/120 (2%)

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           L++ +YN ++ G+C AG    A++LL +M   G K   +T  II+ A C++ +V+ A+  
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSY 61

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              +    +   D++SYT+L+ G+ +SG +  A    ++M + G       +  ++ +LF
Sbjct: 62  FHSVSPRSDL--DVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALF 118


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 139/455 (30%), Positives = 227/455 (49%), Gaps = 40/455 (8%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P    YN +L  L    ++     +   M R+   PN  T+   ++A C+N  +D A +L
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVEL 64

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHK 180
           L +M   GC PD + Y+T+V+   + G+V+EA +L   M        YNA + GLC   +
Sbjct: 65  LEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGR 124

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG---------- 230
            EE   L+ EMV +   PN  T+ST+I+SLC    VE ++ +L QM   G          
Sbjct: 125 WEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNT 184

Query: 231 ----------------------CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
                                 C P+  SF ++LK      R ++A +L  +M+++    
Sbjct: 185 IISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRI 244

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           N + ++ LI  LC NG + +A+ V   M +  C P++ TYS+LI+GF++ G    A  ++
Sbjct: 245 NEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLF 304

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M    C  ++ +Y   +K LC    +  A  LI  M  E+C PN VTFN  I  LC  
Sbjct: 305 RSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQK 361

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G V+ A+ + +QM +Y   P+I TYN L++G     R+ +A + ++ +     + + ++Y
Sbjct: 362 GLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISY 418

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           N+IL G+CRA    +A +L+ +ML +    + +TF
Sbjct: 419 NSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 226/435 (51%), Gaps = 18/435 (4%)

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFW 186
           APD  +Y T++  +C   Q E+A EL               +   I   C+   ++ A  
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           LL +M   G  P+VI YST+++   + G V+ +L +L  M    C PN   + + LKG  
Sbjct: 64  LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLC 120

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           + GR  E  +L   M+R+   PN   +STLI+ LC N  ++ AV V  QM++    P+V 
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           +Y+ +I  F+       A ++   M+   C P+ +++  ++K LC+   ++ A  L+ KM
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKM 237

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             ++C  N +TFN  I  LC  G+V  A+++ + M +Y C+P+I TY+ L++G       
Sbjct: 238 LKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLD 297

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           + AF+L   +     + +I +YN  L G+C A    +A +L+  M+ E    + +TFNI+
Sbjct: 298 EMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 354

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           I + C++G VN AI + +++   G   PDI +Y +L+ G    G + +A  +L  M  E 
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYG-ITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE- 412

Query: 547 ICPNFATWNVLVRSL 561
             P+  ++N +++ L
Sbjct: 413 --PDTISYNSILKGL 425



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 238/488 (48%), Gaps = 70/488 (14%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+ +TYN +LK LC   + + A +L+ EM    C P+ V++ T + + C+          
Sbjct: 5   PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQ---------- 54

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
                          NGL     ++ A  LL +M   G  P+VI YST+++   + G V+
Sbjct: 55  ---------------NGL-----LDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVD 94

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +L  M    C PN   + + LKG  + GR  E  +L   M+R+   PN   +STLI
Sbjct: 95  EALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLI 151

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           + LC N  ++ AV V  QM++    P+V +Y+ +I  F+       A ++   M+   C 
Sbjct: 152 NSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CK 208

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P+ +++  ++K LC+   ++ A  L+ KM  ++C  N +TFN  I  LC  G+V  A+++
Sbjct: 209 PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEV 268

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            + M +Y C+P+I TY+ L++G       + AF+L   +     + +I +YN  L G+C 
Sbjct: 269 FELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCM 325

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR------------ 505
           A    +A +L+  M+ E    + +TFNI+I + C++G VN AI + ++            
Sbjct: 326 AARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFT 385

Query: 506 ----IRGGGEW---------------NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
               I G  E                 PD ISY S+L G+C +   ++A   + +ML + 
Sbjct: 386 YNALINGYSEQGRLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKN 445

Query: 547 ICPNFATW 554
             PN  T+
Sbjct: 446 CTPNEVTF 453



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 195/402 (48%), Gaps = 40/402 (9%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    LL+QM   G +    ++ +++N +   G  ++ALK+   +     +P    YN 
Sbjct: 58  LDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL---LNTMLCRPNTVCYNA 114

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            L  L    R+  +  + + M R    PN  T++ L+ +LC+N  V+ A ++L +M   G
Sbjct: 115 ALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYG 174

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
             PD VSY TI+S      + ++A +L  +M        +NA++  LCK  +  +A  L+
Sbjct: 175 YMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELV 234

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL------- 241
            +M+ +    N +T++ +I SLC  G V+ ++ +   M    C P+I +++SL       
Sbjct: 235 AKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQ 294

Query: 242 -------------------------LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                                    LKG  +  R  +A +L   M+ E  LPN V ++ L
Sbjct: 295 GLDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNIL 354

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I  LC  G ++ A+ V  QM +    P++ TY+ALI+G+++ G L  A +  + M    C
Sbjct: 355 ISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PC 411

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
            P+ ++Y  ++K LC+   +  A  L+ +M  +NC PN VTF
Sbjct: 412 EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 181/366 (49%), Gaps = 10/366 (2%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+  TY+T++  LC     E +  ++ +M    C+PN  +F + ++ +   G    A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L  +M + G  P+V+ YSTL++G   +G +DEA+ +   M    C PN   Y+A + G 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGL 119

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
             AG      ++   M+   C PN   ++ ++  LCQN +   A  ++E+M      P+ 
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           V++NT I       R D A+KLL  M    C P+  ++N +L  L +  R  +A ELV +
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + K   ++N +T+N ++  +C+ G V +A ++   M       D +T++ +I  + +QG 
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGL 296

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
              A  L   +        DI SY + L G+C +    +A   +  M+ E   PN  T+N
Sbjct: 297 DEMAFDLFRSMPCRA----DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFN 352

Query: 556 VLVRSL 561
           +L+ SL
Sbjct: 353 ILISSL 358


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/561 (27%), Positives = 266/561 (47%), Gaps = 45/561 (8%)

Query: 35  SVINSYRRVGLAEQALKMFY-RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           S+I+ +   GL    + + Y ++   G+ P V   N ++ +L    + S      S ++ 
Sbjct: 98  SLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFA---ISLLRN 154

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
             +  +  TYN ++  LC++   D AY+ L EM   G  PD VS+ T++   CK+G    
Sbjct: 155 RVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFAR 214

Query: 154 ARELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           A+ L        +  +  LI+     H IEEA+    +MV  G DP+V+T+S+II+ LC 
Sbjct: 215 AKALVDEISELNLITHTILISSYYNLHAIEEAYR---DMVMSGFDPDVVTFSSIINRLCK 271

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G V     +L +M   G  PN  ++T+L+           A  L+++M+  G   ++V 
Sbjct: 272 DGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVV 331

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ L+ GL   G + EA      + E++  PNV TY+AL+DG  KAG+L  A  I  +M+
Sbjct: 332 YTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                PNVV Y+ M+    +  M  +A SL+ KM  +N  PN  T+ T I GL   G+ +
Sbjct: 392 EKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQE 451

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL--------- 443
            A ++  +M+      N    + L++ L R+ R+KE   LV ++   G+ L         
Sbjct: 452 VASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLI 511

Query: 444 --------------------------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
                                     ++V+YN ++ G+ + G V   +   G M  +G +
Sbjct: 512 DVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWAYKG-MREKGIE 570

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D  TFNI++ +  KQG     ++L D+++  G   P ++    ++  +C  G M+EA  
Sbjct: 571 PDIATFNIMMNSQRKQGDFEGILKLWDKMKSCG-IKPSLMICNIVVGMLCEKGKMKEAID 629

Query: 538 YLQKMLNEGICPNFATWNVLV 558
            L +M+   I PN  T+ + +
Sbjct: 630 ILDQMMFMEIHPNLTTYRIFL 650



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/553 (25%), Positives = 255/553 (46%), Gaps = 7/553 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +  ++   + M + G       F S+IN   + G   +   +   + E G+ P    Y  
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTT 299

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D+L     +     +YS M   G+  ++  Y +L+  L K   +  A K    +    
Sbjct: 300 LVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDN 359

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
             P+ V+YT +V  +CK G +  A     + L       V  Y+++ING  K+  +EEA 
Sbjct: 360 EVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAV 419

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+ +M D+ + PN  TY T+I  L   G  E +  +  +M + G   N +   +L+   
Sbjct: 420 SLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHL 479

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  E   L   M+ +G   + + Y++LI      G  + A+S + +M+E   P +V
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDV 539

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            +Y+ LI G  K G  +GA   +  M   G  P++  +  M+    +   F     L +K
Sbjct: 540 VSYNVLISGLLKFGK-VGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDK 598

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      P+ +  N  +  LC  G++  A+ +LDQM   E  PN+TTY   LD   +  R
Sbjct: 599 MKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKR 658

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
               F+    +   GI+L+   YNT++  +C+ GM  +A  ++  M   G   D +TFN 
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNA 718

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +++ Y     V  A+     +   G  +P++ +Y +++ G+ ++G ++E   +L +M + 
Sbjct: 719 LMHGYFVGSHVGKALSTYSMMMEAG-ISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSR 777

Query: 546 GICPNFATWNVLV 558
           G+ P+  T+N L+
Sbjct: 778 GMRPDDFTYNALI 790



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/623 (23%), Positives = 273/623 (43%), Gaps = 74/623 (11%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C++  + + +  ++   +S     + +VI+     GLA++A +    + + G+ P    +
Sbjct: 140 CKVGQLSFAISLLRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSF 199

Query: 69  NHILDALLAENRFS----------------------------MINPIYSNMKRDGMEPNV 100
           N ++D       F+                             I   Y +M   G +P+V
Sbjct: 200 NTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDV 259

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RE 156
            T++ ++  LCK+ +V     LL EM   G  P+ V+YTT+V S+ K      A     +
Sbjct: 260 VTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQ 319

Query: 157 LAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           + +R     + VY  L+ GL K   + EA      +++    PNV+TY+ ++  LC  G+
Sbjct: 320 MVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGD 379

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           + ++  I+ QM  +   PN+ +++S++ GY+  G   EA  L  +M  +  +PN   Y T
Sbjct: 380 LSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGT 439

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +I GL   G  + A  +S +M       N     AL++   + G +     +   M+S G
Sbjct: 440 VIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV--DW 393
            + + + YT ++ V  +      A S  E+M  +  P + V++N  I GL   G+V  DW
Sbjct: 500 VTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADW 559

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A K    M++    P+I T+N +++   +    +   +L  +++ CGI+ +++  N ++ 
Sbjct: 560 AYK---GMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVG 616

Query: 454 GVCRAGMVVEAFQLLGKMLI-----------------------------------EGTKL 478
            +C  G + EA  +L +M+                                     G KL
Sbjct: 617 MLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKL 676

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
               +N +I   CK G    A  +++ +   G + PD +++ +L+ G      + +A   
Sbjct: 677 SRQVYNTLIATLCKLGMTRKAAMVMEDMEARG-FVPDTVTFNALMHGYFVGSHVGKALST 735

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
              M+  GI PN AT+N ++R L
Sbjct: 736 YSMMMEAGISPNVATYNTIIRGL 758



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 247/552 (44%), Gaps = 42/552 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  QM V G+     V+  ++    + G   +A K F  + E    P V  Y  ++D L 
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLC 375

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                S    I + M    + PNV TY+ ++    K   ++ A  L+ +M ++   P+  
Sbjct: 376 KAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGF 435

Query: 137 SYTTIVSSICKLGQVEEARELA--MRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           +Y T++  + K G+ E A E++  MR   GV     + +AL+N L +  +I+E   L+ +
Sbjct: 436 TYGTVIDGLFKAGKQEVASEMSKEMRL-IGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSL----------------------------GI 222
           MV +G+  + I Y+++I      G+ E +L                            G 
Sbjct: 495 MVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGK 554

Query: 223 LGQ------MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +G       M  +G  P+I +F  ++      G       LW++M   G  P+++  + +
Sbjct: 555 VGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIV 614

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  LC  G M EA+ +  QM      PN+TTY   +D  +K        +    ++S G 
Sbjct: 615 VGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGI 674

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             +   Y  ++  LC+  M  +A  ++E M      P+TVTFN  + G      V  A+ 
Sbjct: 675 KLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALS 734

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
               M +    PN+ TYN ++ GL     +KE  + ++E++  G++ +  TYN ++ G  
Sbjct: 735 TYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQA 794

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G   E+  +  +M+ +G      T+N++I  + K GK+  A +L+  + G    +P+ 
Sbjct: 795 KIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEM-GKRRVSPNT 853

Query: 517 ISYTSLLWGICN 528
            +Y +++ G+C 
Sbjct: 854 STYCTMISGLCK 865



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 130/559 (23%), Positives = 243/559 (43%), Gaps = 60/559 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++   ++++ QM  + V  +   + S+IN Y + G+ E+A+ +  ++ +  
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQN 429

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    Y  ++D L    +  + + +   M+  G+E N +  + L+  L +  R+    
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVK 489

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
            L+ +M +KG   D ++YT+++    K G  E A   A           V  YN LI+GL
Sbjct: 490 GLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGL 549

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS-------------------------- 209
            K  K+  A W    M ++GI+P++ T++ +++S                          
Sbjct: 550 LKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSL 608

Query: 210 ---------LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
                    LC+ G ++ ++ IL QM     +PN+ ++   L       R          
Sbjct: 609 MICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHET 668

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           ++  G   +   Y+TLI  LC  G   +A  V   ME     P+  T++AL+ G+    +
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSH 728

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A   ++ M+  G SPNV  Y  +++ L    +  +    + +M      P+  T+N 
Sbjct: 729 VGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNA 788

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G    G    +M +  +M     +P  +TYN L+    +V ++ +A EL+ E+ K  
Sbjct: 789 LISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRR 848

Query: 441 IQLNIVTYNTILHGVC------------RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           +  N  TY T++ G+C            +A  + EA  LL +M+ E      I +N  IY
Sbjct: 849 VSPNTSTYCTMISGLCKLCTHPEVEWNKKAMYLAEAKGLLKEMIEEK---GYIPYNQTIY 905

Query: 489 ----AYCKQGKVNNAIQLL 503
               A+ K G   +A + L
Sbjct: 906 WISAAFSKPGMKVDAERFL 924



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 129/259 (49%), Gaps = 12/259 (4%)

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI- 363
           V+ +  L   +   G L GA++  + M + G  P++  +  ++     N + H   SL+ 
Sbjct: 58  VSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVY 117

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            KM      P+    N  I  LC  G++ +A+ LL   +      +  TYN ++ GL   
Sbjct: 118 SKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLL---RNRVISVDTVTYNTVISGLCEH 174

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
               EA++ ++E+ K GI  + V++NT++ G C+ G    A  L+     E ++L+ IT 
Sbjct: 175 GLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVD----EISELNLITH 230

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            I+I +Y     +  A +  D +  G  ++PD+++++S++  +C  G + E  + L++M 
Sbjct: 231 TILISSYYNLHAIEEAYR--DMVMSG--FDPDVVTFSSIINRLCKDGKVMEGGLLLREME 286

Query: 544 NEGICPNFATWNVLVRSLF 562
             G+ PN  T+  LV SLF
Sbjct: 287 EMGVYPNHVTYTTLVDSLF 305


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 265/538 (49%), Gaps = 10/538 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ +VI  +  + + E AL  +   ++ G++  +++ N +L  L+  N+      ++ +M
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVE--LQVCNFLLKRLVEGNQIMYARSLFDDM 202

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN--KGCAPDAVSYTTIVSSICKLG 149
           K  G  PNV++Y++L+       ++     L +      +G  P+A +Y T +  +C   
Sbjct: 203 KSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAK 262

Query: 150 QVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           QV+ A    + L  R +      +NA+I+G C + ++ +A  +   M   G  P+V +YS
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYS 322

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            ++  LC  G+V T   +L +M   G  PN+ S++SLL G    GR   A +L+ R+  +
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  + + YS ++HG C +  ++    +   M  ++  P+   YS+LI  + +   L  A
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++  M+S+G  PNVV  T +V       +  +A   ++K+      P+  T+   I G
Sbjct: 443 LEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHG 502

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC   + +    +   M +   +P+   Y+ ++DG ++   ++EAF L  ++   G + N
Sbjct: 503 LCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPN 562

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           I TY ++++G+C    + E   L   M+ EG   D I +  +I  YCK+  +  A+++  
Sbjct: 563 IFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFR 622

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +   G  + D   YT L+ G      M  A +++++M+N+G+ P   T+  L+   F
Sbjct: 623 EMETEG-LSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYF 679



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 201/463 (43%), Gaps = 33/463 (7%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N ++     + +      ++  MK+ G  P+V +Y+IL+  LCK   V   Y +LVEM 
Sbjct: 286 FNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
             G  P+ VSY++                              L++GLC+  ++E AF L
Sbjct: 346 RNGITPNLVSYSS------------------------------LLHGLCRAGRVELAFEL 375

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
              + D+G   + I YS ++   C   ++E    +   M      P+ ++++SL+  Y  
Sbjct: 376 FKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCR 435

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             +  EA +++  M+ +G  PNVV  + L+HG  + G + EA     ++ +    P++ T
Sbjct: 436 HRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCT 495

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y  +I G  K         I+  MI  G  P+ V Y+ ++    +     +A  L  KM 
Sbjct: 496 YRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMV 555

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            E   PN  T+ + I GLC   ++   M L   M      P+   Y  L+    + + +K
Sbjct: 556 DEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMK 615

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            A E+  E+E  G+  +   Y  ++ G  +   +  A   + +M+ +G     +T+  +I
Sbjct: 616 AALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLI 675

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
             Y K G    A+ + + +   G   PD  +  S + G+ N G
Sbjct: 676 VGYFKIGDEKKAMAMYNSMLQAG-IAPD--AKLSCILGLGNDG 715



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 3/222 (1%)

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC-GCGRVDWAMKLLDQMKQY 404
           ++K L + N    A SL + M      PN  +++  +     G          L    + 
Sbjct: 182 LLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEV 241

Query: 405 ECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
           E + PN  TY   L GL    +VK A+  +  + + G   N   +N ++HG C  G V +
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A ++   M   G   D  +++I++   CKQG V     +L  +   G   P+++SY+SLL
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG-ITPNLVSYSSLL 360

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
            G+C +G ++ AF   +++ ++G   +   +++++     +L
Sbjct: 361 HGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHL 402



 Score = 42.7 bits (99), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 7/171 (4%)

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL----HGVCRAGMVVEAFQLLG 469
           N LL  L+  N++  A  L  +++  G   N+ +Y+ ++    HG      + EA +LL 
Sbjct: 180 NFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGA--KLCLEEALELLS 237

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M +EG + +A T+   +Y  C   +V +A   L  +   G +  +   + +++ G C+ 
Sbjct: 238 EMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRG-YPCNNYCFNAVIHGFCHD 296

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           G + +A      M   G  P+  ++++LV  L      L   Y+L ++  N
Sbjct: 297 GQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARN 347


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 254/526 (48%), Gaps = 8/526 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD- 94
           ++ S   VG        F  +   G +P    +N  + A +A         +   M R  
Sbjct: 129 LLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSE 188

Query: 95  -GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
               P+ F+YN+++  L ++ +   A K+  EM ++G AP+ ++Y T++    K G +E 
Sbjct: 189 GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEA 248

Query: 154 A---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
               R+  ++ G    V  YN L++GLC+  +++E   L+ EM    + P+  TYS +  
Sbjct: 249 GFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFD 308

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
            L   G+  T L + G+   +G     ++ + LL G    G+  +A  +   ++  G +P
Sbjct: 309 GLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVP 368

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
               Y+TLI+G C    +  A S+  QM+     P+  TY+ALI+G  K   +  A  + 
Sbjct: 369 TTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLV 428

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M  +G  P+V  +  ++    +     +  +++  M  +    N ++F + +K  C  
Sbjct: 429 MEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKN 488

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G++  A+ +LD M   + +PN   YN ++D  +     ++AF LV +++  G+  +I TY
Sbjct: 489 GKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTY 548

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           N +L G+C+   + EA +L+  +  +G + D +++N II A C +G  + A++LL  +  
Sbjct: 549 NLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMH- 607

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
             +  P + +Y  LL  + ++G + +     Q M+++ + P+ + +
Sbjct: 608 KYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 234/472 (49%), Gaps = 39/472 (8%)

Query: 98  PNVFTYNILLKALCKNNR---VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           P++ + N+LL++L    R   V  A+ LLV  G +   PD  ++   V +    G ++EA
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGAR---PDTFAWNKAVQACVAAGDLDEA 177

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
             +  R G                              +    P+  +Y+ +I+ L   G
Sbjct: 178 LAMLRRMGRS----------------------------EGAPPPDAFSYNVVIAGLWRSG 209

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
               +L +  +M  RG  PN  ++ +++ G++ GG       L ++M+++G  PNVV Y+
Sbjct: 210 KGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYN 269

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            L+ GLC  G MDE  ++  +M   S  P+  TYS L DG  + G+      ++   +  
Sbjct: 270 VLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKK 329

Query: 335 GCSPNVVAYTCMVKV--LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           G    + AYTC + +  LC++    +A  ++E +      P T  +NT I G C    + 
Sbjct: 330 GVI--IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQ 387

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A  + +QMK     P+  TYN L++GL ++  + EA +LV E+EK G+  ++ T+NT++
Sbjct: 388 GAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLI 447

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
               RAG + + F +L  M  +G K + I+F  ++ A+CK GK+  A+ +LD +    + 
Sbjct: 448 DAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHK-DV 506

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            P+   Y S++     SGG ++AF+ ++KM + G+  +  T+N+L++ L  N
Sbjct: 507 VPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKN 558



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/479 (23%), Positives = 210/479 (43%), Gaps = 44/479 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +M   GV+ ++  + ++I+ + + G  E   ++  ++ + G KP V  YN +L  L 
Sbjct: 217 VFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLC 276

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNIL------------------------------ 106
              R      +   M    M P+ FTY+IL                              
Sbjct: 277 RAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAY 336

Query: 107 -----LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
                L  LCK+ +V  A ++L  + + G  P    Y T+++  C++  ++ A  +  + 
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396

Query: 162 GS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
            S         YNALINGLCK   I EA  L+ EM   G+DP+V T++T+I +    G +
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL 456

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E    +L  M  +G   N+ SF S++K +   G+  EA  + + MI +  +PN   Y+++
Sbjct: 457 EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSI 516

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I     +G  ++A  +  +M+ +    ++ TY+ L+ G  K   +  A ++   + + G 
Sbjct: 517 IDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGL 576

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV+Y  ++   C      +A  L+++M   +  P   T++  +  L   GRV     
Sbjct: 577 RPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMEC 636

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE----LVTEIEKCGIQLNIVTYNTI 451
           L   M      P+ + Y    +   +V  +K+          + E+  ++L+ +  + I
Sbjct: 637 LYQHMVHKNVEPSSSIYGTRCENESKVASLKKEMSEKGIAFDDTERTNLELDRIIASPI 695



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 177/388 (45%), Gaps = 38/388 (9%)

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           VR   P++ S   LL+  L  GR  +    +  ++  G  P+  A++  +    + G +D
Sbjct: 116 VRSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLD 175

Query: 288 EAVSVSYQM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           EA+++  +M   E + PP+  +Y+ +I G  ++G    A ++++ M+  G +PN + Y  
Sbjct: 176 EALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNT 235

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           M+    +         L ++M  +   PN VT+N  + GLC  GR+D    L+D+M  Y 
Sbjct: 236 MIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYS 295

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            LP+  TY+ L DGL R    +    L  E  K G+ +   T + +L+G+C+ G V +A 
Sbjct: 296 MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAE 355

Query: 466 QLLGKMLIEG-----------------------------------TKLDAITFNIIIYAY 490
           Q+L  ++  G                                    + D IT+N +I   
Sbjct: 356 QVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGL 415

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK   +  A  L+  +   G  +P + ++ +L+     +G +++ F  L  M ++GI  N
Sbjct: 416 CKMEMITEAEDLVMEMEKSG-VDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSN 474

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIM 578
             ++  +V++   N      V ILDD++
Sbjct: 475 VISFGSVVKAFCKNGKIPEAVAILDDMI 502



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 114/232 (49%), Gaps = 5/232 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G   +++    +L  M+ +G+  +   F SV+ ++ + G   +A+ +   +    
Sbjct: 446 LIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKD 505

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P  ++YN I+DA +          +   MK  G+  ++FTYN+LLK LCKN+++D A 
Sbjct: 506 VVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAE 565

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L+  + N+G  PD VSY TI+S+ C  G  + A EL            +  Y+ L++ L
Sbjct: 566 ELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSAL 625

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
               ++ +   L   MV + ++P+   Y T   +   V +++  +   G  F
Sbjct: 626 GSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKKEMSEKGIAF 677


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 144/597 (24%), Positives = 286/597 (47%), Gaps = 58/597 (9%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN---HILDALLAENRFSMINPI 87
           G + ++++++ R G    A+ +F R+ + G++P +  YN   H+   +     +  +  +
Sbjct: 173 GAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVP--WKEVVEL 230

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
            ++MK  G+ P+ +TYN L+    +      A ++  EM   G  PD V++ +++    K
Sbjct: 231 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290

Query: 148 LGQVEEARELAM---RFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
             + +EA E+     R G   SV  YN+LI+   K+  +E+A  L  EM  +G+ P+V+T
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 350

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+T+IS L   G ++ ++    +M   GC PN+ ++ +L+K + + G+  E   +++   
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 410

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             GF+P++V ++TL+     NG   E   V  +M++    P   TY +LI  +++ G   
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 470

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A QI+ RM+  G  P+V  Y  ++  L +   + QA  L  +M   +C P+  ++++ +
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530

Query: 383 KGLCGCGRVD------------------WAMKLLD-----------------QMKQYECL 407
                  R+D                  W +K L                  +++Q  C 
Sbjct: 531 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 590

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            +I   N ++    +   V++  ++++ +++  I L+  TYN+++H   R G   +   +
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L ++   G + D  ++N +IYAY ++G++  A +L   ++  G   PD+++Y   +    
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG-LKPDVVTYNIFVKSYV 709

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLV------------RSLFSNLGHLGPVY 572
           ++   +EA   ++ M+ +G  PN  T+N +V            +   SNL  L P Y
Sbjct: 710 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGY 766



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 252/532 (47%), Gaps = 8/532 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  MK  GV+     + ++I+  RR  L ++A ++F  ++  G +P    +N +LD   
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   M+R G  P+V TYN L+ +  K+  ++ A  L  EM  KG  PD V
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349

Query: 137 SYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT++S + + G+++ A    +  +R G    +  YNALI       K  E   +  E 
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 409

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P+++T++T+++     G      G+  +M   G  P   ++ SL+  Y   G  
Sbjct: 410 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 469

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ RM+  G  P+V  Y+ ++  L   G  ++A  +  +MEE  C P+  +YS+L
Sbjct: 470 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 529

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +  +A A  L     + + + S    P+      +V V  + N   +A     ++  + C
Sbjct: 530 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 589

Query: 372 PPNTVTFNTFIKGLCGCGR-VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             +    N  +  + G  R V    K+L  MK+     +  TYN L+    R+   ++  
Sbjct: 590 SLDINVLNAMV-SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++TEI+  G++ +  +YNT+++   R G + EA +L  +M   G K D +T+NI + +Y
Sbjct: 649 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSY 708

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
                   AI+L+  +   G   P+  +Y S++ G C +G + +A I++  +
Sbjct: 709 VSNSMFEEAIELVRYMVTQG-CKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 220/499 (44%), Gaps = 30/499 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++  G+    D    ++Q+M+  G   S   + S+I+SY + GL EQA+ +   +   G
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 343

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  Y  ++  L    +       Y  M R+G +PN+ TYN L+K      +     
Sbjct: 344 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 403

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  E  + G  PD V++ T+++                 FG          NGL     
Sbjct: 404 AVFDEFRSAGFVPDIVTWNTLLAV----------------FGQ---------NGLD---- 434

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             E   +  EM   G  P   TY ++ISS    G  + ++ I  +M   G  P++ ++ +
Sbjct: 435 -SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 493

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L     GGR  +A  L+  M      P+  +YS+L+H   +   +D+  ++S  +    
Sbjct: 494 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+      L+   +K  NL  A + +  +    CS ++     MV +  +N M  +  
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE 613

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++  M       +  T+N+ +      G  +    +L ++K     P+  +YN ++   
Sbjct: 614 KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY 673

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R  ++KEA  L +E++  G++ ++VTYN  +       M  EA +L+  M+ +G K + 
Sbjct: 674 GRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNE 733

Query: 481 ITFNIIIYAYCKQGKVNNA 499
            T+N I+  YC+ GK+ +A
Sbjct: 734 RTYNSIVEGYCRNGKLTDA 752



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 196/439 (44%), Gaps = 5/439 (1%)

Query: 139 TTIVSSICKLGQVEEAREL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
            T +  + + G++ EA  L     G     Y AL++   +  +  +A  +   MVD G+ 
Sbjct: 145 ATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQ 204

Query: 198 PNVITYSTIISSLCDVG-NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           P ++TY+ ++     +    +  + ++  M   G  P+ +++ +L+          EA+ 
Sbjct: 205 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 264

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +++ M   GF P+ V +++L+         DEA+ V  +ME   CPP+V TY++LI  + 
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G L  A  +   M   G  P+VV YT ++  L +      A    ++M    C PN  
Sbjct: 325 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+N  IK     G+    M + D+ +    +P+I T+N LL    +     E   +  E+
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 444

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +K G      TY +++    R G+   A Q+  +M+  G   D  T+N ++ A  + G+ 
Sbjct: 445 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 504

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN--FATW 554
             A +L   +    +  PD  SY+SLL    N+  + +       + +E I P+      
Sbjct: 505 EQAEKLFAEME-ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 563

Query: 555 NVLVRSLFSNLGHLGPVYI 573
            VLV S  +NL      ++
Sbjct: 564 LVLVNSKVNNLAEAEKAFL 582



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 194/430 (45%), Gaps = 46/430 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+M+V+G+      + ++I+   R G  + A+  +  +   G KP +  YN ++    
Sbjct: 335 LKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHG 394

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMGNKGCAP 133
              +F  +  ++   +  G  P++ T+N LL    +N   + V G +K   EM   G  P
Sbjct: 395 VRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFK---EMKKAGYIP 451

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLL 188
           +  +Y +++SS  + G  + A ++  R         VS YNA+++ L +  + E+A  L 
Sbjct: 452 ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 511

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN-------------I 235
            EM +R   P+  +YS+++ +  +   ++    +   ++     P+             +
Sbjct: 512 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKV 571

Query: 236 HSFTSLLKGYLLGGRTHEASDL-----------WNRMIR--EGFLP---------NVVAY 273
           ++     K +L   +   + D+            NRM+R  E  L          +   Y
Sbjct: 572 NNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATY 631

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++L+H     G  ++  ++  +++ +   P+  +Y+ +I  + + G +  AS++++ M  
Sbjct: 632 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 691

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G  P+VV Y   VK    N+MF +A  L+  M  + C PN  T+N+ ++G C  G++  
Sbjct: 692 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 751

Query: 394 AMKLLDQMKQ 403
           A   +  + Q
Sbjct: 752 AKIFVSNLPQ 761



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 8/297 (2%)

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTYSALIDGFAKAGNLL 322
           EG L +    +T I  +   G + EA ++      ++ P P+   Y+AL+  F++AG   
Sbjct: 135 EGVLHHPRVLATAIRVMARAGRLAEASALL-----DAAPGPDAGAYTALVSAFSRAGRFR 189

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM-FHQAHSLIEKMAFENCPPNTVTFNTF 381
            A  ++ RM+ +G  P +V Y  ++ V  +  + + +   L+  M      P+  T+NT 
Sbjct: 190 DAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTL 249

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I           A ++ D+MK     P+  T+N LLD   +  R  EA E++ E+E+ G 
Sbjct: 250 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 309

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++VTYN+++    + G++ +A  L  +M ++G K D +T+  +I    + GK++ AI 
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 369

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             D +   G   P++ +Y +L+      G   E      +  + G  P+  TWN L+
Sbjct: 370 EYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 425



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 84/155 (54%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+   G+   +  V+ +L  MK   ++ S   + S+++ Y R+G  E+   +   I+  G
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 658

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++ A   + +    + ++S MK  G++P+V TYNI +K+   N+  + A 
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 718

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +L+  M  +GC P+  +Y +IV   C+ G++ +A+
Sbjct: 719 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/483 (26%), Positives = 235/483 (48%), Gaps = 8/483 (1%)

Query: 91  MKRDGMEP-NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           M RDG  P N F+YN+++  + +  R   A ++  EM  +   P+ ++Y T++    K G
Sbjct: 5   MGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG 64

Query: 150 QVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            +E    L  +            YN L++GLC+  ++ E   LL EM  + + P+  TYS
Sbjct: 65  DLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYS 124

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
            +   L   G+ +  L + G+    G     ++ + LL G    G+   A ++   ++  
Sbjct: 125 ILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA 184

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G +P  V Y+TLI+G C  G ++ A S   QM+     P+  TY+ALI+G  KA  +  A
Sbjct: 185 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 244

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
             +   M  NG +P V  +  ++    +     +   ++ +M      PN V++ + +  
Sbjct: 245 QDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNA 304

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G++  A+ +LD M   + LPN   YN ++D  +      +AF LV +++  GI  +
Sbjct: 305 FCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPS 364

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           IVTYN ++ G+C    + EA +++  +       DA+++N +I A C +G ++ A+ L  
Sbjct: 365 IVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQ 424

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           R+   G     + +Y  L+ G+  +G + E     QKM+   + P+ A  N++V + +S 
Sbjct: 425 RMHKYG-IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA-YSK 482

Query: 565 LGH 567
            G+
Sbjct: 483 YGN 485



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 41/497 (8%)

Query: 17  LLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           +L++M  +G        +  VI    R G    A+++F  + E  + P    YN ++D  
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
           +          +   M   G++PN  TYN+LL  LC+  R+     LL EM ++   PD 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 136 VSYTTI-----------------------------------VSSICKLGQVEEARE-LAM 159
            +Y+ +                                   ++ +CK G+V  A E L  
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 160 RFGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
              +G+     +YN LING C+  ++E AF    +M  R I P+ ITY+ +I+ LC    
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  +  +L +M   G NP + +F +L+  Y   G+  +   + + M   G  PNVV+Y +
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +++  C NG + EAV++   M      PN   Y+A+ID + + G    A  +  +M SNG
Sbjct: 301 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            SP++V Y  ++K LC  +   +A  +I  ++     P+ V++NT I   C  G +D A+
Sbjct: 361 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 420

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            L  +M +Y     + TY++L+ GL    R+ E   L  ++ +  +  +   +N ++   
Sbjct: 421 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 480

Query: 456 CRAGMVVEAFQLLGKML 472
            + G  ++A  L  +ML
Sbjct: 481 SKYGNEIKAEDLRKEML 497



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 211/478 (44%), Gaps = 40/478 (8%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R+    P    YN ++  +    R      ++  M    + PN  TYN ++    K   +
Sbjct: 7   RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 66

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS------------- 163
           +  ++L  +M   G  P+A++Y  ++S +C+ G++ E   L     S             
Sbjct: 67  EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 126

Query: 164 -----------------------GVSVYN----ALINGLCKEHKIEEAFWLLCEMVDRGI 196
                                  GV++ +     L+NGLCK+ K+  A  +L  +V+ G+
Sbjct: 127 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 186

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P  + Y+T+I+  C  G +E +    GQM  R   P+  ++ +L+ G     R   A D
Sbjct: 187 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 246

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           L   M   G  P V  ++TLI      G +++   V  +M+EN   PNV +Y ++++ F 
Sbjct: 247 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFC 306

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G +  A  I + M      PN   Y  ++    ++    QA  L+EKM      P+ V
Sbjct: 307 KNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIV 366

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+N  IKGLC   ++  A ++++ +  +  +P+  +YN L+        + +A +L   +
Sbjct: 367 TYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRM 426

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            K GI+  + TY+ ++ G+  AG + E   L  KM+           NI++ AY K G
Sbjct: 427 HKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 179/392 (45%), Gaps = 5/392 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL +M  + +      +  + +   R G ++  L +F +  + G+       + +L+ L 
Sbjct: 107 LLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLC 166

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            + + S+   +  ++   G+ P    YN L+   C+   ++GA+    +M ++   PD +
Sbjct: 167 KDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 226

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++ +CK  ++  A++L M          V  +N LI+   +  ++E+ F +L EM
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            + G+ PNV++Y +I+++ C  G +  ++ IL  MF +   PN   + +++  Y+  G  
Sbjct: 287 QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPN 346

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L  +M   G  P++V Y+ LI GLC+   + EA  +   +  +   P+  +Y+ L
Sbjct: 347 DQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTL 406

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I      GN+  A  +  RM   G    V  Y  ++  L      ++   L +KM   N 
Sbjct: 407 ISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNV 466

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            P+    N  ++     G    A  L  +M Q
Sbjct: 467 VPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 162/322 (50%), Gaps = 2/322 (0%)

Query: 257 LWNRMIREGFLP-NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +  RM R+G  P N  +Y+ +I G+   G   +AV V  +M E +  PN  TY+ +IDG 
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G+L    ++ ++M+ +G  PN + Y  ++  LC+     +  +L+++MA +   P+ 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T++    GL   G     + L  +  +        T + LL+GL +  +V  A E++  
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G+    V YNT+++G C+ G +  AF   G+M     K D IT+N +I   CK  +
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           + NA  LL  ++  G  NP + ++ +L+     +G +++ FI L +M   G+ PN  ++ 
Sbjct: 241 ITNAQDLLMEMQDNG-VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYG 299

Query: 556 VLVRSLFSNLGHLGPVYILDDI 577
            +V +   N      V ILDD+
Sbjct: 300 SIVNAFCKNGKIPEAVAILDDM 321



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 147/292 (50%), Gaps = 5/292 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E++G      QMK   +      + ++IN   +      A  +   +++ G+ PTV+ +N
Sbjct: 205 ELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFN 264

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA     +      + S M+ +G++PNV +Y  ++ A CKN ++  A  +L +M +K
Sbjct: 265 TLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 324

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
              P+A  Y  I+ +  + G  ++A  L  +  S G+S     YN LI GLC + +I EA
Sbjct: 325 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 384

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             ++  + +  + P+ ++Y+T+IS+ C  GN++ +L +  +M   G    + ++  L+ G
Sbjct: 385 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 444

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
               GR +E   L+ +M++   +P+   ++ ++      G+  +A  +  +M
Sbjct: 445 LGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 5/269 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +   I   Q LL +M+  GV+ +   F ++I++Y R G  E+   +   ++E G
Sbjct: 231 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 290

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y  I++A     +      I  +M    + PN   YN ++ A  ++   D A+
Sbjct: 291 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 350

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGL 175
            L+ +M + G +P  V+Y  ++  +C   Q+ EA E+       R       YN LI+  
Sbjct: 351 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISAC 410

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    I++A  L   M   GI   V TY  +IS L   G +     +  +M      P+ 
Sbjct: 411 CYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSN 470

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
                +++ Y   G   +A DL   M+++
Sbjct: 471 AIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 279/583 (47%), Gaps = 65/583 (11%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++NS    G   +A  M  +++   L  +V  YN IL   + + RF     +  +M+RD 
Sbjct: 229 LLNSLCTNGEFRKAEDMLQKMKTCRLSNSVT-YNTILHWYVKKGRFKAALCVLEDMERDS 287

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +  +++TYNI++  LC+  R   A+ LL  M      PD  +Y T+++     G++  A 
Sbjct: 288 IPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAH 347

Query: 156 E-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE-------------------- 190
                 L   F   V+ Y  +I+G C+  +I++A  +L E                    
Sbjct: 348 YVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQILKS 407

Query: 191 MVDRGIDPNVITYST-------------------------------IISSLCDVGNVETS 219
           M++ GIDP+++TYS                                II S C  GN+  +
Sbjct: 408 MLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEA 467

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +   M   G +PN+ ++ +LL+G   GG   +A      ++      +   ++ L+ G
Sbjct: 468 FTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLG 527

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
           +C  G++DEA+ +  +M +N+C P++ TY+ L+ GF + G +L A  +   M+  G  P+
Sbjct: 528 ICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPD 587

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEK-MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            VAYTC++  L        A  + ++ +  E    + + +N+ + G    G ++   +++
Sbjct: 588 TVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMM 647

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             M Q E  PN  +YN L+ G ++  +  ++  L   + + GI+ + VTY  ++ G+   
Sbjct: 648 SDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSEC 707

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW---NPD 515
           G++  A + L KM++EG   D + F+I+I A+ ++ K++NA+QL + ++    W   +P 
Sbjct: 708 GLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMK----WLRMSPS 763

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             +Y++++ G+     + ++   L++ML  G+ PN   +  LV
Sbjct: 764 SKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALV 806



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 265/561 (47%), Gaps = 11/561 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI   + +L+ M  +G+      + ++IN     G+  +A      +    +      +N
Sbjct: 397 EISKAKQILKSMLEDGIDPDIVTYSALINE----GMITEAEHFRQYMSRMKISFDSVSFN 452

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            I+D+            +Y  M R G  PNV TY  LL+ LC+   +  A + +  + + 
Sbjct: 453 CIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDI 512

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEA 184
             A D  ++  ++  ICK G ++EA +L  +         +  Y  L++G C++ KI  A
Sbjct: 513 PSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPA 572

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR-GCNPNIHSFTSLLK 243
             +L  M+D+G+ P+ + Y+ +++ L + G V+ +  +  ++  + G   +  ++ SL+ 
Sbjct: 573 LIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMN 632

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GYL GG  +    + + M +    PN  +Y+ L+HG    G   +++ +   M      P
Sbjct: 633 GYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRP 692

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY  LI G ++ G +  A +   +M+  G  P+ + +  ++    + +  H A  L 
Sbjct: 693 DNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLF 752

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             M +    P++ T++  I GL     +D + ++L +M Q    PN T Y  L++   RV
Sbjct: 753 NCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRV 812

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            ++  AF L  E++  GI    V  ++I+ G+C+ G + EA  +   M+  G      TF
Sbjct: 813 GKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATF 872

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
             +++  CK+ K+ +A+ L  R+        D++SY  L+ G+C    + +A    ++M 
Sbjct: 873 TTLMHCLCKESKIADALHL-KRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMK 931

Query: 544 NEGICPNFATWNVLVRSLFSN 564
           ++G+ PN  T+  L  +++S 
Sbjct: 932 SKGLWPNVTTYITLTGAMYST 952



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 265/559 (47%), Gaps = 11/559 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I   ++  Q M    +S     F  +I+SY   G   +A  ++  +  +G  P V  Y +
Sbjct: 429 ITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQN 488

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L               +       +  T+N LL  +CK   +D A  L  +M    
Sbjct: 489 LLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNN 548

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAF 185
           C PD  +YT ++S  C+ G++  A   L M    GV      Y  L+NGL  E +++ A 
Sbjct: 549 CLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAAS 608

Query: 186 WLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           ++  E++   G+  + I Y+++++     GN+ T   ++  M+     PN  S+  L+ G
Sbjct: 609 YVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHG 668

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y+ GG+  ++  L+  M+R+G  P+ V Y  LI GL   G +D AV    +M      P+
Sbjct: 669 YVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 728

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              +  LI  F++   +  A Q++N M     SP+   Y+ M+  L + N   Q+H ++ 
Sbjct: 729 RLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLR 788

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M      PN   +   +   C  G++D A +L ++MK    +P     + ++ GL +  
Sbjct: 789 EMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCG 848

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL--DAIT 482
           +++EA  + + + + G+   + T+ T++H +C+   + +A  L  K L+E  +L  D ++
Sbjct: 849 KLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHL--KRLMESCRLKVDVVS 906

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N++I   CK  ++++A+ L + ++  G W P++ +Y +L   + ++G MQ     L+ +
Sbjct: 907 YNVLITGLCKDKRISDALDLYEEMKSKGLW-PNVTTYITLTGAMYSTGIMQNGEELLEDI 965

Query: 543 LNEGICPNFATWNVLVRSL 561
              G+ P +     L R +
Sbjct: 966 EERGLIPVYVQLENLERQM 984



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 144/636 (22%), Positives = 273/636 (42%), Gaps = 110/636 (17%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+++ V G SC+  +F S++    R             + E  +K  VK    +LDA +
Sbjct: 123 VLRRLAVMGFSCT-AIFTSLLRIISRFDSTNHV------VFELLVKAYVK-ERKVLDAAV 174

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           A             M   G + +    N +L+AL +       +  L E        D  
Sbjct: 175 A----------VLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDVT 224

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG----SGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           +   +++S+C  G+  +A ++  +      S    YN +++   K+ + + A  +L +M 
Sbjct: 225 TCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDME 284

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
              I  ++ TY+ +I  LC +     +  +L +M      P+  ++ +L+ G+   G+ +
Sbjct: 285 RDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKIN 344

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME--------------- 297
            A  ++N M+R+ F+P+V  Y+T+I G C N  +D+A+SV  +M+               
Sbjct: 345 HAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEISKAKQI 404

Query: 298 -----ENSCPPNVTTYSALI-------------------------------DGFAKAGNL 321
                E+   P++ TYSALI                               D +   GN+
Sbjct: 405 LKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNI 464

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH--------------------- 360
           + A  +++ M+  G SPNV  Y  +++ LCQ     QA                      
Sbjct: 465 VEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNAL 524

Query: 361 --------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
                          L EKM   NC P+  T+   + G C  G++  A+ +L  M     
Sbjct: 525 LLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGV 584

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIE-KCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           +P+   Y  LL+GL+   +VK A  +  EI  K G+  + + YN++++G  + G +    
Sbjct: 585 VPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIK 644

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +++  M       ++ ++NI+++ Y K G+ + ++ L   +   G   PD ++Y  L+ G
Sbjct: 645 RMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKG-IRPDNVTYRLLILG 703

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G +  A  +L+KM+ EGI P+   +++L+ + 
Sbjct: 704 LSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAF 739



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 224/485 (46%), Gaps = 26/485 (5%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---- 154
           N   + +L+KA  K  +V  A   ++ M + G     ++  TI+ ++ + G+ +      
Sbjct: 152 NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFL 211

Query: 155 RE-LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
           RE LA  F   V+  N L+N LC   +  +A  +L +M    +  N +TY+TI+      
Sbjct: 212 RESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLS-NSVTYNTILHWYVKK 270

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G  + +L +L  M       +I+++  ++       R+  A  L  RM ++  +P+   Y
Sbjct: 271 GRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTY 330

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLI+G    G ++ A  V   M   +  P+V TY+ +IDG+ +   +  A  + + M  
Sbjct: 331 NTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQI 390

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  P+ ++               +A  +++ M  +   P+ VT++  I      G +  
Sbjct: 391 TGVMPSEIS---------------KAKQILKSMLEDGIDPDIVTYSALINE----GMITE 431

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A      M + +   +  ++N ++D       + EAF +   + + G   N+ TY  +L 
Sbjct: 432 AEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLR 491

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
           G+C+ G +V+A Q +  +L   + +D  TFN ++   CK G ++ A+ L +++       
Sbjct: 492 GLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCL- 550

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYI 573
           PDI +YT LL G C  G +  A I LQ ML++G+ P+   +  L+  L +        Y+
Sbjct: 551 PDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYV 610

Query: 574 LDDIM 578
             +I+
Sbjct: 611 FQEII 615


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 150/553 (27%), Positives = 263/553 (47%), Gaps = 12/553 (2%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  M+  G+S     + +++ ++ R G+  +A  +  R+++ G+ PT   YN ++ A   
Sbjct: 233 LSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYAR 292

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAV 136
                    +   M   G EP+++TYN+L   LC+  +VD A+KL  EM +    +PD V
Sbjct: 293 LGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVV 352

Query: 137 SYTTIVSSICK-------LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
           +Y T+V +  K       L  +EE R+  ++  S +  +N ++ GLC+E ++EEA   L 
Sbjct: 353 TYNTLVDACFKYQRSSDALNLLEEMRDKGVK--SSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
            M + G+ P+VITY+T+I + C   NV  +  ++ +M   G   +  +  +LL       
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  EA +L     + GF+P+ V+Y T++         + A+ +  +M +    P++ TY+
Sbjct: 471 RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYN 530

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI G    G L  A    N ++  G  P+   Y  ++   C+     +A     KM   
Sbjct: 531 TLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLEN 590

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ VT NT + GLC  G+++ A+KL +   +     ++ TYN L+  L +   V  A
Sbjct: 591 YFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTA 650

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
                ++E  G+Q +  TYN +L  +  AG   EA  +L K L E  KL       +I +
Sbjct: 651 LHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHK-LDESGKLSERFSYPLIKS 709

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWN-PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
             ++ K     ++      GG     D  SY   +  +C  G ++EA   L +M+ +G+ 
Sbjct: 710 SAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMS 769

Query: 549 PNFATWNVLVRSL 561
            + +T+  L+  L
Sbjct: 770 VDSSTYITLMEGL 782



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 248/506 (49%), Gaps = 7/506 (1%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           + +L +F  +    L P    +N ++    ++   +      S M+  G+ P+V TYN L
Sbjct: 192 QASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTL 251

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           LKA C+   +  A  LL  M  +G AP   +Y T+VS+  +LG +++A  +     A  F
Sbjct: 252 LKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGF 311

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI-DPNVITYSTIISSLCDVGNVETSL 220
              +  YN L  GLC+  K++EAF L  EM    I  P+V+TY+T++ +         +L
Sbjct: 312 EPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDAL 371

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L +M  +G   ++ +   ++KG    G+  EA      M  EG  P+V+ Y+TLI   
Sbjct: 372 NLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAY 431

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C   ++ +A  +  +M  +    +  T + L+    K      A ++       G  P+ 
Sbjct: 432 CKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDE 491

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V+Y  ++    + N    A  L ++M+     P+  T+NT IKGLC  G++  A+  L++
Sbjct: 492 VSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNE 551

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           + +   +P+ TTYN ++    +   +++AF+   ++ +   + ++VT NT+++G+C  G 
Sbjct: 552 LMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGK 611

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A +L      +G K+D IT+N +I A CK G V+ A+     +   G   PD  +Y 
Sbjct: 612 LEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARG-LQPDAFTYN 670

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEG 546
            +L  +  +G  +EA   L K+   G
Sbjct: 671 VVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 210/441 (47%), Gaps = 37/441 (8%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +A+R       +N L++  C +  + +A   L  M   G+ P+V+TY+T++ + C  G +
Sbjct: 202 IALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGML 261

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +L +M   G  P   ++ +L+  Y   G   +A+++   M   GF P++  Y+ L
Sbjct: 262 GEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVL 321

Query: 277 IHGLCSNGSMDEAVSVSYQMEENS-CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
             GLC  G +DEA  +  +ME  S   P+V TY+ L+D   K      A  +   M   G
Sbjct: 322 AAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKG 381

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
              ++V +  +VK LC+     +A   ++ M  E   P+ +T+NT I   C    V  A 
Sbjct: 382 VKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAF 441

Query: 396 KLLDQM----------------------KQYE-------------CLPNITTYNELLDGL 420
            L+D+M                      K+YE              +P+  +Y  ++   
Sbjct: 442 VLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAY 501

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            + N+ + A  L  E+ K  +  +I TYNT++ G+C  G + EA   L +++ +G   D 
Sbjct: 502 FKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDD 561

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+NIII+AYCK+G +  A Q  +++     + PD+++  +L+ G+C  G +++A    +
Sbjct: 562 TTYNIIIHAYCKEGDLEKAFQFHNKML-ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFE 620

Query: 541 KMLNEGICPNFATWNVLVRSL 561
               +G   +  T+N L+++L
Sbjct: 621 SWAEKGKKVDVITYNTLIQAL 641



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 161/328 (49%), Gaps = 4/328 (1%)

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           D++  +I     PN   ++ L+H  CS G++ +A+S    M+     P+V TY+ L+   
Sbjct: 196 DVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAH 255

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            + G L  A  +  RM   G +P    Y  +V    +     QA +++E M      P+ 
Sbjct: 256 CRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDL 315

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL-PNITTYNELLDGLLRVNRVKEAFELVT 434
            T+N    GLC  G+VD A KL D+M+    + P++ TYN L+D   +  R  +A  L+ 
Sbjct: 316 WTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLE 375

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E+   G++ ++VT+N ++ G+CR G + EA   L  M  EG   D IT+N +I AYCK  
Sbjct: 376 EMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKAR 435

Query: 495 KVNNAIQLLDR-IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
            V  A  L+D  +R G +   D  +  +LL+ +C     +EA   L+     G  P+  +
Sbjct: 436 NVAKAFVLMDEMVRSGLKM--DTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVS 493

Query: 554 WNVLVRSLFSNLGHLGPVYILDDIMANK 581
           +  ++ + F        +Y+ D++   K
Sbjct: 494 YGTVMAAYFKENKPEPALYLWDEMSKRK 521



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 199/421 (47%), Gaps = 18/421 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M+ +GV  S      V+    R G  E+AL     + E GL P V  YN ++DA  
Sbjct: 373 LLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYC 432

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                +    +   M R G++ + FT N LL  LCK  R + A +LL     +G  PD V
Sbjct: 433 KARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEV 492

Query: 137 SYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           SY T++++  K  + E A     E++ R     +  YN LI GLC   K+ EA   L E+
Sbjct: 493 SYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNEL 552

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G+ P+  TY+ II + C  G++E +     +M      P++ +  +L+ G  L G+ 
Sbjct: 553 MKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKL 612

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L+     +G   +V+ Y+TLI  LC +G +D A+     ME     P+  TY+ +
Sbjct: 613 EKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVV 672

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +   ++AG    A  + +++  +G      +Y  +       +   +  +  +     +C
Sbjct: 673 LSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLI------KSSAEEVKTGKDPEVKSDC 726

Query: 372 PP-------NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
                    +  ++N  +K LC  G++  A  +LD+M Q     + +TY  L++GL++  
Sbjct: 727 ESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQ 786

Query: 425 R 425
           +
Sbjct: 787 K 787



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 197/415 (47%), Gaps = 38/415 (9%)

Query: 184 AFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNV--ETSLGILGQMFVRGCNPNIHSFTS 240
           A  LL     RG + P++   + ++S+L    +   + SL +   +     +PN ++F  
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  +   G   +A    + M   G  P+VV Y+TL+   C  G + EA ++  +M++  
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P   TY+ L+  +A+ G +  A+ +   M + G  P++  Y  +   LCQ     +A 
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 361 SLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            L ++M   +   P+ VT+NT +       R   A+ LL++M+      ++ T+N ++ G
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKG 395

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L R  +++EA   +  + + G+  +++TYNT++   C+A  V +AF L+ +M+  G K+D
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 480 AITFNIIIYAYCKQGKVNNAIQLL----------DRIRGGG------------------- 510
             T N ++Y  CK+ +   A +LL          D +  G                    
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWD 515

Query: 511 -----EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
                +  P I +Y +L+ G+C  G + EA   L +++ +G+ P+  T+N+++ +
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHA 570



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 148/315 (46%), Gaps = 16/315 (5%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + LL+     G    E  + +V+ +Y +    E AL ++  + +  L P++  YN ++ 
Sbjct: 475 AEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIK 534

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L    + +      + + + G+ P+  TYNI++ A CK   ++ A++   +M      P
Sbjct: 535 GLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKP 594

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSV--YNALINGLCKEHKIEEAFWLL 188
           D V+  T+++ +C  G++E+A +L   +   G  V V  YN LI  LCK+  ++ A    
Sbjct: 595 DVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFF 654

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL------GQMFVRGCNPNIHSFTSLL 242
            +M  RG+ P+  TY+ ++S+L + G  E +  +L      G++  R   P I S    +
Sbjct: 655 ADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEV 714

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           K    G      SD  +    +G   +  +Y+  +  LC  G + EA +V  +M +    
Sbjct: 715 KT---GKDPEVKSDCESGGNAKGG--DQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMS 769

Query: 303 PNVTTYSALIDGFAK 317
            + +TY  L++G  K
Sbjct: 770 VDSSTYITLMEGLIK 784


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/597 (24%), Positives = 286/597 (47%), Gaps = 58/597 (9%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN---HILDALLAENRFSMINPI 87
           G + ++++++ R G    A+ +F R+ + G++P +  YN   H+   +     +  +  +
Sbjct: 155 GAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVP--WKEVVEL 212

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
            ++MK  G+ P+ +TYN L+    +      A ++  EM   G  PD V++ +++    K
Sbjct: 213 VASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 272

Query: 148 LGQVEEARELAM---RFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
             + +EA E+     R G   SV  YN+LI+   K+  +E+A  L  EM  +G+ P+V+T
Sbjct: 273 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 332

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+T+IS L   G ++ ++    +M   GC PN+ ++ +L+K + + G+  E   +++   
Sbjct: 333 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 392

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
             GF+P++V ++TL+     NG   E   V  +M++    P   TY +LI  +++ G   
Sbjct: 393 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 452

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A QI+ RM+  G  P+V  Y  ++  L +   + QA  L  +M   +C P+  ++++ +
Sbjct: 453 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 512

Query: 383 KGLCGCGRVD------------------WAMKLLD-----------------QMKQYECL 407
                  R+D                  W +K L                  +++Q  C 
Sbjct: 513 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 572

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
            +I   N ++    +   V++  ++++ +++  I L+  TYN+++H   R G   +   +
Sbjct: 573 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 632

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L ++   G + D  ++N +IYAY ++G++  A +L   ++  G   PD+++Y   +    
Sbjct: 633 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG-LKPDVVTYNIFVKSYV 691

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLV------------RSLFSNLGHLGPVY 572
           ++   +EA   ++ M+ +G  PN  T+N +V            +   SNL  L P Y
Sbjct: 692 SNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGY 748



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 252/532 (47%), Gaps = 8/532 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  MK  GV+     + ++I+  RR  L ++A ++F  ++  G +P    +N +LD   
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   M+R G  P+V TYN L+ +  K+  ++ A  L  EM  KG  PD V
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331

Query: 137 SYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YTT++S + + G+++ A    +  +R G    +  YNALI       K  E   +  E 
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEF 391

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P+++T++T+++     G      G+  +M   G  P   ++ SL+  Y   G  
Sbjct: 392 RSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 451

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
             A  ++ RM+  G  P+V  Y+ ++  L   G  ++A  +  +MEE  C P+  +YS+L
Sbjct: 452 DLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSL 511

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +  +A A  L     + + + S    P+      +V V  + N   +A     ++  + C
Sbjct: 512 LHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRC 571

Query: 372 PPNTVTFNTFIKGLCGCGR-VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             +    N  +  + G  R V    K+L  MK+     +  TYN L+    R+   ++  
Sbjct: 572 SLDINVLNAMV-SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 630

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++TEI+  G++ +  +YNT+++   R G + EA +L  +M   G K D +T+NI + +Y
Sbjct: 631 NILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSY 690

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
                   AI+L+  +   G   P+  +Y S++ G C +G + +A I++  +
Sbjct: 691 VSNSMFEEAIELVRYMVTQG-CKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 741



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/499 (23%), Positives = 220/499 (44%), Gaps = 30/499 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++  G+    D    ++Q+M+  G   S   + S+I+SY + GL EQA+ +   +   G
Sbjct: 266 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKG 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP V  Y  ++  L    +       Y  M R+G +PN+ TYN L+K      +     
Sbjct: 326 MKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMM 385

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            +  E  + G  PD V++ T+++                 FG          NGL     
Sbjct: 386 AVFDEFRSAGFVPDIVTWNTLLAV----------------FGQ---------NGLD---- 416

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
             E   +  EM   G  P   TY ++ISS    G  + ++ I  +M   G  P++ ++ +
Sbjct: 417 -SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 475

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +L     GGR  +A  L+  M      P+  +YS+L+H   +   +D+  ++S  +    
Sbjct: 476 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 535

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P+      L+   +K  NL  A + +  +    CS ++     MV +  +N M  +  
Sbjct: 536 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE 595

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++  M       +  T+N+ +      G  +    +L ++K     P+  +YN ++   
Sbjct: 596 KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY 655

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            R  ++KEA  L +E++  G++ ++VTYN  +       M  EA +L+  M+ +G K + 
Sbjct: 656 GRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNE 715

Query: 481 ITFNIIIYAYCKQGKVNNA 499
            T+N I+  YC+ GK+ +A
Sbjct: 716 RTYNSIVEGYCRNGKLTDA 734



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 196/439 (44%), Gaps = 5/439 (1%)

Query: 139 TTIVSSICKLGQVEEAREL-AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
            T +  + + G++ EA  L     G     Y AL++   +  +  +A  +   MVD G+ 
Sbjct: 127 ATAIRVMARAGRLAEASALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQ 186

Query: 198 PNVITYSTIISSLCDVG-NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
           P ++TY+ ++     +    +  + ++  M   G  P+ +++ +L+          EA+ 
Sbjct: 187 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 246

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +++ M   GF P+ V +++L+         DEA+ V  +ME   CPP+V TY++LI  + 
Sbjct: 247 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 306

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G L  A  +   M   G  P+VV YT ++  L +      A    ++M    C PN  
Sbjct: 307 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 366

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           T+N  IK     G+    M + D+ +    +P+I T+N LL    +     E   +  E+
Sbjct: 367 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM 426

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           +K G      TY +++    R G+   A Q+  +M+  G   D  T+N ++ A  + G+ 
Sbjct: 427 KKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRW 486

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN--FATW 554
             A +L   +    +  PD  SY+SLL    N+  + +       + +E I P+      
Sbjct: 487 EQAEKLFAEME-ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKT 545

Query: 555 NVLVRSLFSNLGHLGPVYI 573
            VLV S  +NL      ++
Sbjct: 546 LVLVNSKVNNLAEAEKAFL 564



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 194/430 (45%), Gaps = 46/430 (10%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+M+V+G+      + ++I+   R G  + A+  +  +   G KP +  YN ++    
Sbjct: 317 LKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHG 376

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMGNKGCAP 133
              +F  +  ++   +  G  P++ T+N LL    +N   + V G +K   EM   G  P
Sbjct: 377 VRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFK---EMKKAGYIP 433

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLL 188
           +  +Y +++SS  + G  + A ++  R         VS YNA+++ L +  + E+A  L 
Sbjct: 434 ERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLF 493

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN-------------I 235
            EM +R   P+  +YS+++ +  +   ++    +   ++     P+             +
Sbjct: 494 AEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKV 553

Query: 236 HSFTSLLKGYLLGGRTHEASDL-----------WNRMIR--EGFLP---------NVVAY 273
           ++     K +L   +   + D+            NRM+R  E  L          +   Y
Sbjct: 554 NNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATY 613

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++L+H     G  ++  ++  +++ +   P+  +Y+ +I  + + G +  AS++++ M  
Sbjct: 614 NSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKC 673

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G  P+VV Y   VK    N+MF +A  L+  M  + C PN  T+N+ ++G C  G++  
Sbjct: 674 SGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTD 733

Query: 394 AMKLLDQMKQ 403
           A   +  + Q
Sbjct: 734 AKIFVSNLPQ 743



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 8/297 (2%)

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTYSALIDGFAKAGNLL 322
           EG L +    +T I  +   G + EA ++      ++ P P+   Y+AL+  F++AG   
Sbjct: 117 EGVLHHPRVLATAIRVMARAGRLAEASALL-----DAAPGPDAGAYTALVSAFSRAGRFR 171

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM-FHQAHSLIEKMAFENCPPNTVTFNTF 381
            A  ++ RM+ +G  P +V Y  ++ V  +  + + +   L+  M      P+  T+NT 
Sbjct: 172 DAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTL 231

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I           A ++ D+MK     P+  T+N LLD   +  R  EA E++ E+E+ G 
Sbjct: 232 ISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGC 291

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             ++VTYN+++    + G++ +A  L  +M ++G K D +T+  +I    + GK++ AI 
Sbjct: 292 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIV 351

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             D +   G   P++ +Y +L+      G   E      +  + G  P+  TWN L+
Sbjct: 352 EYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 407



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 84/155 (54%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+   G+   +  V+ +L  MK   ++ S   + S+++ Y R+G  E+   +   I+  G
Sbjct: 581 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 640

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++ A   + +    + ++S MK  G++P+V TYNI +K+   N+  + A 
Sbjct: 641 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAI 700

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +L+  M  +GC P+  +Y +IV   C+ G++ +A+
Sbjct: 701 ELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 149/543 (27%), Positives = 264/543 (48%), Gaps = 35/543 (6%)

Query: 49  ALKMFYRIREFG--LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           A+  F  +R       P   +YN ++   L E+R  ++  +Y ++   G +P+VFT N+L
Sbjct: 92  AIPAFRSLRALASAPPPPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLL 151

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GV 165
           L+ALC   R++ A ++   M  +    +  S+  +    C+ G+  +A ++     S  +
Sbjct: 152 LRALCDAGRMELAQRVFEAMPVR----NEFSFGILARGYCRAGRSVDALKVLDGMPSMNL 207

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
            V N ++ G CKE  +EEA  L+  M  +G+ PNV+T+++ IS+LC  G V  +  I   
Sbjct: 208 VVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKD 267

Query: 226 M---FVRGC-NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           M   +  G   P+  +F  +L G+   G   EA  L + M   GFL  V +Y+  + GL 
Sbjct: 268 MQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
            NG + EA  +  +M      PN  TY+ ++ G  K G    A ++ N + S   SP+VV
Sbjct: 328 RNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVV 387

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            YT ++   C       A+ ++++MA + C PN+ T+N  ++ L   GR   A +LL++M
Sbjct: 388 TYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERM 447

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELV--------TEIEKCGIQL---------- 443
            +     +    N ++DGL R +++  A  +V        T + + G             
Sbjct: 448 SEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSIS 507

Query: 444 -----NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
                + +TY+ ++  +C+ G   EA + L +M+++    D++ ++  I+ YCK GK + 
Sbjct: 508 QRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSL 567

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           AI++L  +   G  NP   +Y  L+ G        E    + +M  +G+ PN  T+N L+
Sbjct: 568 AIKVLRDMEKKG-CNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLI 626

Query: 559 RSL 561
           +S 
Sbjct: 627 KSF 629



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 221/439 (50%), Gaps = 23/439 (5%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           +V+  + + GL E+A ++  R+R  GL P V  +N  + AL    R      I+ +M+ D
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQED 271

Query: 95  ---GM-EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
              G+  P+  T++++L   C    VD A  L+  M   G      SY   +S + + G+
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 151 VEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           V EA EL       R       YN +++GLCKE K  +A  +   +    + P+V+TY++
Sbjct: 332 VGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTS 391

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++ + C  GN+  +  IL +M  +GC PN  ++  LL+     GRT EA  L  RM  +G
Sbjct: 392 LLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKG 451

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGA 324
           +  +    + +I GLC N  +D A+ +   M EE S                + GN    
Sbjct: 452 YSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGST------------ALGRLGNSF-L 498

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           S + +  IS  C P+ + Y+ ++  LC+   F +A   + +M  ++  P++V ++TFI G
Sbjct: 499 SVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHG 558

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C  G+   A+K+L  M++  C P+  TYN L+ G    ++  E  +L++E+E+ G+  N
Sbjct: 559 YCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPN 618

Query: 445 IVTYNTILHGVCRAGMVVE 463
           ++TYN+++   C+ GM+  
Sbjct: 619 VLTYNSLIKSFCQQGMLTR 637



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 167/335 (49%), Gaps = 15/335 (4%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P    +  L+   L   R      L+  ++  G  P+V   + L+  LC  G M+ A  V
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRV 167

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
              M       N  ++  L  G+ +AG  + A ++ + M S     N+V    +V   C+
Sbjct: 168 FEAMPVR----NEFSFGILARGYCRAGRSVDALKVLDGMPSM----NLVVCNTVVAGFCK 219

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY----ECLP 408
             +  +A  L+E+M  +   PN VTFN+ I  LC  GRV  A ++   M++        P
Sbjct: 220 EGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRP 279

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV-TYNTILHGVCRAGMVVEAFQL 467
           +  T++ +L G      V EA  LV +I +CG  L  V +YN  L G+ R G V EA +L
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLV-DIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHEL 338

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L +M  E    ++ T+NII+   CK+GK  +A ++ + IR G   +PD+++YTSLL   C
Sbjct: 339 LREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSG-VMSPDVVTYTSLLHAYC 397

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           + G +  A   L +M  +G  PN  T+NVL++SL+
Sbjct: 398 SKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLW 432



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 157/355 (44%), Gaps = 28/355 (7%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F  +++ +   G  ++A  +   +R  G    V+ YN  L  L+   R    + +   M
Sbjct: 283 TFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREM 342

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
             + + PN +TYNI++  LCK  +   A ++   + +   +PD V+YT+++ + C  G +
Sbjct: 343 AHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNI 402

Query: 152 EEAR----ELAMRFGSGVS-VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A     E+A +  +  S  YN L+  L +  +  EA  LL  M ++G   +    + I
Sbjct: 403 AAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNII 462

Query: 207 ISSLCDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLK 243
           I  LC    ++ ++GI+  M+  G                       C P+  +++ L+ 
Sbjct: 463 IDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILIS 522

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                GR  EA      MI +   P+ V Y T IHG C +G    A+ V   ME+  C P
Sbjct: 523 ALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNP 582

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +  TY+ LI GF +        ++ + M   G SPNV+ Y  ++K  CQ  M  +
Sbjct: 583 STRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQGMLTR 637



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 28/296 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M  E +  +   +  +++   + G A  A ++   IR   + P V  Y  +L A  
Sbjct: 338 LLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYC 397

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           ++   +  N I   M + G  PN FTYN+LL++L +  R   A +LL  M  KG + D  
Sbjct: 398 SKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTA 457

Query: 137 SYTTIVSSICK-----------LGQVEEARELAMRFG---------SGVS--------VY 168
               I+  +C+            G  EE      R G         S +S         Y
Sbjct: 458 GCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITY 517

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           + LI+ LCKE + +EA   L EM+ + I P+ + Y T I   C  G    ++ +L  M  
Sbjct: 518 SILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEK 577

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +GCNP+  ++  L++G+    ++ E   L + M  +G  PNV+ Y++LI   C  G
Sbjct: 578 KGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQG 633



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 28/235 (11%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K  I     +L +M  +G + +   +  ++ S  R G   +A ++  R+ E G       
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAG 458

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGME-----------------------PNVFTYN 104
            N I+D L   ++  +   I   M  +G                         P+  TY+
Sbjct: 459 CNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYS 518

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR 160
           IL+ ALCK  R D A K L+EM  K  +PD+V Y T +   CK G+   A    R++  +
Sbjct: 519 ILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKK 578

Query: 161 -FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                   YN LI G  ++HK +E   L+ EM ++G+ PNV+TY+++I S C  G
Sbjct: 579 GCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQG 633



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 58/113 (51%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++   D  +  L +M V+ +S    ++ + I+ Y + G    A+K+   + + G
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN 113
             P+ + YN ++     +++   I  + S M+  G+ PNV TYN L+K+ C+ 
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQ 632


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/473 (27%), Positives = 229/473 (48%), Gaps = 10/473 (2%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEAREL---- 157
           + ++ KA  K +  + A  L   M  +  C     S+ ++++ I + G    A E     
Sbjct: 98  FVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHV 157

Query: 158 ----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
                +     V  +N +I  +CK   +++A  +  +M      P+V TY T++  LC  
Sbjct: 158 IGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKA 217

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             ++ ++ +L +M + GC P+  +F  L+ G    G     + L + M  +G  PN V Y
Sbjct: 218 DRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTY 277

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLIHGLC  G +++A+S+  +M  + C PNV TY  +I+G  K G  L  +++   M  
Sbjct: 278 NTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEE 337

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G   N   Y+ ++  L +     +A  L ++M  + C  NT+ ++  I GLC  G+ D 
Sbjct: 338 RGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDE 397

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+++L +M    C PN  TY+ L+ G        +A E+  ++ K     N V Y+ ++H
Sbjct: 398 ALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIH 457

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEW 512
           G+C+ G V EA  +  +ML +G K D + +  +I      G V +A+QL + +     + 
Sbjct: 458 GLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDS 517

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
            PD+++Y  LL  +C    +  A   L  ML+ G  P+  T  + +R+L   L
Sbjct: 518 QPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKL 570



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/491 (29%), Positives = 230/491 (46%), Gaps = 66/491 (13%)

Query: 24  EGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           +GV+ S  V  F  VI +  +VGL + A++MF  +     +P V  Y  ++D L   +R 
Sbjct: 161 KGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRI 220

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
                +   M+ DG  P+  T+N+L+  LCK   +    KL+  M  KGCAP+ V+Y T+
Sbjct: 221 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTL 280

Query: 142 VSSICKLGQVEEARELAMR------------FGSGVS----------------------- 166
           +  +C  G++E+A  L  R            +G+ ++                       
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340

Query: 167 -----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                VY+ALI+GL KE K +EA  L  EM  +  + N I YS +I  LC  G  + +L 
Sbjct: 341 HVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALE 400

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M    C PN ++++SL+KG+   G  H+A ++W  M +  F  N V YS LIHGLC
Sbjct: 401 VLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLC 460

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN--GCSPN 339
            +G + EA+ V  QM    C P+V  Y ++I+G + AG +  A Q++N M+       P+
Sbjct: 461 KDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPD 520

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           VV Y  ++  LC+ +   +A  L+  M    C P+ VT   F++ L              
Sbjct: 521 VVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTL-------------- 566

Query: 400 QMKQYECLPNITTYNELLDG----LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
                E L       E LDG    LL+  RV  A ++V  + +  +     T+  ++  +
Sbjct: 567 ----REKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDL 622

Query: 456 CRAGMVVEAFQ 466
           C    V  A Q
Sbjct: 623 CNPKKVQAAIQ 633



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 46/300 (15%)

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV---KVLCQNNMFHQAHSL 362
           +T+ +LID +A  G+     ++ +RM    C   VV   C V   K   + ++  +A  L
Sbjct: 61  STFYSLIDNYANLGDFKSLEKVLDRM---RCEKRVVVEKCFVVIFKAYGKAHLPEKAVGL 117

Query: 363 IEKMAFE---------------------------------------NCPPNTVTFNTFIK 383
            ++MA+E                                       N  PN +TFN  IK
Sbjct: 118 FDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIK 177

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
            +C  G VD A+++   M   +C P++ TY  L+DGL + +R+ EA  L+ E++  G   
Sbjct: 178 TMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFP 237

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           + VT+N +++G+C+ G +    +L+  M ++G   + +T+N +I+  C +GK+  AI LL
Sbjct: 238 SPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLL 297

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           DR+    +  P++++Y +++ G+   G   +    L  M   G   N   ++ L+  LF 
Sbjct: 298 DRMV-SSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFK 356



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/387 (23%), Positives = 171/387 (44%), Gaps = 28/387 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K ++  V  L+  M ++G + +E  + ++I+     G  E+A+ +  R+    
Sbjct: 245 LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK 304

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y  I++ L+ + R      + + M+  G   N + Y+ L+  L K  +   A 
Sbjct: 305 CVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAM 364

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGL 175
           +L  EM  K C  + + Y+ ++  +C+ G+ +EA E+       R       Y++L+ G 
Sbjct: 365 QLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGF 424

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            +     +A  +  +M       N + YS +I  LC  G V+ ++ +  QM  +GC P++
Sbjct: 425 FEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDV 484

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMI--REGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
            ++ S++ G    G   +A  L+N M+       P+VV Y+ L++ LC   S+  A+ + 
Sbjct: 485 VAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLL 544

Query: 294 YQMEENSCPPNVTTY-----------------SALIDGFA----KAGNLLGASQIWNRMI 332
             M +  C P++ T                     +DG      K   +LGAS+I   M+
Sbjct: 545 NSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVML 604

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQA 359
                P    +T +V+ LC       A
Sbjct: 605 QKLLPPKPSTWTRVVEDLCNPKKVQAA 631


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 250/506 (49%), Gaps = 8/506 (1%)

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD--GMEPNVFTYNILLKALCKNNRVD 117
           G +P    +N ++ A +A     +   +   M R      P+ F+YN+++  L ++ +  
Sbjct: 152 GARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 211

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFGS--GVSVYNALI 172
            A K+  EM + G AP+ ++Y T++    K G +E     R+  +  G    V  YN L+
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLL 271

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +GLC+  +++E   L+ EM    + P+  TYS +   L   G  +T L +  +   +G  
Sbjct: 272 SGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
              ++ + LL G    G+  +A  ++  ++  G +P  V Y+TLI+G C    +  A  +
Sbjct: 332 LGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             QM+     P+  TY+ALI+G  K   +  A  +   M  +G  P+V  +  ++     
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
                +  +++  M  +    + ++F + +K  C  G++  A+ +LD M   +  PN   
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           YN ++D  +     ++A  LV +++  G+  +IVTYN +L G+CR+  + EA +L+  + 
Sbjct: 512 YNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 473 IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGM 532
            +G + D +++N II A C +G  + A++LL  +   G   P + +  +L+  + ++G +
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG-IRPTLRTCHTLVSALASAGRV 630

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLV 558
            +     Q+ML++ + P+ + + ++V
Sbjct: 631 HDMECLYQQMLHKNVEPSSSIYGIMV 656



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/508 (24%), Positives = 243/508 (47%), Gaps = 8/508 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P++   N +L++LL   R + +   +  +   G  P+ F +N +++A      +D A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 123 LVEMGNKGCAP--DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           L  MG    AP  DA SY  +++ + + G+  +A ++      M        YN +I+G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K   +E  F L  +M+  G  PNV+TY+ ++S LC  G ++ +  ++ +M      P+ 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +++ L  G    G +     L+   +++G +      S L++GLC +G + +A  V   
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           +      P    Y+ LI+G+ +  +L GA  I+ +M S    P+ + Y  ++  LC+  M
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  L+ +M      P+  TFNT I      G+++    +L  M+Q     ++ ++  
Sbjct: 420 VTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++    +  ++ EA  ++ ++    +  N   YN+I+     +G   +A  L+ KM   G
Sbjct: 480 VVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSG 539

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
                +T+N+++   C+  +++ A +L+  +R  G   PD++SY +++   CN G   +A
Sbjct: 540 VSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKA 598

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFS 563
              LQ+M   GI P   T + LV +L S
Sbjct: 599 LELLQEMNKYGIRPTLRTCHTLVSALAS 626



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 238/490 (48%), Gaps = 7/490 (1%)

Query: 10  EIDGVQYLLQQM-KVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           ++D    +L++M + EG    +   +  VI    R G    ALK+F  + + G+ P    
Sbjct: 172 DLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRIT 231

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN ++D  +          +   M  DG +PNV TYN+LL  LC+  R+D    L+ EM 
Sbjct: 232 YNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMA 291

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSVY--NALINGLCKEHKIE 182
           +    PD  +Y+ +   + + G+ +    L   +++ G  +  Y  + L+NGLCK+ K+ 
Sbjct: 292 SHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVA 351

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A  +   +V  G+ P  + Y+T+I+  C V ++  +  I  QM  R   P+  ++ +L+
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 411

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G        +A DL   M + G  P+V  ++TLI    + G +++  +V   M++    
Sbjct: 412 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +V ++ +++  F K G +  A  I + MI    +PN   Y  ++    ++    QA  L
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLL 531

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +EKM       + VT+N  +KGLC   ++D A +L+  ++     P++ +YN ++     
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
                +A EL+ E+ K GI+  + T +T++  +  AG V +   L  +ML +  +  +  
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651

Query: 483 FNIIIYAYCK 492
           + I++ AY +
Sbjct: 652 YGIMVDAYVR 661



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 206/468 (44%), Gaps = 40/468 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +  +M   GV+ +   + ++I+ + + G  E   ++  ++   G KP V  YN +L  L 
Sbjct: 216 VFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLC 275

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNIL------------------------------ 106
              R      +   M    M P+ FTY+IL                              
Sbjct: 276 RTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY 335

Query: 107 -----LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----REL 157
                L  LCK+ +V  A ++   + + G  P  V Y T+++  C++  +  A     ++
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 158 AMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             R      + YNALINGLCK   + +A  L+ EM   G+DP+V T++T+I +    G +
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E    +L  M  +G   ++ SF S++K +   G+  EA  + + MI +   PN   Y+++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I     +G  ++A+ +  +M+ +    ++ TY+ L+ G  ++  +  A ++   + + G 
Sbjct: 516 IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV+Y  ++   C      +A  L+++M      P   T +T +  L   GRV     
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMEC 635

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L  QM      P+ + Y  ++D  +R     +   L  E+ + GI  +
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 173/383 (45%), Gaps = 38/383 (9%)

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P++ S   LL+  L  GR  +    +  ++  G  P+  A++ ++    + G +D A+++
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 293 SYQM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
             +M   E + PP+  +Y+ +I G  ++G    A ++++ M+  G +PN + Y  M+   
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +         L ++M  +   PN VT+N  + GLC  GR+D    L+D+M  +  LP+ 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY+ L DGL R    +    L  E  K G+ L   T + +L+G+C+ G V +A Q+   
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359

Query: 471 MLIEG-----------------------------------TKLDAITFNIIIYAYCKQGK 495
           ++  G                                    + D IT+N +I   CK   
Sbjct: 360 LVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEM 419

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           V  A  L+  +   G  +P + ++ +L+     +G +++ F  L  M  +GI  +  ++ 
Sbjct: 420 VTKAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 556 VLVRSLFSNLGHLGPVYILDDIM 578
            +V++   N      V ILDD++
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMI 501



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 30/266 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G   +++    +L  M+ +G+      F SV+ ++ + G   +A+ +   +    
Sbjct: 445 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 504

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P  ++YN I+DA +          +   MK  G+  ++ TYN+LLK LC+++++D A 
Sbjct: 505 VAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 564

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L+  + N+G  PD VSY TI+S+ C  G  ++A E                        
Sbjct: 565 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE------------------------ 600

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 LL EM   GI P + T  T++S+L   G V     +  QM  +   P+   +  
Sbjct: 601 ------LLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 654

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGF 266
           ++  Y+      + + L   M  +G 
Sbjct: 655 MVDAYVRCENDSKVASLKKEMSEKGI 680



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 66/134 (49%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L    +ID  + L+  ++ +G+      + ++I++    G  ++AL++   + ++G
Sbjct: 550 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PT++  + ++ AL +  R   +  +Y  M    +EP+   Y I++ A  +        
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 669

Query: 121 KLLVEMGNKGCAPD 134
            L  EM  KG A D
Sbjct: 670 SLKKEMSEKGIAFD 683


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 148/576 (25%), Positives = 268/576 (46%), Gaps = 56/576 (9%)

Query: 9   CEIDGVQY---LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           C+I  VQY   ++  +   GV        ++++ Y  VGL  +AL +     + G+KP +
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 66  KIYNHILDALLAENRF----SMINPIYSNMKRD-----------------GMEPNVFTYN 104
             YN +++A           S++N I    + D                  ++P V T+ 
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG 164
            L+ A CK+  +D  + L  +M   G  PD V+ ++I                       
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSI----------------------- 277

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
                  + GLC+  K+ EA  LL EM + G+DPN ++Y+TIIS+L   G V  +     
Sbjct: 278 -------LYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQS 330

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           QM VRG + ++   T+++ G    G++ EA +++  +++   +PN V Y+ L+ G C  G
Sbjct: 331 QMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVG 390

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
            ++ A +V  +ME+    PNV T+S++I+G+AK G L  A ++  +M+     PNV  Y 
Sbjct: 391 DVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYA 450

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++    +      A    ++M       N + F+  +  L   G +  A  L+  +   
Sbjct: 451 ILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSK 510

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
               ++  Y+ L+DG  +      A  +V E+ +  +Q ++V YN +  G+ R G   E 
Sbjct: 511 GIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEP 569

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +  +M+  G   D +T+N ++  Y  QGK  NA+ LL+ ++  G   P++++Y  L+ 
Sbjct: 570 KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVM-PNMVTYNILIG 628

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           G+C +G +++    L +ML  G  P       L+++
Sbjct: 629 GLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKA 664



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/526 (26%), Positives = 256/526 (48%), Gaps = 35/526 (6%)

Query: 5   LGEKCEIDGVQY---LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           L   C++  V++   +LQ+M+ E V  +   F S+IN Y + G+  +A+++  ++ +  +
Sbjct: 383 LDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNI 442

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P V +Y  +LD      +       Y  MK  G+E N   ++ILL  L ++  +  A  
Sbjct: 443 MPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQS 502

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKI 181
           L+ ++ +KG   D  +Y++                              L++G  KE   
Sbjct: 503 LIKDILSKGIYLDVFNYSS------------------------------LMDGYFKEGNE 532

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
             A  ++ EM ++ +  +V+ Y+ +   L  +G  E    +  +M   G  P+  ++ S+
Sbjct: 533 SAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSV 591

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +  Y + G+T  A DL N M   G +PN+V Y+ LI GLC  G++++ +SV ++M     
Sbjct: 592 MNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGY 651

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P    +  L+  ++++       QI  +++  G + N + Y  ++ VLC+  M  +A+ 
Sbjct: 652 VPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANV 711

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           ++ +M  +    + VT+N  I+G C    V+ A     QM      PNITTYN LL+GL 
Sbjct: 712 VLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLS 771

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               +++A +LV+E+ + G+  N  TYN ++ G  R G   ++ +L  +M+ +G      
Sbjct: 772 TNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTG 831

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           T+N++I  Y K GK+  A +LL+ +   G   P+  +Y  L+ G C
Sbjct: 832 TYNVLIQDYAKAGKMRQARELLNEMLTRGRI-PNSSTYDVLICGWC 876



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 261/547 (47%), Gaps = 48/547 (8%)

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L+PTV  +  ++ A            +Y  M   G+ P+V T + +L  LC++ ++  A 
Sbjct: 232 LQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAA 291

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVY----NALI 172
            LL EM N G  P+ VSYTTI+S++ K G+V EA     ++ +R   G+S+       ++
Sbjct: 292 MLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVR---GISIDLVLCTTMM 348

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
           +GL K  K +EA  +   ++   + PN +TY+ ++   C VG+VE +  +L +M      
Sbjct: 349 DGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVL 408

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG------------- 279
           PN+ +F+S++ GY   G  ++A ++  +M++   +PNV  Y+ L+ G             
Sbjct: 409 PNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGF 468

Query: 280 ----------------------LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
                                 L  +G M EA S+   +       +V  YS+L+DG+ K
Sbjct: 469 YKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFK 528

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            GN   A  +   M       +VVAY  + K L +   + +  S+  +M      P+ VT
Sbjct: 529 EGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVT 587

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N+ +      G+ + A+ LL++MK Y  +PN+ TYN L+ GL +   +++   ++ E+ 
Sbjct: 588 YNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEML 647

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             G     + +  +L    R+       Q+  K++  G  L+ + +N +I   C+ G   
Sbjct: 648 AVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTK 707

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A  +L  +   G  + DI++Y +L+ G C    +++AF    +ML  GI PN  T+N L
Sbjct: 708 KANVVLTEMVIKG-ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNAL 766

Query: 558 VRSLFSN 564
           +  L +N
Sbjct: 767 LEGLSTN 773



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 249/553 (45%), Gaps = 7/553 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID    L +QM + GV        S++    R G   +A  +   +   GL P    Y  
Sbjct: 252 IDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTT 311

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           I+ ALL   R        S M   G+  ++     ++  L K  +   A ++   +    
Sbjct: 312 IISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLN 371

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAF 185
             P+ V+YT ++   CK+G VE A  +  +         V  ++++ING  K+  + +A 
Sbjct: 372 LVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAV 431

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L +MV   I PNV  Y+ ++      G  E + G   +M   G   N   F  LL   
Sbjct: 432 EVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNL 491

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G   EA  L   ++ +G   +V  YS+L+ G    G+   A+SV  +M E     +V
Sbjct: 492 KRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDV 551

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
             Y+AL  G  + G     S +++RMI  G +P+ V Y  ++           A  L+ +
Sbjct: 552 VAYNALTKGLLRLGKYEPKS-VFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNE 610

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M      PN VT+N  I GLC  G ++  + +L +M     +P    +  LL    R  +
Sbjct: 611 MKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRK 670

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
                ++  ++   G+ LN + YNT++  +CR GM  +A  +L +M+I+G   D +T+N 
Sbjct: 671 ADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNA 730

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  YC    V  A     ++   G  +P+I +Y +LL G+  +G M++A   + +M   
Sbjct: 731 LIRGYCTGSHVEKAFNTYSQMLVSG-ISPNITTYNALLEGLSTNGLMRDADKLVSEMRER 789

Query: 546 GICPNFATWNVLV 558
           G+ PN  T+N+LV
Sbjct: 790 GLVPNATTYNILV 802



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 141/598 (23%), Positives = 275/598 (45%), Gaps = 93/598 (15%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK--- 112
           +R   L P++ ++N +L    A    S +  +YS M   G+ PNVF+ N+L+ +LCK   
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 113 --------NNRV-------------------DGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                    N V                   D  + LL EM  KG   D+V+   +V   
Sbjct: 61  LGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 146 CKLGQVEEARELAMRF-GSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C++G V+ A  +     G GV +     N L++G C+   +  A  L+ +    G+ P++
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMF---------------------VRGCNPNIHSFT 239
           +TY+T++++ C  G++  +  ++ ++                      +R   P + ++T
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+  Y       +   L+ +MI  G +P+VV  S++++GLC +G + EA  +  +M   
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNM 300

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS---------------------- 337
              PN  +Y+ +I    K+G ++ A    ++M+  G S                      
Sbjct: 301 GLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEA 360

Query: 338 -------------PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
                        PN V YT ++   C+      A ++++KM  E+  PN VTF++ I G
Sbjct: 361 EEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIING 420

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
               G ++ A+++L +M Q   +PN+  Y  LLDG  R  + + A     E++  G++ N
Sbjct: 421 YAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEEN 480

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            + ++ +L+ + R+G + EA  L+  +L +G  LD   ++ ++  Y K+G  + A+ ++ 
Sbjct: 481 NIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQ 540

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            +    +   D+++Y +L  G+   G  +   ++  +M+  G+ P+  T+N ++ + F
Sbjct: 541 EMT-EKDMQFDVVAYNALTKGLLRLGKYEPKSVF-SRMIELGLTPDCVTYNSVMNTYF 596



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/544 (24%), Positives = 264/544 (48%), Gaps = 7/544 (1%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           QM V G+S    +  ++++   + G +++A +MF  I +  L P    Y  +LD      
Sbjct: 331 QMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVG 390

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYT 139
                  +   M+++ + PNV T++ ++    K   ++ A ++L +M      P+   Y 
Sbjct: 391 DVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYA 450

Query: 140 TIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDR 194
            ++    + GQ E A        S G+     +++ L+N L +   ++EA  L+ +++ +
Sbjct: 451 ILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSK 510

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
           GI  +V  YS+++      GN   +L ++ +M  +    ++ ++ +L KG L  G+ +E 
Sbjct: 511 GIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEP 569

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG 314
             +++RMI  G  P+ V Y+++++     G  + A+ +  +M+     PN+ TY+ LI G
Sbjct: 570 KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGG 629

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
             K G +     + + M++ G  P  + +  ++K   ++        + +K+       N
Sbjct: 630 LCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLN 689

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
            + +NT I  LC  G    A  +L +M       +I TYN L+ G    + V++AF   +
Sbjct: 690 QMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYS 749

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           ++   GI  NI TYN +L G+   G++ +A +L+ +M   G   +A T+NI++  + + G
Sbjct: 750 QMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVG 809

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
              ++I+L   +   G + P   +Y  L+     +G M++A   L +ML  G  PN +T+
Sbjct: 810 NKRDSIKLYCEMITKG-FIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTY 868

Query: 555 NVLV 558
           +VL+
Sbjct: 869 DVLI 872


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/472 (27%), Positives = 240/472 (50%), Gaps = 9/472 (1%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P V  +N +L    A + F ++N +   MK  G+  N  T+ ++L ALC    +D A  
Sbjct: 125 EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVS 184

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLC 176
               +    C P   +YT +V  +CK  +VE A     E+  + +   +  Y++LI+GL 
Sbjct: 185 YFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLS 244

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  +++EA  L+  MV RG  P  + Y++I++ LC  G ++ ++  + +M  R   P + 
Sbjct: 245 KAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 304

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +++ ++ GY+  G+  +A  +   M      P+ ++Y+  I  L S G  +EA  V   M
Sbjct: 305 TYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM 364

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            E  C P++ TY  +ID F K G++  A+ +   M      PN   YT ++    +++  
Sbjct: 365 VEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRL 424

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM--KQYECLPNITTYN 414
            +A  L +++  +   P+TVT+NT I  LC   ++D A++LL +M  ++ E  P+I TY+
Sbjct: 425 EEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYS 484

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            ++ GL +V   + AF+L+ E+   G+  +  TY +++  +  AG V  A +LL +ML  
Sbjct: 485 MIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKA 544

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           G   D  T+  ++   C+   V+ A  LL  +   G   P+  ++ ++  G 
Sbjct: 545 GIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGH-TPNEFTFKAVEKGF 594



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 227/467 (48%), Gaps = 33/467 (7%)

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
           EPNV ++NILL+     +  +    LL EM ++G   +  ++  I+S++C    +++A  
Sbjct: 125 EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKA-- 182

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
                   VS +N++    C                    +P + TY+ ++  LC    V
Sbjct: 183 --------VSYFNSVSPNKC--------------------EPTLFTYTVLVDGLCKAHKV 214

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           E +  +  +M  +G  P+I +++SL+ G    GR  EA  L + M+  G  P  VAY+++
Sbjct: 215 ERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSI 274

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GLC  G + EAV    +M      P V TYS ++ G+   G +  A  +   M    C
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDC 334

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           +P+ ++YT  ++ L       +A  + E M  + C P+  T+   I   C  G +  A  
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 394

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +L  M +    PN   Y  ++DG ++ +R++EA EL   I K GI  + VTYNT+++ +C
Sbjct: 395 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 454

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDA--ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           +   + EA +LL +M     +L+   +T+++II+   K G    A  LL  +   G   P
Sbjct: 455 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVI-P 513

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           D  +YTSL+  +  +G +  A   L++ML  GI P+  T+  LV+ L
Sbjct: 514 DCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 560



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 229/472 (48%), Gaps = 50/472 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVS---CSEGVFISVINSYRRVGLAEQALKMFYRIR 57
           ++     + + + V  LL++MK  G++    + GV +S + + R +   ++A+  F  + 
Sbjct: 134 LLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDL---DKAVSYFNSVS 190

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
               +PT+  Y  ++D L   ++      ++  M R G +P++  Y+ L+  L K  RVD
Sbjct: 191 PNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVD 250

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALI 172
            A KL+  M  +G  P AV+YT+IV+ +CK G+++EA +             V  Y+ ++
Sbjct: 251 EARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIV 310

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            G     K+E+AF ++ EM DR   P+ I+Y+  I +L  +G  E +  +   M  +GC 
Sbjct: 311 TGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCK 370

Query: 233 PNIHS-----------------------------------FTSLLKGYLLGGRTHEASDL 257
           P++H+                                   +T ++ G++   R  EA +L
Sbjct: 371 PDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALEL 430

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME--ENSCPPNVTTYSALIDGF 315
           + R++++G LP+ V Y+T+I+ LC    MDEA+ +  +M+  +    P++ TYS +I G 
Sbjct: 431 YQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL 490

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G    A  +   MI NG  P+   YT +++ L       +A  L+E+M      P+ 
Sbjct: 491 GKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDD 550

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL-LRVNRV 426
            T+ T ++ LC    VD A  LL +M +    PN  T+  +  G  L+++R+
Sbjct: 551 HTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGFRLQLDRL 601



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 130/257 (50%), Gaps = 4/257 (1%)

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T ++L+    + G+L  A   +   IS    PNV ++  +++     + F   ++L+ +M
Sbjct: 98  TRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREM 154

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                  N  T    +  LC    +D A+   + +   +C P + TY  L+DGL + ++V
Sbjct: 155 KSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKV 214

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
           + A ++  E+ + G + +I+ Y++++ G+ +AG V EA +L+  M+  G    A+ +  I
Sbjct: 215 ERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSI 274

Query: 487 IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +   CK G++  A++ +  +R        + +Y+ ++ G    G +++AF  +++M +  
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPR-VDTYSFIVTGYIGMGKVEKAFAVMEEMADRD 333

Query: 547 ICPNFATWNVLVRSLFS 563
             P+  ++ + + +L+S
Sbjct: 334 CAPDTISYTMFIEALYS 350


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 143/598 (23%), Positives = 288/598 (48%), Gaps = 41/598 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  LG++ ++     +L  ++ +G       + S+I +Y   G    A+ +F ++ E G
Sbjct: 188 IITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEG 247

Query: 61  LKPTVKIYNHILDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
            KPT+  YN IL+        +S I+ +   MK  G+ P+ +TYN L+    + +  + A
Sbjct: 248 CKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEA 307

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALING 174
            ++  EM   G +PD V++ T++    K  + +EA E+        F   +  YN+LI+ 
Sbjct: 308 AQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISA 367

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             ++  + EA  L  +MV++GI P+V TY+T++S     G  E ++ I G+M   GC PN
Sbjct: 368 YARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPN 427

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +F +L+K +   GR  E   ++  +      P++V ++TL+     NG   E   V  
Sbjct: 428 ICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFK 487

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           +M+     P   T++ LI  +++ G+   A  ++ RM+  G +P++ +Y  ++  L +  
Sbjct: 488 EMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGG 547

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM------------- 401
           ++ Q+  +  +M    C PN +T+ + +        ++    L +++             
Sbjct: 548 LWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLK 607

Query: 402 ----------------KQYECL-----PNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
                             +E L     P+++T N ++    R   V +A E++  + + G
Sbjct: 608 TLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESG 667

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
              ++ TYN++++   R+     + ++L ++L +G K D I++N +I+AYC+ G++ +A 
Sbjct: 668 FSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDAS 727

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           ++   ++  G   PD+I+Y + +         ++A   ++ M+  G   N  T+N +V
Sbjct: 728 RIFSYMKTYG-LVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIV 784



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 281/610 (46%), Gaps = 54/610 (8%)

Query: 1   MIEKLGEKCEIDGV-QYLLQQMKVEGVSCSEGVF----ISVINSYRRVGLAEQ---ALKM 52
           +I+   E  E+D V   L +    E +S S G +    + V+   + +G  ++   A+ +
Sbjct: 107 LIDPCFEGSELDKVLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSV 166

Query: 53  FYRIRE---FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           F  +RE   F       +   I+  L  E + S  + I +N+++DG + +V+ Y  L+ A
Sbjct: 167 FSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITA 226

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG---SGVS 166
              N R   A  +  +M  +GC P  ++Y  I++   K+G +  ++   +  G   SGV+
Sbjct: 227 YASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMG-MPWSKISGLVHGMKSSGVA 285

Query: 167 ----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                YN LI+   +    EEA  +  EM   G  P+ +T++T++         + ++ +
Sbjct: 286 PDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEV 345

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L +M   G +P+I ++ SL+  Y   G   EA +L ++M+ +G  P+V  Y+TL+ G   
Sbjct: 346 LKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEK 405

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G  + A+ +  +M    C PN+ T++ALI      G      +++  +    C+P++V 
Sbjct: 406 AGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVT 465

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           +  ++ V  QN M  +   + ++M      P   TFNT I     CG    AM +  +M 
Sbjct: 466 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRML 525

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR----- 457
           +    P++++YN +L  L R    +++ ++  E++    + N +TY ++LH         
Sbjct: 526 EAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIE 585

Query: 458 ----------AGMVVEAFQLLGKMLIEGTKLDAI-------------------TFNIIIY 488
                     +G+      LL  +++  +K D +                   T N +I 
Sbjct: 586 RMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIA 645

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            Y ++  V  A ++L+ +   G ++P + +Y SL++    S   + +   L+++L +G+ 
Sbjct: 646 IYGRRQMVAKANEILNFMNESG-FSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLK 704

Query: 549 PNFATWNVLV 558
           P+  ++N ++
Sbjct: 705 PDLISYNTVI 714



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 219/465 (47%), Gaps = 16/465 (3%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L++M+  G S S   + S+I++Y R GL  +A+++  ++ E G+KP V  Y  +L    
Sbjct: 345 VLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGF- 403

Query: 77  AENRFSMINP---IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
              +  M  P   I+  M+  G +PN+ T+N L+K      R     K+  E+    CAP
Sbjct: 404 --EKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAP 461

Query: 134 DAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D V++ T+++   + G   E     +E+    F      +N LI+   +    ++A  + 
Sbjct: 462 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVY 521

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M++ G+ P++ +Y+ ++++L   G  E S  +  +M    C PN  ++ SLL  Y   
Sbjct: 522 KRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANS 581

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE--NSCPPNVT 306
                   L   +      P  V   TL+     N   D  +   +  EE      P+++
Sbjct: 582 KEIERMHTLAEEIYSGLTEPVPVLLKTLV---LVNSKCDLLMETEHAFEELKKKGSPDLS 638

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T +A+I  + +   +  A++I N M  +G SP++  Y  ++ +  ++  F ++  +++++
Sbjct: 639 TLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEI 698

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   P+ +++NT I   C  GR+  A ++   MK Y  +P++ TYN  +      +  
Sbjct: 699 LAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLF 758

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
           ++A  +V  + K G + N  TYN+I+ G C+     +A   +  +
Sbjct: 759 EDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSL 803



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 35/348 (10%)

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+   AS + N + ++GF  +V AY++LI    SNG   +AV V  +MEE  C P + TY
Sbjct: 196 GKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITY 255

Query: 309 SALIDGFAKAGNLLGA-SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           + +++ + K G      S + + M S+G +P+   Y  ++    + +++ +A  + E+M 
Sbjct: 256 NVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMK 315

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                P+ VTFNT +       R   AM++L +M+     P+I TYN L+    R   ++
Sbjct: 316 LSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLR 375

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA EL  ++ + GI+ ++ TY T+L G  +AGM   A ++ G+M   G K +  TFN +I
Sbjct: 376 EAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALI 435

Query: 488 YAYCKQGKVNNAIQLLDRIR------GGGEWN---------------------------- 513
             +  +G+    +++ + I           WN                            
Sbjct: 436 KMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 495

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           P+  ++ +L+      G  Q+A    ++ML  G+ P+ +++N ++ +L
Sbjct: 496 PERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAAL 543



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 158/316 (50%), Gaps = 7/316 (2%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           G   E+ GV    ++MK  G       F ++I++Y R G  +QA+ ++ R+ E G+ P +
Sbjct: 477 GMDSEVSGV---FKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDL 533

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             YN +L AL     +     +++ MK    +PN  TY  LL A   +  ++  + L  E
Sbjct: 534 SSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEE 593

Query: 126 MGNKGCAPDAVSYTTIV--SSICKL-GQVEEA-RELAMRFGSGVSVYNALINGLCKEHKI 181
           + +    P  V   T+V  +S C L  + E A  EL  +    +S  NA+I    +   +
Sbjct: 594 IYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMV 653

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            +A  +L  M + G  P++ TY++++       N E S  +L ++  +G  P++ S+ ++
Sbjct: 654 AKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTV 713

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           +  Y   GR  +AS +++ M   G +P+V+ Y+T +    ++   ++A+ V   M ++ C
Sbjct: 714 IFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGC 773

Query: 302 PPNVTTYSALIDGFAK 317
             N  TY++++DG+ K
Sbjct: 774 KRNQNTYNSIVDGYCK 789



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 7/181 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI   G +  +     +L  M   G S S   + S++  + R    E++ ++   I   G
Sbjct: 643 MIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKG 702

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP +  YN ++ A     R    + I+S MK  G+ P+V TYN  + +   ++  + A 
Sbjct: 703 LKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAI 762

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            ++  M   GC  +  +Y +IV   CK  +    R  A+ F   VS  N L   + KE +
Sbjct: 763 GVVRYMIKHGCKRNQNTYNSIVDGYCKHSR----RADAIMF---VSSLNQLDPHVTKEEE 815

Query: 181 I 181
           +
Sbjct: 816 L 816


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 247/504 (49%), Gaps = 10/504 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   +D +   +Q M     S     +  ++    +  +  +AL +FY+I+   
Sbjct: 130 LIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRK 189

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG-MEPNVFTYNILLKALCKNNRVDGA 119
             PT  +YN ++  L+ E     I+ +Y+ +  +G   P+  TY+ L+ A  K  R D A
Sbjct: 190 CNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFA 249

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALING 174
           ++L  EM   G  P    YTTI++   KL +VE A  L     G G    V  Y  LI G
Sbjct: 250 FRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKG 309

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K  ++++A+ L   M+  G  P+V+  + +I+ L   G +E +L + G+M    C PN
Sbjct: 310 LGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPN 369

Query: 235 IHSFTSLLKGYLLGGRTHEASDLW-NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           + ++ +++K           + LW  +M   G  P+   Y+ LI G C    +++A+ + 
Sbjct: 370 VVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLL 429

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M+E   PP    Y +LID   +A     A++++  +  N    +   Y  M+K     
Sbjct: 430 EEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNC 489

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  L  +     C P+  T+N  + G+   G +D A  L+  M++  C P+I ++
Sbjct: 490 GRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSH 549

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           N +L+GL +    K A E+ T++++  I  + V+YNTIL  + RAGM   A +L+ +M +
Sbjct: 550 NIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKL 609

Query: 474 EGTKLDAITFNIIIYAYCKQGKVN 497
           +G + D+IT++ I+ A    GKV+
Sbjct: 610 KGFEYDSITYSSILEAV---GKVD 630



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 229/463 (49%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +LK L K   V+ A  +  ++  + C P A  Y T++  +   G  E+  EL     S  
Sbjct: 165 ILKILGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG 224

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+   K  + + AF L  EM + G+ P    Y+TI++    +  VE +
Sbjct: 225 NCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAA 284

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           L ++ +M  +GC P + ++T L+KG    GR  +A  L+  M+++G  P+VV  + LI+ 
Sbjct: 285 LRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINI 344

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +++A+ +  +M+   C PNV TY+ +I    ++      + +W  +M +NG +P
Sbjct: 345 LGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAP 404

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y  ++   C+ N   +A  L+E+M  +  PP    + + I  L    R + A +L 
Sbjct: 405 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELF 464

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++       R+ +A +L  E EK G   ++ TYN ++ G+ RA
Sbjct: 465 QELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRA 524

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           GM+ EA  L+  M   G   D  + NII+    K G    AI++  +++   E  PD +S
Sbjct: 525 GMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKES-EIMPDAVS 583

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  +  +G  + A   +++M  +G   +  T++ ++ ++
Sbjct: 584 YNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 222/478 (46%), Gaps = 10/478 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           KR   + +  TY  L++ L ++  VD  ++ + +M    C+     ++ I+  + K   V
Sbjct: 116 KRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMV 175

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYST 205
            +A  +       +     +VYN LI  L  E   E+   L  E+   G   P+ ITYS 
Sbjct: 176 NKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSA 235

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +IS+   +   + +  +  +M   G +P    +T++L  Y    +   A  L   M  +G
Sbjct: 236 LISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKG 295

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P V  Y+ LI GL   G +D+A S+ + M ++ C P+V   + LI+   +AG L  A 
Sbjct: 296 CAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDAL 355

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL-IEKMAFENCPPNTVTFNTFIKG 384
           +++ +M S  C+PNVV Y  ++K + ++       +L  EKM      P++ T+   I G
Sbjct: 356 KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDG 415

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQL 443
            C   RV+ A+ LL++M +    P    Y  L+D L R  R + A EL  E+ E CG + 
Sbjct: 416 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCG-RS 474

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +   Y  ++      G + +A  L  +    G   D  T+N ++    + G ++ A  L+
Sbjct: 475 SARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLM 534

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +R  G   PDI S+  +L G+  +GG + A     KM    I P+  ++N ++  L
Sbjct: 535 RNMRENG-CTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCL 591



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 37/303 (12%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R+ F  +   Y  LI  L  +G +DE       M  + C      +S ++    KA  + 
Sbjct: 117 RQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVN 176

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTF 381
            A  ++ ++    C+P    Y  ++ +L       + H L  ++  E NC P+T+T++  
Sbjct: 177 KALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSAL 236

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I       R D+A +L D+MK+    P    Y  +L    ++N+V+ A  LV E++  G 
Sbjct: 237 ISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGC 296

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
              + TY  ++ G+ + G V +A+ L   ML +G K D +              +NN I 
Sbjct: 297 APTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVL-------------INNLIN 343

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +L R                       +G +++A     KM +    PN  T+N +++++
Sbjct: 344 ILGR-----------------------AGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAI 380

Query: 562 FSN 564
           F +
Sbjct: 381 FES 383



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 5/132 (3%)

Query: 24  EGVSCSEGVFI--SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           E + CS  V+   ++++   R G+ ++A  +   +RE G  P +K +N IL+ L      
Sbjct: 503 EKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGP 562

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
                +++ MK   + P+  +YN +L  L +    + A KL+ EM  KG   D+++Y++I
Sbjct: 563 KRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSI 622

Query: 142 VSSICKLGQVEE 153
           + ++   G+V+E
Sbjct: 623 LEAV---GKVDE 631


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 205/374 (54%), Gaps = 5/374 (1%)

Query: 190 EMVDRGID----PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
           E++DR ++    P+VITY+ +I + C    V  ++ +L +M  RGC P++ ++  L+ G 
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              GR  EA    N M   G  PNV+ ++ ++  +CS G   +A  +  +M    C P+V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            T++ LI+   + G L  A  I  +M ++GC+PN ++Y  ++   C+     +A   +E 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M    C P+ VT+NT +  LC  G+VD A++LL+Q+    C P + TYN ++DGL +V +
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
             +A EL+ E+   G++ +++TY++++ G+ R G V EA +    +   G K +A T+N 
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           I++  CK  + + AI  L  +   G   P  +SYT L+ GI N G  +EA   L ++ + 
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKG-CKPTEVSYTILIEGIANEGLAKEALELLNELCSR 360

Query: 546 GICPNFATWNVLVR 559
           G+    +   V+VR
Sbjct: 361 GVVKKSSAEQVVVR 374



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 189/352 (53%)

Query: 155 RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           R+L       V  Y  LI   C E  + +A  LL EM  RG  P+V+TY+ +++ +C  G
Sbjct: 6   RQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEG 65

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            ++ ++  L  M   G  PN+ +   +L+     GR  +A  L   M+R+G  P+VV ++
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI+ LC  G +  A+ +  +M  + C PN  +Y+ L+ GF K   +  A Q    M+S 
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           GC P++V Y  M+  LC++     A  L+ +++ + C P  +T+NT I GL   G+ D A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           ++LL +M+     P++ TY+ L+ GL R  +V+EA +   ++E  G++ N  TYN+I+ G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           +C+A     A   L  M+ +G K   +++ I+I     +G    A++LL+ +
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 183/344 (53%), Gaps = 5/344 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P+V TY IL++A C  + V  A KLL EMG++GC PD V+Y  +V+ +CK G+++EA + 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 158 ---AMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                 +GS  +V  +N ++  +C   +  +A  LL EMV +G  P+V+T++ +I+ LC 
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +  ++ IL +M   GC PN  S+  LL G+    +   A      M+  G  P++V 
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+T++  LC +G +D AV +  Q+    C P + TY+ +IDG +K G    A ++ + M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G  P+V+ Y+ ++  L +     +A      +      PN  T+N+ + GLC   + D
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
            A+  L  M    C P   +Y  L++G+      KEA EL+ E+
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 182/340 (53%), Gaps = 1/340 (0%)

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +   + C P++ ++T L++         +A  L + M   G  P+VV Y+ L++G+C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G +DEA+     M      PNV T++ ++      G  + A ++   M+  GCSP+VV
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +  ++  LC+  +  +A  ++EKM    C PN++++N  + G C   ++D A++ L+ M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
               C P+I TYN +L  L +  +V  A EL+ ++   G    ++TYNT++ G+ + G  
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
            +A +LL +M  +G K D IT++ +I    ++GKV  AI+    + G G   P+  +Y S
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG-VKPNAFTYNS 301

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +++G+C +     A  +L  M+++G  P   ++ +L+  +
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI 341



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 181/352 (51%), Gaps = 5/352 (1%)

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEE 183
           K C PD ++YT ++ + C    V +A +L    GS      V  YN L+NG+CKE +++E
Sbjct: 10  KECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDE 69

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A   L  M   G  PNVIT++ I+ S+C  G    +  +L +M  +GC+P++ +F  L+ 
Sbjct: 70  AIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN 129

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
                G    A D+  +M   G  PN ++Y+ L+HG C    MD A+     M    C P
Sbjct: 130 FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP 189

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ TY+ ++    K G +  A ++ N++ S GCSP ++ Y  ++  L +     QA  L+
Sbjct: 190 DIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELL 249

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M  +   P+ +T+++ I GL   G+V+ A+K    ++ +   PN  TYN ++ GL + 
Sbjct: 250 HEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKA 309

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
            +   A + +  +   G +   V+Y  ++ G+   G+  EA +LL ++   G
Sbjct: 310 QQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 183/324 (56%), Gaps = 5/324 (1%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILL 107
           QA+K+   +   G KP V  YN +++ +  E R        ++M   G +PNV T+NI+L
Sbjct: 34  QAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIIL 93

Query: 108 KALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS 166
           +++C   R   A KLL EM  KGC+P  V++  +++ +C+ G +  A ++  +  + G +
Sbjct: 94  RSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCT 153

Query: 167 ----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
                YN L++G CKE K++ A   L  MV RG  P+++TY+T++++LC  G V+ ++ +
Sbjct: 154 PNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVEL 213

Query: 223 LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCS 282
           L Q+  +GC+P + ++ +++ G    G+T +A +L + M  +G  P+V+ YS+LI GL  
Sbjct: 214 LNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSR 273

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G ++EA+   + +E     PN  TY++++ G  KA     A      MIS GC P  V+
Sbjct: 274 EGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVS 333

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKM 366
           YT +++ +    +  +A  L+ ++
Sbjct: 334 YTILIEGIANEGLAKEALELLNEL 357



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 167/306 (54%), Gaps = 1/306 (0%)

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           ++ +R + +   P+V+ Y+ LI   C+   + +A+ +  +M    C P+V TY+ L++G 
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G L  A +  N M S G  PNV+ +  +++ +C    +  A  L+ +M  + C P+ 
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VTFN  I  LC  G +  A+ +L++M  + C PN  +YN LL G  +  ++  A + +  
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G   +IVTYNT+L  +C+ G V  A +LL ++  +G     IT+N +I    K GK
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
            + A++LL  +RG G   PD+I+Y+SL+ G+   G ++EA  +   +   G+ PN  T+N
Sbjct: 242 TDQAVELLHEMRGKG-LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYN 300

Query: 556 VLVRSL 561
            ++  L
Sbjct: 301 SIMFGL 306



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 178/344 (51%), Gaps = 5/344 (1%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P V  Y  +++A  AE+       +   M   G +P+V TYN+L+  +CK  R+D A K 
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFGSGVSV--YNALINGLCK 177
           L  M + G  P+ +++  I+ S+C  G+  +A +L    +R G   SV  +N LIN LC+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           +  +  A  +L +M   G  PN ++Y+ ++   C    ++ ++  L  M  RGC P+I +
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           + ++L      G+   A +L N++  +G  P ++ Y+T+I GL   G  D+AV + ++M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
                P+V TYS+LI G ++ G +  A + ++ +   G  PN   Y  ++  LC+     
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
           +A   +  M  + C P  V++   I+G+   G    A++LL+++
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 137/270 (50%), Gaps = 7/270 (2%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           + LL +M  +G S S   F  +IN   R GL  +A+ +  ++   G  P    YN +L  
Sbjct: 106 EKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHG 165

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
              E +          M   G  P++ TYN +L ALCK+ +VD A +LL ++ +KGC+P 
Sbjct: 166 FCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPV 225

Query: 135 AVSYTTIVSSICKLGQVEEAREL--AMRFGSG----VSVYNALINGLCKEHKIEEAFWLL 188
            ++Y T++  + K+G+ ++A EL   MR G G    V  Y++LI GL +E K+EEA    
Sbjct: 226 LITYNTVIDGLSKVGKTDQAVELLHEMR-GKGLKPDVITYSSLIAGLSREGKVEEAIKFF 284

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            ++   G+ PN  TY++I+  LC     + ++  L  M  +GC P   S+T L++G    
Sbjct: 285 HDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANE 344

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           G   EA +L N +   G +    A   ++ 
Sbjct: 345 GLAKEALELLNELCSRGVVKKSSAEQVVVR 374



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 96/166 (57%), Gaps = 3/166 (1%)

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           M++LD+  + EC P++ TY  L++     + V +A +L+ E+   G + ++VTYN +++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWN 513
           +C+ G + EA + L  M   G++ + IT NII+ + C  G+  +A +LL + +R G   +
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG--CS 118

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           P ++++  L+  +C  G +  A   L+KM   G  PN  ++N L+ 
Sbjct: 119 PSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLH 164



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L +  ++D    LL Q+  +G S     + +VI+   +VG  +QA+++ + +R  G
Sbjct: 197 MLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP V  Y+ ++  L  E +       + +++  G++PN FTYN ++  LCK  + D A 
Sbjct: 257 LKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAI 316

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
             L  M +KGC P  VSYT ++  I   G  +EA EL
Sbjct: 317 DFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALEL 353



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
            ++L + L +    D IT+ I+I A C +  V  A++LLD +   G   PD+++Y  L+ 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG-CKPDVVTYNVLVN 59

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           G+C  G + EA  +L  M + G  PN  T N+++RS+ S 
Sbjct: 60  GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCST 99


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 262/561 (46%), Gaps = 48/561 (8%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           A + +  F RI+    KP  + +  +++              + +M+  G+EPNV +Y  
Sbjct: 177 ARKVVDAFKRIK----KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTN 232

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMR 160
           L+ A      + GA   + EM  +G +P+A +Y+ I+S   +LG VE A     R L+  
Sbjct: 233 LIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSEN 292

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLL------------------------CEMVDR-- 194
           +     +YN +I+  CK   +E A  ++                        C  VD+  
Sbjct: 293 WHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCL 352

Query: 195 ------------GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
                       G+ P V++Y  +I+    +G ++ +L I  +M  +G   N  +++ ++
Sbjct: 353 NVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMII 412

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            GY+  G T  A  ++  M   G  P+ + Y+ L++  C NG M+ A+ +  +ME   CP
Sbjct: 413 DGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCP 472

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P + TY+ +IDGF K G+L  A +    M   G  P+   Y  ++  L Q     +A S+
Sbjct: 473 PTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASI 532

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           I++M      PN  ++ T I+G    G +  A K  +++K+    P++  Y  LL    +
Sbjct: 533 IDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCK 592

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R++    +  E+   G+ +N   YN +L G  + G + EA  ++ KM  EG   D  +
Sbjct: 593 AGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHS 652

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +   I A CK G +  A + +++++  G   P++ +YT+L+ G  ++   ++A I   +M
Sbjct: 653 YTSFINACCKAGDMLKATETIEQMKQQG-VQPNLQAYTTLIHGWASASYPEKALICYDEM 711

Query: 543 LNEGICPNFATWNVLVRSLFS 563
            + G+ P+   ++ ++ SL S
Sbjct: 712 KSAGMIPDKPLYHCIMTSLLS 732



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/495 (24%), Positives = 234/495 (47%), Gaps = 8/495 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ G    +++M+ EGVS +   +  +I+ Y R+G  E A + F R           IYN
Sbjct: 242 DLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYN 301

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD---GAYKLLVEM 126
           +I+ A            I + M+  G+E  +  YN+L+        VD     ++ L   
Sbjct: 302 NIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKAR 361

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKI 181
              G +P  VSY  +++   KLG++++A +++      G+      Y+ +I+G  +    
Sbjct: 362 TETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDT 421

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
             AF +  +M + GI P+ ITY+ ++++ C  G +  +L +L +M    C P + ++T +
Sbjct: 422 ANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTII 481

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G++  G    A +    M   GF P+   Y+ ++HGL   G MD A S+  +M     
Sbjct: 482 IDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGV 541

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  +Y+ LI+G+A  G++  A + +NR+   G  P+V+AY  ++K  C+        +
Sbjct: 542 HPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLA 601

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +  +MA    P N   +N  + G    G +  A  ++ +M+     P+I +Y   ++   
Sbjct: 602 ITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACC 661

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +   + +A E + ++++ G+Q N+  Y T++HG   A    +A     +M   G   D  
Sbjct: 662 KAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKP 721

Query: 482 TFNIIIYAYCKQGKV 496
            ++ I+ +   +  V
Sbjct: 722 LYHCIMTSLLSRAAV 736



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/476 (24%), Positives = 214/476 (44%), Gaps = 45/476 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I   G   +++  +   Q+   E    ++ ++ ++I++Y + G  E+A  +   + E G
Sbjct: 268 IISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQG 327

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMK---RDGMEPNVFTYNILLKALCKNNRVD 117
           L+ T+ +YN ++D  +          ++  +K     G+ P V +Y  L+    K  ++D
Sbjct: 328 LEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMD 387

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALI 172
            A ++  EM ++G   +  +Y+ I+    +LG    A  +      +G+      YN L+
Sbjct: 388 KALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILM 447

Query: 173 NGLCKEHKIEEAFWLLCEM---------------VD--------------------RGID 197
           N  CK  ++  A  LL  M               +D                     G  
Sbjct: 448 NAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFR 507

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+  TY+ I+  L   G ++ +  I+ +M V G +PN  S+T+L++GY   G    A   
Sbjct: 508 PSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKY 567

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           +NR+   G  P+V+AY++L+   C  G M   ++++ +M     P N   Y+ L+DG+A+
Sbjct: 568 FNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQ 627

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G++  AS I  +M   G +P++ +YT  +   C+     +A   IE+M  +   PN   
Sbjct: 628 RGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQA 687

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           + T I G       + A+   D+MK    +P+   Y+ ++  LL  +R   A E V
Sbjct: 688 YTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTSLL--SRAAVARETV 741



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 4/265 (1%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P    ++ L++ + K G+   A   +  M + G  PNV +YT ++           A + 
Sbjct: 190 PKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIAC 249

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           +E+M  E   PN  T++  I G    G V+ A +   +        N   YN ++    +
Sbjct: 250 VEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCK 309

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV--CRA-GMVVEAFQLLGKMLIEGTKLD 479
              ++ A  ++T +E+ G++  +  YN ++ G   CRA    +  F+ L      G    
Sbjct: 310 AGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPT 369

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +++  +I  Y K GK++ A+Q+ + +   G    +  +Y+ ++ G    G    AF   
Sbjct: 370 VVSYGCLINLYSKLGKMDKALQISNEMEDQG-IKHNRKTYSMIIDGYVQLGDTANAFSVF 428

Query: 540 QKMLNEGICPNFATWNVLVRSLFSN 564
           + M N GI P+  T+N+L+ +   N
Sbjct: 429 EDMSNAGIKPDGITYNILMNAFCKN 453


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 256/544 (47%), Gaps = 10/544 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI--YNHILDALLAENRFSMINPIYSN 90
           + S+I +  +VG  +   K+   +   GL+ +     YN ++DAL    R      +   
Sbjct: 232 YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGR 291

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+   + P++ T+ IL+  L +++R      LL EM   G  P+ V    ++   C+ G 
Sbjct: 292 MEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGH 351

Query: 151 VEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             EA  L     +    S    YN +   LCKE ++E A  +L EM+  G+  +   +++
Sbjct: 352 FTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNS 411

Query: 206 IISSLCD-VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           +++ L    G +E+ + ++ +M  RG  PN    T+  K    G R  EA  +W +M+ +
Sbjct: 412 VVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEK 471

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G   N+   + LIHGLC   +M  A  V   M       +  TY+ +I G  K   +  A
Sbjct: 472 GLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEA 531

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++ + MI  G  P+   +  ++   C      +A  L+ +M  E   P+ V++ T I G
Sbjct: 532 LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
            C    +  A + L+++      PN   YN L+ G  R   +  A  ++  +E  GIQ  
Sbjct: 592 YCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPT 651

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            VTY +++H +C AG+V EA  +  +      ++  + + I+I   CK GK++ A+   +
Sbjct: 652 NVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFE 711

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +R      P+ I+YT+L++  C SG  +EA     +M++ GI P+  ++N LV   FS 
Sbjct: 712 EMRSRS-IPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTG-FSQ 769

Query: 565 LGHL 568
           +  L
Sbjct: 770 VDSL 773



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/544 (23%), Positives = 258/544 (47%), Gaps = 43/544 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIRE 58
           MI+ L +  ++D    +L  +   G+  S G   +  ++++  + G  ++A+++  R+ E
Sbjct: 235 MIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEE 294

Query: 59  FGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDG 118
             + P++  +  +++ L   +RF  +  +   M+  G+ PN    N L+   C+      
Sbjct: 295 SRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTE 354

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVSVYNALING--- 174
           A +L  EM +K     AV+Y  I  ++CK G++E A R L     +G+++++ L N    
Sbjct: 355 AIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVA 414

Query: 175 --LCKEHKIEEAFWLLCEMVDRGIDPN--------------------------------- 199
             L +  ++E    L+ EMV RG+ PN                                 
Sbjct: 415 GLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLC 474

Query: 200 --VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
             + T + +I  LC+  N++ +  +L  M  +G   +  ++  +++G     +  EA  L
Sbjct: 475 INIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKL 534

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
            + MIR+GF P+   ++++IH  C  G M+EA+ +  QM+     P+V +Y  +IDG+ K
Sbjct: 535 RDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCK 594

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A ++  A++  N +++ G  PN V Y  ++    +N     A  +++ M      P  VT
Sbjct: 595 AKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVT 654

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + + +  +C  G VD A  + +Q ++      +  Y  ++ GL ++ ++ EA     E+ 
Sbjct: 655 YCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMR 714

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
              I  N +TY T+++  C++G   EA +L  +M+  G   D +++N ++  + +   ++
Sbjct: 715 SRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLD 774

Query: 498 NAIQ 501
            AI+
Sbjct: 775 KAIE 778



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 211/447 (47%), Gaps = 37/447 (8%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSY-RRVGLAEQALKMFYRIREFGLKPTVKIY 68
           E++  + +L++M   G++   G+F SV+    +R G  E  +++   + + G+KP   + 
Sbjct: 386 EMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALM 445

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
                 L    R      I+  M   G+  N+ T N L+  LC+   + GA ++L  M N
Sbjct: 446 TACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVN 505

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           KG   D ++Y                              N +I G CK+ KIEEA  L 
Sbjct: 506 KGMELDNITY------------------------------NIMIQGCCKDSKIEEALKLR 535

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+ +G  P+   +++II + CD+G +E +L +LGQM + G  P++ S+ +++ GY   
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKA 595

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               +A++  N ++  G  PN V Y+ LI G   NG++  A+ V   ME     P   TY
Sbjct: 596 KDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY 655

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
            +L+     AG +  A  ++ +   N     VV YT M++ LC+     +A +  E+M  
Sbjct: 656 CSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRS 715

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
            + PPN +T+ T +   C  G  + A KL D+M     +P+  +YN L+ G  +V+ + +
Sbjct: 716 RSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDK 775

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGV 455
           A E   EI       +I+T N  L  V
Sbjct: 776 AIEKAAEIS------SIMTQNDCLDNV 796



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/535 (24%), Positives = 244/535 (45%), Gaps = 17/535 (3%)

Query: 55  RIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN 114
           R+  F L   V   + +  A     R   ++P+ +         +  + ++L+   C  +
Sbjct: 110 RVSAFLLPSLVADRSTLPSARRLIKRLLHLHPVQTAAAAVADASSTPSSDLLINT-CVTS 168

Query: 115 RVDGAYKLLVE----MGNKGCAPDAVSYTTIVSSICKLGQV-------EEARELAMRFGS 163
              G+ +L V+    + ++  +P   +   ++ ++ + G +       +E R+      +
Sbjct: 169 SARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPN 228

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV--ITYSTIISSLCDVGNVETSLG 221
           G S Y ++I  LCK  K+++ F +L +++  G+  +   + Y+ ++ +LC  G V+ ++ 
Sbjct: 229 GYS-YTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIR 287

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           + G+M      P++ +F  L+ G     R  E   L   M   G  PN V  + LI   C
Sbjct: 288 LKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHC 347

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G   EA+ +  +M          TY+ +     K G +  A +I   M+S G + +  
Sbjct: 348 RKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSG 407

Query: 342 AYTCMVKVLCQNN-MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
            +  +V  L Q          LI +M      PN        K LC   R   A+ +  +
Sbjct: 408 LFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLK 467

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M +     NI T N L+ GL     +K A E++  +   G++L+ +TYN ++ G C+   
Sbjct: 468 MLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSK 527

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + EA +L   M+ +G K DA  FN II+AYC  GK+  A+ LL +++  G   PD++SY 
Sbjct: 528 IEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEG-VQPDVVSYG 586

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
           +++ G C +  +Q+A  YL +++  G+ PN   +N L+     N    G + +LD
Sbjct: 587 TIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLD 641



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 37/302 (12%)

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
           + GS+  AV   + +      P+V T +AL++  A+ GNL    ++++ M    C     
Sbjct: 170 ARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEM--RDC----- 222

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
                                      +   PN  ++ + IK LC  G+VD   K+L  +
Sbjct: 223 ---------------------------KTVTPNGYSYTSMIKALCKVGKVDDGFKILSDL 255

Query: 402 KQ--YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
                +       YN L+D L +  RV EA  L   +E+  +  ++VT+  +++G+ R+ 
Sbjct: 256 IHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSD 315

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
              E   LL +M   G   + +  N +I  +C++G    AI+L D +    E     ++Y
Sbjct: 316 RFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSK-EMKSTAVTY 374

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
             +   +C  G M+ A   L++ML+ G+  +   +N +V  L    G L  V  L   M 
Sbjct: 375 NLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMV 434

Query: 580 NK 581
            +
Sbjct: 435 KR 436



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 79/170 (46%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           G    I G   +L  M+  G+  +   + S+++     GL ++A  MF + R+  ++  V
Sbjct: 628 GRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGV 687

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             Y  ++  L    +       +  M+   + PN  TY  L+ A CK+   + A KL  E
Sbjct: 688 VGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDE 747

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGL 175
           M + G  PD VSY T+V+   ++  +++A E A    S ++  + L N L
Sbjct: 748 MVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDCLDNVL 797


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 252/509 (49%), Gaps = 12/509 (2%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  ++A+ M   ++  GL  + +  N +LD  +      +   ++  M + G+ P+  ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELA 158
            +++ A C   RV  A K L  M  +G   D  + T I+ + C+ G V        + + 
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           M     V  + ALINGLCK+  I++AF LL EMV RG  PNV T++T+I  LC  G  E 
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEK 347

Query: 219 SLGILGQMFVR--GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           +  +  ++ VR  G  PN+H++T+++ GY    + + A  L +RM  +G +PN   Y+TL
Sbjct: 348 AFRLFLKL-VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C  G+   A  +   M +    PN+ TY+A+IDG  K G+L  A ++ N++  +G 
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
             + V YT ++ V C+    +++     KM      P+  ++ T I   C   ++  + +
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESER 526

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L ++      +P   TY  ++ G  R      A +L   +   G   + +TY  ++ G+C
Sbjct: 527 LFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLC 586

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           +   + +A  L   M+ +G     +T   + Y YCK+   + AI +LDR+    +W   I
Sbjct: 587 KESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLE-KRQW---I 642

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
            +  +L+  +C+ G +  A ++  K+L++
Sbjct: 643 RTVNTLVRKLCSEGKLDMAALFFHKLLDK 671



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 217/460 (47%), Gaps = 32/460 (6%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M+  G+  +  T N +L        V+ A  + VEM  +G +PD VS+  +V + C +G+
Sbjct: 180 MQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           V EA +                             WL   MV+RG   +  T + II + 
Sbjct: 240 VLEAEK-----------------------------WL-NAMVERGFIVDNATCTLIIDAF 269

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G V   +G   +M   G  PN+ +FT+L+ G    G   +A +L   M+R G+ PNV
Sbjct: 270 CQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNV 329

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
             ++TLI GLC  G  ++A  +  ++   +   PNV TY+A+I+G+ K   L  A  + +
Sbjct: 330 YTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLS 389

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM   G  PN   YT ++   C+   F +A+ L++ M  E   PN  T+N  I GLC  G
Sbjct: 390 RMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG 449

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +D A +LL+++  +    +  TY  L+    R      +     ++ K G   +I +Y 
Sbjct: 450 SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYT 509

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           T++   CR   + E+ +L  + +  G      T+  +I  YC+ G  + A++L  R+   
Sbjct: 510 TLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNH 569

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
           G   PD I+Y +L+ G+C    + +A      M+++G+ P
Sbjct: 570 G-CAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 202/393 (51%), Gaps = 2/393 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           V   ++    +  K++EA  ++ EM ++G+  +  T + ++     +G VE +  +  +M
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             RG +P+  SF  ++      GR  EA    N M+  GF+ +    + +I   C  G +
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYV 275

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           +  V   ++M E    PNV  ++ALI+G  K G++  A ++   M+  G  PNV  +T +
Sbjct: 276 NRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTL 335

Query: 347 VKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +  LC+     +A  L  K+   +   PN  T+   I G C   +++ A  LL +M++  
Sbjct: 336 IDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +PN  TY  L+DG  +V     A+EL+  + K G   NI TYN I+ G+C+ G + EA+
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +LL K+ + G + D +T+ I++  +C+Q   N ++   +++   G + PDI SYT+L+  
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG-FTPDIHSYTTLISX 514

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            C    M+E+    ++ ++ G+ P   T+  ++
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 192/382 (50%), Gaps = 2/382 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +E A  +  EM  RG+ P+ +++  ++ + C++G V  +   L  M  RG   +  + T 
Sbjct: 205 VEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTL 264

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++  +   G  +     + +M+  G  PNV+ ++ LI+GLC  GS+ +A  +  +M    
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYTCMVKVLCQNNMFHQA 359
             PNV T++ LIDG  K G    A +++ +++ S+G  PNV  YT M+   C+ +  ++A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
             L+ +M  +   PNT T+ T I G C  G    A +L+D M +    PNI TYN ++DG
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDG 444

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L +   + EA+ L+ ++   G+Q + VTY  ++   CR      +     KML  G   D
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPD 504

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             ++  +I  +C+Q ++  + +L +     G   P   +YTS++ G C  G    A    
Sbjct: 505 IHSYTTLISXFCRQKQMKESERLFEEAVSLG-LIPTKKTYTSMICGYCRYGNTSLAVKLF 563

Query: 540 QKMLNEGICPNFATWNVLVRSL 561
           Q+M N G  P+  T+  L+  L
Sbjct: 564 QRMSNHGCAPDSITYGALISGL 585



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 187/378 (49%), Gaps = 13/378 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++IN   + G  +QA ++   +   G KP V  +  ++D L  +        ++  + 
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356

Query: 93  R-DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           R DG +PNV TY  ++   CK ++++ A  LL  M  +G  P+  +YTT++   CK+G  
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             A EL        F   +  YNA+I+GLCK+  ++EA+ LL ++   G+  + +TY+ +
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           +S  C   +   SL    +M   G  P+IHS+T+L+  +    +  E+  L+   +  G 
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGL 536

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +P    Y+++I G C  G+   AV +  +M  + C P+  TY ALI G  K   L  A  
Sbjct: 537 IPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARN 596

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +++ M+  G SP  V    +    C+ +    A ++++++          T NT ++ LC
Sbjct: 597 LYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLC 653

Query: 387 GCGRVDWAM----KLLDQ 400
             G++D A     KLLD+
Sbjct: 654 SEGKLDMAALFFHKLLDK 671



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 200/414 (48%), Gaps = 23/414 (5%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+++ + G   + +  F+++ E GL P V  +  +++ L  +        +   M R G
Sbjct: 265 IIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRG 324

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            +PNV+T+  L+  LCK    + A++L +++  + G  P+  +YT +++  CK  ++  A
Sbjct: 325 WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRA 384

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L  R          + Y  LI+G CK      A+ L+  M   G  PN+ TY+ II  
Sbjct: 385 EMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDG 444

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G+++ +  +L ++ V G   +  ++T L+  +     T+ +   +N+M++ GF P+
Sbjct: 445 LCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPD 504

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           + +Y+TLI   C    M E+  +  +       P   TY+++I G+ + GN   A +++ 
Sbjct: 505 IHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM ++GC+P+ + Y  ++  LC+ +    A +L + M  +   P  VT  T     C   
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 390 RVDWAMKLLDQMKQYECLPNITT-----------------YNELLDGLLRVNRV 426
               A+ +LD++++ + +  + T                 +++LLD    VNRV
Sbjct: 625 DSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRV 678



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 157/333 (47%), Gaps = 10/333 (3%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
             +  L+ ++ +G   +   + ++IN Y +     +A  +  R++E GL P    Y  ++
Sbjct: 348 AFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           D       F     +   M ++G  PN++TYN ++  LCK   +D AY+LL ++   G  
Sbjct: 408 DGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQ 467

Query: 133 PDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
            D V+YT ++S  C+      +     + L + F   +  Y  LI+  C++ +++E+  L
Sbjct: 468 ADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERL 527

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             E V  G+ P   TY+++I   C  GN   ++ +  +M   GC P+  ++ +L+ G   
Sbjct: 528 FEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCK 587

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             +  +A +L++ M+ +G  P  V   TL +  C       A++V  ++E+      + T
Sbjct: 588 ESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRT 644

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
            + L+      G L  A+  +++++     PNV
Sbjct: 645 VNTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 144/300 (48%), Gaps = 3/300 (1%)

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           ++     NG + EAV++  +M+      +  T + ++D     G +  A  ++  M   G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
            SP+ V++  MV   C      +A   +  M       +  T    I   C  G V+  +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
               +M +    PN+  +  L++GL +   +K+AFEL+ E+ + G + N+ T+ T++ G+
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 456 CRAGMVVEAFQLLGKML-IEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
           C+ G   +AF+L  K++  +G K +  T+  +I  YCK+ K+N A  LL R++  G   P
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG-LVP 398

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYIL 574
           +  +YT+L+ G C  G    A+  +  M  EG  PN  T+N ++  L    G L   Y L
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKK-GSLDEAYRL 457



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 7/274 (2%)

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           ++  FA+ G L  A  +   M + G   +     C++ V     +   A ++  +M    
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR---VNRVK 427
             P+ V+F   +   C  GRV  A K L+ M +   + +  T   ++D   +   VNRV 
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
             F  + E+   G+  N++ +  +++G+C+ G + +AF+LL +M+  G K +  T   +I
Sbjct: 280 GYFWKMVEM---GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLI 336

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              CK+G    A +L  ++     + P++ +YT+++ G C    +  A + L +M  +G+
Sbjct: 337 DGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGL 396

Query: 548 CPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            PN  T+  L+      +G+    Y L D+M  +
Sbjct: 397 VPNTNTYTTLIDG-HCKVGNFVRAYELMDLMGKE 429



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/270 (20%), Positives = 117/270 (43%), Gaps = 35/270 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +K  +D    LL ++ V G+      +  +++ + R     ++L  F ++ + G
Sbjct: 441 IIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVG 500

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  Y  ++     + +      ++      G+ P   TY  ++   C+      A 
Sbjct: 501 FTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAV 560

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           KL   M N GCAPD+++Y  ++S +CK  ++++AR L          Y+A          
Sbjct: 561 KLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL----------YDA---------- 600

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                     M+D+G+ P  +T  T+    C   +  T++ +L ++  R     I +  +
Sbjct: 601 ----------MMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNT 647

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           L++     G+   A+  +++++ +   PNV
Sbjct: 648 LVRKLCSEGKLDMAALFFHKLLDKE--PNV 675


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 275/590 (46%), Gaps = 44/590 (7%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V+ L  +M   GV   E V+   I+   ++  A++AL++  ++RE G +P    Y+ +
Sbjct: 203 DAVR-LFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSV 261

Query: 72  LDALLAENRFSMINPIYSNMK-RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +D L+   R      +   M    G + +V    +L+   C +  V  A  L  E+ + G
Sbjct: 262 VDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDG 321

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSVY--NALINGLCKEHKIEEAF 185
             P  V+Y  ++      G  +E  +L  +    G  +S Y  N +I GL ++ + ++A 
Sbjct: 322 VTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAI 381

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            LL  +VD G+ P+V TY  +I  LC    +  ++ +  +M   G  P+I ++ SLL GY
Sbjct: 382 GLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGY 440

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN--SCP- 302
              GR  EA  L++ M  +GF PN V Y+TL+ G     + D A ++  +M +N  SC  
Sbjct: 441 CEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGD 500

Query: 303 --------------------------------PNVTTYSALIDGFAKAGNLLGASQIWNR 330
                                           P   TY+++I+GF KAG +  A  ++ +
Sbjct: 501 YTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQ 560

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   G +PN+V YT  +   C+ N    A  L+  +  +   P+   +N FI   C  G 
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A+  L  + +    P++T YN  + G   +  + EA +    + K  +  +   Y T
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTT 680

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G  + G V  A +L  +M+      D  TF  + +  C+ G ++ A +LLD +R   
Sbjct: 681 LIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMR-RL 739

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           + +P+I++Y  L+      G +QEAF    +ML+ G+ P+  T+++L R+
Sbjct: 740 DVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 272/570 (47%), Gaps = 12/570 (2%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
            +M   GV         ++ +  R   A  AL +F  +R  G     K+Y+ ++ A +  
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                   ++  M   G++P+   Y I +  LCK    D A ++L +M   G  P  ++Y
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 139 TTIVSSICKLGQVEEARELA--MRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMV 192
           +++V  + K+G+++EA  L   M   +G    V +   L++G C   ++ +A  L  E+V
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 193 DRGIDPNVITYSTIISSLCDV-GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             G+ P  +TY  +I   CD  G  + +  +  QM  +G   + + F  ++KG L   R 
Sbjct: 319 SDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L   ++  G +P+V  Y  LIH LC +  + EAV++  +M+E    P++ TY +L
Sbjct: 378 KDAIGLLELVVDTG-VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G+ + G +  A ++++ M   G  PN V YT ++K   +   F  A++L+ +M     
Sbjct: 437 LLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGV 496

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
                T+N  I GL    RV    ++L +      +P   TYN +++G ++   +  AF 
Sbjct: 497 SCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFG 556

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++ K GI  NIVTY + + G CR      A +LL  +  +G + D   +N  I  +C
Sbjct: 557 MYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFC 616

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           KQG ++ A+  L  +   G   PD+  Y S + G  N   M EA  +   M+ + +  + 
Sbjct: 617 KQGNMSRALHFLVLLLKDG-LTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADT 675

Query: 552 ATWNVLVRSLFSNLGHLG-PVYILDDIMAN 580
             +  L+   FS +G++   + +  ++MAN
Sbjct: 676 EIYTTLIDG-FSKVGNVAFALELYSEMMAN 704



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 5/310 (1%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K   D    LL +M+  GVSC +  +  +IN    V    +  +M  R    G  PT  
Sbjct: 477 KKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN I++  +          +Y  M++ G+ PN+ TY   +   C+ N  D A KLL+ +
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYV 596

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARE---LAMRFG--SGVSVYNALINGLCKEHKI 181
              G  PD  +Y   + + CK G +  A     L ++ G    V+VYN+ + G      +
Sbjct: 597 RRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMM 656

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA      M+ + +  +   Y+T+I     VGNV  +L +  +M      P+  +FT+L
Sbjct: 657 AEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTAL 716

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
             G    G    A  L + M R    PN+V Y+ LI+    +G + EA  +  +M  +  
Sbjct: 717 THGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGV 776

Query: 302 PPNVTTYSAL 311
            P+ TTY  L
Sbjct: 777 VPDDTTYDIL 786



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/373 (22%), Positives = 162/373 (43%), Gaps = 30/373 (8%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           EK  +D    L  +M  +G   +E  + +++  Y +    + A  +   +R+ G+     
Sbjct: 442 EKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDY 501

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            YN +++ L   NR   ++ +      +G  P   TYN ++    K   +  A+ +  +M
Sbjct: 502 TYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQM 561

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
             KG  P+ V+YT+                               I+G C+ +  + A  
Sbjct: 562 RKKGITPNIVTYTS------------------------------FIDGYCRTNCCDLAVK 591

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           LL  +   GI P++  Y+  I + C  GN+  +L  L  +   G  P++  + S + GY 
Sbjct: 592 LLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYK 651

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                 EAS  +  MI++  + +   Y+TLI G    G++  A+ +  +M  N   P+  
Sbjct: 652 NLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDK 711

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T++AL  G  ++G++ GA ++ + M     SPN+V Y  ++    ++    +A  L ++M
Sbjct: 712 TFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEM 771

Query: 367 AFENCPPNTVTFN 379
                 P+  T++
Sbjct: 772 LSSGVVPDDTTYD 784



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 44/341 (12%)

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           ++RM+  G +P+  + + L+       S  +A+++  +M    C  +   Y  +I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G    A ++++ M   G  P+   Y   +  LC+     +A  ++ KM      P  +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQM-----KQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           +++ +  L   GR+D A++L DQM     K+ +    +     L+ G      V +A +L
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMD----VVLATMLMHGYCLHGEVGKALDL 313

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII----- 487
             E+   G+    VTY  ++ G    GM  E ++L  +M+ +G  L    FN++I     
Sbjct: 314 FDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLR 373

Query: 488 ----------------------YAY-------CKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
                                 + Y       CK  K++ A+ L D+++  G   P I++
Sbjct: 374 DKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG-VKPSIVT 432

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           Y SLL G C  G M EA     +M ++G  PN  T+  L++
Sbjct: 433 YHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMK 473



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 121/239 (50%), Gaps = 4/239 (1%)

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++RM++ G  P+  + T ++    +      A +L ++M  + C  +   ++  I+    
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G    A++L D+M      P+   Y   + GL ++     A +++ ++ + G +   +T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIE-GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           Y++++  + + G + EA +L  +ML+  G K+D +   ++++ YC  G+V  A+ L D +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGM-QEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
              G   P  ++Y  L+ G C++ GM  E +   ++M+ +G+  +   +N++++ L  +
Sbjct: 318 VSDG-VTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRD 374


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/384 (32%), Positives = 205/384 (53%), Gaps = 6/384 (1%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PN  TY+ +I +LC+ G V  +L +L  M  RGC P++ ++  LL+    G    +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           +L + M  EG  PN V Y+ L+ G+C  G +D+A+ +   +  + C P+   Y+ ++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
             A     A ++   M+   C PN   +  ++  LC+  +  QA  L+EKM+   C  N 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VT+N  I GLC    VD AM LL +MK Y C P+I TYN LL GL    R  +A EL+  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           + + G   + VT+NT++  +C+ G++V+A ++  +M  +G   ++IT++ II    K  K
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
           ++ A++L + +   G +NPD I Y  L   + +   ++EA   ++K+ + GI P+   +N
Sbjct: 303 LDQALELFNEMGHKG-FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYN 360

Query: 556 VLVRSLFSNLGHLGPVYILDDIMA 579
            ++  L  N    G      DIMA
Sbjct: 361 AILLGLCRN----GKTEFAIDIMA 380



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 226/465 (48%), Gaps = 37/465 (7%)

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           ++PN +TYN L+  LC+  +V  A  +L +M  +GCAPD V+                  
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVT------------------ 44

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                       YN L+   CK     +A  L+  M   G  PN +TY+ ++  +C  G+
Sbjct: 45  ------------YNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD 92

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V+ +L +L  +   GC P+  ++ ++LKG     R  +A +L   M+RE   PN   ++ 
Sbjct: 93  VDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNV 152

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           +I+ LC  G + +A+ +  +M ++ C  N+ TY+A+I+G  +  N+ GA  + ++M S G
Sbjct: 153 VIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYG 212

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
           C P++V Y  ++K LC    +  A  L++ M    C P+ VTFNT I  LC  G +  A+
Sbjct: 213 CKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAI 272

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++  QM    C PN  TY+ ++ GL +  ++ +A EL  E+   G   + + Y  +   +
Sbjct: 273 EVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECL 331

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
                + EA Q + K+   G     + +N I+   C+ GK   AI ++  +   G   PD
Sbjct: 332 NDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSG-CMPD 390

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            ++Y  L+ G+   G + EA   L K+     C      N L++S
Sbjct: 391 DLTYVILIEGLAYEGYLNEARELLIKL-----CSRDVLVNSLIKS 430



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 213/410 (51%), Gaps = 6/410 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            +  +I++    G    AL +   +   G  P V  YN +L+A      +     +   M
Sbjct: 9   TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + +G  PN  TYN+L+  +C    VD A +LL  + + GC P  V+Y T++  +C   + 
Sbjct: 69  RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128

Query: 152 EEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
            +A EL             + +N +I  LC++  +++A  LL +M   G   N++TY+ I
Sbjct: 129 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAI 188

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+ LC+  NV+ ++G+L +M   GC P+I ++ +LLKG     R  +A +L + M + G 
Sbjct: 189 INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGC 248

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           LP+ V ++TLI  LC  G M +A+ V  QM +  C PN  TYS +I G AKA  L  A +
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 308

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++N M   G +P+ + Y  + + L  ++   +A   + K+      P+TV +N  + GLC
Sbjct: 309 LFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLC 367

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
             G+ ++A+ ++  M    C+P+  TY  L++GL     + EA EL+ ++
Sbjct: 368 RNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 206/395 (52%), Gaps = 2/395 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
            YN LI+ LC+  ++ +A  +L +M+ RG  P+V+TY+ ++ + C       ++ ++  M
Sbjct: 9   TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
              GC PN  ++  L+ G    G   +A +L   +   G  P+ V Y+T++ GLCS    
Sbjct: 69  RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            +A  +  +M   +CPPN  T++ +I    + G L  A Q+  +M  +GC+ N+V Y  +
Sbjct: 129 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAI 188

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+      A  L+ KM    C P+ VT+NT +KGLC   R   A +L+D M Q  C
Sbjct: 189 INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGC 248

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           LP+  T+N L+  L +   + +A E+  ++   G   N +TY+TI+ G+ +A  + +A +
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 308

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           L  +M  +G   D I + ++         +  AIQ + +++  G  +P  + Y ++L G+
Sbjct: 309 LFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSG-ISPHTVLYNAILLGL 366

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           C +G  + A   +  M++ G  P+  T+ +L+  L
Sbjct: 367 CRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 401



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 187/372 (50%), Gaps = 11/372 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  M+ EG + +   +  +++     G  + AL++   +   G KP+   YN +L  L 
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
           +  R+   + + + M R+   PN  T+N+++ +LC+   +  A +LL +M   GC  + V
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  I++ +C+   V+ A  L  +  S      +  YN L+ GLC   +  +A  L+  M
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P+ +T++T+I  LC  G +  ++ +  QM  +GC PN  ++++++ G     + 
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A +L+N M  +GF P+ + Y  L   L  + +++EA+    +++++   P+   Y+A+
Sbjct: 304 DQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAI 362

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  + G    A  I   M+S+GC P+ + Y  +++ L      ++A  L+ K+   + 
Sbjct: 363 LLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD- 421

Query: 372 PPNTVTFNTFIK 383
               V  N+ IK
Sbjct: 422 ----VLVNSLIK 429



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 130/244 (53%), Gaps = 1/244 (0%)

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PN   Y  ++  LC+      A S+++ M    C P+ VT+N  ++  C       AM+
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L+D M+   C PN  TYN L+DG+     V +A EL+  +   G + + V YNT+L G+C
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
            A    +A +L+ +ML E    +  TFN++IY+ C++G +  AIQLL+++   G    +I
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG-CTANI 182

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
           ++Y +++ G+C    +  A   L KM + G  P+  T+N L++ L S    +    ++D+
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 577 IMAN 580
           +  N
Sbjct: 243 MTQN 246


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 262/534 (49%), Gaps = 7/534 (1%)

Query: 37  INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM 96
           IN  + V   + A+ +F+R+      P+V  ++ +   ++    +S +  ++  M+  G+
Sbjct: 34  INFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGI 93

Query: 97  EPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE 156
             +    NI+  + C  +R+D A+ +L      G   + V++ T++  +    +V +A  
Sbjct: 94  PISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVV 153

Query: 157 LAMRF------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           L  +            +Y  ++NGL K    E+   LL  M      P+V TYS +I +L
Sbjct: 154 LFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C   N++ ++ +L +M  +   PNI ++ SL+ G    G+  +   L + M+     PNV
Sbjct: 214 CKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNV 273

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             +S LI GLC  G +++A  V   M E    P++ TYSA++DG+   G +  A +++N 
Sbjct: 274 HTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNV 333

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           +   G  PN+ +Y+ ++   C+     +A  L  +++ +   P+TVT++T + GL   GR
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +  A K+ D+M +    P+I  ++ LL G  +   V+EA  L +++E+     NI  Y  
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +++G+C+   V EA  +  K+   G   D  T+N++I  +C++G  +    +L ++   G
Sbjct: 454 VINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
               + I+Y  ++ G   S  + E   ++++M   G   +  T  VL+  L  N
Sbjct: 514 -CPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 238/484 (49%), Gaps = 12/484 (2%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            V  L ++M++ G+  S+ +   V NSY    R+  A   L ++ +    G+   V  +N
Sbjct: 80  AVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYLKT---GIPFNVVTFN 136

Query: 70  HILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
            +L  L AEN+ +    ++  + R+ + EPN   Y  ++  L K    +    LL  M  
Sbjct: 137 TLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQ 196

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEE 183
               PD  +Y+ ++ ++CK   ++ A  L            +  YN+LI+GLCK  + E+
Sbjct: 197 GNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEK 256

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              LL EMV+  I+PNV T+S +I  LC  G VE +  ++  M  +G  P+I ++++++ 
Sbjct: 257 VKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMD 316

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY L G+   A  ++N +  +G  PN+ +YS LI+G C   ++ +A+ +  ++ +    P
Sbjct: 317 GYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKP 376

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TYS ++ G  + G +  A +I++ M+  G +P++  ++ ++    +  +  +A  L 
Sbjct: 377 DTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLF 436

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            K+       N   +   I GLC   RV  A  + +++     +P++ TYN ++ G  R 
Sbjct: 437 SKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCRE 496

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
               E   ++ ++E  G   N +TYN I+ G  R+  + E    + +M   G   DA T 
Sbjct: 497 GLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTT 556

Query: 484 NIII 487
            ++I
Sbjct: 557 GVLI 560



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 145/295 (49%), Gaps = 5/295 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L ++ +++    +++ M  +GV      + ++++ Y   G  ++A ++F  +R+ G
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +KP +  Y+ +++    +   +    ++  + + G++P+  TY+ +L  L +  R+  A 
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
           K+  EM   G  PD   ++T++    K G VEEA  L  +       + +S Y  +INGL
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  ++ EA  +  ++   G+ P+V TY+ +I+  C  G  +   GIL +M   GC  N 
Sbjct: 459 CKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANN 518

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            ++  +++G+    +  E       M   GF  +      LI+ L  N S+ + +
Sbjct: 519 ITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 271/545 (49%), Gaps = 15/545 (2%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN-RFSMINPIYS 89
             + ++++++ R G    A+ +F R+ + G++P +  YN +  A    +  +  +  +  
Sbjct: 185 SAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVD 244

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           +MK DG+E + +TYN L+    +      A ++  EM   G  PD V++ +++    K  
Sbjct: 245 SMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKAR 304

Query: 150 QVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           + EEA  +  R  +      V  YN+LI+   K+  +EEA  L  EM  RG+ P+V+TY+
Sbjct: 305 KHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 364

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+IS L  VG ++ +L    +M   GC+PN+ ++ +L+K + + G+  E   +++ +   
Sbjct: 365 TLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSA 424

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G++P+VV ++TL+     NG   E   V  +M++    P   TY +LI  +++ G    A
Sbjct: 425 GYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQA 484

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +I+ RMI  G  P++  Y  ++  L +   + QA  L  +M   +C P+ +++++ +  
Sbjct: 485 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHA 544

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL----RVNRVKEAFELVTEIEKCG 440
                ++D  MK L +    E    I  +N L+  L+    +VN + E  +   E+ +  
Sbjct: 545 YANAKKLD-KMKTLSEDIYAE---RIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRR 600

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             L+I   N ++    +  MV +  ++L  M+       A T+N +++ Y + G      
Sbjct: 601 CSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCE 660

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +L  I+  G   PD  SY ++++     G M+EA     +M   G+ P+  T+N+ ++S
Sbjct: 661 SILTEIKSSG-MRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS 719

Query: 561 LFSNL 565
             +N+
Sbjct: 720 YVANI 724



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/566 (22%), Positives = 251/566 (44%), Gaps = 43/566 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  MK +G+      + ++I+  RR GL  +A ++F  ++  G +P    +N +LD   
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYG 301

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      +   M+  G  P+V TYN L+ A  K+  ++ A +L  EM  +G  PD V
Sbjct: 302 KARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 361

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +YTT++S + ++G                              KI+ A     EMV  G 
Sbjct: 362 TYTTLISGLDRVG------------------------------KIDAALATYSEMVRNGC 391

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PN+ TY+ +I      G     + +   +   G  P++ ++ +LL  +   G   E S 
Sbjct: 392 SPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSG 451

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           ++  M + G++P    Y +LI      G  D+A+ +  +M E    P+++TY+A++   A
Sbjct: 452 VFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALA 511

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           + G    A +++  M+   C P+ ++Y+ ++          +  +L E +  E    +  
Sbjct: 512 RGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNW 571

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
              T +        +    K   ++++  C  +I   N ++    +   VK+  E+++ +
Sbjct: 572 LVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLM 631

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            +  I  +  TYN+++H   R G   +   +L ++   G + D  ++N +IYAY ++G++
Sbjct: 632 MENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQM 691

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN- 555
             A +L   ++  G   PDI++Y   +     +   +EA   ++ ++ +G  PN  T+N 
Sbjct: 692 KEASRLFSEMKCSG-VKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNS 750

Query: 556 -----------VLVRSLFSNLGHLGP 570
                      V  +S  SNL  + P
Sbjct: 751 ILQGYSRHGRMVEAKSFLSNLPKIYP 776



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 192/429 (44%), Gaps = 37/429 (8%)

Query: 32  VFISVINSYRRVG-LAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           V  + I  + R G LAE +      I E    P    Y  ++ A     RF     ++  
Sbjct: 155 VLPTAIRVFARAGCLAEASA-----ILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQR 209

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSICKLG 149
           M   G++P + TYN++  A  K +        LV+ M   G   D  +Y T++S   + G
Sbjct: 210 MVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRG 269

Query: 150 QVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                                        H+  EA  +  EM   G +P+ +T+++++  
Sbjct: 270 L----------------------------HR--EAAQVFDEMKAAGFEPDKVTFNSLLDV 299

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                  E ++G+L +M   GC P++ ++ SL+  Y+  G   EA +L   M   G  P+
Sbjct: 300 YGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPD 359

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+TLI GL   G +D A++   +M  N C PN+ TY+ALI      G       +++
Sbjct: 360 VVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFD 419

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            + S G  P+VV +  ++ V  QN +  +   + ++M      P   T+ + I     CG
Sbjct: 420 DLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 479

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
             D AM++  +M +    P+I+TYN +L  L R  R ++A +L  E+     + + ++Y+
Sbjct: 480 LFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYS 539

Query: 450 TILHGVCRA 458
           ++LH    A
Sbjct: 540 SLLHAYANA 548


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 234/471 (49%), Gaps = 9/471 (1%)

Query: 99  NVFTYNILLKALCKNNRVDG-AYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           +  +YN+++  L +  R  G A  LL EM  +G   DAV+  T + ++C+ GQVE A  L
Sbjct: 127 DTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAAL 186

Query: 158 AMRFGSGVSVY-------NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           A     G  ++       NAL++G CK   +E A      M  +G+  +V+ Y+T+++ L
Sbjct: 187 AEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGL 246

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G  + + G+L  M   G  PN+ ++T+ +          +A  L+  M+R G LP+V
Sbjct: 247 CRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDV 306

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V  S L+ GLC  G   EA ++  +ME+    PN  TY  LID   KA     +  +   
Sbjct: 307 VTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGE 366

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           ++S G   ++V YT ++  L +     +   +      +N  PN VT+   I  LC  G 
Sbjct: 367 VVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGN 426

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           VD A ++L +M+     PN+ T++ +++GL +   + +A + + ++++ GI  N+VTY T
Sbjct: 427 VDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGT 486

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           ++ G  +      A  L  +ML EG +++    ++++    K GK+  A  L   +   G
Sbjct: 487 VMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRG 546

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
               D ++YT+L+ G+   G M  AF   Q++    + P+   +NV V  L
Sbjct: 547 MLL-DHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCL 596



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 133/479 (27%), Positives = 220/479 (45%), Gaps = 43/479 (8%)

Query: 68  YNHILDALLAENRFSMINP-IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           YN ++  L  + R   + P + + M + G+  +  T N  L ALC++ +V+GA  L   M
Sbjct: 131 YNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMM 190

Query: 127 --GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF---GSGVSV--YNALINGLCKEH 179
             G +    D V +  ++   CK G +E A   A R    G GV V  YN L+ GLC+  
Sbjct: 191 VRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAG 250

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           + + A  +L  M   G++PNV+TY+T I+  C    V+ +  +  +M   G  P++ + +
Sbjct: 251 EADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLS 310

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI------------HGLC------ 281
           +L+ G    GR  EA  L+  M + G  PN V Y TLI            HGL       
Sbjct: 311 ALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSR 370

Query: 282 -----------------SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
                              G +DE   + +    ++  PN  TY+ LID   +AGN+ GA
Sbjct: 371 GVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGA 430

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            Q+   M      PNVV ++ ++  L +  +  +A   + KM      PN VT+ T + G
Sbjct: 431 EQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDG 490

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
              C   + A+ L  +M       N    + L++GL +  +++EA  L  ++ K G+ L+
Sbjct: 491 FFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLD 550

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            V Y T++ G+ + G +  AF++  ++       DA+ +N+ +   C  GK   A  +L
Sbjct: 551 HVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 213/460 (46%), Gaps = 9/460 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQAL---KMFYRIREFGLKPTVKIYNHILD 73
           LL +M   GV        + + +  R G  E A    +M  R RE   +  V  +N +LD
Sbjct: 151 LLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAALAEMMVRGREIH-RLDVVGWNALLD 209

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
                            M+  G+  +V  YN L+  LC+    D A  +L  M   G  P
Sbjct: 210 GYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEP 269

Query: 134 DAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLL 188
           + V+YTT ++  C+   V++A  L    +R G    V   +AL++GLC+  +  EA+ L 
Sbjct: 270 NVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALF 329

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM   G  PN +TY T+I SL        S G+LG++  RG   ++  +TSL+      
Sbjct: 330 REMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQ 389

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  E  D+++  + +   PN V Y+ LI  LC  G++D A  +  +ME+ S  PNV T+
Sbjct: 390 GKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTF 449

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           S++I+G  K G L  A+    +M   G  PNVV Y  ++    +      A  L  +M  
Sbjct: 450 SSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLC 509

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           E    N    +  + GL   G+++ A  L   M +   L +   Y  L+DGL ++  +  
Sbjct: 510 EGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPA 569

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           AF++  E+ +  +  + V YN  ++ +C  G   EA  +L
Sbjct: 570 AFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 204/431 (47%), Gaps = 36/431 (8%)

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSV-YNALINGLCKEHKIEE-AFWLLCEM 191
           D +S  +I+ S C L  +  A  L     S  +V YN +I+GL ++ +    A  LL EM
Sbjct: 96  DPLSLNSILLSHCALRSLRPALALLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEM 155

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RG+  + +T +T + +LC  G VE +   L +M VRG                     
Sbjct: 156 CKRGVPFDAVTVNTALVALCRDGQVEGA-AALAEMMVRG--------------------- 193

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
                      RE    +VV ++ L+ G C +G M+ A++ + +M       +V  Y+ L
Sbjct: 194 -----------REIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTL 242

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G  +AG    A  +   M  +G  PNVV YT  +   C+ N    A SL E+M     
Sbjct: 243 VAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGV 302

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+ VT +  + GLC  GR   A  L  +M++    PN  TY  L+D L +  R  E+  
Sbjct: 303 LPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHG 362

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ E+   G+ +++V Y +++  + + G + E   +    L +    + +T+ ++I A C
Sbjct: 363 LLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALC 422

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           + G V+ A Q+L  +      +P++++++S++ G+   G + +A  Y++KM   GI PN 
Sbjct: 423 RAGNVDGAEQMLLEMEDK-SVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNV 481

Query: 552 ATWNVLVRSLF 562
            T+  ++   F
Sbjct: 482 VTYGTVMDGFF 492



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 11/362 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           E D  + +L+ MK +GV  +   + + I    R    + A  ++  +   G+ P V   +
Sbjct: 251 EADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLS 310

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    RFS    ++  M++ G  PN  TY  L+ +L K  R   ++ LL E+ ++
Sbjct: 311 ALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSR 370

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALINGLCKEHKI 181
           G   D V YT+++  + K G+++E +++   F   +S         Y  LI+ LC+   +
Sbjct: 371 GVVMDLVMYTSLMDWLGKQGKIDEVKDM---FHCALSDNHTPNGVTYTVLIDALCRAGNV 427

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
           + A  +L EM D+ + PNV+T+S+II+ L   G +  +   + +M  RG +PN+ ++ ++
Sbjct: 428 DGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTV 487

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G+        A DL++ M+ EG   N      L++GL  NG M+EA ++   M +   
Sbjct: 488 MDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGM 547

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
             +   Y+ LIDG  K GN+  A ++   +     SP+ V Y   V  LC      +A S
Sbjct: 548 LLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAES 607

Query: 362 LI 363
           ++
Sbjct: 608 IL 609



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 5/193 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L     +DG + +L +M+ + V  +   F S+IN   + GL  +A     +++E G
Sbjct: 417 LIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERG 476

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y  ++D             +Y  M  +G+E N F  ++L+  L KN +++ A 
Sbjct: 477 IDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAE 536

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
            L  +M  +G   D V+YTT++  + K+G +  A    +EL  R       VYN  +N L
Sbjct: 537 ALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCL 596

Query: 176 CKEHKIEEAFWLL 188
           C   K +EA  +L
Sbjct: 597 CMLGKSKEAESIL 609


>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
 gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
          Length = 854

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 154/565 (27%), Positives = 265/565 (46%), Gaps = 46/565 (8%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G    A K+F  +   G +P + I+N ++  L       +   +   M R  + P+  
Sbjct: 203 RGGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDAC 262

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
           +YNIL+K  C   + + A+ L  EM   GC P  V+Y  +++ +C+ G++ EAR L    
Sbjct: 263 SYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEM 322

Query: 161 FGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI---------- 206
             +GV V    +N LI+G  K  ++E A     EM   G+ P+  T++ +          
Sbjct: 323 LQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKA 382

Query: 207 --------------------------ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                                     I  LC  G ++ +  +L     +G   ++  F +
Sbjct: 383 ALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNA 442

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA-VSVSYQMEEN 299
           L+  Y   G   EA +L+  M + G  P+    + LI GLC+ G +D+A + + Y +   
Sbjct: 443 LIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMG 502

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
            C   + +++  +D   +AG++LGA + W+ M   G  P+ VA++  V  LC+ +   +A
Sbjct: 503 YCV--IASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEA 560

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
           ++   +M      PN  T+N+ I   C  G V  A+KL  +M+Q   +P+I T N L+DG
Sbjct: 561 YNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDG 620

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             R   +  A  L   +   G+  ++VTYNT+L+  CR+  +  A   + KML +G + D
Sbjct: 621 FCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPD 680

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T+NI +++ C    +N A+ LLD +    +  P+ ++Y +L+ GIC S  +  A I  
Sbjct: 681 IFTYNIWMHSLCSNHLLNRAMMLLDEL-AATDCAPNSVTYNTLMDGIC-SDVLDRAMILT 738

Query: 540 QKMLNEGICPNFATWNVLVRSLFSN 564
            +++     PN  T N+L      N
Sbjct: 739 GRLIKLAFQPNTVTINILFSHFCKN 763



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 231/522 (44%), Gaps = 76/522 (14%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G AE A  +F  +R  G  PT+  YN +++ L  E R      ++  M + G+E N  T+
Sbjct: 275 GQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITF 334

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSS------------------- 144
           N+L+    K  +++ A     EM   G  PD  ++  + +                    
Sbjct: 335 NVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHE 394

Query: 145 --------------ICKL---GQVEEAREL---AMRFGSGVSV--YNALINGLCKEHKIE 182
                         IC+L   G++++A EL   A+  G  VSV  +NALI    KE   E
Sbjct: 395 MFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDE 454

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS----------------------- 219
           EAF L   M   G+ P+  T + +I  LC+ G ++ +                       
Sbjct: 455 EAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGYCVIASFTIYLD 514

Query: 220 --------LGIL---GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
                   LG L     M + G  P+  +F++ + G        EA + +  MIR G +P
Sbjct: 515 SSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVP 574

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           N   Y++LI   C  G++ EA+ +  +M ++   P++ T + LIDGF + G L  A+ ++
Sbjct: 575 NNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLF 634

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M S G +P+VV Y  M+   C++   + A   + KM  + C P+  T+N ++  LC  
Sbjct: 635 FGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSN 694

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
             ++ AM LLD++   +C PN  TYN L+DG+   + +  A  L   + K   Q N VT 
Sbjct: 695 HLLNRAMMLLDELAATDCAPNSVTYNTLMDGICS-DVLDRAMILTGRLIKLAFQPNTVTI 753

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           N +    C+ G    A     K+  +    D  T NI+ +AY
Sbjct: 754 NILFSHFCKNGFGKRALVWAEKLRDDSFNFDDATRNILDWAY 795



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 129/528 (24%), Positives = 222/528 (42%), Gaps = 37/528 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            ++++   G+A++AL +  R+R  G  P++     +L  L           ++  M   G
Sbjct: 162 ALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEMAARG 221

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             PN+  +N ++  LC    V  +  LL  MG     PDA S                  
Sbjct: 222 PRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACS------------------ 263

Query: 156 ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                       YN L+ G C   + E+AF L  EM   G  P ++TY+ +++ LC  G 
Sbjct: 264 ------------YNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGR 311

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           +  +  +  +M   G   N  +F  L+ GY   G+   A+     M   G +P+   ++ 
Sbjct: 312 MVEARMLFDEMLQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNI 371

Query: 276 LIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
           L  G    G     V    Q+ E      +      LI      G L  A ++    I  
Sbjct: 372 LSAGAYKFGKAALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEK 431

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G   +V  +  ++    +     +A  L + M      P++ T N  I GLC  GR+D A
Sbjct: 432 GVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQA 491

Query: 395 MKLLDQMKQ--YECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
              L+ M +  Y  + + T Y   LD   R   V  A +   +++  G+Q + V ++  +
Sbjct: 492 RLFLEYMVRMGYCVIASFTIY---LDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYV 548

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G+CR   + EA+    +M+  G   +  T+N +I A+C+ G V+ A++L  ++R  G  
Sbjct: 549 NGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSG-L 607

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            PDI +   L+ G C  GG+  A      M + G+ P+  T+N ++ +
Sbjct: 608 VPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNA 655



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 194/402 (48%), Gaps = 8/402 (1%)

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           ++  A+ +  EM  RG  PN+  ++ +I  LC  G V  S G+LG M      P+  S+ 
Sbjct: 206 EVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYN 265

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            L+KG+ L G+  +A +L++ M   G  P +V Y+ L++ LC  G M EA  +  +M + 
Sbjct: 266 ILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQA 325

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM---VKVLCQNNMF 356
               N  T++ LIDG+AKAG +  A+     M + G  P+   +  +        +  +F
Sbjct: 326 GVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALF 385

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
                 + +M       + +  +  I  LC  GR+D A +LL    +     +++ +N L
Sbjct: 386 VLDQQQLHEMFGSQLSTDGI--DMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNAL 443

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +    +    +EAFEL   + K G+  +  T N ++ G+C  G + +A   L  M+  G 
Sbjct: 444 IAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRMGY 503

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
            + A +F I + +  + G V  A++  D ++  G   PD +++++ + G+C    + EA+
Sbjct: 504 CVIA-SFTIYLDSSFRAGDVLGALKCWDDMKIVG-LQPDFVAFSAYVNGLCRLDFLDEAY 561

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
               +M+  G+ PN  T+N L+ S F   G++     L+  M
Sbjct: 562 NGFIEMIRRGLVPNNFTYNSLI-SAFCRAGNVSEALKLEQKM 602



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 146/302 (48%), Gaps = 11/302 (3%)

Query: 264 EGFLPNVVAYST---LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           EGF      Y+     +H   + G  DEA+ V  ++      P+++  +AL+    + G 
Sbjct: 147 EGFRGRSGRYAARRLALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGE 206

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A +++  M + G  PN+  +  M+  LC   +   +  L+  M   +  P+  ++N 
Sbjct: 207 VRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNI 266

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            +KG C  G+ + A  L D+M+   C P I TYN L++ L R  R+ EA  L  E+ + G
Sbjct: 267 LMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAG 326

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +++N +T+N ++ G  +AG +  A     +M   G   D  TFNI+     K GK   A+
Sbjct: 327 VEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKA--AL 384

Query: 501 QLLDRIR----GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
            +LD+ +     G + + D I    L+  +C  G + +A+  L   + +G+  + + +N 
Sbjct: 385 FVLDQQQLHEMFGSQLSTDGIDM--LICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNA 442

Query: 557 LV 558
           L+
Sbjct: 443 LI 444


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/550 (25%), Positives = 271/550 (49%), Gaps = 8/550 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREF-GLKPTVKIYNHILDAL 75
           +L +MK  GV C+   + + I +  R G  E+AL++   I E  G+ P V  YN  ++A 
Sbjct: 132 ILDEMKEGGVVCAHS-YTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEAC 190

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
            + +++ +   +   M    + P+  +YN  +KA  +  + +    LL EM + G  PDA
Sbjct: 191 GSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDA 250

Query: 136 VSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCE 190
           ++Y ++++   K GQ +EA     E++ +  +  ++ YN  I    +  + +EA  +L +
Sbjct: 251 ITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQ 310

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M  +G+ P+VI+Y   I +    G  ETS+ +L +M  RG  PN   F S +     GG+
Sbjct: 311 MESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQ 370

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             +A +L   +   G  P+  ++++ I     +G   EA+ +  +M      P+  +Y++
Sbjct: 371 WEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNS 430

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
            I+   K G    A ++  +M + G +PNV++    ++   +   + +   L+ +M  + 
Sbjct: 431 AIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG 490

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN +T+N+ IK     G+ + A+ LL +MK+    P+  TYN  +    +  R KEA 
Sbjct: 491 LTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAV 550

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L+ E+   G+  ++++Y   +    + G    A +LL +M  +G   + IT+N +I A 
Sbjct: 551 ALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKAC 610

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            + G+   A+ LL  ++      PD++SY   +      G  +EA   L++M  EG+ P+
Sbjct: 611 GRGGEWEKALDLLKELKETAV-APDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPD 669

Query: 551 FATWNVLVRS 560
             ++   +R+
Sbjct: 670 VISYTSAIRA 679



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 243/507 (47%), Gaps = 5/507 (0%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           I+  G   + + V  LL++M   G++     + SVI    + G  ++AL +   +   GL
Sbjct: 222 IKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGL 281

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P    YN  + A     R+     +   M+  G+ P+V +Y+  +KA     + + +  
Sbjct: 282 TPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVD 341

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLC 176
           LL EM  +G AP+ + + + + +  K GQ E+A EL     A+      + +N+ I    
Sbjct: 342 LLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACT 401

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  + +EA  LL EM  + + P+ I+Y++ I +    G  E +L +  QM  +G  PN+ 
Sbjct: 402 KSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVI 461

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S    ++     GR  E  +L  +M  +G  PNV+ Y++ I      G  ++A+ +  +M
Sbjct: 462 SSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKM 521

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +E +  P+  TY++ I   +K G    A  +   M   G +P+V++YT  +    +N  +
Sbjct: 522 KELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQW 581

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L+ +M  +   PN +T+N+ IK     G  + A+ LL ++K+    P++ +YN  
Sbjct: 582 ERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLA 641

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +    +  R +EA +L+ E+   G+  ++++Y + +      G   +A  LL  M   G 
Sbjct: 642 ISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGV 701

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLL 503
              A ++++ I A  K G+   A+ L+
Sbjct: 702 SPTATSYSLAIEACGKGGRREEAVCLV 728



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/552 (24%), Positives = 255/552 (46%), Gaps = 8/552 (1%)

Query: 2   IEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           IE  G   + +    LL++M    V   E  + S I +  R G  E+ + +   +   GL
Sbjct: 187 IEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGL 246

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
            P    YN ++     E ++     + + M   G+ P   +YN+ ++A  ++ R   A +
Sbjct: 247 TPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVE 306

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNALINGLC 176
           +L +M ++G  PD +SY   + +    GQ E + +L     G GV+     +N+ I    
Sbjct: 307 VLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACG 366

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K  + E+A  LL E+   G+ P+  ++++ I++    G  + +L +L +M  +   P+  
Sbjct: 367 KGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAI 426

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           S+ S ++    GG+   A +L  +M  +G  PNV++ +  I      G   E + +  QM
Sbjct: 427 SYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQM 486

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
                 PNV TY++ I    K G    A  +  +M     +P+ + Y   +    +   +
Sbjct: 487 PAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRW 546

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A +L+ +M  +   P+ +++   I      G+ + A++LL QM      PN+ TYN +
Sbjct: 547 KEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSV 606

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           +    R    ++A +L+ E+++  +  ++++YN  +    + G   EA  LL +M  EG 
Sbjct: 607 IKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGL 666

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEA 535
             D I++   I A   +G+   A+ LL+ + G    +P   SY SL    C  GG  +EA
Sbjct: 667 TPDVISYTSAIRACNAEGEWEKALGLLN-LMGAHGVSPTATSY-SLAIEACGKGGRREEA 724

Query: 536 FIYLQKMLNEGI 547
              +++M   G+
Sbjct: 725 VCLVREMAQRGL 736



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 200/436 (45%), Gaps = 7/436 (1%)

Query: 135 AVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV--YNALINGLCKEHKIEEAFWLL 188
           A SYTT +++  + GQ E+A    RE+  + G   +V  YN+ I       + E A  LL
Sbjct: 144 AHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLL 203

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM DR + P+ I+Y++ I +    G  E  +G+L +M   G  P+  ++ S++ G    
Sbjct: 204 REMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKE 263

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G+  EA  +   M  +G  P  ++Y+  I     +G   EAV V  QME     P+V +Y
Sbjct: 264 GQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISY 323

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
            A I      G    +  + + M   G +PN + +   +    +   + +A  L+ ++  
Sbjct: 324 DAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTA 383

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+  +FN+ I      GR   A++LL +M      P+  +YN  ++   +  + + 
Sbjct: 384 LGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEM 443

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A EL  ++   G+  N+++ N  +      G   E  +LL +M  +G   + IT+N  I 
Sbjct: 444 ALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIK 503

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
              K G+   A+ LL +++      PD I+Y S +      G  +EA   L++M  +G+ 
Sbjct: 504 TCGKGGQWEKALDLLAKMKELAM-TPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLT 562

Query: 549 PNFATWNVLVRSLFSN 564
           P+  ++   + +   N
Sbjct: 563 PDVISYTAAIDAYGKN 578



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 5/201 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M  +G++     + + I++Y + G  E+A+++  ++   GL P V  YN ++ A  
Sbjct: 552 LLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACG 611

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               +     +   +K   + P++ +YN+ + A  K  R + A  LL EM  +G  PD +
Sbjct: 612 RGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVI 671

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           SYT+ + +    G+ E+A  L    G+ GVS     Y+  I    K  + EEA  L+ EM
Sbjct: 672 SYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREM 731

Query: 192 VDRGIDPNVITYSTIISSLCD 212
             RG+    I+ S I+ +L D
Sbjct: 732 AQRGLSHRNISNSLIVEALGD 752


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 230/464 (49%), Gaps = 30/464 (6%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E A  +F+ +      P++  +  +L A     R+  +      M+  G+  +++++ IL
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +   C+ +R+  A  +L +M   G  P  V+                       FGS   
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVT-----------------------FGS--- 146

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
               L++G C  ++I +AF L+  MV  G +PNV+ Y+T+I  LC  G +  +L +L +M
Sbjct: 147 ----LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             +G   ++ ++ +LL G    GR  +A+ +   M++    P+VV ++ LI      G++
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL 262

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           DEA  +  +M ++S  PN  TY+++I+G    G L  A + ++ M S GC PNVV Y  +
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C+  M  +   L ++M+ E    +  T+NT I G C  G++  A+ +   M     
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I T+  LL GL     ++ A     ++ +    + IV YN ++HG+C+A  V +A++
Sbjct: 383 TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWE 442

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           L  ++ +EG K DA T+ I+I   CK G    A +L+ R++  G
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 223/438 (50%), Gaps = 6/438 (1%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVYN-- 169
           R + A+ L  EM +    P  V +T ++++   L + E     + +   +G    +Y+  
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            LI+  C+  ++  A  +L +M+  G +P+++T+ +++   C V  +  +  ++  M   
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN+  + +L+ G    G  + A +L N M ++G   +VV Y+TL+ GLC +G   +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +   M + S  P+V T++ALID F K GNL  A +++  MI +   PN V Y  ++  
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC +   + A    + MA + C PN VT+NT I G C    VD  MKL  +M       +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TYN L+ G  +V +++ A ++   +    +  +I+T+  +LHG+C  G +  A     
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M      +  + +NI+I+  CK  KV  A +L  R+   G   PD  +YT ++ G+C +
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG-VKPDARTYTIMILGLCKN 469

Query: 530 GGMQEAFIYLQKMLNEGI 547
           G  +EA   +++M  EGI
Sbjct: 470 GPRREADELIRRMKEEGI 487



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 195/391 (49%), Gaps = 1/391 (0%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L  G     + E+AF L  EMV     P+++ ++ ++++  ++   ET +    +M + G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            + +++SFT L+  +    R   A  +  +M++ G+ P++V + +L+HG C    + +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S+   M ++   PNV  Y+ LIDG  K G L  A ++ N M   G   +VV Y  ++  L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C +  +  A  ++  M   +  P+ VTF   I      G +D A +L  +M Q    PN 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN +++GL    R+ +A +    +   G   N+VTYNT++ G C+  MV E  +L  +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M  EG   D  T+N +I+ YC+ GK+  A+ +   +       PDII++  LL G+C +G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV-SRRVTPDIITHCILLHGLCVNG 400

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            ++ A +    M           +N+++  L
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGL 431



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 5/397 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + V Y  Q+M++ G+S     F  +I+ + R      AL +  ++ + G +P++  +  +
Sbjct: 88  ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSL 147

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L      NR      +   M + G EPNV  YN L+  LCKN  ++ A +LL EM  KG 
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207

Query: 132 APDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFW 186
             D V+Y T+++ +C  G+  +A    R++  R     V  + ALI+   K+  ++EA  
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  EM+   +DPN +TY++II+ LC  G +  +      M  +GC PN+ ++ +L+ G+ 
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                 E   L+ RM  EGF  ++  Y+TLIHG C  G +  A+ +   M      P++ 
Sbjct: 328 KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T+  L+ G    G +  A   ++ M  +     +VAY  M+  LC+ +   +A  L  ++
Sbjct: 388 THCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             E   P+  T+   I GLC  G    A +L+ +MK+
Sbjct: 448 PVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 7/373 (1%)

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +R S    +   M + G EP++ T+  LL   C  NR+  A+ L++ M   G  P+ V Y
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179

Query: 139 TTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T++  +CK G++  A EL         G+ V  YN L+ GLC   +  +A  +L +M+ 
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I+P+V+T++ +I      GN++ +  +  +M     +PN  ++ S++ G  + GR ++
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A   ++ M  +G  PNVV Y+TLI G C    +DE + +  +M       ++ TY+ LI 
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G+ + G L  A  I+  M+S   +P+++ +  ++  LC N     A    + M       
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
             V +N  I GLC   +V+ A +L  ++      P+  TY  ++ GL +    +EA EL+
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479

Query: 434 TEIEKCGI--QLN 444
             +++ GI  Q+N
Sbjct: 480 RRMKEEGIICQMN 492



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 148/303 (48%), Gaps = 5/303 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  E++    LL +M+ +G+      + +++      G    A +M   + +  
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +  ++D  + +        +Y  M +  ++PN  TYN ++  LC + R+  A 
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           K    M +KGC P+ V+Y T++S  CK   V+E  +L  R     F + +  YN LI+G 
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  + C MV R + P++IT+  ++  LC  G +E++L     M        I
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G     +  +A +L+ R+  EG  P+   Y+ +I GLC NG   EA  +  +
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481

Query: 296 MEE 298
           M+E
Sbjct: 482 MKE 484



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G L   R ++AF L  E+       +IV +  +L                 KM + 
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D  +F I+I+ +C+  +++ A+ +L ++   G + P I+++ SLL G C    + +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGD 159

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           AF  +  M+  G  PN   +N L+  L  N
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKN 189


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/600 (25%), Positives = 279/600 (46%), Gaps = 75/600 (12%)

Query: 34  ISVINSYRRVGLAEQALKMFYRIREF--GLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            S++ +   +GL E A+  F  +R+      P +  YN +    L E+R   +  +Y +M
Sbjct: 85  FSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDM 144

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA---------------- 135
               ++P  +T+N+L+ ALC+   ++ A ++  +M  KGC P+                 
Sbjct: 145 AVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLH 204

Query: 136 -------------------VSYTTIVSSICKLGQVEEARELA--MR---FGSGVSVYNAL 171
                              V+Y T++SS+C  GQ  EA +L   MR       +  +N  
Sbjct: 205 SHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCR 264

Query: 172 INGLCKEHKIEEAFWLLCEM-VDRGI---DPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           I  LCK  +I EA  +  +M +D  +    PN +TY+ ++   C  G  E +  I   M 
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM- 323

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
                 ++ S+   + G +  G+  EA  + N M  +   PN+ +Y+ L+HGLC  G   
Sbjct: 324 KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC-- 345
           +A S+   M E+   P+  TYS L+ G+ + G +L A+ +   MI  GC PN+  YTC  
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM--YTCNI 441

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM---- 401
           ++  L +     +A  L++ M       + VT NT I GLC  G +D A++++  M    
Sbjct: 442 LLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501

Query: 402 -------------------KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
                                 +CLP+  TY  ++ GL +V RV EA + + E+    + 
Sbjct: 502 SASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            + + ++T ++  C+ G +  AF++L +M  +G      T+N +I     + ++     L
Sbjct: 562 PDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGL 621

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +D ++  G + P++ +Y +++  +   G +++A   L +ML +GI PN  T+ +L+ + F
Sbjct: 622 MDEMKERGIF-PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFF 680



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 265/558 (47%), Gaps = 39/558 (6%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R+F       +   + D  L EN  S    +      D   P +  YN+L +   K +RV
Sbjct: 77  RDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHD--PPPISFYNLLFRCSLKESRV 134

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----L 171
           D    L  +M      P   ++  ++S++C++G +E ARE+  +        N      L
Sbjct: 135 DCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGIL 194

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + G C+         LL EM   G  PN + Y+T+ISSLC  G    +  ++ +M   G 
Sbjct: 195 VRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGL 254

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL----PNVVAYSTLIHGLCSNGSMD 287
           +P+I +F   +      G+  EAS ++  M  +  +    PN V Y+ ++ G CS G  +
Sbjct: 255 SPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFE 314

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA ++   M+ NS   ++ +Y+  + G  ++G LL A  I N M      PN+ +Y  +V
Sbjct: 315 EARAIFDSMK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILV 373

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+  MF  A S++  M      P+TVT++T + G C  G++  A  +L +M Q  C 
Sbjct: 374 HGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF 433

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T N LL  L +  R  EA +L+  + + G  L+ VT NT+++G+C+AG + +A ++
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEI 493

Query: 468 LGKMLIEGTK-----------------------LDAITFNIIIYAYCKQGKVNNA-IQLL 503
           +  M   G+                         D+IT+  II   CK G+V+ A  +LL
Sbjct: 494 VSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLL 553

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + I  G + +PD + + + ++  C  G +  AF  L++M  +G   +  T+N L++ L S
Sbjct: 554 EMI--GKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGS 611

Query: 564 NLGHLGPVYILDDIMANK 581
               +  +Y L D M  +
Sbjct: 612 E-NQIFEIYGLMDEMKER 628



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 259/535 (48%), Gaps = 31/535 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   ++  + +  +M  +G   +E     ++  Y R GL    + +   +R  G
Sbjct: 159 LISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG 218

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++ +L  E +      +   M+  G+ P++ T+N  + ALCK+ ++  A 
Sbjct: 219 ALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEAS 278

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV--YNALI 172
           ++  +M          P+ V+Y  ++   C  G  EEAR +  +M+    +S+  YN  +
Sbjct: 279 RIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWM 338

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            GL +  K+ EA  +L EM ++ I PN+ +Y+ ++  LC  G    +  ILG M   G  
Sbjct: 339 LGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  ++++LL GY   G+  EA+ +   MI+ G  PN+   + L+H L   G   EA  +
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI----WNR-----------------M 331
              M E     +  T + +I+G  KAGNL  A +I    W R                 +
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518

Query: 332 ISNG--CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            +NG  C P+ + Y  ++  LC+     +A   + +M  +   P+++ F+TFI   C  G
Sbjct: 519 RNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQG 578

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++  A ++L +M++  C  ++ TYN L+ GL   N++ E + L+ E+++ GI  N+ TYN
Sbjct: 579 KLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYN 638

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            I+  +   G + +A  LL +ML +G   +  TF I+I A+ K      A +L +
Sbjct: 639 NIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFE 693



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 228/511 (44%), Gaps = 70/511 (13%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSG---VSV 167
           ++D  ++LL+        P   S   +V ++  LG +E A    R L  RF      +S 
Sbjct: 64  QIDHLHQLLLSQHRDFAHPSGFS---LVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN L     KE +++   WL  +M    + P   T++ +IS+LC++G +E +  +  +M 
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +GC PN  S   L++GY   G      DL + M   G LPN VAY+T+I  LC  G   
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG----CSPNVVAY 343
           EA  +  +M E    P++ T++  I    K+G +L AS+I+  M  +       PN V Y
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTY 300

Query: 344 TCMVKVLCQNNMFH----------------------------------QAHSLIEKMAFE 369
             M++  C   MF                                   +AH ++ +MA +
Sbjct: 301 NLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           N  PN  ++N  + GLC  G    A  +L  M++    P+  TY+ LL G  R  ++ EA
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEA 420

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             ++ E+ + G   N+ T N +LH + + G   EA  LL  M   G  LD +T N +I  
Sbjct: 421 NYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480

Query: 490 YCKQGKVNNAIQ----------------------LLDRIRGGGEWNPDIISYTSLLWGIC 527
            CK G ++ AI+                      L D    G +  PD I+Y +++ G+C
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             G + EA   L +M+ + + P+   ++  +
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI 571



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 242/560 (43%), Gaps = 69/560 (12%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR---EFGL-KPTVKIYN 69
            + L+++M+  G+S     F   I +  + G   +A ++F  ++   E GL KP    YN
Sbjct: 242 AEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYN 301

Query: 70  HILDALLAENRFSMINPIYSNMK------------------RDG---------------- 95
            +L+   +E  F     I+ +MK                  R G                
Sbjct: 302 LMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKN 361

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           ++PN+++YNIL+  LCK      A  +L  M   G APD V+Y+T++   C+ G++ EA 
Sbjct: 362 IKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEAN 421

Query: 155 ---RELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
              RE+ ++ G   ++Y  N L++ L KE +  EA  LL  M +RG   + +T +T+I+ 
Sbjct: 422 YVLREM-IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480

Query: 210 LCDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLKGYL 246
           LC  GN++ ++ I+  M+ RG                       C P+  ++ +++ G  
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  EA      MI +   P+ + + T I+  C  G +  A  V  +ME+  C  ++ 
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLR 600

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY++LI G      +     + + M   G  PNV  Y  ++  L +      A  L+++M
Sbjct: 601 TYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEM 660

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   PN  TF   I           A +L  ++    C    + Y+ + + LL     
Sbjct: 661 LQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGET 719

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A EL        + L    Y  ++  +C+ G + +A  +L KM+ +    D  +F  +
Sbjct: 720 LKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPV 779

Query: 487 IYAYCKQGKVNNAIQLLDRI 506
           I    K+G  + A +  +R+
Sbjct: 780 IDELGKRGSKHAADEFAERM 799



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 39/274 (14%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           P+  TY  ++  LCK  RVD A K L+EM  K  +PD++ + T + + CK G++  A   
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 155 -RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            +E+  +     +  YN+LI GL  E++I E + L+ EM +RGI PNV TY+ IIS L +
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY--------------------------- 245
            G ++ +  +L +M  +G +PNI++F  L+  +                           
Sbjct: 647 GGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLY 706

Query: 246 -------LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                  L GG T +A +L+   +          Y  LI  LC +G +D+A  + ++M +
Sbjct: 707 SFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMD 766

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
                +  ++  +ID   K G+   A +   RM+
Sbjct: 767 KQYSFDPASFMPVIDELGKRGSKHAADEFAERMM 800


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 244/461 (52%), Gaps = 26/461 (5%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV---EEA 154
           P +F +  +  +L K N       L  +M  +G   D V+   +V+  C LGQV   ++ 
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 155 RE--------LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +E        +A  F      Y  LI+GLCK  +   A  +L  +    + PNV+ YSTI
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I SLC    V  +  +  QM ++  +P++ ++ +L+ G L+ GR  EA  L+N+M+ +  
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P++  ++ L+ GLC  G M +A +V   M + S  P+V TY++L+DG+        A+ 
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++N M   G +P+V +Y+ M+  LC+  M  +A +L+++M  ++  PNTVT+++ I GL 
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             GR+  A  L+++M       ++ TYN LLD L + ++V +A  L+T+I+  GIQ +I 
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
           TY  ++ G+C+ G + +A ++   +LI+G  LD++               + A+ LL ++
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSL--------------FDKALSLLSKM 411

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              G   P+ +++  L+  +  +    +A   L++M+  G+
Sbjct: 412 EDNG-CTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 212/446 (47%), Gaps = 67/446 (15%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL------LKALCKNNRV 116
           PT+  +  I  +L+  N F  +  +   M+  G++ ++   NIL      L  +C N++V
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNAL 171
                   ++  KG   + VSY T++  +CK G+   A ++      +     V +Y+ +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           I  LCK+  + +AF L  +M+ + I P+VITY+T++     VG ++ ++G+  QM ++  
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 232 NPNIHSF-----------------------------------TSLLKGYLLGGRTHEASD 256
            P+I++F                                    SL+ GY L  + ++A+ 
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           ++N M R G  P+V +YS +I+GLC    +DEAV++  +M   S  PN  TYS+LIDG  
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K+G +  A  + N M + G   +V+ Y  ++  LC+N+   +A +L+ K+  +   P+  
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365

Query: 377 TFNTFIKGLCGCGRV---------------------DWAMKLLDQMKQYECLPNITTYNE 415
           T+   + GLC  GR+                     D A+ LL +M+   C PN  T+  
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEI 425

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGI 441
           L+  L   +   +A EL+ E+   G+
Sbjct: 426 LIRALFENDMNDKAVELLREMIARGL 451



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 201/405 (49%), Gaps = 22/405 (5%)

Query: 5   LGEKCEIDGVQYLLQ---QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           LG+ C  D V+  L     +  +G   ++  + ++I+   + G    A+++   I    +
Sbjct: 56  LGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLV 115

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +P V +Y+ I+ +L  +        +YS M    + P+V TYN L+       R+  A  
Sbjct: 116 QPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVG 175

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-LAMRFGSGVS----VYNALINGLC 176
           L  +M  K   PD  ++  +V  +CK G++++AR  LA+     V      YN+L++G  
Sbjct: 176 LFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYF 235

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              +  +A ++   M  RG+ P+V +YS +I+ LC    V+ ++ +L +M  +   PN  
Sbjct: 236 LVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTV 295

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +++SL+ G    GR  +A DL N M   G   +V+ Y++L+  LC N  +D+A+++  ++
Sbjct: 296 TYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKI 355

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           ++    P++ TY+ L+DG  K G L  A +++  ++  G                 +++F
Sbjct: 356 KDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYH--------------LDSLF 401

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            +A SL+ KM    C PN VTF   I+ L      D A++LL +M
Sbjct: 402 DKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREM 446



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 185/373 (49%), Gaps = 7/373 (1%)

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL------LGGRT 251
           P +  +  I +SL  + +  T + +  QM +RG   ++ +   L+  +       L  + 
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            E     + +I +GF  N V+Y TLI GLC  G    A+ V   ++     PNV  YS +
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I    K   ++ A  ++++M+    SP+V+ Y  ++          +A  L  +M  +N 
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            P+  TFN  + GLC  G +  A  +L  M +    P++ TYN L+DG   V +  +A  
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +   + + G+  ++ +Y+ +++G+C+  MV EA  LL +M  +    + +T++ +I    
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K G++ +A  L++ +   G+   D+I+Y SLL  +C +  + +A   L K+ ++GI P+ 
Sbjct: 306 KSGRIFDAWDLVNEMHNRGQP-ADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDI 364

Query: 552 ATWNVLVRSLFSN 564
            T+ +LV  L  N
Sbjct: 365 YTYTILVDGLCKN 377



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 165/334 (49%), Gaps = 20/334 (5%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           +K  ID    L  QM ++ +S     + +++     VG  ++A+ +F ++    +KP + 
Sbjct: 132 DKLVIDAFD-LYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +N ++D L  E        + + M +  ++P+V TYN L+       + + A  +   M
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKI 181
             +G  PD  SY+ +++ +CK   V+EA  L     S         Y++LI+GL K  +I
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRI 310

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            +A+ L+ EM +RG   +VITY++++ +LC    V+ ++ +L ++  +G  P+I+++T L
Sbjct: 311 FDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTIL 370

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G    GR  +A +++  +              LI G   +   D+A+S+  +ME+N C
Sbjct: 371 VDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNGC 416

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
            PN  T+  LI    +      A ++   MI+ G
Sbjct: 417 TPNPVTFEILIRALFENDMNDKAVELLREMIARG 450



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 117/235 (49%), Gaps = 7/235 (2%)

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           N  +P +  +  +   L + N FH   SL  +M       + V  N  +   C  G+V  
Sbjct: 2   NNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCL 61

Query: 394 AMKLLDQMKQYECLP------NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
             K+ + +  ++ +       N  +Y  L+DGL +    + A +++  I+   +Q N+V 
Sbjct: 62  NDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVM 121

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           Y+TI++ +C+  +V++AF L  +ML++    D IT+N ++Y     G++  A+ L +++ 
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQML 181

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
                 PDI ++  L+ G+C  G M++A   L  M+ + + P+  T+N L+   F
Sbjct: 182 LKN-IKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYF 235


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 263/531 (49%), Gaps = 62/531 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSC--SEGVFISVINSYRRVGLAEQALKMFYRIR- 57
           ++ KLG+    + ++ +LQ+MK  G+ C    GV +  I+SY +  L E+ L +   +  
Sbjct: 93  ILRKLGKVGSFNSMKDILQEMK--GLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEV 150

Query: 58  EFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
           EFGL     +YN +L+ L+  N+  ++  ++S M   G++P+V T+NIL+KALCK +++ 
Sbjct: 151 EFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIR 210

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALI 172
            A  ++ EM + G  PD  ++TT++    + G ++ A   +E  +  G        N L+
Sbjct: 211 PAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLV 270

Query: 173 NGLCKEHKIEEAF----------------WLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +G CKE +IEEA                  L  EM ++G  P+  TY+ +I SLC  G +
Sbjct: 271 HGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKL 330

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +LG+L +M + GC  N+ ++ +L+ G+    +  EA +++++M  +G   N V Y+TL
Sbjct: 331 QEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTL 390

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I GLC +  + EA  +  QM      P+  TY++++  F + G++  A+ I   M SNGC
Sbjct: 391 IDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGC 450

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++V Y                                    T I GLC  GRV+ A +
Sbjct: 451 EPDIVTY-----------------------------------GTLIGGLCKAGRVEVASR 475

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL  ++    +     YN ++  L +  R KEA  L  E+E+ G   +  TY  +  G+ 
Sbjct: 476 LLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLS 535

Query: 457 RAGMVV-EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            +G  + EA   + +M+ +G   +  +F ++    C     +  I+L+D +
Sbjct: 536 NSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLV 586



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 240/495 (48%), Gaps = 24/495 (4%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K+    PN   Y  +L+ L K    +    +L EM    C  D       + S  K    
Sbjct: 79  KQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELY 138

Query: 152 EE----ARELAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           EE       + + FG  +   +YN L+N L   +K++    +   MV +GI P+V T++ 
Sbjct: 139 EEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNI 198

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I +LC    +  ++ ++ +M   G  P+  +FT+L++G++  G    A  +  +M+  G
Sbjct: 199 LIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAG 258

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVS----------------VSYQMEENSCPPNVTTYS 309
                V  + L+HG C  G ++EA+S                +  +M+   C P+  TY+
Sbjct: 259 CPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYN 318

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LID     G L  A  +   M  +GC+ NV+ Y  ++   C+N    +A  + ++M  +
Sbjct: 319 MLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQ 378

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
               N+VT+NT I GLC   RV  A +L+DQM      P+  TYN +L    R   +++A
Sbjct: 379 GLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKA 438

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++V  +   G + +IVTY T++ G+C+AG V  A +LL  + ++G  L    +N +I A
Sbjct: 439 ADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQA 498

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGIC 548
             K+ +   A++L   +   G   PD  +Y  +  G+ NSGG + EA  ++ +M+ +G  
Sbjct: 499 LFKRKRTKEAMRLFREMEEKGN-TPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFL 557

Query: 549 PNFATWNVLVRSLFS 563
           P F+++ +L   L S
Sbjct: 558 PEFSSFYMLAEGLCS 572



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 25/302 (8%)

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK---AGNLL 322
           F PN   Y  ++  L   GS +    +  +M+   C  +       ID +AK      +L
Sbjct: 83  FRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEIL 142

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
              ++    +  G + + + Y  ++ VL   N      ++   M  +   P+  TFN  I
Sbjct: 143 CIVEVME--VEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILI 200

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           K LC   ++  A+ ++++M  Y  +P+  T+  L+ G +    +  AF +  ++   G  
Sbjct: 201 KALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCP 260

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           +  VT N ++HG C+ G + EA   + +M                     +GK   AI+L
Sbjct: 261 VTNVTVNVLVHGFCKEGRIEEALSFIDEM-------------------SNEGKHTMAIEL 301

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            + ++  G   PD  +Y  L+  +C  G +QEA   L++M   G   N  T+N L+    
Sbjct: 302 YNEMKNKG-CQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFC 360

Query: 563 SN 564
            N
Sbjct: 361 KN 362


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 257/503 (51%), Gaps = 10/503 (1%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  VF +++ +  ++G  E A ++  +++  G   TV  +N+ L  LL  N  +    +Y
Sbjct: 92  SPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMY 151

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
             M   G   NV T+N+++ AL K  R+  A  ++      G  P+ V++  I+    K+
Sbjct: 152 KEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKM 211

Query: 149 GQVEEARELA--MRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           G ++ A +L   M   SG SV      YN+ +NG CK   +  A     EM+ + I+PNV
Sbjct: 212 GAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNV 271

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            TY+T++     VG++E +  +  ++  +G  PN   + S++    + G    AS L + 
Sbjct: 272 RTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSD 331

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           MI +   P+   YS +I GLC NG ++EA      + E S   +  +++ +I+   ++ N
Sbjct: 332 MIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNN 391

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L GA Q+   M   G  P+VV +  ++   C++     A  + EKM      PN + +N+
Sbjct: 392 LAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNS 451

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G    G  D A+ L+D +++   L ++ TYN L+ G     ++ +AF L +E+   G
Sbjct: 452 VINGFAKEGSFDPAILLIDTLRRMG-LFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSG 510

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           I  + VTYNT+++ +C+AG V++A +L+  M++ G   D +T+ I+I ++ K+      I
Sbjct: 511 ILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVI 570

Query: 501 QLLDRIRGGGEWNPDIISYTSLL 523
           +L D +   G   PD  +Y +++
Sbjct: 571 ELHDYMVLKGVV-PDRQTYQTMV 592



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 220/443 (49%), Gaps = 18/443 (4%)

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
           C      +  +V +  ++G  E A E+  +     F   V  +N  ++ L K + +   +
Sbjct: 89  CKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFW 148

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +  EMV  G   NV T++ II +L   G +  ++ ++ +    G  PN+ +F  ++ G 
Sbjct: 149 KMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGA 208

Query: 246 LLGGRTHEASDLWNRMIRE-------GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
           +  G    A DL  +++R+          P+ V Y++ ++G C  G++  A     +M  
Sbjct: 209 IKMG----AMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLG 264

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               PNV TY+ L+DG+ + G+L  A ++ + ++  G  PN V Y  ++  L        
Sbjct: 265 KEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEG 324

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  L+  M  +   P+  T++  I+GLC  G ++ A K L  + +   + +  ++N +++
Sbjct: 325 ASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVIN 384

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            L R N +  A +L+  +   G+  ++VT+ T++   C+ G V  A Q+  KM+  G K 
Sbjct: 385 YLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKP 444

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
           + + +N +I  + K+G  + AI L+D +R  G +  D+++Y +L+ G CN G + +AF  
Sbjct: 445 NLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF--DVVTYNTLIHGYCNCGKIDQAFAL 502

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
             +M N GI  +  T+N L+ SL
Sbjct: 503 FSEMRNSGILASHVTYNTLINSL 525



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 235/472 (49%), Gaps = 12/472 (2%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           P VF  + L++   +    +GAY+++ ++   G      ++   +S + KL  V    ++
Sbjct: 93  PAVF--DALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKM 150

Query: 158 AMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                S      V+ +N +I  L KE ++ EA  ++   +  GI PNV+T++ II     
Sbjct: 151 YKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIK 210

Query: 213 VGNVETSLGILGQMFV-RGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           +G ++ +L ++ +M V  GC+  P+  ++ S + G+   G    A +    M+ +   PN
Sbjct: 211 MGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPN 270

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V  Y+TL+ G    GS++ A  +  ++ E    PN   Y+++I   +  G++ GAS + +
Sbjct: 271 VRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLS 330

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            MI     P+   Y+ +++ LC+N   ++A   ++ +   +   +  + N  I  LC   
Sbjct: 331 DMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSN 390

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A +LL  M     +P++ T+  L+D   +  +V+ A ++  ++ K G + N++ YN
Sbjct: 391 NLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYN 450

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           ++++G  + G    A  L+  +   G   D +T+N +I+ YC  GK++ A  L   +R  
Sbjct: 451 SVINGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNS 509

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           G     + +Y +L+  +C +G + +A   ++ M+  G+ P++ T+ +L+ S 
Sbjct: 510 GILASHV-TYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSF 560



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 199/425 (46%), Gaps = 10/425 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG---LKPTVKI 67
           ++ V  + + +K  G+  +   F  +I+   ++G  + ALK+  ++       +KP    
Sbjct: 180 VEAVSVIYRSLKT-GIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVT 238

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           YN  ++        ++       M    +EPNV TY  L+    +   ++ A++L  E+ 
Sbjct: 239 YNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELV 298

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
            KG  P++V Y +I+  +   G +E A  L       R       Y+ +I GLC+   + 
Sbjct: 299 EKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLN 358

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EAF  L  +++  +  +  +++ +I+ LC   N+  +  +L  M+VRG  P++ +F +L+
Sbjct: 359 EAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLI 418

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
             +   G+   A  ++ +MI+ G  PN++ Y+++I+G    GS D A+ +   +      
Sbjct: 419 DRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF 478

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +V TY+ LI G+   G +  A  +++ M ++G   + V Y  ++  LC+     QA  L
Sbjct: 479 -DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKEL 537

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
           ++ M      P+ VT+   I         +  ++L D M     +P+  TY  ++  LL+
Sbjct: 538 MKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQ 597

Query: 423 VNRVK 427
              V+
Sbjct: 598 EESVE 602



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 4/291 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  + +++G   LL  M  + +   +  +  VI    R G   +A K    I E  
Sbjct: 312 IIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMS 371

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      +N +++ L   N  +    + +NM   G+ P+V T+  L+   CK+ +V+ A 
Sbjct: 372 LVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAI 431

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---MRFG-SGVSVYNALINGLC 176
           ++  +M   G  P+ + Y ++++   K G  + A  L     R G   V  YN LI+G C
Sbjct: 432 QVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYC 491

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
              KI++AF L  EM + GI  + +TY+T+I+SLC  G+V  +  ++  M +RG  P+  
Sbjct: 492 NCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYV 551

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           ++T L+  +       E  +L + M+ +G +P+   Y T++  L    S++
Sbjct: 552 TYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 6/214 (2%)

Query: 13  GVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           G + LL  M V G+      F ++I+ + + G  E A++++ ++ + G KP + IYN ++
Sbjct: 394 GAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVI 453

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           +    E  F     +   ++R G+  +V TYN L+   C   ++D A+ L  EM N G  
Sbjct: 454 NGFAKEGSFDPAILLIDTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGIL 512

Query: 133 PDAVSYTTIVSSICKLGQVEEAREL-AMRFGSGV----SVYNALINGLCKEHKIEEAFWL 187
              V+Y T+++S+CK G V +A+EL  M    G+      Y  LI    K+   EE   L
Sbjct: 513 ASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              MV +G+ P+  TY T++  L    +VE   G
Sbjct: 573 HDYMVLKGVVPDRQTYQTMVIPLLQEESVEFDYG 606



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 129/279 (46%), Gaps = 11/279 (3%)

Query: 313 DGFAKAGNLLGAS-----QIWNRMIS--NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
           D     GNL+  +     ++ + +IS  + C  +   +  +V+   Q      A+ +I K
Sbjct: 59  DALFIMGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITK 118

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           +  +        +N F+  L     V+   K+  +M  Y  + N+ T+N ++  L +  R
Sbjct: 119 LQLDGFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGR 178

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG---TKLDAIT 482
           + EA  ++    K GI  N+VT+N I+ G  + G +  A +L+ KM +      K D++T
Sbjct: 179 LVEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVT 238

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           +N  +  +CK G +  A +    + G  E  P++ +Y +L+ G    G ++ AF    ++
Sbjct: 239 YNSFVNGFCKIGNLAVAEEFKKEMLGK-EIEPNVRTYATLVDGYTRVGSLENAFRLCDEL 297

Query: 543 LNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + +G+ PN   +N ++  L       G   +L D++  +
Sbjct: 298 VEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKR 336


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 232/492 (47%), Gaps = 28/492 (5%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+A + F ++R+F + P  +  N +L  L    R  +    + +M   G++ +VFTYNI+
Sbjct: 3   EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-- 164
           +  LCK   ++ A  L  +M   G  PD V+Y +++    KLG ++E   +  +      
Sbjct: 63  IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 122

Query: 165 ---VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
              V  YNALIN  CK  ++ +AF  L EM   G+ PNV+TYST I + C  G ++ ++ 
Sbjct: 123 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIK 182

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
               M      PN  ++TSL+      G   EA  L   +++ G   NVV Y+ L+ GLC
Sbjct: 183 FFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLC 242

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G M EA  V   M      PN  TY+AL+ GF KA  +  A  I   M      P+++
Sbjct: 243 EEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 302

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF-------------------- 381
            Y  ++  LC  +   +A  LI ++       N V + T                     
Sbjct: 303 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 362

Query: 382 ---IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              + GLC     + A KL D+M     +P+   Y  L+DG ++   ++EA  L   + +
Sbjct: 363 LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 422

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G++L++  Y  ++ G+  +G V +A  LL +M+ +G   D + +  +I  Y   GKV+ 
Sbjct: 423 IGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDE 482

Query: 499 AIQLLDRIRGGG 510
           A++L + +   G
Sbjct: 483 ALELQNEMAKRG 494



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 232/478 (48%), Gaps = 32/478 (6%)

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWL 187
           P   S   ++  + K+G+ + +R+     G+      V  YN +I+ LCKE  +E A  L
Sbjct: 19  PKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSL 78

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             +M + G  P+++TY+++I     +G ++  + I  QM    C+P++ ++ +L+  +  
Sbjct: 79  FTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK 138

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
             R  +A +  + M   G  PNVV YST I   C  G + EA+     M   +  PN  T
Sbjct: 139 FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFT 198

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y++LID   KAGNL  A ++   ++  G   NVV YT ++  LC+     +A  +   M 
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                PN  T+   + G      +++A  +L +MK+    P++  Y  +L GL   +R++
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 318

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL------------------- 468
           EA  L+ EI++ GI  N V Y T++    ++G   EA  LL                   
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVA 378

Query: 469 ----GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLL 523
                +ML +G   D I +  +I    K G +  A+ L DR I  G E   D+ +YT+L+
Sbjct: 379 KKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL--DLHAYTALI 436

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           WG+ +SG +Q+A   L +M+ +G+ P+   +  L++  ++ LG +     L + MA +
Sbjct: 437 WGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA-LGKVDEALELQNEMAKR 493



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 217/463 (46%), Gaps = 38/463 (8%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D  +   + M   G+  S   +  +I+   + G  E A  +F +++E G  P +  YN +
Sbjct: 38  DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSL 97

Query: 72  LDALLAENRFSMINP---IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           +D      +  +++    I+  MK    +P+V TYN L+   CK  R+  A++ L EM  
Sbjct: 98  IDG---HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKA 154

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKI 181
            G  P+ V+Y+T + + CK G ++EA       R +A+        Y +LI+  CK   +
Sbjct: 155 NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALT--PNEFTYTSLIDANCKAGNL 212

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSL 241
            EA  L+ E++  GI  NV+TY+ ++  LC+ G ++ +  +   M   G  PN  ++T+L
Sbjct: 213 AEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTAL 272

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           + G++       A D+   M  +   P+++ Y T++ GLC+   ++EA  +  +++E+  
Sbjct: 273 VHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGI 332

Query: 302 PPNVTTYSALIDGFAKAGNLLGA-----------------------SQIWNRMISNGCSP 338
             N   Y+ L+D + K+G    A                        ++++ M+  G  P
Sbjct: 333 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMP 392

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           + +AYT ++    ++    +A +L ++M       +   +   I GL   G+V  A  LL
Sbjct: 393 DKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLL 452

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           D+M     LP+   Y  L+     + +V EA EL  E+ K G+
Sbjct: 453 DEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 211/431 (48%), Gaps = 28/431 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ L ++ +++  + L  QMK  G +     + S+I+ + ++GL ++ + +F ++++  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +++      R          MK +G++PNV TY+  + A CK   +  A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA---MRFGSGVSV--YNALINGL 175
           K  V+M      P+  +YT+++ + CK G + EA +L    ++ G  ++V  Y AL++GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+E +++EA  +   M++ G+ PN  TY+ ++        +E +  IL +M  +   P++
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST-------------------- 275
             + ++L G     R  EA  L   +   G   N V Y+T                    
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 361

Query: 276 ---LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
              L+ GLC N   + A  +  +M +    P+   Y+ALIDG  K GNL  A  + +RMI
Sbjct: 362 MLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI 421

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G   ++ AYT ++  L  +    +A +L+++M  +   P+ V +   IK     G+VD
Sbjct: 422 EIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVD 481

Query: 393 WAMKLLDQMKQ 403
            A++L ++M +
Sbjct: 482 EALELQNEMAK 492



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 180/372 (48%), Gaps = 3/372 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           +EEA     +M    + P   + + ++  L  VG  + S      M   G   ++ ++  
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++      G    A  L+ +M   GF P++V Y++LI G    G +DE + +  QM++  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           C P+V TY+ALI+ F K   +  A +  + M +NG  PNVV Y+  +   C+  M  +A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
                M      PN  T+ + I   C  G +  A+KL++++ Q     N+ TY  LLDGL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
               R+KEA E+   +   G+  N  TY  ++HG  +A  +  A  +L +M  +  K D 
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           + +  I++  C + ++  A  L+  I+  G  N + + YT+L+     SG   EA   L+
Sbjct: 302 LLYGTILWGLCNESRLEEAKLLIGEIKESG-INTNAVIYTTLMDAYFKSGQATEALTLLE 360

Query: 541 KMLN--EGICPN 550
           +ML+  +G+C N
Sbjct: 361 EMLDLVDGLCKN 372



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 130/326 (39%), Gaps = 64/326 (19%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + +++ +   +V  ++ +E  + S+I++  + G   +ALK+   I + G+K  V  Y  +
Sbjct: 179 EAIKFFVDMRRV-ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           LD L  E R      ++  M   G+ PN  TY  L+    K   ++ A  +L EM  K  
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 132 APD-----------------------------------AVSYTTIVSSICKLGQVEEARE 156
            PD                                   AV YTT++ +  K GQ  EA  
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 157 LAMRFGSGVS----------------------------VYNALINGLCKEHKIEEAFWLL 188
           L       V                              Y ALI+G  K   ++EA  L 
Sbjct: 358 LLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLR 417

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M++ G++ ++  Y+ +I  L   G V+ +  +L +M  +G  P+   +  L+K Y   
Sbjct: 418 DRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL 477

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYS 274
           G+  EA +L N M + G +  +  ++
Sbjct: 478 GKVDEALELQNEMAKRGMITGLSDHA 503


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/548 (25%), Positives = 277/548 (50%), Gaps = 7/548 (1%)

Query: 17  LLQQMKVE-GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL++M+ + GV  S+  + SVI ++ + G  E+A+++   +  FG+  +V     +++  
Sbjct: 296 LLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGY 355

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              N       +++ M+ +G+ P+   ++++++  CKN  ++ A +  + M +   AP +
Sbjct: 356 CKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSS 415

Query: 136 VSYTTIVSSICKLGQVEEAREL-AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEM 191
           V   T++    K    E A E+    F S ++   + N +    CK+ K++ A   L  M
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMM 475

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             +GI+PNV+ Y+ ++ + C + N++ +  I  +M  +G  PN  +++ L+ G+      
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSA 310
             A D+ N+M    F  N V Y+T+I+GLC  G   +A  +   + +E     + T+Y++
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G+   A + +  M  NG SPNVV +T ++   C++N    A  +  +M    
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSME 655

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              +   +   I G C    +  A  L  ++ +   +PN++ YN L+ G   + ++  A 
Sbjct: 656 LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  ++   GI  ++ TY T++ G+ + G +  A  L  ++L  G   D I   +++   
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGL 775

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K+G+   A ++L+ ++   +  P+++ Y++++ G    G + EAF    +ML +GI  +
Sbjct: 776 SKKGQFLKASKMLEEMK-KKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834

Query: 551 FATWNVLV 558
              +N+LV
Sbjct: 835 DTVFNLLV 842



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 142/592 (23%), Positives = 261/592 (44%), Gaps = 42/592 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L+   K  G   +   F  ++N+Y R    + A+  F  + +  + P V   N++L 
Sbjct: 153 VNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS 212

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           +L+  N       IY+ M   G+  +  T  +L++A  +  + + A K+   + ++G  P
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272

Query: 134 DAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVS--VYNALINGLCKEHKIEEAFWL 187
           D + ++  V + CK   +  A    RE+  + G   S   Y ++I    KE  +EEA  +
Sbjct: 273 DGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRV 332

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
           + EMV  GI  +VI  +++++  C    +  +L +  +M   G  P+   F+ +++ +  
Sbjct: 333 MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCK 392

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHG---------------------------- 279
                +A + + RM      P+ V   T+I G                            
Sbjct: 393 NMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC 452

Query: 280 ------LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
                  C  G +D A S    ME+    PNV  Y+ ++    +  N+  A  I++ M+ 
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLE 512

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  PN   Y+ ++    +N     A  +I +M   N   N V +NT I GLC  G+   
Sbjct: 513 KGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK 572

Query: 394 AMKLLDQM-KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           A ++L  + K+     + T+YN ++DG ++V     A E   E+ + G   N+VT+ +++
Sbjct: 573 AKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI 632

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G C++  +  A ++  +M     KLD   +  +I  +CK+  +  A  L   +   G  
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG-L 691

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            P++  Y SL+ G  N G M  A    +KM+N+GI  +  T+  ++  L  +
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/532 (24%), Positives = 252/532 (47%), Gaps = 21/532 (3%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           + FG + T + +N++L+A +   R       +  M    + P V   N +L +L ++N +
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLI 220

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNAL 171
           D A ++  +M   G A D V+   ++ +  +  + EEA ++  R  S  +     +++  
Sbjct: 221 DEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLA 280

Query: 172 INGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +   CK   +  A  LL EM  + G+  +  TY+++I +    GN+E ++ ++ +M   G
Sbjct: 281 VQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFG 340

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
              ++ + TSL+ GY  G    +A DL+NRM  EG  P+ V +S ++   C N  M++A+
Sbjct: 341 IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAI 400

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
               +M+     P+      +I G  KA +   A +I+N    +  +   +     + + 
Sbjct: 401 EFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL-LF 459

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C+      A S ++ M  +   PN V +N  +   C    +D A  +  +M +    PN 
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY+ L+DG  +    + A++++ ++     + N V YNTI++G+C+ G   +A ++L  
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579

Query: 471 MLIEGT-KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           ++ E    +   ++N II  + K G  ++A++    +   G+ +P+++++TSL+ G C S
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK-SPNVVTFTSLINGFCKS 638

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVR------------SLFSNLGHLG 569
             M  A     +M +  +  +   +  L+             +LFS L  LG
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 226/478 (47%), Gaps = 40/478 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPT------------ 64
           L  +M+ EG++  + +F  ++  + +    E+A++ + R++   + P+            
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426

Query: 65  --------VKIYNHILDALLA--------------ENRFSMINPIYSNMKRDGMEPNVFT 102
                   ++I+N   ++ +A              + +          M++ G+EPNV  
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL----- 157
           YN ++ A C+   +D A  +  EM  KG  P+  +Y+ ++    K    + A ++     
Sbjct: 487 YNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMN 546

Query: 158 AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV-DRGIDPNVITYSTIISSLCDVGNV 216
           A  F +   +YN +INGLCK  +  +A  +L  ++ ++    +  +Y++II     VG+ 
Sbjct: 547 ASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDT 606

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           ++++    +M   G +PN+ +FTSL+ G+    R   A ++ + M       ++ AY  L
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I G C    M  A ++  ++ E    PNV+ Y++LI GF   G +  A  ++ +M+++G 
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
           S ++  YT M+  L ++   + A  L  ++      P+ +     + GL   G+   A K
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +L++MK+ +  PN+  Y+ ++ G  R   + EAF L  E+ + GI  +   +N ++ G
Sbjct: 787 MLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 220/408 (53%), Gaps = 15/408 (3%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N ++  L K        +L  +M  RGI PN++  + +I+S C +G++ ++  +L ++ 
Sbjct: 65  FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKIL 124

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHE----------ASDLWNRMIREGFLPNVVAYSTLI 277
             G  PN  +  +L+KG  L G+ H+          A DL+N+MI E   P+V  ++ L+
Sbjct: 125 KMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILV 184

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
            G C  G + EA +V   M      P V TY++L+DG+     +  A  I+N M   G S
Sbjct: 185 DGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS 244

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P++ +Y+ ++   C+  M  +A  L+++M  +   PN VT+++ I GLC  G++ +A+KL
Sbjct: 245 PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL 304

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
           +D+M      PNI TY+ +LD L + ++V  A  L+T+++  GIQ N+ TY  ++ G+C+
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQ 364

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           +G + +A ++   +L++G  L+  T+ ++I  +C +G  + A+ LL ++   G   P+  
Sbjct: 365 SGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG-CIPNAK 423

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           +Y  ++  +      + A    +K+L E I  NF     L   L +++
Sbjct: 424 TYEIIILSLFKKDENEMA----EKLLCEMIETNFDGRVALTNDLIASI 467



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 215/442 (48%), Gaps = 15/442 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           + S   ++      + A+ +F R+ +    P    +N IL +L+    +  +  +   M+
Sbjct: 30  YFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKME 89

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G++PN+   NIL+ + C+   +  A+ +L ++   G  P+ ++  T++  +C  G++ 
Sbjct: 90  FRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIH 149

Query: 153 EARELAMRFGSGVSVYNA---------------LINGLCKEHKIEEAFWLLCEMVDRGID 197
           +   +  +    V ++N                L++G CKE +++EA  +L  M+ +GI 
Sbjct: 150 DKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIK 209

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P V+TY++++     V  V  +  I   M   G +P+I S++ L+ G+       EA +L
Sbjct: 210 PGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL 269

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              M  +  +PNVV YS+LI GLC +G +  A+ +  +M +   PPN+ TYS+++D   K
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
              +  A  +  +M + G  PN+  YT ++K LCQ+     A  + E +  +    N  T
Sbjct: 330 NHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYT 389

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +   I+G C  G  D A+ LL +M+   C+PN  TY  ++  L + +  + A +L+ E+ 
Sbjct: 390 YTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMI 449

Query: 438 KCGIQLNIVTYNTILHGVCRAG 459
           +      +   N ++  +   G
Sbjct: 450 ETNFDGRVALTNDLIASIWVTG 471



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 185/409 (45%), Gaps = 46/409 (11%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N I Y +  ++  +  +V+ ++ +  ++  +   P    F  +L   +     H    L 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK- 317
            +M   G  PN+V  + LI+  C  G +  A SV  ++ +    PN  T + LI G    
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 318 ---------AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
                     G L  A  ++N+MI    +P+V  +T +V   C+     +A +++  M  
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 369 ENCPPNTVTFNT-----------------------------------FIKGLCGCGRVDW 393
           +   P  VT+N+                                    I G C    +D 
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           AM+LL +M   + +PN+ TY+ L+DGL +  ++  A +LV E+   G   NIVTY++IL 
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            +C+   V  A  LL +M  +G + +  T+ I+I   C+ GK+ +A ++ + +   G  N
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGH-N 384

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++ +YT ++ G C+ G   EA   L KM + G  PN  T+ +++ SLF
Sbjct: 385 LNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLF 433



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 163/319 (51%), Gaps = 5/319 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M +E ++     F  +++ + + G  ++A  +   +   G+KP V  YN ++D   
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + +    I++ M + G+ P++ +Y+IL+   CK   +D A +LL EM +K   P+ V
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y++++  +CK G++  A +L            +  Y+++++ LCK H+++ A  LL +M
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            ++GI PN+ TY+ +I  LC  G +E +  +   + V+G N N++++T +++G+   G  
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA  L ++M   G +PN   Y  +I  L      + A  +  +M E +    V   + L
Sbjct: 404 DEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDL 463

Query: 312 IDGFAKAGNLLGASQIWNR 330
           I      G+  G S +  +
Sbjct: 464 IASIWVTGSSPGNSLLCKK 482



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 167/363 (46%), Gaps = 64/363 (17%)

Query: 261 MIREGFLP----------------NVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPP 303
           ++R GF+P                N + Y +      +N  +D+AVS+  ++ ++N  PP
Sbjct: 2   LLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPP 61

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N+  ++ ++    K+ +      +  +M   G  PN+V    ++   CQ      A S++
Sbjct: 62  NIE-FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVL 120

Query: 364 EKMAFENCPPNTVTFNTFIKGLC--------GC--------------------------- 388
            K+      PNT+T NT IKGLC         C                           
Sbjct: 121 TKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTF 180

Query: 389 ----------GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
                     GRV  A  +L  M      P + TYN L+DG   V +V +A  +   + +
Sbjct: 181 TILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQ 240

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G+  +I +Y+ +++G C+  M+ EA +LL +M  +    + +T++ +I   CK GK++ 
Sbjct: 241 LGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISY 300

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A++L+D +   G+  P+I++Y+S+L  +C +  +  A   L +M N+GI PN  T+ +L+
Sbjct: 301 ALKLVDEMHDRGQP-PNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359

Query: 559 RSL 561
           + L
Sbjct: 360 KGL 362



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 5/222 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + +   M   GVS     +  +IN + ++ + ++A+++   +    + P V  Y+
Sbjct: 227 QVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYS 286

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    + S    +   M   G  PN+ TY+ +L ALCKN++VD A  LL +M N+
Sbjct: 287 SLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQ 346

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  P+  +YT ++  +C+ G++E+AR+     L       V  Y  +I G C +   +EA
Sbjct: 347 GIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEA 406

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
             LL +M D G  PN  TY  II SL      E +  +L +M
Sbjct: 407 LTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 83/177 (46%), Gaps = 5/177 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +I     L+ +M   G   +   + S++++  +    + A+ +  +++  G
Sbjct: 288 LIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQG 347

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  Y  ++  L    +      ++ ++   G   NV+TY ++++  C     D A 
Sbjct: 348 IQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEAL 407

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALI 172
            LL +M + GC P+A +Y  I+ S+ K  + E A +L        F   V++ N LI
Sbjct: 408 TLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 252/514 (49%), Gaps = 7/514 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M    V  +  V  S+I  Y   G    AL++F  + E G+ P V I++ +++   
Sbjct: 314 LKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCS 373

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                   N +Y+ MK  G++P VF  N LLK   K N ++ AY LL      G A   V
Sbjct: 374 KIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVV 432

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  ++  +C+LG+V EA  L  +  G G++     YN +I G CK+  +++A  ++  +
Sbjct: 433 TYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           ++ G+ PN ITY+ ++      G+ E +  +  QM   G  P  ++F S++ G    GR 
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRV 552

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA D  N  I++ F+P  + Y+ +I G    G++D A SV  +M  +   PNV TY++L
Sbjct: 553 SEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSL 612

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I+GF K+  +  A ++ + M   G   ++  Y  ++   C+      A     K+     
Sbjct: 613 INGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGL 672

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PNT+ +N  I        ++ A+ L  +M   +   ++  Y  L+DGLL+  ++  A +
Sbjct: 673 TPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALD 732

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L +E+   GI  +I  YN +++G+C  G +  A ++L +M         + +N +I  + 
Sbjct: 733 LYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHF 792

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           K+G +  A +L D +   G   PD  +Y  L+ G
Sbjct: 793 KEGNLQEAFRLHDEMLDKG-LVPDDTTYDILVNG 825



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 163/653 (24%), Positives = 289/653 (44%), Gaps = 87/653 (13%)

Query: 14  VQYLLQQMKVEGVSC-----SEGV-----FISVI-NSYRRVGLAEQALKMFYRIREFGLK 62
           + Y+      E V C      +GV     F++V+  +  R  + E A ++F  + E  + 
Sbjct: 160 ISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIY 219

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
                   ++ A L   +F      +      G++ +  +Y+I+++A+C+ + +D A KL
Sbjct: 220 GDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKL 279

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCK 177
           +      G  P   +Y  ++ +  +LG   EA  L       R    V+V  +LI G C 
Sbjct: 280 VEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCV 339

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
              +  A  L  E+V+ G+ PNV  +S +I     +GNVE +  +  +M   G  P +  
Sbjct: 340 RGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFI 399

Query: 238 FTSLLKG----------YLLG------------------------GRTHEASDLWNRMIR 263
              LLKG          YLL                         G+ +EA +LW++MI 
Sbjct: 400 LNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIG 459

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G  P++V+Y+ +I G C  G MD+A  V   + E+   PN  TY+ L++G  K G+   
Sbjct: 460 KGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEH 519

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  ++++M++ G  P    +  ++  LC+     +A   +     ++  P ++T+N  I 
Sbjct: 520 AFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIID 579

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G    G +D A  +  +M + E  PN+ TY  L++G  + N++  A ++  ++++ G++L
Sbjct: 580 GYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLEL 639

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY------------- 490
           +I  Y T++ G C+   +  A +   K+L  G   + I +NI+I AY             
Sbjct: 640 DITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLH 699

Query: 491 ----------------------CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
                                  K+GK++ A+ L   +   G   PDI  Y  L+ G+CN
Sbjct: 700 KEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRG-IVPDIFMYNVLINGLCN 758

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            G ++ A   L++M    I P    +N L+   F   G+L   + L D M +K
Sbjct: 759 HGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKE-GNLQEAFRLHDEMLDK 810



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 193/385 (50%), Gaps = 5/385 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
            +G   +A  ++ ++   G+ P++  YNH++     +      + + + +   G++PN  
Sbjct: 443 ELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAI 502

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE----- 156
           TY IL++   K    + A+ +  +M   G  P   ++ +I++ +CK+G+V EAR+     
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +   F      YN +I+G  KE  I+ A  +  EM    I PNVITY+++I+  C    +
Sbjct: 563 IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKM 622

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +L +   M  +G   +I  + +L+ G+        A   +++++  G  PN + Y+ +
Sbjct: 623 DLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIM 682

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I    +  +M+ A+++  +M  N  P ++  Y++LIDG  K G L  A  +++ M+  G 
Sbjct: 683 ISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGI 742

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++  Y  ++  LC +     A  ++++M   N  P  + +NT I G    G +  A +
Sbjct: 743 VPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFR 802

Query: 397 LLDQMKQYECLPNITTYNELLDGLL 421
           L D+M     +P+ TTY+ L++G L
Sbjct: 803 LHDEMLDKGLVPDDTTYDILVNGKL 827



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 228/505 (45%), Gaps = 20/505 (3%)

Query: 63  PTVKIYNHILDALL---AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           P +     +LD LL   A+ R S +        + G         +LL+ L  N    G 
Sbjct: 56  PCIPSQKQVLDTLLLHKADPR-SALRFFKQVETKGGFAKTADVLCLLLQILASNPETHGD 114

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS---VYNALINGLC 176
            K L+   NK    D+     ++        VE   E A R+G  +S   V+N L+    
Sbjct: 115 AKHLL---NKYVFGDSAPAAKVL--------VELLVECAERYGFKLSDSRVFNYLLISYV 163

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           + +KI EA      M++ G+ P V   + +++++     VE +  +  +M  R    + +
Sbjct: 164 RANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCY 223

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           +   L++  L GG+  EA   + +    G   +  +YS +I  +C    +D A  +    
Sbjct: 224 TLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGD 283

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           EE    P+  TY+A+I    + GN   A ++ + M+ +    NV   T ++K  C     
Sbjct: 284 EELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDV 343

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
           + A  L +++      PN   F+  I+     G V+ A +L  +MK     P +   N L
Sbjct: 344 NSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFL 403

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L G  + N ++ A+ L+    + GI  ++VTYN +L  +C  G V EA  L  KM+ +G 
Sbjct: 404 LKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELGKVNEACNLWDKMIGKGI 462

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
               +++N +I  +CK+G +++A ++++ I   G   P+ I+YT L+ G    G  + AF
Sbjct: 463 TPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESG-LKPNAITYTILMEGSFKKGDCEHAF 521

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
               +M+  GI P   T+N ++  L
Sbjct: 522 NMFDQMVAAGIVPTDYTFNSIINGL 546



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 30/269 (11%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID  + + ++M    +S +   + S+IN + +    + ALKM   ++  GL+  + +Y  
Sbjct: 587 IDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYAT 646

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++               +S +   G+ PN   YNI++ A    N ++ A  L  EM N  
Sbjct: 647 LIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNK 706

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
              D   YT+                              LI+GL KE K+  A  L  E
Sbjct: 707 IPCDLKIYTS------------------------------LIDGLLKEGKLSFALDLYSE 736

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+ RGI P++  Y+ +I+ LC+ G +E +  IL +M      P +  + +L+ G+   G 
Sbjct: 737 MLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGN 796

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHG 279
             EA  L + M+ +G +P+   Y  L++G
Sbjct: 797 LQEAFRLHDEMLDKGLVPDDTTYDILVNG 825


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/600 (25%), Positives = 279/600 (46%), Gaps = 75/600 (12%)

Query: 34  ISVINSYRRVGLAEQALKMFYRIREF--GLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            S++ +   +GL E A+  F  +R+      P +  YN +    L E+R   +  +Y +M
Sbjct: 85  FSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDM 144

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA---------------- 135
               ++P  +T+N+L+ ALC+   ++ A ++  +M  KGC P+                 
Sbjct: 145 AVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLH 204

Query: 136 -------------------VSYTTIVSSICKLGQVEEARELA--MR---FGSGVSVYNAL 171
                              V+Y T++SS+C  GQ  EA +L   MR       +  +N  
Sbjct: 205 SHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCR 264

Query: 172 INGLCKEHKIEEAFWLLCEM-VDRGI---DPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           I  LCK  +I EA  +  +M +D  +    PN +TY+ ++   C  G  E +  I   M 
Sbjct: 265 IAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM- 323

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
                 ++ S+   + G +  G+  EA  + N M  +   PN+ +Y+ L+HGLC  G   
Sbjct: 324 KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC-- 345
           +A S+   M E+   P+  TYS L+ G+ + G +L A+ +   MI  GC PN+  YTC  
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNM--YTCNI 441

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM---- 401
           ++  L +     +A  L++ M       + VT NT I GLC  G +D A++++  M    
Sbjct: 442 LLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRG 501

Query: 402 -------------------KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
                                 +CLP+  TY  ++ GL +V RV EA + + E+    + 
Sbjct: 502 SASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLS 561

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            + + ++T ++  C+ G +  AF++L +M  +G      T+N +I     + ++     L
Sbjct: 562 PDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGL 621

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +D ++  G + P++ +Y +++  +   G +++A   L +ML +GI PN  T+ +L+ + F
Sbjct: 622 MDEMKERGIF-PNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFF 680



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 265/558 (47%), Gaps = 39/558 (6%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           R+F       +   + D  L EN  S    +      D   P +  YN+L +   K +RV
Sbjct: 77  RDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHD--PPPISFYNLLFRCSLKESRV 134

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNA-----L 171
           D    L  +M      P   ++  ++S++C++G +E ARE+  +        N      L
Sbjct: 135 DCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGIL 194

Query: 172 INGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGC 231
           + G C+         LL EM   G  PN + Y+T+ISSLC  G    +  ++ +M   G 
Sbjct: 195 VRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGL 254

Query: 232 NPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL----PNVVAYSTLIHGLCSNGSMD 287
           +P+I +F   +      G+  EAS ++  M  +  +    PN V Y+ ++ G CS G  +
Sbjct: 255 SPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFE 314

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           EA ++   M+ NS   ++ +Y+  + G  ++G LL A  I N M      PN+ +Y  +V
Sbjct: 315 EARAIFDSMK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILV 373

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             LC+  MF  A S++  M      P+TVT++T + G C  G++  A  +L +M Q  C 
Sbjct: 374 HGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCF 433

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PN+ T N LL  L +  R  EA +L+  + + G  L+ VT NT+++G+C+AG + +A ++
Sbjct: 434 PNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEI 493

Query: 468 LGKMLIEGTK-----------------------LDAITFNIIIYAYCKQGKVNNA-IQLL 503
           +  M   G+                         D+IT+  II   CK G+V+ A  +LL
Sbjct: 494 VSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLL 553

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           + I  G + +PD + + + ++  C  G +  AF  L++M  +G   +  T+N L++ L S
Sbjct: 554 EMI--GKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGS 611

Query: 564 NLGHLGPVYILDDIMANK 581
               +  +Y L D M  +
Sbjct: 612 E-NQIFEIYGLMDEMKER 628



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/535 (27%), Positives = 259/535 (48%), Gaps = 31/535 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L E   ++  + +  +M  +G   +E     ++  Y R GL    + +   +R  G
Sbjct: 159 LISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSG 218

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    YN ++ +L  E +      +   M+  G+ P++ T+N  + ALCK+ ++  A 
Sbjct: 219 ALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEAS 278

Query: 121 KLLVEMGNKG----CAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSV--YNALI 172
           ++  +M          P+ V+Y  ++   C  G  EEAR +  +M+    +S+  YN  +
Sbjct: 279 RIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWM 338

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            GL +  K+ EA  +L EM ++ I PN+ +Y+ ++  LC  G    +  ILG M   G  
Sbjct: 339 LGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           P+  ++++LL GY   G+  EA+ +   MI+ G  PN+   + L+H L   G   EA  +
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDL 458

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI----WNR-----------------M 331
              M E     +  T + +I+G  KAGNL  A +I    W R                 +
Sbjct: 459 LQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDI 518

Query: 332 ISNG--CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            +NG  C P+ + Y  ++  LC+     +A   + +M  +   P+++ F+TFI   C  G
Sbjct: 519 RNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQG 578

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           ++  A ++L +M++  C  ++ TYN L+ GL   N++ E + L+ E+++ GI  N+ TYN
Sbjct: 579 KLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYN 638

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            I+  +   G + +A  LL +ML +G   +  TF I+I A+ K      A +L +
Sbjct: 639 NIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFE 693



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/511 (27%), Positives = 228/511 (44%), Gaps = 70/511 (13%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSG---VSV 167
           ++D  ++LL+        P   S   +V ++  LG +E A    R L  RF      +S 
Sbjct: 64  QIDHLHQLLLSQHRDFAHPSGFS---LVRTLADLGLLENAISQFRSLRDRFPHDPPPISF 120

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           YN L     KE +++   WL  +M    + P   T++ +IS+LC++G +E +  +  +M 
Sbjct: 121 YNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDKMS 180

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
            +GC PN  S   L++GY   G      DL + M   G LPN VAY+T+I  LC  G   
Sbjct: 181 EKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTV 240

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG----CSPNVVAY 343
           EA  +  +M E    P++ T++  I    K+G +L AS+I+  M  +       PN V Y
Sbjct: 241 EAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTY 300

Query: 344 TCMVKVLCQNNMFH----------------------------------QAHSLIEKMAFE 369
             M++  C   MF                                   +AH ++ +MA +
Sbjct: 301 NLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEK 360

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
           N  PN  ++N  + GLC  G    A  +L  M++    P+  TY+ LL G  R  ++ EA
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEA 420

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             ++ E+ + G   N+ T N +LH + + G   EA  LL  M   G  LD +T N +I  
Sbjct: 421 NYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480

Query: 490 YCKQGKVNNAIQ----------------------LLDRIRGGGEWNPDIISYTSLLWGIC 527
            CK G ++ AI+                      L D    G +  PD I+Y +++ G+C
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
             G + EA   L +M+ + + P+   ++  +
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFI 571



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 137/560 (24%), Positives = 242/560 (43%), Gaps = 69/560 (12%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR---EFGL-KPTVKIYN 69
            + L+++M+  G+S     F   I +  + G   +A ++F  ++   E GL KP    YN
Sbjct: 242 AEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYN 301

Query: 70  HILDALLAENRFSMINPIYSNMK------------------RDG---------------- 95
            +L+   +E  F     I+ +MK                  R G                
Sbjct: 302 LMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKN 361

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           ++PN+++YNIL+  LCK      A  +L  M   G APD V+Y+T++   C+ G++ EA 
Sbjct: 362 IKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEAN 421

Query: 155 ---RELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
              RE+ ++ G   ++Y  N L++ L KE +  EA  LL  M +RG   + +T +T+I+ 
Sbjct: 422 YVLREM-IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480

Query: 210 LCDVGNVETSLGILGQMFVRG-----------------------CNPNIHSFTSLLKGYL 246
           LC  GN++ ++ I+  M+ RG                       C P+  ++ +++ G  
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR  EA      MI +   P+ + + T I+  C  G +  A  V  +ME+  C  ++ 
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLR 600

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY++LI G      +     + + M   G  PNV  Y  ++  L +      A  L+++M
Sbjct: 601 TYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEM 660

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
             +   PN  TF   I           A +L  ++    C    + Y+ + + LL     
Sbjct: 661 LQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMFNELLAGGET 719

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A EL        + L    Y  ++  +C+ G + +A  +L KM+ +    D  +F  +
Sbjct: 720 LKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPV 779

Query: 487 IYAYCKQGKVNNAIQLLDRI 506
           I    K+G  + A +  +R+
Sbjct: 780 IDELGKRGSKHAADEFAERM 799



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 39/274 (14%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           P+  TY  ++  LCK  RVD A K L+EM  K  +PD++ + T + + CK G++  A   
Sbjct: 527 PDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRV 586

Query: 155 -RELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
            +E+  +     +  YN+LI GL  E++I E + L+ EM +RGI PNV TY+ IIS L +
Sbjct: 587 LKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSE 646

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY--------------------------- 245
            G ++ +  +L +M  +G +PNI++F  L+  +                           
Sbjct: 647 GGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLY 706

Query: 246 -------LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                  L GG T +A +L+   +          Y  LI  LC +G +D+A  + ++M +
Sbjct: 707 SFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMD 766

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
                +  ++  +ID   K G+   A +   RM+
Sbjct: 767 KQYSFDPASFMPVIDELGKRGSKHAADEFAERMM 800


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 230/464 (49%), Gaps = 30/464 (6%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E A  +F+ +      P++  +  +L A     R+  +      M+  G+  +++++ IL
Sbjct: 53  EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           +   C+ +R+  A  +L +M   G  P  V+                       FGS   
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVT-----------------------FGS--- 146

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
               L++G C  ++I +AF L+  MV  G +PNV+ Y+T+I  LC  G +  +L +L +M
Sbjct: 147 ----LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             +G   ++ ++ +LL G    GR  +A+ +   M++    P+VV ++ LI      G++
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNL 262

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
           DEA  +  +M ++S  PN  TY+++I+G    G L  A + ++ M S GC PNVV Y  +
Sbjct: 263 DEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTL 322

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +   C+  M  +   L ++M+ E    +  T+NT I G C  G++  A+ +   M     
Sbjct: 323 ISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
            P+I T+  LL GL     ++ A     ++ +    + IV YN ++HG+C+A  V +A++
Sbjct: 383 TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWE 442

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           L  ++ +EG K DA T+ I+I   CK G    A +L+ R++  G
Sbjct: 443 LFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 223/438 (50%), Gaps = 6/438 (1%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVYN-- 169
           R + A+ L  EM +    P  V +T ++++   L + E     + +   +G    +Y+  
Sbjct: 51  RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
            LI+  C+  ++  A  +L +M+  G +P+++T+ +++   C V  +  +  ++  M   
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN+  + +L+ G    G  + A +L N M ++G   +VV Y+TL+ GLC +G   +A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +   M + S  P+V T++ALID F K GNL  A +++  MI +   PN V Y  ++  
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC +   + A    + MA + C PN VT+NT I G C    VD  MKL  +M       +
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           I TYN L+ G  +V +++ A ++   +    +  +I+T+  +LHG+C  G +  A     
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M      +  + +NI+I+  CK  KV  A +L  R+   G   PD  +YT ++ G+C +
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG-VKPDARTYTIMILGLCKN 469

Query: 530 GGMQEAFIYLQKMLNEGI 547
           G  +EA   +++M  EGI
Sbjct: 470 GPRREADELIRRMKEEGI 487



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 224/447 (50%), Gaps = 31/447 (6%)

Query: 115 RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALING 174
           + D A+ L  EM      P  V +T +++ I K+                          
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKM-------------------------- 617

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
               +K +   +L  +M + GI  ++ +++ +I   C    +  +L +LG+M   G  P+
Sbjct: 618 ----NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPS 673

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           I +  SLL G+  G R  EA  L + M   GF+PNVV Y+T+I+GLC N  ++ A+ V Y
Sbjct: 674 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 733

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            ME+     +  TY+ LI G + +G    A+++   M+     PNV+ +T ++    +  
Sbjct: 734 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 793

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
              +A +L ++M   +  PN  T+N+ I G C  G +  A  + D M    C P++ TYN
Sbjct: 794 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 853

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
            L+ G  +  RV++  +L  E+   G+  +  TYNT++HG C+AG +  A ++  +M+  
Sbjct: 854 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 913

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D +T+NI++   C  GK+  A+ +++ ++   E + DII+Y  ++ G+C +  ++E
Sbjct: 914 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ-KSEMDVDIITYNIIIQGLCRTDKLKE 972

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           A+   + +  +G+ P+   +  ++  L
Sbjct: 973 AWCLFRSLTRKGVKPDAIAYITMISGL 999



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 218/418 (52%), Gaps = 5/418 (1%)

Query: 98   PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK-----LGQVE 152
            P++  +  +L  + K N+ D    L  +M N G + D  S+T ++   C+     L    
Sbjct: 602  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 153  EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
              + + + F   +    +L+NG C+ ++ +EA  L+  M   G  PNV+ Y+T+I+ LC 
Sbjct: 662  LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 213  VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
              ++  +L +   M  +G   +  ++ +L+ G    GR  +A+ L   M++    PNV+ 
Sbjct: 722  NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781

Query: 273  YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            ++ LI      G++ EA ++  +M   S  PNV TY++LI+GF   G L  A  +++ M+
Sbjct: 782  FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 333  SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            S GC P+VV Y  ++   C++        L  +M ++    +  T+NT I G C  G+++
Sbjct: 842  SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901

Query: 393  WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
             A K+ ++M      P+I TYN LLD L    ++++A  +V +++K  + ++I+TYN I+
Sbjct: 902  VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961

Query: 453  HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
             G+CR   + EA+ L   +  +G K DAI +  +I   C++G    A +L  R++  G
Sbjct: 962  QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 227/434 (52%), Gaps = 5/434 (1%)

Query: 47   EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
            + A  +F  + +    P++  +  +L  +   N+F ++  +Y  M+  G+  +++++ IL
Sbjct: 586  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 107  LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
            +   C+ +R+  A  LL +M   G  P  V+  ++++  C+  + +EA  L        F
Sbjct: 646  IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 162  GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
               V +YN +INGLCK   +  A  +   M  +GI  + +TY+T+IS L + G    +  
Sbjct: 706  VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 222  ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
            +L  M  R  +PN+  FT+L+  ++  G   EA +L+  MIR   +PNV  Y++LI+G C
Sbjct: 766  LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825

Query: 282  SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             +G + +A  +   M    C P+V TY+ LI GF K+  +    +++  M   G   +  
Sbjct: 826  IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885

Query: 342  AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
             Y  ++   CQ    + A  +  +M      P+ VT+N  +  LC  G+++ A+ +++ +
Sbjct: 886  TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945

Query: 402  KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            ++ E   +I TYN ++ GL R +++KEA+ L   + + G++ + + Y T++ G+CR G+ 
Sbjct: 946  QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 1005

Query: 462  VEAFQLLGKMLIEG 475
             EA +L  +M  +G
Sbjct: 1006 READKLCRRMKEDG 1019



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/599 (23%), Positives = 273/599 (45%), Gaps = 24/599 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  E++    LL +M+ +G+      + +++      G    A +M   + +  
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  +  ++D  + +        +Y  M +  ++PN  TYN ++  LC + R+  A 
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGL 175
           K    M +KGC P+ V+Y T++S  CK   V+E  +L  R     F + +  YN LI+G 
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  K+  A  + C MV R + P++IT+  ++  LC  G +E++L     M        I
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G     +  +A +L+ R+  EG  P+   Y+ +I GLC NG   EA  +  +
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGAS--QIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           M+E      +      ++  + +   +  S  +IW R  SN   P  +     +      
Sbjct: 482 MKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERSKSN---PFWMQRLIPIAFSSSV 538

Query: 354 NMFHQAHSLIEKMAFENCPPNTVT-----------FNTFIKGLCGCGRVDWAMKLLDQMK 402
             F + H L+ +    N P  +++           +   ++    C + D A  L  +M 
Sbjct: 539 KGFVRRHYLLLERG--NNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEML 596

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           Q   +P+I  +  +L  + ++N+      L  ++E  GI  ++ ++  ++H  CR   + 
Sbjct: 597 QSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLS 656

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
            A  LLGKM+  G +   +T   ++  +C+  +   A+ L+D + G G + P+++ Y ++
Sbjct: 657 LALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG-FVPNVVIYNTV 715

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           + G+C +  +  A      M  +GI  +  T+N L+  L ++        +L D++  K
Sbjct: 716 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 774



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 195/391 (49%), Gaps = 1/391 (0%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L  G     + E+AF L  EMV     P+++ ++ ++++  ++   ET +    +M + G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            + +++SFT L+  +    R   A  +  +M++ G+ P++V + +L+HG C    + +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S+   M ++   PNV  Y+ LIDG  K G L  A ++ N M   G   +VV Y  ++  L
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C +  +  A  ++  M   +  P+ VTF   I      G +D A +L  +M Q    PN 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TYN +++GL    R+ +A +    +   G   N+VTYNT++ G C+  MV E  +L  +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M  EG   D  T+N +I+ YC+ GK+  A+ +   +       PDII++  LL G+C +G
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV-SRRVTPDIITHCILLHGLCVNG 400

Query: 531 GMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            ++ A +    M           +N+++  L
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGL 431



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 5/397 (1%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           + V Y  Q+M++ G+S     F  +I+ + R      AL +  ++ + G +P++  +  +
Sbjct: 88  ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSL 147

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L      NR      +   M + G EPNV  YN L+  LCKN  ++ A +LL EM  KG 
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGL 207

Query: 132 APDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFW 186
             D V+Y T+++ +C  G+  +A    R++  R     V  + ALI+   K+  ++EA  
Sbjct: 208 GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQE 267

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L  EM+   +DPN +TY++II+ LC  G +  +      M  +GC PN+ ++ +L+ G+ 
Sbjct: 268 LYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC 327

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                 E   L+ RM  EGF  ++  Y+TLIHG C  G +  A+ +   M      P++ 
Sbjct: 328 KFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           T+  L+ G    G +  A   ++ M  +     +VAY  M+  LC+ +   +A  L  ++
Sbjct: 388 THCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRL 447

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             E   P+  T+   I GLC  G    A +L+ +MK+
Sbjct: 448 PVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 7/373 (1%)

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
           +R S    +   M + G EP++ T+  LL   C  NR+  A+ L++ M   G  P+ V Y
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179

Query: 139 TTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
            T++  +CK G++  A EL         G+ V  YN L+ GLC   +  +A  +L +M+ 
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           R I+P+V+T++ +I      GN++ +  +  +M     +PN  ++ S++ G  + GR ++
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A   ++ M  +G  PNVV Y+TLI G C    +DE + +  +M       ++ TY+ LI 
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
           G+ + G L  A  I+  M+S   +P+++ +  ++  LC N     A    + M       
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
             V +N  I GLC   +V+ A +L  ++      P+  TY  ++ GL +    +EA EL+
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479

Query: 434 TEIEKCGI--QLN 444
             +++ GI  Q+N
Sbjct: 480 RRMKEEGIICQMN 492



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 123/544 (22%), Positives = 245/544 (45%), Gaps = 34/544 (6%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  E AL  F  +RE      +  YN ++  L   ++      ++  +  +G++P+  TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKG--CAPDA---------VSYTTIVSSICKLGQVE 152
            I++  LCKN     A +L+  M  +G  C  +A          S   I  S+ ++ +  
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEISLSLREIWERS 519

Query: 153 EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT---------- 202
           ++    M+    ++ +++ + G  + H +         +++RG +P              
Sbjct: 520 KSNPFWMQRLIPIA-FSSSVKGFVRRHYL---------LLERGNNPETSLSRSFSGASHH 569

Query: 203 --YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             Y   + +       + +  +  +M      P+I  FT +L       +      L+++
Sbjct: 570 HHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHK 629

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M   G   ++ +++ LIH  C    +  A+++  +M +    P++ T  +L++GF +   
Sbjct: 630 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 689

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              A  + + M   G  PNVV Y  ++  LC+N   + A  +   M  +    + VT+NT
Sbjct: 690 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I GL   GR   A +LL  M + +  PN+  +  L+D  ++   + EA  L  E+ +  
Sbjct: 750 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 809

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
           +  N+ TYN++++G C  G + +A  +   M+ +G   D +T+N +I  +CK  +V + +
Sbjct: 810 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L   +   G    D  +Y +L+ G C +G +  A     +M++ G+ P+  T+N+L+  
Sbjct: 870 KLFCEMTYQGLVG-DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDC 928

Query: 561 LFSN 564
           L +N
Sbjct: 929 LCNN 932



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 83/149 (55%), Gaps = 1/149 (0%)

Query: 12   DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
            DG++ L  +M  +G+      + ++I+ Y + G    A K+F R+ + G+ P +  YN +
Sbjct: 867  DGMK-LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925

Query: 72   LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
            LD L    +      +  ++++  M+ ++ TYNI+++ LC+ +++  A+ L   +  KG 
Sbjct: 926  LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985

Query: 132  APDAVSYTTIVSSICKLGQVEEARELAMR 160
             PDA++Y T++S +C+ G   EA +L  R
Sbjct: 986  KPDAIAYITMISGLCRKGLQREADKLCRR 1014



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  G L   R ++AF L  E+       +IV +  +L                 KM + 
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G   D  +F I+I+ +C+  +++ A+ +L ++   G + P I+++ SLL G C    + +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG-YEPSIVTFGSLLHGFCLVNRIGD 159

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           AF  +  M+  G  PN   +N L+  L  N
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKN 189


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 279/561 (49%), Gaps = 10/561 (1%)

Query: 17  LLQQMKVEGVSC-SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL++MK + +   S+  + SVI +  + G  + A+++   +   G+   V     ++   
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              N       ++  M+++G  PN  T+++L++   KN  ++ A +   +M   G  P  
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409

Query: 136 VSYTTIVSSICKLGQVEEAREL-AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEM 191
               TI+    K  + EEA +L    F +G++   V N +++ LCK+ K +EA  LL +M
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RGI PNV++Y+ ++   C   N++ +  +   +  +G  PN ++++ L+ G       
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDE 529

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSA 310
             A ++ N M       N V Y T+I+GLC  G   +A  +   M EE     +  +Y++
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G +  A   +  M  NG SPNV+ YT ++  LC+NN   QA  + ++M  + 
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              +   +   I G C    ++ A  L  ++ +    P+   YN L+ G   +  +  A 
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAAL 709

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  ++ K G++ ++ TY T++ G+ + G ++ A +L  +M   G   D I + +I+   
Sbjct: 710 DLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGL 769

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K+G+    +++ + ++      P+++ Y +++ G    G + EAF    +ML++GI P+
Sbjct: 770 SKKGQFVKVVKMFEEMKKNN-VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828

Query: 551 FATWNVLVRSLFSNLGHLGPV 571
            AT+++LV      +G+L PV
Sbjct: 829 GATFDILVS---GQVGNLQPV 846



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 164/679 (24%), Positives = 280/679 (41%), Gaps = 113/679 (16%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L+   K  G   +   F  ++N+Y +    + A+ +  ++ E  + P     N  L 
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206

Query: 74  ALLAENRFSMINPIYSNMK-----------------------------------RDGMEP 98
           AL+  N  +    +YS M                                      G EP
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEP 266

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSICKLGQVEEAREL 157
           +   Y++ ++A CK   +  A  LL EM  K  C P   +YT+++ +  K G +++A  L
Sbjct: 267 DSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRL 326

Query: 158 AMR-FGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                  G+S+      +LI G CK + +  A  L  +M   G  PN +T+S +I     
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG------------------------ 248
            G +E +L    +M V G  P++    ++++G+L G                        
Sbjct: 387 NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC 446

Query: 249 ----------GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
                     G+T EA++L ++M   G  PNVV+Y+ ++ G C   +MD A  V   + E
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
               PN  TYS LIDG  +  +   A ++ N M S+    N V Y  ++  LC+     +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566

Query: 359 AHSLIEKM-------------------------------AFEN-----CPPNTVTFNTFI 382
           A  L+  M                               A+E        PN +T+ + +
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
            GLC   R+D A+++ D+MK      +I  Y  L+DG  + + ++ A  L +E+ + G+ 
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            +   YN+++ G    G +V A  L  KML +G + D  T+  +I    K G +  A +L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746

Query: 503 LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
              ++  G   PD I YT ++ G+   G   +     ++M    + PN   +N ++   +
Sbjct: 747 YTEMQAVG-LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805

Query: 563 SNLGHLGPVYILDDIMANK 581
              G+L   + L D M +K
Sbjct: 806 RE-GNLDEAFRLHDEMLDK 823



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 225/459 (49%), Gaps = 40/459 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF------- 53
           +IE   +  E++      ++M+V G++ S     ++I  + +    E+ALK+F       
Sbjct: 380 LIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439

Query: 54  ---------------------------YRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
                                       ++   G+ P V  YN+++     +    +   
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++SN+   G++PN +TY+IL+    +N+    A +++  M +     + V Y TI++ +C
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559

Query: 147 KLGQVEEAREL------AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           K+GQ  +AREL        R       YN++I+G  KE +++ A     EM   GI PNV
Sbjct: 560 KVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNV 619

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           ITY+++++ LC    ++ +L +  +M  +G   +I ++ +L+ G+        AS L++ 
Sbjct: 620 ITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE 679

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           ++ EG  P+   Y++LI G  + G+M  A+ +  +M ++    ++ TY+ LIDG  K GN
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           L+ AS+++  M + G  P+ + YT +V  L +   F +   + E+M   N  PN + +N 
Sbjct: 740 LILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNA 799

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            I G    G +D A +L D+M     LP+  T++ L+ G
Sbjct: 800 VIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 205/428 (47%), Gaps = 5/428 (1%)

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDR 194
           + S  T ++S+     V+ A+       S    +N L+N   K+ + + A  ++ +M++ 
Sbjct: 135 STSNPTPMASVLVSKLVDSAKSFGFEVNS--RAFNYLLNAYSKDRQTDHAVDIVNQMLEL 192

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEA 254
            + P     +  +S+L    ++  +  +  +M   G + +  +   L++  L   +  EA
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEA 252

Query: 255 SDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS-CPPNVTTYSALID 313
            ++ +R I  G  P+ + YS  +   C    +  A S+  +M+E   C P+  TY+++I 
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVIL 312

Query: 314 GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPP 373
              K GN+  A ++ + M+S+G S NVVA T ++   C+NN    A  L +KM  E   P
Sbjct: 313 ASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSP 372

Query: 374 NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELV 433
           N+VTF+  I+     G ++ A++   +M+     P++   + ++ G L+  + +EA +L 
Sbjct: 373 NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF 432

Query: 434 TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
            E  + G+  N+   NTIL  +C+ G   EA +LL KM   G   + +++N ++  +C+Q
Sbjct: 433 DESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             ++ A  +   I   G   P+  +Y+ L+ G   +   Q A   +  M +  I  N   
Sbjct: 492 KNMDLARIVFSNILEKG-LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVV 550

Query: 554 WNVLVRSL 561
           +  ++  L
Sbjct: 551 YQTIINGL 558


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/541 (27%), Positives = 255/541 (47%), Gaps = 43/541 (7%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G    E +F++++    R  +  Q +K+   I +FG  P++KI+N ILD L+ E+   + 
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKED-IDLA 64

Query: 85  NPIY-SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
              Y   M  +G+  + +T+ IL+K LC  NR+  A+KLL  M ++G  P+ V Y T++ 
Sbjct: 65  REFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIH 124

Query: 144 SICKLGQVEEARELAMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
           ++CK G+V  AR L         V +N LI+  C+E  + +A  LL +    G  P+V+T
Sbjct: 125 ALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVT 184

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
            + ++  LC  G V   + +L ++   G   ++ ++ +L+KG+ + G+      +   M 
Sbjct: 185 ATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDME 244

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
            +G LPNV  Y+ L  G C +G +D A+ +   M+ +    N  TY  LI G    G + 
Sbjct: 245 IKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRME 304

Query: 323 GASQIWNRMISN--GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
              +I   M  +  G    +  Y  ++  L + N F +A   + KM  E   P  V  + 
Sbjct: 305 DGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKM--EKLFPRAVDRSL 362

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G C  G +  A ++ DQM +   +P++  Y  L+ G  +   V+EAFEL+ E+   G
Sbjct: 363 RILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHG 422

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
                 T+N ++   C  G V  A +L+  M+  G   D  +++ ++ A C +G    A+
Sbjct: 423 YFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAV 482

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +L                                   +LQ M+ + I P+++TWN ++  
Sbjct: 483 RL-----------------------------------FLQ-MVEKDILPDYSTWNSMLLC 506

Query: 561 L 561
           L
Sbjct: 507 L 507



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 169/366 (46%), Gaps = 15/366 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGL------AEQALKMFYRIREFGLKPTVKIYNH 70
           L+Q + +   S S G    V+ + + VG+        + +++  R+   G    V  YN 
Sbjct: 163 LVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNT 222

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++       +  + + +  +M+  G  PNV TYNIL    C +  +D A  L  +M   G
Sbjct: 223 LIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDG 282

Query: 131 CAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSG--VSVYNALINGLCKEHKIEE 183
              + ++Y T++  +C  G++E+  ++       R G+G  +S YN++I GL K+++ EE
Sbjct: 283 INWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEE 342

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A   L +M    + P  +  S  I   C+ G++  +  +  QM   G  P++  +  L+ 
Sbjct: 343 ALEFLTKM--EKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIH 400

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           G+   G   EA +L N M+  G+ P    ++ LI   C  G +  A+ +   M    C P
Sbjct: 401 GFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMVGRGCLP 460

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           ++ +YS ++D     G+   A +++ +M+     P+   +  M+  L Q  ++ +  +L 
Sbjct: 461 DMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWLEGDNLF 520

Query: 364 EKMAFE 369
              A+ 
Sbjct: 521 HLTAYR 526



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 142/299 (47%), Gaps = 5/299 (1%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+   + T++ GL     + + + V   + +    P++  +++++D   K    L  
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKEDIDLAR 65

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
                +M+ NG S +   +  ++K LC  N    A  L++ M      PNTV +NT I  
Sbjct: 66  EFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHA 125

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           LC  G+V  A  L+++M +    P+  T+N L+    +   + +A  L+ +    G   +
Sbjct: 126 LCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPD 181

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +VT   ++  +C+AG V E  ++L ++   G  +D + +N +I  +C  GK     ++L 
Sbjct: 182 VVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLK 241

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            +   G   P++ +Y  L  G C+SG +  A      M  +GI  NF T++ L+R L S
Sbjct: 242 DMEIKGCL-PNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCS 299



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 62/132 (46%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I   + +  QM  EG   S  V++ +I+ + + G   +A ++   + + G  PT   +N 
Sbjct: 373 IGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNA 432

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ A   + +      +  +M   G  P++ +Y+ ++ ALC       A +L ++M  K 
Sbjct: 433 LISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKD 492

Query: 131 CAPDAVSYTTIV 142
             PD  ++ +++
Sbjct: 493 ILPDYSTWNSML 504


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 278/561 (49%), Gaps = 10/561 (1%)

Query: 17  LLQQMKVEGVSC-SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           LL++MK + +   S+  + SVI +  + G  E A++    +   G+   V     ++   
Sbjct: 289 LLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGH 348

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
              N       ++  M+ +G  PN  T+++L++   KN  ++ A +   +M + G  P  
Sbjct: 349 CKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSV 408

Query: 136 VSYTTIVSSICKLGQVEEAREL-AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEM 191
               TI+    K  + EEA +L    F +G++   + N +++ LCK+ KI++A  LL +M
Sbjct: 409 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKM 468

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             RGI PNV++Y+ ++ + C   N++ +  +   M  +G  PN ++++ L+ G       
Sbjct: 469 ESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDE 528

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPPNVTTYSA 310
               ++ N+M       N V Y T+I+GLC  G   +A  +   M EE     +  +Y++
Sbjct: 529 QNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNS 588

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +IDGF K G +  A   +  M +NG SPNV+ YT ++  LC+NN   QA  + ++M  + 
Sbjct: 589 IIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKG 648

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              +   +   I G C    ++ A  L  ++ +    P+   YN L+ G   +  +  A 
Sbjct: 649 VKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAAL 708

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L  ++ K G++ ++ TY T++ G+ + G ++ A  L  +M   G   D I + +I+   
Sbjct: 709 DLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGL 768

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K+G+    +++ + ++      P+++ Y +++ G    G + EAF    +ML++GI P+
Sbjct: 769 SKKGQFVKVVKMFEEMKKNN-VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 827

Query: 551 FATWNVLVRSLFSNLGHLGPV 571
            AT+++LV      +G   P+
Sbjct: 828 GATFDILVS---GKVGKFQPI 845



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 268/591 (45%), Gaps = 44/591 (7%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L+   K+ G   +   F  ++N+Y +    + A+ +  ++ E G+ P V   N  L 
Sbjct: 146 VSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLS 205

Query: 74  ALLAENRFSMINPIYSNMK-----------------------------------RDGMEP 98
           AL+  N  +    +YS M                                      G EP
Sbjct: 206 ALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEP 265

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSICKLGQVEEA-RE 156
           +   Y++ ++A CK   +  A  LL EM  K  C P   +YT+++ +  K G +E+A R 
Sbjct: 266 DSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRW 325

Query: 157 LAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                  G+S+      +LI G CK + +  A  L  +M + G  PN +T+S +I     
Sbjct: 326 KDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSK 385

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +E +L    +M   G  P++    ++++G+L G +  EA  L++     G L NV  
Sbjct: 386 NGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFI 444

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
            +T++  LC  G +D+A  +  +ME     PNV +Y+ ++    +  N+  A  +++ M+
Sbjct: 445 CNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML 504

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
             G  PN   Y+ ++    +N+       ++ +M   N   N V + T I GLC  G+  
Sbjct: 505 EKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTS 564

Query: 393 WAMKLLDQM-KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
            A +LL  M ++     +  +YN ++DG ++   +  A     E+   GI  N++TY ++
Sbjct: 565 KARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSL 624

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G+C+   + +A ++  +M  +G KLD   +  +I+ +CK+  + +A  L   +   G 
Sbjct: 625 MDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEG- 683

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            NP    Y SL+ G  N G M  A    +KML +G+  +  T+  L+  L 
Sbjct: 684 LNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 734



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 248/518 (47%), Gaps = 44/518 (8%)

Query: 83  MINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
           +++ +  + K  G E N   +N LL A  K+ + D A  ++ +M   G  P        +
Sbjct: 145 LVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTL 204

Query: 143 SSICKLGQVEEARELAMRFGS-GVSVYNA----LINGLCKEHKIEEAFWLLCEMVDRGID 197
           S++ +   + EA+EL  R  + GV   N     L+    +E K  EA  +    ++RG +
Sbjct: 205 SALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAE 264

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASD 256
           P+ + YS  + + C   N+  +  +L +M  +  C P+  ++TS++   +  G   +A  
Sbjct: 265 PDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIR 324

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
             + M+ +G   NVVA ++LI G C N  +  A+ + Y+ME     PN  T+S LI+ F+
Sbjct: 325 WKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFS 384

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K G +  A + + +M S G +P+V     +++   +     +A  L ++ +FE    N  
Sbjct: 385 KNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE-SFETGLANVF 443

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE--------------------- 415
             NT +  LC  G++D A +LL +M+     PN+ +YN                      
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503

Query: 416 --------------LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
                         L+DG  + +  +   E+V ++    I++N V Y TI++G+C+ G  
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQT 563

Query: 462 VEAFQLLGKMLIEGTK-LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
            +A +LL  M+ E    +  +++N II  + K+G+++ A+   + +   G  +P++I+YT
Sbjct: 564 SKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANG-ISPNVITYT 622

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           SL+ G+C +  M +A     +M N+G+  +   +  L+
Sbjct: 623 SLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 660


>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/524 (25%), Positives = 258/524 (49%), Gaps = 7/524 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  MK  G+  +   +  +I    + G   +A+ ++  +   G+ PTV+ Y+ ++ A   
Sbjct: 159 LPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGK 218

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G+ PNV++Y I ++ L +  R++ AY++L +M  +GC PD V+
Sbjct: 219 RRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVT 278

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
            T ++  +C  G++ +A+++  +  +         Y  L++             +   + 
Sbjct: 279 NTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALK 338

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + NV++Y+  + +LC VG V+ +L +  +M  +G  P  +S+ SL+ G+L   R +
Sbjct: 339 ADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFN 398

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A +L+N M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 399 RALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVL 458

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G AK G L  A ++++ + + G SP+ + YT M+K   + +   +A  +  +M    C 
Sbjct: 459 YGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCA 518

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   GR + A K+  ++K+    P   TYN LL GL R  +VKE  +L
Sbjct: 519 PDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQL 578

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           +  +       NI+TYNT+L  +C+ G V  A  +L  M + G   D  ++N ++Y   K
Sbjct: 579 LEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVK 638

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           +G+++ A  +  +++      PD  +  ++L     SG M+EA 
Sbjct: 639 EGRLDEAFWMFCQMK--KVLAPDYATVCTILPSFVRSGLMKEAL 680



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 275/586 (46%), Gaps = 43/586 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M + G + +    +  IN + + G + +ALK +  ++  G+ P V   N +L  L 
Sbjct: 403 LFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLA 462

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R  M   ++  +K  G+ P+  TY +++K   K +  D A K+  EM    CAPD +
Sbjct: 463 KTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVL 522

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +  +++  + K G+  EA ++      M        YN L+ GL +E K++E   LL  M
Sbjct: 523 AMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM 582

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 PN+ITY+T++  LC  G V  +L +L  M + GC P++ S+ +++ G +  GR 
Sbjct: 583 NSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRL 642

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTTYS 309
            EA  ++ +M ++   P+     T++     +G M EA+     Y ++ +S     + +S
Sbjct: 643 DEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHS 701

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L++G  K      + +    + S+G   + +  + +++  C++     AH L++K    
Sbjct: 702 -LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENL 760

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
                T ++N  I GL     +D A +L  +MK+  C P+  TY+ +LD + +  R+++ 
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++  E+   G +   VTYNTI+ G+ ++ M+ EA  L  +++ EG      T+  ++  
Sbjct: 821 LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880

Query: 490 YCKQGKVNNAIQLLD---------------------RIRGGGE-------------WNPD 515
             K G + +A  L D                     RI G  E              NPD
Sbjct: 881 LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I SYT ++  +C  G + +   Y +++ + G+ P+  T+N+L+  L
Sbjct: 941 IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 241/525 (45%), Gaps = 33/525 (6%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I+   + G   +A K+FY ++E  L+PT   YN +L  L  E +   +  +   M  +
Sbjct: 526  SLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN 585

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
               PN+ TYN +L  LCKN  V+ A  +L  M   GC PD                    
Sbjct: 586  SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD-------------------- 625

Query: 155  RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                      +S YN ++ GL KE +++EAFW+ C+M  + + P+  T  TI+ S    G
Sbjct: 626  ----------LSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSG 674

Query: 215  NVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             ++ +L  + +  ++     +  S  SL++G L    T ++ +    +   G L + +  
Sbjct: 675  LMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFL 734

Query: 274  STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
            S +I   C +     A  +  + E         +Y+ALI G      +  A ++++ M  
Sbjct: 735  SPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKR 794

Query: 334  NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             GC P+   Y  ++  + ++        + E+M  +      VT+NT I GL     +D 
Sbjct: 795  LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDE 854

Query: 394  AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
            A+ L  Q+      P   TY  LLDGLL+   +++A  L  E+ +CG + N   YN +L+
Sbjct: 855  AINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLN 914

Query: 454  GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            G   AG   +  +L   M+ +G   D  ++ ++I   C  G++N+ +    ++   G   
Sbjct: 915  GYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG-LE 973

Query: 514  PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            PD+I+Y  L+ G+  SG ++EA      M  +GI PN  T+N L+
Sbjct: 974  PDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 257/558 (46%), Gaps = 7/558 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E +     +  V  +   M+ + +  + G F +V  +    G    A      ++E G
Sbjct: 107 MLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++  L+          +Y  M  DG+ P V TY++L+ A  K    +   
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL EM  +G  P+  SYT  +  + + G++EEA  +  +         V     LI  L
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ +A  +  +M      P+ +TY T++    D G+  +   I   +   G N N+
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+T+ +      GR  EA D+++ M ++G +P   +Y++LI G       + A+ +   
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   PN  T+   I+   K+G  L A + +  M S G  P+VVA   ++  L +   
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  +  ++      P+ +T+   IK        D AMK+  +M +  C P++   N 
Sbjct: 467 LGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNS 526

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+D L +  R  EA+++  E+++  ++    TYNT+L G+ R G V E  QLL  M    
Sbjct: 527 LIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNS 586

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + IT+N ++   CK G+VN A+ +L  +   G   PD+ SY ++++G+   G + EA
Sbjct: 587 FPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG-CMPDLSSYNTVMYGLVKEGRLDEA 645

Query: 536 FIYLQKMLNEGICPNFAT 553
           F    +M  + + P++AT
Sbjct: 646 FWMFCQM-KKVLAPDYAT 662



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 235/479 (49%), Gaps = 42/479 (8%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            +D   ++  QMK + ++       +++ S+ R GL ++AL   + +RE+ L+P  K+   
Sbjct: 642  LDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEAL---HTVREYILQPDSKV--- 694

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNV-FTYNILLKALCKNNRVDGAYKLLVEMGNK 129
                    +R S+ + +   +KRDG E ++ F  NI                      + 
Sbjct: 695  --------DRSSVHSLMEGILKRDGTEKSIEFAENI---------------------ASS 725

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKIEEA 184
            G   D +  + I+   CK  +   A EL  +F + GVS+    YNALI GL  E  I+ A
Sbjct: 726  GLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIA 785

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L  EM   G DP+  TY  I+ ++     +E  L I  +M  +G      ++ +++ G
Sbjct: 786  EELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISG 845

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
             +      EA +L+ +++ EGF P    Y  L+ GL  +G++++A ++  +M E  C PN
Sbjct: 846  LVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPN 905

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
               Y+ L++G+  AG+     +++  M+  G +P++ +YT ++  LC +   +   S  +
Sbjct: 906  CAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFK 965

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            ++      P+ +T+N  I GL   GR++ A+ L + M++    PN+ TYN L+  L +  
Sbjct: 966  QLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 1025

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +  EA ++  E+   G + N+ TYN ++ G   +G    AF   G+M++ G + ++ T+
Sbjct: 1026 KAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 189/393 (48%), Gaps = 31/393 (7%)

Query: 30   EGVFIS-VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
            + +F+S +I  + +   A  A ++  +    G+      YN ++  L+ E+   +   ++
Sbjct: 730  DDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELF 789

Query: 89   SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
            S MKR G +P+ FTY+++L A+ K+ R++   K+  EM NKG     V+Y TI+S     
Sbjct: 790  SEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS----- 844

Query: 149  GQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                                     GL K   ++EA  L  +++  G  P   TY  ++ 
Sbjct: 845  -------------------------GLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 879

Query: 209  SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             L   GN+E +  +  +M   GC PN   +  LL GY + G T +  +L+  M+ +G  P
Sbjct: 880  GLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNP 939

Query: 269  NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
            ++ +Y+ +I  LC++G +++ +S   Q+ +    P++ TY+ LI G  K+G L  A  ++
Sbjct: 940  DIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLY 999

Query: 329  NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            N M   G +PN+  Y  ++  L +     +A  + E++  +   PN  T+N  I+G    
Sbjct: 1000 NDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVS 1059

Query: 389  GRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            G  + A     +M    C PN +TY +L + +L
Sbjct: 1060 GSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 1092



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/599 (21%), Positives = 268/599 (44%), Gaps = 43/599 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K G+  +   V  +   +K +G + +   + + +++  +VG  ++AL +F  +++ G
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN ++   L  +RF+    ++++M   G  PN +T+ + +    K+     A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           K    M +KG  PD V+   ++  + K G++  A+ +     AM        Y  +I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K    +EA  +  EM++    P+V+  +++I  L   G    +  I  ++      P  
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL G    G+  E   L   M    F PN++ Y+T++  LC NG ++ A+ + Y 
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N C P++++Y+ ++ G  K G L  A  ++ +M     +P+      ++    ++ +
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGL 675

Query: 356 FHQA--------------------HSLIEKMAFENCPPNTVTF----------------N 379
             +A                    HSL+E +   +    ++ F                +
Sbjct: 676 MKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLS 735

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I+  C       A +L+ + +         +YN L+ GL+  + +  A EL +E+++ 
Sbjct: 736 PIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL 795

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   +  TY+ IL  + ++  + +  ++  +M  +G K   +T+N II    K   ++ A
Sbjct: 796 GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I L  ++   G ++P   +Y  LL G+   G +++A     +ML  G  PN A +N+L+
Sbjct: 856 INLYYQLMSEG-FSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL 913



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 170/402 (42%), Gaps = 36/402 (8%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I  NV T+ T+  ++   G + ++   L  M   G   N +++  L+   +  G   EA 
Sbjct: 132 IKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAM 191

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           D++  M  +G +P V  YS L+         +  V +  +ME     PNV +Y+  I   
Sbjct: 192 DVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVL 251

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            +AG L  A +I  +M   GC P+VV  T ++++LC       A  +  KM   +  P+ 
Sbjct: 252 GQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDR 311

Query: 376 VTFNTF-----------------------------------IKGLCGCGRVDWAMKLLDQ 400
           VT+ T                                    +  LC  GRVD A+ + D+
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           MKQ   +P   +YN L+ G L+ +R   A EL   +   G   N  T+   ++   ++G 
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
            ++A +    M  +G   D +  N ++Y   K G++  A ++   ++  G  +PD I+YT
Sbjct: 432 SLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG-ISPDNITYT 490

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++     +    EA     +M+     P+    N L+  L+
Sbjct: 491 MMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLY 532



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 39/382 (10%)

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           VG+V     ++ +  ++    N+ +F ++     + G    A      M   G + N   
Sbjct: 117 VGDVAQVFDLMQRQIIKA---NVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYT 173

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ L  +G   EA+ V   M  +   P V TYS L+  F K  +      +   M 
Sbjct: 174 YNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEME 233

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR-- 390
           + G  PNV +YT  ++VL Q     +A+ ++ KM  E C P+ VT    I+ LC  GR  
Sbjct: 234 ARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLA 293

Query: 391 ----VDWAMKLLDQ-----------------------------MKQYECLPNITTYNELL 417
               V W MK  DQ                             +K      N+ +Y   +
Sbjct: 294 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAV 353

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L +V RV EA ++  E+++ GI     +YN+++ G  +A     A +L   M I G  
Sbjct: 354 DALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            +  T  + I  + K G+   A++  + ++  G   PD+++  ++L+G+  +G +  A  
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKG-IVPDVVAGNAVLYGLAKTGRLGMAKR 472

Query: 538 YLQKMLNEGICPNFATWNVLVR 559
              ++   GI P+  T+ ++++
Sbjct: 473 VFHELKAMGISPDNITYTMMIK 494



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 139/311 (44%), Gaps = 8/311 (2%)

Query: 252 HEASDLWNRMIREGFLPNVVAYST----LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            EA +L+  + R+   P VV  +     ++  + ++G + +   V   M+      NV T
Sbjct: 82  EEALELFLSVARQ---PRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT 138

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           +  +       G L  A      M   G   N   Y  ++  L ++    +A  + + MA
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +   P   T++  +         +  + LL +M+     PN+ +Y   +  L +  R++
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA+ ++ ++E+ G + ++VT   ++  +C AG + +A  +  KM     K D +T+  ++
Sbjct: 259 EAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLL 318

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
                 G   +  ++ + ++  G +N +++SYT+ +  +C  G + EA     +M  +GI
Sbjct: 319 DKCGDSGDSRSVSEIWNALKADG-YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGI 377

Query: 548 CPNFATWNVLV 558
            P   ++N L+
Sbjct: 378 IPQQYSYNSLI 388



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 39/182 (21%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           EL+    RV  V + F+L   +++  I+ N+ T+ T+   V   G +  A   L  M   
Sbjct: 109 ELMRAHGRVGDVAQVFDL---MQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEA 165

Query: 475 GTKLDAITFNIIIY-----------------------------------AYCKQGKVNNA 499
           G  L+A T+N +IY                                   A+ K+      
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + LL  +   G   P++ SYT  +  +  +G ++EA+  L+KM  EG  P+  T  VL++
Sbjct: 226 VGLLGEMEARG-VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQ 284

Query: 560 SL 561
            L
Sbjct: 285 IL 286


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/586 (26%), Positives = 263/586 (44%), Gaps = 42/586 (7%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           D V+ L  +M   GV   E V+   I    ++  A++A+++  ++RE GLKP    YN +
Sbjct: 206 DAVR-LFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSV 264

Query: 72  LDALLAENRFS------------------------------------MINPIYSNMKRDG 95
           +D L+   R                                          ++    RDG
Sbjct: 265 VDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDG 324

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P   TY +L+K        D  YKL  +M  +G  P    +  ++  + +  Q E+A 
Sbjct: 325 VTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAI 384

Query: 156 EL-AMRFGSGVS---VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
            L  +   +GV     Y  LI+ L K HK+ EA  L  +M + G+ P+++T  +++   C
Sbjct: 385 ALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYC 444

Query: 212 DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVV 271
           + G ++ +L +  +M  +G  PN  ++T+L+KGY+      +A  L N M + G      
Sbjct: 445 EKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEY 504

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            Y+ LI+GLC    + E   +  +       P   TY+++I+GF KAG +  A  ++ +M
Sbjct: 505 TYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQM 564

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G +PN+V YT  +   C+ N    A  L+  M      P+   +N FI   C  G +
Sbjct: 565 CEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNM 624

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A+  L  + +    PN+T YN  + G   +  + EA +    + K  I  +   Y T+
Sbjct: 625 SHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTL 684

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G  + G V  A +L  +ML      D  TF  + +  C+ G ++ A +LLD +    +
Sbjct: 685 IDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMT-RLD 743

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
             P+ ++Y  L+      G +QEAF    KML+ G+ P+  T+N+ 
Sbjct: 744 VCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYNIF 789



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/558 (26%), Positives = 263/558 (47%), Gaps = 11/558 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
            +M   GV         ++ +  R   A  AL +F  +R  G     K+Y+ ++ A +  
Sbjct: 142 SRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVG 201

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                   ++  M   G++P+   Y I +  LCK    D A ++L +M   G  P   +Y
Sbjct: 202 RMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTY 261

Query: 139 TTIVSSICKLGQVEEARELA--MRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMV 192
            ++V  + K+G+++EA  L   M   +G    V +   L+ G C   +I +A  L  E V
Sbjct: 262 NSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAV 321

Query: 193 DRGIDPNVITYSTIISSLCDV-GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
             G+ P  +TY+ +I   CD  G  + +  +  QM  +G  P+ + F  ++KG L   + 
Sbjct: 322 RDGVTPTNVTYTVLIKG-CDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQW 380

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  L++ ++  G +P+V  Y  LIH L  +  + EAV++  +M+E    P++ T  +L
Sbjct: 381 EDAIALFDLVVDTG-VPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSL 439

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           + G+ + G +  A ++++ M   G  PN V YT ++K   +   F +A++L+ +M     
Sbjct: 440 LLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGV 499

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
                T+N  I GLC   RV    ++L +      +P   TYN +++G ++   +  A  
Sbjct: 500 SCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALA 559

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++ + GI  NIVTY + + G CR      A +LL  M   G   D   +N  I  +C
Sbjct: 560 MYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFC 619

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           KQG +++A+  L  +   G   P++  Y S + G  N   M EA  +   M+ + I  + 
Sbjct: 620 KQGNMSHALHFLVLLLKDG-LTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADT 678

Query: 552 ATWNVLVRSLFSNLGHLG 569
             +  L+   FS +G++ 
Sbjct: 679 EIYTTLIDG-FSKVGNVA 695



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 178/386 (46%), Gaps = 5/386 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +  ++     L  +MK  GV  S     S++  Y   G  ++ALK++  +   G
Sbjct: 404 LIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKG 463

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  ++   + +  F     + + M ++G+    +TYNIL+  LC  +RV    
Sbjct: 464 FPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVD 523

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++L    ++G  P  ++Y +I++   K G +  A    R++  +     +  Y + I+G 
Sbjct: 524 EMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGY 583

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+ +  + A  LL  M   GI P++  Y+  I+  C  GN+  +L  L  +   G  PN+
Sbjct: 584 CRTNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNV 643

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + S + GY       EAS  +  MI++    +   Y+TLI G    G++  A+ +  +
Sbjct: 644 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSE 703

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N   P+  T++AL  G  ++G++ GA ++ + M      PN V Y  ++    ++  
Sbjct: 704 MLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGK 763

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTF 381
             +A  L +KM      P+  T+N F
Sbjct: 764 LQEAFQLHDKMLSSGVVPDDTTYNIF 789


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 267/592 (45%), Gaps = 83/592 (14%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +    D    +L+++K   +      F  +I +Y + G+AE+A++ F ++++FG
Sbjct: 102 VIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFG 161

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            KP V  YN IL  ++ +  F +   +Y+ M +    PN  T+ ILL  LCKN + D A 
Sbjct: 162 CKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDAL 221

Query: 121 KLLVEMGNK-----------------------------------GCAPDAVSYTTIVSSI 145
           K+  EM  K                                   GC PD+++   ++   
Sbjct: 222 KMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGF 281

Query: 146 CKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CKLGQ++EA  L   F       G+  Y++LI+GL +  + +E      +M   GI+P+V
Sbjct: 282 CKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDV 341

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + Y+ +I   C+VG V+ +L +L  M  RG +P+ + + +L+KG+   G   +A  L   
Sbjct: 342 VLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLE 401

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           + +    P    Y+ LI G+C NG +DEA  +  QME   C P++ T++ALIDG  KAG 
Sbjct: 402 ISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE 461

Query: 321 LLGASQIW------------------------------------------NRMISNGCSP 338
           L  A  ++                                          ++M+ NGC+P
Sbjct: 462 LEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTP 521

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y C++   C+      A SL  K    + P          +     G ++ A++ L
Sbjct: 522 SSAVYKCLMTWSCRKGKLSVAFSLWLKY-LRSLPSQEDETLKLAEEHFEKGELEKAVRCL 580

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M        I  Y   L GL +  R +EA ++   +++C + +N  +   +++G+C+ 
Sbjct: 581 LEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKD 640

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           G +  A  +    L +G  L     N ++ +   Q K+ +A+ LL+R+   G
Sbjct: 641 GNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAG 692



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 227/490 (46%), Gaps = 23/490 (4%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIY 88
           S  +   V+   RR  L  +      R R F    T   +N ++D L  ++ F     I 
Sbjct: 63  SSEIVNDVMREQRRPELGFRFFIWTTRRRSFRSWVT---HNLVIDMLAKDDGFDTYWKIL 119

Query: 89  SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK- 147
             +K   ++    T+++L+ A  K+   + A +   +M + GC PD  +Y +I+  + + 
Sbjct: 120 EELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQK 179

Query: 148 ----LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
               L      + L + +    + +  L+NGLCK  K ++A  +  EM  +GI PN + Y
Sbjct: 180 EVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIY 239

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           + I+S LC     +    +L  M V GC P+  +  +LL G+   G+  EA  L     +
Sbjct: 240 TIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEK 299

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           EG++  +  YS+LI GL      DE      +M +    P+V  Y+ LI GF + G +  
Sbjct: 300 EGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDY 359

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  + N M   G SP+   Y  ++K  C   +  +A SL  +++  +C P + T+   I 
Sbjct: 360 ALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILIC 419

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE------ 437
           G+C  G +D A ++ +QM+   C P+I T+N L+DGL +   ++EA  L  ++E      
Sbjct: 420 GMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPS 479

Query: 438 -----KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
                  G    + T N    G  R     +AF++L +M+  G    +  +  ++   C+
Sbjct: 480 LFLRLSQGADRVMDTAN----GFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 535

Query: 493 QGKVNNAIQL 502
           +GK++ A  L
Sbjct: 536 KGKLSVAFSL 545



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 212/451 (47%), Gaps = 21/451 (4%)

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR- 160
           T+N+++  L K++  D  +K+L E+ N        +++ ++++  K G  E+A E   + 
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157

Query: 161 --FG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
             FG    V  YN++++ + ++     A  +  +M+    +PN  T+  +++ LC  G  
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +L +  +M  +G  PN   +T +L G     RT +   L N M   G  P+ +  + L
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + G C  G +DEA ++    E+      +  YS+LIDG  +A       +   +M   G 
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P+VV YT +++  C+  M   A +++  M      P+T  +N  IKG C  G +D A  
Sbjct: 338 EPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           L  ++ + +C P   TY  L+ G+ R   + EA ++  ++E  G   +I+T+N ++ G+C
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLC 457

Query: 457 RAGMVVEAFQLLGKM-----------LIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +AG + EA  L  KM           L +G      T N     + +  +  +A ++LD+
Sbjct: 458 KAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTAN----GFHRVDREEDAFRVLDQ 513

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           +   G   P    Y  L+   C  G +  AF
Sbjct: 514 MVKNG-CTPSSAVYKCLMTWSCRKGKLSVAF 543



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 15/311 (4%)

Query: 272 AYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
            +S LI     +G  ++AV    +M++  C P+V TY++++    +    L A  ++N+M
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           +    +PN   +  ++  LC+N     A  + ++M  +  PPNT+ +   + GLC   R 
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           D   +LL+ MK   C P+  T N LLDG  ++ ++ EAF L+   EK G  L I  Y+++
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
           + G+ RA    E  +   KM   G + D + + I+I  +C+ G V+ A+ +L+ +   G 
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG- 371

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC-PNFATWNVLV------------ 558
            +PD   Y +L+ G C+ G + +A   LQ  +++  C P   T+ +L+            
Sbjct: 372 LSPDTYCYNALIKGFCDVGLLDKA-RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEA 430

Query: 559 RSLFSNLGHLG 569
           R +F+ + +LG
Sbjct: 431 RQIFNQMENLG 441



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 2/298 (0%)

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V ++ +I  L  +   D    +  +++ ++      T+S LI  +AK+G    A + + +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M   GC P+V  Y  ++ V+ Q  +F  A ++  +M   N  PN  TF   + GLC  G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
            D A+K+ D+M Q    PN   Y  +L GL +  R  +   L+  ++  G   + +T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG 510
           +L G C+ G + EAF LL     EG  L    ++ +I    +  + +   +   ++   G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
              PD++ YT L+ G C  G +  A   L  M   G+ P+   +N L++  F ++G L
Sbjct: 337 -IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKG-FCDVGLL 392


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 224/441 (50%), Gaps = 39/441 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI +L         + LL +MK E  + +E +F+S+  +Y RV     A+++F +++E+ 
Sbjct: 56  MISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYE 115

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN-RVDGA 119
            +P+ K Y  +   L+ EN+  +    Y  M+  G+ P+V + N+L+KALCKN+  +D A
Sbjct: 116 CEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAA 175

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
            ++  EM N+GC PD  SYT                            Y  LINGLC+  
Sbjct: 176 LRIFREMPNRGCPPD--SYT----------------------------YGTLINGLCRLG 205

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           KI EA  L  EM  +   P V+TY+++I  LC   ++++++ +L +M  +G  PN+ +++
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL+ G+   G +  A +L + M+    LPN++ YSTL+HGLC  G + EAV +  +M+  
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV-------LCQ 352
              P+   Y  +I GF        A+   + M+  G SPN + ++  V++       LC 
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
            +  ++A  L   M       +  TF++ +   C  G +  A  L+D+M    C+P+  T
Sbjct: 386 EHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVT 444

Query: 413 YNELLDGLLRVNRVKEAFELV 433
           +N ++       +V+E+ ELV
Sbjct: 445 WNAVVCAFWDRRKVRESAELV 465



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 201/407 (49%), Gaps = 12/407 (2%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F      ++ +I+ L   +    A  LLC M +   +     + +I  +   V     ++
Sbjct: 46  FRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAV 105

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHG 279
            +  +M    C P+  S+ ++    L+G    + +  + R +RE G  P+V + + LI  
Sbjct: 106 RVFRKMKEYECEPSQKSYITVF-AILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164

Query: 280 LCSN-GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           LC N G+MD A+ +  +M    CPP+  TY  LI+G  + G +  A +++  M +  CSP
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSP 224

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            VV YT ++  LCQ+     A  L+E+MA +   PN  T+++ + G C  G    A++LL
Sbjct: 225 TVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D M     LPN+ TY+ L+ GL +  +++EA E++  ++  G++ +   Y  I+ G C  
Sbjct: 285 DMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDI 344

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITF-------NIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
               EA   L +M++ G   + +T+       NI++   C +   N A QL   +R  G 
Sbjct: 345 CKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRG- 402

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            + D  ++ SL+   CN G + +A   + +M+ +G  P+  TWN +V
Sbjct: 403 ISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVV 449



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 184/387 (47%), Gaps = 15/387 (3%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD---LW 258
           T+S +IS L    +   +  +L +M    CN     F S+ + Y   GR H+  D   ++
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAY---GRVHKPLDAVRVF 108

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK- 317
            +M      P+  +Y T+   L     +  A+     M E   PP+V + + LI    K 
Sbjct: 109 RKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKN 168

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           +G +  A +I+  M + GC P+   Y  ++  LC+     +A  L ++M  + C P  VT
Sbjct: 169 SGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVT 228

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + + I GLC    +D A++LL++M      PN+ TY+ L+DG  +      A EL+  + 
Sbjct: 229 YTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMV 288

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
                 N++TY+T++HG+C+ G + EA ++L +M ++G + DA  +  II  +C   K +
Sbjct: 289 SRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFH 348

Query: 498 NAIQLLDRIRGGG------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
            A   LD +  GG       W+  +  +  ++ G+C     +   +YL  M   GI  + 
Sbjct: 349 EAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLS-MRTRGISIDA 407

Query: 552 ATWNVLVRSLFSNLGHLGPVYILDDIM 578
            T++ LV + F N G L     L D M
Sbjct: 408 KTFDSLV-NYFCNKGDLHKAAHLVDEM 433



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 148/295 (50%), Gaps = 2/295 (0%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  +   +S +I  L S      A  +  +M+E  C      + ++   + +    L A
Sbjct: 45  GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDA 104

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++ +M    C P+  +Y  +  +L   N    A      M     PP+  + N  IK 
Sbjct: 105 VRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164

Query: 385 LC-GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           LC   G +D A+++  +M    C P+  TY  L++GL R+ ++ EA EL  E+E      
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSP 224

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +VTY +++HG+C++  +  A +LL +M  +G K +  T++ ++  +CK G  + A++LL
Sbjct: 225 TVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           D +       P++I+Y++L+ G+C  G +QEA   L +M  +G+ P+   +  ++
Sbjct: 285 DMMVSRRHL-PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKII 338



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 117/230 (50%), Gaps = 8/230 (3%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           +NG   +   ++ M+  L   N F  A  L+ +M  E C    +T + F+      GRV 
Sbjct: 43  TNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKC---NITEDIFLSICRAYGRVH 99

Query: 393 W---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
               A+++  +MK+YEC P+  +Y  +   L+  N++K A      + + GI  ++ + N
Sbjct: 100 KPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLN 159

Query: 450 TILHGVCR-AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
            ++  +C+ +G +  A ++  +M   G   D+ T+  +I   C+ GK+  A +L   +  
Sbjct: 160 VLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMET 219

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
               +P +++YTSL+ G+C S  +  A   L++M ++GI PN  T++ L+
Sbjct: 220 KA-CSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLM 268


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 196/363 (53%), Gaps = 1/363 (0%)

Query: 168 YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF 227
           +N ++  L K        +L  +M  RGI PN++  + +I+  C +G +  +  +  ++ 
Sbjct: 90  FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL 149

Query: 228 VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
             G NPN  +FT+L+KG  L G+ H+A +  ++++  GF  N ++Y TLI GLC  G   
Sbjct: 150 KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETR 209

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+ +  +++     PNV  YS +IDG  K  ++  A  +++ M+S G SPNVV Y+ ++
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
                      A  L  KM  EN  P+  TFN  +   C  G++ +A+KL+D+M      
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP 329

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           PNI TY+ +LD L + +RV +A  L+T+++  GI+ N+ TY  ++ G+C +G + +A  +
Sbjct: 330 PNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNI 389

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
              +L++G  +  +T+ ++ Y +CK+G  + A  LL ++   G   PD  +Y  +   + 
Sbjct: 390 FEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENG-CIPDAKTYELIKLSLF 448

Query: 528 NSG 530
             G
Sbjct: 449 KKG 451



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 205/409 (50%), Gaps = 5/409 (1%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           N+  Y+        NN VD A  L   +  +   P A+ +  I+ S+ K         L+
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 159 --MRF---GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
             M F      +   N LIN  C+   I  AF +  +++  G +PN IT++T+I  LC  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  +L    ++   G   N  S+ +L+ G    G T  A DL  R+  +   PNVV Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ST+I G+C +  +++A  +  +M      PNV TYSALI GF   G L  A  ++N+MIS
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
               P+V  +  +V V C++     A  L+++M     PPN VT+++ +  LC   RVD 
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ LL ++K     PN+ TY  L+DGL    ++++A  +  ++   G  + +VTY  + +
Sbjct: 351 AVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFY 410

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           G C+ G+  EA  LL KM   G   DA T+ +I  +  K+G+ + A +L
Sbjct: 411 GFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKL 459



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 195/387 (50%), Gaps = 6/387 (1%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           +R+    P ++ +N IL +L+    +  +  +   M+  G++PN+   NIL+   C+   
Sbjct: 79  LRQNPTPPAIE-FNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGL 137

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNA 170
           +  A+ +  ++   G  P+ +++TT++  +C  GQ+ +A     + +A+ F      Y  
Sbjct: 138 IPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGT 197

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           LI+GLCK  +   A  LL  +  + + PNV+ YSTII  +C   +V  +  +  +M  +G
Sbjct: 198 LIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG 257

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
            +PN+ ++++L+ G+   G+  +A DL+N+MI E   P+V  ++ L+   C +G +  A+
Sbjct: 258 ISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYAL 317

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +  +M +   PPN+ TYS+++D   K   +  A  +  ++   G  PN+  YT ++  L
Sbjct: 318 KLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGL 377

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
           C +     A ++ E +  +      VT+     G C  G  D A  LL +M++  C+P+ 
Sbjct: 378 CTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDA 437

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIE 437
            TY  +   L +      A +L  E E
Sbjct: 438 KTYELIKLSLFKKGENDMAEKLHRECE 464



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 176/328 (53%), Gaps = 1/328 (0%)

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           N+  ++S    +       +A  L+N ++R+   P  + ++ ++  L  +      + +S
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +ME     PN+   + LI+ F + G +  A  ++ +++  G +PN + +T ++K LC  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
              HQA +  +K+       N +++ T I GLC  G    A+ LL ++      PN+  Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLI 473
           + ++DG+ +   V +AF+L +E+   GI  N+VTY+ ++ G    G + +A  L  KM+ 
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 474 EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQ 533
           E  K D  TFNI++  +CK GK++ A++L+D +   G+  P+I++Y+S+L  +C +  + 
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP-PNIVTYSSILDALCKTHRVD 349

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +A   L K+ ++GI PN  T+ +L+  L
Sbjct: 350 KAVALLTKLKDQGIRPNMHTYTILIDGL 377



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 178/359 (49%), Gaps = 1/359 (0%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N+I YS+  ++     +V+ ++ +   +  +   P    F  +L   +     H    L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            +M   G  PN+V  + LI+  C  G +  A SV  ++ +    PN  T++ LI G    
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A    +++++ G   N ++Y  ++  LC+      A  L+ ++  +   PN V +
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           +T I G+C    V+ A  L  +M      PN+ TY+ L+ G   V ++K+A +L  ++  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             I+ ++ T+N ++   C++G +  A +L+ +M   G   + +T++ I+ A CK  +V+ 
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDK 350

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
           A+ LL +++  G   P++ +YT L+ G+C SG +++A    + +L +G      T+ V+
Sbjct: 351 AVALLTKLKDQG-IRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVM 408



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 5/335 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V YL ++M+  G+  +      +IN + ++GL   A  +F +I + G  P    +  ++ 
Sbjct: 106 VLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIK 165

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L  + +       +  +   G + N  +Y  L+  LCK      A  LL  +  K   P
Sbjct: 166 GLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQP 225

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLL 188
           + V Y+TI+  +CK   V +A +L     S      V  Y+ALI+G     K+++A  L 
Sbjct: 226 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLF 285

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M+   I P+V T++ ++   C  G +  +L ++ +M  RG  PNI +++S+L      
Sbjct: 286 NKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKT 345

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            R  +A  L  ++  +G  PN+  Y+ LI GLC++G +++A ++   +        V TY
Sbjct: 346 HRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTY 405

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
             +  GF K G    AS + ++M  NGC P+   Y
Sbjct: 406 IVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 132/268 (49%), Gaps = 5/268 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+   +VG    AL +  R+    ++P V +Y+ I+D +  +   +    +YS M   
Sbjct: 197 TLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK 256

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ PNV TY+ L+       ++  A  L  +M ++   PD  ++  +V   CK G++  A
Sbjct: 257 GISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYA 316

Query: 155 RELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +L            +  Y+++++ LCK H++++A  LL ++ D+GI PN+ TY+ +I  
Sbjct: 317 LKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDG 376

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC  G +E +  I   + V+G +  + ++  +  G+   G   EAS L ++M   G +P+
Sbjct: 377 LCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPD 436

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQME 297
              Y  +   L   G  D A  +  + E
Sbjct: 437 AKTYELIKLSLFKKGENDMAEKLHRECE 464



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 5/203 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +G+S +   + ++I+ +  VG  + A+ +F ++    +KP V  +N ++D   
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFC 308

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              + S    +   M   G  PN+ TY+ +L ALCK +RVD A  LL ++ ++G  P+  
Sbjct: 309 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMH 368

Query: 137 SYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++  +C  G++E+AR      L   +   V  Y  +  G CK+   +EA  LL +M
Sbjct: 369 TYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKM 428

Query: 192 VDRGIDPNVITYSTIISSLCDVG 214
            + G  P+  TY  I  SL   G
Sbjct: 429 EENGCIPDAKTYELIKLSLFKKG 451



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           N++ Y+        NN    A SL   +  +N  P  + FN  +  L         + L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M+     PN+   N L++   ++  +  AF +  +I K G   N +T+ T++ G+C  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G + +A     K++  G + + I++  +I   CK G+   A+ LL R+  G    P+++ 
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV-DGKLVQPNVVM 229

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           Y++++ G+C    + +AF    +M+++GI PN  T++ L+   F+
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 274



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 69/141 (48%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+ +M   G   +   + S++++  +    ++A+ +  ++++ G++P +  Y  ++D L 
Sbjct: 319 LVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLC 378

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              +      I+ ++   G +  V TY ++    CK    D A  LL +M   GC PDA 
Sbjct: 379 TSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAK 438

Query: 137 SYTTIVSSICKLGQVEEAREL 157
           +Y  I  S+ K G+ + A +L
Sbjct: 439 TYELIKLSLFKKGENDMAEKL 459


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 231/471 (49%), Gaps = 10/471 (2%)

Query: 105 ILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-- 161
           ++ KA  K +  + A  L   M  +  C     S+ ++++ I + G    A E       
Sbjct: 130 VIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIG 189

Query: 162 GSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
             GVS+      +N +I  +CK   +++A  +  +M  R  +P+V TY T++  LC    
Sbjct: 190 AKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADR 249

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           ++ ++ +L +M + GC P+  +F  L+ G    G    A+ L + M  +G +PN V Y+T
Sbjct: 250 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNT 309

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LIHGLC  G +++A+S+  +M  + C PNV TY  +I+G  K G  L  + +   M   G
Sbjct: 310 LIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERG 369

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
              N   Y+ ++  L +     +A  L ++M  +    NT+ ++  I GLC  G+ D A+
Sbjct: 370 YCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAV 429

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           ++L +M    C PN  T + L+ G         A E+  ++ K     N V Y+ ++HG+
Sbjct: 430 EVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGL 489

Query: 456 CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEWNP 514
           C+ G V EA  +  +ML +G K D + ++ +I      G V +A+QL + +   G +  P
Sbjct: 490 CKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQP 549

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           D+++Y  LL  +C    +  A   L  ML+ G  P+  T  + +R L   L
Sbjct: 550 DVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKL 600



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/406 (32%), Positives = 206/406 (50%), Gaps = 44/406 (10%)

Query: 24  EGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           +GVS S  V  F  VI +  +VGL + A+++F  +     +P V  Y  ++D L   +R 
Sbjct: 191 KGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRI 250

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
                +   M+ DG  P+  T+N+L+  LCK   +  A KL+  M  KGC P+ V+Y T+
Sbjct: 251 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTL 310

Query: 142 VSSICKLGQVEEARELAMR------------FGSGVS----------------------- 166
           +  +C  G++E+A  L  R            +G+ ++                       
Sbjct: 311 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGY 370

Query: 167 -----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                VY+ LI+GL KE K +EA  L  EM  +G + N I YS +I  LC  G  + ++ 
Sbjct: 371 CVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVE 430

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M  +GC PN ++ +SL+KG+   G +H A ++W  M +  F  N V YS LIHGLC
Sbjct: 431 VLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLC 490

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG--CSPN 339
            +G + EA+ V  QM    C P+V  YS++I+G + AG +  A Q++N M+  G    P+
Sbjct: 491 KDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPD 550

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           VV Y  ++  LC+ +   +A  L+  M    C P+ VT   F++ L
Sbjct: 551 VVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 217/448 (48%), Gaps = 31/448 (6%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   ID    LL +M+++G   S   F  +IN   + G   +A K+   +   G
Sbjct: 240 LMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKG 299

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR-VDGA 119
             P    YN ++  L  + +      +   M      PNV TY  ++  L K  R +DGA
Sbjct: 300 CIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGA 359

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALING 174
             +L  M  +G   +   Y+T++S + K G+ +EA    +E+ ++ +     VY+A+I+G
Sbjct: 360 C-VLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDG 418

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC++ K ++A  +L EM ++G  PN  T S+++    + GN   ++ +   M       N
Sbjct: 419 LCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQN 478

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
              ++ L+ G    G+  EA  +W +M+ +G  P+VVAYS++I+GL   G +++A+ +  
Sbjct: 479 EVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYN 538

Query: 295 QM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
           +M  +     P+V TY+ L++   K  ++  A  + N M+  GC P++V  T  +++   
Sbjct: 539 EMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRM--- 595

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTF-NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNIT 411
                    L EK+   + P +   F +  +  L    RV  A K+++ M Q    P  +
Sbjct: 596 ---------LREKL---DPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHS 643

Query: 412 TYNELLDGLLRVNRVKEAFELVTEIEKC 439
           T+  +++ L +  +V+        I+KC
Sbjct: 644 TWARVVENLCKPKKVQAV------IQKC 665


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/466 (25%), Positives = 235/466 (50%), Gaps = 6/466 (1%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--- 154
           P+ F+YN+++  L ++ +   A K+  EM + G  P+ ++Y T++    K G +E     
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 155 RELAMRFGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
           R+  +  G    +  YN L++GLC+  +++E   L+ EM    + P+  TYS +   L  
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G   T L +  +   +G     ++ + LL G    G+  +A  +   ++  G +P  V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+TLI+G C    +  A  +  QM+     P+  TY+ALI+G  K   +  A  +   M 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
            +G  P+V  +  ++          +  +++  M  +    + ++F + +K  C  G++ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A+ +LD M   +  PN   YN ++D  +     ++AF LV +++  G+  +IVTYN +L
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
            G+CR+  + EA +L+  +  +G + D +++N II A C +G  + A++LL  +   G  
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG-I 432

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            P + +Y +L+  + ++G + +     Q+ML++ + P+ + + ++V
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMV 478



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 226/462 (48%), Gaps = 5/462 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           VI    R G    ALK+F  + + G+ P    YN ++D  +          +   M  DG
Sbjct: 22  VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 81

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +PN+ TYN+LL  LC+  R+D    L+ EM +    PD  +Y+ +   + + G+     
Sbjct: 82  PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 141

Query: 156 EL---AMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L   +++ G  +  Y  + L+NGLCK+ K+ +A  +L  +V  G+ P  + Y+T+I+  
Sbjct: 142 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 201

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C V ++  +  I  QM  R   P+  ++ +L+ G        +A DL   M + G  P+V
Sbjct: 202 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSV 261

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             ++TLI    + G +++  +V   M++     +V ++ +++  F K G +  A  I + 
Sbjct: 262 ETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDD 321

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           MI    +PN   Y  ++    ++    QA  L+EKM       + VT+N  +KGLC   +
Sbjct: 322 MIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQ 381

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNT 450
           +D A +L+  ++     P++ +YN ++          +A EL+ E+ K GI+  + TY+T
Sbjct: 382 IDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHT 441

Query: 451 ILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           ++  +  AG V +   L  +ML +  +  +  + I++ AY +
Sbjct: 442 LVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVR 483



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 202/399 (50%), Gaps = 5/399 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++I+ + + G  E   ++  ++   G KP +  YN +L  L    R      +   M   
Sbjct: 56  TMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH 115

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            M P+ FTY+IL   L +         L  E   KG    A + + +++ +CK G+V +A
Sbjct: 116 SMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKA 175

Query: 155 RE-LAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            + L M   +G+     +YN LING C+   +  AF +  +M  R I P+ ITY+ +I+ 
Sbjct: 176 EQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 235

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           LC +  V  +  ++ +M   G +P++ +F +L+  Y   G+  +   + + M ++G   +
Sbjct: 236 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 295

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V+++ +++   C NG + EAV++   M      PN   Y+++ID + ++G+   A  +  
Sbjct: 296 VISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVE 355

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M ++G S ++V Y  ++K LC+++   +A  LI  +  +   P+ V++NT I   C  G
Sbjct: 356 KMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKG 415

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
             D A++LL +M +Y   P + TY+ L+  L    RV +
Sbjct: 416 DTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 226/464 (48%), Gaps = 18/464 (3%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
           RR+G +E A             P    YN ++  L    + S    ++  M   G+ PN 
Sbjct: 3   RRMGRSEGAPP-----------PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNW 51

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----E 156
            TYN ++    K   ++  ++L  +M + G  P+ V+Y  ++S +C+ G+++E R    E
Sbjct: 52  ITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDE 111

Query: 157 LAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +A    F  G + Y+ L +GL +  +      L  E + +G+     T S +++ LC  G
Sbjct: 112 MASHSMFPDGFT-YSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 170

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            V  +  +L  +   G  P    + +L+ GY        A  ++ +M      P+ + Y+
Sbjct: 171 KVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 230

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI+GLC    + +A  +  +ME++   P+V T++ LID +  AG L     + + M   
Sbjct: 231 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 290

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G   +V+++  +VK  C+N    +A ++++ M +++  PN   +N+ I      G  + A
Sbjct: 291 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 350

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             L+++MK      +I TYN LL GL R +++ EA EL+  +   G++ ++V+YNTI+  
Sbjct: 351 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 410

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            C  G   +A +LL +M   G +    T++ ++ A    G+V++
Sbjct: 411 CCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/398 (21%), Positives = 174/398 (43%), Gaps = 5/398 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D  + L+ +M    +      +  + +   R G +   L +F    + G+       + 
Sbjct: 102 MDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSI 161

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L+ L  + + +    +   +   G+ P    YN L+   C+   + GA+ +  +M ++ 
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAF 185
             PD ++Y  +++ +CKL  V +A +L M          V  +N LI+      ++E+ F
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 281

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            +L +M  +GI  +VI++ +++ + C  G +  ++ IL  M  +   PN   + S++  Y
Sbjct: 282 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  G T +A  L  +M   G   ++V Y+ L+ GLC +  +DEA  + Y +      P+V
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            +Y+ +I      G+   A ++   M   G  P +  Y  +V  L      H    L ++
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
           M  +N  P++  +   +     C        L  +M +
Sbjct: 462 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSE 499



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 158/297 (53%), Gaps = 9/297 (3%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ G   + +QMK   +      + ++IN   ++ +  +A  +   + + G+ P+V+ +N
Sbjct: 206 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 265

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++DA     +      + S+M++ G++ +V ++  ++KA CKN ++  A  +L +M  K
Sbjct: 266 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 325

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEA 184
             AP+A  Y +I+ +  + G  E+A  L  +   SGVS     YN L+ GLC+  +I+EA
Sbjct: 326 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEA 385

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L+  + ++G+ P+V++Y+TIIS+ C+ G+ + +L +L +M   G  P + ++ +L+  
Sbjct: 386 EELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSA 445

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL--CSNGSMDEAVSVSYQMEEN 299
               GR H+   L+ +M+ +   P+   Y  ++     C N S  +  S+  +M E 
Sbjct: 446 LASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDS--KVASLKKEMSEK 500



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 139/284 (48%), Gaps = 2/284 (0%)

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           E + PP+  +Y+ +I G  ++G    A ++++ M+  G  PN + Y  M+    +     
Sbjct: 9   EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
               L ++M  +   PN VT+N  + GLC  GR+D    L+D+M  +   P+  TY+ L 
Sbjct: 69  AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 128

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           DGL R    +    L  E  K G+ L   T + +L+G+C+ G V +A Q+L  ++  G  
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 188

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
              + +N +I  YC+   +  A  + ++++      PD I+Y +L+ G+C    + +A  
Sbjct: 189 PTTVIYNTLINGYCQVRDLRGAFCIFEQMK-SRHIRPDHITYNALINGLCKLEMVTKAED 247

Query: 538 YLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            + +M   G+ P+  T+N L+ + +   G L   + +   M  K
Sbjct: 248 LVMEMEKSGVDPSVETFNTLIDA-YGTAGQLEKCFTVLSDMQQK 290



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/329 (21%), Positives = 159/329 (48%), Gaps = 5/329 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + +L+ +   G+  +  ++ ++IN Y +V     A  +F +++   ++P    YN +++
Sbjct: 175 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 234

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
            L      +    +   M++ G++P+V T+N L+ A     +++  + +L +M  KG   
Sbjct: 235 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 294

Query: 134 DAVSYTTIVSSICKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           D +S+ ++V + CK G++ EA  +              VYN++I+   +    E+AF L+
Sbjct: 295 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 354

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            +M + G+  +++TY+ ++  LC    ++ +  ++  +  +G  P++ S+ +++      
Sbjct: 355 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 414

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G T +A +L   M + G  P +  Y TL+  L S G + +   +  QM   +  P+ + Y
Sbjct: 415 GDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 474

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCS 337
             ++D + +  N    + +   M   G +
Sbjct: 475 GIMVDAYVRCENDSKVASLKKEMSEKGIA 503



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 30/266 (11%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+  G   +++    +L  M+ +G+      F SV+ ++ + G   +A+ +   +    
Sbjct: 267 LIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKD 326

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P  ++YN I+DA +          +   MK  G+  ++ TYN+LLK LC+++++D A 
Sbjct: 327 VAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAE 386

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
           +L+  + N+G  PD VSY TI+S+ C  G  ++A E                        
Sbjct: 387 ELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE------------------------ 422

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                 LL EM   GI P + TY T++S+L   G V     +  QM  +   P+   +  
Sbjct: 423 ------LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGI 476

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGF 266
           ++  Y+      + + L   M  +G 
Sbjct: 477 MVDAYVRCENDSKVASLKKEMSEKGI 502



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 67/134 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L    +ID  + L+  ++ +G+      + ++I++    G  ++AL++   + ++G
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PT++ Y+ ++ AL +  R   +  +Y  M    +EP+   Y I++ A  +        
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVA 491

Query: 121 KLLVEMGNKGCAPD 134
            L  EM  KG A D
Sbjct: 492 SLKKEMSEKGIAFD 505


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 207/395 (52%), Gaps = 14/395 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+ +L    +    + L+ +MK+E    SE + +S+   Y RV     +L++F+++++F 
Sbjct: 57  MVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFD 116

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN-RVDGA 119
             P+ K Y  +L  L+ EN+ ++    Y NM+  G+ P V + N+L+KALC+N+  VD  
Sbjct: 117 CDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAG 176

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALING 174
            K+ +EM  +GC PD+ +Y T++S +C+ G+++EA++L            V  Y +LING
Sbjct: 177 LKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC    ++EA   L EM  +GI+PNV TYS+++  LC  G    ++ +   M  RGC PN
Sbjct: 237 LCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+L+ G     +  EA +L +RM  +G  P+   Y  +I G C+     EA +   
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLD 356

Query: 295 QMEENSCPPN-------VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
           +M      PN       V T + ++ G   A     A  ++  M S G S  V     +V
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLV 415

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
           K LC+   F +A  L++++  + C P+  T+   I
Sbjct: 416 KCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 198/404 (49%), Gaps = 24/404 (5%)

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK-LGQVEEARELAM 159
           F Y +L   L   N+   A  L+V M  + C    V    I+ SIC+  G+V    +   
Sbjct: 54  FGYMVL--RLVSANKFKAAEDLIVRMKIENC----VVSEDILLSICRGYGRVHRPFDSLR 107

Query: 160 RF--------GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLC 211
            F              Y  ++  L +E+++  AF     M + G+ P V + + +I +LC
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167

Query: 212 -DVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
            + G V+  L I  +M  RGC+P+ +++ +L+ G    GR  EA  L+  M+ +   P V
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V Y++LI+GLC + ++DEA+    +M+     PNV TYS+L+DG  K G  L A +++  
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M++ GC PN+V YT ++  LC+     +A  L+++M  +   P+   +   I G C   +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347

Query: 391 VDWAMKLLDQMKQYECLPN-------ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
              A   LD+M      PN       + T NE++ GL   N    AF L   +   GI +
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISV 406

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            + T  +++  +C+ G   +A QL+ +++ +G      T+ ++I
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 182/389 (46%), Gaps = 14/389 (3%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD---LW 258
           ++  ++  L      + +  ++ +M +  C  +     S+ +GY   GR H   D   ++
Sbjct: 53  SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGY---GRVHRPFDSLRVF 109

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK- 317
           ++M      P+  AY T++  L     ++ A      M E   PP V + + LI    + 
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G +    +I+  M   GC P+   Y  ++  LC+     +A  L  +M  ++C P  VT
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + + I GLCG   VD AM+ L++MK     PN+ TY+ L+DGL +  R  +A EL   + 
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             G + N+VTY T++ G+C+   + EA +LL +M ++G K DA  +  +I  +C   K  
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349

Query: 498 NAIQLLDRIRGGG------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
            A   LD +  GG       WN  + +   ++ G+C +   +   +YL  M + GI    
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLS-MRSRGISVEV 408

Query: 552 ATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            T   LV+ L         V ++D+I+ +
Sbjct: 409 ETLESLVKCLCKKGEFQKAVQLVDEIVTD 437



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 154/332 (46%), Gaps = 37/332 (11%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G++ +  ++  ++  L S      A  +  +M+  +C  +     ++  G+ +      +
Sbjct: 46  GYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++++M    C P+  AY  ++ +L + N  + A    + M     PP   + N  IK 
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165

Query: 385 LC-------------------GC-----------------GRVDWAMKLLDQMKQYECLP 408
           LC                   GC                 GR+D A KL  +M + +C P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            + TY  L++GL     V EA   + E++  GI+ N+ TY++++ G+C+ G  ++A +L 
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M+  G + + +T+  +I   CK+ K+  A++LLDR+   G   PD   Y  ++ G C 
Sbjct: 286 EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG-LKPDAGLYGKVISGFCA 344

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
               +EA  +L +M+  GI PN  TWN+ V++
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVKT 376



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 46/296 (15%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +  +M   G       + ++I+   R G  ++A K+F  + E    PTV  Y  
Sbjct: 173 VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++ L               MK  G+EPNVFTY+ L+  LCK+ R   A +L   M  +G
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
           C P+ V+YTT+++ +CK  +++EA EL  R           +Y  +I+G C   K  EA 
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352

Query: 186 WLLCEMVDRGIDPNVITYS----------------------------------------- 204
             L EM+  GI PN +T++                                         
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLE 412

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           +++  LC  G  + ++ ++ ++   GC P+  ++  L+   L      EASD   R
Sbjct: 413 SLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLR 468



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 128/253 (50%), Gaps = 10/253 (3%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC-GCGRV 391
           +NG   +  ++  MV  L   N F  A  LI +M  ENC    V     +  +C G GRV
Sbjct: 44  ANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENC----VVSEDILLSICRGYGRV 99

Query: 392 DW---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
                ++++  +MK ++C P+   Y  +L  L+  N++  AF+    + + G+   + + 
Sbjct: 100 HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASL 159

Query: 449 NTILHGVCRAGMVVEA-FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           N ++  +CR    V+A  ++  +M   G   D+ T+  +I   C+ G+++ A +L   + 
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
              +  P +++YTSL+ G+C S  + EA  YL++M ++GI PN  T++ L+  L  +   
Sbjct: 220 -EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278

Query: 568 LGPVYILDDIMAN 580
           L  + + + +MA 
Sbjct: 279 LQAMELFEMMMAR 291



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 8/167 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ +I     LL +M ++G+    G++  VI+ +  +    +A      +   G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362

Query: 61  LKPT-------VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN 113
           + P        VK  N ++  L A N  S    +Y +M+  G+   V T   L+K LCK 
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
                A +L+ E+   GC P   ++  ++        V EA +  +R
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLR 468


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/421 (31%), Positives = 215/421 (51%), Gaps = 8/421 (1%)

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G+ PN  T N ++K   +   V+ A  L  EM  +G  PD++SY  +V   CK+G 
Sbjct: 161 MHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGN 220

Query: 151 VEEARE-LAMRFGSGVSVYNA----LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           + EA + L++    G  V NA    +I+    +     A W    +VD G++PN+I ++ 
Sbjct: 221 ILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTC 280

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR-E 264
           +I  LC  G+++ +  +L +M  +G  PN+++ TSL+ G    G T +A  L+ +++R E
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSE 340

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
              PNV+ Y+ +I G C    ++ A  +  +M+E    PN  TY+ LIDG  KAGN   A
Sbjct: 341 NHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERA 400

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIK 383
             + N M S G SPN+  Y  +V  LC+     +A+ ++E   F+N   P+  T+N  + 
Sbjct: 401 YDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLED-GFQNGLKPDKFTYNILMS 459

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
             C    +  A+ L ++M +    P+I +Y  L+    R NR+KE+     E  + GI  
Sbjct: 460 EHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIP 519

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
              TY +++ G CR G +  A +   ++   G   D+IT+  II   CKQ K + A  L 
Sbjct: 520 TNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLY 579

Query: 504 D 504
           D
Sbjct: 580 D 580



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 224/458 (48%), Gaps = 34/458 (7%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           ++++  +  R+  A ++++EM N+G  P+  +   I+    ++G VE A           
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAE---------- 190

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
                                L  EM  RG+ P+ I+Y  ++   C +GN+  +   L  
Sbjct: 191 --------------------LLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSV 230

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M  RG   +  +FT ++  +   G T  A   + R++  G  PN++ ++ +I GLC  GS
Sbjct: 231 MLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGS 290

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI-SNGCSPNVVAYT 344
           + +A  +  +M      PNV T+++LIDG  K G    A +++ +++ S    PNV+ YT
Sbjct: 291 IKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYT 350

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            M+   C+ +  ++A  L+ +M  +   PNT T+ T I G C  G  + A  L++ M   
Sbjct: 351 AMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSE 410

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+ TYN +++GL +  RV+EA++++ +  + G++ +  TYN ++   C+   + +A
Sbjct: 411 GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQA 470

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEWNPDIISYTSLL 523
             L  KML  G + D  ++  +I  +C++ ++  +    +  +R G    P   +YTS++
Sbjct: 471 LALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIG--IIPTNKTYTSMI 528

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            G C  G +  A  +  ++ + G  P+  T+  ++  L
Sbjct: 529 CGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGL 566



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 201/393 (51%), Gaps = 2/393 (0%)

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
           V   ++    +  +++EA  ++ EM ++G+ PN  T + II    ++G VE +  +  +M
Sbjct: 137 VMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEM 196

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
            VRG  P+  S+  ++  Y   G   EA    + M+  GF+ +   ++ +I      G  
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYT 256

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
             A+    ++ +    PN+  ++ +I+G  K G++  A ++   M+  G  PNV  +T +
Sbjct: 257 TRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 316

Query: 347 VKVLCQNNMFHQAHSLIEKMA-FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +  LC+     +A  L  K+   EN  PN +T+   I G C   +++ A  LL +MK+  
Sbjct: 317 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQG 376

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +PN  TY  L+DG  +    + A++L+  +   G   N+ TYN I++G+C+ G V EA+
Sbjct: 377 LVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAY 436

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           ++L      G K D  T+NI++  +CKQ  +  A+ L +++   G   PDI SYT+L+  
Sbjct: 437 KMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIG-IQPDIHSYTTLIAV 495

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            C    M+E+ ++ ++ +  GI P   T+  ++
Sbjct: 496 FCRENRMKESEMFFEEAVRIGIIPTNKTYTSMI 528



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 212/464 (45%), Gaps = 8/464 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++ S+  VG  ++A++M   +   GL P  +  N I+              ++  M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           ++P+  +Y +++   CK   +  A K L  M  +G   D  ++T I+S     G    A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 155 ----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
               R + M     +  +  +I GLCK   I++AF +L EMV +G  PNV T++++I  L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 211 CDVGNVETSLGILGQMFVRGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           C  G  E +  +  ++ VR  N  PN+ ++T+++ GY    + + A  L +RM  +G +P
Sbjct: 321 CKKGWTEKAFRLFLKL-VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVP 379

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           N   Y+TLI G C  G+ + A  +   M      PN+ TY+A+++G  K G +  A ++ 
Sbjct: 380 NTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKML 439

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
                NG  P+   Y  ++   C+     QA +L  KM      P+  ++ T I   C  
Sbjct: 440 EDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRE 499

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            R+  +    ++  +   +P   TY  ++ G  R   +  A +    +   G   + +TY
Sbjct: 500 NRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITY 559

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             I+ G+C+     EA  L   M+ +G     +T   + Y YCK
Sbjct: 560 GAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 127/271 (46%), Gaps = 1/271 (0%)

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           +++ F++ G L  A ++   M + G  PN      ++KV  +  +   A  L E+M    
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P+++++   +   C  G +  A K L  M +   + +  T+  ++           A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
                +   G++ N++ +  ++ G+C+ G + +AF++L +M+ +G K +  T   +I   
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK+G    A +L  ++       P++++YT+++ G C    +  A + L +M  +G+ PN
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 551 FATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             T+  L+       G+    Y L ++M+++
Sbjct: 381 TNTYTTLIDG-HCKAGNFERAYDLMNLMSSE 410


>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 607

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/550 (27%), Positives = 261/550 (47%), Gaps = 12/550 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M  EG +     + +VI++  + G  + A+     +   G+ P  + Y   ++A  
Sbjct: 55  LLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACA 114

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R+ +   +   M    + PNV  YN  + +  K  + + A  L+ EM   G APD +
Sbjct: 115 RGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVI 174

Query: 137 SYTTIVSSICKLGQVEEAREL--AMRFGSGVS----VYNALINGLCKEHKIEEAFWLLCE 190
           SY++ +S+  + G+ EEA EL   MR  SGV+     Y + I       + +EA  LL +
Sbjct: 175 SYSSAISACGRGGRWEEALELFEDMRT-SGVAPDVITYGSAIAACANGGRWKEAVSLLRK 233

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           +   G+ PNVI+YS++I++    G  + +L +L +M      PNI ++ + +     GGR
Sbjct: 234 IPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGR 293

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA DL   M   G  P+VV+YS++I          EA+ +  +M      PN  +Y++
Sbjct: 294 WKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNS 353

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
            ID  AK G    A  +   M + G +  V+ Y   +    +   + +A +L+ +M    
Sbjct: 354 AIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVG 413

Query: 371 CPPNTVTFNTFIKGLCGCGRVDW--AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
                 ++++ I   CG G + W  A +LL +M      PN   YN  +D   R ++ +E
Sbjct: 414 LHTTVFSYSSAIDA-CGKGNL-WIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEE 471

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A +L+ E+   G+  ++ +Y++ +    +     EA  +L +M   G   D I +N  I 
Sbjct: 472 AVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAID 531

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
           A  K G+   A+ LL  +R  G   P+IISY+S +      G  +E    L++M   G+ 
Sbjct: 532 ACSKGGRWKMAVALLGEMRAAGL-TPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVV 590

Query: 549 PNFATWNVLV 558
           P+  T++ L+
Sbjct: 591 PDVITYHALM 600



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 244/516 (47%), Gaps = 12/516 (2%)

Query: 16  YLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL 75
           + L +M  +G++     + + IN+  R G  + AL +   +    + P V IYN  +++ 
Sbjct: 89  FFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSC 148

Query: 76  LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDA 135
               ++ +   +   M   G+ P+V +Y+  + A  +  R + A +L  +M   G APD 
Sbjct: 149 AKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDV 208

Query: 136 VSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCE 190
           ++Y + +++    G+ +EA  L  +  +      V  Y+++I    KE + + A  LL E
Sbjct: 209 ITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLRE 268

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M    + PN+ITY+  I +    G  + ++ +L +M   G  P++ S++S++     G R
Sbjct: 269 MKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDR 328

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA D+   M   G  PN ++Y++ I      G   EA  +  +M        V  Y++
Sbjct: 329 WKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNS 388

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
            I   AK      A  +   M + G    V +Y+  +    + N++ +A  L+ +MA   
Sbjct: 389 AIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVG 448

Query: 371 CPPNTVTFNTFIKGLCGCGRVD-W--AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
             PN V +N+ I     CGR D W  A+ LL +M      P++ +Y+  +    + ++ K
Sbjct: 449 LAPNEVCYNSAID---ACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWK 505

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA  ++ E+   G+  +++ YN+ +    + G    A  LLG+M   G   + I+++  I
Sbjct: 506 EALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAI 565

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
            A  + G+    I LL+ +RG G   PD+I+Y +L+
Sbjct: 566 DACVRGGQWKEGIALLEEMRGSGV-VPDVITYHALM 600



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 207/449 (46%), Gaps = 14/449 (3%)

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGS-GVSVYNA 170
           VDG  KL       G   D  SY   +++  + GQ E+A    RE+     +  +S Y+A
Sbjct: 20  VDGMKKL------PGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSA 73

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           +I+   K  + + A + L EM  +GI P+  +Y   I++    G  + +L +L +M  R 
Sbjct: 74  VIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARD 133

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             PN+  + S +      G+   A  L   M   G  P+V++YS+ I      G  +EA+
Sbjct: 134 VTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEAL 193

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
            +   M  +   P+V TY + I   A  G    A  +  ++ + G +PNV++Y+ ++   
Sbjct: 194 ELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITAC 253

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +   +  A  L+ +M      PN +T+N  I      GR   A+ LL +M      P++
Sbjct: 254 AKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDV 313

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            +Y+ ++D   + +R KEA +++ E+   G+  N ++YN+ +    + G   EA  LL +
Sbjct: 314 VSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLRE 373

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSG 530
           M   G     I +N  I A  K  +   A+ LL  +   G  +  + SY+S +   C  G
Sbjct: 374 MPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGL-HTTVFSYSSAI-DACGKG 431

Query: 531 GMQ-EAFIYLQKMLNEGICPNFATWNVLV 558
            +  +A   L++M   G+ PN   +N  +
Sbjct: 432 NLWIKAKELLREMATVGLAPNEVCYNSAI 460


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 243/465 (52%), Gaps = 12/465 (2%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD-GMEPNV 100
           +  +  +AL +FY+++    +PT   YN I+  L+ E     ++ +Y+ M  +    P+ 
Sbjct: 165 KAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDT 224

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--- 157
            TY+ L+ A  K NR D A +L  EM   G  P A  YTT++    K+G+VEEA  L   
Sbjct: 225 VTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKE 284

Query: 158 --AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
             A R    V  Y  LI GL K  ++E+A+     M+  G  P+V+  + +I+ L    +
Sbjct: 285 MRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNH 344

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           +  ++ +  +M +  C PN+ ++ +++K  +       EAS  + RM ++G +P+   YS
Sbjct: 345 LRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYS 404

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI G C    +++A+ +  +M+E   PP    Y +LI+    A     A++++  +  N
Sbjct: 405 ILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKEN 464

Query: 335 -GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            GCS   V Y  M+K   +    ++A +L  +M    C P+   +N  + G+    R+D 
Sbjct: 465 CGCSSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDE 523

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A  L   M++  C P+I ++N +L+GL R    K A E+ T+++   I+ ++V++NTIL 
Sbjct: 524 AFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTILG 583

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            + RAG+  EA +L+ +M  +G + D IT++ I+ A    GKV++
Sbjct: 584 CLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAV---GKVDD 625



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 224/463 (48%), Gaps = 43/463 (9%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGV 165
           +++ L K   V+ A  +  ++  + C P A +Y +I+  + + G  E+  EL     S V
Sbjct: 159 IVRILGKAKMVNRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEV 218

Query: 166 S------VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+   K ++ + A  L  EM + G+ P    Y+T++     VG VE +
Sbjct: 219 HCFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEA 278

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           LG++ +M  R C   + ++T L++G    GR  +A   +  M+++G  P+VV  + LI+ 
Sbjct: 279 LGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINI 338

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L  +  + +A+ +  +M+  +C PNV TY+ +I    +A   L  +  W  RM  +G  P
Sbjct: 339 LGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVP 398

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL------------- 385
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L             
Sbjct: 399 SSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELF 458

Query: 386 ------CGC----------------GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
                 CGC                GR++ A+ L ++MK+  C P++  YN L+ G++R 
Sbjct: 459 QELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRA 518

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            R+ EAF L   +E+ G   +I ++N IL+G+ R G    A ++  KM     K D ++F
Sbjct: 519 ERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSF 578

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           N I+    + G    A +L+  +   G +  D+I+Y+S+L  +
Sbjct: 579 NTILGCLSRAGLFEEAAKLMQEMSSKG-FQYDLITYSSILEAV 620



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/477 (25%), Positives = 216/477 (45%), Gaps = 14/477 (2%)

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           KR   E +  TY  L++ L ++      +K + +M    CA      + IV  + K   V
Sbjct: 110 KRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMV 169

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKE---HKIEEAFWLLCEMVDRGIDPNVITY 203
             A  +       +     S YN++I  L +E    K+ E +  +C  V     P+ +TY
Sbjct: 170 NRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVH--CFPDTVTY 227

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           S +IS+   +   ++++ +  +M   G  P    +T+L+  Y   G+  EA  L   M  
Sbjct: 228 SALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRA 287

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
              L  V  Y+ LI GL  +G +++A      M ++ C P+V   + LI+   ++ +L  
Sbjct: 288 RRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRD 347

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM-FHQAHSLIEKMAFENCPPNTVTFNTFI 382
           A ++++ M    C+PNVV Y  ++K L +      +A S  E+M  +   P++ T++  I
Sbjct: 348 AIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILI 407

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGI 441
            G C   RV+ A+ LL++M +    P    Y  L++ L    R   A EL  E+ E CG 
Sbjct: 408 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGC 467

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
               V Y  ++    + G + EA  L  +M   G   D   +N ++    +  +++ A  
Sbjct: 468 SSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFS 526

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           L   +   G   PDI S+  +L G+  +GG + A     KM N  I P+  ++N ++
Sbjct: 527 LFRTMEENG-CTPDINSHNIILNGLARTGGPKGALEMFTKMKNSTIKPDVVSFNTIL 582



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 194/448 (43%), Gaps = 38/448 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F    + Y ALI  L +     E +  + +MV           S I+  L     V  +L
Sbjct: 114 FEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRAL 173

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHG 279
            +  Q+  R C P   ++ S++   +  G   +  +L+N M  E    P+ V YS LI  
Sbjct: 174 SVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISA 233

Query: 280 LCSNGSMDEAVSVSYQMEENSCPP-----------------------------------N 304
                  D A+ +  +M+EN   P                                    
Sbjct: 234 FAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLT 293

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V TY+ LI G  K+G +  A   +  M+ +GC P+VV    ++ +L ++N    A  L +
Sbjct: 294 VFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFD 353

Query: 365 KMAFENCPPNTVTFNTFIKGLCGC-GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           +M   NC PN VT+NT IK L      +  A    ++MK+   +P+  TY+ L+DG  + 
Sbjct: 354 EMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKT 413

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           NRV++A  L+ E+++ G       Y ++++ +  A     A +L  ++        A  +
Sbjct: 414 NRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVY 473

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            ++I  + K G++N AI L + ++  G   PD+ +Y +L+ G+  +  M EAF   + M 
Sbjct: 474 AVMIKHFGKCGRLNEAINLFNEMKKLG-CTPDVYAYNALMTGMVRAERMDEAFSLFRTME 532

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPV 571
             G  P+  + N+++  L    G  G +
Sbjct: 533 ENGCTPDINSHNIILNGLARTGGPKGAL 560



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 110/241 (45%), Gaps = 3/241 (1%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y  +++ L ++ MF +    I+ M   +C       +  ++ L     V+ A+ + 
Sbjct: 117 DSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVF 176

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCR 457
            Q+K  +C P  +TYN ++  L++    ++  EL  E+  +     + VTY+ ++    +
Sbjct: 177 YQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAK 236

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
                 A +L  +M   G +  A  +  ++  Y K GKV  A+ L+  +R        + 
Sbjct: 237 LNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMR-ARRCLLTVF 295

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +YT L+ G+  SG +++A++  + ML +G  P+    N L+ ++     HL     L D 
Sbjct: 296 TYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLI-NILGRSNHLRDAIKLFDE 354

Query: 578 M 578
           M
Sbjct: 355 M 355


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 259/564 (45%), Gaps = 47/564 (8%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           ++ +L+ MK      +     SVI  Y   G  ++A+KMFY + E        +YN    
Sbjct: 112 IEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCE--------LYNCF-- 161

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--- 130
                                   P V   N LL  L KN +VD A +L  +M  +G   
Sbjct: 162 ------------------------PCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDH 197

Query: 131 ---CAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSG----VSVYNALINGLCKEHKIE 182
                 D  S   +V  +C +G+VEE R+L   R+G+G    V  YN +I+G CK+  ++
Sbjct: 198 GLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLK 257

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  +  E+  +G  P + TY  +I   C  G  +    +L +M V G N N+  F S++
Sbjct: 258 RATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSII 317

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                 G   +A+++   M   G  P++  Y+ LI+  CS G + EA     + +E +  
Sbjct: 318 DAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLL 377

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PN  +Y+ L+  + K G+ + AS +  ++   G  P++V+Y   +           A  +
Sbjct: 378 PNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMV 437

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            EKM  +   P+   +N  + GLC  GR   A  LL +M      P+   Y  L+DG +R
Sbjct: 438 REKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIR 497

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            N + +A EL   +   GI   +V YN ++ G+C+ G + +A   + KM I     D  T
Sbjct: 498 NNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYT 557

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
            + +I  Y KQ  +++A+++  ++    ++ P++++YTSL+ G C    M  A    + M
Sbjct: 558 HSTVIDGYVKQHDLDSALKMFGQMM-KQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAM 616

Query: 543 LNEGICPNFATWNVLVRSLFSNLG 566
            +  + PN  T+ +L+   FS  G
Sbjct: 617 QSFNLEPNVVTYTILIGG-FSKTG 639



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 248/512 (48%), Gaps = 17/512 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +K ++     + +++K++G   +   + ++I+ + + G  +   ++   +   G
Sbjct: 246 IIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMG 305

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L   VK++N I+DA            +   M   G EP++ TYNIL+   C   R+  A 
Sbjct: 306 LNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAE 365

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           + L     +   P+  SYT ++ + CK G    A ++  +         +  Y A I+G 
Sbjct: 366 EFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGS 425

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
               +I+ A  +  +M+++G+ P+   Y+ ++S LC  G    +  +L +M      P+ 
Sbjct: 426 VAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDA 485

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
           + + +L+ G++      +A++L+  ++ +G  P VV Y+ +I GLC  G M +AVS   +
Sbjct: 486 YMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNK 545

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+  +  P+  T+S +IDG+ K  +L  A +++ +M+     PNVVAYT ++   C+   
Sbjct: 546 MKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIAD 605

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A  +   M   N  PN VT+   I G    G+ + A    + M    CLPN TT++ 
Sbjct: 606 MSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHY 665

Query: 416 LLDGLLRVNRVKEAFELVTEIEKC------------GIQLNIVTYNTILHGVCRAGMVVE 463
           L++GL  +       E   E ++             G    I TYN+I+  +C+ GMV  
Sbjct: 666 LINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDT 725

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           A  L  KML +G  +D++ F+ +++  C+ GK
Sbjct: 726 AQLLQTKMLRKGFLMDSVCFSALLHGLCQTGK 757



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 247/538 (45%), Gaps = 22/538 (4%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           VG  E+  K+       G  P V  YN I+D    +        ++  +K  G  P + T
Sbjct: 218 VGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLET 277

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           Y  L+   CK  +     +LL EM   G   +   + +I+ +  K G V++A E+ MR  
Sbjct: 278 YGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEM-MRMM 336

Query: 163 S------GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           +       ++ YN LIN  C   +I+EA   L    +R + PN  +Y+ ++ + C  G+ 
Sbjct: 337 TEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDY 396

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             +  +L ++   G  P++ S+ + + G + GG    A  +  +M+ +G  P+   Y+ L
Sbjct: 397 VMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVL 456

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GLC  G    A  +  +M + +  P+   Y+ L+DGF +   L  A++++  ++S G 
Sbjct: 457 MSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGI 516

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P VV Y  M+K LC+      A S + KM   N  P+  T +T I G      +D A+K
Sbjct: 517 DPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALK 576

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           +  QM + +  PN+  Y  L++G  ++  +  A ++   ++   ++ N+VTY  ++ G  
Sbjct: 577 MFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFS 636

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC---------KQGKVNNAIQLLD--- 504
           + G   +A      ML+     +  TF+ +I             ++ + N+   +LD   
Sbjct: 637 KTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFA 696

Query: 505 -RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             I  G  W+  I +Y S++  +C  G +  A +   KML +G   +   ++ L+  L
Sbjct: 697 TMISEG--WSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGL 752



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 233/518 (44%), Gaps = 55/518 (10%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  LL +M V G++ +  VF S+I++  + GL ++A +M   + E G +P +  YN +++
Sbjct: 294 VDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILIN 353

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN------------------- 114
              +  R           K   + PN F+Y  L+ A CK                     
Sbjct: 354 FSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKP 413

Query: 115 ----------------RVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR--- 155
                            +D A  +  +M  KG  PDA  Y  ++S +CK G+   A+   
Sbjct: 414 DLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLL 473

Query: 156 --ELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
              L +       +Y  L++G  + +++++A  L   ++ +GIDP V+ Y+ +I  LC  
Sbjct: 474 SEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKC 533

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
           G +  ++  + +M +    P+ ++ ++++ GY+       A  ++ +M+++ + PNVVAY
Sbjct: 534 GKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAY 593

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           ++LI+G C    M  A  V   M+  +  PNV TY+ LI GF+K G    A+  +  M+ 
Sbjct: 594 TSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLM 653

Query: 334 NGCSPNVVAYTCMVK---------VLCQNNMFHQAHSLIE---KMAFENCPPNTVTFNTF 381
           N C PN   +  ++          +L + N  +    +++    M  E       T+N+ 
Sbjct: 654 NNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSI 713

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT-EIEKCG 440
           I  LC  G VD A  L  +M +   L +   ++ LL GL +  + KE   +++ ++ K  
Sbjct: 714 IVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKID 773

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
            Q     Y+  L      G   EA  +L   LIE +KL
Sbjct: 774 FQ-TAFEYSLKLDKYLYDGKPSEASYILLN-LIEDSKL 809



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 150/341 (43%), Gaps = 21/341 (6%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EID    + ++M  +GV     ++  +++   + G    A  +   + +  L+P   +Y 
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYA 489

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D  +  N       ++  +   G++P V  YN+++K LCK  ++  A   + +M   
Sbjct: 490 TLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIA 549

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHKIEEA 184
             APD  +++T++    K   ++ A     + +  ++   V  Y +LING CK   +  A
Sbjct: 550 NHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRA 609

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +   M    ++PNV+TY+ +I      G  E +      M +  C PN  +F  L+ G
Sbjct: 610 EKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLING 669

Query: 245 Y-------LLGGRTHEAS-----DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
                   LL  +  E       D +  MI EG+   +  Y+++I  LC +G +D A  +
Sbjct: 670 LTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLL 729

Query: 293 SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
             +M       +   +SAL+ G  + G     S+ W  +IS
Sbjct: 730 QTKMLRKGFLMDSVCFSALLHGLCQTGK----SKEWRNIIS 766



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 135/305 (44%), Gaps = 17/305 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L +K      + LL +M    +     ++ ++++ + R    ++A ++F  +   G
Sbjct: 456 LMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKG 515

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  YN ++  L    + +      + MK     P+ +T++ ++    K + +D A 
Sbjct: 516 IDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSAL 575

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           K+  +M  +   P+ V+YT++++  CK+  +  A ++     +      V  Y  LI G 
Sbjct: 576 KMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGF 635

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN----VETS--------LGIL 223
            K  K E+A      M+     PN  T+  +I+ L ++ N    +E +        L   
Sbjct: 636 SKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFF 695

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
             M   G +  I ++ S++      G    A  L  +M+R+GFL + V +S L+HGLC  
Sbjct: 696 ATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQT 755

Query: 284 GSMDE 288
           G   E
Sbjct: 756 GKSKE 760


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 146/556 (26%), Positives = 256/556 (46%), Gaps = 44/556 (7%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
            Y +  +  +GV+     F + IN++ + G    A+ +F ++   G+ P V  YN+++D 
Sbjct: 240 SYEVFDLACQGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDG 299

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           L    RF         M R  + P+V TY +L+  L K    + A ++LVEM + G AP+
Sbjct: 300 LFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPN 359

Query: 135 AVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWLLC 189
            V +  ++   C+ G + EA     E+AM+        +N L+ G C+ +++E+A  +L 
Sbjct: 360 EVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLV 419

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF---------------------- 227
            ++  G+  N+   S +I  L +     ++L I+ ++                       
Sbjct: 420 YILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCE 479

Query: 228 --------------VRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
                         V+G   N  +  +LL G    G   E  ++  +M+ +G L + ++Y
Sbjct: 480 GHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISY 539

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           +TLI G C  G ++EA  +  +M +    P+  TY+ L+ G A  G +    ++ +    
Sbjct: 540 NTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKE 599

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
            G  PNV  Y  +++  C+ +    A    + + +E    ++V +N  I   C  G V  
Sbjct: 600 YGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTE 659

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A KL D MK    LP   TY+ L+ G+  + RV EA E+  E+   G+  N+  Y  ++ 
Sbjct: 660 AFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIG 719

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR-IRGGGEW 512
           G C+ G +     +L +M   G + + IT+ I+I  YCK G +  A +LL+  IR G   
Sbjct: 720 GHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNG--I 777

Query: 513 NPDIISYTSLLWGICN 528
            PD ++Y +L  G C 
Sbjct: 778 APDTVTYNALQKGYCK 793



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 170/330 (51%), Gaps = 1/330 (0%)

Query: 229 RGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
           RG  P + +   LL   +     H++ ++++ +  +G  P+V  ++T I+  C  G + +
Sbjct: 215 RGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFCKGGRVGD 273

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           AV +  +ME     PNV TY+ +IDG  K+G    A +  +RM+ +  +P+VV Y  ++ 
Sbjct: 274 AVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLIS 333

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            L +  MF +A+ ++ +M      PN V FN  I G C  G +  A+++ D+M      P
Sbjct: 334 GLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKP 393

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
           N  T+N LL G  R N++++A +++  I   G+ +N+   + ++H +      V A +++
Sbjct: 394 NFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIV 453

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
            K+L    ++       ++   CK    + AI+L  ++        + ++  +LL G+C 
Sbjct: 454 TKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCE 513

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            G M+E F  L++ML +G+  +  ++N L+
Sbjct: 514 RGNMEEVFEVLKQMLEKGLLLDRISYNTLI 543



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 156/306 (50%), Gaps = 11/306 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L E+  ++ V  +L+QM  +G+      + ++I    + G  E+A K+   + +  
Sbjct: 507 LLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQE 566

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +P    YN ++  L    +   ++ +    K  G  PNV+TY +LL+  CK +R++ A 
Sbjct: 567 FQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAV 626

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV----SVYNALING 174
           K    +  +     +V Y  ++++ C++G V EA +L  AM+   G+    + Y++LI+G
Sbjct: 627 KFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMK-SRGILPTCATYSSLIHG 685

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           +C   +++EA  +  EM + G+ PNV  Y+ +I   C +G ++    IL +M   G  PN
Sbjct: 686 MCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPN 745

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             ++T ++ GY   G   EA +L N MIR G  P+ V Y+ L  G C     +  ++V+ 
Sbjct: 746 KITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCK----ERELTVTL 801

Query: 295 QMEENS 300
           Q +  S
Sbjct: 802 QSDHKS 807



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 9/322 (2%)

Query: 8   KCE--IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTV 65
           KCE   + ++   +   V+G++ +     ++++     G  E+  ++  ++ E GL    
Sbjct: 477 KCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDR 536

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
             YN ++       +      +   M +   +P+ +TYN L+K L    ++D  ++LL E
Sbjct: 537 ISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHE 596

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG------SGVSVYNALINGLCKEH 179
               G  P+  +Y  ++   CK  ++E+A +            S V VYN LI   C+  
Sbjct: 597 AKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSV-VYNILIAAYCRIG 655

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            + EAF L   M  RGI P   TYS++I  +C +G V+ +  I  +M   G  PN+  +T
Sbjct: 656 NVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYT 715

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           +L+ G+   G+      +   M   G  PN + Y+ +I G C  G+M EA  +  +M  N
Sbjct: 716 ALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRN 775

Query: 300 SCPPNVTTYSALIDGFAKAGNL 321
              P+  TY+AL  G+ K   L
Sbjct: 776 GIAPDTVTYNALQKGYCKEREL 797


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 205/384 (53%), Gaps = 7/384 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIEKL +    + ++ L+ Q+    + C E +FI+VI +Y   G  + A++ F RI  FG
Sbjct: 141 MIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFG 200

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSN-MKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           L+P+V+ +N +L+ L+   RF +++ ++ N  K+ G+ PNVFT NIL+KALCK N +D A
Sbjct: 201 LQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAA 260

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALING 174
            ++L EM   G  P+ V+YTTI+      G +  AR      L   +    + Y  L++G
Sbjct: 261 IRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDG 320

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK+ +  +A  ++ EM +  ++PN +TY  II + C        L +L  M  +   P+
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
                 ++      G+   A +LW +++++   P+    STLIH LC  G + EA  +  
Sbjct: 381 SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFD 440

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           + E+ S P  + TY+ALI G  + G L  A+++W+ M+  GC PN   Y  ++K  C+  
Sbjct: 441 EFEKGSIPSTL-TYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVG 499

Query: 355 MFHQAHSLIEKMAFENCPPNTVTF 378
              +   ++E+M    C PN  T+
Sbjct: 500 NAREGIRVMEEMLDNGCLPNKATY 523



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 198/436 (45%), Gaps = 18/436 (4%)

Query: 133 PDAVSYTTIVSSICK-------LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           P  +S   +VS I +       L   + A +    F      Y A+I  L K    E   
Sbjct: 96  PQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPME 155

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+ ++    I      + T+I +    G  + ++    ++   G  P++ SF +LL   
Sbjct: 156 TLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTL 215

Query: 246 LLGGRTHEASDLWNRMIRE-----GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +   R     DL + M +      G +PNV   + L+  LC    +D A+ V  +M    
Sbjct: 216 VQNKRF----DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMG 271

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV TY+ ++ G+   G+++GA +++  ++  G  P+   YT ++   C+   F  A 
Sbjct: 272 FIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAV 331

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++++M      PN VT+   I+  C   +    + LLD M + + +P+      ++D L
Sbjct: 332 KVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDML 391

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
               +V+ A EL  ++ K     +    +T++H +C+ G V EA +L  +   +G+    
Sbjct: 392 CEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEKGSIPST 450

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N +I   C+ G++  A +L D +   G   P+  +Y  L+ G C  G  +E    ++
Sbjct: 451 LTYNALIAGMCEGGELPEAARLWDNMVEKG-CVPNAFTYNMLIKGFCKVGNAREGIRVME 509

Query: 541 KMLNEGICPNFATWNV 556
           +ML+ G  PN AT+ +
Sbjct: 510 EMLDNGCLPNKATYAI 525



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 183/393 (46%), Gaps = 7/393 (1%)

Query: 99  NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA 158
           N  TY  +++ L K    +    L+ ++           + T++ +    G+ + A    
Sbjct: 134 NYETYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTF 193

Query: 159 MRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTIISSLCD 212
           +R  S      V  +N L+N L +  + +    +      + GI PNV T + ++ +LC 
Sbjct: 194 LRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCK 253

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
             +++ ++ +L +M   G  PN+ ++T++L GY+  G    A  ++  ++  G++P+   
Sbjct: 254 KNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTT 313

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ L+ G C  G   +AV V  +MEEN   PN  TY  +I+ + K         + + M+
Sbjct: 314 YTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDML 373

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
                P+      ++ +LC+      A  L +K+  +NC P+    +T I  LC  G+V 
Sbjct: 374 EKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVW 433

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
            A KL D+ ++   +P+  TYN L+ G+     + EA  L   + + G   N  TYN ++
Sbjct: 434 EARKLFDEFEKGS-IPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLI 492

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
            G C+ G   E  +++ +ML  G   +  T+ I
Sbjct: 493 KGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 39/282 (13%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRM--ISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           P   +   ++   ++  NL  A QI++         + N   Y  M++ L +   F    
Sbjct: 96  PQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPME 155

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +LI ++           F T I+     GR   A++   ++  +   P++ ++N LL+ L
Sbjct: 156 TLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTL 215

Query: 421 LRVNRVKEAFELVTEIEK-CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           ++  R    F+LV  + K C  +  IV                                +
Sbjct: 216 VQNKR----FDLVHLMFKNCRKKFGIVP-------------------------------N 240

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T NI++ A CK+  ++ AI++L+ +   G + P++++YT++L G  + G M  A    
Sbjct: 241 VFTCNILVKALCKKNDIDAAIRVLEEMPAMG-FIPNVVTYTTILGGYVSKGDMVGARRVF 299

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            ++L+ G  P+  T+ +L+         +  V ++D++  N+
Sbjct: 300 GEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENR 341


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 136/521 (26%), Positives = 246/521 (47%), Gaps = 10/521 (1%)

Query: 43  VGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFT 102
           + + ++A+   ++ R  G+ P V   N + + L+          +Y  +KR G  PN +T
Sbjct: 173 LNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYT 232

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG 162
           Y I++KALCK   +     +  EM   G  P +  +   +  +C   + +   E+   F 
Sbjct: 233 YAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFR 292

Query: 163 SG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVE 217
            G     V  Y A++ G C E K++EA  +  +M  +G+ P+V  YS++I   C   N+ 
Sbjct: 293 KGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLL 352

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L +  +M  RG   N    + +L      G T E  D +  +   G   + VAY+ + 
Sbjct: 353 RALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVF 412

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
             LC  G +++AV +  +M+      +V  Y+ LI+G+   G+L+ A  ++  M   G  
Sbjct: 413 DALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLK 472

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P++V Y  +   L +N    +   L++ M  +   PN+ T    I+GLC  G+V  A   
Sbjct: 473 PDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVY 532

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
            + ++      NI  Y+ +++G    + VK+++E+  ++   G      +   +L  +C 
Sbjct: 533 FNSLED----KNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCM 588

Query: 458 AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
            G + +A +LL +ML+   +   I ++ I+ A C+ G + NA  L D     G + PD++
Sbjct: 589 TGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRG-FTPDVV 647

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +YT ++   C    +QEA    Q M   GI P+  T+ VL+
Sbjct: 648 TYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLL 688



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 139/604 (23%), Positives = 274/604 (45%), Gaps = 89/604 (14%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G  ++AL ++ +++ FG  P    Y  ++ AL  +        ++  M+R G+ P+ + +
Sbjct: 209 GEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCF 268

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAP-DAVSYTTIVSSICKLGQVEEAR---ELAM 159
              ++ LC N+R D  Y++L +   KG AP +  +YT +V   C   +++EA+   +   
Sbjct: 269 AAYIEGLCNNHRSDLGYEVL-QAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDME 327

Query: 160 RFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI---------------- 201
           R G    V VY++LI+G CK H +  A  L  EM+ RG+  N +                
Sbjct: 328 RQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTL 387

Query: 202 -------------------TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
                               Y+ +  +LC +G VE ++ ++ +M  +    ++  +T+L+
Sbjct: 388 EVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLI 447

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            GY L G    A +++  M  +G  P++V Y+ L  GL  NG   E V +   ME     
Sbjct: 448 NGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMK 507

Query: 303 PNVTT-------------------------------YSALIDGFAKAGNLLGASQIWNRM 331
           PN TT                               YSA+++G+ +   +  + +++ ++
Sbjct: 508 PNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKL 567

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
           ++ G      +   ++  LC      +A  L+++M   N  P+ + ++  +  LC  G +
Sbjct: 568 LNQGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDM 627

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
             A  L D        P++ TY  +++   R+N ++EA +L  ++++ GI+ +++T+  +
Sbjct: 628 KNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVL 687

Query: 452 LHGVCRAGMVVEAFQLLGKML------------IEGTKL--DAITFNIIIYAYCKQGKVN 497
           L G  +   + + F   GK              +E  K+  D + + +++  + K     
Sbjct: 688 LDGSLKE-YLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQ 746

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+ L D++   G   PD I+YT+L+ G+CN G +++A   L +M ++G+ P+    + L
Sbjct: 747 QAVSLFDKMIESG-LEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISAL 805

Query: 558 VRSL 561
            R +
Sbjct: 806 KRGI 809



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/427 (24%), Positives = 207/427 (48%), Gaps = 20/427 (4%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            +++K  G+      +  V ++   +G  E A++M   ++   L   VK Y  +++    
Sbjct: 393 FKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCL 452

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +        ++  MK  G++P++ TYN+L   L +N       KLL  M ++G  P++ +
Sbjct: 453 QGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTT 512

Query: 138 YTTIVSSICKLGQVEEARELAMRFGS----GVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           +  I+  +C  G+V EA    + F S     + +Y+A++NG C+   +++++ +  ++++
Sbjct: 513 HKMIIEGLCSGGKVLEAE---VYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLN 569

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE 253
           +G      +   ++S LC  G++E ++ +L +M +    P+   ++ +L      G    
Sbjct: 570 QGDMAKKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKN 629

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALID 313
           A  L++  +  GF P+VV Y+ +I+  C    + EA  +   M+     P+V T++ L+D
Sbjct: 630 ARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLD 689

Query: 314 G---------FAKAGNL----LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           G         F+  G      L  S I   M     +P+VV YT ++    + + F QA 
Sbjct: 690 GSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAV 749

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           SL +KM      P+T+T+   + GLC  G V+ A+ LL++M      P++   + L  G+
Sbjct: 750 SLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGI 809

Query: 421 LRVNRVK 427
           ++  +V+
Sbjct: 810 IKARKVQ 816



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 129/585 (22%), Positives = 251/585 (42%), Gaps = 92/585 (15%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIR 57
           +I+ L +K ++     + ++M+  GV      F + I       R  L  + L+ F +  
Sbjct: 236 VIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRK-- 293

Query: 58  EFGLKP-TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
             G  P  V  Y  ++     E +      ++ +M+R G+ P+V+ Y+ L+   CK++ +
Sbjct: 294 --GNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNL 351

Query: 117 DGAYKLLVEMGNKGCAP-----------------------------------DAVSYTTI 141
             A  L  EM ++G                                      D V+Y  +
Sbjct: 352 LRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIV 411

Query: 142 VSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
             ++C LG+VE+A E+     + R G  V  Y  LING C +  +  AF +  EM ++G+
Sbjct: 412 FDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGL 471

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            P+++TY+ + + L   G+   ++ +L  M  +G  PN  +   +++G   GG+  EA  
Sbjct: 472 KPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEV 531

Query: 257 LWN-------------------------------RMIREGFLPNVVAYSTLIHGLCSNGS 285
            +N                               +++ +G +    +   L+  LC  G 
Sbjct: 532 YFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGD 591

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +++AV +  +M  ++  P+   YS ++    +AG++  A  +++  +  G +P+VV YT 
Sbjct: 592 IEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTI 651

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG---------LCGCGRVD---- 392
           M+   C+ N   +AH L + M      P+ +TF   + G             G+      
Sbjct: 652 MINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSL 711

Query: 393 WAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
           +   +L  M+Q +  P++  Y  L+DG ++ +  ++A  L  ++ + G++ + +TY  ++
Sbjct: 712 YVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALV 771

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
            G+C  G V +A  LL +M  +G   D    + +     K  KV 
Sbjct: 772 SGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIKARKVQ 816



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 188/386 (48%), Gaps = 7/386 (1%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           +  +N  +      +  ++A   L +   RGI P+V+T + + + L + G V+ +L +  
Sbjct: 160 LRAFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYE 219

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           Q+   G  PN +++  ++K     G   +   ++  M R G +P+   ++  I GLC+N 
Sbjct: 220 QLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNH 279

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
             D    V     + + P  V  Y+A++ GF     L  A  +++ M   G  P+V  Y+
Sbjct: 280 RSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYS 339

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C+++   +A +L ++M       N V  +  +  L   G +   ++++DQ K+ 
Sbjct: 340 SLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCL---GEMGMTLEVVDQFKEL 396

Query: 405 E---CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           +      +   YN + D L  + +V++A E+V E++   + L++  Y T+++G C  G +
Sbjct: 397 KESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDL 456

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTS 521
           V AF +  +M  +G K D +T+N++     + G     ++LLD +   G   P+  ++  
Sbjct: 457 VTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQG-MKPNSTTHKM 515

Query: 522 LLWGICNSGGMQEAFIYLQKMLNEGI 547
           ++ G+C+ G + EA +Y   + ++ I
Sbjct: 516 IIEGLCSGGKVLEAEVYFNSLEDKNI 541



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/284 (20%), Positives = 109/284 (38%), Gaps = 28/284 (9%)

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
           P + +T+  L        N   A   +  +   G S  +  Y  ++K+L   N+  Q  +
Sbjct: 62  PSSFSTFDVLQTLHHLHNNPSHALSFFTHLRHTGFSHTISTYAAIIKILSFWNLQRQLDT 121

Query: 362 LIEKM---------------------AFENCPPNTV----TFNTFIKGLCGCGRVDWAMK 396
           L   +                      F     N       FN F+K        D A+ 
Sbjct: 122 LFLHLINRDHPPLPFPLLNLFETLFQDFNTSHKNNYFLLRAFNGFVKTCVSLNMFDKAID 181

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
            L Q ++   LP++ T N L + L+    V +A  +  ++++ G   N  TY  ++  +C
Sbjct: 182 FLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALC 241

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP-D 515
           + G + +   +  +M   G    +  F   I   C   + +   ++L   R G    P +
Sbjct: 242 KKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNA--PLE 299

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + +YT+++ G CN   + EA      M  +G+ P+   ++ L+ 
Sbjct: 300 VYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIH 343


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 157/565 (27%), Positives = 266/565 (47%), Gaps = 15/565 (2%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMI 84
           G +CS   F+ ++  YR     E  L     +R   +K T +  +H+L A       S  
Sbjct: 99  GFACSS--FLKLLARYRIFNEIEDVLG---NLRNENVKLTHEALSHVLHAYAESGSLSKA 153

Query: 85  NPIYSNMKR--DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIV 142
             IY  +    D + P+V   N LL  L K+ R+  A K+  EM ++G + D  S   +V
Sbjct: 154 VEIYDYVVELYDSV-PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212

Query: 143 SSICKLGQVEEARELAM-RFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGID 197
             +C  G+VE  R+L   R+G G    +  YN +I G CK   IE A+ +  E+  +G  
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P + T+ T+I+  C  G+   S  +L ++  RG   ++    +++      G   + ++ 
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAES 332

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              +I     P+V  Y+ LI+ LC  G  + AV    +  +    PN  +Y+ LI  + K
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           +     AS++  +M   GC P++V Y  ++  L  +     A ++  K+      P+   
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAI 452

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +N  + GLC  GR   A  L  +M     LP+   Y  L+DG +R     EA ++ +   
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G+++++V +N ++ G CR+GM+ EA   + +M  E    D  T++ II  Y KQ  + 
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            AI++  R     +  P++++YTSL+ G C  G  + A    ++M    + PN  T+  L
Sbjct: 573 TAIKIF-RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631

Query: 558 VRSLFSNLGHL-GPVYILDDIMANK 581
           +RSL      L   VY  + +M NK
Sbjct: 632 IRSLAKESSTLEKAVYYWELMMTNK 656



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/513 (26%), Positives = 251/513 (48%), Gaps = 27/513 (5%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   I+    + +++K++G   +   F ++IN + + G    + ++   ++E GL+ 
Sbjct: 252 KLGD---IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRV 308

Query: 64  TVKIYNHILDALLAENRFSMINPIYSN--MKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           +V   N+I+DA         ++P  S   +  +  +P+V TYNIL+  LCK  + + A  
Sbjct: 309 SVWFLNNIIDAKYRHGY--KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLC 176
            L E   KG  P+ +SY  ++ + CK  + + A +L ++         +  Y  LI+GL 
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
               +++A  +  +++DRG+ P+   Y+ ++S LC  G    +  +  +M  R   P+ +
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
            + +L+ G++  G   EA  +++  + +G   +VV ++ +I G C +G +DEA++   +M
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            E    P+  TYS +IDG+ K  ++  A +I+  M  N C PNVV YT ++   C    F
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCG-CGRVDWAMKLLDQMKQYECLPNITTYNE 415
             A    ++M   +  PN VT+ T I+ L      ++ A+   + M   +C+PN  T+N 
Sbjct: 607 KMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNC 666

Query: 416 LLDGLLRVNRVK-------------EAF-ELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
           LL G ++    K               F E    ++  G   +   YN+ L  +C  GMV
Sbjct: 667 LLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMV 726

Query: 462 VEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
             A     KM+ +G   D ++F  I++ +C  G
Sbjct: 727 KTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 157/660 (23%), Positives = 285/660 (43%), Gaps = 105/660 (15%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMF-YRIREFGLKPTVKIYNHIL 72
           ++ +L  ++ E V  +      V+++Y   G   +A++++ Y +  +   P V   N +L
Sbjct: 118 IEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLL 177

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
             L+   R      +Y  M   G   + ++  IL+K +C   +V+   KL+     KGC 
Sbjct: 178 SLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCI 237

Query: 133 PDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGLCKEHKIEEAFWL 187
           P+ V Y TI+   CKLG +E A    +EL ++ F   +  +  +ING CKE     +  L
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297

Query: 188 LCEMVDRGI-----------------------------------DPNVITYSTIISSLCD 212
           L E+ +RG+                                    P+V TY+ +I+ LC 
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G  E ++G L +   +G  PN  S+  L++ Y        AS L  +M   G  P++V 
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417

Query: 273 YSTLIHGLCSNGSMDEAVSVSY-----------------------------------QME 297
           Y  LIHGL  +G MD+AV++                                     +M 
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEML 477

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           + +  P+   Y+ LIDGF ++G+   A ++++  +  G   +VV +  M+K  C++ M  
Sbjct: 478 DRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLD 537

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
           +A + + +M  E+  P+  T++T I G      +  A+K+   M++ +C PN+ TY  L+
Sbjct: 538 EALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLI 597

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE-AFQLLGKMLIEGT 476
           +G       K A E   E++   +  N+VTY T++  + +    +E A      M+    
Sbjct: 598 NGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKC 657

Query: 477 KLDAITFNIIIYAYCKQ--------------GKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
             + +TFN ++  + K+              G+ +   +   R++  G W+    +Y S 
Sbjct: 658 VPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG-WSDHAAAYNSA 716

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL-------------FSNLGHLG 569
           L  +C  G ++ A ++  KM+ +G  P+  ++  ++                F NLG  G
Sbjct: 717 LVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKG 776



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 233/503 (46%), Gaps = 21/503 (4%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           +++ I D  +    F  +    S+ K+D    N F  +  LK L +    +    +L  +
Sbjct: 70  VFDRIQDVEIGVKLFDWL----SSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNL 125

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVY---------NALINGLCK 177
            N+       + + ++ +  + G + +A E+   +   V +Y         N+L++ L K
Sbjct: 126 RNENVKLTHEALSHVLHAYAESGSLSKAVEI---YDYVVELYDSVPDVIACNSLLSLLVK 182

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYST--IISSLCDVGNVETSLGILGQMFVRGCNPNI 235
             ++ +A  +  EM DRG   +V  YST  ++  +C+ G VE    ++   + +GC PNI
Sbjct: 183 SRRLGDARKVYDEMCDRG--DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             + +++ GY   G    A  ++  +  +GF+P +  + T+I+G C  G    +  +  +
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           ++E     +V   + +ID   + G  +  ++    +I+N C P+V  Y  ++  LC+   
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A   +++ + +   PN +++   I+  C     D A KLL QM +  C P+I TY  
Sbjct: 361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+ GL+    + +A  +  ++   G+  +   YN ++ G+C+ G  + A  L  +ML   
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              DA  +  +I  + + G  + A ++       G    D++ + +++ G C SG + EA
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG-VKVDVVHHNAMIKGFCRSGMLDEA 539

Query: 536 FIYLQKMLNEGICPNFATWNVLV 558
              + +M  E + P+  T++ ++
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTII 562



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 22/236 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+       +D     + +M  E +   +  + ++I+ Y +      A+K+F  + +  
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV--DG 118
            KP V  Y  +++    +  F M    +  M+   + PNV TY  L+++L K +      
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645

Query: 119 AYKLLVEMGNKGCAPDAVSYTTIVSSICKL--------------GQVEEARELAMRFGSG 164
            Y   + M NK C P+ V++  ++    K               GQ     E   R  S 
Sbjct: 646 VYYWELMMTNK-CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSD 704

Query: 165 -----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                 + YN+ +  LC    ++ A     +MV +G  P+ ++++ I+   C VGN
Sbjct: 705 GWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 162/588 (27%), Positives = 260/588 (44%), Gaps = 88/588 (14%)

Query: 56  IREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNR 115
           IR   + PT+ ++N ++    A    S +  +YS M   G+ PNVFT+NIL+ A CK   
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 116 VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA--------------------- 154
           +  A  L+    N     D V+Y T +   C+ G   +                      
Sbjct: 62  LSLALDLI---RNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNI 118

Query: 155 ------RELAMRFGSGVS---------------------VYNALINGLCKEHKIEEAFWL 187
                 R  ++++G  V                       Y  LI+  CK+H + EA  L
Sbjct: 119 LVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSL 178

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
             EM+  G  P+V+TYS+II+ LC  G +  +  +L +M   G NPN   +  L+     
Sbjct: 179 YEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFK 238

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            G   E+    ++MI  G   ++V  +TLI GL   G  DEA ++   + + +C PN  T
Sbjct: 239 AGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNIT 298

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           Y+A+IDG+ K G++ GA  +   M      PNVV Y+ ++    +  M   A  +++KM 
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK------------------------- 402
            +N  PN   + T I G    G+ D A+ L ++MK                         
Sbjct: 359 DQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKME 418

Query: 403 ----------QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                         L +   Y  L+DG  +  R   AF +  ++ + GI+ ++V YN ++
Sbjct: 419 EAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLI 478

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           +G+ R G   +A  +   +   G   D  T+N +I AYCKQGK+ NAI+L + ++G    
Sbjct: 479 NGLLRLGK-YDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVM 537

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            P+ I+   L+ G+  +G  + A   L +ML  GICPN      L+ +
Sbjct: 538 -PNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNA 584



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/597 (22%), Positives = 266/597 (44%), Gaps = 53/597 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L ++M  +G       + S+IN   + G+  +A  +   + + G+ P     NH++ A+L
Sbjct: 178 LYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNP-----NHVVYAIL 232

Query: 77  AENRFSMINP----IY-SNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
            ++ F   +     IY S M   G+  ++     L+  L K  + D A  +   +    C
Sbjct: 233 VDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNC 292

Query: 132 APDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFW 186
            P+ ++YT ++   CKLG ++ A  L       +    V  Y+++ING  K+  ++ A  
Sbjct: 293 IPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVR 352

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           ++ +M+D+ I PN   Y+T+I      G  + ++ +  +M + G   N     + +    
Sbjct: 353 IMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLK 412

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
            G +  EA  L   M+ +G L + V Y++L+ G    G    A +++ +M E     +V 
Sbjct: 413 RGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVV 472

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            Y+ LI+G  + G    A  +++ +   G +P+   Y  M+   C+      A  L  +M
Sbjct: 473 AYNVLINGLLRLGK-YDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEM 531

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
              +  PN++T N  + GL   G  + A+ +L++M  +   PN+T +  LL+   +  R 
Sbjct: 532 KGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERA 591

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
               ++   +   G++ N   YN+++  +C  GM   A  +L  M  EG   D +T+N +
Sbjct: 592 DTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNAL 651

Query: 487 IYAYCKQGKVNNAI-----------------------------------QLLDRIRGGGE 511
           I+ + K   +  A+                                   ++L +++  G 
Sbjct: 652 IHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSG- 710

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
            +PD   Y +L+ G    G  +EA  +  +M+ +G+ P  +T+NVL+   F+ +G +
Sbjct: 711 LDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIED-FAKVGKM 766



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 143/568 (25%), Positives = 259/568 (45%), Gaps = 46/568 (8%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG+   +DG + LL+ M+ + V  +   + S+IN Y + G+ + A+++  ++ +  + P
Sbjct: 308 KLGD---MDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMP 364

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
              IY  ++D  L   +      +Y+ MK +G+E N F  +  +  L +  +++ A  L 
Sbjct: 365 NAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLC 424

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
             M +KG   D V+YT+++    K G     RE A                         
Sbjct: 425 KYMMSKGLLLDRVNYTSLMDGFFKTG-----RESA------------------------- 454

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           AF +  +M + GI  +V+ Y+ +I+ L  +G  +    +   +   G  P+  ++ +++ 
Sbjct: 455 AFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDAE-SVYSGIRELGLAPDRATYNTMIN 513

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            Y   G+   A  LWN M     +PN +  + L+ GL   G  + A+ V  +M      P
Sbjct: 514 AYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICP 573

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           NVT + AL++  +K        Q+  R++  G   N   Y  ++ VLC   M  +A  ++
Sbjct: 574 NVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVL 633

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             M  E    +TVT+N  I G      ++ A+    QM      P I TYN LL GLL  
Sbjct: 634 NNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAA 693

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             + +A+E++++++  G+  +   YNT++ G  + G   EA +   +M+ +G      T+
Sbjct: 694 GLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTY 753

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           N++I  + K GK++ A +LL+ ++      P+  +Y  L+ G CN     E     +K  
Sbjct: 754 NVLIEDFAKVGKMDQARELLNEMQ-VRRVPPNSSTYDILICGWCNLSKQPELDRISKK-- 810

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPV 571
                    T+    R+LF+ +   G V
Sbjct: 811 ---------TYRTEARTLFAEMNEKGFV 829



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 215/473 (45%), Gaps = 31/473 (6%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K G K E    + L + M  +G+      + S+++ + + G    A  M  ++ E G+K 
Sbjct: 412 KRGRKME--EAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKF 469

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  YN +++ LL   ++     +YS ++  G+ P+  TYN ++ A CK  +++ A KL 
Sbjct: 470 DVVAYNVLINGLLRLGKYDA-ESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLW 528

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKE 178
            EM      P++++   +V  + K G+ E A ++    + +G    V+++ AL+N   K 
Sbjct: 529 NEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKC 588

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
            + +    +   +V  G+  N   Y+++I+ LC +G  + +  +L  M   G + +  ++
Sbjct: 589 ERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTY 648

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +L+ G+       +A   + +M+ EG  P +  Y+ L+ GL + G M +A  +  +M++
Sbjct: 649 NALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKD 708

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           +   P+ + Y+ LI G  K GN   A + +  M++ G  P    Y  +++   +     Q
Sbjct: 709 SGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQ 768

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A  L+ +M     PPN+ T++  I G C               KQ E           LD
Sbjct: 769 ARELLNEMQVRRVPPNSSTYDILICGWCNLS------------KQPE-----------LD 805

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKM 471
            + +     EA  L  E+ + G      T   I     R GMVV+A  +L  M
Sbjct: 806 RISKKTYRTEARTLFAEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDM 858



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 47/233 (20%)

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P    +N  I      G V     L  +M     LPN+ T+N L+    ++  +  A +L
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL 68

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII------ 486
           +  ++   I ++ VTYNT + G C+ G+  + F  L  M+ + T  D+ T NI+      
Sbjct: 69  IRNVD---IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCR 125

Query: 487 -------------------------------------IYAYCKQGKVNNAIQLLDRIRGG 509
                                                I AYCKQ  ++ A+ L + +   
Sbjct: 126 IGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISD 185

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G + PD+++Y+S++ G+C  G + EA   L++M   G+ PN   + +LV SLF
Sbjct: 186 G-FLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLF 237


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 228/489 (46%), Gaps = 16/489 (3%)

Query: 66  KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE 125
           + + +I DAL A N     NP+          P++  +  L  AL +         L  +
Sbjct: 67  RTFRNINDALSAFNHMVNTNPL----------PSIVKFGELFSALVRMKHYKTVVSLSKQ 116

Query: 126 MGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGLCKEHK 180
           M   G + D +S T +++  C+L  V+       + + +     V  ++ LING C E K
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGK 176

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I  A  L   MV RG  PNV +YS II  LC VG     + +L  M V GC P++  + +
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           ++         +EA  ++ +M   G LP VV Y++LIHGL + G   EA  +  +M+  +
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             P++  +S LID   K G +  A  I   M   G  P+V  Y  ++   C      +A 
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEAR 356

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            + E M  +   P+  +F+  + G C   R+D A +L D+M     +P+  +YN L+ GL
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +  R  EA EL  ++   G   N+VTY+ +L  + + G + +A  L   M   G K D 
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+NI+I   CK GK  +A +L   +   G   P+    T  + G+C  G + EA    +
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKG-LQPNNWVCTPTIDGVCKGGLLDEAHKAFR 535

Query: 541 KMLNEGICP 549
           +M  +   P
Sbjct: 536 QMEKDDCSP 544



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 214/430 (49%), Gaps = 5/430 (1%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L +QM++ G+S        +IN + R+   +    +  +I + GL+P V  ++ +++
Sbjct: 110 VVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLIN 169

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               E +      ++  M   G +PNV +Y+I++K LC+  +     KLL  M   GC P
Sbjct: 170 GFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEP 229

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRF-GSG----VSVYNALINGLCKEHKIEEAFWLL 188
           D V Y TIV  +CK   V EA  +  +  G+G    V  Y +LI+GL    + +EAF LL
Sbjct: 230 DVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLL 289

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM    I P+++ +S +I  +C  G V  +  IL  M   G  P++ ++ +L+ GY L 
Sbjct: 290 NEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLR 349

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
               EA  ++  MI +G +P+V ++S L++G C    +DEA  +  +M      P+  +Y
Sbjct: 350 MEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSY 409

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + LI G  +A   L A +++  M SNG  PN+V Y+ ++  L +     QA  L   M  
Sbjct: 410 NTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMEN 469

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
               P+ VT+N  I G+C  G+   A +L  ++      PN       +DG+ +   + E
Sbjct: 470 SGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDE 529

Query: 429 AFELVTEIEK 438
           A +   ++EK
Sbjct: 530 AHKAFRQMEK 539



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 207/405 (51%), Gaps = 5/405 (1%)

Query: 9   CEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           C +D    +L ++   G+  +   F ++IN +   G   +A+++F  +   G KP V  Y
Sbjct: 140 CHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSY 199

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           + I+  L    + + +  +  +MK  G EP+V  YN ++  LCK+  V+ A  +  +M  
Sbjct: 200 SIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKG 259

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEE 183
            G  P  V+YT+++  +  LG+ +EA  L      G     +  ++ LI+ +CKE ++ E
Sbjct: 260 TGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSE 319

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A  +L  M + G++P+V TY+T+++  C    V  +  +   M  +G  P++ SF+ L+ 
Sbjct: 320 ARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVN 379

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY    R  EA  L++ M   G +P+ V+Y+TLI GLC      EA  +   M  N  PP
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP 439

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N+ TYS L+D  +K G L  A  ++  M ++G  P++V Y  M+  +C+   F  A  L 
Sbjct: 440 NLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELF 499

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLP 408
            +++ +   PN       I G+C  G +D A K   QM++ +C P
Sbjct: 500 AELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 203/400 (50%), Gaps = 2/400 (0%)

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
           I +A      MV+    P+++ +  + S+L  + + +T + +  QM + G + ++ S T 
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  +           +  ++I+ G  PNV+ +STLI+G C  G +  A+ +   M    
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV +YS +I G  + G      ++   M   GC P+VV Y  +V  LC++ + ++A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            +  KM      P  VT+ + I GL   GR   A  LL++MK    +P++  ++ L+D +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
            +   V EA  ++  + + G++ ++ TYNT+++G C    VVEA ++   M+ +G   D 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            +F+I++  YCK  +++ A QL D +   G   PD +SY +L+ G+C +    EA    +
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRG-LIPDTVSYNTLISGLCQARRPLEAEELFK 430

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            M + G  PN  T+++L+  L S  G+L     L   M N
Sbjct: 431 DMHSNGYPPNLVTYSILLDCL-SKQGYLDQAMGLFRAMEN 469



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 153/308 (49%), Gaps = 5/308 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++++L +   ++   ++  +MK  G+  +   + S+I+  R +G  ++A  +   ++   
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P +  ++ ++D +  E   S    I   M   G+EP+V TYN L+   C    V  A 
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEAR 356

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGL 175
           K+   M +KG  PD  S++ +V+  CK  +++EA++L               YN LI+GL
Sbjct: 357 KVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGL 416

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C+  +  EA  L  +M   G  PN++TYS ++  L   G ++ ++G+   M   G  P++
Sbjct: 417 CQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDL 476

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  ++ G    G+  +A +L+  +  +G  PN    +  I G+C  G +DEA     Q
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536

Query: 296 MEENSCPP 303
           ME++ C P
Sbjct: 537 MEKDDCSP 544



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 139/274 (50%), Gaps = 1/274 (0%)

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
           ++++A+S    M   +  P++  +  L     +  +      +  +M   G S +V++ T
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            ++   C+        S++ K+      PN +TF+T I G C  G++  A++L D M   
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
              PN+ +Y+ ++ GL RV +  E  +L+  ++  G + ++V YNTI+  +C+  +V EA
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +  KM   G     +T+  +I+     G+   A  LL+ ++GG    PD+++++ L+ 
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIM-PDLVAFSVLID 309

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +C  G + EA + L+ M   G+ P+ AT+N L+
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 264/544 (48%), Gaps = 6/544 (1%)

Query: 26  VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           VS S+      ++S R     + AL  ++++      P VK +N +   +     ++   
Sbjct: 44  VSDSDTSRAQFLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAI 103

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
            +  +M   G++P V T NI++  LC+ +     + +L  M   G  P  V++ TIV+ +
Sbjct: 104 SLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGL 163

Query: 146 CKLGQVEEARELA-----MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           C  G V +A         M + S      A+ NGLCK      A   L +M ++  + +V
Sbjct: 164 CVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDV 223

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
             YS ++  LC  G V  +L +  QM  +G  P++ ++  L+ G     R  EA+ L   
Sbjct: 224 TAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLAN 283

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+R+G +P+V  ++ +       G +  A S+   M       +V TY+++I        
Sbjct: 284 MMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQ 343

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A ++++ MIS GC PN+V YT ++   C+    ++A   + +M      PN VT++T
Sbjct: 344 MKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWST 403

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
            I G+C  G+   A +L   M ++  LPN+ T   +LDGL + N   EA  L  E+EK  
Sbjct: 404 LIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMN 463

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             LNI+ YN IL G+C +G + +A +L   +  +G K+D +T+NI+I   CK+G +++A 
Sbjct: 464 WDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAE 523

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            LL ++   G   P+  +Y   + G+     + ++  YL  M ++G   +  T   L+  
Sbjct: 524 DLLMKMEENG-CPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINY 582

Query: 561 LFSN 564
             +N
Sbjct: 583 FSAN 586



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 243/492 (49%), Gaps = 6/492 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L++ M   GV  +      VIN   R+  A     +   + + G++P++  +N I++ L 
Sbjct: 105 LIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLC 164

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E   +       ++K  G E + +T   +   LCK      A   L +M  K C  D  
Sbjct: 165 VEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVT 224

Query: 137 SYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y+ +V  +CK G V EA  L  +  G G+      YN LI+GLC   + +EA  LL  M
Sbjct: 225 AYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANM 284

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +GI P+V T++ I       G +  +  I   M   G   ++ ++TS++  + +  + 
Sbjct: 285 MRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQM 344

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A ++++ MI +G LPN+V Y++LIHG C   +M++A+    +M  N   PNV T+S L
Sbjct: 345 KDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTL 404

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G  KAG  + A +++  M  +G  PN+     ++  L + N   +A SL  ++   N 
Sbjct: 405 IGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNW 464

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             N + +N  + G+C  G+++ A++L   +       ++ TYN ++ GL +   + +A +
Sbjct: 465 DLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAED 524

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           L+ ++E+ G   N  TYN  + G+ R   + ++ + L  M  +G + DA T   +I  Y 
Sbjct: 525 LLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLI-NYF 583

Query: 492 KQGKVNNAIQLL 503
              K N A+++ 
Sbjct: 584 SANKENRALEVF 595



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 5/207 (2%)

Query: 7   EKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           E   ++   Y L +M   G+  +   + ++I    + G    A ++F  + + G  P ++
Sbjct: 375 ETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQ 434

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
               ILD L   N  S    ++  +++   + N+  YNI+L  +C + +++ A +L   +
Sbjct: 435 TCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYL 494

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKI 181
            +KG   D V+Y  ++  +CK G +++A +L M+            YN  + GL + ++I
Sbjct: 495 SSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQI 554

Query: 182 EEAFWLLCEMVDRGIDPNVITYSTIIS 208
            ++   L  M D+G   +  T   +I+
Sbjct: 555 SKSTKYLMFMKDKGFQADATTTKFLIN 581


>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 719

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 260/553 (47%), Gaps = 47/553 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+ +K  G   +E +   +I S+ R+GLA+   ++F +I   G+ P+ ++YN ++DAL+
Sbjct: 169 LLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALV 228

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             N   +    +  M  D  +P+ FTYNIL+  +C++  VD A +L+ +M   G +P+  
Sbjct: 229 KSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVF 288

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +YT ++       +V+EA  +     A +     +   + I+G+ +     +AF L  E 
Sbjct: 289 TYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEF 348

Query: 192 VDR-----------------------------------GIDPNVITYSTIISSLCDVGNV 216
           ++R                                   G  P+  T++  ++ L    ++
Sbjct: 349 IEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDL 408

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
                IL +   +G      ++ +L+K   + G+  E +  +N+M+++G L NV +Y+ +
Sbjct: 409 NEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMV 468

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           I   C    MD+A +   +M+    PPN+ T++ LIDG+ K G +  +  +   ++ +G 
Sbjct: 469 IDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGF 528

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            P++  ++ ++  LC+      A     +M      PN VT+N  I  LC  G V  +MK
Sbjct: 529 KPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMK 588

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL +M+     P++ ++N L+    R+ +V++A +L + +   G+  +  TY   +   C
Sbjct: 589 LLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFC 648

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW---- 512
           ++G   EA +L   M   G   D+ T NII+ A  KQ +   A ++    +   EW    
Sbjct: 649 QSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKI---AKTCSEWGILV 705

Query: 513 NPDIISYTSLLWG 525
           N   IS  S L G
Sbjct: 706 NFAAISEDSALLG 718



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 205/487 (42%), Gaps = 40/487 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   +D      QQM  +        +  +I+   R G+ ++AL++  ++   G
Sbjct: 223 VIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLG 282

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY----------------- 103
             P V  Y  ++D      +      +   MK   + P+  T                  
Sbjct: 283 YSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAF 342

Query: 104 ------------------NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                             + LL  L   N    A  LL + G  G  PD+ ++   ++ +
Sbjct: 343 ELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCL 402

Query: 146 CKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            K   + E   +  RF       G S Y ALI  L    K+ E      +MV  G+  NV
Sbjct: 403 IKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNV 462

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            +Y+ +I   C    ++ +     +M  +G  PN+ +F +L+ GY  GG   ++ DL   
Sbjct: 463 CSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVM 522

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           ++  GF P++  +S++I GLC    +++A+    +M      PN  TY+ LI      G+
Sbjct: 523 LLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGD 582

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  + ++  +M ++G +P+V ++  +++  C+      A  L   M      P+  T+  
Sbjct: 583 VPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVA 642

Query: 381 FIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
           FIK  C  GR + A +L   M+   C+P+  T N +LD L++ ++ + A ++     + G
Sbjct: 643 FIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWG 702

Query: 441 IQLNIVT 447
           I +N   
Sbjct: 703 ILVNFAA 709



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 190/413 (46%), Gaps = 9/413 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY- 68
           ++D    +L+ MK   VS SE    S I+   R     +A ++     E   +P ++   
Sbjct: 302 KVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIE--REPVLQRLA 359

Query: 69  -NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
            + +L  L ++N       +     + G +P+  T+NI +  L K   ++    +L    
Sbjct: 360 CDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFV 419

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIE 182
            +G      +Y  ++ ++   G+V E      +         V  YN +I+  CK   ++
Sbjct: 420 EQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMD 479

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A     EM  +GI PN++T++T+I   C  G +  S  +L  +   G  P+I +F+S++
Sbjct: 480 KATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSII 539

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G     +  +A   ++ M+  G  PN V Y+ LIH LC  G +  ++ +  +M+ +   
Sbjct: 540 DGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGIN 599

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V +++ALI  F + G +  A ++++ M+S G  P+   Y   +KV CQ+  F++A  L
Sbjct: 600 PDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKEL 659

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              M    C P++ T N  +  L    + + A K+     ++  L N    +E
Sbjct: 660 FLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNFAAISE 712



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 194/436 (44%), Gaps = 36/436 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F    SV   L N L ++  +  +  LL ++   G   N      +I S   +G  +   
Sbjct: 143 FAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCD 202

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            I GQ+   G +P+   + +++   +       A   + +M  +   P+   Y+ LIHG+
Sbjct: 203 EIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGV 262

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C +G +DEA+ +  QME     PNV TY+ LIDGF  A  +  A ++   M +   SP+ 
Sbjct: 263 CRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSE 322

Query: 341 VA--------YTCMVK------------------------VLC---QNNMFHQAHSLIEK 365
                     + C+                          +LC     NM  +A +L++K
Sbjct: 323 ATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGALLKK 382

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
                  P++ TFN  +  L     ++    +LD+  +       +TY  L+  L    +
Sbjct: 383 FGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALYMAGK 442

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           V E      ++ K G+  N+ +YN ++   C+  M+ +A     +M  +G   + +TFN 
Sbjct: 443 VTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNT 502

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +I  YCK G++  +  LL  +   G + PDI +++S++ G+C +  +++A     +M+  
Sbjct: 503 LIDGYCKGGEICKSRDLLVMLLEHG-FKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMW 561

Query: 546 GICPNFATWNVLVRSL 561
           G+ PN  T+N+L+ SL
Sbjct: 562 GLSPNAVTYNILIHSL 577



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 119/252 (47%), Gaps = 1/252 (0%)

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LI  + + G      +I+ ++   G SP+   Y  ++  L ++N    A+   ++M+ +N
Sbjct: 188 LIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADN 247

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
           C P+  T+N  I G+C  G VD A++L+ QM+     PN+ TY  L+DG     +V EAF
Sbjct: 248 CKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAF 307

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            ++  ++   +  +  T  + +HGV R     +AF+L  + +     L  +  + ++   
Sbjct: 308 RVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCL 367

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
             +     A  LL +    G   PD  ++   +  +     + E    L + + +G+   
Sbjct: 368 SSKNMAREAGALLKKFGKIGH-KPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFG 426

Query: 551 FATWNVLVRSLF 562
           F+T+  L+++L+
Sbjct: 427 FSTYLALIKALY 438



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 1/148 (0%)

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L + L R   V  + EL+ +I+  G ++N      ++    R G+     ++ G++   G
Sbjct: 153 LANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLG 212

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
                  +N +I A  K   ++ A     ++       PD  +Y  L+ G+C SG + EA
Sbjct: 213 ISPSTRLYNAVIDALVKSNSLDLAYLKFQQM-SADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 536 FIYLQKMLNEGICPNFATWNVLVRSLFS 563
              +++M   G  PN  T+ +L+   F+
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFN 299


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 226/451 (50%), Gaps = 29/451 (6%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E   + F R   +G K +      ++ ALL ENR + +  +Y  M R  ++PNVFT+N++
Sbjct: 170 ELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVV 229

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS 166
           + ALCK  +++ A  ++ +M   GC+P+ VSY T++   CKLG            G+G  
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG------------GNG-- 275

Query: 167 VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQM 226
                        K+ +A  +L EMV+  + PN+ T++ +I       N+  S+ +  +M
Sbjct: 276 -------------KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEM 322

Query: 227 FVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSM 286
             +   PN+ S+ SL+ G   GG+  EA  + ++M+  G  PN++ Y+ LI+G C N  +
Sbjct: 323 LDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDML 382

Query: 287 DEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCM 346
            EA+ +   ++     P    Y+ LID + K G +     +   M   G  P+V  Y C+
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 347 VKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
           +  LC+N     A  L +++  +   P+ VTF+  ++G C  G    A  LL +M +   
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEK-CGIQLNIVTYNTILHGVCRAGMVVEAF 465
            P   TYN ++ G  +   +K A  + T++EK   +++N+ +YN +L G  + G + +A 
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            LL +ML +G   + IT+ I+      QG V
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 212/390 (54%), Gaps = 4/390 (1%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           L+  L KE++  +  ++  EM+ R I PNV T++ +I++LC  G +  +  ++  M V G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 231 CNPNIHSFTSLLKGYL-LGG--RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           C+PN+ S+ +L+ GY  LGG  + ++A  +   M+     PN+  ++ LI G   + ++ 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            ++ V  +M +    PNV +Y++LI+G    G +  A  + ++M+S G  PN++ Y  ++
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
              C+N+M  +A  +   +  +   P T  +N  I   C  G++D    L ++M++   +
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433

Query: 408 PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL 467
           P++ TYN L+ GL R   ++ A +L  ++   G+  ++VT++ ++ G CR G   +A  L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAML 492

Query: 468 LGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGIC 527
           L +M   G K   +T+NI++  YCK+G +  A  +  ++        ++ SY  LL G  
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552

Query: 528 NSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
             G +++A + L +ML +G+ PN  T+ ++
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRITYEIV 582



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M  R   PN+ +F  ++      G+ ++A D+   M   G  PNVV+Y+TLI G C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269

Query: 282 S---NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
               NG M +A +V  +M EN   PN+TT++ LIDGF K  NL G+ +++  M+     P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           NV++Y  ++  LC      +A S+ +KM      PN +T+N  I G C    +  A+ + 
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
             +K    +P    YN L+D   ++ ++ + F L  E+E+ GI  ++ TYN ++ G+CR 
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           G +  A +L  ++  +G   D +TF+I++  YC++G+   A  LL  +   G   P  ++
Sbjct: 450 GNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMG-LKPRHLT 507

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNE-GICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           Y  ++ G C  G ++ A     +M  E  +  N A++NVL++  +S  G L    +L + 
Sbjct: 508 YNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG-YSQKGKLEDANMLLNE 566

Query: 578 MANK 581
           M  K
Sbjct: 567 MLEK 570



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 187/389 (48%), Gaps = 50/389 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI  L E    D V+Y+ ++M    +  +   F  VIN+  + G   +A  +   ++ +G
Sbjct: 195 MIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 61  LKPTVKIYNHILDA---LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVD 117
             P V  YN ++D    L    +    + +   M  + + PN+ T+NIL+    K++ + 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVS----VYNA 170
           G+ K+  EM ++   P+ +SY ++++ +C  G++ EA  ++MR     +GV      YNA
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA--ISMRDKMVSAGVQPNLITYNA 371

Query: 171 LINGLCKEH-----------------------------------KIEEAFWLLCEMVDRG 195
           LING CK                                     KI++ F L  EM   G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I P+V TY+ +I+ LC  GN+E +  +  Q+  +G  P++ +F  L++GY   G + +A+
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAA 490

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME-ENSCPPNVTTYSALIDG 314
            L   M + G  P  + Y+ ++ G C  G++  A ++  QME E     NV +Y+ L+ G
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550

Query: 315 FAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           +++ G L  A+ + N M+  G  PN + Y
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 154/322 (47%), Gaps = 7/322 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLG   ++     +L++M    VS +   F  +I+ + +      ++K+F  + +  +KP
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  YN +++ L    + S    +   M   G++PN+ TYN L+   CKN+ +  A  + 
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKE 178
             +  +G  P    Y  ++ + CKLG++++    +E   R G    V  YN LI GLC+ 
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             IE A  L  ++  +G+ P+++T+  ++   C  G    +  +L +M   G  P   ++
Sbjct: 450 GNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLP-NVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
             ++KGY   G    A+++  +M +E  L  NV +Y+ L+ G    G +++A  +  +M 
Sbjct: 509 NIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568

Query: 298 ENSCPPNVTTYSALIDGFAKAG 319
           E    PN  TY  + +     G
Sbjct: 569 EKGLVPNRITYEIVKEEMVDQG 590



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 142/289 (49%), Gaps = 5/289 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +   + G   + ++M  + V  +   + S+IN     G   +A+ M  ++   G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P +  YN +++     +       ++ ++K  G  P    YN+L+ A CK  ++D  +
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGF 421

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS----GVSVYNALINGLC 176
            L  EM  +G  PD  +Y  +++ +C+ G +E A++L  +  S     +  ++ L+ G C
Sbjct: 422 ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYC 481

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV-RGCNPNI 235
           ++ +  +A  LL EM   G+ P  +TY+ ++   C  GN++ +  +  QM   R    N+
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
            S+  LL+GY   G+  +A+ L N M+ +G +PN + Y  +   +   G
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 81/158 (51%), Gaps = 4/158 (2%)

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
           +R +  FE        G +L+ ++   ++  + +     +   +  +M+    + +  TF
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTF 226

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG---MQEAFIYLQ 540
           N++I A CK GK+N A  +++ ++  G  +P+++SY +L+ G C  GG   M +A   L+
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYG-CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285

Query: 541 KMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           +M+   + PN  T+N+L+   + +    G + +  +++
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 2/144 (1%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           I+  + L  Q+  +G+      F  ++  Y R G + +A  +   + + GLKP    YN 
Sbjct: 452 IEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 71  ILDALLAENRFSMINPIYSNMKRDG-MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           ++     E        + + M+++  +  NV +YN+LL+   +  +++ A  LL EM  K
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 130 GCAPDAVSYTTIVSSICKLGQVEE 153
           G  P+ ++Y  +   +   G V +
Sbjct: 571 GLVPNRITYEIVKEEMVDQGFVPD 594


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 209/403 (51%), Gaps = 9/403 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMK--VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           KL      D V+ L+  ++     + C E +FI ++ +Y   G  E ++++F RI +FG+
Sbjct: 92  KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGV 151

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAY 120
           K +V+  N +L+ L+   RF +++ ++ N K   G+ PN+FT N+L+KALCK N ++ AY
Sbjct: 152 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 211

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           K+L E+ + G  P+ V+YTTI+      G +E A+      L   +    + Y  L++G 
Sbjct: 212 KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +  EA  ++ +M    I+PN +TY  +I +LC       +  +  +M  R   P+ 
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                ++       +  EA  LW +M++   +P+    STLIH LC  G + EA  +  +
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            E+ S  P++ TY+ LI G  + G L  A ++W+ M    C PN   Y  +++ L +N  
Sbjct: 392 FEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGN 450

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
             +   ++E+M    C PN  TF    +GL   G+ + AMK++
Sbjct: 451 VKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 201/427 (47%), Gaps = 13/427 (3%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK----GCAPDAVSYTTIV 142
           +Y+     G   N  TY+ +L  L +    D    L+ ++ N      C  +   +  ++
Sbjct: 70  LYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENL--FIDLL 127

Query: 143 SSICKLGQVEEARELAMR---FGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDR-GI 196
            +    G+ E +  + +R   FG   SV   N L+N L +  + +    +     +  GI
Sbjct: 128 RNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGI 187

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
            PN+ T + ++ +LC   ++E++  +L ++   G  PN+ ++T++L GY+  G    A  
Sbjct: 188 TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKR 247

Query: 257 LWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFA 316
           +   M+  G+ P+   Y+ L+ G C  G   EA +V   ME+N   PN  TY  +I    
Sbjct: 248 VLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307

Query: 317 KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           K      A  +++ M+     P+      ++  LC+++   +A  L  KM   NC P+  
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367

Query: 377 TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
             +T I  LC  GRV  A KL D+ ++   +P++ TYN L+ G+     + EA  L  ++
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426

Query: 437 EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
            +   + N  TYN ++ G+ + G V E  ++L +ML  G   +  TF I+     K GK 
Sbjct: 427 YERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKE 486

Query: 497 NNAIQLL 503
            +A++++
Sbjct: 487 EDAMKIV 493



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 169/389 (43%), Gaps = 9/389 (2%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS----FTSLLKGYLLGGR 250
           G   N  TY +I+  L      +    ++  +  R   P I      F  LL+ Y L GR
Sbjct: 78  GFTHNYDTYHSILFKLSRARAFDPVESLMADL--RNSYPPIKCGENLFIDLLRNYGLAGR 135

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTYS 309
              +  ++ R+   G   +V + +TL++ L  N   D   ++    +E+    PN+ T +
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+    K  ++  A ++ + + S G  PN+V YT ++           A  ++E+M   
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+  T+   + G C  GR   A  ++D M++ E  PN  TY  ++  L +  +  EA
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 315

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             +  E+ +     +      ++  +C    V EA  L  KML      D    + +I+ 
Sbjct: 316 RNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 375

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            CK+G+V  A +L D    G    P +++Y +L+ G+C  G + EA      M      P
Sbjct: 376 LCKEGRVTEARKLFDEFEKGS--IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIM 578
           N  T+NVL+  L  N      V +L++++
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEML 462



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 146/297 (49%), Gaps = 6/297 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K +I+    +L ++   G+  +   + +++  Y   G  E A ++   + + G
Sbjct: 197 LVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 256

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  ++D      RFS    +  +M+++ +EPN  TY ++++ALCK  +   A 
Sbjct: 257 WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            +  EM  +   PD+     ++ ++C+  +V+EA     + L        ++ + LI+ L
Sbjct: 317 NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++ EA  L  E  ++G  P+++TY+T+I+ +C+ G +  +  +   M+ R C PN 
Sbjct: 377 CKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNA 435

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++  L++G    G   E   +   M+  G  PN   +  L  GL   G  ++A+ +
Sbjct: 436 FTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 142/325 (43%), Gaps = 19/325 (5%)

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L+ +L  G++H            GF  N   Y +++  L    + D   S+   +  NS 
Sbjct: 66  LQIFLYAGKSHP-----------GFTHNYDTYHSILFKLSRARAFDPVESLMADLR-NSY 113

Query: 302 PPNVTTYSALID---GFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           PP     +  ID    +  AG    + +I+ R+   G   +V +   ++ VL QN  F  
Sbjct: 114 PPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDL 173

Query: 359 AHSLIE--KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            H++ +  K +F    PN  T N  +K LC    ++ A K+LD++     +PN+ TY  +
Sbjct: 174 VHAMFKNSKESF-GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTI 232

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L G +    ++ A  ++ E+   G   +  TY  ++ G C+ G   EA  ++  M     
Sbjct: 233 LGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEI 292

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + + +T+ ++I A CK+ K   A  + D +     + PD      ++  +C    + EA 
Sbjct: 293 EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS-FMPDSSLCCKVIDALCEDHKVDEAC 351

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
              +KML     P+ A  + L+  L
Sbjct: 352 GLWRKMLKNNCMPDNALLSTLIHWL 376


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 268/546 (49%), Gaps = 19/546 (3%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F S+++ Y ++G  + A   F  + + GL P+V  +N +++ L      +    + S+M 
Sbjct: 238 FNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN 297

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G+EP+  TYNIL K       + GA++++ +M +KG +PD ++YT ++   C+LG ++
Sbjct: 298 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 357

Query: 153 EARELAMRFGSGVSVYNALI------NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
               L     S     N++I      +GLCK  +I+EA  L  +M   G+ P+++ YS +
Sbjct: 358 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 417

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I  LC +G  + +L +  +M  +   PN  +  +LL G    G   EA  L + +I  G 
Sbjct: 418 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE 477

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             ++V Y+ +I G   +G ++EA+ +   + E    P+V T+++LI G+ K  N+  A +
Sbjct: 478 TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARK 537

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           I + +   G +P+VV+YT ++              L  +M  E  PP  VT++   KGLC
Sbjct: 538 ILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC 597

Query: 387 ------GCGRV------DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
                  C  V      +   + L  M+     P+  TYN ++  L RV  +  AF  + 
Sbjct: 598 RGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLE 657

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
            ++   +  +  TYN ++  +C  G + +A   +  +  +   L    +  +I A+C +G
Sbjct: 658 IMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKG 717

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
               A++L  ++   G +N  I  Y++++  +C    + E+  +   ML++GI P+    
Sbjct: 718 DPEMAVKLFHQLLHRG-FNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLDIC 776

Query: 555 NVLVRS 560
            V+++S
Sbjct: 777 EVMIKS 782



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 262/557 (47%), Gaps = 37/557 (6%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D   Y+L++MK + ++ S   + SV+  +R         KM+   +E   K     Y+ 
Sbjct: 153 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD------KMWDVYKEIKDKNE-HTYST 205

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L  + +           +   + P+V ++N ++   CK   VD A      +   G
Sbjct: 206 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 265

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAF 185
             P   S+  +++ +C +G + EA ELA      GV      YN L  G      I  A+
Sbjct: 266 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 325

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN-IHSFTSLLKG 244
            ++ +M+D+G+ P+VITY+ ++   C +GN++  L +L  M  RG   N I   + +L G
Sbjct: 326 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 385

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  EA  L+N+M  +G  P++VAYS +IHGLC  G  D A+ +  +M +    PN
Sbjct: 386 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 445

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             T+ AL+ G  + G LL A  + + +IS+G + ++V Y  ++    ++    +A  L +
Sbjct: 446 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 505

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +      P+  TFN+ I G C    +  A K+LD +K Y   P++ +Y  L+D      
Sbjct: 506 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 565

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             K   EL  E++  GI    VTY+ I  G+CR         +L + + E          
Sbjct: 566 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK--------- 616

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
                 CKQG       L D    G    PD I+Y +++  +C    +  AF++L+ M +
Sbjct: 617 ------CKQG-------LRDMESEG--IPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 661

Query: 545 EGICPNFATWNVLVRSL 561
             +  + AT+N+L+ SL
Sbjct: 662 RNLDASSATYNILIDSL 678



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 243/502 (48%), Gaps = 10/502 (1%)

Query: 71  ILDALLAEN---RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           IL+ LL E      S +  + SN  R   E     +++LL    +   VD +  +L +M 
Sbjct: 106 ILEQLLQEEGSGSASRLCELLSNSFRK-WESTGLVWDMLLFLSSRLRMVDDSLYILKKMK 164

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
           ++       SY +++    +  ++ +  +E+  +       Y+ +++GLC++ K+E+A  
Sbjct: 165 DQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVL 221

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
            L     + I P+V+++++I+S  C +G V+ +      +   G  P+++S   L+ G  
Sbjct: 222 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 281

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
           L G   EA +L + M + G  P+ V Y+ L  G    G +  A  V   M +    P+V 
Sbjct: 282 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVI 341

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPN-VVAYTCMVKVLCQNNMFHQAHSLIEK 365
           TY+ L+ G  + GN+     +   M+S G   N ++  + M+  LC+     +A SL  +
Sbjct: 342 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ 401

Query: 366 MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
           M  +   P+ V ++  I GLC  G+ D A+ L D+M     LPN  T+  LL GL +   
Sbjct: 402 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 461

Query: 426 VKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNI 485
           + EA  L+  +   G  L+IV YN ++ G  ++G + EA +L   ++  G      TFN 
Sbjct: 462 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNS 521

Query: 486 IIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNE 545
           +IY YCK   +  A ++LD I+  G   P ++SYT+L+    N G  +      ++M  E
Sbjct: 522 LIYGYCKTQNIAEARKILDVIKLYG-LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 580

Query: 546 GICPNFATWNVLVRSLFSNLGH 567
           GI P   T++V+ + L     H
Sbjct: 581 GIPPTNVTYSVIFKGLCRGWKH 602



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 151/297 (50%), Gaps = 10/297 (3%)

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D+++ +  +M++ +   +  +Y++++  F +        ++W+ +       N   Y+ 
Sbjct: 153 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRET------DKMWD-VYKEIKDKNEHTYST 205

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V  LC+      A   +    +++  P+ V+FN+ + G C  G VD A      + +  
Sbjct: 206 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 265

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +P++ ++N L++GL  V  + EA EL +++ K G++ + VTYN +  G    GM+  A+
Sbjct: 266 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 325

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLW 524
           +++  ML +G   D IT+ I++   C+ G ++  + LL D +  G E N  II  + +L 
Sbjct: 326 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS-IIPCSVMLS 384

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           G+C +G + EA     +M  +G+ P+   +++++  L   LG       L D M +K
Sbjct: 385 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL-CKLGKFDMALWLYDEMCDK 440


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 245/500 (49%), Gaps = 31/500 (6%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  +N IL +L+     S    ++  M+ +G+  + FT+NIL+    +      ++ +
Sbjct: 68  PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIE 182
             ++  KG  P+A+++                              N LI GLC +  I 
Sbjct: 128 FGKILKKGFDPNAITF------------------------------NTLIKGLCLKGHIH 157

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +A     ++V +G   + ++Y T+I+ LC VG +  +L +L ++  +   PN   +  ++
Sbjct: 158 QALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMII 217

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                    ++A DL+++M+ +   P+    ++LI+G C  G + EAV + ++M   +  
Sbjct: 218 DNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENIN 277

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P + T+S L+D F K G +  A  +    +      +VV Y  ++   C     ++A  +
Sbjct: 278 PRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDI 337

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            + MA      N  ++ T I GLC    VD A+ L ++M+  + +PN+ TYN L+DGL +
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGK 397

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
           + ++    +LV E+   G   NI+TYN+IL  +C+   V +A  LL  +  +G + D  T
Sbjct: 398 LGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYT 457

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           + ++I   C+ GK+ +A ++ + +   G +N D+ +YT ++ G C  G    A   L KM
Sbjct: 458 YTVLIKGLCQSGKLEDAQKVFEDLLVKG-YNLDVYTYTVMIQGFCVKGLFDAALALLSKM 516

Query: 543 LNEGICPNFATWNVLVRSLF 562
            + G  PN  T+ +++ SLF
Sbjct: 517 EDNGCIPNAKTYEIVILSLF 536



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/499 (27%), Positives = 242/499 (48%), Gaps = 40/499 (8%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L QQM++ G+      F  +IN + ++GL   +  +F +I + G  P    +N ++  L 
Sbjct: 92  LHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLC 151

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +         +  +   G   +  +Y  L+  LCK  R+  A +LL  +  K   P+AV
Sbjct: 152 LKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAV 211

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y  I+ ++CK   V +A +L     A R        N+LI G C   +++EA  LL +M
Sbjct: 212 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKM 271

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +   I+P + T+S ++ + C  G V+ +  +LG    +    ++ ++ SL+ GY L    
Sbjct: 272 ILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEI 331

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           ++A D+++ M   G + NV +Y+T+I+GLC    +DEAV++  +M      PNV TY++L
Sbjct: 332 NKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSL 391

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           IDG  K G +                      +C++K             L+++M     
Sbjct: 392 IDGLGKLGKI----------------------SCVLK-------------LVDEMHDRGQ 416

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
           PPN +T+N+ +  LC    VD A+ LL  +K     P++ TY  L+ GL +  ++++A +
Sbjct: 417 PPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQK 476

Query: 432 LVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYC 491
           +  ++   G  L++ TY  ++ G C  G+   A  LL KM   G   +A T+ I+I +  
Sbjct: 477 VFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLF 536

Query: 492 KQGKVNNAIQLLDRIRGGG 510
           ++ + + A +LL  +   G
Sbjct: 537 EKDENDMAEKLLREMIARG 555



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 200/404 (49%), Gaps = 3/404 (0%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F S +S+Y+ L +   +E+ +  +F  L     +   P +I ++ I+SSL    +  T+L
Sbjct: 33  FPSSISLYSQLHHHQDEENNLISSFNSLLH--HKNPTPPIIQFNKILSSLVKAKHHSTAL 90

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +  QM + G   +  +F  L+  +   G    +  ++ +++++GF PN + ++TLI GL
Sbjct: 91  SLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGL 150

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G + +A++   ++       +  +Y  LI+G  K G +  A Q+  R+      PN 
Sbjct: 151 CLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNA 210

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V Y  ++  +C+  + + A  L  +M  +   P+  T N+ I G C  G++  A+ LL +
Sbjct: 211 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHK 270

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M      P + T++ L+D   +  +VKEA  ++    K  I L++VTYN+++ G C    
Sbjct: 271 MILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKE 330

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
           + +A  +   M   G   +  ++  +I   CK   V+ A+ L + +R   +  P++++Y 
Sbjct: 331 INKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCR-KIIPNVVTYN 389

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           SL+ G+   G +      + +M + G  PN  T+N ++ +L  N
Sbjct: 390 SLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKN 433



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 5/226 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           EI+  + +   M   GV  +   + ++IN   ++ + ++A+ +F  +R   + P V  YN
Sbjct: 330 EINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYN 389

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++D L    + S +  +   M   G  PN+ TYN +L ALCKN+ VD A  LL  + ++
Sbjct: 390 SLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQ 449

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEA 184
           G  PD  +YT ++  +C+ G++E+A++     L   +   V  Y  +I G C +   + A
Sbjct: 450 GIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAA 509

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
             LL +M D G  PN  TY  +I SL +    + +  +L +M  RG
Sbjct: 510 LALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARG 555


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 205/384 (53%), Gaps = 7/384 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MIEKL +    + ++ L+ Q+    + C E +FI+VI +Y   G  + A++ F RI  FG
Sbjct: 141 MIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFG 200

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSN-MKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           L+P+V+ +N +L+ L+   RF +++ ++ N  K+ G+ PNVFT NIL+KALCK N +D A
Sbjct: 201 LQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAA 260

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALING 174
            ++L EM   G  P+ V+YTTI+      G +  AR      L   +    + Y  L++G
Sbjct: 261 IRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDG 320

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
            CK+ +  +A  ++ EM +  ++PN +TY  II + C        L +L  M  +   P+
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
                 ++      G+   A +LW +++++   P+    STLIH LC  G + EA  +  
Sbjct: 381 SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFD 440

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           + E+ S P  + TY+ALI G  + G L  A+++W+ M+  GC PN   Y  ++K  C+  
Sbjct: 441 EFEKGSIPSTL-TYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVG 499

Query: 355 MFHQAHSLIEKMAFENCPPNTVTF 378
              +   ++E+M    C PN  T+
Sbjct: 500 NAREGIRVMEEMLDNGCLPNKATY 523



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 198/436 (45%), Gaps = 18/436 (4%)

Query: 133 PDAVSYTTIVSSICK-------LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAF 185
           P  +S   +VS I +       L   + A +    F      Y A+I  L K    E   
Sbjct: 96  PQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPME 155

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
            L+ ++    I      + T+I +    G  + ++    ++   G  P++ SF +LL   
Sbjct: 156 TLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTL 215

Query: 246 LLGGRTHEASDLWNRMIRE-----GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           +   R     DL + M +      G +PNV   + L+  LC    +D A+ V  +M    
Sbjct: 216 VQNKRF----DLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMG 271

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
             PNV TY+ ++ G+   G+++GA +++  ++  G  P+   YT ++   C+   F  A 
Sbjct: 272 FIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAV 331

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            ++++M      PN VT+   I+  C   +    + LLD M + + +P+      ++D L
Sbjct: 332 KVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDML 391

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
               +V+ A EL  ++ K     +    +T++H +C+ G V EA +L  +   +G+    
Sbjct: 392 CEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FEKGSIPST 450

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
           +T+N +I   C+ G++  A +L D +   G   P+  +Y  L+ G C  G  +E    ++
Sbjct: 451 LTYNALIAGMCEGGELPEAARLWDNMVEKG-CVPNAFTYNMLIKGFCKVGNAREGIRVME 509

Query: 541 KMLNEGICPNFATWNV 556
           +ML+ G  PN AT+ +
Sbjct: 510 EMLDNGCLPNKATYAI 525



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 39/282 (13%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRM--ISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
           P   +   ++   ++  NL  A QI++         + N   Y  M++ L +   F    
Sbjct: 96  PQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPME 155

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           +LI ++           F T I+     GR   A++   ++  +   P++ ++N LL+ L
Sbjct: 156 TLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSVRSFNTLLNTL 215

Query: 421 LRVNRVKEAFELVTEIEK-CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           ++  R    F+LV  + K C  +  IV                                +
Sbjct: 216 VQNKR----FDLVHLMFKNCRKKFGIVP-------------------------------N 240

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
             T NI++ A CK+  ++ AI++L+ +   G + P++++YT++L G  + G M  A    
Sbjct: 241 VFTCNILVKALCKKNDIDAAIRVLEEMPAMG-FIPNVVTYTTILGGYVSKGDMVGARRVF 299

Query: 540 QKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            ++L+ G  P+  T+ +L+         +  V ++D++  N+
Sbjct: 300 GEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENR 341


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/547 (25%), Positives = 271/547 (49%), Gaps = 14/547 (2%)

Query: 29  SEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL---AENRFSMIN 85
           S+ +F   +++Y   G    AL++F ++    LKP +   N +L  L+   +    S   
Sbjct: 130 SKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAR 189

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK-GCAPDAVSYTTIVSS 144
            ++ +M + G+  NV T+N+L+   C   +++ A  +L  M ++    PD V+Y TI+ +
Sbjct: 190 EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKA 249

Query: 145 ICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           + K G++ + +EL +       V     YN L+ G CK   ++EAF ++  M    + P+
Sbjct: 250 MSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD 309

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           + TY+ +I+ LC+ G++   L ++  M      P++ ++ +L+ G    G + EA  L  
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVS--VSYQMEENSCPPNVTTYSALIDGFAK 317
           +M  +G   N V ++  +  LC      EAV+  V   ++ +   P++ TY  LI  + K
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKR-EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G+L GA ++   M   G   N +    ++  LC+     +AH+L+          + VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + T I G     +V+ A+++ D+MK+ +  P ++T+N L+ GL    + + A E   E+ 
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
           + G+  +  T+N+I+ G C+ G V +AF+   + +    K D  T NI++   CK+G   
Sbjct: 549 ESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE 608

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            A+   + +    E   D ++Y +++   C    ++EA+  L +M  +G+ P+  T+N  
Sbjct: 609 KALNFFNTLI--EEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666

Query: 558 VRSLFSN 564
           +  L  +
Sbjct: 667 ISLLMED 673



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 262/555 (47%), Gaps = 34/555 (6%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYR-IREFGLKPTVKIYN 69
           I   + +   M   GVS +   F  ++N Y   G  E AL M  R + EF + P    YN
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL A+  + R S +  +  +MK++G+ PN  TYN L+   CK   +  A++++  M   
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE-E 183
              PD  +Y  +++ +C  G + E  EL     +++    V  YN LI+G C E  +  E
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLE 363

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMF-VRGCNPNIHSFTSLL 242
           A  L+ +M + G+  N +T++  +  LC     E     + ++  + G +P+I ++ +L+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
           K YL  G    A ++   M ++G   N +  +T++  LC    +DEA ++     +    
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +  TY  LI GF +   +  A ++W+ M     +P V  +  ++  LC +     A   
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            +++A     P+  TFN+ I G C  GRV+ A +  ++  ++   P+  T N LL+GL +
Sbjct: 544 FDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCK 603

Query: 423 VNRVKEAFELV-TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
               ++A     T IE+   +++ VTYNT++   C+   + EA+ LL +M  +G + D  
Sbjct: 604 EGMTEKALNFFNTLIEER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRG----------------------GGEWNPDIISY 519
           T+N  I    + GK++   +LL +  G                        E N + I+Y
Sbjct: 662 TYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAY 721

Query: 520 TSLLWGICNSGGMQE 534
           + ++  +C+ G ++E
Sbjct: 722 SDVIDELCSRGRLKE 736



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 173/342 (50%), Gaps = 12/342 (3%)

Query: 232 NPNIHS--------FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC-- 281
           +PN+H         F   L  YL  G+ H A  ++ +MIR    PN++  +TL+ GL   
Sbjct: 120 HPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRY 179

Query: 282 -SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN-GCSPN 339
            S+ S+  A  V   M +     NV T++ L++G+   G L  A  +  RM+S    +P+
Sbjct: 180 PSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPD 239

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
            V Y  ++K + +         L+  M      PN VT+N  + G C  G +  A ++++
Sbjct: 240 NVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
            MKQ   LP++ TYN L++GL     ++E  EL+  ++   +Q ++VTYNT++ G    G
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
           + +EA +L+ +M  +G K + +T NI +   CK+ K     + +  +     ++PDI++Y
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419

Query: 520 TSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            +L+      G +  A   +++M  +GI  N  T N ++ +L
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 17/298 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L ++ ++D    LL      G    E  + ++I  + R    E+AL+M+  +++  
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV  +N ++  L    +  +    +  +   G+ P+  T+N ++   CK  RV+ A+
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSVYNALINGLC 176
           +   E       PD  +   +++ +CK G  E+A      L          YN +I+  C
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFC 636

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           K+ K++EA+ LL EM ++G++P+  TY++ IS L + G +  +  +L +   +       
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK------- 689

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
            F S+ +   +    + A+       +E      +AYS +I  LCS G + E  S SY
Sbjct: 690 -FGSMKRDLQVETEKNPATS----ESKEELNTEAIAYSDVIDELCSRGRLKEH-SRSY 741


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 231/432 (53%), Gaps = 12/432 (2%)

Query: 153 EARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           EA + A  +G  +SV   N L++GL K  +I +  ++  EM+ R I+P +I+++ +I+ L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL-LG--GRTHEASDLWNRMIREGFL 267
           C VG +  +  I+  M VRG + N+ ++ +L+ GY  +G  G+ ++A  +   M  +G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN V ++ LI G C + ++  A+ V  +M      PNV TY++LI+G    G +  A+ +
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
            ++M+++   PN++ +  ++   C+N M  QA  L + M  +   PN  T+N  I   C 
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
              ++ A  L   M      P+++TYN L+ GL R   ++ A  LV+E++   ++ +++T
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN ++  +C  G + +A +LL +M  +G K   +T+N +I  YCK+G +  A+ L  ++ 
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME 473

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN--- 564
             G    ++ +Y  L+ G C    +++A   L +ML +G+ PN  T+ ++   +      
Sbjct: 474 KVGRL-ANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532

Query: 565 ---LGHLGPVYI 573
               GHL  V +
Sbjct: 533 PDIEGHLYKVAV 544



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 219/410 (53%), Gaps = 8/410 (1%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G++ +V + N L+  L K   +     +  EM  +   P  +S+  +++ +CK+G++ +A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 155 ----RELAMR-FGSGVSVYNALINGLCKEHKIEEAF---WLLCEMVDRGIDPNVITYSTI 206
                ++ +R   + V  YN LI+G CK  KI + +    +L EM   GI PN +T++ +
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C   NV  ++ +  +M  +G  PN+ ++ SL+ G    G+ +EA+ L ++M+    
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN++ ++ L++G C N  + +A  +   M +    PNVTTY+ LID + K  N+  A  
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFA 362

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M+  G  P+V  Y C++  LC+      A +L+ +M  ++   + +T+N  I  LC
Sbjct: 363 LYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLC 422

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G +  A++LLD+M +    P+  TYN ++DG  +   ++ A  L +++EK G   N+ 
Sbjct: 423 NKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVA 482

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKV 496
           TYN ++ G C+   + +A  LL +ML +G   + +T+ I+     ++G V
Sbjct: 483 TYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 235/454 (51%), Gaps = 12/454 (2%)

Query: 21  MKVEGVS-CSEGVFISVIN-SYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           + V G S C+  + + ++  +Y +        + F R  ++GLK +V   N ++  L+  
Sbjct: 82  LSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKV 141

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                +  +Y  M R  +EP + ++NI++  LCK  +++ A  ++ +M  +G + + ++Y
Sbjct: 142 GEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITY 201

Query: 139 TTIVSSICKLGQV-----EEARELAMRFGSGVS----VYNALINGLCKEHKIEEAFWLLC 189
            T++   CK+G++      +A    MR   G+      +N LI+G CK+  +  A  +  
Sbjct: 202 NTLIDGYCKMGKIGKMYKADAILKEMR-ADGICPNEVTFNILIDGFCKDKNVSAAMKVFA 260

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           EM  +G+ PNV+TY+++I+ LC+ G V  +  +  QM      PNI +  +LL G+    
Sbjct: 261 EMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNK 320

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +A +L++ M ++G  PNV  Y+ LI   C + +M++A ++   M      P+V+TY+
Sbjct: 321 MVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYN 380

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            LI G  + G+L  A  + + M +     +++ Y  ++  LC      +A  L+++M  +
Sbjct: 381 CLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK 440

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ +T+NT I G C  G +  A+ L  QM++   L N+ TYN L+ G  + +++++A
Sbjct: 441 GLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDA 500

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVE 463
             L+ E+ + G+  N +TY  +   +   G V +
Sbjct: 501 NGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 218/421 (51%), Gaps = 8/421 (1%)

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           D    N    +IL+ A  KN R    ++      + G      S   ++S + K+G++ +
Sbjct: 87  DSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGD 146

Query: 154 -----ARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                   +  R    +  +N +INGLCK  K+ +A  ++ +M  RG+  NVITY+T+I 
Sbjct: 147 MEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLID 206

Query: 209 SLCDVGNVET---SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
             C +G +     +  IL +M   G  PN  +F  L+ G+        A  ++  M R+G
Sbjct: 207 GYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQG 266

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             PNVV Y++LI+GLC+NG ++EA ++  QM  +   PN+ T++AL++GF K   +  A 
Sbjct: 267 VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAG 326

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++++ M   G +PNV  Y  ++   C++     A +L   M  +   P+  T+N  I GL
Sbjct: 327 ELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGL 386

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C  G ++ A  L+ +M       ++ TYN L+D L     +K+A  L+ E+ + G++ + 
Sbjct: 387 CRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ 446

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TYNT++ G C+ G +  A  L  +M   G   +  T+N++I  +CK+ K+ +A  LL+ 
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNE 506

Query: 506 I 506
           +
Sbjct: 507 M 507



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 185/359 (51%), Gaps = 8/359 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSY---RRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           +++ MKV GVS +   + ++I+ Y    ++G   +A  +   +R  G+ P    +N ++D
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               +   S    +++ M R G++PNV TYN L+  LC N +V+ A  L  +M N    P
Sbjct: 245 GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304

Query: 134 DAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           + +++  +++  CK   V++A EL            V+ YN LI+  CK+  +E+AF L 
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
             M+ +G+ P+V TY+ +I+ LC  G++E +  ++ +M  +    ++ ++  L+      
Sbjct: 365 RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424

Query: 249 GRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
           G   +A  L + M R+G  P+ + Y+T+I G C  G++  A+++  QME+     NV TY
Sbjct: 425 GEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATY 484

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           + LI GF K   L  A+ + N M+  G  PN + Y  + + + +          + K+A
Sbjct: 485 NVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVA 543



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 168/321 (52%), Gaps = 5/321 (1%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G+  ++     +L++M+ +G+  +E  F  +I+ + +      A+K+F  +   G+KP
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
            V  YN +++ L    + +    +   M    ++PN+ T+N LL   CKN  V  A +L 
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-AMRFGSG----VSVYNALINGLCKE 178
            +M  +G  P+  +Y  ++ + CK   +E+A  L  +  G G    VS YN LI GLC++
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389

Query: 179 HKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             +E A  L+ EM  + +  ++ITY+ +I SLC+ G ++ +L +L +M  +G  P+  ++
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            +++ GY   G    A +L ++M + G L NV  Y+ LI G C    +++A  +  +M E
Sbjct: 450 NTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLE 509

Query: 299 NSCPPNVTTYSALIDGFAKAG 319
               PN  TY  + +   + G
Sbjct: 510 KGLIPNRMTYEIVTEEMMEKG 530



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 76/137 (55%), Gaps = 4/137 (2%)

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
           R +  FE        G++L++ + N ++ G+ + G + +   +  +M+    +   I+FN
Sbjct: 108 RTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFN 167

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS---GGMQEAFIYLQK 541
           I+I   CK GK+N A  +++ ++  G  + ++I+Y +L+ G C     G M +A   L++
Sbjct: 168 IVINGLCKVGKLNKAGDIIEDMKVRG-VSANVITYNTLIDGYCKMGKIGKMYKADAILKE 226

Query: 542 MLNEGICPNFATWNVLV 558
           M  +GICPN  T+N+L+
Sbjct: 227 MRADGICPNEVTFNILI 243



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 77/153 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L  K +++  + L+ +M  + +      +  +I+S    G  ++AL++   +   G
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           LKP+   YN ++D    E        + S M++ G   NV TYN+L+K  CK ++++ A 
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDAN 501

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
            LL EM  KG  P+ ++Y  +   + + G V +
Sbjct: 502 GLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/441 (30%), Positives = 230/441 (52%), Gaps = 24/441 (5%)

Query: 98  PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
           PN  TYN+L++  CK  ++  A  +  +M + G  P+A +  T++  +C++GQ+  A +L
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 158 AMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD 212
                +G      + +N L+ G     +  E F    EM   G++P++ +Y  ++S+L D
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGRAIEFFK---EMKASGVEPDLESYHILLSALSD 139

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
            G +  +  +   M    C+P+I ++  L+ GY   G+T+EA  L   +++ G+ PNV  
Sbjct: 140 SGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFT 196

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           YS +I+  C    ++EA  V  +M E++C PN  T++ LI GF KAG L  A +++  M 
Sbjct: 197 YSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME 256

Query: 333 SNGCSPNVVAYTCMVKVLCQNN-MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
             GC   +V Y  ++  LC+     + A  L  K+      P  VT+N+ I+G     R 
Sbjct: 257 KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERA 314

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTI 451
           +  ++LL  M    C P++ TYN L+ GL   NRV++A  L   +       N+ T+N +
Sbjct: 315 NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFL 371

Query: 452 LHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGG 510
           + G+C    V EA  +L +M    T  D  TFN II A+CK G +++A +++ D ++ G 
Sbjct: 372 IRGLCAQKKVEEARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHG- 426

Query: 511 EWNPDIISYTSLLWGICNSGG 531
            + P+  +  +L  GI +S G
Sbjct: 427 -FYPNTYTTYALAHGIQSSKG 446



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/444 (29%), Positives = 209/444 (47%), Gaps = 48/444 (10%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           LA  F      YN LI G CK  ++ +A  +  +M   G+ PN  T +T++  LC++G +
Sbjct: 17  LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQM 76

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
            ++L +  +M      P   S   LL+G+ + GR   A + +  M   G  P++ +Y  L
Sbjct: 77  SSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHIL 133

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           +  L  +G M EA ++   M   +C P++ TY+ L+DG+ K G    A  +   ++  G 
Sbjct: 134 LSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 190

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
            PNV  Y+ ++   C+ +   +A  +  KM   NC PN VTFNT I G C  G ++ A+K
Sbjct: 191 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 250

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           L  +M++  C   I TYN L+D L +    V  A +L  ++E  G+   IVTYN+++ G 
Sbjct: 251 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 310

Query: 456 C-RAGMVVEAFQLLGKMLIEGTKLDAI--------------------------------T 482
             RA    +  +LL  M  EG K D I                                T
Sbjct: 311 SERAN---DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNVTT 367

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           FN +I   C Q KV  A  +LDR+       PD+ ++ +++   C +G M +A   ++ M
Sbjct: 368 FNFLIRGLCAQKKVEEARNILDRMTA-----PDMTTFNTIILAFCKAGAMHDAREVMKDM 422

Query: 543 LNEGICPNFATWNVLVRSLFSNLG 566
           L  G  PN  T   L   + S+ G
Sbjct: 423 LKHGFYPNTYTTYALAHGIQSSKG 446



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 207/444 (46%), Gaps = 44/444 (9%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           +QAL++F  +      P    YN ++       +      ++S+MK  G+ PN  T N L
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 107 LKALCKNNRVDGAYKL--------------------------------LVEMGNKGCAPD 134
           L  LC+  ++  A KL                                  EM   G  PD
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVEPD 126

Query: 135 AVSYTTIVSSICKLGQVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
             SY  ++S++   G++ EA  L  AM     +  YN L++G CK  +  EA  L+ E++
Sbjct: 127 LESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEIL 186

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G +PNV TYS II+  C +  VE +  +  +M    C PN  +F +L+ G+   G   
Sbjct: 187 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 246

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSN-GSMDEAVSVSYQMEENSCPPNVTTYSAL 311
           +A  L+  M + G    +V Y+TLI  LC   G +  AV +  ++E     P + TY++L
Sbjct: 247 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSL 306

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I GF++  N     ++   M + GC P+V+ Y C++  LC  N    A  L   MA   C
Sbjct: 307 IQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---C 361

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
            PN  TFN  I+GLC   +V+ A  +LD+M      P++TT+N ++    +   + +A E
Sbjct: 362 APNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDARE 417

Query: 432 LVTEIEKCGIQLNIVTYNTILHGV 455
           ++ ++ K G   N  T   + HG+
Sbjct: 418 VMKDMLKHGFYPNTYTTYALAHGI 441



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 170/351 (48%), Gaps = 40/351 (11%)

Query: 247 LGGRTH-EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
           +  R H +A  L+  ++   F PN   Y+ LI G C  G M +AVSV   M+ +   PN 
Sbjct: 1   MSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNA 60

Query: 306 TTYSALIDGFAKAGNLLGASQI--------------------------------WNRMIS 333
           +T + L+ G  + G +  A ++                                +  M +
Sbjct: 61  STMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKA 120

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           +G  P++ +Y  ++  L  +    +AH+L   M    C P+ +T+N  + G C  G+   
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYE 177

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A  L+ ++ +    PN+ TY+ +++   ++++V+EA+E+  ++ +     N VT+NT++ 
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ-GKVNNAIQLLDRIRGGGEW 512
           G C+AGM+ +A +L  +M   G K   +T+N +I + CK+ G V  A+ L +++ G G  
Sbjct: 238 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAG-L 296

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            P I++Y SL+ G   S    +    L  M  EG  P+  T+N L+  L S
Sbjct: 297 TPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCS 345



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 167/338 (49%), Gaps = 47/338 (13%)

Query: 41  RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK-------- 92
           R   +A +A++ F  ++  G++P ++ Y+ +L AL    R +  + ++S M         
Sbjct: 103 RGFFMAGRAIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTY 162

Query: 93  ------------------------RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
                                   + G EPNVFTY+I++   CK ++V+ A+++ ++M  
Sbjct: 163 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 222

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEH-KIE 182
             C P+AV++ T+++  CK G +E+A +L          + +  YN LI+ LCK+   + 
Sbjct: 223 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 282

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A  L  ++   G+ P ++TY+++I    +  N    L +L  M   GC P++ ++  L+
Sbjct: 283 TAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCLI 340

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G     R  +A  L+N M      PNV  ++ LI GLC+   ++EA ++  +M      
Sbjct: 341 SGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----A 393

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           P++TT++ +I  F KAG +  A ++   M+ +G  PN 
Sbjct: 394 PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNT 431



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 43/277 (15%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           K+G+  E    Q L++++   G   +   +  +IN Y ++   E+A ++F ++ E    P
Sbjct: 171 KIGQTYE---AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVP 227

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---------- 113
               +N ++              +++ M++ G +  + TYN L+ +LCK           
Sbjct: 228 NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDL 287

Query: 114 -NRVDGA-----------------------YKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            N+++GA                        +LL  M  +GC PD ++Y  ++S +C   
Sbjct: 288 FNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN 347

Query: 150 QVEEAREL--AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           +VE+A+ L   M     V+ +N LI GLC + K+EEA  +L    DR   P++ T++TII
Sbjct: 348 RVEDAQRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNIL----DRMTAPDMTTFNTII 403

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
            + C  G +  +  ++  M   G  PN ++  +L  G
Sbjct: 404 LAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHG 440


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 254/527 (48%), Gaps = 10/527 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLK-PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPN- 99
           R G+ ++AL++F    + G+  P   +Y  +L++L+  +R  +I   +  + R G+EP+ 
Sbjct: 158 RYGMVDKALEIFVYSTQLGVVIPQDSVY-RMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216

Query: 100 VFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELA 158
           V  +  +L AL     V  A      +  +G     VS   ++  +  + Q+E A R L+
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLS 275

Query: 159 MRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
           +    G    V  +  LING CK  +++ AF L   M  RGI+P++I YST+I      G
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
            +     +  Q   +G   ++  F+S +  Y+  G    AS ++ RM+ +G  PNVV Y+
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI GLC +G + EA  +  Q+ +    P++ TYS+LIDGF K GNL     ++  MI  
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM 455

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
           G  P+VV Y  +V  L +  +   A     KM  ++   N V FN+ I G C   R D A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           +K+   M  Y   P++ T+  ++   +   R++EA  L   + K G++ + + Y T++  
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
            C+        QL   M       D    N++I+   K  ++ +A +  + +   G+  P
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEP 634

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           DI++Y +++ G C+   + EA    + +      PN  T  +L+  L
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 221/454 (48%), Gaps = 6/454 (1%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G   +AL     + E G +  +   N +L  L + ++  + + + S +   G  PNV T+
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTF 289

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL---AMR 160
             L+   CK   +D A+ L   M  +G  PD ++Y+T++    K G +    +L   A+ 
Sbjct: 290 CTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALH 349

Query: 161 FGS--GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            G    V V+++ I+   K   +  A  +   M+ +GI PNV+TY+ +I  LC  G +  
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           + G+ GQ+  RG  P+I +++SL+ G+   G       L+  MI+ G+ P+VV Y  L+ 
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           GL   G M  A+  S +M   S   NV  +++LIDG+ +      A +++  M   G  P
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V  +T +++V        +A  L  +M      P+ + + T I   C   +    ++L 
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D M++ +   +I   N ++  L + +R+++A +    + +  ++ +IVTYNT++ G C  
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             + EA ++   + +     + +T  I+I+  CK
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 247/509 (48%), Gaps = 31/509 (6%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGC-----------APDAVSYTTIV 142
           G +P+ +T   +   L +N   D A K+  EM  N+G            + DA     ++
Sbjct: 97  GKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLM 153

Query: 143 SSICKLGQVEEAREL---AMRFGSGV---SVYNALINGLCKEHKIE---EAFWLLCEMVD 193
              C+ G V++A E+   + + G  +   SVY  ++N L    +++   + F  LC    
Sbjct: 154 ECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCR--- 209

Query: 194 RGIDPN-VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
            GI+P+ V  +  ++ +L   G V  +L     +  RG    I S   +LKG L   +  
Sbjct: 210 GGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIE 268

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            AS L + ++  G  PNVV + TLI+G C  G MD A  +   ME+    P++  YS LI
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DG+ KAG L    +++++ +  G   +VV ++  + V  ++     A  + ++M  +   
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN VT+   IKGLC  GR+  A  +  Q+ +    P+I TY+ L+DG  +   ++  F L
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
             ++ K G   ++V Y  ++ G+ + G+++ A +   KML +  +L+ + FN +I  +C+
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
             + + A+++  R+ G     PD+ ++T+++      G ++EA     +M   G+ P+  
Sbjct: 509 LNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567

Query: 553 TWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            +  L+ +   ++     + + D +  NK
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 186/391 (47%), Gaps = 5/391 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    ++ E+D    L + M+  G+      + ++I+ Y + G+     K+F +    G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +K  V +++  +D  +     +  + +Y  M   G+ PNV TY IL+K LC++ R+  A+
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
            +  ++  +G  P  V+Y++++   CK G +     L      M +   V +Y  L++GL
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K+  +  A     +M+ + I  NV+ ++++I   C +   + +L +   M + G  P++
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +FT++++  ++ GR  EA  L+ RM + G  P+ +AY TLI   C +      + +   
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M+ N    ++   + +I    K   +  AS+ +N +I     P++V Y  M+   C    
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
             +A  + E +      PNTVT    I  LC
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLC 682



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 183/396 (46%), Gaps = 5/396 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F ++IN + + G  ++A  +F  + + G++P +  Y+ ++D         M + ++S   
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
             G++ +V  ++  +    K+  +  A  +   M  +G +P+ V+YT ++  +C+ G++ 
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408

Query: 153 EA-----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           EA     + L       +  Y++LI+G CK   +   F L  +M+  G  P+V+ Y  ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             L   G +  ++    +M  +    N+  F SL+ G+    R  EA  ++  M   G  
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+V  ++T++      G ++EA+ + ++M +    P+   Y  LID F K        Q+
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M  N  S ++     ++ +L + +    A      +      P+ VT+NT I G C 
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
             R+D A ++ + +K     PN  T   L+  L ++
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKI 684



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 35/174 (20%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
             D    + + M + G+      F +V+      G  E+AL +F+R+ + GL+P    Y 
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570

Query: 70  HILDA---------------LLAENRFSM--------------------INPIYSNMKRD 94
            ++DA               L+  N+ S                      +  ++N+   
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
            MEP++ TYN ++   C   R+D A ++   +      P+ V+ T ++  +CK+
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKI 684


>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 282/578 (48%), Gaps = 19/578 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L  + +++     L+  + + +  S   F S+++ Y ++G  + A   F  + + G
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P+V  +N +++ L      +    + S+M + G+EP+  TYNIL K       + GA+
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 354

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALI------NG 174
           +++ +M +KG +PD ++YT ++   C+LG ++    L     S     N++I      +G
Sbjct: 355 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 414

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LCK  +I+EA  L  +M   G+ P+++ YS +I  LC +G  + +L +  +M  +   PN
Sbjct: 415 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 474

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +  +LL G    G   EA  L + +I  G   ++V Y+ +I G   +G ++EA+ +  
Sbjct: 475 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 534

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
            + E    P+V T+++LI G+ K  N+  A +I + +   G +P+VV+YT ++       
Sbjct: 535 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 594

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC------GCGRV------DWAMKLLDQMK 402
                  L  +M  E  PP  VT++   KGLC       C  V      +   + L  M+
Sbjct: 595 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDME 654

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
                P+  TYN ++  L RV  +  AF  +  ++   +  +  TYN ++  +C  G + 
Sbjct: 655 SEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIR 714

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A   +  +  +   L    +  +I A+C +G    A++L  ++   G +N  I  Y+++
Sbjct: 715 KADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG-FNVSIRDYSAV 773

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           +  +C    + E+  +   ML++GI P+     V+++S
Sbjct: 774 INRLCRRHLVNESKFFFCLMLSQGISPDLDICEVMIKS 811



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/557 (27%), Positives = 262/557 (47%), Gaps = 37/557 (6%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D   Y+L++MK + ++ S   + SV+  +R         KM+   +E   K     Y+ 
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD------KMWDVYKEIKDKNE-HTYST 234

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++D L  + +           +   + P+V ++N ++   CK   VD A      +   G
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEAF 185
             P   S+  +++ +C +G + EA ELA      GV      YN L  G      I  A+
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 354

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN-IHSFTSLLKG 244
            ++ +M+D+G+ P+VITY+ ++   C +GN++  L +L  M  RG   N I   + +L G
Sbjct: 355 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSG 414

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
               GR  EA  L+N+M  +G  P++VAYS +IHGLC  G  D A+ +  +M +    PN
Sbjct: 415 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 474

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             T+ AL+ G  + G LL A  + + +IS+G + ++V Y  ++    ++    +A  L +
Sbjct: 475 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 534

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +      P+  TFN+ I G C    +  A K+LD +K Y   P++ +Y  L+D      
Sbjct: 535 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 594

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
             K   EL  E++  GI    VTY+ I  G+CR         +L + + E          
Sbjct: 595 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK--------- 645

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
                 CKQG       L D    G    PD I+Y +++  +C    +  AF++L+ M +
Sbjct: 646 ------CKQG-------LRDMESEGIP--PDQITYNTIIQYLCRVKHLSGAFVFLEIMKS 690

Query: 545 EGICPNFATWNVLVRSL 561
             +  + AT+N+L+ SL
Sbjct: 691 RNLDASSATYNILIDSL 707



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 242/499 (48%), Gaps = 9/499 (1%)

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           IL+ LL E     +  + SN  R   E     +++LL    +   VD +  +L +M ++ 
Sbjct: 140 ILEQLLQEE--GTLCELLSNSFRK-WESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQN 196

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLC 189
                 SY +++    +  ++ +  +E+  +       Y+ +++GLC++ K+E+A   L 
Sbjct: 197 LNVSTQSYNSVLYHFRETDKMWDVYKEIKDK---NEHTYSTVVDGLCRQQKLEDAVLFLR 253

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
               + I P+V+++++I+S  C +G V+ +      +   G  P+++S   L+ G  L G
Sbjct: 254 TSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVG 313

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              EA +L + M + G  P+ V Y+ L  G    G +  A  V   M +    P+V TY+
Sbjct: 314 SIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYT 373

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPN-VVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
            L+ G  + GN+     +   M+S G   N ++  + M+  LC+     +A SL  +M  
Sbjct: 374 ILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA 433

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +   P+ V ++  I GLC  G+ D A+ L D+M     LPN  T+  LL GL +   + E
Sbjct: 434 DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLE 493

Query: 429 AFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIY 488
           A  L+  +   G  L+IV YN ++ G  ++G + EA +L   ++  G      TFN +IY
Sbjct: 494 ARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 553

Query: 489 AYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGIC 548
            YCK   +  A ++LD I+  G   P ++SYT+L+    N G  +      ++M  EGI 
Sbjct: 554 GYCKTQNIAEARKILDVIKLYG-LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIP 612

Query: 549 PNFATWNVLVRSLFSNLGH 567
           P   T++V+ + L     H
Sbjct: 613 PTNVTYSVIFKGLCRGWKH 631



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 151/297 (50%), Gaps = 10/297 (3%)

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           +D+++ +  +M++ +   +  +Y++++  F +        ++W+ +       N   Y+ 
Sbjct: 182 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRET------DKMWD-VYKEIKDKNEHTYST 234

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V  LC+      A   +    +++  P+ V+FN+ + G C  G VD A      + +  
Sbjct: 235 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 294

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
            +P++ ++N L++GL  V  + EA EL +++ K G++ + VTYN +  G    GM+  A+
Sbjct: 295 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 354

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLW 524
           +++  ML +G   D IT+ I++   C+ G ++  + LL D +  G E N  II  + +L 
Sbjct: 355 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNS-IIPCSVMLS 413

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           G+C +G + EA     +M  +G+ P+   +++++  L   LG       L D M +K
Sbjct: 414 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGL-CKLGKFDMALWLYDEMCDK 469


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 228/458 (49%), Gaps = 7/458 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG-MEPNV 100
           +  +  +AL +FY+I+    KPT   YN ++  L+ E     ++ +Y+ M  +G   P+ 
Sbjct: 171 KAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDT 230

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
            TY+ L+ A  K  R D A  L  EM   G  P A  YTTI+    KLG+VE+A  L   
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 161 FGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                    V  Y  LI G+ K  K+EEA+ +   M+  G  P+V+  + +I+ L   G 
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           +  ++ +  +M    C PN+ ++ +++K  +    R  EA   + +M   G +P+   YS
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI G C    +++A+ +  +M+E    P    Y +LI+   KA     A++++  +  N
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
               +   Y  M+K L +     +A  L  +M    C P+   +N  + G+   G  D A
Sbjct: 471 CGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEA 530

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             LL  M++  C P++ ++N +L+G  R    K A E+ T ++   I+ ++V+YNT+L  
Sbjct: 531 HSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGC 590

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + RAGM  EA +L+ +M  +G + D IT++ I+ A  K
Sbjct: 591 LSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 236/477 (49%), Gaps = 33/477 (6%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSI 145
           I+  +K    +P   TYN ++  L +    +  ++L  EM N+G C PD V+Y+ ++++ 
Sbjct: 181 IFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240

Query: 146 CKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            KLG          R  S +S+++                    EM + G+ P    Y+T
Sbjct: 241 GKLG----------RDDSAISLFD--------------------EMKENGLHPTAKIYTT 270

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I+     +G VE +LG++ +M  +GC   ++++T L+KG    G+  EA  ++  M++EG
Sbjct: 271 ILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEG 330

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV  + LI+ L   G + +A+ +  +ME   C PNV TY+ +I    ++      +
Sbjct: 331 CKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEA 390

Query: 326 QIW-NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +W  +M  NG  P+   Y+ ++   C+ N   +A  L+E+M  +   P    + + I  
Sbjct: 391 FLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINA 450

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L    R + A +L  ++++     +   Y  ++  L +  R+ EA +L  E++K G   +
Sbjct: 451 LGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPD 510

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +  YN ++ G+ R GM  EA  LL  M   G   D  + NII+  + + G    AI++  
Sbjct: 511 VYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFT 570

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           R++   +  PD++SY ++L  +  +G  +EA   +++M ++G   +  T++ ++ ++
Sbjct: 571 RMK-NSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 207/431 (48%), Gaps = 7/431 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L ++   + V  L  +M  EG    + V + ++I ++ ++G  + A+ +F  ++E 
Sbjct: 200 MILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN 259

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           GL PT KIY  IL       R      +   MK  G    V+TY  L+K + K  +V+ A
Sbjct: 260 GLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEA 319

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
           Y + + M  +GC PD V    +++ + K G++ +A +L     +++    V  YN +I  
Sbjct: 320 YSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA 379

Query: 175 LCK-EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           L + + +  EAF    +M + G+ P+  TYS +I   C    VE +L +L +M  +G  P
Sbjct: 380 LFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP 439

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL+       R   A++L+  +       +   Y+ +I  L   G + EAV + 
Sbjct: 440 CPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLF 499

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M++  C P+V  Y+AL+ G  + G    A  +   M  NGC+P++ ++  ++    + 
Sbjct: 500 NEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFART 559

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  +  +M      P+ V++NT +  L   G  + A KL+ +M       ++ TY
Sbjct: 560 GGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITY 619

Query: 414 NELLDGLLRVN 424
           + +L+ + +++
Sbjct: 620 SSILEAVGKID 630



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 200/458 (43%), Gaps = 38/458 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F    + Y ALI+ L +   + E +  + EMV           S I+  L     V  +L
Sbjct: 120 FEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKAL 179

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHG 279
            I  Q+  R C P  +++ S++   +  G   +  +L+N M  EG  LP+ V YS LI  
Sbjct: 180 SIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAA 239

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G  D A+S+  +M+EN   P    Y+ ++  + K G +  A  +   M   GC+  
Sbjct: 240 FGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALT 299

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++K + +     +A+S+   M  E C P+ V  N  I  L   GR+  A+KL +
Sbjct: 300 VYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFE 359

Query: 400 QMKQYECLPNITTYNELLDGLLRVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           +M+  +C PN+ TYN ++  L     R  EAF    ++++ G+  +  TY+ ++ G C+ 
Sbjct: 360 EMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKT 419

Query: 459 GMVVEAFQLLGKMLIEGTKL-----------------------------------DAITF 483
             V +A  LL +M  +G                                       A  +
Sbjct: 420 NRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVY 479

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            ++I    K G+++ A+ L + ++  G  NPD+ +Y +L+ G+   G   EA   L+ M 
Sbjct: 480 AVMIKHLGKCGRLSEAVDLFNEMKKLG-CNPDVYAYNALMSGMVRVGMTDEAHSLLRTME 538

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             G  P+  + N+++       G  G + +   +  +K
Sbjct: 539 ENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R  F  +   Y  LIH L   G + E      +M  ++C       S ++    KA  + 
Sbjct: 117 RRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVN 176

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTF 381
            A  I+ ++    C P    Y  M+ +L Q     + H L  +M  E +C P+TVT++  
Sbjct: 177 KALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSAL 236

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I      GR D A+ L D+MK+    P    Y  +L    ++ RV++A  LV E+++ G 
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            L + TY  ++ GV +AG V EA+ +   ML EG K D +  N +I    K G++ +AI+
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK 356

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
           L + +    +  P++++Y +++  +  S     EAF++ +KM   G+ P+  T+++L+
Sbjct: 357 LFEEME-SLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILI 413



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 5/211 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M  +G +     + S+IN+  +    E A ++F  +RE     + ++Y  ++  L 
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R S    +++ MK+ G  P+V+ YN L+  + +    D A+ LL  M   GC PD  
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           S+  I++   + G  + A E+  R  +      V  YN ++  L +    EEA  L+ EM
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGI 222
             +G + ++ITYS+I+ ++  +    T  G+
Sbjct: 608 NSKGFEYDLITYSSILEAVGKIDEDHTPAGL 638



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 76/150 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ LG+   +     L  +MK  G +     + ++++   RVG+ ++A  +   + E G
Sbjct: 482 MIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENG 541

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +N IL+             +++ MK   ++P+V +YN +L  L +    + A 
Sbjct: 542 CTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAA 601

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           KL+ EM +KG   D ++Y++I+ ++ K+ +
Sbjct: 602 KLMKEMNSKGFEYDLITYSSILEAVGKIDE 631


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 255/559 (45%), Gaps = 30/559 (5%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           VF  +I  Y + G+ + A++ F  +   G KP+V   N IL +++ + R  ++  ++  M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
              G+ PNV T+NIL+  LC    +  A  LL +M   G  P  V+Y T+++  CK G+ 
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           + A EL          + V  YN  I+ LC  H+  +A+ LL +M    I PN +TY+T+
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I+     G +  +  +  +M     +PN  ++ +L+ G+   G   EA  L + M   G 
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 267 LPNVVAYST-----------------------LIHGLCSNGSMDEAVSVSYQMEENSCPP 303
             N     T                       L+  LC +G + EA      M      P
Sbjct: 405 RLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 464

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           N  TY  +I+G+   G+ L A   ++ MI  G  P+   Y  ++K LC+     +A   +
Sbjct: 465 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 524

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            ++ +     ++V +NT +   C  G +  A+ L D+M Q   LP+  TY+ LL GL R 
Sbjct: 525 NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRK 584

Query: 424 NRVKEAFELV-TEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
            +   A  L  T + +  +  N V Y  ++ G+ +AG    AF    +M+ +GT  D + 
Sbjct: 585 GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA 644

Query: 483 FNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           FN II +  ++G++  A      +R  G   P++ +Y  LL G      +         M
Sbjct: 645 FNAIIDSCSRRGQMMKANDFFSTMRWWGVC-PNLATYNILLHGFSKKQALLRYLSLYSTM 703

Query: 543 LNEGICPNFATWNVLVRSL 561
           + EGI P+  T++ L+  L
Sbjct: 704 MREGIFPDKLTFHSLILGL 722



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 163/656 (24%), Positives = 281/656 (42%), Gaps = 112/656 (17%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL+QM+  G   +   + +++N Y + G  + A+++   +   G++  V  YN  +D L 
Sbjct: 255 LLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLC 314

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             +R +    +   M+++ + PN  TYN L+    K  ++  A ++  EM     +P+ V
Sbjct: 315 TNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCV 374

Query: 137 SYTTIVSSICKLGQVEEAREL-------------------AMRF-------GSGVSVY-- 168
           +Y  ++   C +G  EEA  L                   AM+        G G   +  
Sbjct: 375 TYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTC 434

Query: 169 NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV 228
           N L++ LC++ K+ EA   LC M   G+ PN ITY  II+    +G+   +      M  
Sbjct: 435 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIK 494

Query: 229 RGCNPNIHSFTSLLKG------------------YLLG-----------------GRTHE 253
            G +P+  ++ SLLKG                  Y+ G                 G  HE
Sbjct: 495 CGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHE 554

Query: 254 ASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV-SYQMEENSCPPNVTTYSALI 312
           A  L+++M++   LP+   YS+L+ GLC  G    AV +    M   +  PN   Y+ L+
Sbjct: 555 AVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLV 614

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV-------KVLCQNNMFHQAH----- 360
           DG +KAG+   A   +  M+  G  P+ VA+  ++       +++  N+ F         
Sbjct: 615 DGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVC 674

Query: 361 -----------------------SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
                                  SL   M  E   P+ +TF++ I GL   G  D  +KL
Sbjct: 675 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 734

Query: 398 LDQMKQYEC------------LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           L +M   E             +P    Y  L++G+ RV  ++ AF+L  E+E  G   + 
Sbjct: 735 LGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHE 794

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V  + ++ G+   G   +A  +L  ML         TF  +++ +C+  K+  A++L   
Sbjct: 795 VAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGV 854

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           +   G    D+++Y  L+ G+C +G    AF   ++M +  +CPN  T+ VLV ++
Sbjct: 855 MELCG-LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 909



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 160/601 (26%), Positives = 264/601 (43%), Gaps = 68/601 (11%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
           V  L ++M  +G+  + G F  +IN     G  ++A  +  ++ E G  PT+  YN +L+
Sbjct: 217 VWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLN 276

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
               + R+     +   M   G+E +V TYN+ +  LC N+R   AY LL +M  +  +P
Sbjct: 277 WYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISP 336

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           + V+Y                              N LING  KE KI  A  +  EM  
Sbjct: 337 NEVTY------------------------------NTLINGFVKEGKIGVAAQVFNEMSK 366

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH-SFTSLLKGYLL----- 247
             + PN +TY+ +I   C VG+ E +L +L  M   G   N H + T  +K Y +     
Sbjct: 367 FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNG 426

Query: 248 -----------------GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
                             G+  EA      M R G +PN + Y  +I+G  S G    A 
Sbjct: 427 HGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAF 486

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S    M +    P+  TY +L+ G  K GNL+ A +  NR+     + + V Y  ++   
Sbjct: 487 SFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAET 546

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL-DQMKQYECLPN 409
           C++   H+A +L +KM   N  P++ T+++ + GLC  G+   A+ L    M +    PN
Sbjct: 547 CKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPN 606

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              Y  L+DGL +    K AF    E+ K G   + V +N I+    R G +++A     
Sbjct: 607 HVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFS 666

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M   G   +  T+NI+++ + K+  +   + L   +   G + PD +++ SL+ G+  S
Sbjct: 667 TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIF-PDKLTFHSLILGLSKS 725

Query: 530 G------------GMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           G             M+E+ + L +ML  G+ P  A +  L+  +   +G +   + L D 
Sbjct: 726 GIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGM-CRVGDIQGAFKLKDE 784

Query: 578 M 578
           M
Sbjct: 785 M 785



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 215/453 (47%), Gaps = 29/453 (6%)

Query: 153 EARELAMRFGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           E  EL    G   SVY  N ++  + K+ + E  + L  EM D+GI PNV T++ +I+ L
Sbjct: 184 ETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGL 243

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  GN++ +  +L QM   G  P I ++ +LL  Y   GR   A +L + MI +G   +V
Sbjct: 244 CVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADV 303

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
             Y+  I  LC+N    +A  +  +M +    PN  TY+ LI+GF K G +  A+Q++N 
Sbjct: 304 CTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNE 363

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM--------------------AFEN 370
           M     SPN V Y  ++   C    F +A  L++ M                    A  N
Sbjct: 364 MSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMN 423

Query: 371 C---PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
           C     +  T N  +  LC  G++  A K L  M +   +PN  TY+ +++G   +    
Sbjct: 424 CNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPL 483

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
            AF    ++ KCG   +  TY ++L G+C+ G +VEA + L ++      +D++ +N ++
Sbjct: 484 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLL 543

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG- 546
              CK G ++ A+ L D++       PD  +Y+SLL G+C  G    A       +  G 
Sbjct: 544 AETCKSGNLHEAVALFDKMVQNNVL-PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGT 602

Query: 547 ICPNFATWNVLVRSLFSNLGH-LGPVYILDDIM 578
           + PN   +  LV  L S  GH     Y  +++M
Sbjct: 603 LFPNHVMYTCLVDGL-SKAGHPKAAFYFFEEMM 634



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 228/491 (46%), Gaps = 35/491 (7%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA----ENRFSMINPIYSNM 91
           +++S  R G   +A K    +   GL P    Y+ I++   +     N FS     + +M
Sbjct: 437 LVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFS----FFDDM 492

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            + G  P+ FTY  LLK LCK   +  A K L  +     A D+V Y T+++  CK G +
Sbjct: 493 IKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNL 552

Query: 152 EEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVIT 202
            EA  L   F   V          Y++L+ GLC++ K   A  L    + RG + PN + 
Sbjct: 553 HEAVAL---FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVM 609

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+ ++  L   G+ + +     +M  +G  P+  +F +++      G+  +A+D ++ M 
Sbjct: 610 YTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 669

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG--- 319
             G  PN+  Y+ L+HG     ++   +S+   M      P+  T+ +LI G +K+G   
Sbjct: 670 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 729

Query: 320 ---NLLG------ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
               LLG      ++ + + M+ NG  P    Y  ++  +C+      A  L ++M    
Sbjct: 730 LGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 789

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
              + V  +  ++GL  CG+ + AM +LD M +   LP I T+  L+    R  ++ EA 
Sbjct: 790 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 849

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           +L   +E CG++L++V YN ++ G+C  G    AF+L  +M       +  T+ +++ A 
Sbjct: 850 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 909

Query: 491 CKQGKVNNAIQ 501
                 NN IQ
Sbjct: 910 ---SAANNLIQ 917



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/494 (22%), Positives = 203/494 (41%), Gaps = 65/494 (13%)

Query: 4   KLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKP 63
           KLGE       +  L  M   G+  +   +  +IN Y  +G    A   F  + + G  P
Sbjct: 446 KLGE------AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHP 499

Query: 64  TVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL 123
           +   Y  +L  L             + +       +   YN LL   CK+  +  A  L 
Sbjct: 500 SFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALF 559

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVS---------VYNALING 174
            +M      PD+ +Y+++++ +C+ G+   A  L   FG+ +          +Y  L++G
Sbjct: 560 DKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCL---FGTAMGRGTLFPNHVMYTCLVDG 616

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L K    + AF+   EM+ +G  P+ + ++ II S    G +  +      M   G  PN
Sbjct: 617 LSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPN 676

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS--------- 285
           + ++  LL G+           L++ M+REG  P+ + + +LI GL  +G          
Sbjct: 677 LATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLG 736

Query: 286 ---MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS----- 337
              M+E+  V ++M EN   P    Y  LI+G  + G++ GA ++ + M + G       
Sbjct: 737 KMIMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 796

Query: 338 ------------------------------PNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
                                         P +  +T ++   C++    +A  L   M 
Sbjct: 797 ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 856

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
                 + V +N  I G+C  G    A +L ++M+  +  PNITTY  L+D +   N + 
Sbjct: 857 LCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLI 916

Query: 428 EAFELVTEIEKCGI 441
           +  +L+T++++ G+
Sbjct: 917 QGEKLLTDLQERGL 930


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 228/458 (49%), Gaps = 7/458 (1%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG-MEPNV 100
           +  +  +AL +FY+I+    KPT   YN ++  L+ E     ++ +Y+ M  +G   P+ 
Sbjct: 171 KAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDT 230

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
            TY+ L+ A  K  R D A  L  EM   G  P A  YTTI+    KLG+VE+A  L   
Sbjct: 231 VTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQE 290

Query: 161 FGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
                    V  Y  LI G+ K  K+EEA+ +   M+  G  P+V+  + +I+ L   G 
Sbjct: 291 MKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR 350

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYS 274
           +  ++ +  +M    C PN+ ++ +++K  +    R  EA   + +M   G +P+   YS
Sbjct: 351 LADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYS 410

Query: 275 TLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISN 334
            LI G C    +++A+ +  +M+E    P    Y +LI+   KA     A++++  +  N
Sbjct: 411 ILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELREN 470

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA 394
               +   Y  M+K L +     +A  L  +M    C P+   +N  + G+   G  D A
Sbjct: 471 CGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEA 530

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
             LL  M++  C P++ ++N +L+G  R    K A E+ T ++   I+ ++V+YNT+L  
Sbjct: 531 HSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGC 590

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           + RAGM  EA +L+ +M  +G + D IT++ I+ A  K
Sbjct: 591 LSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 236/477 (49%), Gaps = 33/477 (6%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSI 145
           I+  +K    +P   TYN ++  L +    +  ++L  EM N+G C PD V+Y+ ++++ 
Sbjct: 181 IFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAF 240

Query: 146 CKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
            KLG          R  S +S+++                    EM + G+ P    Y+T
Sbjct: 241 GKLG----------RDDSAISLFD--------------------EMKENGLHPTAKIYTT 270

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           I+     +G VE +LG++ +M  +GC   ++++T L+KG    G+  EA  ++  M++EG
Sbjct: 271 ILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEG 330

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
             P+VV  + LI+ L   G + +A+ +  +ME   C PNV TY+ +I    ++      +
Sbjct: 331 CKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEA 390

Query: 326 QIW-NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +W  +M  NG  P+   Y+ ++   C+ N   +A  L+E+M  +   P    + + I  
Sbjct: 391 FLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINA 450

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
           L    R + A +L  ++++     +   Y  ++  L +  R+ EA +L  E++K G   +
Sbjct: 451 LGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPD 510

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
           +  YN ++ G+ R GM  EA  LL  M   G   D  + NII+  + + G    AI++  
Sbjct: 511 VYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFT 570

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           R++   +  PD++SY ++L  +  +G  +EA   +++M ++G   +  T++ ++ ++
Sbjct: 571 RMK-NSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 207/431 (48%), Gaps = 7/431 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L ++   + V  L  +M  EG    + V + ++I ++ ++G  + A+ +F  ++E 
Sbjct: 200 MILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKEN 259

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           GL PT KIY  IL       R      +   MK  G    V+TY  L+K + K  +V+ A
Sbjct: 260 GLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEA 319

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
           Y + + M  +GC PD V    +++ + K G++ +A +L     +++    V  YN +I  
Sbjct: 320 YSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKA 379

Query: 175 LCK-EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           L + + +  EAF    +M + G+ P+  TYS +I   C    VE +L +L +M  +G  P
Sbjct: 380 LFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP 439

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL+       R   A++L+  +       +   Y+ +I  L   G + EAV + 
Sbjct: 440 CPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLF 499

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M++  C P+V  Y+AL+ G  + G    A  +   M  NGC+P++ ++  ++    + 
Sbjct: 500 NEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFART 559

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
                A  +  +M      P+ V++NT +  L   G  + A KL+ +M       ++ TY
Sbjct: 560 GGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITY 619

Query: 414 NELLDGLLRVN 424
           + +L+ + +++
Sbjct: 620 SSILEAVGKID 630



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/458 (25%), Positives = 200/458 (43%), Gaps = 38/458 (8%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F    + Y ALI+ L +   + E +  + EMV           S I+  L     V  +L
Sbjct: 120 FEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKAL 179

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF-LPNVVAYSTLIHG 279
            I  Q+  R C P  +++ S++   +  G   +  +L+N M  EG  LP+ V YS LI  
Sbjct: 180 SIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAA 239

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
               G  D A+S+  +M+EN   P    Y+ ++  + K G +  A  +   M   GC+  
Sbjct: 240 FGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALT 299

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           V  YT ++K + +     +A+S+   M  E C P+ V  N  I  L   GR+  A+KL +
Sbjct: 300 VYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFE 359

Query: 400 QMKQYECLPNITTYNELLDGLLRVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           +M+  +C PN+ TYN ++  L     R  EAF    ++++ G+  +  TY+ ++ G C+ 
Sbjct: 360 EMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKT 419

Query: 459 GMVVEAFQLLGKMLIEGTKL-----------------------------------DAITF 483
             V +A  LL +M  +G                                       A  +
Sbjct: 420 NRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVY 479

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
            ++I    K G+++ A+ L + ++  G  NPD+ +Y +L+ G+   G   EA   L+ M 
Sbjct: 480 AVMIKHLGKCGRLSEAVDLFNEMKKLG-CNPDVYAYNALMSGMVRVGMTDEAHSLLRTME 538

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
             G  P+  + N+++       G  G + +   +  +K
Sbjct: 539 ENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSK 576



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 147/298 (49%), Gaps = 3/298 (1%)

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           R  F  +   Y  LIH L   G + E      +M  ++C       S ++    KA  + 
Sbjct: 117 RRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVN 176

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE-NCPPNTVTFNTF 381
            A  I+ ++    C P    Y  M+ +L Q     + H L  +M  E +C P+TVT++  
Sbjct: 177 KALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSAL 236

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I      GR D A+ L D+MK+    P    Y  +L    ++ RV++A  LV E+++ G 
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            L + TY  ++ GV +AG V EA+ +   ML EG K D +  N +I    K G++ +AI+
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK 356

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQEAFIYLQKMLNEGICPNFATWNVLV 558
           L + +    +  P++++Y +++  +  S     EAF++ +KM   G+ P+  T+++L+
Sbjct: 357 LFEEME-SLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILI 413



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 5/210 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           LL++M  +G +     + S+IN+  +    E A ++F  +RE     + ++Y  ++  L 
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLG 487

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R S    +++ MK+ G  P+V+ YN L+  + +    D A+ LL  M   GC PD  
Sbjct: 488 KCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLN 547

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEM 191
           S+  I++   + G  + A E+  R  +      V  YN ++  L +    EEA  L+ EM
Sbjct: 548 SHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEM 607

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLG 221
             +G + ++ITYS+I+ ++  +    T  G
Sbjct: 608 NSKGFEYDLITYSSILEAVGKIDEDHTPAG 637



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 76/150 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+ LG+   +     L  +MK  G +     + ++++   RVG+ ++A  +   + E G
Sbjct: 482 MIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENG 541

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  +N IL+             +++ MK   ++P+V +YN +L  L +    + A 
Sbjct: 542 CTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAA 601

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           KL+ EM +KG   D ++Y++I+ ++ K+ +
Sbjct: 602 KLMKEMNSKGFEYDLITYSSILEAVGKIDE 631


>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 257/524 (49%), Gaps = 7/524 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L  MK  G+  +   +  +I    + G   +A+ ++  +   G+ PTV+ Y+ ++ A   
Sbjct: 159 LPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGK 218

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                 +  +   M+  G+ PNV++Y I ++ L +  R++ AY++L +M  +GC PD V+
Sbjct: 219 RRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVT 278

Query: 138 YTTIVSSICKLGQVEEARELAMRFGSGVS-----VYNALINGLCKEHKIEEAFWLLCEMV 192
            T ++  +C  G++ +A+++  +  +         Y  L++             +   + 
Sbjct: 279 NTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALK 338

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
             G + NV++Y+  + +LC VG V+ +L +  +M  +G  P  +S+ SL+ G+L   R +
Sbjct: 339 ADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFN 398

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
            A +L+N M   G  PN   +   I+    +G   +A+     M+     P+V   +A++
Sbjct: 399 RALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVL 458

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
            G AK G L  A ++++ + + G SP+ + YT M+K   + +   +A  +  +M    C 
Sbjct: 459 YGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCA 518

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+ +  N+ I  L   GR + A K+  ++K+    P   TYN LL GL R  +VKE  +L
Sbjct: 519 PDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQL 578

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
           +  +       NI+TYNT+L  +C+ G V  A  +L  M + G   D  ++N ++Y   K
Sbjct: 579 LEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVK 638

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + +++ A  +  +++      PD  +  ++L     SG M+EA 
Sbjct: 639 EDRLDEAFWMFCQMK--KVLAPDYATVCTILPSFVRSGLMKEAL 680



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 275/586 (46%), Gaps = 43/586 (7%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L   M + G + +    +  IN + + G + +ALK +  ++  G+ P V   N +L  L 
Sbjct: 403 LFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLA 462

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R  M   ++  +K  G+ P+  TY +++K   K +  D A K+  EM    CAPD +
Sbjct: 463 KTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVL 522

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +  +++  + K G+  EA ++      M        YN L+ GL +E K++E   LL  M
Sbjct: 523 AMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGM 582

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
                 PN+ITY+T++  LC  G V  +L +L  M + GC P++ S+ +++ G +   R 
Sbjct: 583 NSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRL 642

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV--SYQMEENSCPPNVTTYS 309
            EA  ++ +M ++   P+     T++     +G M EA+     Y ++ +S     + +S
Sbjct: 643 DEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHS 701

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L++G  K      + +    + S+G   + +  + +++ LC++     AH L++K    
Sbjct: 702 -LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENL 760

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
                T ++N  I GL     +D A +L  +MK+  C P+  TY+ +LD + +  R+++ 
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
            ++  E+   G +   VTYNTI+ G+ ++ M+ EA  L  +++ EG      T+  ++  
Sbjct: 821 LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880

Query: 490 YCKQGKVNNAIQLLD---------------------RIRGGGE-------------WNPD 515
             K G + +A  L D                     RI G  E              NPD
Sbjct: 881 LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           I SYT ++  +C  G + +   Y +++ + G+ P+  T+N+L+  L
Sbjct: 941 IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGL 986



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 242/525 (46%), Gaps = 33/525 (6%)

Query: 35   SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
            S+I+   + G   +A K+FY ++E  L+PT   YN +L  L  E +   +  +   M  +
Sbjct: 526  SLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN 585

Query: 95   GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
               PN+ TYN +L  LCKN  V+ A  +L  M   GC PD                    
Sbjct: 586  SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPD-------------------- 625

Query: 155  RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
                      +S YN ++ GL KE +++EAFW+ C+M  + + P+  T  TI+ S    G
Sbjct: 626  ----------LSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSG 674

Query: 215  NVETSLGILGQMFVR-GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             ++ +L  + +  ++     +  S  SL++G L    T ++ +    +   G L + +  
Sbjct: 675  LMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFL 734

Query: 274  STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
            S +I  LC +     A  +  + E         +Y+ALI G      +  A ++++ M  
Sbjct: 735  SPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKR 794

Query: 334  NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
             GC P+   Y  ++  + ++        + E+M  +      VT+NT I GL     +D 
Sbjct: 795  LGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDE 854

Query: 394  AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
            A+ L  Q+      P   TY  LLDGLL+   +++A  L  E+ +CG + N   YN +L+
Sbjct: 855  AINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLN 914

Query: 454  GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            G   AG   +  +L   M+ +G   D  ++ ++I   C  G++N+ +    ++   G   
Sbjct: 915  GYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMG-LE 973

Query: 514  PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            PD+I+Y  L+ G+  SG ++EA      M  +GI PN  T+N L+
Sbjct: 974  PDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 144/558 (25%), Positives = 256/558 (45%), Gaps = 7/558 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+E +     +  V  +   M+ + +  + G F +V  +    G    A      ++E G
Sbjct: 107 MLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           +      YN ++  L+          +Y  M  DG+ P V TY++L+ A  K    +   
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGL 175
            LL EM  +G  P+  SYT  +  + + G++EEA  +  +         V     LI  L
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C   ++ +A  +  +M      P+ +TY T++    D G+  +   I   +   G N N+
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNV 346

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            S+T+ +      GR  EA D+++ M ++G +P   +Y++LI G       + A+ +   
Sbjct: 347 VSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNH 406

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  +   PN  T+   I+   K+G  L A + +  M S G  P+VVA   ++  L +   
Sbjct: 407 MNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGR 466

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  +  ++      P+ +T+   IK        D AMK+  +M +  C P++   N 
Sbjct: 467 LGMAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNS 526

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           L+D L +  R  EA+++  E+++  ++    TYNT+L G+ R G V E  QLL  M    
Sbjct: 527 LIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNS 586

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEA 535
              + IT+N ++   CK G+VN A+ +L  +   G   PD+ SY ++++G+     + EA
Sbjct: 587 FPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG-CMPDLSSYNTVMYGLVKEDRLDEA 645

Query: 536 FIYLQKMLNEGICPNFAT 553
           F    +M  + + P++AT
Sbjct: 646 FWMFCQM-KKVLAPDYAT 662



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 236/479 (49%), Gaps = 42/479 (8%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            +D   ++  QMK + ++       +++ S+ R GL ++AL   + +RE+ L+P  K+   
Sbjct: 642  LDEAFWMFCQMK-KVLAPDYATVCTILPSFVRSGLMKEAL---HTVREYILQPDSKV--- 694

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNV-FTYNILLKALCKNNRVDGAYKLLVEMGNK 129
                    +R S+ + +   +KRDG E ++ F  NI                      + 
Sbjct: 695  --------DRSSVHSLMEGILKRDGTEKSIEFAENI---------------------ASS 725

Query: 130  GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVSV----YNALINGLCKEHKIEEA 184
            G   D +  + I+  +CK  +   A EL  +F + GVS+    YNALI GL  E  I+ A
Sbjct: 726  GLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIA 785

Query: 185  FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
              L  EM   G DP+  TY  I+ ++     +E  L I  +M  +G      ++ +++ G
Sbjct: 786  EELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISG 845

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
             +      EA +L+ +++ EGF P    Y  L+ GL  +G++++A ++  +M E  C PN
Sbjct: 846  LVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPN 905

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
               Y+ L++G+  AG+     +++  M+  G +P++ +YT ++  LC +   +   S  +
Sbjct: 906  CAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFK 965

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            ++      P+ +T+N  I GL   GR++ A+ L + M++    PN+ TYN L+  L +  
Sbjct: 966  QLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 1025

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +  EA ++  E+   G + N+ TYN ++ G   +G    AF   G+M++ G + ++ T+
Sbjct: 1026 KAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTY 1084



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 191/395 (48%), Gaps = 35/395 (8%)

Query: 30   EGVFISVINSYRRVGLAEQALKMFYRIREF---GLKPTVKIYNHILDALLAENRFSMINP 86
            + +F+S I   R +   ++AL     +++F   G+      YN ++  L+ E+   +   
Sbjct: 730  DDLFLSPI--IRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEE 787

Query: 87   IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
            ++S MKR G +P+ FTY+++L A+ K+ R++   K+  EM NKG     V+Y TI+S   
Sbjct: 788  LFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS--- 844

Query: 147  KLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
                                       GL K   ++EA  L  +++  G  P   TY  +
Sbjct: 845  ---------------------------GLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPL 877

Query: 207  ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
            +  L   GN+E +  +  +M   GC PN   +  LL GY + G T +  +L+  M+ +G 
Sbjct: 878  LDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGM 937

Query: 267  LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             P++ +Y+ +I  LC++G +++ +S   Q+ +    P++ TY+ LI G  K+G L  A  
Sbjct: 938  NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALS 997

Query: 327  IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
            ++N M   G +PN+  Y  ++  L +     +A  + E++  +   PN  T+N  I+G  
Sbjct: 998  LYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYS 1057

Query: 387  GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
              G  + A     +M    C PN +TY +L + +L
Sbjct: 1058 VSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQML 1092



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/599 (21%), Positives = 268/599 (44%), Gaps = 43/599 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++K G+  +   V  +   +K +G + +   + + +++  +VG  ++AL +F  +++ G
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN ++   L  +RF+    ++++M   G  PN +T+ + +    K+     A 
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           K    M +KG  PD V+   ++  + K G++  A+ +     AM        Y  +I   
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCC 496

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K    +EA  +  EM++    P+V+  +++I  L   G    +  I  ++      P  
Sbjct: 497 SKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTD 556

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +LL G    G+  E   L   M    F PN++ Y+T++  LC NG ++ A+ + Y 
Sbjct: 557 CTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYS 616

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M  N C P++++Y+ ++ G  K   L  A  ++ +M     +P+      ++    ++ +
Sbjct: 617 MTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGL 675

Query: 356 FHQA--------------------HSLIEKMAFENCPPNTVTF----------------N 379
             +A                    HSL+E +   +    ++ F                +
Sbjct: 676 MKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLS 735

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             I+ LC       A +L+ + +         +YN L+ GL+  + +  A EL +E+++ 
Sbjct: 736 PIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL 795

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   +  TY+ IL  + ++  + +  ++  +M  +G K   +T+N II    K   ++ A
Sbjct: 796 GCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEA 855

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           I L  ++   G ++P   +Y  LL G+   G +++A     +ML  G  PN A +N+L+
Sbjct: 856 INLYYQLMSEG-FSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILL 913



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 170/402 (42%), Gaps = 36/402 (8%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I  NV T+ T+  ++   G + ++   L  M   G   N +++  L+   +  G   EA 
Sbjct: 132 IKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAM 191

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           D++  M  +G +P V  YS L+         +  V +  +ME     PNV +Y+  I   
Sbjct: 192 DVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVL 251

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            +AG L  A +I  +M   GC P+VV  T ++++LC       A  +  KM   +  P+ 
Sbjct: 252 GQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDR 311

Query: 376 VTFNTF-----------------------------------IKGLCGCGRVDWAMKLLDQ 400
           VT+ T                                    +  LC  GRVD A+ + D+
Sbjct: 312 VTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDE 371

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           MKQ   +P   +YN L+ G L+ +R   A EL   +   G   N  T+   ++   ++G 
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
            ++A +    M  +G   D +  N ++Y   K G++  A ++   ++  G  +PD I+YT
Sbjct: 432 SLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG-ISPDNITYT 490

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
            ++     +    EA     +M+     P+    N L+  L+
Sbjct: 491 MMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLY 532



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 39/382 (10%)

Query: 213 VGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVA 272
           VG+V     ++ +  ++    N+ +F ++     + G    A      M   G + N   
Sbjct: 117 VGDVAQVFDLMQRQIIKA---NVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYT 173

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMI 332
           Y+ LI+ L  +G   EA+ V   M  +   P V TYS L+  F K  +      +   M 
Sbjct: 174 YNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEME 233

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR-- 390
           + G  PNV +YT  ++VL Q     +A+ ++ KM  E C P+ VT    I+ LC  GR  
Sbjct: 234 ARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLA 293

Query: 391 ----VDWAMKLLDQ-----------------------------MKQYECLPNITTYNELL 417
               V W MK  DQ                             +K      N+ +Y   +
Sbjct: 294 DAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAV 353

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           D L +V RV EA ++  E+++ GI     +YN+++ G  +A     A +L   M I G  
Sbjct: 354 DALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPT 413

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            +  T  + I  + K G+   A++  + ++  G   PD+++  ++L+G+  +G +  A  
Sbjct: 414 PNGYTHVLFINYHGKSGESLKALKRYELMKSKG-IVPDVVAGNAVLYGLAKTGRLGMAKR 472

Query: 538 YLQKMLNEGICPNFATWNVLVR 559
              ++   GI P+  T+ ++++
Sbjct: 473 VFHELKAMGISPDNITYTMMIK 494



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/311 (20%), Positives = 139/311 (44%), Gaps = 8/311 (2%)

Query: 252 HEASDLWNRMIREGFLPNVVAYST----LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
            EA +L+  + R+   P VV  +     ++  + ++G + +   V   M+      NV T
Sbjct: 82  EEALELFLSVARQ---PRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGT 138

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           +  +       G L  A      M   G   N   Y  ++  L ++    +A  + + MA
Sbjct: 139 FCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMA 198

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +   P   T++  +         +  + LL +M+     PN+ +Y   +  L +  R++
Sbjct: 199 ADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLE 258

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           EA+ ++ ++E+ G + ++VT   ++  +C AG + +A  +  KM     K D +T+  ++
Sbjct: 259 EAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLL 318

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
                 G   +  ++ + ++  G +N +++SYT+ +  +C  G + EA     +M  +GI
Sbjct: 319 DKCGDSGDSRSVSEIWNALKADG-YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGI 377

Query: 548 CPNFATWNVLV 558
            P   ++N L+
Sbjct: 378 IPQQYSYNSLI 388



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 39/182 (21%)

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           EL+    RV  V + F+L   +++  I+ N+ T+ T+   V   G +  A   L  M   
Sbjct: 109 ELMRAHGRVGDVAQVFDL---MQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEA 165

Query: 475 GTKLDAITFNIIIY-----------------------------------AYCKQGKVNNA 499
           G  L+A T+N +IY                                   A+ K+      
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225

Query: 500 IQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           + LL  +   G   P++ SYT  +  +  +G ++EA+  L+KM  EG  P+  T  VL++
Sbjct: 226 VGLLGEMEARG-VRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQ 284

Query: 560 SL 561
            L
Sbjct: 285 IL 286


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 261/529 (49%), Gaps = 46/529 (8%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I  Y   G A  A ++   +RE G +PTV  YN +++ L  +        ++  M + G
Sbjct: 251 LIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVG 310

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE-- 153
           +E N  T+N+L+    K  R+D AY    EM  +G  PD  ++  + +   K G+  +  
Sbjct: 311 IEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLA 370

Query: 154 --ARELAMRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
              +EL   FGS +S    + ++  LC + ++++A+ L+C  +++G+  +V         
Sbjct: 371 HGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVA-------- 422

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
                                       F +L+  Y   G   +A ++++ M + G +P+
Sbjct: 423 ---------------------------GFNALVAAYSKEGFDEQALEVYSVMNKIGLVPS 455

Query: 270 VVAYSTLIHGLCSNGSMDEA-VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
              ++ LI GLC+ G +D+A + + + + +  C    T+++  +D + ++GN+ GA + W
Sbjct: 456 SPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVG--TSFTIYMDSYFRSGNVEGALKCW 513

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
           + M+  G  P+ +A++  +  LC+ +  ++A+    +M      PN +T+N+ I   C  
Sbjct: 514 DDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRV 573

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
           G V  A+KL  +M+Q   +P++ T N L+DG  +  R+    +   ++   G+  ++VTY
Sbjct: 574 GYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTY 633

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
           NTI++  C A  +  A   + KML +G + D  T+NI +++ C    +N A+++LD +  
Sbjct: 634 NTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVA 693

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            G   P+ ++Y +L+ GIC S  +  A I   K++     PN  T NV 
Sbjct: 694 MG-CMPNSVTYNTLMDGIC-SDVLDRAMILTGKLIKMAFQPNTVTVNVF 740



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 257/553 (46%), Gaps = 14/553 (2%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
            ++++   G+A +AL +   IR  G  P++     +L  L           ++  M   G
Sbjct: 146 ALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARG 205

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
             P++  +N ++   C    V     LL  M      PDA SY  ++      GQ  +A 
Sbjct: 206 PRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAF 265

Query: 156 EL--AMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           +L   MR  SG    V  YN L+N LC +  + +A  L  EMV  GI+ N IT++ ++  
Sbjct: 266 QLLDEMR-ESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDG 324

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
               G ++ +     +M  RG  P+  +F  L  G    G+  + +    + + E F   
Sbjct: 325 YAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAH-GQQELHEMFGSR 383

Query: 270 VVAYST--LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           + A S   ++  LC +G +D+A  +     E   P +V  ++AL+  ++K G    A ++
Sbjct: 384 ISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEV 443

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M   G  P+   +  ++  LC       A  L+E M  +     T +F  ++     
Sbjct: 444 YSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGT-SFTIYMDSYFR 502

Query: 388 CGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
            G V+ A+K  D M +    P+   ++  + GL R++ V EA++   E+   G   N +T
Sbjct: 503 SGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNIT 562

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA-IQLLDRI 506
           YN+++   CR G V EA +L  KM   G   D  T NI+I  +CK+G+++    + LD  
Sbjct: 563 YNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMY 622

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
             G    PD+++Y +++   C +  M  A I++ KML +G  P+  T+N+ + SL +N  
Sbjct: 623 NSG--LTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHL 680

Query: 567 HLGPVYILDDIMA 579
               V +LD+++A
Sbjct: 681 LNRAVKMLDELVA 693



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 31/290 (10%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ++G       M   GV      F + I+   R+    +A + F  +   G  P    YN 
Sbjct: 506 VEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNS 565

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           ++ A       S    +   M++ G+ P+VFT NIL+   CK  R+D   K  ++M N G
Sbjct: 566 LISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSG 625

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCE 190
             PD V+Y TI                              IN  C    +  A   + +
Sbjct: 626 LTPDVVTYNTI------------------------------INAYCGAQDMSSAMIFMNK 655

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           M+  G +P++ TY+  + SLC+   +  ++ +L ++   GC PN  ++ +L+ G +    
Sbjct: 656 MLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDG-ICSDV 714

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
              A  L  ++I+  F PN V  +      C  G    A+  + +++E+S
Sbjct: 715 LDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDS 764


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 205/385 (53%), Gaps = 6/385 (1%)

Query: 149 GQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITY 203
           G++++ARE       + F   V  YN +I+G      IE A  +L  M  +GI+P+  TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
            ++IS +C  G +E + G+  +M   G  PN  ++ +L+ GY   G    A    + M++
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G +P+V  Y+ L+H L   G M EA  +  +M +    P+  TY+ LI+G+++ GN   
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A  + N M+S G  P  V YT ++ VL + N   +A  L EK+  +   P+ + FN  I 
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G C  G V+ A  LL +M +    P+  T+N L+ G  R  +V+EA  L+ E++  GI+ 
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           + ++YNT++ G  R G + +AF +  +ML  G     +T+N +I   CK  + + A +LL
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 504 DRIRGGGEWNPDIISYTSLLWGICN 528
             +   G  +PD  +Y SL+ G+ N
Sbjct: 547 KEMVNKG-ISPDDSTYLSLIEGMGN 570



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 183/361 (50%), Gaps = 2/361 (0%)

Query: 204 STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIR 263
           S+I+  L + G ++ +   +G M   G  PN+ S+ +++ GY   G    A  + + M  
Sbjct: 178 SSIVFDLLE-GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRV 236

Query: 264 EGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLG 323
           +G  P+   Y +LI G+C  G ++EA  +  +M E    PN  TY+ LIDG+   G+L  
Sbjct: 237 KGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLER 296

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A    + M+  G  P+V  Y  +V  L       +A  +I++M  +   P+ +T+N  I 
Sbjct: 297 AFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN 356

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           G   CG    A  L ++M      P   TY  L+  L R NR+KEA +L  +I   G+  
Sbjct: 357 GYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSP 416

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           +++ +N ++ G C  G V  AF LL +M  +    D +TFN ++   C++GKV  A  LL
Sbjct: 417 DVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLL 476

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
           D ++  G   PD ISY +L+ G    G +++AF    +ML+ G  P   T+N L++ L  
Sbjct: 477 DEMKXRG-IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCK 535

Query: 564 N 564
           N
Sbjct: 536 N 536



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 212/432 (49%), Gaps = 23/432 (5%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVG--------LAEQALKMFYRIREF-------GL 61
           LL+Q+    ++ +  +F  +  S  R+         L E  LK   + REF       G 
Sbjct: 148 LLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLK---KAREFIGFMEGLGF 204

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP V  YN I+    +         I   M+  G+EP+ +TY  L+  +CK  R++ A  
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLC 176
           L  +M   G  P+AV+Y T++   C  G +E A   R+  ++ G    VS YN L++ L 
Sbjct: 265 LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 324

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
            E ++ EA  ++ EM  +GI P+ ITY+ +I+     GN + +  +  +M  +G  P   
Sbjct: 325 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHV 384

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++TSL+       R  EA DL+ +++ +G  P+V+ ++ +I G C+NG+++ A  +  +M
Sbjct: 385 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM 444

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           +  S PP+  T++ L+ G  + G +  A  + + M   G  P+ ++Y  ++    +    
Sbjct: 445 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDI 504

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  + ++M      P  +T+N  IK LC     D A +LL +M      P+ +TY  L
Sbjct: 505 KDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564

Query: 417 LDGLLRVNRVKE 428
           ++G+  V+ + E
Sbjct: 565 IEGMGNVDTLVE 576



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 188/377 (49%), Gaps = 11/377 (2%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G +PNV +YN ++        ++GA ++L  M  KG  PD+ +Y +++S +CK G++EEA
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 155 RELAMRFGSGVSV--------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
             L   F   V +        YN LI+G C +  +E AF    EMV +GI P+V TY+ +
Sbjct: 263 SGL---FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           + +L   G +  +  ++ +M  +G  P+  ++  L+ GY   G    A DL N M+ +G 
Sbjct: 320 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGI 379

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P  V Y++LI+ L     M EA  +  ++ +    P+V  ++A+IDG    GN+  A  
Sbjct: 380 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFM 439

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M      P+ V +  +++  C+     +A  L+++M      P+ +++NT I G  
Sbjct: 440 LLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYG 499

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G +  A  + D+M      P + TYN L+  L +      A EL+ E+   GI  +  
Sbjct: 500 RRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 559

Query: 447 TYNTILHGVCRAGMVVE 463
           TY +++ G+     +VE
Sbjct: 560 TYLSLIEGMGNVDTLVE 576



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 179/355 (50%), Gaps = 9/355 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I     +  I+G + +L  M+V+G+      + S+I+   + G  E+A  +F ++ E G
Sbjct: 214 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 273

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L P    YN ++D    +            M + G+ P+V TYN+L+ AL    R+  A 
Sbjct: 274 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 333

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGVS----VYNALINGL 175
            ++ EM  KG  PDA++Y  +++   + G  + A +L       G+      Y +LI  L
Sbjct: 334 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVL 393

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            + ++++EA  L  +++D+G+ P+VI ++ +I   C  GNVE +  +L +M  +   P+ 
Sbjct: 394 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDE 453

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +F +L++G    G+  EA  L + M   G  P+ ++Y+TLI G    G + +A  V  +
Sbjct: 454 VTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDE 513

Query: 296 MEENSCPPNVTTYSALIDGFAK--AGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           M      P + TY+ALI    K   G+L  A ++   M++ G SP+   Y  +++
Sbjct: 514 MLSIGFNPTLLTYNALIKCLCKNQEGDL--AEELLKEMVNKGISPDDSTYLSLIE 566



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 102/181 (56%), Gaps = 13/181 (7%)

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVN------------RVKEAFELVTEIEKCGI 441
           A++LL Q+ +     N   ++EL     R++            ++K+A E +  +E  G 
Sbjct: 145 ALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGF 204

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
           + N+V+YNTI+HG    G +  A ++L  M ++G + D+ T+  +I   CK+G++  A  
Sbjct: 205 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 264

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L D++   G   P+ ++Y +L+ G CN G ++ AF Y  +M+ +GI P+ +T+N+LV +L
Sbjct: 265 LFDKMVEIG-LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323

Query: 562 F 562
           F
Sbjct: 324 F 324



 Score = 45.4 bits (106), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 35/136 (25%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +++  + LL +MK  G+      + ++I+ Y R G  + A  +   +   G  PT+  YN
Sbjct: 468 KVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYN 527

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +                                   +K LCKN   D A +LL EM NK
Sbjct: 528 AL-----------------------------------IKCLCKNQEGDLAEELLKEMVNK 552

Query: 130 GCAPDAVSYTTIVSSI 145
           G +PD  +Y +++  +
Sbjct: 553 GISPDDSTYLSLIEGM 568


>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
 gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
          Length = 846

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 260/555 (46%), Gaps = 42/555 (7%)

Query: 42  RVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVF 101
           R G    A  +F  +   G +P++  +N ++          + + +   M   G+ PNV 
Sbjct: 196 RSGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVC 255

Query: 102 TYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF 161
           +YNIL+K  C       A+KL  EM   GC P  V+Y  +V  +C  G++ EAR L    
Sbjct: 256 SYNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 315

Query: 162 G-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI---------- 206
                 +    +N LI+G  K  ++++A     EM  RG+ P+  T++ I          
Sbjct: 316 AQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHA 375

Query: 207 ----------------------ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
                                 +  LC    ++ +  +L     +G   ++  F +L+  
Sbjct: 376 AQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAA 435

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA-VSVSYQMEENSCPP 303
           Y   G   EA +L+  M + G  P+   ++ LI GLC+ G +DEA + + + + +  C  
Sbjct: 436 YSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLS 495

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
             T+++  +D   + GN + A + W+ M   G  P+ +A++  +  LC+ +  ++A+   
Sbjct: 496 --TSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAF 553

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M      PN  T+N+ I  LC  G +  A+KL   M+Q   +P+I T N L+DGL R 
Sbjct: 554 AEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCRE 613

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
            +++    L+ ++   G+  + VTYNTI++  CRA  +  A   + KML  G + D  T+
Sbjct: 614 GKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTY 673

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           NI +++ C    +N A ++LD +   G   PD ++Y +L+ GIC S  +  A I   +++
Sbjct: 674 NIWMHSLCSNHMLNQAGKVLDELVAMG-CPPDSVTYNTLMDGIC-SDVLDRAMILTGRLI 731

Query: 544 NEGICPNFATWNVLV 558
                PN  T NV +
Sbjct: 732 KMAFQPNTITLNVFL 746



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 235/501 (46%), Gaps = 39/501 (7%)

Query: 44  GLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTY 103
           G +  A K+F  +   G +PTV  YN ++D L  E R      ++  M + G++ N  T+
Sbjct: 268 GWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITF 327

Query: 104 NILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG-------------- 149
           N+L+    K  R+D A     EM  +G  PD+ ++  I +   K G              
Sbjct: 328 NVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGS 387

Query: 150 ------------------QVEEAREL---AMRFGSGVSV--YNALINGLCKEHKIEEAFW 186
                             ++++A EL   A+  G+ +SV  +NALI    KE   EEAF 
Sbjct: 388 HMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFE 447

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
           L   M   G+ P+  T++ +I  LC+ G ++ +  +L  M  +G   +  SFT  L    
Sbjct: 448 LYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST-SFTICLDASF 506

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             G    A   W+ M + G  P+ +A+S  I+GLC    ++EA     +M      PN  
Sbjct: 507 REGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNF 566

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
           TY+++I    +AGN+  A ++   M  NG  P++     ++  LC+        +L+  M
Sbjct: 567 TYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDM 626

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
                 P+TVT+NT I   C    ++ AM  +++M    C P+I TYN  +  L   + +
Sbjct: 627 CSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHML 686

Query: 427 KEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
            +A +++ E+   G   + VTYNT++ G+C + ++  A  L G+++    + + IT N+ 
Sbjct: 687 NQAGKVLDELVAMGCPPDSVTYNTLMDGIC-SDVLDRAMILTGRLIKMAFQPNTITLNVF 745

Query: 487 IYAYCKQGKVNNAIQLLDRIR 507
           +  +CKQG    A+   +++R
Sbjct: 746 LSHFCKQGFGKRALMWAEKLR 766



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 255/564 (45%), Gaps = 30/564 (5%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
           G     ++++   G+A +AL +  R+R  G  P++     +L  L           ++  
Sbjct: 150 GALRLALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEE 209

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           M   G  P++ T+N ++   C    V  A  LL  MG  G  P+  SY  ++   C  G 
Sbjct: 210 MAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGW 269

Query: 151 VEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             +A +L     R G    V  YN L++ LC E ++ EA  L  EM   GI  N IT++ 
Sbjct: 270 SRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNV 329

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT----HEASDLWNRM 261
           +I      G ++ +     +M  RG  P+  +F  +  G    G      H+     + M
Sbjct: 330 LIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHM 389

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           + +G          L+  LC +  +D+A  +     E   P +VT ++ALI  ++K G  
Sbjct: 390 LADGM-------DMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLH 442

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTF-- 378
             A +++  M   G +P+   +  ++  LC      +A  L+E M  +  C   + T   
Sbjct: 443 EEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICL 502

Query: 379 -NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
             +F +G   C     A+K  D M +    P+   ++  ++GL R++ V EA++   E+ 
Sbjct: 503 DASFREGNAVC-----ALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMT 557

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             GI  N  TYN+I+  +CRAG + EA +L   M   G   D  T NI+I   C++GK+ 
Sbjct: 558 ARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLE 617

Query: 498 NAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
               LL  +   G   PD ++Y +++   C +  M  A  ++ KML  G  P+  T+N+ 
Sbjct: 618 MVDNLLLDMCSNG-LTPDTVTYNTIINAYCRAKDMNSAMNFMNKMLAAGCEPDIFTYNIW 676

Query: 558 VRSLFSN--LGHLGPVYILDDIMA 579
           + SL SN  L   G V  LD+++A
Sbjct: 677 MHSLCSNHMLNQAGKV--LDELVA 698



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 215/494 (43%), Gaps = 51/494 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L  +  +   + L  +M   G+  +   F  +I+ Y + G  +QA   +  ++  G
Sbjct: 295 LVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARG 354

Query: 61  LKPTVKIYNHILDALLAENRFSMI----NPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           L P    +N I          + +    +   S+M  DGM+       +L+  LC + R+
Sbjct: 355 LVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMD-------MLVCRLCWDCRL 407

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNAL 171
           D A++LL     +G       +  ++++  K G  EEA EL      +      S +N L
Sbjct: 408 DDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYL 467

Query: 172 INGLCKEHKIEEAFWLLCEMVDRG----------------------------------ID 197
           I GLC + +++EA  LL  MV +G                                  + 
Sbjct: 468 IMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQ 527

Query: 198 PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL 257
           P+ I +S  I+ LC +  V  +     +M  RG  PN  ++ S++      G   EA  L
Sbjct: 528 PDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKL 587

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
              M + G +P++   + LI GLC  G ++   ++   M  N   P+  TY+ +I+ + +
Sbjct: 588 QQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCR 647

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           A ++  A    N+M++ GC P++  Y   +  LC N+M +QA  +++++    CPP++VT
Sbjct: 648 AKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVT 707

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +NT + G+C    +D AM L  ++ +    PN  T N  L    +    K A     ++ 
Sbjct: 708 YNTLMDGICS-DVLDRAMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEKLR 766

Query: 438 KCGIQLNIVTYNTI 451
           +     +  T N I
Sbjct: 767 EDSFVFDDATRNII 780


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 224/443 (50%), Gaps = 8/443 (1%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           ++ +G   S  VF ++++ Y   G    A++ F   ++  LK        +L+ ++  + 
Sbjct: 153 LETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSS 212

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
             +    Y  +   G  PNV+T+N+L+  LCK  +V  A  +  E+   G  P AVS+ T
Sbjct: 213 PMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNT 272

Query: 141 IVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +++  CK G +EE   L M     R    V  Y+ALI+GLCKE ++E+A  L  EM DRG
Sbjct: 273 LINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PN +T++T+I+  C  G V+ +L I  QMF +G   ++  + +L+ G   GG   EA 
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
                M + G +P+   Y+TL+ G C  G ++ A+ +  +M +     +   ++A+I G 
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            + G ++ A +    M+  G  P+   YT ++   C+         L+++M  +   P  
Sbjct: 453 CRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGV 512

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           +T+N  + GLC  G+V  A  LL+ M     +P+  TYN LL G  +  ++ +   + TE
Sbjct: 513 ITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTE 572

Query: 436 IEKCGIQLNIVTYNTILHGVCRA 458
           +   G+  +  +Y ++LH + +A
Sbjct: 573 M---GLVSDYASYRSLLHELSKA 592



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 182/330 (55%), Gaps = 1/330 (0%)

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G  PN+++F  L+      G+  +A  +++ + + G  P  V+++TLI+G C +G+++E 
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             +   MEE    P+V TYSALIDG  K   L  A+ ++  M   G  PN V +T ++  
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLING 346

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C+N     A  + ++M  +    + V +NT I GLC  G    A K + +M +   +P+
Sbjct: 347 QCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPD 406

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
             TY  LLDG  +   ++ A E+  E+ K GIQL+ V +  I+ G+CR G +V+A + L 
Sbjct: 407 KFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLR 466

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +ML  G K D  T+ +++  +CK+G V    +LL  ++  G   P +I+Y  L+ G+C  
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHI-PGVITYNVLMNGLCKQ 525

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           G ++ A + L  MLN G+ P+  T+N+L++
Sbjct: 526 GQVKNADMLLNAMLNLGVVPDDITYNILLQ 555



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 193/381 (50%), Gaps = 10/381 (2%)

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A     E++D G  PNV T++ +++ LC  G V+ +  I  ++   G  P   SF +L+ 
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 244 GYLLGGRTHEASDLWNRMIREGF--LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           GY   G   E   L  +M+ E F   P+V  YS LI GLC    +++A  +  +M +   
Sbjct: 276 GYCKSGNLEEGFRL--KMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGL 333

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            PN  T++ LI+G  K G +  A +I+ +M + G   ++V Y  ++  LC+   F +A  
Sbjct: 334 VPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARK 393

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
            + +M      P+  T+ T + G C  G ++ A+++  +M +     +   +  ++ GL 
Sbjct: 394 FVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLC 453

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           R  ++ +A   + E+ + G++ +  TY  ++ G C+ G V   F+LL +M  +G     I
Sbjct: 454 RDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVI 513

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N+++   CKQG+V NA  LL+ +   G   PD I+Y  LL G C  G + +     Q 
Sbjct: 514 TYNVLMNGLCKQGQVKNADMLLNAMLNLGVV-PDDITYNILLQGHCKHGKLGD----FQN 568

Query: 542 MLNE-GICPNFATWNVLVRSL 561
           +  E G+  ++A++  L+  L
Sbjct: 569 VKTEMGLVSDYASYRSLLHEL 589



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 158/326 (48%), Gaps = 5/326 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++ +L ++ ++   Q +  +++  G+  +   F ++IN Y + G  E+  ++   + EF 
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ ++D L  E +    N ++  M   G+ PN  T+  L+   CKN RVD A 
Sbjct: 298 VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLAL 357

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR----ELAMR-FGSGVSVYNALINGL 175
           ++  +M  KG   D V Y T++  +CK G   EAR    E+  R        Y  L++G 
Sbjct: 358 EIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGS 417

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE  +E A  +  EMV  GI  + + ++ IIS LC  G +  +   L +M   G  P+ 
Sbjct: 418 CKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDD 477

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++T ++ G+   G       L   M  +G +P V+ Y+ L++GLC  G +  A  +   
Sbjct: 478 GTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNA 537

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNL 321
           M      P+  TY+ L+ G  K G L
Sbjct: 538 MLNLGVVPDDITYNILLQGHCKHGKL 563



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           L++   K  + + A + +  ++ +G  PNV  +  ++  LC+      A  + +++    
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG 262

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             P  V+FNT I G C  G ++   +L   M+++   P++ TY+ L+DGL +  ++++A 
Sbjct: 263 LQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDAN 322

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
            L  E+   G+  N VT+ T+++G C+ G V  A ++  +M  +G K D + +N +I   
Sbjct: 323 HLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGL 382

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
           CK G    A + +  +   G   PD  +YT+LL G C  G ++ A    ++M+ EGI  +
Sbjct: 383 CKGGYFREARKFVGEMTKRG-LIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLD 441

Query: 551 FATWNVLVRSL 561
              +  ++  L
Sbjct: 442 NVAFTAIISGL 452



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 2/164 (1%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           ++M  EG+      F ++I+   R G    A +    +   GLKP    Y  ++D    +
Sbjct: 431 KEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKK 490

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
               M   +   M+ DG  P V TYN+L+  LCK  +V  A  LL  M N G  PD ++Y
Sbjct: 491 GDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITY 550

Query: 139 TTIVSSICKLGQVEEARELAMRFG--SGVSVYNALINGLCKEHK 180
             ++   CK G++ + + +    G  S  + Y +L++ L K  K
Sbjct: 551 NILLQGHCKHGKLGDFQNVKTEMGLVSDYASYRSLLHELSKASK 594



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 107/242 (44%), Gaps = 24/242 (9%)

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEK-----------------MAFENCPPNTVTFN 379
           S  V +Y  MV  L  + M  QA SL+                   +  +    ++  F+
Sbjct: 107 SHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFD 166

Query: 380 TFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC 439
             +      G V  A++     K++           LL+ +++++    A E   EI   
Sbjct: 167 ALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDS 226

Query: 440 GIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNA 499
           G   N+ T+N +++ +C+ G V +A  +  ++   G +  A++FN +I  YCK G +   
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286

Query: 500 IQL---LDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
            +L   ++  R      PD+ +Y++L+ G+C    +++A    ++M + G+ PN  T+  
Sbjct: 287 FRLKMVMEEFR----VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTT 342

Query: 557 LV 558
           L+
Sbjct: 343 LI 344



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 3/155 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L    +I   +  L++M   G+   +G +  V++ + + G  +   K+   ++  G
Sbjct: 448 IISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDG 507

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +++ L  + +    + + + M   G+ P+  TYNILL+  CK+ ++    
Sbjct: 508 HIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQ 567

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +  EM   G   D  SY +++  + K  +  + R
Sbjct: 568 NVKTEM---GLVSDYASYRSLLHELSKASKDRQKR 599


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 267/539 (49%), Gaps = 36/539 (6%)

Query: 36  VINSYRRVGLAEQALKM----FYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++NS R +  A+ A+ +    F+R+      P ++ +N +   +     F+    +   +
Sbjct: 43  LLNSIRTLQSADAAVSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTL 102

Query: 92  KRDGME-PNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
              G E  +V T NIL+  LC+  +    + +L  M   G  P  V+  TI + +C    
Sbjct: 103 HSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLC---- 158

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                               ++NGLCK      A   L +MV R ++PNV+ Y+ I+  L
Sbjct: 159 --------------------IVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGL 198

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG--GRTHEASDLWNRMIRE-GFL 267
           C  G V  +LG+  +M V    PN+ ++  L++G L G  G   E   L+N M+ E G +
Sbjct: 199 CKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQG-LCGEVGGWREGVGLFNEMVAEKGIV 257

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           P+V  +S L++G C  G +  A S+   M       NV TY++LI G+     +  A ++
Sbjct: 258 PDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRV 317

Query: 328 WNRMI--SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++ M+    GC P+VV Y  ++   C+    ++A SL+ +M  +   P+  T+ + I G 
Sbjct: 318 FDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGF 377

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G+   A +L   MK    +P + T   +LDGL +     EA  L   +EK G+ L+I
Sbjct: 378 FEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDI 437

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V YN +L G+C+ G + +A +LL  +L++G K+D+ T+NI+I   C++G +++A +LL +
Sbjct: 438 VIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRK 497

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
           ++  G   P+  SY   + G+     +  +  YLQ M ++G   +  T  +L+R L +N
Sbjct: 498 MKENG-CPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAELLIRFLSAN 555



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 207/414 (50%), Gaps = 14/414 (3%)

Query: 34  ISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKR 93
           + ++N   ++G    AL+   ++ +  L+P V +YN ILD L           ++  M  
Sbjct: 157 LCIVNGLCKIGDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGV 216

Query: 94  DGMEPNVFTYNILLKALCKNNRVDG---AYKLLVEM-GNKGCAPDAVSYTTIVSSICKLG 149
             +EPNV TYN L++ LC    V G      L  EM   KG  PD  +++ +V+  CK G
Sbjct: 217 VNVEPNVVTYNCLIQGLC--GEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEG 274

Query: 150 QVEEARELA---MRFGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDRGID--PNVIT 202
            +  A  +    +R G  ++V  YN+LI+G C  +++EEA  +   MV  G    P+V+T
Sbjct: 275 LLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVT 334

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+++I   C V  V  ++ +L +M  +G +P++ ++TSL+ G+   G+   A +L+  M 
Sbjct: 335 YNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMK 394

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
            +G +P +   + ++ GL       EA+++   ME++    ++  Y+ ++DG  K G L 
Sbjct: 395 DQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLN 454

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A ++ + ++  G   +   +  M+K LC+  +   A  L+ KM    CPPN  ++N F+
Sbjct: 455 DARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFV 514

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEI 436
           +GL     +  + K L  MK  +  P   T  ELL   L  N    AF+   +I
Sbjct: 515 QGLLRKYDISRSRKYLQIMKD-KGFPVDATTAELLIRFLSANEEDNAFQEFLQI 567



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 177/366 (48%), Gaps = 15/366 (4%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE-----NRFSMINP 86
           V+ ++++   + GL  +AL +FY +    ++P V  YN ++  L  E         + N 
Sbjct: 190 VYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNE 249

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           + +     G+ P+V T++IL+   CK   +  A  ++  M   G   + V+Y +++S  C
Sbjct: 250 MVA---EKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYC 306

Query: 147 KLGQVEEAR---ELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
              ++EEA    +L +R G G    V  YN+LI+G CK  K+ +A  LL EMV +G+DP+
Sbjct: 307 LRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPD 366

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V T++++I    +VG    +  +   M  +G  P + +   +L G        EA  L+ 
Sbjct: 367 VFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFR 426

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            M + G   ++V Y+ ++ G+C  G +++A  +   +       +  T++ +I G  + G
Sbjct: 427 AMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREG 486

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFN 379
            L  A ++  +M  NGC PN  +Y   V+ L +     ++   ++ M  +  P +  T  
Sbjct: 487 LLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDATTAE 546

Query: 380 TFIKGL 385
             I+ L
Sbjct: 547 LLIRFL 552



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 7/217 (3%)

Query: 21  MKVEGVSCSEGV--FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           M  EG  C   V  + S+I+ + +V    +A+ +   +   GL P V  +  ++      
Sbjct: 321 MVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEV 380

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
            +      ++  MK  G  P + T  ++L  L K      A  L   M   G   D V Y
Sbjct: 381 GKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIY 440

Query: 139 TTIVSSICKLGQVEEARE-LAMRFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVD 193
             ++  +CK+G++ +AR+ L+     G+ +    +N +I GLC+E  +++A  LL +M +
Sbjct: 441 NIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKE 500

Query: 194 RGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
            G  PN  +Y+  +  L    ++  S   L  M  +G
Sbjct: 501 NGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKG 537



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 15/220 (6%)

Query: 361 SLIEKMAFENCPPN-------TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
           SL     F   PP+       T   N+          V  ++    +M      P I  +
Sbjct: 20  SLSNTHPFSTSPPSISDAAARTRLLNSIRTLQSADAAVSVSVDFFHRMLTLNPFPCIQDF 79

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILHGVCRAGMVVEAFQLLGKML 472
           N L   + +      A  L+  +   G ++ ++ T N +++ +CR       F +LG M 
Sbjct: 80  NLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILINCLCRLRKTTLGFAVLGLMT 139

Query: 473 IEGTKLDAITFNII------IYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
             G +   +T N I      +   CK G  + A++ L ++       P+++ Y ++L G+
Sbjct: 140 KIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKR-NLEPNVVVYNAILDGL 198

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           C  G + EA     +M    + PN  T+N L++ L   +G
Sbjct: 199 CKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVG 238



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 1/136 (0%)

Query: 8   KCEIDG-VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           KC +D     L + M+  G+     ++  +++   ++G    A K+   +   GLK    
Sbjct: 414 KCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSY 473

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            +N ++  L  E        +   MK +G  PN  +YN+ ++ L +   +  + K L  M
Sbjct: 474 TWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIM 533

Query: 127 GNKGCAPDAVSYTTIV 142
            +KG   DA +   ++
Sbjct: 534 KDKGFPVDATTAELLI 549


>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 472

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 205/394 (52%), Gaps = 12/394 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+ +L    +    + ++ +MK+E    SE + +S+   Y RV     +L++F+++++F 
Sbjct: 57  MVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFD 116

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN-RVDGA 119
             P+ K Y  +L  L+ EN+ ++    Y NM+  G+ P V + N+L+KALC+N+  VD  
Sbjct: 117 CDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAG 176

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALING 174
            K+  EM  +GC PD+ +Y T++S +C+ G+++EA++L            V  Y +LING
Sbjct: 177 LKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLING 236

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           LC    ++EA   + EM  +GI+PNV TYS+++  LC  G    ++ +   M  RGC PN
Sbjct: 237 LCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPN 296

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
           + ++T+L+ G     +  EA +L +RM  +G  P+   Y  +I G C+     EA +   
Sbjct: 297 MVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLD 356

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLL------GASQIWNRMISNGCSPNVVAYTCMVK 348
           +M      PN  T++  +    +    L       A  ++  M S G S  V     +VK
Sbjct: 357 EMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVK 416

Query: 349 VLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            LC+   F +A  L++++  + C PN  T+   I
Sbjct: 417 CLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 213/432 (49%), Gaps = 47/432 (10%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN----NRVDGAYKLL 123
           + +++  L++ N+F     I + MK   +E  V + +ILL ++C+     +R   + ++ 
Sbjct: 54  FGYMVSRLVSANKFKAAEDIVARMK---IENCVVSEDILL-SICRGYGRVHRPFDSLRVF 109

Query: 124 VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEE 183
            +M +  C P   +Y T+++                               L +E+++  
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAI------------------------------LVEENQLNL 139

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLC-DVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           AF     M + G+ P V + + +I +LC + G V+  L I  +M  RGC+P+ +++ +L+
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLI 199

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G    GR  EA  L+  M+ +   P VV Y++LI+GLC + ++DEA+    +M+     
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIE 259

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           PNV TYS+L+DG  K G  L A +++  M++ GC PN+V YT ++  LC+     +A  L
Sbjct: 260 PNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVEL 319

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN-------ITTYNE 415
           +++M  +   P+   +   I G C   +   A   LD+M      PN       + T NE
Sbjct: 320 LDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNE 379

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           ++ GL   N    AF L   +   GI + + T ++++  +C+ G   +A QL+ +++ +G
Sbjct: 380 VVRGLC-TNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDG 438

Query: 476 TKLDAITFNIII 487
              +  T+ ++I
Sbjct: 439 CIPNKGTWKLLI 450



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 185/389 (47%), Gaps = 14/389 (3%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD---LW 258
           ++  ++S L      + +  I+ +M +  C  +     S+ +GY   GR H   D   ++
Sbjct: 53  SFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGY---GRVHRPFDSLRVF 109

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK- 317
           ++M      P+  AY T++  L     ++ A      M E   PP V + + LI    + 
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
            G +    +I++ M   GC P+   Y  ++  LC+     +A  L  +M  ++C P  VT
Sbjct: 170 DGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + + I GLCG   VD AM+ +++MK     PN+ TY+ L+DGL +  R  +A EL   + 
Sbjct: 230 YTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             G + N+VTY T++ G+C+   + EA +LL +M ++G K DA  +  +I  +C   K  
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFR 349

Query: 498 NAIQLLDRIRGGG------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
            A   LD +  GG       WN  + +   ++ G+C +   +   +YL  M + GI    
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSRAFTLYLS-MRSRGISVEV 408

Query: 552 ATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            T + LV+ L         V ++D+I+ +
Sbjct: 409 ETLDSLVKCLCKKGEFQKAVQLVDEIVTD 437



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 196/411 (47%), Gaps = 18/411 (4%)

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCD-VGNVE---TSLG 221
           S +  +++ L   +K + A     ++V R    N +    I+ S+C   G V     SL 
Sbjct: 52  SSFGYMVSRLVSANKFKAAE----DIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLR 107

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +  +M    C+P+  ++ ++L   +   + + A   +  M   G  P V + + LI  LC
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167

Query: 282 SN-GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
            N G++D  + + ++M +  C P+  TY  LI G  + G +  A +++  M+   C+P V
Sbjct: 168 RNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
           V YT ++  LC +    +A   +E+M  +   PN  T+++ + GLC  GR   AM+L + 
Sbjct: 228 VTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEM 287

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           M    C PN+ TY  L+ GL +  +++EA EL+  +   G++ +   Y  ++ G C    
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSK 347

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNI-------IIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
             EA   L +M++ G   + +T+NI       ++   C     + A  L   +R  G  +
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYP-SRAFTLYLSMRSRG-IS 405

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            ++ +  SL+  +C  G  Q+A   + +++ +G  PN  TW +L+     N
Sbjct: 406 VEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDN 456



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 154/332 (46%), Gaps = 37/332 (11%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G+L +  ++  ++  L S      A  +  +M+  +C  +     ++  G+ +      +
Sbjct: 46  GYLHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDS 105

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++++M    C P+  AY  ++ +L + N  + A    + M     PP   + N  IK 
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165

Query: 385 LC-------------------GC-----------------GRVDWAMKLLDQMKQYECLP 408
           LC                   GC                 GR+D A KL  +M + +C P
Sbjct: 166 LCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225

Query: 409 NITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLL 468
            + TY  L++GL     V EA   V E++  GI+ N+ TY++++ G+C+ G  ++A +L 
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285

Query: 469 GKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
             M+  G + + +T+  +I   CK+ K+  A++LLDR+   G   PD   Y  ++ G C 
Sbjct: 286 EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQG-LKPDAGLYGKVISGFCA 344

Query: 529 SGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
               +EA  +L +M+  GI PN  TWN+ V++
Sbjct: 345 VSKFREAANFLDEMILGGITPNRLTWNIHVKT 376



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 13/291 (4%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +  +M   G       + ++I+   R G  ++A K+F  + E    PTV  Y  
Sbjct: 173 VDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++ L               MK  G+EPNVFTY+ L+  LCK+ R   A +L   M  +G
Sbjct: 233 LINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMR-----FGSGVSVYNALINGLCKEHKIEEAF 185
           C P+ V+YTT+++ +CK  +++EA EL  R           +Y  +I+G C   K  EA 
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAA 352

Query: 186 WLLCEMVDRGIDPNVITY-------STIISSLCDVGNVETSLGILGQMFVRGCNPNIHSF 238
             L EM+  GI PN +T+       + ++  LC       +  +   M  RG +  + + 
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-TNYPSRAFTLYLSMRSRGISVEVETL 411

Query: 239 TSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
            SL+K     G   +A  L + ++ +G +PN   +  LI     N  + EA
Sbjct: 412 DSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEA 462



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 127/252 (50%), Gaps = 10/252 (3%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC-GCGRV 391
           +NG   +  ++  MV  L   N F  A  ++ +M  ENC    V     +  +C G GRV
Sbjct: 44  ANGYLHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENC----VVSEDILLSICRGYGRV 99

Query: 392 DW---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
                ++++  +MK ++C P+   Y  +L  L+  N++  AF+    + + G+   + + 
Sbjct: 100 HRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASL 159

Query: 449 NTILHGVCRAGMVVEA-FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           N ++  +CR    V+A  ++  +M   G   D+ T+  +I   C+ G+++ A +L   + 
Sbjct: 160 NVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMV 219

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGH 567
              +  P +++YTSL+ G+C S  + EA  Y+++M  +GI PN  T++ L+  L  +   
Sbjct: 220 -EKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRS 278

Query: 568 LGPVYILDDIMA 579
           L  + + + +MA
Sbjct: 279 LQAMELFEMMMA 290



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 8/167 (4%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L ++ +I     LL +M ++G+    G++  VI+ +  V    +A      +   G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGG 362

Query: 61  LKPT-------VKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN 113
           + P        VK  N ++  L   N  S    +Y +M+  G+   V T + L+K LCK 
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCT-NYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKK 421

Query: 114 NRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR 160
                A +L+ E+   GC P+  ++  ++        V EA +  +R
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEASDSLLR 468


>gi|224135537|ref|XP_002322098.1| predicted protein [Populus trichocarpa]
 gi|222869094|gb|EEF06225.1| predicted protein [Populus trichocarpa]
          Length = 668

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 256/531 (48%), Gaps = 63/531 (11%)

Query: 48  QALKMFYRIREFGLK--PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNI 105
           + L + +R+ EF  +  P++  YN ++D   + +  ++ + +  +M   G  P++ +Y  
Sbjct: 138 RTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTT 197

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL------AM 159
           L+    K   +  AYKL  EM   G  P+++SY+ ++  + +   +E  REL       M
Sbjct: 198 LVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRM 257

Query: 160 RFGSGVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGN 215
           R     SV    ++ L++ LC+E    E F +  EM           Y  +I SLC VG 
Sbjct: 258 RHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVG- 316

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
                                             R+H AS +   M ++GF P+VV+Y++
Sbjct: 317 ----------------------------------RSHGASRVVYIMRKKGFTPSVVSYNS 342

Query: 276 LIHGLCSNGS-------MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           +IHGLC  G        ++E V   Y + E        TY  L++   +A +L  A ++ 
Sbjct: 343 IIHGLCKEGGCMRAYQLLEEGVGFGYLLSE-------YTYKVLVEALCQAMDLDKAREVL 395

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M++ G       Y   ++ LC  N   +  +++  M   NC P+ +T NT I G C  
Sbjct: 396 KVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCKM 455

Query: 389 GRVDWAMKLL-DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVT 447
           GRV+ A+K+L D M      P+  T+  ++ GLL V R +EA  L+ ++ + GI   +VT
Sbjct: 456 GRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVT 515

Query: 448 YNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR 507
           YN IL G+ +  +  EA  +  +M+ +G   ++ T++II+   C+ G+++ A +  D + 
Sbjct: 516 YNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYSIIVEGLCESGQIDGAKKFWDEVI 575

Query: 508 GGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
              + + D + Y ++L G+C SG + EA  +L ++++ G+ PN  ++N+++
Sbjct: 576 WPSKIHDDFV-YAAILKGLCRSGHLNEAIHFLYELVDSGVNPNIVSYNIVI 625



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 227/465 (48%), Gaps = 11/465 (2%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA----ENRFSMINPIY 88
           + +++N Y ++G    A K+F  + E+G+ P    Y+ ++  +L     E    +++ ++
Sbjct: 195 YTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLF 254

Query: 89  SNMKRDGMEP-NVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
             M+ +  +  N   ++ L+  LC+    +  + +  EM       +  +Y  ++ S+CK
Sbjct: 255 QRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCK 314

Query: 148 LGQVEEARELA--MR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
           +G+   A  +   MR   F   V  YN++I+GLCKE     A+ LL E V  G   +  T
Sbjct: 315 VGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYT 374

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y  ++ +LC   +++ +  +L  M  +G       +   L+   L     E  ++   M+
Sbjct: 375 YKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSML 434

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSV-SYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           +    P+V+  +T+I+G C  G ++EA+ V +  M      P+  T++++I G    G  
Sbjct: 435 QTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRS 494

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A  +  +M+  G +P VV Y  +++ L +  +  +A ++ ++M  +    N+ T++  
Sbjct: 495 QEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYSII 554

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           ++GLC  G++D A K  D++     + +   Y  +L GL R   + EA   + E+   G+
Sbjct: 555 VEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYELVDSGV 614

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNII 486
             NIV+YN ++   C  GM  EA+Q+ G+M   G   DA+T+  +
Sbjct: 615 NPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWRTL 659



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 218/466 (46%), Gaps = 13/466 (2%)

Query: 110 LCKNNR-VDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVY 168
           LC  +R VD A +LL  +  +G  PD+++ ++I+  +C   +  EA +  + F + + V 
Sbjct: 59  LCTKHRNVDEALRLLDHLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVP 118

Query: 169 -----NALINGLCKEHKIEEAFWLLCEMVDRGID--PNVITYSTIISSLCDVGNVETSLG 221
                N L+  L           ++  +++   +  P++I Y+ +I   C V     +  
Sbjct: 119 DERTCNVLVARLLHSKDPFRTLNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHR 178

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L  M  RG  P+I S+T+L+ GY   G   +A  L++ M   G +PN ++YS LI G+ 
Sbjct: 179 MLYDMINRGHCPSIVSYTTLVNGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVL 238

Query: 282 SNGSMD---EAVSVSYQM--EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
               ++   E + V +Q    E     N   +  L+D   + G       I   M     
Sbjct: 239 RKRDIERGRELMHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNR 298

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMK 396
                AY  ++  LC+    H A  ++  M  +   P+ V++N+ I GLC  G    A +
Sbjct: 299 VNEDFAYGHLIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQ 358

Query: 397 LLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVC 456
           LL++   +  L +  TY  L++ L +   + +A E++  +   G       YN  L  +C
Sbjct: 359 LLEEGVGFGYLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALC 418

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
                 E   +L  ML    + D IT N +I  +CK G+V  A+++L+ +  G    PD 
Sbjct: 419 LMNNPTELLNVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDA 478

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           +++TS++ G+ N G  QEA   L +ML +GI P   T+N ++R LF
Sbjct: 479 VTFTSIISGLLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLF 524



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 219/480 (45%), Gaps = 14/480 (2%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK------- 147
           G  P+    + ++  LC  NR + A++ L+      C PD  +   +V+ +         
Sbjct: 80  GYLPDSLNLSSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRT 139

Query: 148 LGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
           L  +    E    F   +  YN LI+  C       A  +L +M++RG  P++++Y+T++
Sbjct: 140 LNVIHRLIEFKPEFVPSLINYNRLIDQFCSVSLPNVAHRMLYDMINRGHCPSIVSYTTLV 199

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDL----WNRMIR 263
           +    +G +  +  +  +M   G  PN  S++ L++G L         +L    + RM  
Sbjct: 200 NGYSKIGEISDAYKLFDEMPEWGVVPNSLSYSLLIRGVLRKRDIERGRELMHVLFQRMRH 259

Query: 264 EGFLP-NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
           E     N  A+  L+  LC  G  +E   ++ +M + +       Y  LID   K G   
Sbjct: 260 EEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLIDSLCKVGRSH 319

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
           GAS++   M   G +P+VV+Y  ++  LC+     +A+ L+E+        +  T+   +
Sbjct: 320 GASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYLLSEYTYKVLV 379

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
           + LC    +D A ++L  M     +     YN  L  L  +N   E   ++  + +   Q
Sbjct: 380 EALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNVLVSMLQTNCQ 439

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLI-EGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
            +++T NT+++G C+ G V EA ++L  M+  + +  DA+TF  II      G+   A  
Sbjct: 440 PDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLLNVGRSQEARN 499

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           LL ++   G   P +++Y ++L G+      +EA     +M+ +G+  N  T++++V  L
Sbjct: 500 LLLQMLEKG-ITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQTYSIIVEGL 558



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 187/412 (45%), Gaps = 42/412 (10%)

Query: 14  VQYLLQQMK-VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHIL 72
           +  L Q+M+  E  S +   F ++++   R GL  +   +   + +         Y H++
Sbjct: 250 MHVLFQRMRHEEDQSVNSAAFDNLVDCLCREGLFNEVFMIAEEMPQGNRVNEDFAYGHLI 309

Query: 73  DALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           D+L    R    + +   M++ G  P+V +YN ++  LCK      AY+LL E    G  
Sbjct: 310 DSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFGYL 369

Query: 133 PDAVSYTTIVSSICKLGQVEEARE-LAMRFGSG----VSVYNALINGLCKEHKIEEAFWL 187
               +Y  +V ++C+   +++ARE L +    G      +YN  +  LC  +   E   +
Sbjct: 370 LSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELLNV 429

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFV-RGCNPNIHSFTSLLKGYL 246
           L  M+     P+VIT +T+I+  C +G VE +L +L  M   +   P+  +FTS++ G L
Sbjct: 430 LVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISGLL 489

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
             GR+ EA +L  +M+ +G  P VV Y+ ++ GL       EA++V  +M  +    N  
Sbjct: 490 NVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAANSQ 549

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMI---------------------------------- 332
           TYS +++G  ++G + GA + W+ +I                                  
Sbjct: 550 TYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLYEL 609

Query: 333 -SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
             +G +PN+V+Y  ++   C   M  +A+ +  +M      P+ VT+ T  K
Sbjct: 610 VDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWRTLDK 661



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 172/358 (48%), Gaps = 41/358 (11%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +I+S  +VG +  A ++ Y +R+ G  P+V  YN I+  L  E        +       G
Sbjct: 308 LIDSLCKVGRSHGASRVVYIMRKKGFTPSVVSYNSIIHGLCKEGGCMRAYQLLEEGVGFG 367

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG------------------------- 130
              + +TY +L++ALC+   +D A ++L  M NKG                         
Sbjct: 368 YLLSEYTYKVLVEALCQAMDLDKAREVLKVMLNKGGMDRTRIYNIYLRALCLMNNPTELL 427

Query: 131 ----------CAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSV-YNALING 174
                     C PD ++  T+++  CK+G+VEEA +     +  +F +  +V + ++I+G
Sbjct: 428 NVLVSMLQTNCQPDVITLNTVINGFCKMGRVEEALKVLNDMMTGKFSAPDAVTFTSIISG 487

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
           L    + +EA  LL +M+++GI P V+TY+ I+  L  +   + ++ +  +M   G   N
Sbjct: 488 LLNVGRSQEARNLLLQMLEKGITPGVVTYNAILRGLFKLQLTKEAMAVFDEMITDGVAAN 547

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
             +++ +++G    G+   A   W+ +I    + +   Y+ ++ GLC +G ++EA+   Y
Sbjct: 548 SQTYSIIVEGLCESGQIDGAKKFWDEVIWPSKIHDDFVYAAILKGLCRSGHLNEAIHFLY 607

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
           ++ ++   PN+ +Y+ +ID     G    A QI   M  NG +P+ V +  + K+  Q
Sbjct: 608 ELVDSGVNPNIVSYNIVIDRACSLGMKREAYQIAGEMQKNGLTPDAVTWRTLDKLHGQ 665


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 256/533 (48%), Gaps = 46/533 (8%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +Y  M   G+ P+V T+  +L  LCK+ ++     LL EMG  G   + VSYT ++ ++ 
Sbjct: 11  LYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALF 70

Query: 147 KLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G+V EA   LA     G    V     LI+GL K  +I+EA +L C +    + PN I
Sbjct: 71  KAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYI 130

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TYS +I   C +G++  +   L +M  + C PN+ +++SL+ GY+  G  H+A  +  +M
Sbjct: 131 TYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 190

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           + +  +PN+  Y+ L+ G    G  D A+ +  +M++     NV    A ++   ++G +
Sbjct: 191 VHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRM 250

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A ++  +M S G  P++V YT ++    ++     A +L ++M  +N   + VTFN  
Sbjct: 251 EEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVL 310

Query: 382 IKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGI 441
           I  L   G+ D    +   M++    P++ TYN +L+G  +      A EL  E++   +
Sbjct: 311 INCLFKLGKSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKL 369

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG-------------------------- 475
             N +T N +++G+C AG +  A  +L +M++ G                          
Sbjct: 370 IPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQ 429

Query: 476 ---------TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
                     K+D   +NI+I   CK G    A  +L  +   G    D  +Y +L+ G 
Sbjct: 430 THELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII-ADTTTYNALIHGY 488

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           C S  ++ AF+    ML+E + P+  T+N+L+      L   G ++  DD+++
Sbjct: 489 CISSHLKRAFMTYSTMLSERVSPDIETYNLLL----GGLSKAGLIHEADDLLS 537



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 263/609 (43%), Gaps = 76/609 (12%)

Query: 47  EQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNIL 106
           E+AL ++  +   G+ P V  +  IL  L    + S    +   M + GM  N  +Y IL
Sbjct: 6   EEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTIL 65

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRF 161
           L AL K  +V  A   L  M  +G   D ++ T ++  + K GQ++EA  L      +  
Sbjct: 66  LDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNL 125

Query: 162 GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLG 221
                 Y+ALI+G CK   I  A   L EM ++   PNVITYS++I+     G +  +  
Sbjct: 126 VPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFK 185

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
           +L +M  +   PNI ++  LL G    G    A DL+++M + G   NV      ++ + 
Sbjct: 186 VLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMK 245

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL-------------------- 321
            +G M+EA  +  +M      P++  Y+ L+DGF K+G +                    
Sbjct: 246 RSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIV 305

Query: 322 -----------LGASQ---IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
                      LG S    I++ M   G SP++  Y  M+    +   +  A  L  +M 
Sbjct: 306 TFNVLINCLFKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 365

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM---------KQYECLPNITT------ 412
                PN +T N  I GLC  GR++ A+ +L +M           Y  L NI++      
Sbjct: 366 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 425

Query: 413 --------------------YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL 452
                               YN L+  L ++   ++A  ++ ++E+ GI  +  TYN ++
Sbjct: 426 TILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALI 485

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEW 512
           HG C +  +  AF     ML E    D  T+N+++    K G ++ A  LL  I+  G  
Sbjct: 486 HGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRG-L 544

Query: 513 NPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVY 572
            P+  +Y +L+ G C     +E      +M+ +G  P    +N+L+   FS +G +    
Sbjct: 545 VPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLI-GYFSKMGKMKQAK 603

Query: 573 ILDDIMANK 581
            L + M  K
Sbjct: 604 ELMNEMQTK 612



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/533 (24%), Positives = 245/533 (45%), Gaps = 7/533 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +I   +YL   +    +  +   + ++I+   ++G    A    + + E  
Sbjct: 100 LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKD 159

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ +++  + +        +   M      PN+ TY ILL    K    D A 
Sbjct: 160 CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIAL 219

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            L  +M   G   +       V+++ + G++EEA EL  +  SG     +  Y  L++G 
Sbjct: 220 DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 279

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K+  A  L  EM  + +  +++T++ +I+ L  +G  +T   I   M   G +P++
Sbjct: 280 LKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDL 338

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ ++L G    G    A +LWN M     +PN +  + +I+GLC  G M+ A+ +  +
Sbjct: 339 ATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKE 398

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P  TTY  L++  +K+       Q    +++     +   Y  ++  LC+  M
Sbjct: 399 MVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGM 458

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A ++++ M       +T T+N  I G C    +  A      M      P+I TYN 
Sbjct: 459 TRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNL 518

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           LL GL +   + EA +L++EI+K G+  N  TY T++ G C+     E  ++  +M+I+G
Sbjct: 519 LLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKG 578

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
                  +N++I  + K GK+  A +L++ ++  G  +P   +Y  L+ G CN
Sbjct: 579 FIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKG-VSPTCTTYDILICGWCN 630



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 190/384 (49%), Gaps = 2/384 (0%)

Query: 178 EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS 237
           ++ +EEA  L  EMV  GI P+V+T+ +I+  LC  G +     +L +M   G N N  S
Sbjct: 2   QNGLEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVS 61

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQME 297
           +T LL      G+  EA      MI  G   +V+A + LI GL  +G + EA  +   + 
Sbjct: 62  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 121

Query: 298 ENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFH 357
           + +  PN  TYSALIDG  K G++ GA    + M    C PNV+ Y+ ++    +  + H
Sbjct: 122 QLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 181

Query: 358 QAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
            A  ++ KM  +N  PN  T+   + G    G  D A+ L  +MKQ     N+   +  +
Sbjct: 182 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 241

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           + + R  R++EA ELV ++   G++ ++V Y  ++ G  ++G V  A  L  +M  +   
Sbjct: 242 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            D +TFN++I    K GK +    +   +R  G  +PD+ +Y ++L G    G    A  
Sbjct: 302 FDIVTFNVLINCLFKLGKSDTE-SIYSAMREMG-LSPDLATYNTMLNGNFKKGNWTSALE 359

Query: 538 YLQKMLNEGICPNFATWNVLVRSL 561
              +M +  + PN  T N+++  L
Sbjct: 360 LWNEMKSRKLIPNAITCNIMINGL 383



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 20/210 (9%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M  E VS     +  ++    + GL  +A  +   I++ GL P    Y  ++        
Sbjct: 504 MLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRN 563

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 IY  M   G  P    YN+L+    K  ++  A +L+ EM  KG +P   +Y  
Sbjct: 564 TKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDI 623

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           ++   C L ++ +        GS + + Y A            EA  L  EM DRG  P 
Sbjct: 624 LICGWCNLLKMPD-------LGSTLKISYRA------------EAKRLFIEMNDRGFVPC 664

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVR 229
             T + I S+    G    +  +L   + R
Sbjct: 665 ESTQACISSTFAAPGKKADARMLLKSTYKR 694


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 251/519 (48%), Gaps = 12/519 (2%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           ++ S+  +G  ++A+ M   ++  GL    +I N ++D  LA         ++  M    
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA- 154
           + P+  +Y +++   C+  R+    + L +M  +G A D  + T ++S+  + G V  A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 155 ----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
               + + M     +  +++LINGLCK   I++AF +L EMV +G  PNV T++ +I  L
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 211 CDVGNVETSLGILGQMFVRGCN--PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           C  G  E +  +  ++ VR  N  PN++++T ++ GY    + + A  L  RM  +G +P
Sbjct: 344 CKKGWTEKAFRLFLKL-VRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVP 402

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           N   Y+ LI G C  G+   A  +   M +    PN+ TY+A+IDG  K G    A ++ 
Sbjct: 403 NTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLL 462

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
            R + +G   + V YT ++   C+     QA ++  +M      P+  T+N  I   C  
Sbjct: 463 RRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQ 522

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
            +V+ + KL ++      LP   TY  ++ G  R   +  A +   ++   G + + +TY
Sbjct: 523 KKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITY 582

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
             ++ G+C    + EA QL   M+  G     +T   + Y YCKQG    A+ +L+R+  
Sbjct: 583 GALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERL-- 640

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
             E    I +  +L+  +C+   +  A ++  K+L++ +
Sbjct: 641 --EKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDL 677



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 214/427 (50%), Gaps = 7/427 (1%)

Query: 141 IVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +V S  ++G+++EA  + +   +        + N +I+       ++ A  +  EM+DR 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P+  +Y  ++   C +G +      L  M  RG   +  + T ++  +   G  + A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
             + + ++ G  PN++ +S+LI+GLC  GS+ +A  +  +M      PNV T++ALIDG 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 316 AKAGNLLGASQIWNRMI-SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
            K G    A +++ +++ S+   PNV  YTCM+   C+    ++A  L+ +M  +   PN
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
           T T+   I G C  G    A +L+D M +    PNI TYN ++DGL +  R  EA++L+ 
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
              K G+  + VTY  ++   CR     +A  +  +M   G + D  T+N++I  +C+Q 
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
           KV  + +L +   G G   P   +YTS++ G C  G +  A  +  KM + G  P+  T+
Sbjct: 524 KVEESEKLFEEAVGLGLL-PTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITY 582

Query: 555 NVLVRSL 561
             L+  L
Sbjct: 583 GALISGL 589



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 187/436 (42%), Gaps = 48/436 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            I  V   L+ M   G +        +I+++   G   +A   F +  + GL P +  ++
Sbjct: 243 RISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFS 302

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK-------- 121
            +++ L           +   M R G +PNV+T+  L+  LCK    + A++        
Sbjct: 303 SLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRS 362

Query: 122 ----------------------------LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
                                       LL+ M  +G  P+  +YT ++   CK G    
Sbjct: 363 DNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGR 422

Query: 154 AREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
           A EL        F   +  YNA+I+GLCK+ +  EA+ LL   +  G+  + +TY+ +IS
Sbjct: 423 AYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILIS 482

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C   + + +L I  +MF  G  P++H++  L+  +    +  E+  L+   +  G LP
Sbjct: 483 EFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLP 542

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
               Y+++I G C +G +  A+   ++M +  C P+  TY ALI G      L  A Q++
Sbjct: 543 TKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLY 602

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             MI NG SP  V    +    C+      A  ++E++  +       T NT I+ LC  
Sbjct: 603 ETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW---IRTVNTLIRKLCSE 659

Query: 389 GRVDWAM----KLLDQ 400
            +V  A     KLLD+
Sbjct: 660 KKVGVAALFFHKLLDK 675



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 185/396 (46%), Gaps = 2/396 (0%)

Query: 164 GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
              V   ++    +  K++EA  ++ EM + G+       + +I     +G V+ +  + 
Sbjct: 157 ATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVF 216

Query: 224 GQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSN 283
            +M  R   P+  S+  ++ GY   GR  +       MI  G+  +    + +I      
Sbjct: 217 DEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEK 276

Query: 284 GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
           G ++ A     +  +    PN+  +S+LI+G  K G++  A ++   M+  G  PNV  +
Sbjct: 277 GFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTH 336

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMA-FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           T ++  LC+     +A  L  K+   +N  PN  T+   I G C   +++ A  LL +MK
Sbjct: 337 TALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMK 396

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +   +PN  TY  L+DG  +      A+EL+  + K G   NI TYN I+ G+C+ G   
Sbjct: 397 EQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFP 456

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           EA++LL + L  G   D +T+ I+I  +C+Q     A+ +  R+   G   PD+ +Y  L
Sbjct: 457 EAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVG-LQPDMHTYNVL 515

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           +   C    ++E+    ++ +  G+ P   T+  ++
Sbjct: 516 IATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMI 551



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 153/341 (44%), Gaps = 8/341 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            +  +IN Y +     +A  +  R++E GL P    Y  ++D       F     +   M
Sbjct: 371 TYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM 430

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            ++G  PN+FTYN ++  LCK  R   AYKLL      G   D V+YT ++S  C+    
Sbjct: 431 GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDN 490

Query: 152 EEARELAMR-FGSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A  +  R F  G+      YN LI   C++ K+EE+  L  E V  G+ P   TY+++
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C  G++ +++    +M   GC P+  ++ +L+ G     +  EA  L+  MI  G 
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            P  V   TL +  C  G    A+ +  ++E+      + T + LI        +  A+ 
Sbjct: 611 SPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW---IRTVNTLIRKLCSEKKVGVAAL 667

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
            +++++    + + +          ++N F     L E+++
Sbjct: 668 FFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDLSERIS 708



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/370 (22%), Positives = 163/370 (44%), Gaps = 19/370 (5%)

Query: 196 IDPNVITYS---TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           I+PN +T+    T+++SL        SL     +           F   ++ Y++   T 
Sbjct: 95  INPNSLTHEQVITVVASLAQEAGSVVSLSFFNWVI------GFSKFRHFMRLYIVCATTF 148

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
             +D  +R               ++      G + EAV++  +M+ +         + +I
Sbjct: 149 LNNDNLDRATE--------VMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVI 200

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           D     G +  A ++++ M+     P+  +Y  MV   C+          ++ M      
Sbjct: 201 DVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYA 260

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
            +  T    I      G V+ A     +  Q    PN+  ++ L++GL ++  +K+AFE+
Sbjct: 261 VDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEM 320

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKML-IEGTKLDAITFNIIIYAYC 491
           + E+ + G + N+ T+  ++ G+C+ G   +AF+L  K++  +  K +  T+  +I  YC
Sbjct: 321 LEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYC 380

Query: 492 KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
           K+ K+N A  LL R++  G   P+  +YT L+ G C +G    A+  +  M  EG  PN 
Sbjct: 381 KEEKLNRAEMLLIRMKEQG-LVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNI 439

Query: 552 ATWNVLVRSL 561
            T+N ++  L
Sbjct: 440 FTYNAIIDGL 449



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 151/340 (44%), Gaps = 9/340 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI    ++ +++  + LL +MK +G+  +   +  +I+ + + G   +A ++   + + G
Sbjct: 375 MINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEG 434

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P +  YN I+D L  + RF     +     + G+  +  TY IL+   C+      A 
Sbjct: 435 FTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQAL 494

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR-FGSGV----SVYNALINGL 175
            +   M   G  PD  +Y  ++++ C+  +VEE+ +L     G G+      Y ++I G 
Sbjct: 495 AIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGY 554

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C++  I  A     +M D G  P+ ITY  +IS LC+   ++ +  +   M   G +P  
Sbjct: 555 CRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCE 614

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            +  +L   Y   G +  A  +  R+ ++ ++  V   +TLI  LCS   +  A    ++
Sbjct: 615 VTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTV---NTLIRKLCSEKKVGVAALFFHK 671

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           + +     +  T +A      ++      S +  R IS G
Sbjct: 672 LLDKDLNVDRITLAAFTTACYESNKFALVSDLSER-ISKG 710



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 119/272 (43%), Gaps = 36/272 (13%)

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
           CMV+   +     +A +++ +M            N  I      G VD+A K+ D+M   
Sbjct: 163 CMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR 222

Query: 405 ECLPNITTYNELLDGLLRVNRVKE-----------------------------------A 429
             +P+ T+Y  ++ G  R+ R+ +                                   A
Sbjct: 223 AVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRA 282

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           F    +  + G+  N++ ++++++G+C+ G + +AF++L +M+ +G K +  T   +I  
Sbjct: 283 FWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDG 342

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            CK+G    A +L  ++     + P++ +YT ++ G C    +  A + L +M  +G+ P
Sbjct: 343 LCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVP 402

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
           N  T+  L+       G+ G  Y L D+M  +
Sbjct: 403 NTNTYTCLIDG-HCKAGNFGRAYELMDLMGKE 433


>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
 gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
          Length = 651

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 240/524 (45%), Gaps = 27/524 (5%)

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYK 121
           KP ++ Y  ++D              +  M+   ++PNV  Y  L+ A  +   ++GA  
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 122 LLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLC 176
              EM ++G   +   + +I+S     G  E A     +F +     G  VYN+++   C
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV-------------------GNVE 217
           +   +E    LL +M + G   N+  Y+T+++   ++                   GN+ 
Sbjct: 248 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMA 307

Query: 218 TSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
            +L IL +M   G +PN   +  ++ GY  GG    A  +W  M+  G  P++V Y+ L+
Sbjct: 308 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILV 367

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCS 337
           H  C  G MD+A+ V   +E N   P + TY++++DG+ K GN+  A ++++R+ + G  
Sbjct: 368 HAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLR 427

Query: 338 PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           P VV+Y  ++  L +      A  ++ +M      P+   +    +G    G V+ A  +
Sbjct: 428 PGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGV 487

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV-C 456
             +MK+     +I  Y  LL        +  A E+  +I   G++ N +TY T+L G   
Sbjct: 488 FQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYA 547

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI--RGGGEWNP 514
           RAG V EA +L+  M  +GTK D + +N +I AY   G+  +   LL ++      +  P
Sbjct: 548 RAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKP 607

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           DI +Y +L+     +G +  A    Q +    + P+  TW  L+
Sbjct: 608 DIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALM 651



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 20/392 (5%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I PNV  Y+++I +  +  ++E ++    +M  +G   N   F S++ GY   G    A 
Sbjct: 162 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAE 221

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
             + +   E  +P  + Y++++   C  G+M+   ++  QMEE     N+  Y+ +++GF
Sbjct: 222 HWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 281

Query: 316 A-------------------KAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           A                   +AGN+  A  I   M  +G SPN + Y  ++    +   F
Sbjct: 282 AEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDF 341

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             A  + E M      P+ V +N  +   C  GR+D A+ +L+ ++    LP I TY  +
Sbjct: 342 TAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSI 401

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           LDG ++   +++A E+   I+  G++  +V+YN++L G+ +A  +  A  +L +ML  G 
Sbjct: 402 LDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGV 461

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
                 +  +   Y + G V  A  +  R++       DI++Y +LL   CNSG M  A 
Sbjct: 462 VPSERIYTALTEGYARTGDVEKAFGVFQRMKKEN-LAIDIVAYGALLKACCNSGAMHGAA 520

Query: 537 IYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
              Q++ + G+  N  T+  ++   ++  G +
Sbjct: 521 EVFQQITDAGLKHNQITYCTMLDGAYARAGRV 552



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/515 (22%), Positives = 229/515 (44%), Gaps = 63/515 (12%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I    E  +++G     ++M  +G+  +E VF S+I+ Y   G  E A           
Sbjct: 172 LIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAA----------- 220

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                    H  +   AEN                + P    YN +++A C+   ++   
Sbjct: 221 --------EHWFEKFKAEN----------------LVPGGIVYNSIVQAYCQAGNMETVE 256

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF------------------- 161
            LL +M  +G   +   YTT+++   ++   E+      R                    
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKALDILEEM 316

Query: 162 -GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
              GVS    +Y  +++G  +      AF +  +MV  G+ P+++ Y+ ++ + C  G +
Sbjct: 317 DKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRM 376

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
           + +LG+L  +      P I ++TS+L GY+ GG   +A ++++R+   G  P VV+Y++L
Sbjct: 377 DKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSL 436

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGC 336
           + GL     M+ A  +  +M  N   P+   Y+AL +G+A+ G++  A  ++ RM     
Sbjct: 437 LSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENL 496

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG-LCGCGRVDWAM 395
           + ++VAY  ++K  C +   H A  + +++       N +T+ T + G     GRV+ A 
Sbjct: 497 AIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAE 556

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG---IQLNIVTYNTIL 452
           +L+  M++    P+   YN L++      R ++   L+ ++ K      + +I TYNT++
Sbjct: 557 ELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLI 616

Query: 453 HGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
               +AG +  A +L   +       DA T+  ++
Sbjct: 617 QVYAQAGFIPRAEELFQGLARLKLVPDATTWTALM 651



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/416 (23%), Positives = 191/416 (45%), Gaps = 21/416 (5%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V +Y +LI+   +   +E A     EM+ +GI  N   + +IIS     GN E +     
Sbjct: 166 VHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFE 225

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC--- 281
           +       P    + S+++ Y   G       L  +M  EGF  N+  Y+T+++G     
Sbjct: 226 KFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIR 285

Query: 282 ----------------SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
                             G+M +A+ +  +M+++   PN   Y+ ++DG+A+ G+   A 
Sbjct: 286 DEEKCLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 345

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           ++W  M+S G  P++V Y  +V   C+     +A  ++E +      P   T+ + + G 
Sbjct: 346 KVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGY 405

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
              G +  A+++ D++K     P + +YN LL GL +  +++ A  ++ E+   G+  + 
Sbjct: 406 VKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSE 465

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
             Y  +  G  R G V +AF +  +M  E   +D + +  ++ A C  G ++ A ++  +
Sbjct: 466 RIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQ 525

Query: 506 IRGGGEWNPDIISYTSLLWGI-CNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           I   G    + I+Y ++L G    +G ++EA   +  M  +G  P+   +N L+ +
Sbjct: 526 ITDAG-LKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINA 580


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 235/460 (51%), Gaps = 6/460 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           ++IN++ R  L EQAL  F ++   GL P    +N++L  L+  N F     ++ N  + 
Sbjct: 100 AIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF-NETKG 158

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
            ++ +V+++ I++K  C+   +D  +++L +M   G +P+ V YTT++   CK G +E  
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERG 218

Query: 155 RELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           ++L  + G     +    Y  LING  K    ++   L  +M   GI PNV TY+++I  
Sbjct: 219 KQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICR 278

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C+ G +  +  +  +M  RG   N+ ++ +L+ G     R  EA  L  RM R+G  PN
Sbjct: 279 CCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPN 338

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +++Y+TLI G CS G++D+A S+  QM+ +   P++ TY+ LI GF++A N  G + +  
Sbjct: 339 LISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVR 398

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M + G SP+ V YT ++  L +++   +A  +   M       +   +   I GLC  G
Sbjct: 399 EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVG 458

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A KL   + +    PN   YN ++ G  +      A  L+ E+ + G+  N+ +YN
Sbjct: 459 DMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYN 518

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           + +  +C+     EA  LL  M+  G K     +N+I  A
Sbjct: 519 STIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 235/476 (49%), Gaps = 5/476 (1%)

Query: 94  DGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEE 153
           D    +V  +  ++ A  ++   + A     +M  +G  P + ++  ++  + K    E+
Sbjct: 89  DSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 148

Query: 154 A----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
           A     E        V  +  +I G C+   +++ F +L +M + G+ PNV+ Y+T+I  
Sbjct: 149 AWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 208

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C  G++E    +  +M       N +++T L+ G+   G   +  +L+ +M   G +PN
Sbjct: 209 CCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPN 268

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           V  Y+++I   C++G ++ A  +  +M E     NV TY+ LI G  +   +L A ++  
Sbjct: 269 VYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMC 328

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           RM  +G SPN+++Y  ++   C      +A SL  +M      P+  T+N  I G     
Sbjct: 329 RMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAK 388

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
                  ++ +M+     P+  TY  L+D L+R + +++AF++ + +EK G+  +I  Y 
Sbjct: 389 NSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYG 448

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            ++HG+C  G + EA +L   +     K + + +N +IY YCK+G    A++LL  +   
Sbjct: 449 VLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGEN 508

Query: 510 GEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
           G   P++ SY S +  +C      EA + L+ M+  G+ P+ + WN++ ++ F N+
Sbjct: 509 G-MVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDNV 563



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 187/373 (50%), Gaps = 5/373 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L QM+  G+S +  V+ ++I+   + G  E+  ++FY++ E  +      Y  +++   
Sbjct: 186 VLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFF 245

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
                     +Y  MK  G+ PNV+TYN ++   C + +++ A++L  EM  +G A + V
Sbjct: 246 KMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVV 305

Query: 137 SYTTIVSSICKLGQVEEARELAMRFG-SGVS----VYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++  +C+  +V EA  L  R    G+S     YN LI+G C    +++A  L  +M
Sbjct: 306 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 365

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
              G  P++ TY+ +I+   +  N      ++ +M  RG +P+  ++T L+   +     
Sbjct: 366 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNI 425

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            +A  +++ M + G + ++  Y  LIHGLC  G M EA  +   ++E    PN   Y+ +
Sbjct: 426 EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 485

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           I G+ K G+   A ++   M  NG  PNV +Y   +++LC++  + +A  L++ M     
Sbjct: 486 IYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGL 545

Query: 372 PPNTVTFNTFIKG 384
            P+   +N   K 
Sbjct: 546 KPSISIWNMISKA 558



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 169/349 (48%), Gaps = 5/349 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I+  + L  +M    V  ++  +  +IN + ++GL +  ++++ +++  G+ P V  YN
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++     + + +    ++  M+  G+  NV TYN L+  LC+  RV  A +L+  M   
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEA 184
           G +P+ +SY T++   C +G +++A  L  +  S      ++ YN LI G  +       
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             ++ EM  RG+ P+ +TY+ ++ +L    N+E +  I   M   G   +I+ +  L+ G
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHG 453

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
             + G   EAS L+  +      PN V Y+T+I+G C  GS   A+ +  +M EN   PN
Sbjct: 454 LCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 513

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
           V +Y++ I    K      A  +   MI  G  P++  +  + K    N
Sbjct: 514 VASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 228/453 (50%), Gaps = 40/453 (8%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI +L         + LL +MK E  + +E +F+S+  +Y RV     A+++F +++E+ 
Sbjct: 56  MISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYE 115

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNN-RVDGA 119
            +P+ K Y  +   L+ EN+  +    Y  M+  G+ P+V + N+L+KALCKN+  +D A
Sbjct: 116 CEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAA 175

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
            ++  EM N+GC P   SYT                            Y  LI GLC+  
Sbjct: 176 LRIFREMPNRGCPPH--SYT----------------------------YGTLIXGLCRLG 205

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
           KI EA  L  EM  +   P V+TY ++I  LC   ++++++ +L +M  +G  PN+ +++
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
           SL+ G+   G +  A +L + M+    LPN++ YSTL+HGLC  G + EAV +  +M+  
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV-------LCQ 352
              P+   Y  +I GF        A+   + M+  G SPN + ++  V++       LC 
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385

Query: 353 NNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITT 412
            +  ++A  L   M       +  TF++ +   C  G +  A  L+D+M    C+P+  T
Sbjct: 386 EHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXT 444

Query: 413 YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           +N ++       +V+E+ ELV ++E  G  LN+
Sbjct: 445 WNAVVCAFWDRRKVRESAELV-QVELMGTFLNL 476



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 12/407 (2%)

Query: 161 FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSL 220
           F      ++ +I+ L   +    A  LLC M +   +     + +I  +   V     ++
Sbjct: 46  FRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAV 105

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHG 279
            +  +M    C P+  S+ ++    L+G    + +  + R +RE G  P+V + + LI  
Sbjct: 106 RVFRKMKEYECEPSQKSYITVF-AILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164

Query: 280 LCSN-GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           LC N G+MD A+ +  +M    CPP+  TY  LI G  + G +  A +++  M +  CSP
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSP 224

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
            VV Y  ++  LCQ+     A  L+E+MA +   PN  T+++ + G C  G    A++LL
Sbjct: 225 TVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D M     LPN+ TY+ L+ GL +  +++EA E++  ++  G++ +   Y  I+ G C  
Sbjct: 285 DMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDI 344

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITF-------NIIIYAYCKQGKVNNAIQLLDRIRGGGE 511
               EA   L +M++ G   + +T+       NI++   C +   N A QL   +R  G 
Sbjct: 345 CKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRG- 402

Query: 512 WNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            + D  ++ SL+   CN G + +A   + +M+ +G  P+  TWN +V
Sbjct: 403 ISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVV 449



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 184/387 (47%), Gaps = 15/387 (3%)

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD---LW 258
           T+S +IS L    +   +  +L +M    CN     F S+ + Y   GR H+  D   ++
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAY---GRVHKPLDAVRVF 108

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK- 317
            +M      P+  +Y T+   L     +  A+     M E   PP+V + + LI    K 
Sbjct: 109 RKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKN 168

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
           +G +  A +I+  M + GC P+   Y  ++  LC+     +A  L ++M  + C P  VT
Sbjct: 169 SGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVT 228

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           + + I GLC    +D A++LL++M      PN+ TY+ L+DG  +      A EL+  + 
Sbjct: 229 YXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMV 288

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
                 N++TY+T++HG+C+ G + EA ++L +M ++G + DA  +  II  +C   K +
Sbjct: 289 SRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFH 348

Query: 498 NAIQLLDRIRGGG------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNF 551
            A   LD +  GG       W+  +  +  ++ G+C     +   +YL  M   GI  + 
Sbjct: 349 EAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLS-MRTRGISIDA 407

Query: 552 ATWNVLVRSLFSNLGHLGPVYILDDIM 578
            T++ LV + F N G L     L D M
Sbjct: 408 KTFDSLV-NYFCNKGDLHKAAHLVDEM 433



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 147/295 (49%), Gaps = 2/295 (0%)

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           GF  +   +S +I  L S      A  +  +M+E  C      + ++   + +    L A
Sbjct: 45  GFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDA 104

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +++ +M    C P+  +Y  +  +L   N    A      M     PP+  + N  IK 
Sbjct: 105 VRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKA 164

Query: 385 LC-GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           LC   G +D A+++  +M    C P+  TY  L+ GL R+ ++ EA EL  E+E      
Sbjct: 165 LCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSP 224

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +VTY +++HG+C++  +  A +LL +M  +G K +  T++ ++  +CK G  + A++LL
Sbjct: 225 TVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELL 284

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           D +       P++I+Y++L+ G+C  G +QEA   L +M  +G+ P+   +  ++
Sbjct: 285 DMMVSRRHL-PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKII 338



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 115/230 (50%), Gaps = 8/230 (3%)

Query: 333 SNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVD 392
           +NG   +   ++ M+  L   N F  A  L+ +M  E C    +T + F+      GRV 
Sbjct: 43  TNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKC---NITEDIFLSICRAYGRVH 99

Query: 393 W---AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
               A+++  +MK+YEC P+  +Y  +   L+  N++K A      + + GI  ++ + N
Sbjct: 100 KPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLN 159

Query: 450 TILHGVCR-AGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
            ++  +C+ +G +  A ++  +M   G    + T+  +I   C+ GK+  A +L   +  
Sbjct: 160 VLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMET 219

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
               +P +++Y SL+ G+C S  +  A   L++M ++GI PN  T++ L+
Sbjct: 220 KA-CSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLM 268


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 149/602 (24%), Positives = 282/602 (46%), Gaps = 42/602 (6%)

Query: 17   LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
            +L +M+  G+  ++ ++ ++I  Y + G  + ALK F  I   GL     I+N +L A  
Sbjct: 421  ILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFY 480

Query: 77   AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
             E   +        M R  +  N  ++N ++ + C   ++  A+ +  +M   G +P+  
Sbjct: 481  REGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVC 540

Query: 137  SYTTIVSSICKLGQVEEARELA---MRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEM 191
            +Y  ++  +C+ G + +A++     +   S V    +NAL+ G+CK   ++EA  +  +M
Sbjct: 541  TYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKM 600

Query: 192  VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            V     P++ TY+ ++S  C  G +  +L +L  M  +G  P+  ++T LL G +  G+ 
Sbjct: 601  VKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQV 660

Query: 252  HEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
              AS ++  +I +EG   + +AY++L++G    G+++    +   M +N   PN  +Y+ 
Sbjct: 661  KAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNI 720

Query: 311  LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE- 369
            L+ G+ K G    +  ++  M+  G  P+ V Y  ++  L +  +   A   +EKM  E 
Sbjct: 721  LMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEG 780

Query: 370  ----------------------------NC------PPNTVTFNTFIKGLCGCGRVDWAM 395
                                        NC       P++ TF+  I GL     +D + 
Sbjct: 781  IFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSH 840

Query: 396  KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
            ++L +M Q    PN T Y  L++   RV  +  AF L  E++  GI    V  ++I+ G+
Sbjct: 841  EVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGL 900

Query: 456  CRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
            CR G + EA  +   M+  G      TF  ++++ CK+ K+ +A+ L  R+        D
Sbjct: 901  CRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL-KRLMELCRLKVD 959

Query: 516  IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
            ++SY  L+ G+C    + +A     +M ++G+ PN  T+  L  +++S         +L+
Sbjct: 960  VVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLE 1019

Query: 576  DI 577
            DI
Sbjct: 1020 DI 1021



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 260/557 (46%), Gaps = 7/557 (1%)

Query: 11   IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
            I   ++  Q M    +S +   F  +I+SY   G   +A  ++  +  +G  P V  Y +
Sbjct: 485  ITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQN 544

Query: 71   ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            +L  L               +       +  T+N LL  +CK   +D A  +  +M    
Sbjct: 545  LLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNN 604

Query: 131  CAPDAVSYTTIVSSICKLGQVEEAR-ELAMRFGSGVS----VYNALINGLCKEHKIEEAF 185
            C PD  +YT ++S  C+ G++  A   L M    GV      Y  L+NGL  E +++ A 
Sbjct: 605  CLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 664

Query: 186  WLLCEMV-DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
            ++  E++   G+  + I Y+++++     GNV T   ++  M+     PN  S+  L+ G
Sbjct: 665  YVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHG 724

Query: 245  YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            Y+  G+  ++  L+  M+R+G  P+ V Y  LI GL   G +D AV    +M      P+
Sbjct: 725  YVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPD 784

Query: 305  VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
               +  LI  F++   +  A +++N M     SP+   ++ M+  L + N   Q+H ++ 
Sbjct: 785  KLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLH 844

Query: 365  KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            +M      PN   +   +   C  G +D A +L ++MK    +P     + ++ GL R  
Sbjct: 845  EMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCG 904

Query: 425  RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            +++EA  + + + + G+   + T+ T++H +C+   + +A  L   M +   K+D +++N
Sbjct: 905  KLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYN 964

Query: 485  IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            ++I   CK   +++A+ L   ++  G W P++ +Y +L   + ++G MQ     L+ +  
Sbjct: 965  VLITGLCKDKHISDALDLYGEMKSKGLW-PNVTTYITLTGAMYSTGRMQNGEELLEDIEE 1023

Query: 545  EGICPNFATWNVLVRSL 561
             G+ P F     L R +
Sbjct: 1024 RGLIPAFKQLENLERRM 1040



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 141/581 (24%), Positives = 259/581 (44%), Gaps = 67/581 (11%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +L+ M+ + +      +  +I+   R+  + +A  +  R+R+  L P    YN +++   
Sbjct: 211 VLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFF 270

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            E + +    ++++M R  + P+V TY  ++   C+N R+D A  +L EM   G  P  +
Sbjct: 271 GEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSEL 330

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGI 196
           +Y+                              AL+NG CK   +  A  L+ ++  RGI
Sbjct: 331 TYS------------------------------ALLNGYCKVSMLGPALDLMVDLKSRGI 360

Query: 197 DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASD 256
             N    + +I   C VG +  +  IL  M   G +P++ ++++L+ G     + HE  +
Sbjct: 361 TINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKE 420

Query: 257 LWNRMIREGFLPNVVAYSTLI---------------------HGLCSN------------ 283
           + +RM + G LPN V Y+TLI                      GL +N            
Sbjct: 421 ILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFY 480

Query: 284 --GSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G + EA      M   +   N  +++ +ID +   G ++ A  +++ M+  G SPNV 
Sbjct: 481 REGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVC 540

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  +++ LCQ     QA   +  +       +  TFN  + G+C  G +D A+ + ++M
Sbjct: 541 TYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKM 600

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            +  CLP+I TY  LL G  R  ++  A  ++  + + G+  + V Y  +L+G+   G V
Sbjct: 601 VKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQV 660

Query: 462 VEAFQLLGKMLI-EGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYT 520
             A  +  +++  EG   D I +N ++  Y K G VN   +++  +    E  P+  SY 
Sbjct: 661 KAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMY-QNEVYPNSASYN 719

Query: 521 SLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
            L+ G    G   ++    + M+ +GI P+  T+ +L+  L
Sbjct: 720 ILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGL 760



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/596 (24%), Positives = 270/596 (45%), Gaps = 44/596 (7%)

Query: 27  SCSEGVFISVINSY-RRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMIN 85
           S +  VF  +I +Y +   + + A+ +F+ + + G K +    N IL AL+ E     + 
Sbjct: 82  STNHVVFELLIKAYVKERKVLDAAVAVFF-MDDCGFKASPVACNSILKALVEEGESKYVW 140

Query: 86  PIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSI 145
                        +V T NILL +LC N     A  +L +M +  C  ++ +Y TI+   
Sbjct: 141 LFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKS-CCLSNSATYNTILHWY 199

Query: 146 CKLGQVEEAR---ELAMR--FGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
            K G+ + A    E   R    + +  YN +I+ LC+  +   AF LL  M    + P+ 
Sbjct: 200 VKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDE 259

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
            TY+T+I+     G +  +  +   M  +   P++ ++T+++ GY    R  +A  + + 
Sbjct: 260 CTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSE 319

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M   G +P+ + YS L++G C    +  A+ +   ++      N T  + LIDGF + G 
Sbjct: 320 MEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGE 379

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNT 380
           +  A QI   M+ +G  P+VV Y+ ++  +C+    H+   ++ +M      PN V + T
Sbjct: 380 ISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTT 439

Query: 381 FIKGLCGCGRVDWAMKLL-------------------------------DQMKQYECLPN 409
            I   C  G V  A+K                                 +  +QY    N
Sbjct: 440 LICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMN 499

Query: 410 IT----TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           I+    ++N ++D      ++ EAF +  ++ + G   N+ TY  +L G+C+ G +V+A 
Sbjct: 500 ISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAK 559

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           Q +  +L   + +D  TFN ++   CK G ++ A+ + +++       PDI +YT LL G
Sbjct: 560 QFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCL-PDIHTYTILLSG 618

Query: 526 ICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMANK 581
            C  G +  A + LQ ML +G+ P+   +  L+  L +        Y+  +I+  +
Sbjct: 619 FCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 674


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 212/385 (55%), Gaps = 8/385 (2%)

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSV-----YNALINGLCKEHKIEEAFWLLCEMVDRG 195
           IV ++C++G V++A E+         V     Y+ L++GLC E +I+EA  LL EM   G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             PN + ++ +IS+LC  G++  +  ++  MF++GC PN  ++ SL+ G  L G+  +A 
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L NRM+    +PN + + TL+ G   +G   + V V   +EE     N  +YS+LI G 
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G      Q+W  M+  GC PN + Y+ ++  LC+     +A   + +M  +   PN+
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            T+++ + G    G +  A+ +  +M   +C  +   Y+ L++GL +  ++KEA  +  +
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 305

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL--DAITFNIIIYAYCKQ 493
           +   GI+L++V Y++++HG C A +V +  +L  +ML    KL  D +T+NI++ A+C +
Sbjct: 306 MLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTK 365

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIIS 518
             V+ AI +L+ +   G  +PD I+
Sbjct: 366 NSVSRAIDILNTMLDQG-CDPDFIT 389



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 204/396 (51%), Gaps = 1/396 (0%)

Query: 171 LINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
           ++  LC+   +++A  +   M DR    +  TYST++  LC+ G ++ ++ +L +M V G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 231 CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAV 290
             PN  +F  L+      G    AS L + M  +G +PN V Y++L+HGLC  G +D+A+
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 291 SVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           S+  +M  N C PN  T+  L+DGF K G  L   ++   +   G   N  +Y+ ++  L
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +         L ++M  + C PNT+ ++  I GLC  G+ D A + L +MK     PN 
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY+ L+ G      + +A  +  E+       + V Y+ +++G+C+ G + EA  +  +
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 305

Query: 471 MLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIR-GGGEWNPDIISYTSLLWGICNS 529
           ML  G KLD + ++ +I+ +C    V   ++L +++     +  PD+++Y  LL   C  
Sbjct: 306 MLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTK 365

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNL 565
             +  A   L  ML++G  P+F T ++ +++L  N+
Sbjct: 366 NSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNM 401



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 191/396 (48%), Gaps = 7/396 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           + I ++ +  RVG  +QA+++F  + +         Y+ ++  L  E R      +   M
Sbjct: 2   LLIPIVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM 61

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           + +G  PN   +N+L+ ALCK   +  A KL+  M  KGC P+ V+Y ++V  +C  G++
Sbjct: 62  QVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKL 121

Query: 152 EEARELAMRFGSGVSVYN-----ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           ++A  L  R  +   V N      L++G  K  +  +   +L  + ++G   N  +YS++
Sbjct: 122 DKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSL 181

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           IS L   G  E  + +  +M  +GC PN   +++L+ G    G+  EA +    M  +G 
Sbjct: 182 ISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH 241

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN   YS+L+ G    G + +A+ V  +M +N C  +   YS LI+G  K G L  A  
Sbjct: 242 TPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALI 301

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN--CPPNTVTFNTFIKG 384
           +W +M+S G   +VVAY+ M+   C   +  Q   L  +M   N    P+ VT+N  +  
Sbjct: 302 VWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNA 361

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            C    V  A+ +L+ M    C P+  T +  L  L
Sbjct: 362 FCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 397



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 174/384 (45%), Gaps = 44/384 (11%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
            ID    LL +M+VEG                                     P    +N
Sbjct: 50  RIDEAVSLLDEMQVEGTF-----------------------------------PNPVAFN 74

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++ AL  +   S  + +  NM   G  PN  TYN L+  LC   ++D A  LL  M   
Sbjct: 75  VLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVAN 134

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF------GSGVSVYNALINGLCKEHKIEE 183
            C P+ +++ T+V    K G+  +   + +        G+  S Y++LI+GL KE K E 
Sbjct: 135 KCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFS-YSSLISGLFKEGKGEH 193

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
              L  EMV++G  PN I YS +I  LC  G  + +   L +M  +G  PN  +++SL+ 
Sbjct: 194 GMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMW 253

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY   G  H+A  +W  M       + V YS LI+GLC NG + EA+ V  QM       
Sbjct: 254 GYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKL 313

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNG--CSPNVVAYTCMVKVLCQNNMFHQAHS 361
           +V  YS++I GF  A  +    +++N+M+ +     P+VV Y  ++   C  N   +A  
Sbjct: 314 DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAID 373

Query: 362 LIEKMAFENCPPNTVTFNTFIKGL 385
           ++  M  + C P+ +T + F+K L
Sbjct: 374 ILNTMLDQGCDPDFITCDIFLKTL 397



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 161/359 (44%), Gaps = 21/359 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++  L  K ++D    LL +M       ++  F ++++ + + G A   +++   + E G
Sbjct: 111 LVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKG 170

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
            +     Y+ ++  L  E +      ++  M   G +PN   Y+ L+  LC+  + D A 
Sbjct: 171 YRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK 230

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMRFGSGVSV-YNALINGL 175
           + L+EM NKG  P++ +Y++++    + G + +A    +E+     +   V Y+ LINGL
Sbjct: 231 EYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGL 290

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG--CNP 233
           CK  K++EA  +  +M+ RGI  +V+ YS++I   C+   VE  + +  QM        P
Sbjct: 291 CKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQP 350

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
           ++ ++  LL  +        A D+ N M+ +G  P+ +     +  L  N  MD      
Sbjct: 351 DVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN--MDPPQDGR 408

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQ 352
             ++E            L+    K    +GAS I   M+     P    +   V+ LC+
Sbjct: 409 EFLDE------------LVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCK 455


>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
 gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
          Length = 808

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 273/540 (50%), Gaps = 11/540 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ ++ NSY R  +   AL +  ++    ++ ++  Y+ +L +L    +  +   I+  M
Sbjct: 150 VWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSL---RKADVALEIFKEM 206

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG-CAPDAVSYTTIVSSICKLGQ 150
           +  G+ P+ ++++IL+  LCK +++  A   L E+  +G   P  +++ T++S++C  G 
Sbjct: 207 ESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGF 266

Query: 151 VEEARE---LAMRFGSGVS--VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
           +++A+    L +++G   S   Y+ +I+GLCK   + EAF +   + + G++ +++T ++
Sbjct: 267 IQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNS 326

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           +I+     G+      ++  M   G  P+I ++T L+ G+  GG   E   +   ++ +G
Sbjct: 327 LINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQG 386

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              N+V YS LI+ L   G   E  ++  ++       +V  YS LI G++K G +  A 
Sbjct: 387 MELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRAL 446

Query: 326 QIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           Q+WN M S+   +P  V +  ++  LC+     +A S +E +A +  P + V +N  I G
Sbjct: 447 QVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDG 506

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
               G +  A++L D +      P I T N LL G  +   +  A    T I+   +   
Sbjct: 507 YAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPT 566

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLD 504
            VTY T++  +  AG V     L  +M  +G K +A+T++++I   CKQ   ++A  +LD
Sbjct: 567 TVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLD 626

Query: 505 RIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSN 564
            +   G ++ D I Y +L+ G C +   + AF   + M+  G+ P   T+N+LV  L S 
Sbjct: 627 DMCIEG-FDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSK 685



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/563 (23%), Positives = 255/563 (45%), Gaps = 33/563 (5%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           +I+ L ++ +I      LQ+++ EG     G+ F +++++    G  + A  +F  + ++
Sbjct: 221 LIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVFCLMLKY 280

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           GL P+   Y+ I+  L      S    I+ ++  +GME ++ T N L+     +      
Sbjct: 281 GLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHGHTREI 340

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEH 179
            K++  M   G  PD V+YT +++  C+ G VEE  ++                      
Sbjct: 341 PKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRK-------------------- 380

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
                     +++ +G++ N++TYS +I++L   G       +LG++   G   ++ +++
Sbjct: 381 ----------DILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYS 430

Query: 240 SLLKGYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE 298
            L+ GY   G    A  +WN M   +   P  V + +++ GLC  G +DEA S    +  
Sbjct: 431 ILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIAS 490

Query: 299 NSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
              P +V  Y+ +IDG+AK G++  A Q+++ +I  G  P +V    ++   C+    H 
Sbjct: 491 KYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHM 550

Query: 359 AHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD 418
           A S    +   +  P TVT+ T +  L   G+V   + L  +M      PN  TY+ ++ 
Sbjct: 551 AESYFTAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIK 610

Query: 419 GLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKL 478
           GL +     +A  ++ ++   G   + + YNT++ G C       AF +   M+  G   
Sbjct: 611 GLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMP 670

Query: 479 DAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIY 538
             +T+N+++   C +G V +A   L+  R  G       +Y +L+   C  G   +A ++
Sbjct: 671 TPVTYNLLVNVLCSKGLVIHAEMQLESFRKQGA-KLRKFAYITLIKAQCAKGMPYKAIMW 729

Query: 539 LQKMLNEGICPNFATWNVLVRSL 561
             K+L+ G   +   ++  +  L
Sbjct: 730 FGKLLDAGFEASIEDFSAAINRL 752



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/499 (23%), Positives = 228/499 (45%), Gaps = 48/499 (9%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           + S M    M+ ++ TY+ LL +L    + D A ++  EM + G  P   S++       
Sbjct: 170 VLSKMSSLNMQISITTYDSLLYSL---RKADVALEIFKEMESCGIPPSDYSHSI------ 220

Query: 147 KLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYST 205
                                   LI+GLCK+ KI EA   L E+   G   P  +T++T
Sbjct: 221 ------------------------LIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNT 256

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++S+LC+ G ++ +  +   M   G NP+ H++++++ G    G   EA +++  +  EG
Sbjct: 257 LMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEG 316

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              ++V  ++LI+G   +G   E   +   M      P++ TY+ LI G  + G++    
Sbjct: 317 MELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGM 376

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
           +I   ++  G   N+V Y+ ++  L +  +F++  +L+ ++       + + ++  I G 
Sbjct: 377 KIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGY 436

Query: 386 CGCGRVDWAMKLLDQM-KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
              G +  A+++ + M       P    +  +L GL +   + EA   +  I       +
Sbjct: 437 SKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSD 496

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN------N 498
           +V YN ++ G  + G +  A QL   +++ G     +T N ++Y YCK G ++       
Sbjct: 497 VVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFT 556

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           AIQL D +       P  ++YT+L+  +  +G +       ++M  +GI PN  T++V++
Sbjct: 557 AIQLSDLL-------PTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVI 609

Query: 559 RSLFSNLGHLGPVYILDDI 577
           + L           +LDD+
Sbjct: 610 KGLCKQFMFHDAKNVLDDM 628



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 196/398 (49%), Gaps = 10/398 (2%)

Query: 188 LCEMVDRGI---DPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           LC+++  G    D N I +  + +S         +L +L +M       +I ++ SLL  
Sbjct: 133 LCDILWSGFKEWDSNSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLL-- 190

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSCPP 303
           Y L  +   A +++  M   G  P+  ++S LI GLC    + EA+S   ++ +E    P
Sbjct: 191 YSLR-KADVALEIFKEMESCGIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIP 249

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
              T++ L+      G +  A  ++  M+  G +P+   Y+ ++  LC+     +A ++ 
Sbjct: 250 LGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIF 309

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
           + +  E    + VT N+ I G    G      K+++ M+     P+I TY  L+ G    
Sbjct: 310 QSVTEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEG 369

Query: 424 NRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
             V+E  ++  +I   G++LNIVTY+ +++ + + G+  E   LLG++   G +LD I +
Sbjct: 370 GDVEEGMKIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAY 429

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
           +I+I+ Y K G++  A+Q+ + +       P  +++ S+L G+C  G + EA  YL+ + 
Sbjct: 430 SILIHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARSYLETIA 489

Query: 544 NEGICPNFATWNVLVRSLFSNLGHLGPVYILDD--IMA 579
           ++    +   +NV++   ++ +G +G    L D  IMA
Sbjct: 490 SKYQPSDVVLYNVVIDG-YAKVGDIGNAVQLYDAIIMA 526



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/451 (21%), Positives = 186/451 (41%), Gaps = 41/451 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +++ M+  GV      +  +I  +   G  E+ +K+   I   G++  +  Y+ +++AL 
Sbjct: 343 MIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYSVLINALF 402

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDA 135
            +  F  +  +   +   G+E +V  Y+IL+    K   +  A ++   M  ++   P +
Sbjct: 403 KKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSSQRVTPTS 462

Query: 136 VSYTTIVSSICKLGQVEEARE----LAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCE 190
           V++ +I+  +CK G ++EAR     +A ++  S V +YN +I+G  K   I  A  L   
Sbjct: 463 VNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDA 522

Query: 191 MVDRGIDPNVIT-----------------------------------YSTIISSLCDVGN 215
           ++  G+ P ++T                                   Y+T++ +L + G 
Sbjct: 523 IIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTYTTLMDALSEAGK 582

Query: 216 VETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYST 275
           V + L +  +M  +G  PN  +++ ++KG       H+A ++ + M  EGF  + + Y+T
Sbjct: 583 VHSMLSLFKEMTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNT 642

Query: 276 LIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           LI G C       A  V   M      P   TY+ L++     G ++ A          G
Sbjct: 643 LIQGFCETQDAKNAFGVYELMVFRGVMPTPVTYNLLVNVLCSKGLVIHAEMQLESFRKQG 702

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
                 AY  ++K  C   M ++A     K+       +   F+  I  LC       A+
Sbjct: 703 AKLRKFAYITLIKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEAL 762

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRV 426
            L+  M      P++  Y  L   + + N +
Sbjct: 763 MLVPIMLSVGVYPDVELYRVLGTAVQKKNEL 793


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 232/468 (49%), Gaps = 12/468 (2%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            + M+ +G    E   +  + + RR G  +  L+ F R+    ++ TV     +LD L  
Sbjct: 182 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 241

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                M   +   +   G++ NV TYN  ++   K   + G  ++L  M  +G A + V+
Sbjct: 242 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 301

Query: 138 YTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           YT ++     +G++EEA+ L   MR     + V VY ++I+  C+   ++ A  L  EM 
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           D+G+ P+  TY  +I  +C  G +E +  ++ +M  +G + N   F +L+ GY   G   
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA  L   M ++G   +V AY+++  GLC     DEA  + + M E    PN  +++ LI
Sbjct: 422 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 481

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           D + K GN + A +++  M   G  PN++ Y  ++    +     +AH L +++      
Sbjct: 482 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 541

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+  T  + I G C  G+VD A+KL D+M Q   +PN+ TY  ++ GL +  R +EAF+L
Sbjct: 542 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
             E+++ G+  +   Y++++  +  A   +        M I+G+++ A
Sbjct: 602 YDEMKETGLTPDDTVYSSLVGSLHSADESIS-------MQIQGSQVKA 642



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 212/444 (47%), Gaps = 6/444 (1%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           + +M++ G   +  +  + L AL +  +VD   +    M N        S T ++  +CK
Sbjct: 182 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 241

Query: 148 LGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
            G VE  R+L     A    + V  YNA I G  K   +     +L  M   G+  NV+T
Sbjct: 242 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 301

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+ +I    ++G +E +  +  +M  +G   +++ +TS++      G    A  L++ M 
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
            +G +P+   Y  LIHG+C  G M+ A  +  +M+      N   ++ LIDG+ ++G + 
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A ++   M   G   +V AY  +   LC+ N   +A  L+  M      PNT++F T I
Sbjct: 422 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 481

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
              C  G    A ++  +M++   +PNI TYN L+DG  +   +KEA +L  E+E  G+ 
Sbjct: 482 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 541

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            ++ T  +++HG C  G V  A +L  +M   G   + +T+  +I    K G+   A +L
Sbjct: 542 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 601

Query: 503 LDRIRGGGEWNPDIISYTSLLWGI 526
            D ++  G   PD   Y+SL+  +
Sbjct: 602 YDEMKETG-LTPDDTVYSSLVGSL 624



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 188/355 (52%), Gaps = 5/355 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            IE   ++ ++ GV  +L  M+ EGV+C+   +  +I+ +  +G  E+A ++F  +RE G
Sbjct: 270 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++  V +Y  I+              ++  M   G+ P+  TY  L+  +CK  +++ A 
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGL 175
            L+ EM  KG   + V + T++   C+ G V+EA  L +        S V  YN++ +GL
Sbjct: 390 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK ++ +EA  LL  MV+RG+ PN ++++T+I   C  GN   +  +  +M  +G  PNI
Sbjct: 450 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 509

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ GY   G   EA  L + +   G +P+V   ++LIHG C +G +D A+ +  +
Sbjct: 510 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 569

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVL 350
           M +    PNV TY+A+I G +K G    A ++++ M   G +P+   Y+ +V  L
Sbjct: 570 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 248/559 (44%), Gaps = 45/559 (8%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHIL---------DALLAENRFSMINPIYS-NMKRDG 95
           AE  L  F+ IR+   KP ++ Y  ++         D L    +F+ I  +++     DG
Sbjct: 72  AESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDG 131

Query: 96  MEPNVFT-----------------------YNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           +   V                         +++L +    N     A +    M  KG  
Sbjct: 132 LRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFH 191

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVYNALI--NGLCKEHKIEEAFWL 187
            D  S    + ++ + GQV+       R       V+VY+  I  +GLCK   +E    L
Sbjct: 192 IDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKL 251

Query: 188 LCEMVDRGIDPNVITYSTIIS---SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           + E+  +G+  NV+TY+  I       D+G V     IL  M   G   N+ ++T L+ G
Sbjct: 252 MDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE---ILTLMEKEGVACNVVTYTLLIHG 308

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G+  EA  L+  M  +G   +V  Y+++I   C +G++  A+ +  +M +    P+
Sbjct: 309 FSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPS 368

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY ALI G  KAG +  A  + N M   G   N V +  ++   C++ M  +A  L  
Sbjct: 369 AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQV 428

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  +    +   +N+   GLC   R D A  LL  M +    PN  ++  L+D   +  
Sbjct: 429 VMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 488

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
              EA  +  E+E+ G   NI+TYN ++ G  + G + EA +L  ++   G   D  T  
Sbjct: 489 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 548

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I+  C  GKV+ A++L D +   G   P++++YT+++ G+   G  +EAF    +M  
Sbjct: 549 SLIHGECIDGKVDMALKLFDEMPQRG-LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKE 607

Query: 545 EGICPNFATWNVLVRSLFS 563
            G+ P+   ++ LV SL S
Sbjct: 608 TGLTPDDTVYSSLVGSLHS 626



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 164/314 (52%), Gaps = 5/314 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           +I+  Q L ++M+ +G+     V+ S+I+   R G  ++AL +F  + + GL P+   Y 
Sbjct: 314 KIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 373

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            ++  +    +      + + M+  G++ N   +N L+   C++  VD A +L V M  K
Sbjct: 374 ALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKK 433

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEA 184
           G   D  +Y +I S +CKL + +EA+ L       GVS     +  LI+  CKE    EA
Sbjct: 434 GLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEA 493

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             +  EM ++G  PN+ITY+ +I      GN++ +  +  ++  RG  P++++ TSL+ G
Sbjct: 494 KRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHG 553

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
             + G+   A  L++ M + G +PNVV Y+ +I GL  +G  +EA  +  +M+E    P+
Sbjct: 554 ECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 613

Query: 305 VTTYSALIDGFAKA 318
            T YS+L+     A
Sbjct: 614 DTVYSSLVGSLHSA 627


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/525 (27%), Positives = 254/525 (48%), Gaps = 46/525 (8%)

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+ P+V T+  +L  LCK+ ++     LL EMG  G   + VSYT ++ ++ K G+V EA
Sbjct: 5   GIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEA 64

Query: 155 -RELAMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
              LA     G    V     LI+GL K  +I+EA +L C +    + PN ITYS +I S
Sbjct: 65  LMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDS 124

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C +G++  +   L +M  + C PN+ +++SL+ GY+  G  H+A  +  +M+ +  +PN
Sbjct: 125 RCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPN 184

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           +  Y+ L+ G    G  D A+ +  +M++     NV    A ++   ++G +  A ++  
Sbjct: 185 ICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVA 244

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
           +M S G  P++V YT ++    ++     A +L ++M  +N   + VTFN  I  L   G
Sbjct: 245 KMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLG 304

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
           + D    +   M++    P++ TYN +L+G  +      A EL  E++   +  N +T N
Sbjct: 305 KSDTE-SIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCN 363

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEG---------------------------------- 475
            +++G+C AG +  A  +L +M++ G                                  
Sbjct: 364 IMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNM 423

Query: 476 -TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             K+D   +NI+I   CK G    A  +L  +   G    D  +Y +L+ G C S  ++ 
Sbjct: 424 QLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGII-ADTTTYNALIHGYCISSHLKR 482

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMA 579
           AF+    ML+E + P+  T+N+L+      L   G ++  DD+++
Sbjct: 483 AFMTYSTMLSERVSPDIETYNLLL----GGLSKAGLIHEADDLLS 523



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 246/533 (46%), Gaps = 7/533 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  +I   +YL   +    +  +   + ++I+S  ++G    A    + + E  
Sbjct: 86  LIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKD 145

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  Y+ +++  + +        +   M      PN+ TY ILL    K    D A 
Sbjct: 146 CVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIAL 205

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGL 175
            L  +M   G   +       V+++ + G++EEA EL  +  SG     +  Y  L++G 
Sbjct: 206 DLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGF 265

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
            K  K+  A  L  EM  + +  +++T++ +I+ L  +G  +T   I   M   G +P++
Sbjct: 266 LKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGKSDTE-SIYSAMREMGLSPDL 324

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ ++L G    G    A +LWN M     +PN +  + +I+GLC  G M+ A+ +  +
Sbjct: 325 ATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKE 384

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P  TTY  L++  +K+       Q    +++     +   Y  ++  LC+  M
Sbjct: 385 MVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGM 444

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
             +A ++++ M       +T T+N  I G C    +  A      M      P+I TYN 
Sbjct: 445 TRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNL 504

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG 475
           LL GL +   + EA +L++EI+K G+  N  TY T++ G C+     E  ++  +M+I+G
Sbjct: 505 LLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKG 564

Query: 476 TKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICN 528
                  +N++I  + K GK+  A +L++ ++  G  +P   +Y  L+ G CN
Sbjct: 565 FIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKG-VSPTCTTYDILICGWCN 616



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 233/504 (46%), Gaps = 23/504 (4%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y  +LDAL    + +      + M   G   +V    +L+  L K+ ++  A  L   + 
Sbjct: 48  YTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLY 107

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIE 182
                P+ ++Y+ ++ S CKLG +  A               V  Y++LING  K+  + 
Sbjct: 108 QLNLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLH 167

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           +AF +L +MV +   PN+ TY+ ++      G  + +L +  +M   G   N+    + +
Sbjct: 168 DAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFV 227

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                 GR  EA +L  +M   G  P++V Y+ L+ G   +G +  A++++ +M   +  
Sbjct: 228 NNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 287

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            ++ T++ LI+   K G       I++ M   G SP++  Y  M+    +   +  A  L
Sbjct: 288 FDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALEL 346

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD---G 419
             +M      PN +T N  I GLC  GR++ A+ +L +M      P  TTY  LL+    
Sbjct: 347 WNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSK 406

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
             R + + +  EL+  ++   ++++   YN ++  +C+ GM  +A  +L  M   G   D
Sbjct: 407 SRRADTILQTHELLVNMQ---LKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIAD 463

Query: 480 AITFNIIIYAYC-----KQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
             T+N +I+ YC     K+  +  +  L +R+      +PDI +Y  LL G+  +G + E
Sbjct: 464 TTTYNALIHGYCISSHLKRAFMTYSTMLSERV------SPDIETYNLLLGGLSKAGLIHE 517

Query: 535 AFIYLQKMLNEGICPNFATWNVLV 558
           A   L ++   G+ PN  T+  L+
Sbjct: 518 ADDLLSEIKKRGLVPNACTYETLM 541



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 181/371 (48%), Gaps = 2/371 (0%)

Query: 191 MVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGR 250
           MV  GI P+V+T+ +I+  LC  G +     +L +M   G N N  S+T LL      G+
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
             EA      MI  G   +V+A + LI GL  +G + EA  +   + + +  PN  TYSA
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LID   K G++ GA    + M    C PNV+ Y+ ++    +  + H A  ++ KM  +N
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
             PN  T+   + G    G  D A+ L  +MKQ     N+   +  ++ + R  R++EA 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           ELV ++   G++ ++V Y  ++ G  ++G V  A  L  +M  +    D +TFN++I   
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 491 CKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPN 550
            K GK +    +   +R  G  +PD+ +Y ++L G    G    A     +M +  + PN
Sbjct: 301 FKLGKSDTE-SIYSAMREMG-LSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPN 358

Query: 551 FATWNVLVRSL 561
             T N+++  L
Sbjct: 359 AITCNIMINGL 369



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 80/210 (38%), Gaps = 20/210 (9%)

Query: 21  MKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENR 80
           M  E VS     +  ++    + GL  +A  +   I++ GL P    Y  ++        
Sbjct: 490 MLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCGHCKVRN 549

Query: 81  FSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTT 140
                 IY  M   G  P    YN+L+    K  ++  A +L+ EM  KG +P   +Y  
Sbjct: 550 TKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPTCTTYDI 609

Query: 141 IVSSICKLGQVEEARELAMRFGSGVSV-YNALINGLCKEHKIEEAFWLLCEMVDRGIDPN 199
           ++   C L ++ +        GS + + Y A            EA  L  EM DRG  P 
Sbjct: 610 LICGWCNLLKMPD-------LGSTLKISYRA------------EAKRLFIEMNDRGFVPC 650

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVR 229
             T + I S+    G    +  +L   + R
Sbjct: 651 ESTQACISSTFAAPGKKADARMLLKSTYKR 680


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 221/425 (52%), Gaps = 6/425 (1%)

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELA-----MRFGSGV 165
           C    ++ A      M +K   P  V +  ++S++ ++        L+     +R    V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 166 SVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQ 225
             +N LIN   +  +++ AF +L +++  G +P+ +T+S++I+ LC       ++    +
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 226 MFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGS 285
           M   G  PN+H++ +++KG+   G+T  A  L  +M + G  P++V Y+T+I GLC +  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 286 MDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTC 345
           + EA+ +  +++     P+V TYS L+ G   +     AS ++N M+S    P+VV +  
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 346 MVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
           +V  LC+  M  +A  +I+ M  +   PN  T+N+ + G C   +V  A  + D M    
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C+PN+ +YN L++G  +  R+ EA EL  E+   G+  N   YNT++ G+C+AG   EA 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWG 525
           +L   M  +G   D +T  I++ + CK G ++NA++L  R        P++++Y  L+  
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLF-RAMQDSCLKPNLVTYDILIRA 478

Query: 526 ICNSG 530
           +  SG
Sbjct: 479 MYKSG 483



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 211/434 (48%), Gaps = 30/434 (6%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKL 122
           P +  ++ +L AL+    +  +  +   ++   +E +VF +NIL+    +  RVD A+ +
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 123 LVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIE 182
           L ++   G  PDAV++++                              LINGLC E K  
Sbjct: 142 LGKIIKLGFEPDAVTFSS------------------------------LINGLCFEDKFA 171

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            A     EMV  G  PN+ TY+TII   C +G    ++G+L +M   G  P+I  + +++
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTII 231

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
            G        EA D+++ +  +G  P+V  YS L+HGLC++   +EA ++  +M   +  
Sbjct: 232 DGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIM 291

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           P+V T++ L+D   K G L  A  I   MI  G  PN   Y  ++   C  N   +A  +
Sbjct: 292 PDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMV 351

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLR 422
            + M  + C PN V++N  I G C   R+D A +L D+M     +PN   YN L+ GL +
Sbjct: 352 FDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ 411

Query: 423 VNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAIT 482
             R  EA EL  +++  G   ++VT   +L  +C+ G +  A +L   M     K + +T
Sbjct: 412 AGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVT 471

Query: 483 FNIIIYAYCKQGKV 496
           ++I+I A  K GK+
Sbjct: 472 YDILIRAMYKSGKI 485



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 187/361 (51%), Gaps = 5/361 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           +IN + R+   + A  +  +I + G +P    ++ +++ L  E++F+     +  M   G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
            +PN+ TYN ++K  CK  +   A  LL +M   G  PD V Y TI+  +CK   V EA 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 156 ELAMRF-GSGVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
           ++     G GV      Y+ L++GLC   + EEA  L  EM+   I P+V+T++ ++  L
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C  G +  + GI+  M  +G  PN  ++ SL+ GY L  +  EA  +++ MI +G +PNV
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           V+Y+ LI+G C    +DEA  +  +M      PN   Y+ LI G  +AG    A +++  
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           M + GCSP++V  T ++  LC+      A  L   M      PN VT++  I+ +   G+
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484

Query: 391 V 391
           +
Sbjct: 485 I 485



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 193/377 (51%), Gaps = 5/377 (1%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           I+ +V  ++ +I+    +  V+ +  +LG++   G  P+  +F+SL+ G     +   A 
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           + ++ M+  G+ PN+  Y+T+I G C  G    AV +  +M++    P++  Y+ +IDG 
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K   +  A  I++ +   G  P+V  Y+ ++  LC ++   +A +L  +M   N  P+ 
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
           VTFN  +  LC  G +  A  ++  M +    PN  TYN L++G    N+V EA  +   
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDA 354

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGK 495
           +   G   N+V+YN +++G C+A  + EA +L  +M   G   +   +N +I   C+ G+
Sbjct: 355 MITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGR 414

Query: 496 VNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWN 555
              A +L   ++  G  +PD+++ T LL  +C  G +  A    + M +  + PN  T++
Sbjct: 415 HCEARELFKDMQAQG-CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYD 473

Query: 556 VLVRSLFSNLGHLGPVY 572
           +L+R+++ +    G +Y
Sbjct: 474 ILIRAMYKS----GKIY 486



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 190/400 (47%), Gaps = 7/400 (1%)

Query: 33  FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMK 92
           F  ++++  R+      L +  RI    ++  V  +N +++      R      +   + 
Sbjct: 87  FDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKII 146

Query: 93  RDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE 152
           + G EP+  T++ L+  LC  ++   A +   EM   G  P+  +Y TI+   CK+G+  
Sbjct: 147 KLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTT 206

Query: 153 EARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTII 207
            A  L  +         + +YN +I+GLCK+  + EA  +  E+  +G+ P+V TYS ++
Sbjct: 207 VAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILM 266

Query: 208 SSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL 267
             LC+    E +  +  +M      P++ +F  L+      G   EA  +   MI +G  
Sbjct: 267 HGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVE 326

Query: 268 PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQI 327
           PN   Y++L++G C    + EA  V   M    C PNV +Y+ LI+G+ KA  +  A ++
Sbjct: 327 PNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAREL 386

Query: 328 WNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCG 387
           ++ M   G  PN   Y  ++  LCQ     +A  L + M  + C P+ VT    +  LC 
Sbjct: 387 FDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCK 446

Query: 388 CGRVDWAMKLLDQMKQYECL-PNITTYNELLDGLLRVNRV 426
            G +D A++L   M Q  CL PN+ TY+ L+  + +  ++
Sbjct: 447 LGYLDNALRLFRAM-QDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 161/324 (49%), Gaps = 5/324 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
            F S+IN         +A++ F  +   G +P +  YN I+       + ++   +   M
Sbjct: 156 TFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM 215

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
            + G  P++  YN ++  LCK+  V  A  +  E+  KG  PD  +Y+ ++  +C   Q 
Sbjct: 216 DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQK 275

Query: 152 EEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           EEA  L     ++     V  +N L++ LCKE  + EA  ++  M+++G++PN  TY+++
Sbjct: 276 EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSL 335

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++  C    V  +  +   M  +GC PN+ S+  L+ GY    R  EA +L++ M   G 
Sbjct: 336 MNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
           +PN   Y+TLI GLC  G   EA  +   M+   C P++ T + L+D   K G L  A +
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALR 455

Query: 327 IWNRMISNGCSPNVVAYTCMVKVL 350
           ++  M  +   PN+V Y  +++ +
Sbjct: 456 LFRAMQDSCLKPNLVTYDILIRAM 479



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 165/310 (53%), Gaps = 5/310 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
              +M   G   +   + ++I  + ++G    A+ +  ++ + G +P + IYN I+D L 
Sbjct: 176 FFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLC 235

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   S    I+S +K  G+ P+VFTY+IL+  LC +++ + A  L  EM +    PD V
Sbjct: 236 KDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 137 SYTTIVSSICKLGQVEEARE-LAMRFGSGV----SVYNALINGLCKEHKIEEAFWLLCEM 191
           ++  +V  +CK G + EA+  + +    GV    + YN+L+NG C ++K+ EA  +   M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + +G  PNV++Y+ +I+  C    ++ +  +  +M  RG  PN  ++ +L+ G    GR 
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +L+  M  +G  P++V  + L+  LC  G +D A+ +   M+++   PN+ TY  L
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 312 IDGFAKAGNL 321
           I    K+G +
Sbjct: 476 IRAMYKSGKI 485



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 164/357 (45%), Gaps = 34/357 (9%)

Query: 258 WNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK 317
           +N MI +  LP +V +  L+  L         +S+S ++E      +V  ++ LI+ F++
Sbjct: 72  FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131

Query: 318 AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVT 377
              +  A  +  ++I  G  P+ V ++ ++  LC  + F +A    ++M      PN  T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191

Query: 378 FNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE 437
           +NT IKG C  G+   A+ LL +M +    P+I  YN ++DGL +   V EA ++ +EI+
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251

Query: 438 KCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVN 497
             G++ ++ TY+ ++HG+C +    EA  L  +M+      D +TFNI++   CK+G ++
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS 311

Query: 498 NAIQLLD-RIRGGGEWN---------------------------------PDIISYTSLL 523
            A  ++   I  G E N                                 P+++SY  L+
Sbjct: 312 EAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILI 371

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            G C +  + EA     +M   G+ PN   +N L+  L     H     +  D+ A 
Sbjct: 372 NGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQ 428



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 5/186 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++KL ++  +   Q +++ M  +GV  +   + S++N Y       +A  +F  +   G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P V  YN +++      R      ++  M   G+ PN F YN L+  LC+  R   A 
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAR 419

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGL 175
           +L  +M  +GC+PD V+ T ++ S+CKLG ++ A  L  AM+       +  Y+ LI  +
Sbjct: 420 ELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479

Query: 176 CKEHKI 181
            K  KI
Sbjct: 480 YKSGKI 485


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 241/469 (51%), Gaps = 8/469 (1%)

Query: 30  EGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYS 89
           E V+  ++N Y +  + + ALK+  ++R   + P + + N +L ALL   + ++      
Sbjct: 151 ETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLK 210

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
            MK  G+  N    ++ +   C    +D  +KLL+EM   G  PD V+YT ++ S+CK+ 
Sbjct: 211 EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMS 270

Query: 150 QVEEARELAMRFGS-GVSV----YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
            ++EA  +  +    GV +     +++++G CK  K EEA  +L E+ +  + PN+  ++
Sbjct: 271 LLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVL-EVFN--LSPNIFVFN 327

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           + IS LC  GN+  +  +   M   G  P+  S+T+++ GY        A     +M++ 
Sbjct: 328 SFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKR 387

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G  P+V  Y+ LI   C  G+M+ A  +  +M      P+V +Y+ L++G+ K G+L  A
Sbjct: 388 GIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKA 447

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            ++ + M S G SP++V Y  ++  L +  + ++A  +++++      P+ VTF   I G
Sbjct: 448 FELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGG 507

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLN 444
               G  + A  L   M ++   P++ T + LL+G  R   + EA  L  ++   G++ +
Sbjct: 508 FSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKAD 567

Query: 445 IVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           ++ YN+++HG C  G + +A  L+  M+  G   + IT + ++  Y K+
Sbjct: 568 VILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKK 616



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 240/509 (47%), Gaps = 36/509 (7%)

Query: 52  MFYRIREFGLKPTV--KIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
           +F +I E   K  V   +Y  +++  + EN   +   +   M+   + P +   N LLKA
Sbjct: 136 IFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKA 195

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYN 169
           L ++ +++ A+  L EM ++G                               G   S+ +
Sbjct: 196 LLESEQLNLAWDFLKEMKSQG------------------------------LGLNASIIS 225

Query: 170 ALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVR 229
             I+G C +  I+  + LL EM   GI P+V+ Y+ +I SLC +  ++ +  IL +M   
Sbjct: 226 LFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQM 285

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEA 289
           G   +  S +S++ GY   G++ EA D+          PN+  +++ I  LC++G+M +A
Sbjct: 286 GVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKLCTDGNMLKA 342

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
             V   M E    P+  +Y+ ++ G+ K  ++  A +   +M+  G  P+V  YT ++  
Sbjct: 343 AKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDS 402

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
            C+      A  L ++M  E   P+ V++NT + G    G +  A +LL  M+     P+
Sbjct: 403 CCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPD 462

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           + TYN L+ GL++   V EA +++ E+ + G   ++VT+  I+ G    G   EAF L  
Sbjct: 463 LVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFF 522

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
            M     + D +T + ++  YC+   +  A  L  ++   G    D+I Y SL+ G C+ 
Sbjct: 523 YMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAG-LKADVILYNSLIHGFCSL 581

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G + +A   +  M+  GI PN  T + LV
Sbjct: 582 GNIDDACHLVSMMIEHGIMPNNITHHALV 610



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 207/422 (49%), Gaps = 11/422 (2%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           + V N+L+  L +  ++  A+  L EM  +G+  N    S  IS  C  GN++T   +L 
Sbjct: 186 IGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLM 245

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M   G  P++ ++T ++          EA+ +  +M + G   + V+ S+++ G C  G
Sbjct: 246 EMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVG 305

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYT 344
             +EA+ V   +E  +  PN+  +++ I      GN+L A++++  M   G  P+  +YT
Sbjct: 306 KSEEAMDV---LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYT 362

Query: 345 CMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY 404
            M+   C+      A   + KM      P+  T+   I   C  G ++ A  L  +M   
Sbjct: 363 TMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITE 422

Query: 405 ECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
             +P++ +YN L++G  +   +++AFEL++ +   G+  ++VTYN ++HG+ + G+V EA
Sbjct: 423 GLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEA 482

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
             +L ++   G   D +TF  II  +  +G    A  LL          PD+++ ++LL 
Sbjct: 483 KDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAF-LLFFYMSEHHLEPDVVTCSALLN 541

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG------HLGPVYILDDIM 578
           G C +  M EA +   KML+ G+  +   +N L+   F +LG      HL  + I   IM
Sbjct: 542 GYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHG-FCSLGNIDDACHLVSMMIEHGIM 600

Query: 579 AN 580
            N
Sbjct: 601 PN 602



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 210/478 (43%), Gaps = 66/478 (13%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L E  +++     L++MK +G+  +  +    I+ Y   G  +   K+   ++  G
Sbjct: 192 LLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLG 251

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG------------------------- 95
           +KP V  Y  ++D+L   +       I   M + G                         
Sbjct: 252 IKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAM 311

Query: 96  -------MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKL 148
                  + PN+F +N  +  LC +  +  A K+  +M   G  PD  SYTT+++     
Sbjct: 312 DVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMA----- 366

Query: 149 GQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIIS 208
                                    G CK   I  A   L +M+ RGI P+V TY+ +I 
Sbjct: 367 -------------------------GYCKVKDISNALKYLGKMLKRGIRPSVATYTLLID 401

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
           S C  GN+E +  +  +M   G  P++ S+ +L+ GY   G   +A +L + M   G  P
Sbjct: 402 SCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSP 461

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW 328
           ++V Y+ LIHGL   G ++EA  +  ++      P+V T++ +I GF+  GN   A  ++
Sbjct: 462 DLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLF 521

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M  +   P+VV  + ++   C+     +A+ L  KM       + + +N+ I G C  
Sbjct: 522 FYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSL 581

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV---NRV-KEAFELVTEIEKCGIQ 442
           G +D A  L+  M ++  +PN  T++ L+ G  +    N V + AF+L   + K GIQ
Sbjct: 582 GNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLLLKYGIQ 639



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 156/321 (48%), Gaps = 4/321 (1%)

Query: 241 LLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS 300
           L+  Y+    T  A  L  +M      P +   ++L+  L  +  ++ A     +M+   
Sbjct: 157 LVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQG 216

Query: 301 CPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH 360
              N +  S  I G+   GN+    ++   M   G  P+VVAYT ++  LC+ ++  +A 
Sbjct: 217 LGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEAT 276

Query: 361 SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGL 420
           S++ KM       ++V+ ++ + G C  G+ + AM   D ++ +   PNI  +N  +  L
Sbjct: 277 SILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAM---DVLEVFNLSPNIFVFNSFISKL 333

Query: 421 LRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDA 480
                + +A ++  ++ + G+  +  +Y T++ G C+   +  A + LGKML  G +   
Sbjct: 334 CTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSV 393

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+ ++I + CK G +  A  L  R+   G   PD++SY +L+ G    G +Q+AF  L 
Sbjct: 394 ATYTLLIDSCCKPGNMEMAEYLFQRMITEG-LVPDVVSYNTLMNGYGKKGHLQKAFELLS 452

Query: 541 KMLNEGICPNFATWNVLVRSL 561
            M + G+ P+  T+N+L+  L
Sbjct: 453 MMRSAGVSPDLVTYNILIHGL 473



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 109/263 (41%), Gaps = 25/263 (9%)

Query: 335 GCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK----------- 383
           G    V +   M+ +L   NM H+A  L+  +   N        N F+K           
Sbjct: 92  GSKHTVESVCTMIHILVSGNMNHKAMDLLLHLISYNSGEEG-WHNIFLKIHETHTKRRVL 150

Query: 384 -----GLCGC----GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVT 434
                 L  C         A+KL+ +M+     P I   N LL  LL   ++  A++ + 
Sbjct: 151 ETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLK 210

Query: 435 EIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQG 494
           E++  G+ LN    +  + G C  G +   ++LL +M   G K D + + I+I + CK  
Sbjct: 211 EMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMS 270

Query: 495 KVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATW 554
            +  A  +L ++   G +  D +S +S++ G C  G  +EA   L+      + PN   +
Sbjct: 271 LLKEATSILFKMTQMGVF-LDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVF 326

Query: 555 NVLVRSLFSNLGHLGPVYILDDI 577
           N  +  L ++   L    +  D+
Sbjct: 327 NSFISKLCTDGNMLKAAKVFQDM 349


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 229/460 (49%), Gaps = 14/460 (3%)

Query: 48  QALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGM-EPNVFTYNIL 106
           +A+ +FY+I+    +PT   YN ++  L+ E  +  ++ +Y+ M  +G   P+  TY+ L
Sbjct: 173 KAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSAL 232

Query: 107 LKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV-------EEARELAM 159
           + A CK  R D A  LL EM + G  P A  YT +++ + KL  V       EE R    
Sbjct: 233 ISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYC 292

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           R    V  Y  LI GL K  +++EA+    EM   G  P+ +  + +I+ L   G ++ +
Sbjct: 293 R--PDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDA 350

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKG-YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           + +  +M    C P++ ++ +++K  +    R  E S  + RM   G  P+   YS LI 
Sbjct: 351 IKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILID 410

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C     ++A+ +  +M+E   PP    Y +LID   KA     A++++  +  N  S 
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSS 470

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y  M+K L +      A  L ++M    C PN   +N  + GL   G +D A+  +
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTM 530

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M+ + C+P+I +YN +L+ L +      A  ++  +++  I+ + V+YNT+L  +  A
Sbjct: 531 RRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHA 590

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
           GM  EA +L+ +M   G   D IT++ I+ A    GKV+ 
Sbjct: 591 GMFEEAAKLMKEMNAIGFDYDLITYSSILEAI---GKVDQ 627



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 233/463 (50%), Gaps = 8/463 (1%)

Query: 106 LLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-- 163
           +++ L     +  A  +  ++  + C P A +Y +++  +   G+ E+  EL     +  
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEG 220

Query: 164 ----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                   Y+ALI+  CK  + + A WLL EM D G+ P    Y+ +++ L  + NV  +
Sbjct: 221 QCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGA 280

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
           LG+  +M  + C P++ ++T L++G    GR  EA + ++ M REG  P+ V  + +I+ 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINF 340

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIW-NRMISNGCSP 338
           L   G +D+A+ +  +ME   C P+V TY+ +I    ++ + +     W  RM  +G SP
Sbjct: 341 LGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISP 400

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y+ ++   C+ N   +A  L+E+M  +  PP    + + I  L    R D A +L 
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELF 460

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            ++K+     +   Y  ++  L +  R+ +A +L  E+ + G   N+  YN ++ G+ RA
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARA 520

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
           GM+ EA   + +M   G   D  ++NII+ A  K G  + A+ +L  ++      PD +S
Sbjct: 521 GMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSA-IKPDAVS 579

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           Y ++L  + ++G  +EA   +++M   G   +  T++ ++ ++
Sbjct: 580 YNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAI 622



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 210/432 (48%), Gaps = 7/432 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREF 59
           MI  L  + E + V  L  +M  EG    + V + ++I+++ ++G  + A+ +   +++ 
Sbjct: 196 MIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDN 255

Query: 60  GLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGA 119
           G++PT KIY  ++  L   +       ++  M+     P+VFTY  L++ L K  R+D A
Sbjct: 256 GMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEA 315

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALING 174
           Y    EM  +GC PD V    +++ + K G++++A +L      +R    V  YN +I  
Sbjct: 316 YNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKA 375

Query: 175 LCK-EHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNP 233
           L + + ++ E       M   GI P+  TYS +I   C     E ++ +L +M  +G  P
Sbjct: 376 LFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPP 435

Query: 234 NIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVS 293
              ++ SL+       R   A++L+  +       +   Y+ +I  L   G +D+AV + 
Sbjct: 436 CPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLF 495

Query: 294 YQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQN 353
            +M    C PNV  Y+AL+ G A+AG L  A     RM  +GC P++ +Y  ++  L + 
Sbjct: 496 DEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKT 555

Query: 354 NMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTY 413
               +A  ++  M      P+ V++NT +  L   G  + A KL+ +M       ++ TY
Sbjct: 556 GGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITY 615

Query: 414 NELLDGLLRVNR 425
           + +L+ + +V++
Sbjct: 616 SSILEAIGKVDQ 627



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/270 (19%), Positives = 118/270 (43%), Gaps = 3/270 (1%)

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVLCQNNMFHQAHSL 362
           + +TY ALI             ++   M+ N  C    +  + ++++L    M  +A ++
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177

Query: 363 IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK-QYECLPNITTYNELLDGLL 421
             ++    C P    +N+ I  L   G  +   +L ++M  + +C P+  TY+ L+    
Sbjct: 178 FYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFC 237

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           ++ R   A  L+ E++  G+Q     Y  ++  + +   V  A  L  +M  +  + D  
Sbjct: 238 KLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVF 297

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+  +I    K G+++ A      +R  G   PD +   +++  +  +G + +A    ++
Sbjct: 298 TYTELIRGLGKAGRLDEAYNFFHEMRREG-CRPDTVLMNNMINFLGKAGRLDDAIKLFEE 356

Query: 542 MLNEGICPNFATWNVLVRSLFSNLGHLGPV 571
           M      P+  T+N ++++LF +   +  +
Sbjct: 357 METLRCIPSVVTYNTIIKALFESKSRVSEI 386



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 10/240 (4%)

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN-CPPNTVTFNTFIKGLCGCGRVDWAMKL 397
           +   Y  +++ L     + +   +I++M     C    +  +  I+ L     +  A+ +
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177

Query: 398 LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL-NIVTYNTILHGVC 456
             Q+K  +C P    YN ++  L+     ++  EL  E+   G    + VTY+ ++   C
Sbjct: 178 FYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFC 237

Query: 457 RAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDI 516
           + G    A  LL +M   G +  A  + +++    K   V+ A+ L + +R      PD+
Sbjct: 238 KLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQ-YCRPDV 296

Query: 517 ISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDD 576
            +YT L+ G+  +G + EA+ +  +M  EG  P+     VL+ ++ + LG  G    LDD
Sbjct: 297 FTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPD----TVLMNNMINFLGKAGR---LDD 349


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 221/440 (50%), Gaps = 5/440 (1%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
            + M+ +G    E   +  + + RR G  +  L+ F R+    ++ TV     +LD L  
Sbjct: 178 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 237

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
                M   +   +   G++ NV TYN  ++   K   + G  ++L  M  +G A + V+
Sbjct: 238 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 297

Query: 138 YTTIVSSICKLGQVEEAREL--AMR---FGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
           YT ++     +G++EEA+ L   MR     + V VY ++I+  C+   ++ A  L  EM 
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           D+G+ P+  TY  +I  +C  G +E +  ++ +M  +G + N   F +L+ GY   G   
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA  L   M ++G   +V AY+++  GLC     DEA  + + M E    PN  +++ LI
Sbjct: 418 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 477

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           D + K GN + A +++  M   G  PN++ Y  ++    +     +AH L +++      
Sbjct: 478 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 537

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           P+  T  + I G C  G+VD A+KL D+M Q   +PN+ TY  ++ GL +  R +EAF+L
Sbjct: 538 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 597

Query: 433 VTEIEKCGIQLNIVTYNTIL 452
             E+++ G+  +   Y++++
Sbjct: 598 YDEMKETGLTPDDTVYSSLV 617



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 192/390 (49%), Gaps = 5/390 (1%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V++   + G  E   K+   +   G+K  V  YN  ++          +  I + M+++G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           +  NV TY +L+       +++ A +L  EM  KG   D   YT+I+S  C+ G V+ A 
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 156 ELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
            L               Y ALI+G+CK  ++E A  L+ EM  +GID N + ++T+I   
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
           C+ G V+ +L +   M  +G   ++ ++ S+  G     R  EA  L   M+  G  PN 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNR 330
           ++++TLI   C  G+  EA  V  +MEE    PN+ TY+ LIDG++K GN+  A ++ + 
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530

Query: 331 MISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGR 390
           + + G  P+V   T ++   C +     A  L ++M      PN VT+   I GL   GR
Sbjct: 531 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590

Query: 391 VDWAMKLLDQMKQYECLPNITTYNELLDGL 420
            + A KL D+MK+    P+ T Y+ L+  L
Sbjct: 591 SEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 212/444 (47%), Gaps = 6/444 (1%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICK 147
           + +M++ G   +  +  + L AL +  +VD   +    M N        S T ++  +CK
Sbjct: 178 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 237

Query: 148 LGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVIT 202
            G VE  R+L     A    + V  YNA I G  K   +     +L  M   G+  NV+T
Sbjct: 238 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 297

Query: 203 YSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMI 262
           Y+ +I    ++G +E +  +  +M  +G   +++ +TS++      G    A  L++ M 
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357

Query: 263 REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLL 322
            +G +P+   Y  LIHG+C  G M+ A  +  +M+      N   ++ LIDG+ ++G + 
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417

Query: 323 GASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFI 382
            A ++   M   G   +V AY  +   LC+ N   +A  L+  M      PNT++F T I
Sbjct: 418 EALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLI 477

Query: 383 KGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQ 442
              C  G    A ++  +M++   +PNI TYN L+DG  +   +KEA +L  E+E  G+ 
Sbjct: 478 DIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLI 537

Query: 443 LNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
            ++ T  +++HG C  G V  A +L  +M   G   + +T+  +I    K G+   A +L
Sbjct: 538 PDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKL 597

Query: 503 LDRIRGGGEWNPDIISYTSLLWGI 526
            D ++  G   PD   Y+SL+  +
Sbjct: 598 YDEMKETG-LTPDDTVYSSLVGSL 620



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 191/366 (52%), Gaps = 11/366 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
            IE   ++ ++ GV  +L  M+ EGV+C+   +  +I+ +  +G  E+A ++F  +RE G
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++  V +Y  I+              ++  M   G+ P+  TY  L+  +CK  +++ A 
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAM-----RFGSGVSVYNALINGL 175
            L+ EM  KG   + V + T++   C+ G V+EA  L +        S V  YN++ +GL
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK ++ +EA  LL  MV+RG+ PN ++++T+I   C  GN   +  +  +M  +G  PNI
Sbjct: 446 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 505

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ GY   G   EA  L + +   G +P+V   ++LIHG C +G +D A+ +  +
Sbjct: 506 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 565

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M +    PNV TY+A+I G +K G    A ++++ M   G +P+   Y+ +V  L     
Sbjct: 566 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL----- 620

Query: 356 FHQAHS 361
            H A S
Sbjct: 621 -HSAES 625



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 248/559 (44%), Gaps = 45/559 (8%)

Query: 46  AEQALKMFYRIREFGLKPTVKIYNHIL---------DALLAENRFSMINPIYS-NMKRDG 95
           AE  L  F+ IR+   KP ++ Y  ++         D L    +F+ I  +++     DG
Sbjct: 68  AESCLDFFHFIRKNYYKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDG 127

Query: 96  MEPNVFT-----------------------YNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
           +   V                         +++L +    N     A +    M  KG  
Sbjct: 128 LRVPVTVIASLVDDACNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFH 187

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMR---FGSGVSVYNALI--NGLCKEHKIEEAFWL 187
            D  S    + ++ + GQV+       R       V+VY+  I  +GLCK   +E    L
Sbjct: 188 IDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKL 247

Query: 188 LCEMVDRGIDPNVITYSTIISSL---CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           + E+  +G+  NV+TY+  I       D+G V     IL  M   G   N+ ++T L+ G
Sbjct: 248 MDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAE---ILTLMEKEGVACNVVTYTLLIHG 304

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           +   G+  EA  L+  M  +G   +V  Y+++I   C +G++  A+ +  +M +    P+
Sbjct: 305 FSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPS 364

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
             TY ALI G  KAG +  A  + N M   G   N V +  ++   C++ M  +A  L  
Sbjct: 365 AHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQV 424

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
            M  +    +   +N+   GLC   R D A  LL  M +    PN  ++  L+D   +  
Sbjct: 425 VMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 484

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
              EA  +  E+E+ G   NI+TYN ++ G  + G + EA +L  ++   G   D  T  
Sbjct: 485 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 544

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I+  C  GKV+ A++L D +   G   P++++YT+++ G+   G  +EAF    +M  
Sbjct: 545 SLIHGECIDGKVDMALKLFDEMPQRG-LVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKE 603

Query: 545 EGICPNFATWNVLVRSLFS 563
            G+ P+   ++ LV SL S
Sbjct: 604 TGLTPDDTVYSSLVGSLHS 622


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 255/521 (48%), Gaps = 14/521 (2%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S+IN Y ++G   +A ++   ++++ LKP    YN +LD    +  F     +   M   
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G+   V TYN LLK L     V+ A  +   M  +G AP+ V+Y T++ +  K+G  + A
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 155 -----RELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
                  L+  F   +++YN +I G CK  K+ +A  +  +M + G  P+ ITY T+I  
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C VGN+  +L +       G + +   + SL+ G        + + L   M      PN
Sbjct: 581 YCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y +LI G C  G MD+A +  ++M +    PN+   S ++    + G +  A+ I +
Sbjct: 641 VVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILH 700

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFH-QAHSLIE---KMAFENCPPNTVTFNTFIKGL 385
           ++      P + A+   V+ L ++++ H +   +++   K A      N + +N  I GL
Sbjct: 701 QIAD--IDP-IAAHAHSVE-LPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGL 756

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           C    +D   ++L  +      P+  TY  L+     V +V EAF L  ++   G+  NI
Sbjct: 757 CKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNI 816

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           V YN +++G+C++G +  A +L  K+  +G     +T+N +I  YCK G+   A++L D+
Sbjct: 817 VVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDK 876

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEG 546
           +R  G   P  I+Y++L+ G+   G  +++   L +M+  G
Sbjct: 877 MREEG-ICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/615 (24%), Positives = 275/615 (44%), Gaps = 76/615 (12%)

Query: 19  QQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAE 78
           +QM   G+      +  ++N+Y + G  ++A      +     +P V  YN ++D  ++ 
Sbjct: 245 EQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSL 304

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                   + + M   G+  N  TY +L+K  CK  +++ A KL+  M  K    D   Y
Sbjct: 305 GDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVY 364

Query: 139 TTIVSSICKLGQVEEA---RELAMRFGSGVSV---------------------------- 167
             ++ + C  G+V++A   R+  ++ G  ++                             
Sbjct: 365 GVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKD 424

Query: 168 ---------YNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
                    YN L++G CK+    +AF L  EM ++G++  V+TY+T++ +L  VG+VE 
Sbjct: 425 WNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEH 484

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +L I   M  RG  PN  ++ +LL  +   G    A  +W   + +GF  ++  Y+T+I 
Sbjct: 485 ALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMIC 544

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C    + +A  +  +M+E   PP+  TY  LIDG+ K GNL+ A ++ +    +G S 
Sbjct: 545 GFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISS 604

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +   Y  ++  + ++    + + L+ +M      PN VT+ + I G C  G +D A    
Sbjct: 605 STEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAY 664

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKC--------GIQL------- 443
            +M      PNI   ++++  L R  ++ EA  ++ +I            ++L       
Sbjct: 665 FKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRH 724

Query: 444 --------------------NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITF 483
                               N + YN  + G+C++  + +  ++L  +L++G   D  T+
Sbjct: 725 LETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTY 784

Query: 484 NIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKML 543
             +I+A    GKVN A  L D +   G   P+I+ Y +L+ G+C SG +  A     K+ 
Sbjct: 785 CSLIHACSAVGKVNEAFCLRDDMINAG-LVPNIVVYNALINGLCKSGNLDRARRLFNKLA 843

Query: 544 NEGICPNFATWNVLV 558
            +G+ P   T+N L+
Sbjct: 844 RKGLSPTVVTYNTLI 858



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/588 (25%), Positives = 265/588 (45%), Gaps = 46/588 (7%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++++  + G A +AL ++ ++   G+ P +  Y  +++A   E R          M+R 
Sbjct: 226 SLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS 285

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
             EPNV TYN L+        V GA K+L  M  KG   ++ +YT ++   CK GQ+E+A
Sbjct: 286 CCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQA 345

Query: 155 REL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
            +L              VY  LI+  C   ++++A  +   M+  G+  N +  +++I+ 
Sbjct: 346 EKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLING 405

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
            C +G+V  +  +L  M      P+ + + +LL G+       +A  L + M  +G    
Sbjct: 406 YCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFT 465

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
           VV Y+TL+  L   G ++ A+ +   M +    PN  TY  L+D F K G    A  IW 
Sbjct: 466 VVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWK 525

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
             +S G + ++  Y  M+   C+     QA  +  KM     PP+ +T+ T I G C  G
Sbjct: 526 DALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVG 585

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            +  A+KL D  ++     +   YN L+ G+ R   +++   L+ E++   +  N+VTY 
Sbjct: 586 NLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYG 645

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
           +++ G C  GM+ +A+    KM+ +G   + I  + I+ +  + GK++ A  +L +I   
Sbjct: 646 SLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQI--- 702

Query: 510 GEWNP-------------------------------------DIISYTSLLWGICNSGGM 532
            + +P                                     + I Y   + G+C S  +
Sbjct: 703 ADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNI 762

Query: 533 QEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            +    L  +L +G CP+  T+  L+ +  S +G +   + L D M N
Sbjct: 763 DDVRRILSDLLLKGFCPDNYTYCSLIHAC-SAVGKVNEAFCLRDDMIN 809



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/542 (26%), Positives = 239/542 (44%), Gaps = 66/542 (12%)

Query: 57  REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV 116
           REF   PTV  ++ IL     +        ++ NM + G  P++ + N LL  L +N   
Sbjct: 180 REFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEA 237

Query: 117 DGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLC 176
             A  +  +M   G  PD  SYT +V                              N  C
Sbjct: 238 FKALLVYEQMIALGILPDIFSYTIMV------------------------------NAYC 267

Query: 177 KEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIH 236
           KE +++EAF  + EM     +PNV+TY+++I     +G+V  +  +L  M  +G   N  
Sbjct: 268 KEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSR 327

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
           ++T L+KGY   G+  +A  L   M+ +    +   Y  LIH  C+ G +D+A+ +   M
Sbjct: 328 TYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM 387

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
            +     N    ++LI+G+ K G++  A+++   M      P+   Y  ++   C+   F
Sbjct: 388 LKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDF 447

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            +A  L ++M  +      VT+NT +K L   G V+ A+ + + M +    PN  TY  L
Sbjct: 448 IKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTL 507

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           LD   +V     A  +  +    G   +I  YNT++ G C+   +V+A ++  KM   G 
Sbjct: 508 LDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGF 567

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGG-------------------------- 510
             D IT+  +I  YCK G +  A++L D     G                          
Sbjct: 568 PPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNG 627

Query: 511 --------EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
                   E +P++++Y SL+ G C+ G M +A+    KM+++GI PN    + +V SL+
Sbjct: 628 LLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLY 687

Query: 563 SN 564
            +
Sbjct: 688 RH 689



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 225/465 (48%), Gaps = 42/465 (9%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L  +M  +GV+ +   + +++ +   VG  E AL ++  + + G+ P    Y  +LDA  
Sbjct: 453 LCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFF 512

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
               F     I+ +    G   ++  YN ++   CK  ++  A ++ ++M   G  PD +
Sbjct: 513 KVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEI 572

Query: 137 SYTTIVSSICKLGQVEEA---RELAMRFG--SGVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y T++   CK+G + EA   ++++ R G  S   +YN+LI G+ +  ++++   LL EM
Sbjct: 573 TYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEM 632

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
            +R + PNV+TY ++I+  CD G ++ +     +M  +G  PNI   + ++      G+ 
Sbjct: 633 KNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKI 692

Query: 252 HEA------------------------SDLWN---RMIREGF--------LPNVVAYSTL 276
            EA                        SDL +   + I + F        + N + Y+  
Sbjct: 693 DEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIA 752

Query: 277 IHGLCSNGSMDEAVSV-SYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG 335
           I GLC + ++D+   + S  + +  CP N  TY +LI   +  G +  A  + + MI+ G
Sbjct: 753 ITGLCKSKNIDDVRRILSDLLLKGFCPDNY-TYCSLIHACSAVGKVNEAFCLRDDMINAG 811

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             PN+V Y  ++  LC++    +A  L  K+A +   P  VT+NT I G C  GR   A+
Sbjct: 812 LVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEAL 871

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCG 440
           +L D+M++    P+  TY+ L+ GL    + +++  L+ E+ K G
Sbjct: 872 ELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 176/361 (48%), Gaps = 13/361 (3%)

Query: 15  QYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDA 74
           Q +  +MK  G    E  + ++I+ Y +VG   +ALK+       G+  + ++YN ++  
Sbjct: 556 QEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITG 615

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
           +        +N + + MK   + PNV TY  L+   C    +D AY    +M +KG AP+
Sbjct: 616 VFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPN 675

Query: 135 AVSYTTIVSSICKLGQVEEARELAMRFGS---------GVSVYNALINGLCKEHKIEEAF 185
            +  + IVSS+ + G+++EA  +  +             V +  + +  L +  KI ++F
Sbjct: 676 IIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHL-ETQKIVDSF 734

Query: 186 WLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGY 245
                 +      N I Y+  I+ LC   N++    IL  + ++G  P+ +++ SL+   
Sbjct: 735 GKKAMSIPIS---NNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHAC 791

Query: 246 LLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNV 305
              G+ +EA  L + MI  G +PN+V Y+ LI+GLC +G++D A  +  ++      P V
Sbjct: 792 SAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTV 851

Query: 306 TTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEK 365
            TY+ LIDG+ K G    A ++ ++M   G  P+ + Y+ ++  L       Q+  L+ +
Sbjct: 852 VTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNE 911

Query: 366 M 366
           M
Sbjct: 912 M 912



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 117/263 (44%), Gaps = 27/263 (10%)

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAH-- 360
           P+V++Y  ++   ++A           RM        V  Y   + VLC+NN    A   
Sbjct: 130 PDVSSYCKIVHILSRA-----------RMYKE-----VRVYLNELVVLCKNNYIASAVWD 173

Query: 361 ---SLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELL 417
              S+  + +F     +   F+  +K     G   +A+ + D M +   +P++ + N LL
Sbjct: 174 ELVSVYREFSF-----SPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLL 228

Query: 418 DGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
             L++     +A  +  ++   GI  +I +Y  +++  C+ G V EAF  + +M     +
Sbjct: 229 SNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCE 288

Query: 478 LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFI 537
            + +T+N +I  Y   G V  A ++L  +   G    +  +YT L+ G C  G M++A  
Sbjct: 289 PNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG-IPENSRTYTLLIKGYCKRGQMEQAEK 347

Query: 538 YLQKMLNEGICPNFATWNVLVRS 560
            +  M+ + +  +   + VL+ +
Sbjct: 348 LIGCMMEKNLFVDEHVYGVLIHA 370


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 259/524 (49%), Gaps = 28/524 (5%)

Query: 46  AEQALKMFYRI-REFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYN 104
           A QAL++F+ + R   L    ++Y+ I+  L     ++    +     RD          
Sbjct: 50  ANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLM----RD---------- 95

Query: 105 ILLKALCKNNRVD---GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AM 159
            L++ L  + R       + +L  + +    P+   +  ++ +  ++G VEEA  +   M
Sbjct: 96  -LIQCLQNSRRSRICCSVFNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKM 152

Query: 160 RFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
                +   N +++GL K+ + +  + +  +MV RG  PNV+TY T+I   C  G+   +
Sbjct: 153 DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKA 212

Query: 220 LGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHG 279
             +  +M  +   P +  +T L++G     R  EA  ++  M   G LPN+  Y+T++ G
Sbjct: 213 FRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDG 272

Query: 280 LCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPN 339
            C    + +A+ +  +M  +   PNV T+  LIDG  K   ++ A +    M S G  PN
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPN 332

Query: 340 VVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLD 399
           +  Y C++   C+     +A SL  ++      P+  T++  IKGLCG  R++ A  LL 
Sbjct: 333 IFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 400 QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAG 459
           +MK+   LPN  TYN L+DG  +   +++A E+ +++ + GI+ NI+T++T++ G C+AG
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 460 MVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISY 519
            +  A  L  +M+I+G   D + +  +I  + K G    A +L   ++  G  +P++ + 
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG-LHPNVFTL 511

Query: 520 TSLLWGICNSGGMQEAF-IYLQKMLNEGICPNFATWNVLVRSLF 562
           + L+ G+C  G + +A  ++L K    G     +  N L RSL+
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAK---TGTDTTGSKTNELDRSLY 552



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 211/417 (50%), Gaps = 10/417 (2%)

Query: 22  KVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           ++E    +  VF  +I ++  +GL E+AL ++Y++    + P ++  N +LD L+ + RF
Sbjct: 118 RLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRF 174

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTI 141
             +  +Y +M   G  PNV TY  L+   C+      A++L  EM  K   P  V YT +
Sbjct: 175 DTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTIL 234

Query: 142 VSSICKLGQVEEAREL--AMRFGSG----VSVYNALINGLCKEHKIEEAFWLLCEMVDRG 195
           +  +C   ++ EA  +   MR  SG    +  YN +++G CK   +++A  L  EM+  G
Sbjct: 235 IRGLCGESRISEAESMFRTMR-NSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + PNV+T+  +I  LC    + ++   L  M   G  PNI  +  L+ GY   G   EA 
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
            L + + +   LP+V  YS LI GLC    M+EA  +  +M++    PN  TY+ LIDG+
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K GN+  A ++ ++M   G  PN++ ++ ++   C+      A  L  +M  +   P+ 
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           V +   I G    G    A +L  +M++    PN+ T + L+DGL +  R+ +A +L
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 154/598 (25%), Positives = 277/598 (46%), Gaps = 43/598 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K   D +  +   M   G S +   + ++I+   R G   +A ++F  + E  
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + PTV IY  ++  L  E+R S    ++  M+  GM PN++TYN ++   CK   V  A 
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGL 175
           +L  EM   G  P+ V++  ++  +CK  ++  AR+  +   S      + VYN LI+G 
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK   + EA  L  E+    I P+V TYS +I  LC V  +E + G+L +M  +G  PN 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++ +L+ GY   G   +A ++ ++M  +G  PN++ +STLI G C  G M+ A+ +  +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M      P+V  Y+ALIDG  K GN   A ++   M   G  PNV   +C++  LC++  
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523

Query: 356 FHQAHSL-IEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQY-ECLPNIT-- 411
              A  L + K   +     T   +  +  +C       A+ L   + +   C+  +T  
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCS-----LALSLFRGISEPCICVIRVTKL 578

Query: 412 --TYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQL-- 467
             T N+    L    +  ++ + +    +      ++ +  IL  + +    +++F L  
Sbjct: 579 FATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRIL--LRKNPSSIDSFSLMF 636

Query: 468 ------LGKMLIEGTKLDAITFNI-----------IIYAYCKQGKVNNAIQLLDRIRGGG 510
                 L   L+EG ++ A+  N            +I  Y   G V +A  + D I    
Sbjct: 637 ALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIP--- 693

Query: 511 EWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHL 568
             + ++IS+TS++    ++    +A    ++M  + + P+  T  V + S  ++LG L
Sbjct: 694 --SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVAL-SACADLGAL 748



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 6/380 (1%)

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
           F +L  +      PNV  +  +I +  ++G VE +L +  +M V    P + +   +L G
Sbjct: 113 FNVLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDG 167

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
            +  GR      ++  M+  G  PNVV Y TLI G C  G   +A  +  +M E    P 
Sbjct: 168 LVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPT 227

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
           V  Y+ LI G      +  A  ++  M ++G  PN+  Y  M+   C+     +A  L +
Sbjct: 228 VVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQ 287

Query: 365 KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVN 424
           +M  +   PN VTF   I GLC    +  A K L  M  +  +PNI  YN L+DG  +  
Sbjct: 288 EMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAG 347

Query: 425 RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFN 484
            + EA  L +EIEK  I  ++ TY+ ++ G+C    + EA  LL +M  +G   +A+T+N
Sbjct: 348 NLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYN 407

Query: 485 IIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLN 544
            +I  YCK+G +  AI++  ++   G   P+II++++L+ G C +G M+ A     +M+ 
Sbjct: 408 TLIDGYCKEGNMEKAIEVCSQMTEKG-IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVI 466

Query: 545 EGICPNFATWNVLVRSLFSN 564
           +G+ P+   +  L+   F +
Sbjct: 467 KGLLPDVVAYTALIDGHFKD 486



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/585 (20%), Positives = 249/585 (42%), Gaps = 44/585 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +  E+   +  L  M   GV  +  V+  +I+ Y + G   +AL +   I +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P V  Y+ ++  L   +R    + +   MK+ G  PN  TYN L+   CK   ++ A 
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELAMR-FGSGVSVYNALINGL 175
           ++  +M  KG  P+ ++++T++   CK G++E A     E+ ++     V  Y ALI+G 
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGI------------- 222
            K+   +EAF L  EM + G+ PNV T S +I  LC  G +  ++ +             
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSK 543

Query: 223 ---LGQMFVRGCNPNIHSFTSLLKGYLLGGRTHE--ASDLWNRMIREGFLPNVVAYSTLI 277
              L +   + C+  +  F  + +  +   R  +  A++   +      L    +  TL 
Sbjct: 544 TNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLK 603

Query: 278 HGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL--IDGFAKAGNLLGASQIWNRMISNG 335
             L S+ +    +     + +N  P ++ ++S +  +       +L+   Q+   +I+ G
Sbjct: 604 RYLQSSNTSKVLLFFRILLRKN--PSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFG 661

Query: 336 CSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAM 395
             P +   T ++ +         AH++ +++  +N     +++ + I       R + A+
Sbjct: 662 FEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKN----LISWTSVISAYVDNQRPNKAL 717

Query: 396 KLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGV 455
           +L  QM+  +  P+I T    L     +  +     +   I   G+  ++   N++++  
Sbjct: 718 QLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMY 777

Query: 456 CRAGMVVEA--FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWN 513
            + G +  A  F L+          + +TF  ++ A    G V    Q    ++      
Sbjct: 778 SKCGEIGTARRFSLVLP--------NDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLR 829

Query: 514 PDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           P I  +  ++  +C +G + EA+ ++ KM    + PN   W  L+
Sbjct: 830 PRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLL 871



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 98/465 (21%), Positives = 185/465 (39%), Gaps = 37/465 (7%)

Query: 20  QMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN 79
           QM  +G+  +   F ++I+ Y + G  E A+ ++  +   GL P V  Y  ++D    + 
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 80  RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE------MGNKGCAP 133
                  ++  M+  G+ PNVFT + L+  LCK+ R+  A KL +        G+K    
Sbjct: 488 NTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNEL 547

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVD 193
           D   Y     ++     + E     +R     +  N     L    K  ++   L   + 
Sbjct: 548 DRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQ 607

Query: 194 RGIDPNVITYSTII-----SSLCDVG--------NVETSLGILGQMFVR----GCNPNIH 236
                 V+ +  I+     SS+             +++SL    QM       G  P I 
Sbjct: 608 SSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIF 667

Query: 237 SFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM 296
             TSL+  Y   G   +A ++++ +  +    N+++++++I     N   ++A+ +  QM
Sbjct: 668 LQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKALQLFRQM 723

Query: 297 EENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMF 356
           + +   P++ T +  +   A  G L     I   +   G   ++     ++      NM+
Sbjct: 724 QMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI------NMY 777

Query: 357 HQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ-YECLPNITTYNE 415
            +   +     F    PN VTF   +      G V+   +    MK+ Y   P I+ +  
Sbjct: 778 SKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 837

Query: 416 LLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
           ++D L R   + EA+E +    K  ++ N V + T+L      GM
Sbjct: 838 MVDLLCRAGLLTEAYEFIL---KMPVRPNAVVWRTLLGACSLQGM 879



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 106/266 (39%), Gaps = 35/266 (13%)

Query: 51  KMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKAL 110
           +M   +  FG +P + +   ++    A    +  + ++  +       N+ ++  ++ A 
Sbjct: 652 QMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIP----SKNLISWTSVISAY 707

Query: 111 CKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE--EARELAMR---FGSGV 165
             N R + A +L  +M      PD V+ T  +S+   LG ++  E     +R     + +
Sbjct: 708 VDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDL 767

Query: 166 SVYNALIN--GLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGIL 223
            + N+LIN    C E      F L+         PN +T+  ++ +    G VE      
Sbjct: 768 CLNNSLINMYSKCGEIGTARRFSLVL--------PNDVTFMGVLMACSHAGLVEE----- 814

Query: 224 GQMFVR------GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLI 277
           G+   R         P I  F  ++      G   EA   +  +++    PN V + TL+
Sbjct: 815 GKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL 871

Query: 278 HGLCS-NGSMDEAVSVSYQMEENSCP 302
            G CS  G  D+ + V  Q+++   P
Sbjct: 872 -GACSLQGMWDKKMLVRNQIKQRRDP 896


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 272/590 (46%), Gaps = 44/590 (7%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSY-RRVGLAEQALKMFYRIREFGLKPTVKIY 68
           + + V+   ++ K  G+      +  ++ +  RR+ L   A ++   +REFG  P+   Y
Sbjct: 235 KFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDL-NLACELLKEMREFGWVPSKGTY 293

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++ A + +  F     +   M   G+  NV     L+K  C    V+ A +L  E+  
Sbjct: 294 TAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVE 353

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEARELAMRFG-----SGVSVYNALINGLCKEHKIEE 183
            G  PD V ++ +++   K+G +E+A EL  R         V + N+L+ G  +++ +E 
Sbjct: 354 GGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEH 413

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           A+ L  E V+ GI  NV+TY+ ++  L ++G V  +  +  +M  +G  P++ S+ +L+ 
Sbjct: 414 AYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLIL 472

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ-MEENSCP 302
           G+   G   +A  +   ++  G  PN V Y+ LI G    G  + A  V  Q M  N  P
Sbjct: 473 GHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAP 532

Query: 303 PNVT----------------------------------TYSALIDGFAKAGNLLGASQIW 328
            + T                                  TY+++IDGF K G +  A   +
Sbjct: 533 TDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAY 592

Query: 329 NRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGC 388
             M  +G SP+V+ YT ++  LC++N    A  +   M ++    + V ++  I G C  
Sbjct: 593 REMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKM 652

Query: 389 GRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTY 448
             ++ A K   ++      PN   YN ++ G + +N ++ A  L  E+ K  +  ++  Y
Sbjct: 653 HDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVY 712

Query: 449 NTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRG 508
            +I+ G+ + G +  A  L  +ML +    D + + ++I      G++ NA ++L  +  
Sbjct: 713 TSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEM-D 771

Query: 509 GGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           G    P ++ Y  L+ G    G +QEAF    +ML++G+ P+  T+++LV
Sbjct: 772 GNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 161/666 (24%), Positives = 292/666 (43%), Gaps = 111/666 (16%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDAL--------- 75
           G      VF  ++ S+ RV     A++ F  + E  L P V I N++L A+         
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 76  --------------------------LAENRFSMINPIYSNMKRDGMEPNVFTYNILLKA 109
                                     + E +F  +   +   K  G+E +   Y+IL++A
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 110 LCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-----G 164
           +C+   ++ A +LL EM   G  P   +YT ++ +  K G   EA  L     S      
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
           V V  +L+ G C    +  A  L  E+V+ G+ P+V+ +S +I+    VG++E +  +  
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYT 384

Query: 225 QMFVRGCNPNIHSFTSLLKGY--------------------------------LLG--GR 250
           +M + G  PN+    SLL+G+                                 LG  G+
Sbjct: 385 RMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGK 444

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSA 310
            +EA +LW +M+ +G  P++V+Y+ LI G C  G MD+A S+   + E    PN  TY+ 
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504

Query: 311 LIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFEN 370
           LIDGF K G+   A  ++ +M++   +P    +  ++  L +     +    +     + 
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564

Query: 371 CPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAF 430
               ++T+N+ I G    G VD A+    +M +    P++ TY  L+DGL + N++  A 
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624

Query: 431 ELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAY 490
           E+ ++++  G++L++V Y+ ++ G C+   +  A +   ++L  G   + + +N +I  +
Sbjct: 625 EMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGF 684

Query: 491 -----------------------------------CKQGKVNNAIQLLDRIRGGGEWNPD 515
                                               K+GK++ A+ L   +    +  PD
Sbjct: 685 IHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEML-SKDIVPD 743

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILD 575
           I+ YT L+ G+ N+G ++ A   L++M    I P+   +N+L+   F   G+L   + L 
Sbjct: 744 IVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFRE-GNLQEAFRLH 802

Query: 576 DIMANK 581
           D M +K
Sbjct: 803 DEMLDK 808



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 250/496 (50%), Gaps = 7/496 (1%)

Query: 35  SVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRD 94
           S++  Y  +G    AL++F  + E G+ P V I++ +++             +Y+ MK  
Sbjct: 330 SLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLM 389

Query: 95  GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA 154
           G++PNVF  N LL+   + N ++ AY L  E    G   + V+Y  ++  + +LG+V EA
Sbjct: 390 GIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEA 448

Query: 155 RELAMRFGS-GVS----VYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISS 209
             L  +  S G++     YN LI G CK+  +++A+ +L  +++RG+ PN +TY+ +I  
Sbjct: 449 CNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDG 508

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
               G+ E +  +  QM      P  H+F +++ G    GR  E  D  N  I++GF+  
Sbjct: 509 FFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVST 568

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWN 329
            + Y+++I G    G++D A+    +M E+   P+V TY++LIDG  K+  +  A ++ +
Sbjct: 569 SITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHS 628

Query: 330 RMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCG 389
            M   G   +VVAY+ ++   C+ +    A     ++      PNTV +N+ I G     
Sbjct: 629 DMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLN 688

Query: 390 RVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYN 449
            ++ A+ L  +M + +   ++  Y  ++ GLL+  ++  A +L +E+    I  +IV Y 
Sbjct: 689 NMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYT 748

Query: 450 TILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGG 509
            +++G+   G +  A ++L +M         + +NI+I    ++G +  A +L D +   
Sbjct: 749 VLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDK 808

Query: 510 GEWNPDIISYTSLLWG 525
           G   PD  +Y  L+ G
Sbjct: 809 G-LVPDDTTYDILVNG 823



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 218/479 (45%), Gaps = 77/479 (16%)

Query: 23  VEGVSCSEGVFISV-INSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRF 81
           VEG    + V  SV IN   +VG  E+A +++ R++  G++P V I N +L+    +N  
Sbjct: 352 VEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLL 411

Query: 82  SMINPIYSNMKRDGMEPNVFTYNILLKAL------------------------------- 110
                ++      G+  NV TYNILLK L                               
Sbjct: 412 EHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNL 470

Query: 111 ----CKNNRVDGAYKLLVEMGNKGCAPDAVSYT--------------------------- 139
               CK   +D AY +L  +  +G  P+AV+YT                           
Sbjct: 471 ILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANI 530

Query: 140 --------TIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
                   T+++ + K G+V E ++     +   F S    YN++I+G  KE  ++ A  
Sbjct: 531 APTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALL 590

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYL 246
              EM + GI P+VITY+++I  LC    +  +L +   M  +G   ++ ++++L+ G+ 
Sbjct: 591 AYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFC 650

Query: 247 LGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVT 306
                  AS  +  ++  G  PN V Y+++I G     +M+ A+++  +M +N  P ++ 
Sbjct: 651 KMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQ 710

Query: 307 TYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKM 366
            Y+++I G  K G L  A  +++ M+S    P++V YT ++  L  N     A  ++++M
Sbjct: 711 VYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEM 770

Query: 367 AFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNR 425
              N  P+ + +N  I G    G +  A +L D+M     +P+ TTY+ L++G L+V+ 
Sbjct: 771 DGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSH 829



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 238/550 (43%), Gaps = 79/550 (14%)

Query: 93  RDGMEPNVFTYNILLK-----------------------------------ALCKNNRVD 117
           R G E +   +N LLK                                   A+ + N V 
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202

Query: 118 GAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVSV----YNALI 172
            A +L  EM  +G   D  +   ++ +  K G+ EE  +      G G+ V    Y+ L+
Sbjct: 203 DARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
             +C+   +  A  LL EM + G  P+  TY+ +I +    GN   +L +  +M   G  
Sbjct: 263 QAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLP 322

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            N+    SL+KGY + G  + A  L++ ++  G +P+VV +S LI+G    G M++A  +
Sbjct: 323 MNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYEL 382

Query: 293 SYQMEENSCPPNVTTYSALIDGF----------------------------------AKA 318
             +M+     PNV   ++L++GF                                   + 
Sbjct: 383 YTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGEL 442

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G +  A  +W +M+S G +P++V+Y  ++   C+     +A+S+++ +      PN VT+
Sbjct: 443 GKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTY 502

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
              I G    G  + A  + +QM      P   T+N +++GL +  RV E  + +    K
Sbjct: 503 TLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIK 562

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            G     +TYN+I+ G  + G V  A     +M   G   D IT+  +I   CK  K+  
Sbjct: 563 QGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGL 622

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+++   ++  G    D+++Y++L+ G C    M+ A  +  ++L+ G+ PN   +N   
Sbjct: 623 ALEMHSDMKYKG-MKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYN--- 678

Query: 559 RSLFSNLGHL 568
            S+ S   HL
Sbjct: 679 -SMISGFIHL 687



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 189/387 (48%), Gaps = 40/387 (10%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ LGE  +++    L ++M  +G++ S   + ++I  + + G  ++A  M   I E G
Sbjct: 435 LLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERG 494

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRV---- 116
           LKP    Y  ++D    +        ++  M    + P   T+N ++  L K  RV    
Sbjct: 495 LKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQ 554

Query: 117 ----------------------DGAYK-------LLV--EMGNKGCAPDAVSYTTIVSSI 145
                                 DG +K       LL   EM   G +PD ++YT+++  +
Sbjct: 555 DKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGL 614

Query: 146 CKLGQVEEARELA--MRFGS---GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNV 200
           CK  ++  A E+   M++      V  Y+ALI+G CK H +E A     E++D G+ PN 
Sbjct: 615 CKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNT 674

Query: 201 ITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR 260
           + Y+++IS    + N+E +L +  +M       ++  +TS++ G L  G+   A DL++ 
Sbjct: 675 VVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSE 734

Query: 261 MIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGN 320
           M+ +  +P++V Y+ LI+GL +NG ++ A  +  +M+ N+  P+V  Y+ LI G  + GN
Sbjct: 735 MLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGN 794

Query: 321 LLGASQIWNRMISNGCSPNVVAYTCMV 347
           L  A ++ + M+  G  P+   Y  +V
Sbjct: 795 LQEAFRLHDEMLDKGLVPDDTTYDILV 821



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 152/330 (46%), Gaps = 5/330 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+   +K + +    + +QM    ++ ++  F +VIN   + G   +         + G
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
              T   YN I+D    E         Y  M   G+ P+V TY  L+  LCK+N++  A 
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           ++  +M  KG   D V+Y+ ++   CK+  +E A +     L +       VYN++I+G 
Sbjct: 625 EMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGF 684

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
              + +E A  L  EM+   +  ++  Y++II  L   G +  +L +  +M  +   P+I
Sbjct: 685 IHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDI 744

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
             +T L+ G    G+   AS +   M      P+V+ Y+ LI G    G++ EA  +  +
Sbjct: 745 VMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDE 804

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
           M +    P+ TTY  L++G  K  + LG S
Sbjct: 805 MLDKGLVPDDTTYDILVNGKLKVSHTLGGS 834


>gi|357486821|ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355515033|gb|AES96656.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 749

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/598 (26%), Positives = 274/598 (45%), Gaps = 61/598 (10%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L+ +K  GV  +     +++ SY  +G  E+A++ F R+REFG++P   +YN IL  +L 
Sbjct: 72  LELLKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAHMYNTILRDVLN 131

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           E    +   +Y+ M +  +EPN +TYN+L+   CK   V GA ++L EM   G  P  +S
Sbjct: 132 EKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLS 191

Query: 138 YTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMV 192
            T+I+   C+   V+EA +L        +   +   N ++NG CK  ++EEA   +  + 
Sbjct: 192 TTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIK 251

Query: 193 DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTH 252
           + G   N  +YS++I++         +     +MF +G  P++  +  +++G    GR  
Sbjct: 252 NDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVG 311

Query: 253 EASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALI 312
           EA+ +   M + G  P+   Y+ +I GLC  G ++ A S+  ++ E+    NV T++ LI
Sbjct: 312 EAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEH----NVCTHTILI 367

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA------------H 360
               K G +  A +++N+M   GC P+VV +  ++  LC+ N   +A            H
Sbjct: 368 CEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLFCKLEVGRRH 427

Query: 361 SL----------------IEKMAFENC-------------------PPNTVTFNTFIKGL 385
           SL                + K A E C                    P+ +T+N  +  L
Sbjct: 428 SLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITYNILLNAL 487

Query: 386 CGCGRVDWAMKLLD--QMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQL 443
           C    V+ A    +  Q K Y   P+  TY  ++ GL  V+R  EAF++   ++K G + 
Sbjct: 488 CMDREVNAAYNFFEFLQKKGYPS-PDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEP 546

Query: 444 NIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
            +  Y T++  +CR   V  AF L  + L      D  + +  +  Y    K+   I+ L
Sbjct: 547 TLSVYRTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDNDSIS-ALEKYLFGEKLEQVIRGL 605

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
             +      +  +  YT LL G C +G + EA I L  +    I  N  +   L+R L
Sbjct: 606 LELDFKAR-DFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIRGL 662



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 220/503 (43%), Gaps = 61/503 (12%)

Query: 36  VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDG 95
           V+N + ++G  E+AL   + I+  G       Y+ +++A     R+   +  Y+ M + G
Sbjct: 230 VLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSSLINAFFKARRYREAHAWYTKMFKQG 289

Query: 96  MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAR 155
           + P+V  Y I+++ L K  RV  A K+L EM   G  PDA  Y  ++  +C +G +  A+
Sbjct: 290 IVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQ 349

Query: 156 ELAMRFGS-GVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVG 214
            L +      V  +  LI  +CK   + EA  L  +M   G +P+V+T++T+I+ LC   
Sbjct: 350 SLRLEISEHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAN 409

Query: 215 NVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNR---MIREGFL---- 267
           N+E +  +  ++ V G   ++H   SL +G    G+  +++ L  +   M   G +    
Sbjct: 410 NLEKAKNLFCKLEV-GRRHSLH--LSLSQG---SGQVSDSARLLKKAKEMCEAGQILRAY 463

Query: 268 -----------PNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP-PNVTTYSALIDGF 315
                      P+++ Y+ L++ LC +  ++ A +    +++   P P+  TY  +I G 
Sbjct: 464 KLITDLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGL 523

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL------------- 362
                   A +++ RM   G  P +  Y  ++  LC+ +   +A +L             
Sbjct: 524 FMVDREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDN 583

Query: 363 -----IEK----------------MAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
                +EK                + F+        +   + G C  G+V  A+ +L  +
Sbjct: 584 DSISALEKYLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVL 643

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            ++    N T+   L+ GL +  R+ +A ++     + G  L  +  N +L  +  +   
Sbjct: 644 DEFNIKINATSCVHLIRGLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCLLYSRDY 703

Query: 462 VE-AFQLLGKMLIEGTKLDAITF 483
            E    L+G+M   G +L++  F
Sbjct: 704 KECVVDLIGRMESFGYRLNSEEF 726



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 6/213 (2%)

Query: 355 MFHQAHSLIEKMAFENCPPNTV-----TFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           +FH+    I   A E    N V     +    ++     G  + A++   +M+++   P+
Sbjct: 59  LFHRNWYSIYWEALELLKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPD 118

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
              YN +L  +L    ++ A  L T + K  ++ N  TYN ++ G C+ G V  A ++L 
Sbjct: 119 AHMYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLD 178

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNS 529
           +M   G     ++   I+Y  C+   V+ A +L + ++    + PD+IS   +L G C  
Sbjct: 179 EMKRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETS-YPPDMISCNVVLNGFCKM 237

Query: 530 GGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G ++EA  ++  + N+G   N  +++ L+ + F
Sbjct: 238 GRLEEALSFVWMIKNDGFSLNRNSYSSLINAFF 270



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/195 (20%), Positives = 90/195 (46%), Gaps = 11/195 (5%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
           E++      + ++ +G    + V + ++I     V   ++A K+F R+++ G +PT+ +Y
Sbjct: 492 EVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQKTGSEPTLSVY 551

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
             ++  L  +++ S    +Y    +     +  + + L K L    +++   + L+E+  
Sbjct: 552 RTLMTCLCRKSKVSRAFTLYFEHLKSLPSRDNDSISALEKYLF-GEKLEQVIRGLLELDF 610

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKI 181
           K        YT ++   C+ G+V EA        E  ++  +   V+  LI GLCKE ++
Sbjct: 611 KARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVH--LIRGLCKEQRL 668

Query: 182 EEAFWLLCEMVDRGI 196
            +A  +    +++G 
Sbjct: 669 HDAVKIFLYSLEKGF 683


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 211/441 (47%), Gaps = 38/441 (8%)

Query: 157 LAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNV 216
           L +R  S +  +N ++  L K         L  +M  +GI+ N++T S +I+  C +G +
Sbjct: 2   LLVRHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQM 61

Query: 217 ETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTL 276
             S  +LG++   G  PN  ++T+L+KG  L G   +     ++++ + F  N V+Y TL
Sbjct: 62  AFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTL 121

Query: 277 IHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAK------------------- 317
           ++GLC  G    A+ +   +E+ S  PNV  YSA+IDG  K                   
Sbjct: 122 LNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREI 181

Query: 318 ----------------AGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
                           AG L+GA  + + MI    +P+V  ++ ++  LC+      A  
Sbjct: 182 FPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQ 239

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           +   M      PN  ++N  I GLC C RVD AM LL +M     +P+  TYN L+DGL 
Sbjct: 240 IFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLC 299

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +  R+  A  L+ E+   G   ++VTY ++L  +C+   + +A  L  KM   G +    
Sbjct: 300 KSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMY 359

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+  +I   CK G++ NA +L   +   G    D+ +YT ++ G+C  G   EA     K
Sbjct: 360 TYTALIDGLCKGGRLKNAQELFQHLLVKG-CCIDVWTYTVMISGLCKEGMFDEALAIKSK 418

Query: 542 MLNEGICPNFATWNVLVRSLF 562
           M + G  PN  T+ +++RSLF
Sbjct: 419 MEDNGCIPNAVTFEIIIRSLF 439



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 240/480 (50%), Gaps = 33/480 (6%)

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           +N IL +L+    +  +  +   M   G+E N+ T +IL+   C   ++  ++ LL ++ 
Sbjct: 13  FNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKIL 72

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWL 187
             G  P+ +++TT++  +C  G+V++     + F   V                      
Sbjct: 73  KLGYXPNTITWTTLMKGLCLKGEVKKL----LHFHDKV---------------------- 106

Query: 188 LCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLL 247
               V +    N ++Y T+++ LC  G    ++ +L  +  R   PN+  +++++ G   
Sbjct: 107 ----VAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCK 162

Query: 248 GGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTT 307
               +EA DL++ M      PNV+ Y+TLI   C  G +  A S+ ++M   +  P+V T
Sbjct: 163 DKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYT 222

Query: 308 YSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMA 367
           +S LID   K G    A QI++ M+  G +PNV +Y  M+  LC+     +A +L+ +M 
Sbjct: 223 FSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREML 280

Query: 368 FENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVK 427
            +N  P+TVT+N+ I GLC  GR+  A+ L+++M       ++ TY  LLD L +   + 
Sbjct: 281 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 340

Query: 428 EAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIII 487
           +A  L  ++++ GIQ  + TY  ++ G+C+ G +  A +L   +L++G  +D  T+ ++I
Sbjct: 341 KATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMI 400

Query: 488 YAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGI 547
              CK+G  + A+ +  ++   G   P+ +++  ++  +       +A   L +M+ +G+
Sbjct: 401 SGLCKEGMFDEALAIKSKMEDNG-CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 203/425 (47%), Gaps = 7/425 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L +QM V+G+  +      +IN +  +G    +  +  +I + G  P    +  ++  L 
Sbjct: 32  LSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLC 91

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +     +   +  +     + N  +Y  LL  LCK      A KLL  + ++   P+ V
Sbjct: 92  LKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVV 151

Query: 137 SYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEM 191
            Y+ I+  +CK   V EA +L     A      V  YN LI   C   ++  AF LL EM
Sbjct: 152 MYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEM 211

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           + + I+P+V T+S +I +LC  G  + +  I   M   G NPN++S+  ++ G     R 
Sbjct: 212 ILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 269

Query: 252 HEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSAL 311
            EA +L   M+ +  +P+ V Y++LI GLC +G +  A+++  +M     P +V TY++L
Sbjct: 270 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 329

Query: 312 IDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENC 371
           +D   K  NL  A+ ++ +M   G  P +  YT ++  LC+      A  L + +  + C
Sbjct: 330 LDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 389

Query: 372 PPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFE 431
             +  T+   I GLC  G  D A+ +  +M+   C+PN  T+  ++  L   +   +A +
Sbjct: 390 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEK 449

Query: 432 LVTEI 436
           L+ E+
Sbjct: 450 LLHEM 454



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 187/364 (51%), Gaps = 7/364 (1%)

Query: 8   KCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKI 67
           K E+  + +   ++  +    ++  + +++N   + G    A+K+   I +   +P V +
Sbjct: 93  KGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVM 152

Query: 68  YNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           Y+ I+D L  +   +    +YS M    + PNV TYN L+ A C   ++ GA+ LL EM 
Sbjct: 153 YSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI 212

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIE 182
            K   PD  +++ ++ ++CK G+   A+++      M     V  YN +INGLCK  +++
Sbjct: 213 LKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 270

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
           EA  LL EM+ + + P+ +TY+++I  LC  G + ++L ++ +M  RG   ++ ++TSLL
Sbjct: 271 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 330

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCP 302
                     +A+ L+ +M   G  P +  Y+ LI GLC  G +  A  +   +    C 
Sbjct: 331 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 390

Query: 303 PNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSL 362
            +V TY+ +I G  K G    A  I ++M  NGC PN V +  +++ L + +   +A  L
Sbjct: 391 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450

Query: 363 IEKM 366
           + +M
Sbjct: 451 LHEM 454



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 148/308 (48%), Gaps = 34/308 (11%)

Query: 290 VSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKV 349
           +S+S QM+      N+ T S LI+ F   G +  +  +  +++  G  PN + +T ++K 
Sbjct: 30  ISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKG 89

Query: 350 LCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPN 409
           LC      +     +K+  +    N V++ T + GLC  G    A+KLL  ++     PN
Sbjct: 90  LCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPN 149

Query: 410 ITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLG 469
           +  Y+ ++DGL +   V EA++L +E++   I  N++TYNT++   C AG ++ AF LL 
Sbjct: 150 VVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLH 209

Query: 470 KMLIEGTKLDAITFNIIIYAYCKQGK---------------------------------V 496
           +M+++    D  TF+I+I A CK+GK                                 V
Sbjct: 210 EMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 269

Query: 497 NNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNV 556
           + A+ LL R        PD ++Y SL+ G+C SG +  A   + +M + G   +  T+  
Sbjct: 270 DEAMNLL-REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 328

Query: 557 LVRSLFSN 564
           L+ +L  N
Sbjct: 329 LLDALCKN 336



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 135/263 (51%), Gaps = 7/263 (2%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++ G   LL +M ++ ++     F  +I++  + G  + A ++F+ + + G+ P V  YN
Sbjct: 200 QLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYN 257

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            +++ L    R      +   M    M P+  TYN L+  LCK+ R+  A  L+ EM ++
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 317

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEARELAMRFGS-GVS----VYNALINGLCKEHKIEEA 184
           G   D V+YT+++ ++CK   +++A  L M+    G+      Y ALI+GLCK  +++ A
Sbjct: 318 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 377

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   ++ +G   +V TY+ +IS LC  G  + +L I  +M   GC PN  +F  +++ 
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437

Query: 245 YLLGGRTHEASDLWNRMIREGFL 267
                   +A  L + MI +G L
Sbjct: 438 LFEKDENDKAEKLLHEMIAKGLL 460



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 31/224 (13%)

Query: 8   KCE-IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVK 66
           KC+ +D    LL++M  + +      + S+I+   + G    AL +   +   G    V 
Sbjct: 265 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 324

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
            Y  +LDAL           ++  MK  G++P ++TY  L+  LCK  R+  A +L   +
Sbjct: 325 TYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 384

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFW 186
             KGC  D  +YT ++S +CK G  +EA  LA++                          
Sbjct: 385 LVKGCCIDVWTYTVMISGLCKEGMFDEA--LAIK-------------------------- 416

Query: 187 LLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG 230
              +M D G  PN +T+  II SL +    + +  +L +M  +G
Sbjct: 417 --SKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 80/157 (50%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I+ L +   I     L+ +M   G       + S++++  +    ++A  +F +++E G
Sbjct: 294 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 353

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++PT+  Y  ++D L    R      ++ ++   G   +V+TY +++  LCK    D A 
Sbjct: 354 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 413

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL 157
            +  +M + GC P+AV++  I+ S+ +  + ++A +L
Sbjct: 414 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 62/130 (47%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +   +D    L  +MK  G+  +   + ++I+   + G  + A ++F  +   G
Sbjct: 329 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 388

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
               V  Y  ++  L  E  F     I S M+ +G  PN  T+ I++++L + +  D A 
Sbjct: 389 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 448

Query: 121 KLLVEMGNKG 130
           KLL EM  KG
Sbjct: 449 KLLHEMIAKG 458


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 230/442 (52%), Gaps = 15/442 (3%)

Query: 49  ALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLK 108
           +L+++ R++   L  +    + +L AL +   F++    +++M R  +     T+NI+L+
Sbjct: 67  SLRLYSRMKSLSLPISTASLHPLLSALPSAPAFAL----FADMFRLRLPLCTTTFNIMLR 122

Query: 109 ALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGVS 166
            LC   +   A +LL +M      P+AV+Y T+++  C  G+V+ A ++   MR   G++
Sbjct: 123 HLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 178

Query: 167 ----VYNALINGLCKEHKIEEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLG 221
                Y  +I+G CK  +++EA  +  EM+ +G + P  + Y+ +I   CD G ++T+L 
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 238

Query: 222 ILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLC 281
              +M  RG    + ++  L+    + GR  EA +L   M  +G  P+V  Y+ LI+G C
Sbjct: 239 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 298

Query: 282 SNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVV 341
             G++ +A+ +   M        V TY+ALI   +K G +    ++++  +  G  P++V
Sbjct: 299 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 358

Query: 342 AYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQM 401
            Y  ++     +    +A  ++ +M  +   P+ VT+NT ++GLC  GRVD A KL+D+M
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM 418

Query: 402 KQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMV 461
            +    P++ TYN L+ G      VK+A  +  E+   G    ++TYN ++ G+C+ G  
Sbjct: 419 TERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQG 478

Query: 462 VEAFQLLGKMLIEGTKLDAITF 483
            +A  ++ +M+  G   D  T+
Sbjct: 479 DDAENMVKEMVENGITPDDSTY 500



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 205/399 (51%), Gaps = 7/399 (1%)

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
            + +N ++  LC   K   A  LL +M      PN +TY+T+I+  C  G V+ +L I+ 
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 225 QMFVRG-CNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFL-PNVVAYSTLIHGLCS 282
           +M  RG   PN +++ +++ G+   GR  EA  +++ M+ +G + P  V Y+ LI G C 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 283 NGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVA 342
            G +D A+    +M E      V TY+ L+      G    A ++   M   G +P+V  
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 343 YTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMK 402
           Y  ++   C+     +A  + E M+        VT+   I  L   G+V    KL D+  
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 403 QYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
           +    P++  YN L++       +  AFE++ E+EK  I  + VTYNT++ G+C  G V 
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           EA +L+ +M   G + D +T+N +I  Y  +G V +A+++ + +   G +NP +++Y +L
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG-FNPTLLTYNAL 468

Query: 523 LWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + G+C +G   +A   +++M+  GI P+ +T+  L+  L
Sbjct: 469 IQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 191/383 (49%), Gaps = 7/383 (1%)

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           AF L  +M    +     T++ ++  LC  G    +L +L QM      PN  ++ +++ 
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIA 153

Query: 244 GYLLGGRTHEASDLWNRMI-REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQM-EENSC 301
           G+   GR   A D+   M  R G  PN   Y T+I G C  G +DEAV V  +M  +   
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213

Query: 302 PPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHS 361
            P    Y+ALI G+   G L  A    +RM+  G +  V  Y  +V  L  +    +A+ 
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L+E+M  +   P+  T+N  I G C  G V  A+++ + M +      + TY  L+  L 
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAI 481
           +  +V+E  +L  E  + GI+ ++V YN +++    +G +  AF+++G+M  +    D +
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 393

Query: 482 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 541
           T+N ++   C  G+V+ A +L+D +   G   PD+++Y +L+ G    G +++A     +
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTERG-IQPDLVTYNTLISGYSMKGDVKDALRIRNE 452

Query: 542 MLNEGICPNFATWNVLVRSLFSN 564
           M+N+G  P   T+N L++ L  N
Sbjct: 453 MMNKGFNPTLLTYNALIQGLCKN 475



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 169/312 (54%), Gaps = 6/312 (1%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGV-FISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIY 68
            +D    +  +M  +G    E V + ++I  Y   G  + AL    R+ E G+  TV  Y
Sbjct: 196 RVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATY 255

Query: 69  NHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGN 128
           N ++ AL  + R +    +   M   G+ P+VFTYNIL+   CK   V  A ++   M  
Sbjct: 256 NLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315

Query: 129 KGCAPDAVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEE 183
           +G     V+YT ++ ++ K GQV+E  +L   A+R G    + +YNALIN       I+ 
Sbjct: 316 RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR 375

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           AF ++ EM  + I P+ +TY+T++  LC +G V+ +  ++ +M  RG  P++ ++ +L+ 
Sbjct: 376 AFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLIS 435

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
           GY + G   +A  + N M+ +GF P ++ Y+ LI GLC NG  D+A ++  +M EN   P
Sbjct: 436 GYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITP 495

Query: 304 NVTTYSALIDGF 315
           + +TY +LI+G 
Sbjct: 496 DDSTYISLIEGL 507



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 184/345 (53%), Gaps = 7/345 (2%)

Query: 17  LLQQMKVEG-VSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIYNHILDA 74
           ++++M+  G ++ ++  + +VI+ + +VG  ++A+K+F  +   G +KP   +YN ++  
Sbjct: 167 IMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGG 226

Query: 75  LLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPD 134
              + +          M   G+   V TYN+L+ AL  + R   AY+L+ EMG KG APD
Sbjct: 227 YCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPD 286

Query: 135 AVSYTTIVSSICKLGQVEEAREL---AMRFG--SGVSVYNALINGLCKEHKIEEAFWLLC 189
             +Y  +++  CK G V++A E+     R G  + V  Y ALI  L K+ +++E   L  
Sbjct: 287 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD 346

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           E V RGI P+++ Y+ +I+S    GN++ +  I+G+M  +   P+  ++ +L++G  L G
Sbjct: 347 EAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLG 406

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
           R  EA  L + M   G  P++V Y+TLI G    G + +A+ +  +M      P + TY+
Sbjct: 407 RVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYN 466

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           ALI G  K G    A  +   M+ NG +P+   Y  +++ L   +
Sbjct: 467 ALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED 511



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 9/202 (4%)

Query: 362 LIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           L  +M   + P +T + +  +  L        A  L   M +       TT+N +L  L 
Sbjct: 70  LYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLC 125

Query: 422 RVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEG-TKLDA 480
              +   A EL+ ++ +     N VTYNT++ G C  G V  A  ++ +M   G    + 
Sbjct: 126 SAGKPARALELLRQMPRP----NAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 181

Query: 481 ITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQ 540
            T+  +I  +CK G+V+ A+++ D +   GE  P+ + Y +L+ G C+ G +  A +Y  
Sbjct: 182 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 241

Query: 541 KMLNEGICPNFATWNVLVRSLF 562
           +M+  G+    AT+N+LV +LF
Sbjct: 242 RMVERGVAMTVATYNLLVHALF 263



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I  L +K ++     L  +    G+     ++ ++INS+   G  ++A ++   + +  
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           + P    YN ++  L    R      +   M   G++P++ TYN L+        V  A 
Sbjct: 388 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDAL 447

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGV----SVYNALINGL 175
           ++  EM NKG  P  ++Y  ++  +CK GQ ++A  +      +G+    S Y +LI GL
Sbjct: 448 RIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507

Query: 176 CKEHK 180
             E +
Sbjct: 508 TTEDE 512


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 230/463 (49%), Gaps = 49/463 (10%)

Query: 106 LLKALCKNNRVDGA--YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVE---EARELAMR 160
           LL +  KN     +  +  L  +G+ GCA +++    +V +  K G+++   E  + A  
Sbjct: 129 LLDSFAKNAHYSNSTIFHSLSVLGSWGCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGD 187

Query: 161 FGSGVSVY--NALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
           +G  +S    N ++  L KE +I     +  EM+ R I  NV+T+  +I+ LC V     
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKV----- 242

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
                                         G+  +A D+   M   GF P+V+ Y+T+I 
Sbjct: 243 ------------------------------GKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
           G C  G M +A ++  +M      PN  T++ LIDGF +  N+  A +++  M   G  P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           NVV Y  ++  LC N    +A  L +KM+     PN VT+N  I G C    +  A ++L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           D + +    PN+ T+N L+D   +  R+ +AF L + +   G+  N+ TYN ++ G CR 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI----RGGGEWNP 514
           G V EA +L  +M   G K D +T+NI++ A CK+G+   A++LLD +    + G   N 
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRAN- 511

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVL 557
            I++Y  L+ G CN G ++EA   L +ML +G+ PN  T+++L
Sbjct: 512 -IVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 217/403 (53%), Gaps = 9/403 (2%)

Query: 28  CSEGVFIS-VINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           C+  + +  ++ +Y + G  + AL+ F R  ++G + +    N +L +L+ E R  ++  
Sbjct: 156 CANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVES 215

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           +Y  M R  +  NV T+++++  LCK  +   A  ++ +M   G +P  ++Y TI+   C
Sbjct: 216 VYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYC 275

Query: 147 KLGQVEEAREL-----AMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K G++ +A  L     A R       +N LI+G C++  +  A  +  EM  +G+ PNV+
Sbjct: 276 KAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVV 335

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+++I+ LC  G ++ +LG+  +M   G  PN+ ++ +L+ G+       EA ++ + +
Sbjct: 336 TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
            + G  PNV+ ++TLI      G MD+A  +   M +    PNV+TY+ LI GF + GN+
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF---ENCPPNTVTF 378
             A ++   M  NG   ++V Y  +V  LC+     +A  L+++M     +    N VT+
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTY 515

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL 421
           N  IKG C  G+++ A +LL++M +   +PN TTY+ L D ++
Sbjct: 516 NVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMM 558



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 8/351 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+  L ++  I  V+ + ++M    +  +   F  VIN   +VG  ++A  +   ++ +G
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P+V  YN I+D      +    + +   M    + PN  T+NIL+   C++  V  A 
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEAREL-----AMRFGSGVSVYNALINGL 175
           K+  EM  +G  P+ V+Y ++++ +C  G+++EA  L      M     V  YNALING 
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK+  ++EA  +L ++  RG+ PNVIT++T+I +    G ++ +  +   M   G  PN+
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            ++  L+ G+   G   EA  L   M   G   ++V Y+ L+  LC  G   +AV +  +
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 296 ---MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAY 343
              ME+     N+ TY+ LI GF   G L  A+++ N M+  G  PN   Y
Sbjct: 500 MTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 181/359 (50%), Gaps = 5/359 (1%)

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           SL +LG     GC  +I     L+  Y+  G    A + ++R    GF  + ++ + ++ 
Sbjct: 147 SLSVLGSW---GCANSI-IVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLV 202

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
            L   G +    SV  +M       NV T+  +I+G  K G    A  +   M + G SP
Sbjct: 203 SLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSP 262

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           +V+ Y  ++   C+     +A +L+++M  +   PN +TFN  I G C    V  A K+ 
Sbjct: 263 SVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVF 322

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
           ++M++    PN+ TYN L++GL    ++ EA  L  ++   G++ N+VTYN +++G C+ 
Sbjct: 323 EEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK 382

Query: 459 GMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIIS 518
            M+ EA ++L  +   G   + ITFN +I AY K G++++A  L   +   G   P++ +
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC-PNVST 441

Query: 519 YTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           Y  L+ G C  G ++EA    ++M   G+  +  T+N+LV +L         V +LD++
Sbjct: 442 YNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 155/311 (49%), Gaps = 8/311 (2%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           +++ MK  G S S   + ++I+ Y + G   +A  +   +    + P    +N ++D   
Sbjct: 251 VVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFC 310

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
            +   +    ++  M+R G++PNV TYN L+  LC N ++D A  L  +M   G  P+ V
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVV 370

Query: 137 SYTTIVSSICKLGQVEEARELAMRFGS-----GVSVYNALINGLCKEHKIEEAFWLLCEM 191
           +Y  +++  CK   ++EARE+    G       V  +N LI+   K  ++++AF L   M
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 192 VDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRT 251
           +D G+ PNV TY+ +I   C  GNV+ +  +  +M   G   ++ ++  L+      G T
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 252 HEASDLWNRMI---REGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTY 308
            +A  L + M    ++G   N+V Y+ LI G C+ G ++EA  +  +M E    PN TTY
Sbjct: 491 RKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 550

Query: 309 SALIDGFAKAG 319
             L D   + G
Sbjct: 551 DILRDEMMEKG 561



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 17/320 (5%)

Query: 260 RMIREGFLPNV-VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
           R + + F  N   + ST+ H L   GS   A S+   M   +   N     AL +GF +A
Sbjct: 127 RALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLAL-EGFDRA 185

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
           G+         R+ +  C+P +V+       L +        S+ ++M       N VTF
Sbjct: 186 GDY------GFRLSALSCNPMLVS-------LVKEGRIGVVESVYKEMIRRRIGVNVVTF 232

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
           +  I GLC  G+   A  +++ MK +   P++ TYN ++DG  +  ++ +A  L+ E+  
Sbjct: 233 DVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVA 292

Query: 439 CGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
             I  N +T+N ++ G CR   V  A ++  +M  +G + + +T+N +I   C  GK++ 
Sbjct: 293 KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDE 352

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A+ L D++ G G   P++++Y +L+ G C    ++EA   L  +   G+ PN  T+N L+
Sbjct: 353 ALGLQDKMSGMG-LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411

Query: 559 RSLFSNLGHLGPVYILDDIM 578
            + +   G +   ++L  +M
Sbjct: 412 DA-YGKAGRMDDAFLLRSMM 430



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 134/268 (50%), Gaps = 24/268 (8%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +   + + ++M+ +G+  +   + S+IN     G  ++AL +  ++   GLKP V  YN 
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +++    +        +  ++ + G+ PNV T+N L+ A  K  R+D A+ L   M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 131 CAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGLCKEHKIEEAF 185
             P+  +Y  ++   C+ G V+EAR+LA    G+G+      YN L++ LCK+ +  +A 
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 186 WLLCEMV---DRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLL 242
            LL EM     +G   N++TY+ +I   C+ G +E +  +L +M  +G  PN  ++    
Sbjct: 495 RLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI-- 552

Query: 243 KGYLLGGRTHEASDLWNRMIREGFLPNV 270
                         L + M+ +GF+P++
Sbjct: 553 --------------LRDEMMEKGFIPDI 566


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 239/463 (51%), Gaps = 6/463 (1%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           ++ S+IN++ +  L ++AL  F  + + GL     I+N +L +L+  N F      ++ +
Sbjct: 95  LYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNEL 154

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K + ++ +V+++ I++K  C+N  +D +++LL  + + G +P+ V YTT++   CK G +
Sbjct: 155 K-ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDI 213

Query: 152 EEARELAMRFG-----SGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           E AR    + G     +    +  LINGL K+   ++ F L  +M   G+ PN+ TY+ +
Sbjct: 214 ERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCL 273

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           ++  C  G +  +  +  +M  RG   N+ ++ +L+ G     R  EA  L ++M +   
Sbjct: 274 MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAV 333

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
            PN++ Y+TLI G C  G++D+A S+  Q++ N   P++ TY+ LI+G++KAGN  G + 
Sbjct: 334 SPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVAD 393

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           +   M   G SP+ V  T ++    +     +A  +   M      P+   +   I GLC
Sbjct: 394 LAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLC 453

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G +  + KL   M +    P+   YN ++ G  + +    A  L+ E+E  G+  N+ 
Sbjct: 454 MKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVA 513

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
           +Y++I+  +C+ G   EA  LL KM+    K  A   N+I  A
Sbjct: 514 SYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 232/465 (49%), Gaps = 11/465 (2%)

Query: 103 YNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA----RELA 158
           Y  ++ A  K+  +D A     EM +KG       + +++ S+ +    E+A     EL 
Sbjct: 96  YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155

Query: 159 MRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVET 218
            R    V  +  +I G C+   ++++F LL  + D G+ PNV+ Y+T+I   C  G++E 
Sbjct: 156 ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIER 215

Query: 219 SLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH 278
           +     +M   G   N ++FT L+ G    G   +  DL+ +M   G  PN+  Y+ L++
Sbjct: 216 ARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMN 275

Query: 279 GLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSP 338
             C  G +  A  +  +M E     NV TY+ LI G  +   +  A ++ ++M     SP
Sbjct: 276 EYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335

Query: 339 NVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
           N++ Y  ++   C      +A SL++++      P+ VT+N  I+G    G       L 
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395

Query: 399 DQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRA 458
            +M+     P+  T   L+D  +R+  +++AF++ + +EK G+  ++  Y  ++HG+C  
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455

Query: 459 GMVVEA---FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPD 515
           G + E+   F+ +G+M +E +    + +N +I+ YCK+     A++LL  +   G   P+
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSD---VIYNTMIHGYCKEDNSYRALRLLREMEAKG-LVPN 511

Query: 516 IISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
           + SY+S++  +C  G  +EA + L KM+   + P+ +  N++ ++
Sbjct: 512 VASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 193/389 (49%), Gaps = 5/389 (1%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI+   E   +D    LL  ++  G+S +  ++ ++I+   + G  E+A   F ++ E G
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMG 227

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           L      +  +++ L  +        ++  MK +G+ PN++TYN L+   C   ++  A+
Sbjct: 228 LVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAF 287

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-GSGVS----VYNALINGL 175
            L  EM  +G   + V+Y T++  +C+  +V EA +L  +   + VS     YN LI G 
Sbjct: 288 DLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGF 347

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           C    +++A  LL ++   G+ P+++TY+ +I      GN +    +  +M  RG +P+ 
Sbjct: 348 CDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSK 407

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
            + T L+  Y+      +A  +++ M + G +P+V  Y  LIHGLC  G+M E+  +   
Sbjct: 408 VTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRS 467

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           M E    P+   Y+ +I G+ K  N   A ++   M + G  PNV +Y+ ++ VLC++  
Sbjct: 468 MGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGK 527

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
           + +A  L++KM      P+    N   K 
Sbjct: 528 WEEAEVLLDKMIELQLKPSASILNMISKA 556



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 219/476 (46%), Gaps = 48/476 (10%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVE-MGNKGCAPDAVSYTTIVSSI 145
           ++++  + G +    + + LL+ L  ++++  A  L+++ + NK  +P    + T+ S +
Sbjct: 24  LFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSP----FFTVPSLL 79

Query: 146 CKLGQVEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             L Q +          +   +Y ++IN   K   +++A     EMVD+G+         
Sbjct: 80  HHLTQNQNPSM------TTALLYESIINAHLKSQLLDKALIFFNEMVDKGL--------- 124

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
                               +F     PNI  F SLL G L+     E + L+   ++E 
Sbjct: 125 --------------------VF----RPNI--FNSLL-GSLVRSNCFEKAWLFFNELKER 157

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGAS 325
              +V ++  +I G C NG++D++  +   +++    PNV  Y+ LIDG  K G++  A 
Sbjct: 158 VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERAR 217

Query: 326 QIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGL 385
             +++M   G   N   +T ++  L +  +      L EKM      PN  T+N  +   
Sbjct: 218 LFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEY 277

Query: 386 CGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNI 445
           CG G++  A  L D+M++     N+ TYN L+ G+ R  RV EA +LV +++K  +  N+
Sbjct: 278 CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337

Query: 446 VTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDR 505
           +TYNT++ G C  G + +A  LL ++   G     +T+NI+I  Y K G       L   
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE 397

Query: 506 IRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           + G G  +P  ++ T L+        M++AF     M   G+ P+   + VL+  L
Sbjct: 398 MEGRG-ISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGL 452



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 82/158 (51%), Gaps = 5/158 (3%)

Query: 408 PNITT---YNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEA 464
           P++TT   Y  +++  L+   + +A     E+   G+      +N++L  + R+    +A
Sbjct: 88  PSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKA 147

Query: 465 FQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLW 524
           +    + L E  K D  +F I+I   C+ G ++ + QLL  ++  G  +P+++ YT+L+ 
Sbjct: 148 WLFFNE-LKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMG-LSPNVVIYTTLID 205

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G C +G ++ A ++  KM   G+  N  T+ VL+  LF
Sbjct: 206 GCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLF 243


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 207/403 (51%), Gaps = 9/403 (2%)

Query: 4   KLGEKCEIDGVQYLLQQMK--VEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGL 61
           KL      D V+ L+  ++     + C E +FI ++ +Y   G  E ++++F RI +FG+
Sbjct: 90  KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGV 149

Query: 62  KPTVKIYNHILDALLAENRFSMINPIYSNMKRD-GMEPNVFTYNILLKALCKNNRVDGAY 120
           K +V+  N +L+ L+   RF +++ ++ N K   G+ PN+FT N+L+KALCK N ++ AY
Sbjct: 150 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 209

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARE-----LAMRFGSGVSVYNALINGL 175
           K+L E+   G  P+ V+YTTI+      G +E A+      L   +      Y  L++G 
Sbjct: 210 KVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGY 269

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CK  +  EA  ++ +M    I+PN +TY  +I +LC       +  +  +M  R   P+ 
Sbjct: 270 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDS 329

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQ 295
                ++       +  EA  LW +M++   +P+    STLIH LC  G + EA  +  +
Sbjct: 330 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDE 389

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
            ++ S  P++ TY+ LI G  + G L  A ++W+ M    C PN   Y  +++ L +N  
Sbjct: 390 FDKGSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGN 448

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLL 398
             +   ++E+M    C PN  TF    +GL   G+ + A+K++
Sbjct: 449 VKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIV 491



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 212/463 (45%), Gaps = 27/463 (5%)

Query: 62  KPTVKIYNHILDALLAENRFSMINP-----------IYSNMKRDGMEPNVFTYNILLKAL 110
           KPT+K +      L  +   SMI             +Y+     G   N  TY+ +L  L
Sbjct: 35  KPTIKPWPQ---RLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKL 91

Query: 111 CKNNRVDGAYKLLVEMGNK----GCAPDAVSYTTIVSSICKLGQVEEARELAMR---FGS 163
            +    D    L+ ++ N      C  +   +  ++ +    G+ E +  + +R   FG 
Sbjct: 92  SRARAFDPVESLMADLRNSYPPIKCGENL--FIDLLRNYGLAGRYESSMRIFLRIPDFGV 149

Query: 164 GVSV--YNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTIISSLCDVGNVETSL 220
             SV   N L+N L +  + +    +     +  GI PN+ T + ++ +LC   ++E++ 
Sbjct: 150 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 209

Query: 221 GILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGL 280
            +L ++   G  PN+ ++T++L GY+  G    A  +   M+  G+ P+ + Y+ L+ G 
Sbjct: 210 KVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGY 269

Query: 281 CSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNV 340
           C  G   EA +V   ME+N   PN  TY  +I    K      A  +++ M+     P+ 
Sbjct: 270 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDS 329

Query: 341 VAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQ 400
                ++  LC+++   +A  L  KM   NC P+    +T I  LC  GRV  A KL D+
Sbjct: 330 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDE 389

Query: 401 MKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGM 460
             +   +P++ TYN L+ G+     + EA  L  ++ +   + N  TYN ++ G+ + G 
Sbjct: 390 FDK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGN 448

Query: 461 VVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL 503
           V E  ++L +ML  G   +  TF I+     K GK  +AI+++
Sbjct: 449 VKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIV 491



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 147/297 (49%), Gaps = 6/297 (2%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +K +I+    +L ++   G+  +   + +++  Y   G  E A ++   + + G
Sbjct: 195 LVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRG 254

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
             P    Y  ++D      RFS    +  +M+++ +EPN  TY ++++ALCK  +   A 
Sbjct: 255 WYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 314

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-----RELAMRFGSGVSVYNALINGL 175
            +  EM ++   PD+     ++ ++C+  +V+EA     + L        ++ + LI+ L
Sbjct: 315 NMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 374

Query: 176 CKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI 235
           CKE ++ EA  L  E  D+G  P+++TY+T+I+ +C+ G +  +  +   MF R C PN 
Sbjct: 375 CKEGRVSEARKLFDEF-DKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNA 433

Query: 236 HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
            ++  L++G    G   E   +   M+  G  PN   +  L  GL   G  ++A+ +
Sbjct: 434 FTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKI 490



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 171/391 (43%), Gaps = 9/391 (2%)

Query: 195 GIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHS----FTSLLKGYLLGGR 250
           G   N  TY +I+  L      +    ++  +  R   P I      F  LL+ Y L GR
Sbjct: 76  GFTHNYDTYHSILFKLSRARAFDPVESLMADL--RNSYPPIKCGENLFIDLLRNYGLAGR 133

Query: 251 THEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN-SCPPNVTTYS 309
              +  ++ R+   G   +V + +TL++ L  N   D   ++    +E+    PN+ T +
Sbjct: 134 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 193

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
            L+    K  ++  A ++ + + + G  PN+V YT ++           A  ++E+M   
Sbjct: 194 LLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 253

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
              P+ +T+   + G C  GR   A  ++D M++ E  PN  TY  ++  L +  +  EA
Sbjct: 254 GWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEA 313

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             +  E+       +      ++  +C    V EA  L  KML      D    + +I+ 
Sbjct: 314 RNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHW 373

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICP 549
            CK+G+V+ A +L D    G    P +++Y +L+ G+C  G + EA      M      P
Sbjct: 374 LCKEGRVSEARKLFDEFDKGS--IPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKP 431

Query: 550 NFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
           N  T+NVL+  L  N      V +L++++ +
Sbjct: 432 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLES 462



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 19/325 (5%)

Query: 242 LKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSC 301
           L+ +L  G++H            GF  N   Y +++  L    + D   S+   +  NS 
Sbjct: 64  LQIFLYAGKSHP-----------GFTHNYDTYHSILFKLSRARAFDPVESLMADLR-NSY 111

Query: 302 PP---NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQ 358
           PP       +  L+  +  AG    + +I+ R+   G   +V +   ++ VL QN  F  
Sbjct: 112 PPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDL 171

Query: 359 AHSLIE--KMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
            H++ +  K +F    PN  T N  +K LC    ++ A K+LD++     +PN+ TY  +
Sbjct: 172 VHAMFKNSKESF-GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTI 230

Query: 417 LDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGT 476
           L G +    ++ A  ++ E+   G   + +TY  ++ G C+ G   EA  ++  M     
Sbjct: 231 LGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEI 290

Query: 477 KLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAF 536
           + + +T+ ++I A CK+ K   A  + D +     + PD      ++  +C    + EA 
Sbjct: 291 EPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRS-FMPDSSLCCKVIDALCEDHKVDEAC 349

Query: 537 IYLQKMLNEGICPNFATWNVLVRSL 561
              +KML     P+ A  + L+  L
Sbjct: 350 GLWRKMLKNNCMPDNALLSTLIHWL 374


>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
 gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
          Length = 800

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/546 (25%), Positives = 259/546 (47%), Gaps = 16/546 (2%)

Query: 32  VFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSNM 91
           V+ +++ SY   G+ ++A+   ++I+  G  P +  +N++++ L+A  +      IY  +
Sbjct: 166 VYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQL 225

Query: 92  KRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQV 151
           K  G+ PN +TY+I++KA C+   +  A  +  EM   G  P+A +YTT +  +C   + 
Sbjct: 226 KSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRS 285

Query: 152 EEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTI 206
           +   ++   +  G     V  Y A+I G C E K++ A  +L +M  + +  +   YS +
Sbjct: 286 DFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSEL 345

Query: 207 ISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
           I   C  G++  +L +   M  +G   N    +++L+ +   G   +  + + R      
Sbjct: 346 IRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRI 405

Query: 267 LPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQ 326
             + V+Y+ ++  LC    +D+AV++  +M+      ++  Y+ LI+G+   G L+ A +
Sbjct: 406 FLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFR 465

Query: 327 IWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLC 386
           ++  M   G  P+VV +  ++    +  + ++A  L E M  ++  PN +T N  I+GLC
Sbjct: 466 VFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLC 525

Query: 387 GCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIV 446
             G+V  A      M+      +I  Y  ++ G       ++A EL  E+ + G+ ++  
Sbjct: 526 IGGKVTEAEAFFCNMED----KSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRG 581

Query: 447 TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
               +L  +C  G    A  LL  ML    +     +  +I A  + G + NA  + D +
Sbjct: 582 YIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDIL 641

Query: 507 RGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLG 566
           R  G   PDI +YT+++   C    + EA    Q M + GI P+  T+ VL+       G
Sbjct: 642 RKSG-LTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLD------G 694

Query: 567 HLGPVY 572
           HL  V+
Sbjct: 695 HLKRVH 700



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 240/488 (49%), Gaps = 18/488 (3%)

Query: 69  NHILDALL-AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLL---- 123
           + I+D L   +N+  +   I+S++K     P++  Y  +++ LC      G +K+L    
Sbjct: 67  HKIVDTLYNLKNQPHLAFSIFSHLK----NPDIPAYAAIIRILCHW----GLHKMLHSIF 118

Query: 124 --VEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG--VSVYNALINGLCKEH 179
             +   N       +S+     S+     ++  +E  ++  S   + VY+AL+       
Sbjct: 119 LHLHQNNNDFTSFDISHLLDTLSLPHHIDIDLEKEDTVKHRSSFLIQVYDALVKSYVTAG 178

Query: 180 KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFT 239
            ++EA   L ++  RG  P++ T++ +++ L   G V+ +L I  Q+   G NPN ++++
Sbjct: 179 MLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYS 238

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            ++K +   G   EAS+++  M   G +PN  AY+T I GLC+N   D    V    +E 
Sbjct: 239 IIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEG 298

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           + P +V  Y A+I GF     +  A  +   M       +   Y+ +++  C+     +A
Sbjct: 299 NIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKA 358

Query: 360 HSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDG 419
            +L   M  +    N V  +T ++  C  G     ++   + K      +  +YN ++D 
Sbjct: 359 LALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDA 418

Query: 420 LLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLD 479
           L ++ +V +A  L+ E++   + ++I+ Y T+++G C  G +V+AF++  +M  +G + D
Sbjct: 419 LCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPD 478

Query: 480 AITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYL 539
            +TFNI++ A+ ++G  N A++L + ++   +  P+ I++  ++ G+C  G + EA  + 
Sbjct: 479 VVTFNILLAAFSRRGLANEALKLYEYMK-SQDLKPNAITHNVMIEGLCIGGKVTEAEAFF 537

Query: 540 QKMLNEGI 547
             M ++ I
Sbjct: 538 CNMEDKSI 545



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 135/595 (22%), Positives = 248/595 (41%), Gaps = 62/595 (10%)

Query: 18  LQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLA 77
           L Q+K  G       F  ++N     G  + AL ++ +++  GL P    Y+ I+ A   
Sbjct: 187 LFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCR 246

Query: 78  ENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVS 137
           +      + ++  M+  G+ PN + Y   ++ LC N R D  Y++L          D  +
Sbjct: 247 KGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYA 306

Query: 138 YTTIVSSIC---KLGQVE------EARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLL 188
           Y  ++   C   K+ + E      E +EL     S    Y+ LI G CK   + +A  L 
Sbjct: 307 YVAVIRGFCNEMKMDRAEVVLGDMEKQELI----SDARCYSELIRGYCKAGDLSKALALH 362

Query: 189 CEMVDRGIDPNVITYSTI-----------------------------------ISSLCDV 213
            +M  +GI  N +  STI                                   + +LC +
Sbjct: 363 NDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKL 422

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAY 273
             V+ ++ +L +M  +  + +I  +T+L+ GY   G+  +A  ++  M  +G  P+VV +
Sbjct: 423 EKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTF 482

Query: 274 STLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMIS 333
           + L+      G  +EA+ +   M+     PN  T++ +I+G    G +  A   +     
Sbjct: 483 NILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFF----C 538

Query: 334 NGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDW 393
           N    ++  Y  M+   C+     +A  L  +++      +       ++ LC  G  D 
Sbjct: 539 NMEDKSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDR 598

Query: 394 AMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILH 453
           A+ LL  M      P+   Y +++    R   ++ A  +   + K G+  +I TY T+++
Sbjct: 599 ALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMIN 658

Query: 454 GVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ----------GKVNNAIQLL 503
             CR   + EA  L   M   G K D +TF +++  + K+           +VN A   +
Sbjct: 659 VCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNI 718

Query: 504 DRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
            +     E  PD+I YT+L+ G C    +++A     +M+  G+ P+ AT   L+
Sbjct: 719 WKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALL 773



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 211/464 (45%), Gaps = 21/464 (4%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYN 69
           ++D  + +L  M+ + +      +  +I  Y + G   +AL +   +   G+K    I +
Sbjct: 319 KMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVS 378

Query: 70  HILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
            IL     +   S +   +   K   +  +  +YNI++ ALCK  +VD A  LL EM  K
Sbjct: 379 TILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGK 438

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALINGLCKEHKIEEA 184
               D + YTT+++  C +G++ +A R      G G    V  +N L+    +     EA
Sbjct: 439 QMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNILLAAFSRRGLANEA 498

Query: 185 FWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKG 244
             L   M  + + PN IT++ +I  LC  G V  +      M     + +I ++ +++ G
Sbjct: 499 LKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNME----DKSIDNYGAMITG 554

Query: 245 YLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPN 304
           Y     T +AS+L+  +   G L +      L+  LC  G  D A+ +   M + +  P+
Sbjct: 555 YCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPS 614

Query: 305 VTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIE 364
              Y  +I    +AG++  A  +++ +  +G +P++  YT M+ V C+ N   +A +L +
Sbjct: 615 KDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQ 674

Query: 365 KMAFENCPPNTVTFNTFIKG-LCGCGRVDWAMK----------LLDQMKQYECLPNITTY 413
            M      P+ VTF   + G L       +A K          +  +M+  E  P++  Y
Sbjct: 675 DMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEVNLAASNIWKEMQNTEIRPDVICY 734

Query: 414 NELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCR 457
             L+DG  +V+R+++A  L  E+   G++ +  T   +L G CR
Sbjct: 735 TALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSG-CR 777



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 156/342 (45%), Gaps = 19/342 (5%)

Query: 87  IYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
           ++  M+  G+EP+V T+NILL A  +    + A KL   M ++   P+A+++  ++  +C
Sbjct: 466 VFEEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLC 525

Query: 147 KLGQVEEARELAMRF-GSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYST 205
             G+V EA           +  Y A+I G C+    E+A  L  E+ +RG+  +      
Sbjct: 526 IGGKVTEAEAFFCNMEDKSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYK 585

Query: 206 IISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG 265
           ++  LC+ G  + +L +L  M      P+   +  ++      G    A  +++ + + G
Sbjct: 586 LLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSG 645

Query: 266 FLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDG---------FA 316
             P++  Y+T+I+  C    + EA ++   M+     P++ T++ L+DG         FA
Sbjct: 646 LTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFA 705

Query: 317 KAGNL--LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPN 374
           +      L AS IW  M +    P+V+ YT ++   C+ +    A  L ++M +    P+
Sbjct: 706 RKRKEVNLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPD 765

Query: 375 TVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNEL 416
             T    + G    G VD  +  L+       L N+T+  E+
Sbjct: 766 RATCTALLSGCRNRGDVDMVLTKLN-------LINLTSVKEM 800



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 19/244 (7%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           MI    E    +    L  ++   G+    G    ++      G  ++AL +   + +  
Sbjct: 551 MITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLN 610

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P+  +Y  ++ A            ++  +++ G+ P++FTY  ++   C+ NR+  A 
Sbjct: 611 MEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEAR 670

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L  +M ++G  PD V++T ++    K    E        F       N   + + K   
Sbjct: 671 NLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEA-------FARKRKEVNLAASNIWK--- 720

Query: 181 IEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTS 240
                    EM +  I P+VI Y+ +I   C V  +E ++G+  +M  RG  P+  + T+
Sbjct: 721 ---------EMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTA 771

Query: 241 LLKG 244
           LL G
Sbjct: 772 LLSG 775


>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
 gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/481 (30%), Positives = 241/481 (50%), Gaps = 47/481 (9%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +I +L      + V+ LL +++  G++CSE +FI+VI SY      + ALK F RI+ FG
Sbjct: 92  IIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFG 151

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMK-RDGMEPNVFTYNILLKALCKNNRVDGA 119
           ++ +V+  N +L+AL+  NRFS ++ ++   K + G+ PNVFT NIL+KALCK N V+GA
Sbjct: 152 VRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGA 211

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEA-RELAMRFGSG----VSVYNALING 174
            K+  EM + G  P+ V+YTTI+      G +  A R     F  G     + Y  L++G
Sbjct: 212 RKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDG 271

Query: 175 LCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPN 234
             K+ +  +A  ++ EM + G++PN ITY  II   C       +L +L  M  +   PN
Sbjct: 272 YVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPN 331

Query: 235 IHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSY 294
                 ++      GR  EA  +W +++++   P+    STLIH LC  G++ EA  +  
Sbjct: 332 SALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFN 391

Query: 295 QMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNN 354
           + E  +   ++ TY+ LI G  + G L  A+++W+ M+  GC PN   Y           
Sbjct: 392 EFERGTI-SSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTY----------- 439

Query: 355 MFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYN 414
                                   N  IKG    G+    +K++++M    CL N +TY 
Sbjct: 440 ------------------------NMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYL 475

Query: 415 ELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTIL-HGVCRAGMVVEAFQLLGKMLI 473
            L++GLL++ + +E   +++ I   G  ++   +N  + H V     V E   +L K+LI
Sbjct: 476 ILVEGLLKLGKREELLNILSMIISSG-AVDFKAWNLFVPHFVSN---VNEQANILEKILI 531

Query: 474 E 474
           E
Sbjct: 532 E 532



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 121/461 (26%), Positives = 204/461 (44%), Gaps = 47/461 (10%)

Query: 88  YSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG--CAPDAVSYTTIVSSI 145
           Y+         N  TY+ ++  L +    +    LL+E+ + G  C+ D   + T++ S 
Sbjct: 74  YAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDL--FITVIRSY 131

Query: 146 CKLGQVEEARELAMR---FGSGVSV--YNALINGLCKEHKIEEAFWLLCEMVDR-GIDPN 199
               + + A +  +R   FG   SV   N L+N L + ++      L      + G+ PN
Sbjct: 132 GLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPN 191

Query: 200 VITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWN 259
           V T + +I +LC   +VE +  +  +M   G  PN+ ++T++L GY+  G    A  ++ 
Sbjct: 192 VFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFG 251

Query: 260 RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAG 319
            +   G+LP+   Y+ L+ G    G   +AV V  +MEEN   PN  TY  +I G+ K  
Sbjct: 252 ELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKER 311

Query: 320 NLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT---- 375
               A  + N M+     PN      ++ VLC      +A  + EK+  +NC P+     
Sbjct: 312 KSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITS 371

Query: 376 ------------------------------VTFNTFIKGLCGCGRVDWAMKLLDQMKQYE 405
                                         +T+NT I G+C  G +  A +L D M +  
Sbjct: 372 TLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKG 431

Query: 406 CLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
           C+PN  TYN L+ G L+V + KE  ++V E+   G  LN  TY  ++ G+ + G   E  
Sbjct: 432 CVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELL 491

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRI 506
            +L  M+I    +D   +N+ +  +     VN    +L++I
Sbjct: 492 NILS-MIISSGAVDFKAWNLFVPHFV--SNVNEQANILEKI 529



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 163/400 (40%), Gaps = 71/400 (17%)

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           N  TY  II  L      E    +L ++   G N +   F ++++ Y L  R   A   +
Sbjct: 85  NYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTF 144

Query: 259 NRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA 318
            R+   G   +V + +TL++ L  N                    N  +   L+  ++K+
Sbjct: 145 LRIQTFGVRRSVRSLNTLLNALVQN--------------------NRFSSVHLLFKYSKS 184

Query: 319 GNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTF 378
                           G  PNV     ++K LC+ N    A  + ++M      PN VT+
Sbjct: 185 --------------KFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTY 230

Query: 379 NTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEK 438
            T + G    G +  A ++  ++  +  LP+ TTY  L+DG ++  R  +A +++ E+E+
Sbjct: 231 TTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEE 290

Query: 439 CGIQLNIVTYNTILHGVCRA-----------------------------------GMVVE 463
            G++ N +TY  I+ G C+                                    G V E
Sbjct: 291 NGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKE 350

Query: 464 AFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLL 523
           A ++  K+L +    D    + +I+  CK+G +  A +L +    G      +++Y +L+
Sbjct: 351 ACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGT--ISSLLTYNTLI 408

Query: 524 WGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFS 563
            G+C  G + EA      ML +G  PN  T+N+L++    
Sbjct: 409 AGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLK 448


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 249/516 (48%), Gaps = 23/516 (4%)

Query: 10  EIDGVQY-LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIR-EFGLKPTVKI 67
           + D   Y  +   +  G+      F ++I ++   G   +A++ F R+  EFG +PT  +
Sbjct: 118 DADAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFV 177

Query: 68  YNHILDALLAEN-RFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEM 126
           YN +L  L+A      +   +Y+ M   G  PN  TYN+L+  LCK      A KL  EM
Sbjct: 178 YNAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEM 237

Query: 127 GNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKI 181
            ++G  P+  ++T ++SS+C  GQ++EA  L               YNA ++GLCK  ++
Sbjct: 238 ISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRV 297

Query: 182 EEAFWLLCEMVDRG-IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRG-CNPNIHSFT 239
           +EA   L  +   G     +  YS +I  L   G  E       ++  +   +P+I  +T
Sbjct: 298 DEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYT 357

Query: 240 SLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEEN 299
            +++G    GRT++A   ++ M  +GF P+   Y+TL+  LC  G +D A S+  +M  N
Sbjct: 358 IMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRN 417

Query: 300 SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQA 359
           +   ++ TY+ +I G  K   +  A Q+++ M+  GC P+V+ Y  ++  L + +   +A
Sbjct: 418 NVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEA 477

Query: 360 HSLIEKMAFENCPP-------------NTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYEC 406
             L  KM   N P              ++ T    ++ +C  G+V  A KLL  +     
Sbjct: 478 RMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGV 537

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
           +P++ TYN LL+GL +V  +  A  L  E++  G  L+ +TY T++  + RA    +A  
Sbjct: 538 VPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALT 597

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQL 502
           L   +L  G       +N ++ + C+  K++ AI L
Sbjct: 598 LFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINL 633



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 259/543 (47%), Gaps = 30/543 (5%)

Query: 48  QALKMFYRIREF---GLKPTVKI----YNHILDALLAENRFSMINPIYSNMKRDGMEPNV 100
            AL    RIR F    L P ++        ++  LLA +  + +    ++ +  G++P  
Sbjct: 80  DALPPASRIRLFLFSALTPRLRSPLLHSRAVVPILLATDADAAMYDAIADAQAAGLQPPT 139

Query: 101 FTYNILLKALCKNNRVDGAYKLLVEM-GNKGCAPDAVSYTTIVSS-ICKLGQVEEARELA 158
             +  L+ A     R   A +    M G  GC P    Y  ++   +   G V  A  L 
Sbjct: 140 AAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALY 199

Query: 159 MRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDV 213
            R  +       + YN LI+GLCK     +A  L  EM+ RGI PNV T++ ++SS+C+ 
Sbjct: 200 NRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNA 259

Query: 214 GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREG-FLPNVVA 272
           G ++ +  +L  M  +GC P+  ++ + L G    GR  EA +    +   G F+  +  
Sbjct: 260 GQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKG 319

Query: 273 YSTLIHGLCSNGSMDEAVSVSYQ-MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRM 331
           YS LI GL   G  +E      + +E+    P++  Y+ +I G A+AG    A   ++ M
Sbjct: 320 YSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEM 379

Query: 332 ISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRV 391
              G +P+   Y  ++K LC       A SL+ +M   N   +  T+ T I GLC    V
Sbjct: 380 KEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLV 439

Query: 392 DWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIE---------KCGIQ 442
           D AM++ D M +  C P++ TYN L+DGL R +R++EA  L  ++E         +  + 
Sbjct: 440 DEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLG 499

Query: 443 LNIV----TYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNN 498
            N V    T   ++  +C++G V++A++LL  ++  G   D +T+N ++   CK   ++ 
Sbjct: 500 ANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDG 559

Query: 499 AIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLV 558
           A++L   ++  G +  D I+Y +L+  +  +    +A    Q +L+ G  P+   +N ++
Sbjct: 560 ALRLFRELQVKG-FPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMM 618

Query: 559 RSL 561
           RSL
Sbjct: 619 RSL 621



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 175/338 (51%), Gaps = 7/338 (2%)

Query: 230 GCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE-GFLPNVVAYSTLIHGL-CSNGSMD 287
           G  P   +F +L+  +   GR HEA + ++RM  E G  P    Y+ ++  L  S G++ 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 288 EAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMV 347
            A+++  +M    C PN  TY+ LI G  K G  + A ++++ MIS G +PNV  +T ++
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILL 253

Query: 348 KVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECL 407
             +C      +A +L+  M  + CPP+ VT+N F+ GLC  GRVD A++ L+ ++     
Sbjct: 254 SSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTF 313

Query: 408 P-NITTYNELLDGLLRVNRVKEAFELVTEI-EKCGIQLNIVTYNTILHGVCRAGMVVEAF 465
              +  Y+ L+DGL    R +E F+   E+ E+  +  +IV Y  ++ G   AG   +AF
Sbjct: 314 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAF 373

Query: 466 QLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLL-DRIRGGGEWNPDIISYTSLLW 524
               +M  +G   D   +N ++ A C  G ++ A  L+ + +R       DI +YT+++ 
Sbjct: 374 AFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVL--DIHTYTTMII 431

Query: 525 GICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLF 562
           G+C    + EA      M+  G  P+  T+NVL+  L+
Sbjct: 432 GLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLY 469



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 219/481 (45%), Gaps = 23/481 (4%)

Query: 120 YKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMR----FGSGVS--VYNALIN 173
           Y  + +    G  P   ++  ++ +    G+  EA E   R    FG   +  VYNA++ 
Sbjct: 124 YDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLR 183

Query: 174 GLCKEH-KIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            L      +  A  L   MV  G  PN  TY+ +I  LC  G    +L +  +M  RG  
Sbjct: 184 VLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGIT 243

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSV 292
           PN+ + T LL      G+  EA +L + M  +G  P+ V Y+  + GLC  G +DEA+  
Sbjct: 244 PNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIER 303

Query: 293 SYQMEEN-SCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNG-CSPNVVAYTCMVKVL 350
              +    +    +  YS LIDG   AG      Q +  ++     SP++V YT M++  
Sbjct: 304 LEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGC 363

Query: 351 CQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNI 410
            +    + A +  ++M  +   P+T  +NT +K LC  G +D A  L+ +M +   + +I
Sbjct: 364 AEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDI 423

Query: 411 TTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGK 470
            TY  ++ GL +   V EA ++   + + G   +++TYN ++ G+ RA  + EA  L  K
Sbjct: 424 HTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYK 483

Query: 471 MLIEGTK-------------LDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDII 517
           M +                  D+ T   ++ + C+ G+V  A +LL  I   G   PD++
Sbjct: 484 MEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVV-PDVV 542

Query: 518 SYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDI 577
           +Y +LL G+C    +  A    +++  +G   +  T+  L+ SL     +   + +  DI
Sbjct: 543 TYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDI 602

Query: 578 M 578
           +
Sbjct: 603 L 603



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/451 (22%), Positives = 198/451 (43%), Gaps = 58/451 (12%)

Query: 10  EIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG-LKPTVKIY 68
           ++   + LL  M+ +G    E  + + ++   + G  ++A++    +R  G     +K Y
Sbjct: 261 QLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGY 320

Query: 69  NHILDALLAENRFSMINPIYSN-MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMG 127
           + ++D L    R+      Y   +++  + P++  Y I+++   +  R + A+    EM 
Sbjct: 321 SCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMK 380

Query: 128 NKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIE 182
            KG  PD   Y T++ ++C  G ++ AR L            +  Y  +I GLCKE  ++
Sbjct: 381 EKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVD 440

Query: 183 EAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNI------- 235
           EA  +   MV+ G  P+V+TY+ +I  L     +E +  +  +M V G NP++       
Sbjct: 441 EAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEV-GNNPSLFLRLTLG 499

Query: 236 -------HSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDE 288
                   +   L++     G+  +A  L   +I  G +P+VV Y+TL++GLC   ++D 
Sbjct: 500 ANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDG 559

Query: 289 AVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVK 348
           A+ +  +++    P +  TY  LID   +A     A  ++  ++ +G +P++  Y  M++
Sbjct: 560 ALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMR 619

Query: 349 VLCQNNMFHQA---------------------------------HSLIE---KMAFENCP 372
            LC+     QA                                 H  +    K+  E   
Sbjct: 620 SLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGS 679

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
            N+  +  ++ GL   GR++ A+K+   +++
Sbjct: 680 VNSCPYTIWLIGLIQAGRIEDALKIFHILEE 710



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/402 (21%), Positives = 156/402 (38%), Gaps = 74/402 (18%)

Query: 12  DGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHI 71
           +G Q  ++ ++   VS    ++  +I      G    A   F  ++E G  P    YN +
Sbjct: 335 EGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTL 394

Query: 72  LDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGC 131
           L AL           + S M R+ +  ++ TY  ++  LCK   VD A ++   M   GC
Sbjct: 395 LKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGC 454

Query: 132 APDAVSYTTIVSSICKLGQVEEARELAMRFGSG--------------------------- 164
            P  ++Y  ++  + +  ++EEAR L  +   G                           
Sbjct: 455 HPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVE 514

Query: 165 --------------------------VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDP 198
                                     V  YN L+NGLCK   ++ A  L  E+  +G   
Sbjct: 515 SMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPL 574

Query: 199 NVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLW 258
           + ITY T+I SL        +L +   +   G  P++  + S+++      +  +A +LW
Sbjct: 575 DEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLW 634

Query: 259 NRMIREGFLPNVVAYSTLIHGL---CSNGSMDEAVSVSYQMEE-----NSCPPNVTTYSA 310
              +   +  N++A   +I         G + EAV    ++++     NSCP     Y+ 
Sbjct: 635 FDHLPRKY--NLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCP-----YTI 687

Query: 311 LIDGFAKAGNLLGASQIWNRM------ISNGCSPNVVAYTCM 346
            + G  +AG +  A +I++ +      I+  C  ++  Y C+
Sbjct: 688 WLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCL 729



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/388 (19%), Positives = 146/388 (37%), Gaps = 93/388 (23%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           +++ L +  ++DG + L+ +M    V      + ++I    +  L ++A+++F  + E G
Sbjct: 394 LLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVG 453

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMK------------------RD-------- 94
             P+V  YN ++D L   +R      ++  M+                  RD        
Sbjct: 454 CHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLV 513

Query: 95  ----------------------GMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCA 132
                                 G+ P+V TYN LL  LCK   +DGA +L  E+  KG  
Sbjct: 514 ESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFP 573

Query: 133 PDAVSYTTIVSSICKLGQVEEARELAMRF-----GSGVSVYNALINGLCKEHKIEEAFWL 187
            D ++Y T++ S+ +  +  +A  L            + +YN+++  LC+  K+ +A  L
Sbjct: 574 LDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINL 633

Query: 188 LCEMVDRGIDPNVITYSTIISS-------------------------------------- 209
             + + R    N++    +ISS                                      
Sbjct: 634 WFDHLPRKY--NLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIG 691

Query: 210 LCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPN 269
           L   G +E +L I   +   G +        L K   L G    A D+    +++GF   
Sbjct: 692 LIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFTMR 751

Query: 270 VVAYSTLIHGLCSNGSMDEAVSVSYQME 297
               + L+  LC +    +A +++++M 
Sbjct: 752 RYVGNRLLCSLCIHHRRKDAQALAWRMH 779



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 54/274 (19%), Positives = 119/274 (43%), Gaps = 10/274 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           ++E + +  ++     LL+ +   GV      + +++N   +V   + AL++F  ++  G
Sbjct: 512 LVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKG 571

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
                  Y  ++D+LL  +R++    ++ ++   G  P++  YN ++++LC+  ++  A 
Sbjct: 572 FPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAI 631

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSI-------CKLGQVEEARELAMRFGSGVSV-YNALI 172
            L  +   +    + ++   ++SS        C    V E  ++   +GS  S  Y   +
Sbjct: 632 NLWFDHLPRKY--NLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWL 689

Query: 173 NGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCN 232
            GL +  +IE+A  +   + + GID        +   LC  GN+  ++ ++     +G  
Sbjct: 690 IGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVMLYTLKKGFT 749

Query: 233 PNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGF 266
              +    LL    +  R  +A  L  RM   G+
Sbjct: 750 MRRYVGNRLLCSLCIHHRRKDAQALAWRMHLVGY 783



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 1/107 (0%)

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGG-MQ 533
           G +     F  +I+A+   G+ + A++   R+ G     P    Y ++L  +  SGG + 
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVP 193

Query: 534 EAFIYLQKMLNEGICPNFATWNVLVRSLFSNLGHLGPVYILDDIMAN 580
            A     +M+  G  PN AT+NVL+  L      +  + + D++++ 
Sbjct: 194 LALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISR 240


>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
 gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
          Length = 796

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 267/545 (48%), Gaps = 15/545 (2%)

Query: 31  GVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALLAEN-RFSMINPIYS 89
             + ++++ + R G    A+ +F R+ + G++P +  YN +L      +  +  +  +  
Sbjct: 186 SAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLVD 245

Query: 90  NMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLG 149
           +MK DG+E + +TYN L+    +      A ++  EM   G  PD V++ +++    K  
Sbjct: 246 SMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKAR 305

Query: 150 QVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYS 204
           + EEA  +  +  +      V  YN+LI+   K+  +EEA  L  EM  RG+ P+V+TY+
Sbjct: 306 RHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 365

Query: 205 TIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIRE 264
           T+IS L  +G ++ +L    +M   GC+PN+ ++ +L+K + + G+  E   +++ +   
Sbjct: 366 TLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSA 425

Query: 265 GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           G++P+VV ++TL+     NG   E   V  +M++    P   TY +LI  +++ G    A
Sbjct: 426 GYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQA 485

Query: 325 SQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKG 384
            +I+ RMI  G  P++  Y  ++  L +   + QA  L  +M   +C P+ +++++ +  
Sbjct: 486 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHA 545

Query: 385 LCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLL----RVNRVKEAFELVTEIEKCG 440
                ++D    L + +      P    +N L+  L+    +VN + E  +   E+ +  
Sbjct: 546 YANAKKLDKMKALSEDIYAQRIEP----HNWLVKTLVLVNNKVNSLSETEKAFQELRRRR 601

Query: 441 IQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAI 500
             L+I   N ++    +  MV +  ++L  M        A T+N +++ Y + G      
Sbjct: 602 CSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCE 661

Query: 501 QLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRS 560
            +L  I+  G   PD  SY ++++     G M+EA     +M   G+ P+  T+N+ ++S
Sbjct: 662 AILTEIKSSG-MRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS 720

Query: 561 LFSNL 565
             +NL
Sbjct: 721 YVANL 725



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 248/533 (46%), Gaps = 10/533 (1%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L+  MK +G+      + ++I+  RR GL  +A +MF  ++  G +P    +N +LD   
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAV 136
              R      +   M+  G  P+V TYN L+ A  K+  ++ A +L  EM  +G  PD V
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362

Query: 137 SYTTIVSSICKLGQVEEARELA-----MRFG--SGVSVYNALINGLCKEHKIEEAFWLLC 189
           +YTT++S + ++G+++ A  LA     +R G    +  YNALI       K  E   +  
Sbjct: 363 TYTTLISGLDRIGKIDAA--LATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFD 420

Query: 190 EMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           ++   G  P+V+T++T+++     G      G+  +M   G  P   ++ SL+  Y   G
Sbjct: 421 DLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCG 480

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYS 309
              +A +++ RMI  G  P++  Y+ ++  L   G   +A  +  +ME+  C P+  +YS
Sbjct: 481 LFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYS 540

Query: 310 ALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFE 369
           +L+  +A A  L     +   + +    P+      +V V  + N   +     +++   
Sbjct: 541 SLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRR 600

Query: 370 NCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEA 429
            C  +    N  +        V    ++L  MK+     +  TYN L+    R+   ++ 
Sbjct: 601 RCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKC 660

Query: 430 FELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYA 489
             ++TEI+  G++ +  +YNT+++   R G + EA +L  +M   G K D +T+NI I +
Sbjct: 661 EAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKS 720

Query: 490 YCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKM 542
           Y        AI L+  +   G   P+  +Y S+L G C  G M EA  +L  +
Sbjct: 721 YVANLMFEEAIDLVRYLVAQG-CKPNERTYNSILEGYCRHGRMVEAKSFLSNL 772



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 265/596 (44%), Gaps = 89/596 (14%)

Query: 63  PTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK---------- 112
           P    Y  ++       RF     ++  M   G++P + TYN++L    K          
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242

Query: 113 ---NNRVDG-----------------------AYKLLVEMGNKGCAPDAVSYTTIVSSIC 146
              + + DG                       A ++  EM   G  PD V++ +++    
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302

Query: 147 KLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVI 201
           K  + EEA  +  +  +      V  YN+LI+   K+  +EEA  L  EM  RG+ P+V+
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362

Query: 202 TYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRM 261
           TY+T+IS L  +G ++ +L    +M   GC+PN+ ++ +L+K + + G+  E   +++ +
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422

Query: 262 IREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
              G++P+VV ++TL+     NG   E   V  +M++    P   TY +LI  +++ G  
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLF 482

Query: 322 LGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTF 381
             A +I+ RMI  G  P++  Y  ++  L +   + QA  L  +M   +C P+ +++++ 
Sbjct: 483 DQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSL 542

Query: 382 IKGLCGCGRVD------------------WAMKLL-----------------DQMKQYEC 406
           +       ++D                  W +K L                  ++++  C
Sbjct: 543 LHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRC 602

Query: 407 LPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQ 466
             +I   N ++    +   VK+  E++T +++  I  +  TYN+++H   R G   +   
Sbjct: 603 SLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEA 662

Query: 467 LLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGI 526
           +L ++   G + D  ++N +IYAY ++G++  A +L   ++  G   PDI++Y   +   
Sbjct: 663 ILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG-VKPDIVTYNIFIKSY 721

Query: 527 CNSGGMQEAFIYLQKMLNEGICPNFATWN------------VLVRSLFSNLGHLGP 570
             +   +EA   ++ ++ +G  PN  T+N            V  +S  SNL  + P
Sbjct: 722 VANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNLPKIYP 777



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 198/435 (45%), Gaps = 21/435 (4%)

Query: 17  LLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL 76
           L Q+M+  G+      + ++I+   R+G  + AL  +  +   G  P +  YN ++    
Sbjct: 348 LKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHG 407

Query: 77  AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKN---NRVDGAYKLLVEMGNKGCAP 133
              +F+ +  ++ +++  G  P+V T+N LL    +N   + V G +K   EM   G  P
Sbjct: 408 VRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFK---EMKKAGYIP 464

Query: 134 DAVSYTTIVSSICKLGQVEEARELAMRFGSG-----VSVYNALINGLCKEHKIEEAFWLL 188
           +  +Y +++SS  + G  ++A E+  R         +S YNA+++ L +  +  +A  L 
Sbjct: 465 ERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLF 524

Query: 189 CEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLG 248
            EM DR   P+ ++YS+++ +  +   ++    +   ++ +   P+     +L+   L+ 
Sbjct: 525 AEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLV---LVN 581

Query: 249 GRTHEASDLWN-----RMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPP 303
            + +  S+        R  R     NV+     I+G   N  + +   V   M+ENS   
Sbjct: 582 NKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYG--KNKMVKKVEEVLTLMKENSINH 639

Query: 304 NVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLI 363
           +  TY++L+  +++ G+      I   + S+G  P+  +Y  ++    +     +A  L 
Sbjct: 640 SAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLF 699

Query: 364 EKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRV 423
            +M      P+ VT+N FIK        + A+ L+  +    C PN  TYN +L+G  R 
Sbjct: 700 SEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRH 759

Query: 424 NRVKEAFELVTEIEK 438
            R+ EA   ++ + K
Sbjct: 760 GRMVEAKSFLSNLPK 774



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 4/225 (1%)

Query: 337 SPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWA-- 394
           +P+  AYT +V    +   F  A ++  +M      P  VT+N  +        V W   
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMS-VPWKEV 240

Query: 395 MKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHG 454
           + L+D MK+     +  TYN L+    R    +EA ++  E++  G + + VT+N++L  
Sbjct: 241 VVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDV 300

Query: 455 VCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNP 514
             +A    EA  +L KM   G     +T+N +I AY K G +  A++L   +   G   P
Sbjct: 301 YGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRG-MKP 359

Query: 515 DIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVR 559
           D+++YT+L+ G+   G +  A     +M+  G  PN  T+N L++
Sbjct: 360 DVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIK 404



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/354 (20%), Positives = 144/354 (40%), Gaps = 68/354 (19%)

Query: 6   GEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQAL--------------- 50
           G   E+ GV    ++MK  G       ++S+I+SY R GL +QA+               
Sbjct: 445 GLDSEVSGV---FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDI 501

Query: 51  --------------------KMFYRIREFGLKPTVKIYNHILDALLAENRFSMINPIYSN 90
                               K+F  + +   KP    Y+ +L A     +   +  +  +
Sbjct: 502 STYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSED 561

Query: 91  MKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQ 150
           +    +EP+ +    L+    K N +    K   E+  + C+ D                
Sbjct: 562 IYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLD---------------- 605

Query: 151 VEEARELAMRFGSGVSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSL 210
                         ++V NA+++   K   +++   +L  M +  I+ +  TY++++   
Sbjct: 606 --------------INVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMY 651

Query: 211 CDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNV 270
             +G+ E    IL ++   G  P+ +S+ +++  Y   G+  EAS L++ M   G  P++
Sbjct: 652 SRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDI 711

Query: 271 VAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNLLGA 324
           V Y+  I    +N   +EA+ +   +    C PN  TY+++++G+ + G ++ A
Sbjct: 712 VTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEA 765



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 7/180 (3%)

Query: 1   MIEKLGEKCEIDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFG 60
           M+   G+   +  V+ +L  MK   ++ S   + S+++ Y R+G  E+   +   I+  G
Sbjct: 612 MVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSG 671

Query: 61  LKPTVKIYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAY 120
           ++P    YN ++ A   + +    + ++S MK  G++P++ TYNI +K+   N   + A 
Sbjct: 672 MRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAI 731

Query: 121 KLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSGVSVYNALINGLCKEHK 180
            L+  +  +GC P+  +Y +I+   C+ G++ EA+       S +S    +  G+ KE K
Sbjct: 732 DLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAK-------SFLSNLPKIYPGISKEEK 784


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 194/370 (52%), Gaps = 4/370 (1%)

Query: 196 IDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
           + P V TY  +I   C  G ++     LG +  +G       F  LLKG     RT +A 
Sbjct: 86  VTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAM 145

Query: 256 DLWNRMIRE-GFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENS--CPPNVTTYSALI 312
           D+  R + E   +PNV +++ ++ GLC      EA+ + + M ++   C PNV +YS +I
Sbjct: 146 DIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVI 205

Query: 313 DGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCP 372
           DG  K G+   A   +  M+     PNVV Y+ ++  LC+     +A  + ++M      
Sbjct: 206 DGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVT 265

Query: 373 PNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFEL 432
           PN  T+ + + G C  G++  A+K L++M      PN+ TY+  +D L +  R  EA ++
Sbjct: 266 PNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKI 325

Query: 433 VTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCK 492
              + K G++ +I TY+++LHG    G +VE   L   M+    + D   FN +IYA  K
Sbjct: 326 FDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAK 385

Query: 493 QGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFA 552
           QGKV+ A+ +  ++R  G   P+ ++Y++L+ G C    M+ A    Q+M++ G+ PNF 
Sbjct: 386 QGKVDEAMLVFSKMRQQG-LKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFI 444

Query: 553 TWNVLVRSLF 562
           T+N++++ LF
Sbjct: 445 TYNIMLQGLF 454



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 227/462 (49%), Gaps = 18/462 (3%)

Query: 29  SEGVFISVINSYRRVGL--AEQALKMFYRIREFGLKPTVKIYNHILDALLAENRFSMINP 86
           SEG     I    RVG   AE AL +F  +   G+   ++  N  L  +  +N  + ++ 
Sbjct: 19  SEGT----IQDRARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSR 74

Query: 87  IYSNMKRDG---MEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSYTTIVS 143
            ++ M R G   + P V TY IL+   C   R+D  +  L  +  KG   + + +  ++ 
Sbjct: 75  -FNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLK 133

Query: 144 SICKLGQVEEARELAMRFGSGVSV------YNALINGLCKEHKIEEAFWLLCEMVDRGID 197
            +C   + ++A ++ +R  + +S       +  ++ GLC E++ +EA  LL  M D G  
Sbjct: 134 GLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGG 193

Query: 198 --PNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEAS 255
             PNV++YST+I  L   G+ + +     +M  R   PN+  ++S++     G    +A 
Sbjct: 194 CLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAM 253

Query: 256 DLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGF 315
           ++ +RM++ G  PN   Y++L+HG CS+G + EA+    +M  N   PNV TYS+ +D  
Sbjct: 254 EVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYL 313

Query: 316 AKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNT 375
            K G    A +I++ M+  G  P++  Y+ ++          + H L + M   +  P+ 
Sbjct: 314 CKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDH 373

Query: 376 VTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
             FNT I      G+VD AM +  +M+Q    PN  TY+ L++G  ++ R++ A  L  E
Sbjct: 374 YVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQE 433

Query: 436 IEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTK 477
           +   G+  N +TYN +L G+ R G    A +   +++  G K
Sbjct: 434 MVSNGVSPNFITYNIMLQGLFRTGRTATAKEFYVQIIKSGKK 475



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 126/251 (50%), Gaps = 7/251 (2%)

Query: 320 NLLGASQIWNRMISNGCS---PNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTV 376
           N   A   +NRM   G S   P V  Y  ++   C         + +  +  +      +
Sbjct: 67  NPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPI 126

Query: 377 TFNTFIKGLCGCGRVDWAMKL-LDQMKQYECLPNITTYNELLDGLLRVNRVKEAFELVTE 435
            FN  +KGLC   R D AM + L  M +  C+PN+ ++  +L GL   NR +EA EL+  
Sbjct: 127 IFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHM 186

Query: 436 I--EKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQ 493
           +  +  G   N+V+Y+T++ G+ + G   +A+    +ML      + + ++ II A CK 
Sbjct: 187 MADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKG 246

Query: 494 GKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFAT 553
             ++ A+++ DR+   G   P+  +YTSL+ G C+SG + EA  +L+KM + G+ PN  T
Sbjct: 247 QAMDKAMEVHDRMVKNG-VTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVT 305

Query: 554 WNVLVRSLFSN 564
           ++  +  L  N
Sbjct: 306 YSSFMDYLCKN 316



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 9/216 (4%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    +  +M   GV+ +   + S+++ +   G   +A+K   ++   G++P V  Y+ 
Sbjct: 249 MDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSS 308

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
            +D L    R +    I+ +M + G++P++ TY+ LL        +   + L   M    
Sbjct: 309 FMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSD 368

Query: 131 CAPDAVSYTTIVSSICKLGQVEEA-------RELAMRFGSGVSVYNALINGLCKEHKIEE 183
             PD   + T++ +  K G+V+EA       R+  ++       Y+ LING CK  ++E 
Sbjct: 369 MQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLK--PNCVTYSTLINGYCKITRMEN 426

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETS 219
           A  L  EMV  G+ PN ITY+ ++  L   G   T+
Sbjct: 427 ALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATA 462



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 70/144 (48%)

Query: 14  VQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILD 73
            + +   M   G+      + S+++ Y   G   +   +F  + +  ++P   ++N ++ 
Sbjct: 322 ARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIY 381

Query: 74  ALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAP 133
           A   + +      ++S M++ G++PN  TY+ L+   CK  R++ A  L  EM + G +P
Sbjct: 382 ASAKQGKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSP 441

Query: 134 DAVSYTTIVSSICKLGQVEEAREL 157
           + ++Y  ++  + + G+   A+E 
Sbjct: 442 NFITYNIMLQGLFRTGRTATAKEF 465


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 239/496 (48%), Gaps = 54/496 (10%)

Query: 67  IYNHILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCK-------------- 112
           I +  + A ++ NR      I++ MKR  ++PN+ T N L+ AL +              
Sbjct: 137 ILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIF 196

Query: 113 --------NNRVDGAYKLLVEMGNKGCAPDAVSYTTIVSSICKLGQVEEARELAMRFGSG 164
                    N++  A  L+ +M +  C PD  SY TI+  +                   
Sbjct: 197 TNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVL------------------- 237

Query: 165 VSVYNALINGLCKEHKIEEAFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILG 224
                     LC+  K +++   L E+++ G+ P+ ITY+TII   C  G VE +     
Sbjct: 238 ---------WLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRN 288

Query: 225 QMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNG 284
           +M  +   P++ +   LL+G    G    A  L+N  I +G   + V Y+T+I GLC  G
Sbjct: 289 KMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEG 348

Query: 285 SMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKA-GNLLGASQIWNRMISNGCSPNVVAY 343
             +EA  +  +MEE    P+  TY+A++   A A G +  A Q  N+M+     P++   
Sbjct: 349 RFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTC 408

Query: 344 TCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQ 403
             +++ LC   M   A  L      +    + VT+NT I GLC  GR + A  LL +M++
Sbjct: 409 NILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEE 468

Query: 404 YECL-PNITTYNELLDGLLRVNRVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVV 462
              L P+ TTYN ++ G  R  +V++AF+   ++ +   + ++ T N +L G+CR GM+V
Sbjct: 469 KNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLV 528

Query: 463 EAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSL 522
           +A +L    + +G  +DA+T+N II   CK+G+   A  LL  ++   +  PD  +Y ++
Sbjct: 529 KALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMK-EKKLGPDCYTYNAI 587

Query: 523 LWGICNSGGMQ-EAFI 537
           L  + ++G M+ E F+
Sbjct: 588 LCALADAGRMEAEEFM 603



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 215/428 (50%), Gaps = 25/428 (5%)

Query: 25  GVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNHILDALL------AE 78
            V  S+ +F +VI    +  L+E A+ +  ++++F   P    YN ILD L        +
Sbjct: 188 SVCLSKAIFTNVIKFGVKNKLSE-AIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTD 246

Query: 79  NRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKGCAPDAVSY 138
                +N +  +    G+ P+  TYN ++   C+  +V+ A++   +M  K   PD  + 
Sbjct: 247 QSIDKLNELLES----GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTC 302

Query: 139 TTIVSSICKLGQVEEARELAMRFGSGVS--------VYNALINGLCKEHKIEEAFWLLCE 190
             ++  +C  G ++ A +L   F + +S         YN +I+GLCKE + EEAF LL E
Sbjct: 303 NILLRGLCTEGMLDNALKL---FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAE 359

Query: 191 MVDRGIDPNVITYSTIISSLCDV-GNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGG 249
           M ++ + P+  TY+ I+ +L D  G VE +     +M  +   P++ +   LL+G    G
Sbjct: 360 MEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEG 419

Query: 250 RTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMDEAVSVSYQMEE-NSCPPNVTTY 308
               A  L+N  I +G   + V Y+T+I GLC  G  +EA  +  +MEE N   P+ TTY
Sbjct: 420 MLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTY 479

Query: 309 SALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAF 368
           + +I G+ + G +  A Q  N+M+     P++     +++ LC+  M  +A  L      
Sbjct: 480 NTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWIS 539

Query: 369 ENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLDGLLRVNRVKE 428
           +    + VT+NT I GLC  GR + A  LL +MK+ +  P+  TYN +L  L    R+ E
Sbjct: 540 KGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM-E 598

Query: 429 AFELVTEI 436
           A E +++I
Sbjct: 599 AEEFMSKI 606



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 169/327 (51%), Gaps = 4/327 (1%)

Query: 238 FTSLLKGYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIH--GLCSNGSMDEAVSVSYQ 295
           FT+++K + +  +  EA  L  +M      P+  +Y+T++    LC +G  D+++    +
Sbjct: 196 FTNVIK-FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNE 254

Query: 296 MEENSCPPNVTTYSALIDGFAKAGNLLGASQIWNRMISNGCSPNVVAYTCMVKVLCQNNM 355
           + E+   P+  TY+ +I G+ + G +  A Q  N+M+     P++     +++ LC   M
Sbjct: 255 LLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGM 314

Query: 356 FHQAHSLIEKMAFENCPPNTVTFNTFIKGLCGCGRVDWAMKLLDQMKQYECLPNITTYNE 415
              A  L      +    + VT+NT I GLC  GR + A  LL +M++ +  P+  TYN 
Sbjct: 315 LDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNA 374

Query: 416 LLDGLLRVN-RVKEAFELVTEIEKCGIQLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIE 474
           +L  L     +V++AF+   ++ +   + ++ T N +L G+C  GM+  A +L    + +
Sbjct: 375 ILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISK 434

Query: 475 GTKLDAITFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQE 534
           G  +DA+T+N II   CK+G+   A  LL  +       PD  +Y +++ G C  G +++
Sbjct: 435 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEK 494

Query: 535 AFIYLQKMLNEGICPNFATWNVLVRSL 561
           AF +  KM+ +   P+  T N+L+R L
Sbjct: 495 AFQFRNKMVEKSFKPDLFTCNILLRGL 521



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 46/353 (13%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           ID +  LL+     G+   +  + ++I+ Y R G  E+A +   ++ E   KP +   N 
Sbjct: 249 IDKLNELLES----GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNI 304

Query: 71  ILDALLAENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNKG 130
           +L  L  E        +++     G   +  TYN ++  LCK  R + A+ LL EM  K 
Sbjct: 305 LLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKK 364

Query: 131 CAPDAVSYTTIVSSICKL-GQVEEARELAMR----------------------------- 160
             PD  +Y  I+ ++    GQVE+A +   +                             
Sbjct: 365 LGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNA 424

Query: 161 ---FGSGVS--------VYNALINGLCKEHKIEEAFWLLCEMVDR-GIDPNVITYSTIIS 208
              F + +S         YN +I+GLCKE + EEAF LL EM ++ G+ P+  TY+TII 
Sbjct: 425 LKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIIL 484

Query: 209 SLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLKGYLLGGRTHEASDLWNRMIREGFLP 268
             C  G VE +     +M  +   P++ +   LL+G    G   +A  L+N  I +G   
Sbjct: 485 GYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAI 544

Query: 269 NVVAYSTLIHGLCSNGSMDEAVSVSYQMEENSCPPNVTTYSALIDGFAKAGNL 321
           + V Y+T+I GLC  G  +EA  +  +M+E    P+  TY+A++   A AG +
Sbjct: 545 DAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRM 597



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 7/284 (2%)

Query: 11  IDGVQYLLQQMKVEGVSCSEGVFISVINSYRRVGLAEQALKMFYRIREFGLKPTVKIYNH 70
           +D    L      +G +     + ++I+   + G  E+A  +   + E  L P    YN 
Sbjct: 315 LDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNA 374

Query: 71  ILDALL-AENRFSMINPIYSNMKRDGMEPNVFTYNILLKALCKNNRVDGAYKLLVEMGNK 129
           IL AL  AE +        + M     +P++FT NILL+ LC    +D A KL     +K
Sbjct: 375 ILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISK 434

Query: 130 GCAPDAVSYTTIVSSICKLGQVEEAREL--AMRFGSGV----SVYNALINGLCKEHKIEE 183
           G A DAV+Y TI+S +CK G+ EEA +L   M   +G+    + YN +I G C+E ++E+
Sbjct: 435 GKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEK 494

Query: 184 AFWLLCEMVDRGIDPNVITYSTIISSLCDVGNVETSLGILGQMFVRGCNPNIHSFTSLLK 243
           AF    +MV++   P++ T + ++  LC  G +  +L +      +G   +  ++ +++ 
Sbjct: 495 AFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIIS 554

Query: 244 GYLLGGRTHEASDLWNRMIREGFLPNVVAYSTLIHGLCSNGSMD 287
           G    GR  EA DL   M  +   P+   Y+ ++  L   G M+
Sbjct: 555 GLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 130/260 (50%), Gaps = 16/260 (6%)

Query: 324 ASQIWNRMISNGCSPNVVAYTCMVKVLCQNNMFHQAHSLIEKMAFENCPPNTVTFNTFIK 383
           A+QI+NRM      PN++    ++  L +     +    + K  F N     V       
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYP--SKPSVCLSKAIFTNVIKFGVK------ 205

Query: 384 GLCGCGRVDWAMKLLDQMKQYECLPNITTYNELLD--GLLRVNRVKEAFELVTEIEKCGI 441
                 ++  A+ L+ +MK + C P+  +YN +LD   L R  +  ++ + + E+ + G+
Sbjct: 206 -----NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGL 260

Query: 442 QLNIVTYNTILHGVCRAGMVVEAFQLLGKMLIEGTKLDAITFNIIIYAYCKQGKVNNAIQ 501
             + +TYNTI+HG CR G V +AFQ   KM+ +  K D  T NI++   C +G ++NA++
Sbjct: 261 VPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALK 320

Query: 502 LLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQKMLNEGICPNFATWNVLVRSL 561
           L +     G+   D ++Y +++ G+C  G  +EAF  L +M  + + P+  T+N ++ +L
Sbjct: 321 LFNTWISKGK-AIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCAL 379

Query: 562 FSNLGHLGPVYILDDIMANK 581
               G +   +   + M  K
Sbjct: 380 ADAEGQVEKAFQFRNKMVEK 399


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.138    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,963,542,490
Number of Sequences: 23463169
Number of extensions: 367792402
Number of successful extensions: 1091810
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8057
Number of HSP's successfully gapped in prelim test: 4683
Number of HSP's that attempted gapping in prelim test: 761207
Number of HSP's gapped (non-prelim): 95639
length of query: 581
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 433
effective length of database: 8,886,646,355
effective search space: 3847917871715
effective search space used: 3847917871715
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)